-- dump date 20140619_043626 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 441772000001 SEQ_END SEQ_END NC_009699.1 3995387 3995387 DR NC_009699.1; contig end 3995387..3995387 Clostridium botulinum F str. Langeland 441772000002 SEQ_END SEQ_END NC_009700.1 17531 17531 DR NC_009700.1; contig end 17531..17531 Clostridium botulinum F str. Langeland YP_001389370.1 CDS dnaA NC_009699.1 1 1338 D binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 1..1338 Clostridium botulinum F str. Langeland 5405561 YP_001389371.1 CDS dnaN NC_009699.1 1601 2704 D binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 1601..2704 Clostridium botulinum F str. Langeland 5405562 YP_001389372.1 CDS CLI_0003 NC_009699.1 2723 2929 D identified by match to protein family HMM PF01479; match to protein family HMM TIGR02988; S4 domain-containing protein 2723..2929 Clostridium botulinum F str. Langeland 5404647 YP_001389373.1 CDS recF NC_009699.1 3008 4102 D Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 3008..4102 Clostridium botulinum F str. Langeland 5403035 YP_001389374.1 CDS CLI_0005 NC_009699.1 4123 4386 D hypothetical protein 4123..4386 Clostridium botulinum F str. Langeland 5404582 YP_001389375.1 CDS gyrB NC_009699.1 4404 6317 D negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 4404..6317 Clostridium botulinum F str. Langeland 5403994 YP_001389376.1 CDS gyrA NC_009699.1 6343 8838 D negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 6343..8838 Clostridium botulinum F str. Langeland 5403029 YP_001389377.1 CDS CLI_0008 NC_009699.1 8935 9051 D identified by Glimmer3; hypothetical protein 8935..9051 Clostridium botulinum F str. Langeland 5405549 YP_001389378.1 CDS CLI_0019 NC_009699.1 14382 14804 D hypothetical protein 14382..14804 Clostridium botulinum F str. Langeland 5403355 YP_001389379.1 CDS CLI_0020 NC_009699.1 14820 15341 D identified by match to protein family HMM PF02829; match to protein family HMM PF08279; transcriptional regulator 14820..15341 Clostridium botulinum F str. Langeland 5401975 YP_001389380.1 CDS CLI_0021 NC_009699.1 15343 16506 D identified by match to protein family HMM PF00037; match to protein family HMM PF04015; (Fe-S)-binding protein 15343..16506 Clostridium botulinum F str. Langeland 5403463 YP_001389381.1 CDS CLI_0022 NC_009699.1 16511 19192 D identified by match to protein family HMM PF03699; hypothetical protein 16511..19192 Clostridium botulinum F str. Langeland 5402868 YP_001389382.1 CDS CLI_0023 NC_009699.1 19329 20105 D identified by match to protein family HMM PF03734; ErfK/YbiS/YcfS/YnhG family protein 19329..20105 Clostridium botulinum F str. Langeland 5403118 YP_001389383.1 CDS CLI_0024 NC_009699.1 20130 21527 D identified by match to protein family HMM PF01266; match to protein family HMM PF04324; oxidoreductase, FAD dependent 20130..21527 Clostridium botulinum F str. Langeland 5405191 YP_001389384.1 CDS CLI_0025 NC_009699.1 21544 21897 D identified by match to protein family HMM PF07892; hypothetical protein 21544..21897 Clostridium botulinum F str. Langeland 5404830 YP_001389385.1 CDS serS-1 NC_009699.1 22267 23547 D catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 22267..23547 Clostridium botulinum F str. Langeland 5401953 YP_001389386.1 CDS CLI_0031 NC_009699.1 24306 25442 D identified by Glimmer3; hypothetical protein 24306..25442 Clostridium botulinum F str. Langeland 5403616 YP_001389387.1 CDS psd NC_009699.1 25956 26843 R catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase complement(25956..26843) Clostridium botulinum F str. Langeland 5402186 YP_001389388.1 CDS CLI_0039 NC_009699.1 26946 28544 R identified by match to protein family HMM PF03109; hypothetical protein complement(26946..28544) Clostridium botulinum F str. Langeland 5402378 YP_001389389.1 CDS CLI_0040 NC_009699.1 28620 28940 R hypothetical protein complement(28620..28940) Clostridium botulinum F str. Langeland 5403635 YP_001389390.1 CDS CLI_0042 NC_009699.1 29334 30884 D identified by match to protein family HMM PF00158; match to protein family HMM PF02954; sensory box sigma-54 dependent transcriptional regulator 29334..30884 Clostridium botulinum F str. Langeland 5402721 YP_001389391.1 CDS megL NC_009699.1 31044 32246 D catalyzes the formation of methanethiol and 2-ocobutanoate from L-methionine; methionine gamma-lyase 31044..32246 Clostridium botulinum F str. Langeland 5403727 YP_001389392.1 CDS CLI_0044 NC_009699.1 32370 32807 D identified by match to protein family HMM PF00383; cytidine/deoxycytidylate deaminase family protein 32370..32807 Clostridium botulinum F str. Langeland 5404887 YP_001389393.1 CDS dnaX NC_009699.1 33452 35077 D catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 33452..35077 Clostridium botulinum F str. Langeland 5404462 YP_001389394.1 CDS CLI_0048 NC_009699.1 35142 35483 D identified by match to protein family HMM PF02575; match to protein family HMM TIGR00103; hypothetical protein 35142..35483 Clostridium botulinum F str. Langeland 5402486 YP_001389395.1 CDS recR NC_009699.1 35516 36112 D involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 35516..36112 Clostridium botulinum F str. Langeland 5404682 YP_001389396.1 CDS CLI_0050 NC_009699.1 36169 36432 D hypothetical protein 36169..36432 Clostridium botulinum F str. Langeland 5405324 YP_001389397.1 CDS bofA NC_009699.1 36582 36842 D identified by match to protein family HMM PF07441; match to protein family HMM TIGR02862; sigma-K factor processing regulatory protein BofA 36582..36842 Clostridium botulinum F str. Langeland 5404225 YP_001389398.1 CDS sfsA NC_009699.1 36993 37685 D Regulatory factor involved in maltose metabolism; sugar fermentation stimulation protein A 36993..37685 Clostridium botulinum F str. Langeland 5403058 YP_001389399.1 CDS CLI_0053 NC_009699.1 37741 38229 D identified by match to protein family HMM PF00293; NUDIX family hydrolase 37741..38229 Clostridium botulinum F str. Langeland 5402461 YP_001389400.1 CDS CLI_0054 NC_009699.1 38347 39069 D hypothetical protein 38347..39069 Clostridium botulinum F str. Langeland 5404594 YP_001389401.1 CDS CLI_0055 NC_009699.1 39203 39991 D identified by match to protein family HMM PF00037; (Fe-S)-binding protein 39203..39991 Clostridium botulinum F str. Langeland 5403117 YP_001389402.1 CDS CLI_0056 NC_009699.1 40010 40171 D hypothetical protein 40010..40171 Clostridium botulinum F str. Langeland 5402041 YP_001389403.1 CDS CLI_0057 NC_009699.1 40554 41258 D identified by match to protein family HMM PF00899; ThiF domain-containing protein 40554..41258 Clostridium botulinum F str. Langeland 5404836 YP_001389404.1 CDS CLI_0058 NC_009699.1 41341 42450 D identified by match to protein family HMM PF07690; major facilitator superfamily protein 41341..42450 Clostridium botulinum F str. Langeland 5405295 YP_001389405.1 CDS CLI_0059 NC_009699.1 42479 43423 D identified by match to protein family HMM PF00583; acetyltransferase 42479..43423 Clostridium botulinum F str. Langeland 5405384 YP_001389406.1 CDS CLI_0067 NC_009699.1 48889 49485 R identified by match to protein family HMM PF03167; uracil-DNA glycosylase complement(48889..49485) Clostridium botulinum F str. Langeland 5405443 YP_001389407.1 CDS CLI_0075 NC_009699.1 55481 56044 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 55481..56044 Clostridium botulinum F str. Langeland 5404284 YP_001389408.1 CDS CLI_0076 NC_009699.1 56041 57483 D hypothetical protein 56041..57483 Clostridium botulinum F str. Langeland 5403775 YP_001389411.1 CDS CLI_0097 NC_009699.1 70083 70826 D identified by match to protein family HMM PF00639; peptidil-prolyl isomerase family protein 70083..70826 Clostridium botulinum F str. Langeland 5404287 YP_001389412.1 CDS CLI_0103 NC_009699.1 76430 77173 D Modulates the activities of several enzymes which are inactive in their acetylated form; NAD-dependent deacetylase 76430..77173 Clostridium botulinum F str. Langeland 5404262 YP_001389413.1 CDS CLI_0105 NC_009699.1 77359 78267 R identified by match to protein family HMM PF02016; LD-carboxypeptidase family protein complement(77359..78267) Clostridium botulinum F str. Langeland 5403516 YP_001389414.1 CDS CLI_0106 NC_009699.1 78303 79244 R identified by match to protein family HMM PF01544; CorA family protein complement(78303..79244) Clostridium botulinum F str. Langeland 5402189 YP_001389415.1 CDS CLI_0107 NC_009699.1 79609 80112 D hypothetical protein 79609..80112 Clostridium botulinum F str. Langeland 5403732 YP_001389416.1 CDS CLI_0108 NC_009699.1 80117 81277 R amidohydrolase complement(80117..81277) Clostridium botulinum F str. Langeland 5404404 YP_001389417.1 CDS CLI_0109 NC_009699.1 81532 81744 D csfB protein-like protein 81532..81744 Clostridium botulinum F str. Langeland 5404440 YP_001389418.1 CDS CLI_0110 NC_009699.1 81723 83171 D identified by match to protein family HMM PF01276; match to protein family HMM PF03711; Orn/Lys/Arg decarboxylase 81723..83171 Clostridium botulinum F str. Langeland 5402477 YP_001389419.1 CDS CLI_0111 NC_009699.1 83195 83890 D identified by match to protein family HMM PF02223; thymidylate kinase 83195..83890 Clostridium botulinum F str. Langeland 5405420 YP_001389420.1 CDS CLI_0112 NC_009699.1 83971 84300 D identified by match to protein family HMM PF06153; hypothetical protein 83971..84300 Clostridium botulinum F str. Langeland 5404531 YP_001389421.1 CDS CLI_0113 NC_009699.1 84318 85262 D catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 84318..85262 Clostridium botulinum F str. Langeland 5404536 YP_001389422.1 CDS CLI_0114 NC_009699.1 85264 86178 D identified by match to protein family HMM PF04468; PSP1 domain-containing protein 85264..86178 Clostridium botulinum F str. Langeland 5405479 YP_001389423.1 CDS CLI_0115 NC_009699.1 86190 86393 D hypothetical protein 86190..86393 Clostridium botulinum F str. Langeland 5404838 YP_001389424.1 CDS CLI_0116 NC_009699.1 86475 86645 D identified by match to protein family HMM PF00037; ferredoxin, 4Fe-4S 86475..86645 Clostridium botulinum F str. Langeland 5403591 YP_001389425.1 CDS CLI_0117 NC_009699.1 86766 87506 D hypothetical protein 86766..87506 Clostridium botulinum F str. Langeland 5403913 YP_001389426.1 CDS CLI_0118 NC_009699.1 87526 88380 D identified by match to protein family HMM PF00590; match to protein family HMM TIGR00096; tetrapyrrole methylase family protein 87526..88380 Clostridium botulinum F str. Langeland 5403219 YP_001389427.1 CDS CLI_0119 NC_009699.1 88536 89639 D identified by match to protein family HMM PF00877; NlpC/P60 family protein 88536..89639 Clostridium botulinum F str. Langeland 5404401 YP_001389428.1 CDS CLI_0120 NC_009699.1 89739 89984 R identified by match to protein family HMM PF04014; match to protein family HMM TIGR01439; AbrB family transcriptional regulator complement(89739..89984) Clostridium botulinum F str. Langeland 5402091 YP_001389429.1 CDS CLI_0121 NC_009699.1 90790 91401 D identified by match to protein family HMM PF08876; hypothetical protein 90790..91401 Clostridium botulinum F str. Langeland 5402088 YP_001389430.1 CDS arcA-1 NC_009699.1 91823 93034 D identified by match to protein family HMM PF02274; match to protein family HMM TIGR01078; arginine deiminase 91823..93034 Clostridium botulinum F str. Langeland 5404385 YP_001389431.1 CDS ispF NC_009699.1 93120 93587 R catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase complement(93120..93587) Clostridium botulinum F str. Langeland 5402411 YP_001389432.1 CDS CLI_0124 NC_009699.1 93663 93995 R identified by Glimmer3; hypothetical protein complement(93663..93995) Clostridium botulinum F str. Langeland 5401873 YP_001389433.1 CDS CLI_0125 NC_009699.1 94323 95192 D identified by match to protein family HMM PF01522; polysaccharide deacetylase 94323..95192 Clostridium botulinum F str. Langeland 5404613 YP_001389434.1 CDS CLI_0126 NC_009699.1 95461 95703 R hypothetical protein complement(95461..95703) Clostridium botulinum F str. Langeland 5403670 YP_001389435.1 CDS spmA NC_009699.1 95823 96398 D identified by match to protein family HMM PF07670; spore maturation protein A 95823..96398 Clostridium botulinum F str. Langeland 5403277 YP_001389436.1 CDS CLI_0128 NC_009699.1 96411 96929 D identified by match to protein family HMM PF07670; spore maturation protein B 96411..96929 Clostridium botulinum F str. Langeland 5405526 YP_001389437.1 CDS CLI_0129 NC_009699.1 97174 98511 R identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein complement(97174..98511) Clostridium botulinum F str. Langeland 5401992 YP_001389438.1 CDS udgA NC_009699.1 98655 99227 D identified by match to protein family HMM PF03167; match to protein family HMM TIGR00758; uracil-DNA glycosylase 98655..99227 Clostridium botulinum F str. Langeland 5404552 YP_001389439.1 CDS CLI_0131 NC_009699.1 99256 99690 D identified by match to protein family HMM PF01047; MarR family transcriptional regulator 99256..99690 Clostridium botulinum F str. Langeland 5405066 YP_001389440.1 CDS metG NC_009699.1 100072 102009 D methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 100072..102009 Clostridium botulinum F str. Langeland 5402547 YP_001389441.1 CDS CLI_0133 NC_009699.1 102304 103809 D identified by match to protein family HMM PF04286; hypothetical protein 102304..103809 Clostridium botulinum F str. Langeland 5405186 YP_001389442.1 CDS CLI_0134 NC_009699.1 103960 104754 D identified by match to protein family HMM PF01026; match to protein family HMM TIGR00010; TatD family hydrolase 103960..104754 Clostridium botulinum F str. Langeland 5403801 YP_001389443.1 CDS CLI_0135 NC_009699.1 104982 106040 D identified by match to protein family HMM PF03990; match to protein family HMM PF06725; match to protein family HMM PF07501; hypothetical protein 104982..106040 Clostridium botulinum F str. Langeland 5402004 YP_001389444.1 CDS CLI_0136 NC_009699.1 106113 106658 D identified by match to protein family HMM PF01751; match to protein family HMM TIGR00334; primase-like protein 106113..106658 Clostridium botulinum F str. Langeland 5404928 YP_001389445.1 CDS ksgA NC_009699.1 106660 107487 D catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 106660..107487 Clostridium botulinum F str. Langeland 5402809 YP_001389446.1 CDS CLI_0138 NC_009699.1 107566 108795 D hypothetical protein 107566..108795 Clostridium botulinum F str. Langeland 5404205 YP_001389447.1 CDS CLI_0139 NC_009699.1 108952 109539 D hypothetical protein 108952..109539 Clostridium botulinum F str. Langeland 5402496 YP_001389448.1 CDS CLI_0140 NC_009699.1 109704 110537 D lipoprotein 109704..110537 Clostridium botulinum F str. Langeland 5404174 YP_001389449.1 CDS CLI_0141 NC_009699.1 110705 111766 D identified by match to protein family HMM TIGR01730; RND family marcrolide efflux protein 110705..111766 Clostridium botulinum F str. Langeland 5401842 YP_001389450.1 CDS CLI_0142 NC_009699.1 111777 112472 D identified by match to protein family HMM PF00005; macrolide efflux ABC transporter ATP-binding protein 111777..112472 Clostridium botulinum F str. Langeland 5404870 YP_001389451.1 CDS CLI_0143 NC_009699.1 112469 113677 D identified by match to protein family HMM PF02687; macrolide efflux ABC transporter permease 112469..113677 Clostridium botulinum F str. Langeland 5404489 YP_001389452.1 CDS CLI_0144 NC_009699.1 113759 114601 D MRP protein-like protein 113759..114601 Clostridium botulinum F str. Langeland 5404392 YP_001389453.1 CDS CLI_0145 NC_009699.1 114738 114929 D identified by match to protein family HMM PF00037; (Fe-S)-binding protein 114738..114929 Clostridium botulinum F str. Langeland 5405082 YP_001389454.1 CDS CLI_0146 NC_009699.1 115375 115551 R identified by Glimmer3; hypothetical protein complement(115375..115551) Clostridium botulinum F str. Langeland 5405558 YP_001389455.1 CDS CLI_0147 NC_009699.1 115629 116699 D identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254; diguanylate cyclase 115629..116699 Clostridium botulinum F str. Langeland 5404575 YP_001389456.1 CDS CLI_0148 NC_009699.1 116756 117484 D identified by match to protein family HMM PF02308; mgtC family protein 116756..117484 Clostridium botulinum F str. Langeland 5404991 YP_001389457.1 CDS nrdD NC_009699.1 117774 119915 D Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase 117774..119915 Clostridium botulinum F str. Langeland 5402974 YP_001389458.1 CDS nrdG NC_009699.1 119932 120456 D identified by match to protein family HMM TIGR02491; anaerobic ribonucleoside-triphosphate reductase activating protein 119932..120456 Clostridium botulinum F str. Langeland 5402917 YP_001389459.1 CDS CLI_0151 NC_009699.1 120982 121656 R hypothetical protein complement(120982..121656) Clostridium botulinum F str. Langeland 5404742 YP_001389460.1 CDS CLI_0152 NC_009699.1 121658 121996 R identified by match to protein family HMM PF03551; PadR family transcriptional regulator complement(121658..121996) Clostridium botulinum F str. Langeland 5404848 YP_001389461.1 CDS CLI_0153 NC_009699.1 122117 122755 R zinc-dependent hydrolase complement(122117..122755) Clostridium botulinum F str. Langeland 5405049 YP_001389462.1 CDS ileS NC_009699.1 123197 126313 D IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 2 subfamily; some organisms carry two different copies of this enzyme; in some organisms, the type 2 subfamily is associated with resistance to the antibiotic pseudomonic acid (mupirocin); isoleucyl-tRNA synthetase 123197..126313 Clostridium botulinum F str. Langeland 5403978 YP_001389463.1 CDS CLI_0155 NC_009699.1 126464 127462 D identified by match to protein family HMM PF00356; match to protein family HMM PF00532; LacI family transcriptional regulator 126464..127462 Clostridium botulinum F str. Langeland 5401863 YP_001389464.1 CDS CLI_0156 NC_009699.1 127678 131730 D hypothetical protein 127678..131730 Clostridium botulinum F str. Langeland 5403411 YP_001389465.1 CDS CLI_0157 NC_009699.1 131805 132872 D identified by match to protein family HMM PF00483; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 131805..132872 Clostridium botulinum F str. Langeland 5402309 YP_001389466.1 CDS CLI_0158 NC_009699.1 133208 134503 D identified by match to protein family HMM PF01969; match to protein family HMM TIGR00299; hypothetical protein 133208..134503 Clostridium botulinum F str. Langeland 5405419 YP_001389467.1 CDS CLI_0159 NC_009699.1 134508 135314 D identified by match to protein family HMM PF01171; match to protein family HMM PF06508; match to protein family HMM TIGR00268; hypothetical protein 134508..135314 Clostridium botulinum F str. Langeland 5403466 YP_001389468.1 CDS CLI_0160 NC_009699.1 135334 136080 D hypothetical protein 135334..136080 Clostridium botulinum F str. Langeland 5404649 YP_001389469.1 CDS CLI_0161 NC_009699.1 136305 137687 D identified by match to protein family HMM PF04055; radical SAM domain-containing protein 136305..137687 Clostridium botulinum F str. Langeland 5401932 YP_001389470.1 CDS CLI_0162 NC_009699.1 137874 139148 D identified by match to protein family HMM PF01547; sugar-binding protein 137874..139148 Clostridium botulinum F str. Langeland 5404907 YP_001389471.1 CDS CLI_0163 NC_009699.1 139250 140365 R identified by match to protein family HMM PF00534; mannosyltransferase complement(139250..140365) Clostridium botulinum F str. Langeland 5405262 YP_001389472.1 CDS CLI_0164 NC_009699.1 140531 141541 D identified by match to protein family HMM TIGR02906; spore coat protein 140531..141541 Clostridium botulinum F str. Langeland 5404355 YP_001389473.1 CDS CLI_0165 NC_009699.1 141556 141750 D identified by Glimmer3; hypothetical protein 141556..141750 Clostridium botulinum F str. Langeland 5402720 YP_001389474.1 CDS CLI_0166 NC_009699.1 141777 142544 D hypothetical protein 141777..142544 Clostridium botulinum F str. Langeland 5404363 YP_001389475.1 CDS CLI_0167 NC_009699.1 142557 143570 D identified by match to protein family HMM TIGR02906; spore coat protein 142557..143570 Clostridium botulinum F str. Langeland 5403057 YP_001389476.1 CDS CLI_0168 NC_009699.1 143924 145051 R identified by match to protein family HMM PF00534; glycoside hydrolase family protein complement(143924..145051) Clostridium botulinum F str. Langeland 5405046 YP_001389477.1 CDS cotS NC_009699.1 145168 146172 D identified by match to protein family HMM TIGR02906; spore coat protein CotS 145168..146172 Clostridium botulinum F str. Langeland 5404595 YP_001389478.1 CDS CLI_0170 NC_009699.1 146296 147198 D identified by match to protein family HMM PF05582; match to protein family HMM TIGR02855; peptidase family protein 146296..147198 Clostridium botulinum F str. Langeland 5404947 YP_001389479.1 CDS CLI_0171 NC_009699.1 147394 147630 D identified by match to protein family HMM PF06257; hypothetical protein 147394..147630 Clostridium botulinum F str. Langeland 5404412 YP_001389480.1 CDS CLI_0172 NC_009699.1 147733 149295 D identified by match to protein family HMM PF01476; LysM domain-containing protein 147733..149295 Clostridium botulinum F str. Langeland 5405038 YP_001389481.1 CDS CLI_0173 NC_009699.1 149592 149705 D identified by Glimmer3; hypothetical protein 149592..149705 Clostridium botulinum F str. Langeland 5405559 YP_001389482.1 CDS cphB NC_009699.1 149675 150475 D identified by match to protein family HMM PF03575; match to protein family HMM TIGR02069; cyanophycinase 149675..150475 Clostridium botulinum F str. Langeland 5403407 YP_001389483.1 CDS cphA NC_009699.1 150519 153140 D catalyze the formation of cyanophycin which may act to store excess nitrogen; cyanophycin synthetase 150519..153140 Clostridium botulinum F str. Langeland 5404535 YP_001389484.1 CDS ipk NC_009699.1 153233 154075 D An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 153233..154075 Clostridium botulinum F str. Langeland 5402216 YP_001389485.1 CDS CLI_0177 NC_009699.1 154437 154634 D identified by Glimmer3; hypothetical protein 154437..154634 Clostridium botulinum F str. Langeland 5404639 YP_001389486.1 CDS CLI_0178 NC_009699.1 154695 156155 D identified by match to protein family HMM PF03323; spore germination protein 154695..156155 Clostridium botulinum F str. Langeland 5404430 YP_001389487.1 CDS CLI_0179 NC_009699.1 156175 157272 D identified by match to protein family HMM PF03845; match to protein family HMM TIGR00912; spore germination protein 156175..157272 Clostridium botulinum F str. Langeland 5402230 YP_001389488.1 CDS CLI_0180 NC_009699.1 157322 158500 D identified by match to protein family HMM PF05504; match to protein family HMM TIGR02887; Ger(x)C family germination protein 157322..158500 Clostridium botulinum F str. Langeland 5404678 YP_001389489.1 CDS CLI_0181 NC_009699.1 158573 159205 D identified by match to protein family HMM TIGR02837; stage II sporulation protein R 158573..159205 Clostridium botulinum F str. Langeland 5401981 YP_001389490.1 CDS CLI_0182 NC_009699.1 159242 160483 R identified by match to protein family HMM PF04101; match to protein family HMM PF06925; hypothetical protein complement(159242..160483) Clostridium botulinum F str. Langeland 5405316 YP_001389491.1 CDS ypeB NC_009699.1 160856 162226 D identified by match to protein family HMM PF03413; match to protein family HMM TIGR02889; germination protein YpeB 160856..162226 Clostridium botulinum F str. Langeland 5402861 YP_001389492.1 CDS CLI_0184 NC_009699.1 162329 163309 D identified by match to protein family HMM PF02568; hypothetical protein 162329..163309 Clostridium botulinum F str. Langeland 5404776 YP_001389493.1 CDS CLI_0185 NC_009699.1 163334 163762 D identified by match to protein family HMM PF09148; hypothetical protein 163334..163762 Clostridium botulinum F str. Langeland 5404795 YP_001389494.1 CDS CLI_0186 NC_009699.1 163894 164193 D hypothetical protein 163894..164193 Clostridium botulinum F str. Langeland 5403427 YP_001389495.1 CDS pyrG NC_009699.1 164427 166028 D CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 164427..166028 Clostridium botulinum F str. Langeland 5403402 YP_001389496.1 CDS CLI_0188 NC_009699.1 166528 166872 D hypothetical protein 166528..166872 Clostridium botulinum F str. Langeland 5405223 YP_001389497.1 CDS rho NC_009699.1 167044 168489 D An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 167044..168489 Clostridium botulinum F str. Langeland 5404888 YP_001389498.1 CDS rpmE NC_009699.1 168529 168747 R identified by match to protein family HMM PF01197; match to protein family HMM TIGR00105; 50S ribosomal protein L31 complement(168529..168747) Clostridium botulinum F str. Langeland 5403929 YP_001389499.1 CDS tdk NC_009699.1 168974 169549 D catalyzes the formation of thymidine 5'-phosphate from thymidine; thymidine kinase 168974..169549 Clostridium botulinum F str. Langeland 5403454 YP_001389500.1 CDS CLI_0192 NC_009699.1 169566 170483 D identified by match to protein family HMM PF07136; hypothetical protein 169566..170483 Clostridium botulinum F str. Langeland 5403864 YP_001389501.1 CDS CLI_0193 NC_009699.1 170491 171342 D identified by match to protein family HMM PF05175; match to protein family HMM TIGR00536; match to protein family HMM TIGR03387; HemK family modification methylase 170491..171342 Clostridium botulinum F str. Langeland 5405254 YP_001389502.1 CDS prfA NC_009699.1 171424 172500 D recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 171424..172500 Clostridium botulinum F str. Langeland 5402520 YP_001389503.1 CDS CLI_0195 NC_009699.1 172528 173136 D hypothetical protein 172528..173136 Clostridium botulinum F str. Langeland 5402570 YP_001389504.1 CDS CLI_0196 NC_009699.1 173195 173914 D identified by match to protein family HMM PF02535; ZIP transporter family protein 173195..173914 Clostridium botulinum F str. Langeland 5402238 YP_001389505.1 CDS CLI_0197 NC_009699.1 173935 174990 D identified by match to protein family HMM PF01300; match to protein family HMM PF03481; match to protein family HMM TIGR00057; Sua5/YciO/YrdC/YwlC family protein 173935..174990 Clostridium botulinum F str. Langeland 5404773 YP_001389506.1 CDS CLI_0198 NC_009699.1 174999 175451 D identified by match to protein family HMM PF01451; low molecular weight protein tyrosine phosphatase 174999..175451 Clostridium botulinum F str. Langeland 5404350 YP_001389507.1 CDS rpiB NC_009699.1 175511 175948 D catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity; ribose-5-phosphate isomerase B 175511..175948 Clostridium botulinum F str. Langeland 5403406 YP_001389508.1 CDS upp NC_009699.1 175978 176607 D Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase 175978..176607 Clostridium botulinum F str. Langeland 5401856 YP_001389509.1 CDS CLI_0201 NC_009699.1 177113 177601 D identified by match to protein family HMM PF00383; cytidine/deoxycytidylate deaminase family protein 177113..177601 Clostridium botulinum F str. Langeland 5403887 YP_001389510.1 CDS tagO NC_009699.1 177709 178743 D identified by match to protein family HMM PF00953; UDP-GlcNAc:UDP-P GlcNAc 1-P transferase 177709..178743 Clostridium botulinum F str. Langeland 5403677 YP_001389511.1 CDS mnaA NC_009699.1 178757 179914 D identified by match to protein family HMM PF02350; match to protein family HMM TIGR00236; UDP-N-acetylglucosamine 2-epimerase 178757..179914 Clostridium botulinum F str. Langeland 5404012 YP_001389512.1 CDS CLI_0204 NC_009699.1 180406 180774 D ATP synthase I 180406..180774 Clostridium botulinum F str. Langeland 5402534 YP_001389513.1 CDS atpB NC_009699.1 180789 181469 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 180789..181469 Clostridium botulinum F str. Langeland 5405013 YP_001389514.1 CDS atpE NC_009699.1 181509 181748 D produces ATP from ADP in the presence of a proton gradient across the membrane; subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 181509..181748 Clostridium botulinum F str. Langeland 5402441 YP_001389515.1 CDS atpF NC_009699.1 181824 182303 D produces ATP from ADP in the presence of a proton gradient across the membrane; subunit B is part of the membrane proton channel; F0F1 ATP synthase subunit B 181824..182303 Clostridium botulinum F str. Langeland 5402820 YP_001389516.1 CDS atpH NC_009699.1 182306 182845 D Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta 182306..182845 Clostridium botulinum F str. Langeland 5404642 YP_001389517.1 CDS atpA NC_009699.1 182856 184370 D produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 182856..184370 Clostridium botulinum F str. Langeland 5405060 YP_001389518.1 CDS atpG NC_009699.1 184392 185240 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 184392..185240 Clostridium botulinum F str. Langeland 5403482 YP_001389519.1 CDS atpD NC_009699.1 185254 186645 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 185254..186645 Clostridium botulinum F str. Langeland 5402605 YP_001389520.1 CDS atpC NC_009699.1 186670 187071 D produces ATP from ADP in the presence of a proton gradient across the membrane; the epsilon subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit epsilon 186670..187071 Clostridium botulinum F str. Langeland 5402683 YP_001389521.1 CDS CLI_0213 NC_009699.1 187265 187972 D hypothetical protein 187265..187972 Clostridium botulinum F str. Langeland 5402425 YP_001389522.1 CDS murA-1 NC_009699.1 187996 189252 D adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 187996..189252 Clostridium botulinum F str. Langeland 5403675 YP_001389523.1 CDS spoIID NC_009699.1 189524 190600 D identified by match to protein family HMM PF08486; match to protein family HMM TIGR02669; match to protein family HMM TIGR02870; stage II sporulation protein D 189524..190600 Clostridium botulinum F str. Langeland 5402840 YP_001389524.1 CDS CLI_0216 NC_009699.1 191187 191933 D identified by match to protein family HMM PF01551; peptidase 191187..191933 Clostridium botulinum F str. Langeland 5403885 YP_001389525.1 CDS spoIIID NC_009699.1 192041 192295 D identified by match to protein family HMM TIGR02844; stage III sporulation protein D 192041..192295 Clostridium botulinum F str. Langeland 5405166 YP_001389526.1 CDS CLI_0218 NC_009699.1 192395 193423 D identified by match to protein family HMM PF02491; match to protein family HMM PF06723; match to protein family HMM TIGR00904; rod shape-determining protein Mbl 192395..193423 Clostridium botulinum F str. Langeland 5405003 YP_001389527.1 CDS CLI_0219 NC_009699.1 193548 194072 R identified by match to protein family HMM PF06866; match to protein family HMM TIGR02841; hypothetical protein complement(193548..194072) Clostridium botulinum F str. Langeland 5404665 YP_001389528.1 CDS CLI_0220 NC_009699.1 194121 194843 R identified by match to protein family HMM PF01171; hypothetical protein complement(194121..194843) Clostridium botulinum F str. Langeland 5403186 YP_001389529.1 CDS CLI_0224 NC_009699.1 195077 195259 D identified by Glimmer3; hypothetical protein 195077..195259 Clostridium botulinum F str. Langeland 5401916 YP_001389530.1 CDS CLI_0230 NC_009699.1 195610 195744 D identified by Glimmer3; hypothetical protein 195610..195744 Clostridium botulinum F str. Langeland 5402381 YP_001389531.1 CDS metK NC_009699.1 195827 197002 D catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 195827..197002 Clostridium botulinum F str. Langeland 5403860 YP_001389532.1 CDS CLI_0232 NC_009699.1 197193 199427 D identified by match to protein family HMM TIGR01448; recombinase D 197193..199427 Clostridium botulinum F str. Langeland 5404330 YP_001389533.1 CDS CLI_0233 NC_009699.1 199453 200475 D hypothetical protein 199453..200475 Clostridium botulinum F str. Langeland 5404032 YP_001389534.1 CDS CLI_0234 NC_009699.1 200448 201125 D identified by match to protein family HMM PF00156; ComF-like protein 200448..201125 Clostridium botulinum F str. Langeland 5402845 YP_001389535.1 CDS yfiA NC_009699.1 201550 202077 D identified by match to protein family HMM PF02482; match to protein family HMM TIGR00741; ribosomal subunit interface protein 201550..202077 Clostridium botulinum F str. Langeland 5405540 YP_001389536.1 CDS secA NC_009699.1 202305 204812 D functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 202305..204812 Clostridium botulinum F str. Langeland 5404853 YP_001389537.1 CDS prfB NC_009699.1 205176 206153 D catalyzes the release of newly synthesized polypeptide chains at the stop codons UAA and UGA; peptide chain release factor 2 205176..206153 Clostridium botulinum F str. Langeland 5405310 YP_001389538.1 CDS CLI_0238 NC_009699.1 206409 207770 R identified by match to protein family HMM PF04389; peptidase family protein complement(206409..207770) Clostridium botulinum F str. Langeland 5402606 YP_001389539.1 CDS CLI_0239 NC_009699.1 207878 210034 D identified by match to protein family HMM PF00575; RNA-binding protein 207878..210034 Clostridium botulinum F str. Langeland 5403090 YP_001389540.1 CDS CLI_0240 NC_009699.1 210318 210911 D hypothetical protein 210318..210911 Clostridium botulinum F str. Langeland 5403988 YP_001389541.1 CDS CLI_0241 NC_009699.1 211322 212971 D hypothetical protein 211322..212971 Clostridium botulinum F str. Langeland 5405483 YP_001389542.1 CDS CLI_0242 NC_009699.1 212992 213252 D hypothetical protein 212992..213252 Clostridium botulinum F str. Langeland 5404814 YP_001389543.1 CDS CLI_0243 NC_009699.1 213266 213952 D identified by match to protein family HMM PF00149; Ser/Thr protein phosphatase family protein 213266..213952 Clostridium botulinum F str. Langeland 5401898 YP_001389544.1 CDS CLI_0244 NC_009699.1 214036 214317 D identified by match to protein family HMM PF01022; ArsR family transcriptional regulator 214036..214317 Clostridium botulinum F str. Langeland 5403349 YP_001389545.1 CDS CLI_0245 NC_009699.1 214357 216810 D identified by match to protein family HMM PF00070; match to protein family HMM PF00581; match to protein family HMM PF01206; match to protein family HMM PF02852; match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase family protein 214357..216810 Clostridium botulinum F str. Langeland 5405375 YP_001389546.1 CDS CLI_0246 NC_009699.1 216838 217692 R hypothetical protein complement(216838..217692) Clostridium botulinum F str. Langeland 5404239 YP_001389547.1 CDS CLI_0247 NC_009699.1 217849 218637 D identified by match to protein family HMM PF04607; RelA/SpoT domain-containing protein 217849..218637 Clostridium botulinum F str. Langeland 5402087 YP_001389548.1 CDS CLI_0248 NC_009699.1 218788 218901 D identified by Glimmer3; hypothetical protein 218788..218901 Clostridium botulinum F str. Langeland 5402938 YP_001389549.1 CDS leuS NC_009699.1 218941 221382 R leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase complement(218941..221382) Clostridium botulinum F str. Langeland 5403523 YP_001389550.1 CDS CLI_0250 NC_009699.1 221759 222163 R identified by match to protein family HMM PF00581; hypothetical protein complement(221759..222163) Clostridium botulinum F str. Langeland 5404958 YP_001389551.1 CDS CLI_0253 NC_009699.1 222477 223001 R hypothetical protein complement(222477..223001) Clostridium botulinum F str. Langeland 5403077 YP_001389552.1 CDS CLI_0254 NC_009699.1 223026 223625 R identified by match to protein family HMM PF00226; match to protein family HMM PF07719; DnaJ family molecular chaperone complement(223026..223625) Clostridium botulinum F str. Langeland 5405177 YP_001389553.1 CDS CLI_0255 NC_009699.1 223612 224487 R hypothetical protein complement(223612..224487) Clostridium botulinum F str. Langeland 5403827 YP_001389554.1 CDS CLI_0256 NC_009699.1 224491 225030 R identified by match to protein family HMM PF01928; adenylyl cyclase CyaB complement(224491..225030) Clostridium botulinum F str. Langeland 5402127 YP_001389555.1 CDS CLI_0257 NC_009699.1 225337 226374 D hypothetical protein 225337..226374 Clostridium botulinum F str. Langeland 5402492 YP_001389556.1 CDS fba NC_009699.1 226655 227581 R identified by match to protein family HMM PF01116; match to protein family HMM TIGR00167; match to protein family HMM TIGR01859; fructose-1,6-bisphosphate aldolase complement(226655..227581) Clostridium botulinum F str. Langeland 5402459 YP_001389557.1 CDS CLI_0259 NC_009699.1 227807 228091 R hypothetical protein complement(227807..228091) Clostridium botulinum F str. Langeland 5405431 YP_001389558.1 CDS CLI_0260 NC_009699.1 228208 228876 R identified by match to protein family HMM PF04239; hypothetical protein complement(228208..228876) Clostridium botulinum F str. Langeland 5405516 YP_001389559.1 CDS CLI_0261 NC_009699.1 229001 230659 D identified by match to protein family HMM PF00485; threonyl-tRNA synthetase/uridine kinase 229001..230659 Clostridium botulinum F str. Langeland 5403276 YP_001389560.1 CDS CLI_0262 NC_009699.1 230797 230928 D identified by Glimmer3; hypothetical protein 230797..230928 Clostridium botulinum F str. Langeland 5402752 YP_001389561.1 CDS pssA NC_009699.1 231029 231550 R identified by match to protein family HMM PF01066; match to protein family HMM TIGR00473; CDP-diacylglycerol--serine O-phosphatidyltransferase complement(231029..231550) Clostridium botulinum F str. Langeland 5405625 YP_001389562.1 CDS CLI_0264 NC_009699.1 231737 232153 D identified by match to protein family HMM PF00571; hypothetical protein 231737..232153 Clostridium botulinum F str. Langeland 5404982 YP_001389563.1 CDS CLI_0265 NC_009699.1 232259 233143 D similar to YegS from E. coli; lipid kinase 232259..233143 Clostridium botulinum F str. Langeland 5404211 YP_001389564.1 CDS CLI_0266 NC_009699.1 233217 233861 D hypothetical protein 233217..233861 Clostridium botulinum F str. Langeland 5405530 YP_001389565.1 CDS CLI_0267 NC_009699.1 234134 236071 R identified by match to protein family HMM PF04055; match to protein family HMM PF08497; hypothetical protein complement(234134..236071) Clostridium botulinum F str. Langeland 5402635 YP_001389566.1 CDS CLI_0268 NC_009699.1 236666 237931 D identified by match to protein family HMM PF00571; match to protein family HMM PF03448; match to protein family HMM PF05239; PRC-barrel domain/MgtE domain/CBS domain-containing protein 236666..237931 Clostridium botulinum F str. Langeland 5405075 YP_001389567.1 CDS sleB NC_009699.1 238156 238851 D identified by match to protein family HMM PF01471; match to protein family HMM PF07486; match to protein family HMM TIGR02869; spore-cortex-lytic enzyme 238156..238851 Clostridium botulinum F str. Langeland 5403264 YP_001389568.1 CDS cysK-1 NC_009699.1 239215 240129 D identified by match to protein family HMM PF00291; match to protein family HMM TIGR01136; match to protein family HMM TIGR01139; cysteine synthase A 239215..240129 Clostridium botulinum F str. Langeland 5404434 YP_001389569.1 CDS cysE NC_009699.1 240144 240740 D identified by match to protein family HMM PF00132; match to protein family HMM TIGR01172; serine O-acetyltransferase 240144..240740 Clostridium botulinum F str. Langeland 5404241 YP_001389570.1 CDS CLI_0272 NC_009699.1 240762 241727 D identified by match to protein family HMM PF08331; (Fe-S)-binding protein 240762..241727 Clostridium botulinum F str. Langeland 5404899 YP_001389571.1 CDS CLI_0273 NC_009699.1 241875 242576 D identified by match to protein family HMM PF01553; 1-acyl-sn-glycerol-3-phosphate acyltransferase 241875..242576 Clostridium botulinum F str. Langeland 5402810 YP_001389572.1 CDS nth NC_009699.1 242669 243310 D identified by match to protein family HMM PF00633; match to protein family HMM PF00730; match to protein family HMM TIGR01083; endonuclease III 242669..243310 Clostridium botulinum F str. Langeland 5403500 YP_001389573.1 CDS CLI_0275 NC_009699.1 243643 244815 D identified by match to protein family HMM PF00390; match to protein family HMM PF03949; malic enzyme 243643..244815 Clostridium botulinum F str. Langeland 5403284 YP_001389574.1 CDS CLI_0276 NC_009699.1 244842 246071 R identified by match to protein family HMM PF00994; match to protein family HMM PF02464; match to protein family HMM TIGR00177; match to protein family HMM TIGR00199; match to protein family HMM TIGR00200; competence damage-inducible protein A complement(244842..246071) Clostridium botulinum F str. Langeland 5403539 YP_001389575.1 CDS CLI_0277 NC_009699.1 246097 247080 R hypothetical protein complement(246097..247080) Clostridium botulinum F str. Langeland 5404804 YP_001389576.1 CDS CLI_0278 NC_009699.1 247190 248224 R identified by match to protein family HMM PF05343; glutamyl aminopeptidase family protein complement(247190..248224) Clostridium botulinum F str. Langeland 5402887 YP_001389577.1 CDS CLI_0279 NC_009699.1 248376 249512 D identified by match to protein family HMM PF04294; von Willebrand factor A 248376..249512 Clostridium botulinum F str. Langeland 5403750 YP_001389578.1 CDS CLI_0280 NC_009699.1 249716 251068 D identified by match to protein family HMM PF04294; match to protein family HMM PF07501; von Willebrand factor A 249716..251068 Clostridium botulinum F str. Langeland 5402967 YP_001389579.1 CDS splB NC_009699.1 251215 252222 D identified by match to protein family HMM PF04055; spore photoproduct lyase 251215..252222 Clostridium botulinum F str. Langeland 5404812 YP_001389580.1 CDS CLI_0282 NC_009699.1 252350 252817 D identified by match to protein family HMM PF00588; hypothetical protein 252350..252817 Clostridium botulinum F str. Langeland 5405079 YP_001389581.1 CDS CLI_0283 NC_009699.1 252830 253669 D identified by match to protein family HMM PF02645; match to protein family HMM TIGR00762; DegV family protein 252830..253669 Clostridium botulinum F str. Langeland 5402602 YP_001389582.1 CDS CLI_0284 NC_009699.1 253963 255066 D identified by match to protein family HMM PF02608; Bmp family lipoprotein 253963..255066 Clostridium botulinum F str. Langeland 5401969 YP_001389583.1 CDS CLI_0285 NC_009699.1 255249 256781 D identified by match to protein family HMM PF00005; sugar ABC transporter, ATP-binding protein 255249..256781 Clostridium botulinum F str. Langeland 5403746 YP_001389584.1 CDS CLI_0286 NC_009699.1 256783 257886 D identified by match to protein family HMM PF02653; sugar ABC transporter permease 256783..257886 Clostridium botulinum F str. Langeland 5405179 YP_001389585.1 CDS CLI_0287 NC_009699.1 257879 258805 D identified by match to protein family HMM PF02653; sugar ABC transporter permease 257879..258805 Clostridium botulinum F str. Langeland 5403972 YP_001389586.1 CDS CLI_0288 NC_009699.1 258917 259642 D identified by match to protein family HMM PF01522; polysaccharide deacetylase 258917..259642 Clostridium botulinum F str. Langeland 5403759 YP_001389587.1 CDS rpoN NC_009699.1 259980 261353 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 259980..261353 Clostridium botulinum F str. Langeland 5401905 YP_001389588.1 CDS cggR NC_009699.1 261641 262672 D identified by match to protein family HMM PF04198; central glycolytic genes regulator 261641..262672 Clostridium botulinum F str. Langeland 5402117 YP_001389589.1 CDS gap-1 NC_009699.1 262750 263757 D identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534; glyceraldehyde-3-phosphate dehydrogenase, type I 262750..263757 Clostridium botulinum F str. Langeland 5405041 YP_001389590.1 CDS pgk NC_009699.1 264054 265250 D Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 264054..265250 Clostridium botulinum F str. Langeland 5405290 YP_001389591.1 CDS tpiA NC_009699.1 265312 266058 D Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 265312..266058 Clostridium botulinum F str. Langeland 5402248 YP_001389592.1 CDS gpmI NC_009699.1 266150 267679 D catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 266150..267679 Clostridium botulinum F str. Langeland 5404338 YP_001389593.1 CDS eno NC_009699.1 267735 269030 D enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 267735..269030 Clostridium botulinum F str. Langeland 5403560 YP_001389594.1 CDS secG NC_009699.1 269254 269487 D identified by match to protein family HMM PF03840; match to protein family HMM TIGR00810; preprotein translocase subunit SecG 269254..269487 Clostridium botulinum F str. Langeland 5404637 YP_001389595.1 CDS rnr NC_009699.1 269697 271874 D identified by match to protein family HMM PF00575; match to protein family HMM PF00773; match to protein family HMM PF08206; match to protein family HMM TIGR00358; match to protein family HMM TIGR02063; ribonuclease R 269697..271874 Clostridium botulinum F str. Langeland 5404963 YP_001389596.1 CDS surE NC_009699.1 272283 273041 D catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 272283..273041 Clostridium botulinum F str. Langeland 5404780 YP_001389597.1 CDS smpB NC_009699.1 273298 273768 D binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 273298..273768 Clostridium botulinum F str. Langeland 5404425 YP_001389598.1 CDS CLI_0300 NC_009699.1 274232 275395 R identified by match to protein family HMM PF00375; sodium:dicarboxylate symporter family protein complement(274232..275395) Clostridium botulinum F str. Langeland 5403012 YP_001389599.1 CDS CLI_0301 NC_009699.1 276781 277284 D identified by match to protein family HMM PF08877; MepB family protein 276781..277284 Clostridium botulinum F str. Langeland 5405259 YP_001389600.1 CDS CLI_0302 NC_009699.1 277574 277984 R identified by Glimmer3; hypothetical protein complement(277574..277984) Clostridium botulinum F str. Langeland 5403709 YP_001389601.1 CDS CLI_0303 NC_009699.1 278333 279664 D identified by match to protein family HMM PF01565; match to protein family HMM PF08031; FAD-binding protein 278333..279664 Clostridium botulinum F str. Langeland 5402990 YP_001389602.1 CDS CLI_0304 NC_009699.1 280160 280936 D identified by match to protein family HMM PF08241; match to protein family HMM PF08242; methyltransferase 280160..280936 Clostridium botulinum F str. Langeland 5405283 YP_001389603.1 CDS CLI_0305 NC_009699.1 280973 281599 D identified by match to protein family HMM PF00027; cyclic nucleotide-binding protein 280973..281599 Clostridium botulinum F str. Langeland 5403695 YP_001389604.1 CDS CLI_0307 NC_009699.1 282570 283994 D identified by match to protein family HMM PF00282; amino acid decarboxylase 282570..283994 Clostridium botulinum F str. Langeland 5404020 YP_001389605.1 CDS CLI_0308 NC_009699.1 284232 285083 D identified by match to protein family HMM PF00669; match to protein family HMM PF00700; flagellin protein 284232..285083 Clostridium botulinum F str. Langeland 5404022 YP_001389606.1 CDS CLI_0309 NC_009699.1 285438 287054 D identified by match to protein family HMM PF01569; vanadium-dependent haloperoxidase 285438..287054 Clostridium botulinum F str. Langeland 5405226 YP_001389607.1 CDS CLI_0310 NC_009699.1 287553 288209 D identified by match to protein family HMM PF07883; hypothetical protein 287553..288209 Clostridium botulinum F str. Langeland 5402706 YP_001389608.1 CDS CLI_0311 NC_009699.1 288464 289147 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 288464..289147 Clostridium botulinum F str. Langeland 5402682 YP_001389609.1 CDS CLI_0312 NC_009699.1 289216 290223 D identified by match to protein family HMM PF02518; sensor histidine kinase 289216..290223 Clostridium botulinum F str. Langeland 5402122 YP_001389610.1 CDS CLI_0313 NC_009699.1 290298 291062 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 290298..291062 Clostridium botulinum F str. Langeland 5404213 YP_001389611.1 CDS CLI_0314 NC_009699.1 291049 292971 D identified by match to protein family HMM PF02687; efflux ABC transporter permease 291049..292971 Clostridium botulinum F str. Langeland 5403059 YP_001389612.1 CDS CLI_0315 NC_009699.1 292964 293935 D identified by similarity to GB:AAZ72381.1; hypothetical protein 292964..293935 Clostridium botulinum F str. Langeland 5403505 YP_001389613.1 CDS CLI_0316 NC_009699.1 294228 295694 D identified by match to protein family HMM PF07731; multicopper oxidase family protein 294228..295694 Clostridium botulinum F str. Langeland 5402181 YP_001389614.1 CDS CLI_0317 NC_009699.1 296056 297165 D hypothetical protein 296056..297165 Clostridium botulinum F str. Langeland 5404378 YP_001389615.1 CDS CLI_0318 NC_009699.1 297667 298839 D identified by match to protein family HMM PF00390; match to protein family HMM PF01262; match to protein family HMM PF03949; malic enzyme 297667..298839 Clostridium botulinum F str. Langeland 5402032 YP_001389616.1 CDS kdgT NC_009699.1 299051 300025 D transports degraded pectin products into the bacterial cell; 2-keto-3-deoxygluconate permease 299051..300025 Clostridium botulinum F str. Langeland 5403324 YP_001389617.1 CDS CLI_0320 NC_009699.1 300296 301918 D identified by match to protein family HMM PF02518; sensor histidine kinase 300296..301918 Clostridium botulinum F str. Langeland 5404605 YP_001389618.1 CDS CLI_0321 NC_009699.1 301896 302570 D identified by match to protein family HMM PF00072; response regulator 301896..302570 Clostridium botulinum F str. Langeland 5404082 YP_001389619.1 CDS lysP NC_009699.1 303128 304591 D identified by match to protein family HMM PF00324; lysine-specific permease 303128..304591 Clostridium botulinum F str. Langeland 5404755 YP_001389620.1 CDS CLI_0323 NC_009699.1 305135 305869 D identified by match to protein family HMM PF00753; metallo-beta-lactamase family protein 305135..305869 Clostridium botulinum F str. Langeland 5403200 YP_001389621.1 CDS CLI_0324 NC_009699.1 306010 306648 D identified by similarity to GB:AAF63432.1; match to protein family HMM PF00132; streptogramin A acetyltransferase 306010..306648 Clostridium botulinum F str. Langeland 5404946 YP_001389622.1 CDS CLI_0325 NC_009699.1 306687 307199 D identified by match to protein family HMM PF00583; acetyltransferase 306687..307199 Clostridium botulinum F str. Langeland 5405365 YP_001389623.1 CDS CLI_0326 NC_009699.1 307225 307602 D identified by match to protein family HMM PF00383; cytidine/deoxycytidylate deaminase family protein 307225..307602 Clostridium botulinum F str. Langeland 5402382 YP_001389624.1 CDS CLI_0327 NC_009699.1 307772 308674 D identified by match to protein family HMM PF00583; acetyltransferase 307772..308674 Clostridium botulinum F str. Langeland 5404161 YP_001389625.1 CDS CLI_0328 NC_009699.1 308700 309224 D identified by match to protein family HMM PF01872; riboflavin biosynthesis protein RibD domain-containing protein 308700..309224 Clostridium botulinum F str. Langeland 5404526 YP_001389626.1 CDS CLI_0329 NC_009699.1 309287 310216 D 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 309287..310216 Clostridium botulinum F str. Langeland 5404932 YP_001389627.1 CDS CLI_0330 NC_009699.1 310717 311391 R identified by match to protein family HMM PF00857; isochorismate family protein complement(310717..311391) Clostridium botulinum F str. Langeland 5404772 YP_001389628.1 CDS CLI_0331 NC_009699.1 311659 313989 D identified by match to protein family HMM PF01315; match to protein family HMM PF02738; xanthine dehydrogenase family protein, molybdopterin-binding subunit 311659..313989 Clostridium botulinum F str. Langeland 5404826 YP_001389629.1 CDS CLI_0332 NC_009699.1 313989 314828 D identified by match to protein family HMM PF00941; xanthine dehydrogenase family protein, FAD-binding subunit 313989..314828 Clostridium botulinum F str. Langeland 5404745 YP_001389630.1 CDS CLI_0333 NC_009699.1 314825 315298 D identified by match to protein family HMM PF00111; match to protein family HMM PF01799; xanthine dehydrogenase family protein, iron-sulfur-binding subunit 314825..315298 Clostridium botulinum F str. Langeland 5405349 YP_001389631.1 CDS CLI_0334 NC_009699.1 315655 316125 D identified by Glimmer3; hypothetical protein 315655..316125 Clostridium botulinum F str. Langeland 5402838 YP_001389632.1 CDS CLI_0335 NC_009699.1 316136 316819 D identified by match to protein family HMM PF02683; cytochrome c-type biogenesis protein CcdA 316136..316819 Clostridium botulinum F str. Langeland 5402485 YP_001389633.1 CDS CLI_0336 NC_009699.1 316841 317407 D identified by match to protein family HMM PF00085; match to protein family HMM PF00578; match to protein family HMM PF08534; thiol-disulfide oxidoreductase ResA 316841..317407 Clostridium botulinum F str. Langeland 5402603 YP_001389634.1 CDS CLI_0337 NC_009699.1 317432 318109 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 317432..318109 Clostridium botulinum F str. Langeland 5404834 YP_001389635.1 CDS CLI_0338 NC_009699.1 318081 319499 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 318081..319499 Clostridium botulinum F str. Langeland 5402473 YP_001389636.1 CDS CLI_0339 NC_009699.1 319710 321023 R identified by match to protein family HMM PF01565; match to protein family HMM PF08031; oxidoreductase, FAD-binding complement(319710..321023) Clostridium botulinum F str. Langeland 5401972 YP_001389637.1 CDS glvA-1 NC_009699.1 321344 322669 D identified by match to protein family HMM PF02056; maltose-6'-phosphate glucosidase 321344..322669 Clostridium botulinum F str. Langeland 5403619 YP_001389638.1 CDS CLI_0341 NC_009699.1 322837 324360 D identified by match to protein family HMM PF00367; match to protein family HMM PF02378; PTS system maltose/glucose-specfic transporter subunit IIBC 322837..324360 Clostridium botulinum F str. Langeland 5404726 YP_001389639.1 CDS CLI_0342 NC_009699.1 324411 325178 R identified by match to protein family HMM PF01380; match to protein family HMM PF01418; RpiR family transcriptional regulator complement(324411..325178) Clostridium botulinum F str. Langeland 5404800 YP_001389640.1 CDS CLI_0343 NC_009699.1 325194 325973 R identified by match to protein family HMM PF01380; match to protein family HMM PF01418; RpiR family transcriptional regulator complement(325194..325973) Clostridium botulinum F str. Langeland 5405197 YP_001389641.1 CDS CLI_0344 NC_009699.1 326247 326729 D identified by match to protein family HMM PF00358; match to protein family HMM TIGR00830; PTS system glucose family transporter subunit IIA 326247..326729 Clostridium botulinum F str. Langeland 5404566 YP_001389642.1 CDS CLI_0345 NC_009699.1 326737 327603 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 326737..327603 Clostridium botulinum F str. Langeland 5401871 YP_001389643.1 CDS CLI_0346 NC_009699.1 327613 328662 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase 327613..328662 Clostridium botulinum F str. Langeland 5403762 YP_001389644.1 CDS CLI_0347 NC_009699.1 328782 329552 D identified by match to protein family HMM PF00005; peptide ABC transporter ATP-binding protein 328782..329552 Clostridium botulinum F str. Langeland 5403535 YP_001389645.1 CDS CLI_0348 NC_009699.1 329566 331536 D identified by match to protein family HMM PF02687; peptide ABC transporter permease 329566..331536 Clostridium botulinum F str. Langeland 5402120 YP_001389646.1 CDS CLI_0350 NC_009699.1 333501 335072 D identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826; PTS system glucose/glucoside family transporter subunit IIBC 333501..335072 Clostridium botulinum F str. Langeland 5404494 YP_001389647.1 CDS glvA-2 NC_009699.1 335388 336713 D identified by match to protein family HMM PF02056; maltose-6'-phosphate glucosidase 335388..336713 Clostridium botulinum F str. Langeland 5401846 YP_001389648.1 CDS CLI_0352 NC_009699.1 336897 337406 D identified by match to protein family HMM PF00358; match to protein family HMM TIGR00830; PTS system glucose/glucoside family transporter subunit IIA 336897..337406 Clostridium botulinum F str. Langeland 5405035 YP_001389649.1 CDS CLI_0353 NC_009699.1 337711 338472 D identified by match to protein family HMM PF01380; match to protein family HMM PF01418; SIS domain-containing protein 337711..338472 Clostridium botulinum F str. Langeland 5402350 YP_001389650.1 CDS CLI_0354 NC_009699.1 338509 338691 R hypothetical protein complement(338509..338691) Clostridium botulinum F str. Langeland 5403662 YP_001389651.1 CDS CLI_0355 NC_009699.1 338960 339157 D identified by match to protein family HMM PF00313; cold shock protein 338960..339157 Clostridium botulinum F str. Langeland 5405312 YP_001389652.1 CDS CLI_0356 NC_009699.1 339500 340054 D identified by match to protein family HMM PF06210; hypothetical protein 339500..340054 Clostridium botulinum F str. Langeland 5403249 YP_001389653.1 CDS CLI_0357 NC_009699.1 340489 340920 D identified by match to protein family HMM PF02082; rrf2 family protein 340489..340920 Clostridium botulinum F str. Langeland 5405062 YP_001389654.1 CDS CLI_0358 NC_009699.1 341072 341677 D identified by match to protein family HMM PF01323; 2-hydroxychromene-2-carboxylate isomerase 341072..341677 Clostridium botulinum F str. Langeland 5405522 YP_001389655.1 CDS CLI_0359 NC_009699.1 341704 342342 D identified by match to protein family HMM PF01073; hypothetical protein 341704..342342 Clostridium botulinum F str. Langeland 5405176 YP_001389656.1 CDS CLI_0360 NC_009699.1 342780 343541 D identified by match to protein family HMM PF01380; match to protein family HMM PF01418; transcriptional regulator 342780..343541 Clostridium botulinum F str. Langeland 5404681 YP_001389657.1 CDS CLI_0361 NC_009699.1 343660 345243 D identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826; PTS system glucose/maltose-specfic transporter subunit IIBC 343660..345243 Clostridium botulinum F str. Langeland 5404623 YP_001389658.1 CDS glvA-3 NC_009699.1 345582 346916 D identified by match to protein family HMM PF02056; maltose-6'-phosphate glucosidase 345582..346916 Clostridium botulinum F str. Langeland 5404602 YP_001389659.1 CDS CLI_0363 NC_009699.1 346929 347402 D identified by match to protein family HMM PF00358; match to protein family HMM TIGR00830; PTS system glucose/maltose-specific transporter subunit IIA 346929..347402 Clostridium botulinum F str. Langeland 5404118 YP_001389660.1 CDS ilvD NC_009699.1 347540 349255 D identified by match to protein family HMM PF00920; dihydroxy-acid dehydratase 347540..349255 Clostridium botulinum F str. Langeland 5404589 YP_001389661.1 CDS eda NC_009699.1 349307 349954 D identified by match to protein family HMM PF01081; match to protein family HMM TIGR01182; 2-dehydro-3-deoxyphosphogluconate aldolase 349307..349954 Clostridium botulinum F str. Langeland 5404195 YP_001389662.1 CDS CLI_0366 NC_009699.1 349956 350960 D identified by match to protein family HMM PF00294; 2-dehydro-3-deoxygluconokinase 349956..350960 Clostridium botulinum F str. Langeland 5403334 YP_001389663.1 CDS ade NC_009699.1 351161 353014 D identified by match to protein family HMM PF01979; match to protein family HMM TIGR01178; adenine deaminase 351161..353014 Clostridium botulinum F str. Langeland 5401843 YP_001389664.1 CDS CLI_0368 NC_009699.1 353416 354090 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 353416..354090 Clostridium botulinum F str. Langeland 5403091 YP_001389665.1 CDS CLI_0369 NC_009699.1 354087 355475 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 354087..355475 Clostridium botulinum F str. Langeland 5404538 YP_001389666.1 CDS CLI_0370 NC_009699.1 355862 356830 D identified by match to protein family HMM PF00535; glycosyl transferase family protein 355862..356830 Clostridium botulinum F str. Langeland 5403493 YP_001389667.1 CDS CLI_0371 NC_009699.1 356814 357233 D identified by match to protein family HMM PF04138; cell wall teichoic acid glycosylation protein GtcA 356814..357233 Clostridium botulinum F str. Langeland 5403645 YP_001389668.1 CDS CLI_0372 NC_009699.1 357352 359643 D identified by match to protein family HMM PF02366; dolichyl-phosphate-mannose-protein mannosyltransferase family protein 357352..359643 Clostridium botulinum F str. Langeland 5404911 YP_001389669.1 CDS CLI_0373 NC_009699.1 359999 361036 D identified by match to protein family HMM PF00165; AraC family transcriptional regulator 359999..361036 Clostridium botulinum F str. Langeland 5401964 YP_001389670.1 CDS CLI_0374 NC_009699.1 361304 362332 D identified by match to protein family HMM PF01497; iron ABC transporter substrate-binding protein 361304..362332 Clostridium botulinum F str. Langeland 5402173 YP_001389671.1 CDS CLI_0375 NC_009699.1 362335 363453 D identified by match to protein family HMM PF01032; iron ABC transporter permease 362335..363453 Clostridium botulinum F str. Langeland 5402980 YP_001389672.1 CDS CLI_0376 NC_009699.1 363455 364225 D identified by match to protein family HMM PF00005; iron ABC transporter ATP-binding protein 363455..364225 Clostridium botulinum F str. Langeland 5402739 YP_001389673.1 CDS CLI_0377 NC_009699.1 364259 365587 D identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein 364259..365587 Clostridium botulinum F str. Langeland 5403556 YP_001389674.1 CDS CLI_0378 NC_009699.1 365732 366703 R identified by match to protein family HMM PF00165; AraC family transcriptional regulator complement(365732..366703) Clostridium botulinum F str. Langeland 5403220 YP_001389675.1 CDS CLI_0379 NC_009699.1 367107 368039 D identified by similarity to SP:P37580; match to protein family HMM PF01497; iron ABC transporter substrate-binding protein 367107..368039 Clostridium botulinum F str. Langeland 5405163 YP_001389676.1 CDS CLI_0380 NC_009699.1 368134 369063 D identified by match to protein family HMM PF01497; iron ABC transporter substrate-binding protein 368134..369063 Clostridium botulinum F str. Langeland 5404347 YP_001389677.1 CDS CLI_0381 NC_009699.1 369090 370118 D identified by match to protein family HMM PF01032; iron ABC transporter permease 369090..370118 Clostridium botulinum F str. Langeland 5404486 YP_001389678.1 CDS CLI_0382 NC_009699.1 370115 371128 D identified by match to protein family HMM PF01032; iron ABC transporter permease 370115..371128 Clostridium botulinum F str. Langeland 5403306 YP_001389679.1 CDS CLI_0383 NC_009699.1 371139 371969 D identified by match to protein family HMM PF00005; iron ABC transporter ATP-binding protein 371139..371969 Clostridium botulinum F str. Langeland 5404054 YP_001389680.1 CDS CLI_0384 NC_009699.1 371966 373690 D identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease 371966..373690 Clostridium botulinum F str. Langeland 5402407 YP_001389681.1 CDS CLI_0385 NC_009699.1 373745 373858 R iron-dependent transcription repressor complement(373745..373858) Clostridium botulinum F str. Langeland 5403129 YP_001389682.1 CDS CLI_0386 NC_009699.1 374375 375676 D identified by match to protein family HMM PF00860; match to protein family HMM TIGR00801; match to protein family HMM TIGR03173; xanthine/uracil permease family protein 374375..375676 Clostridium botulinum F str. Langeland 5404586 YP_001389683.1 CDS xpt-1 NC_009699.1 375699 376271 D Catalyzes the transfer of the phosphoribosyl moiety from 5-phospho--D-ribosyl-1-pyrophosphate (PRib-PP) to the 6-oxo-guanine and -xanthine; xanthine phosphoribosyltransferase 375699..376271 Clostridium botulinum F str. Langeland 5404100 YP_001389684.1 CDS CLI_0388 NC_009699.1 376723 377415 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 376723..377415 Clostridium botulinum F str. Langeland 5403543 YP_001389685.1 CDS CLI_0389 NC_009699.1 377428 378408 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase 377428..378408 Clostridium botulinum F str. Langeland 5405021 YP_001389686.1 CDS CLI_0390 NC_009699.1 378584 379441 D BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters UDP disphosphate which reduces the pool of lipid carrier available to the cell; UDP pyrophosphate phosphatase 378584..379441 Clostridium botulinum F str. Langeland 5404019 YP_001389687.1 CDS CLI_0391 NC_009699.1 379456 380202 D identified by match to protein family HMM PF00005; peptide ABC transporter ATP-binding protein 379456..380202 Clostridium botulinum F str. Langeland 5402997 YP_001389688.1 CDS CLI_0392 NC_009699.1 380202 382064 D identified by match to protein family HMM PF02687; peptide ABC transporter permease 380202..382064 Clostridium botulinum F str. Langeland 5402946 YP_001389689.1 CDS CLI_0393 NC_009699.1 382189 382596 D identified by Glimmer3; hypothetical protein 382189..382596 Clostridium botulinum F str. Langeland 5403456 YP_001389690.1 CDS CLI_0394 NC_009699.1 382589 382996 D identified by similarity to GB:AAY60422.1; match to protein family HMM PF01934; hypothetical protein 382589..382996 Clostridium botulinum F str. Langeland 5402320 YP_001389691.1 CDS CLI_0395 NC_009699.1 383312 383668 D identified by match to protein family HMM PF03788; LrgA family protein 383312..383668 Clostridium botulinum F str. Langeland 5404528 YP_001389692.1 CDS CLI_0396 NC_009699.1 383671 384366 D identified by match to protein family HMM PF04172; lrgB-like family protein 383671..384366 Clostridium botulinum F str. Langeland 5403338 YP_001389693.1 CDS CLI_0397 NC_009699.1 384662 385312 D lipoprotein 384662..385312 Clostridium botulinum F str. Langeland 5403189 YP_001389694.1 CDS CLI_0398 NC_009699.1 385681 386580 D identified by match to protein family HMM PF04055; radical SAM domain-containing protein 385681..386580 Clostridium botulinum F str. Langeland 5403366 YP_001389695.1 CDS CLI_0399 NC_009699.1 386715 388223 D identified by match to protein family HMM PF08903; hypothetical protein 386715..388223 Clostridium botulinum F str. Langeland 5404402 YP_001389696.1 CDS CLI_0400 NC_009699.1 388533 389084 D hypothetical protein 388533..389084 Clostridium botulinum F str. Langeland 5405588 YP_001389697.1 CDS CLI_0401 NC_009699.1 389263 389730 D hypothetical protein 389263..389730 Clostridium botulinum F str. Langeland 5403975 YP_001389698.1 CDS CLI_0402 NC_009699.1 389723 390412 D identified by match to protein family HMM PF04647; accessory gene regulator protein B 389723..390412 Clostridium botulinum F str. Langeland 5404865 YP_001389699.1 CDS CLI_0403 NC_009699.1 390396 390530 D lipoprotein 390396..390530 Clostridium botulinum F str. Langeland 5402502 YP_001389700.1 CDS CLI_0404 NC_009699.1 390602 392305 D identified by match to protein family HMM PF00990; match to protein family HMM PF01966; match to protein family HMM TIGR00254; diguanylate cyclase 390602..392305 Clostridium botulinum F str. Langeland 5405253 YP_001389701.1 CDS CLI_0405 NC_009699.1 392530 393045 D identified by match to protein family HMM PF00583; acetyltransferase 392530..393045 Clostridium botulinum F str. Langeland 5402954 YP_001389702.1 CDS CLI_0406 NC_009699.1 393442 393894 D hypothetical protein 393442..393894 Clostridium botulinum F str. Langeland 5402413 YP_001389703.1 CDS CLI_0407 NC_009699.1 393921 395768 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM TIGR00229; sensory box histidine kinase 393921..395768 Clostridium botulinum F str. Langeland 5404186 YP_001389704.1 CDS CLI_0408 NC_009699.1 395997 396464 D hypothetical protein 395997..396464 Clostridium botulinum F str. Langeland 5403016 YP_001389705.1 CDS CLI_0409 NC_009699.1 396451 397080 D identified by match to protein family HMM PF04647; accessory gene regulator B 396451..397080 Clostridium botulinum F str. Langeland 5402854 YP_001389706.1 CDS CLI_0410 NC_009699.1 397115 397249 D identified by Glimmer3; hypothetical protein 397115..397249 Clostridium botulinum F str. Langeland 5403377 YP_001389707.1 CDS CLI_0411 NC_009699.1 397331 399184 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM TIGR00229; sensory box histidine kinase 397331..399184 Clostridium botulinum F str. Langeland 5404296 YP_001389708.1 CDS CLI_0412 NC_009699.1 399417 400283 D identified by match to protein family HMM PF01171; PP-loop family protein 399417..400283 Clostridium botulinum F str. Langeland 5405652 YP_001389709.1 CDS CLI_0413 NC_009699.1 400409 400954 R identified by match to protein family HMM PF01381; match to protein family HMM PF07883; DNA-binding protein complement(400409..400954) Clostridium botulinum F str. Langeland 5405236 YP_001389710.1 CDS CLI_0414 NC_009699.1 401308 402714 D identified by match to protein family HMM PF00324; amino acid permease 401308..402714 Clostridium botulinum F str. Langeland 5401928 YP_001389711.1 CDS CLI_0415 NC_009699.1 402830 403912 D identified by match to protein family HMM PF00557; match to protein family HMM PF01321; M24 family metallopeptidase 402830..403912 Clostridium botulinum F str. Langeland 5403800 YP_001389712.1 CDS adhE NC_009699.1 404450 407038 D identified by match to protein family HMM PF00171; match to protein family HMM PF00465; bifunctional acetaldehyde-CoA/alcohol dehydrogenase 404450..407038 Clostridium botulinum F str. Langeland 5402265 YP_001389713.1 CDS CLI_0417 NC_009699.1 407357 407644 D hypothetical protein 407357..407644 Clostridium botulinum F str. Langeland 5403224 YP_001389714.1 CDS CLI_0418 NC_009699.1 407707 408297 D hypothetical protein 407707..408297 Clostridium botulinum F str. Langeland 5404936 YP_001389715.1 CDS CLI_0419 NC_009699.1 408334 408504 D identified by Glimmer3; hypothetical protein 408334..408504 Clostridium botulinum F str. Langeland 5403300 YP_001389716.1 CDS CLI_0420 NC_009699.1 408583 409062 R hypothetical protein complement(408583..409062) Clostridium botulinum F str. Langeland 5404748 YP_001389717.1 CDS CLI_0421 NC_009699.1 409405 410415 R hypothetical protein complement(409405..410415) Clostridium botulinum F str. Langeland 5403626 YP_001389718.1 CDS CLI_0422 NC_009699.1 410519 411046 D identified by match to protein family HMM PF01569; PAP2 family protein 410519..411046 Clostridium botulinum F str. Langeland 5403339 YP_001389719.1 CDS CLI_0423 NC_009699.1 411457 412269 D identified by match to protein family HMM PF01522; polysaccharide deacetylase 411457..412269 Clostridium botulinum F str. Langeland 5402417 YP_001389720.1 CDS CLI_0424 NC_009699.1 412377 413063 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 412377..413063 Clostridium botulinum F str. Langeland 5405517 YP_001389721.1 CDS CLI_0425 NC_009699.1 413073 414467 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 413073..414467 Clostridium botulinum F str. Langeland 5404234 YP_001389722.1 CDS CLI_0426 NC_009699.1 414530 416020 D lipoprotein 414530..416020 Clostridium botulinum F str. Langeland 5404630 YP_001389723.1 CDS CLI_0427 NC_009699.1 416064 416630 D identified by match to protein family HMM PF06962; hypothetical protein 416064..416630 Clostridium botulinum F str. Langeland 5404051 YP_001389724.1 CDS CLI_0428 NC_009699.1 416656 417330 D identified by match to protein family HMM PF09335; DedA family protein 416656..417330 Clostridium botulinum F str. Langeland 5404256 YP_001389725.1 CDS CLI_0429 NC_009699.1 417755 420433 R identified by match to protein family HMM PF00563; match to protein family HMM PF00672; match to protein family HMM PF00990; match to protein family HMM PF05228; match to protein family HMM TIGR00254; multisensor diguanylate cyclase/phophodiesterase complement(417755..420433) Clostridium botulinum F str. Langeland 5405661 YP_001389726.1 CDS CLI_0430 NC_009699.1 420633 421820 R hypothetical protein complement(420633..421820) Clostridium botulinum F str. Langeland 5403781 YP_001389727.1 CDS CLI_0431 NC_009699.1 422073 423413 D identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein 422073..423413 Clostridium botulinum F str. Langeland 5405150 YP_001389728.1 CDS CLI_0432 NC_009699.1 423605 424171 D identified by match to protein family HMM PF01966; match to protein family HMM TIGR00277; HD domain-containing protein 423605..424171 Clostridium botulinum F str. Langeland 5404657 YP_001389729.1 CDS CLI_0433 NC_009699.1 424483 425751 D identified by match to protein family HMM PF00999; monovalent cation:proton antiporter-2 (CPA2) family protein 424483..425751 Clostridium botulinum F str. Langeland 5403987 YP_001389730.1 CDS CLI_0434 NC_009699.1 425886 427208 R identified by match to protein family HMM PF00266; class V aminotransferase complement(425886..427208) Clostridium botulinum F str. Langeland 5402465 YP_001389731.1 CDS CLI_0435 NC_009699.1 427671 428681 D identified by match to protein family HMM PF03601; hypothetical protein 427671..428681 Clostridium botulinum F str. Langeland 5402771 YP_001389732.1 CDS CLI_0436 NC_009699.1 428813 429487 D hypothetical protein 428813..429487 Clostridium botulinum F str. Langeland 5403140 YP_001389733.1 CDS CLI_0437 NC_009699.1 429433 430131 D identified by match to protein family HMM PF00486; DNA-binding response regulator 429433..430131 Clostridium botulinum F str. Langeland 5405610 YP_001389734.1 CDS CLI_0438 NC_009699.1 430121 431635 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 430121..431635 Clostridium botulinum F str. Langeland 5404614 YP_001389735.1 CDS CLI_0439 NC_009699.1 431743 433158 D identified by match to protein family HMM PF00474; sodium:solute symporter family protein 431743..433158 Clostridium botulinum F str. Langeland 5401991 YP_001389736.1 CDS CLI_0440 NC_009699.1 434388 435707 D identified by match to protein family HMM PF00037; match to protein family HMM PF01512; match to protein family HMM TIGR01945; RnfABCDGE type electron transport complex subunit C 434388..435707 Clostridium botulinum F str. Langeland 5404104 YP_001389737.1 CDS CLI_0441 NC_009699.1 435730 436662 D identified by match to protein family HMM PF03116; match to protein family HMM TIGR01946; RnfABCDGE type electron transport complex subunit D 435730..436662 Clostridium botulinum F str. Langeland 5401899 YP_001389738.1 CDS CLI_0442 NC_009699.1 436662 437333 D identified by match to protein family HMM PF04205; match to protein family HMM TIGR01947; RnfABCDGE type electron transport complex subunit G 436662..437333 Clostridium botulinum F str. Langeland 5401908 YP_001389739.1 CDS CLI_0443 NC_009699.1 437344 437946 D in Excherichia coli RsxABCDEG reduces SoxR which turns off induction of SoxS transcription factor in the absence of oxidizing agents; similar to the rnfABCDGE operon in Rhodobacter capsulatus involved in transferring electrons to nitrogenase; electron transport complex protein RsxE 437344..437946 Clostridium botulinum F str. Langeland 5404859 YP_001389740.1 CDS CLI_0444 NC_009699.1 438000 438578 D identified by match to protein family HMM PF02508; match to protein family HMM TIGR01943; RnfABCDGE type electron transport complex subunit A 438000..438578 Clostridium botulinum F str. Langeland 5404179 YP_001389741.1 CDS CLI_0445 NC_009699.1 438592 439425 D involved in the electron transport chain; in Methanosarcina acetivorans this protein is part of a cluster involved in electron transfer during growth on acetate; ferredoxin 438592..439425 Clostridium botulinum F str. Langeland 5405357 YP_001389742.1 CDS CLI_0446 NC_009699.1 439818 440906 D identified by match to protein family HMM PF04122; amidase 439818..440906 Clostridium botulinum F str. Langeland 5404872 YP_001389743.1 CDS CLI_0447 NC_009699.1 441009 441545 R identified by match to protein family HMM PF07456; hypothetical protein complement(441009..441545) Clostridium botulinum F str. Langeland 5403214 YP_001389744.1 CDS CLI_0448 NC_009699.1 441563 441955 R identified by match to protein family HMM PF07009; hypothetical protein complement(441563..441955) Clostridium botulinum F str. Langeland 5402914 YP_001389745.1 CDS CLI_0449 NC_009699.1 442069 443103 R identified by match to protein family HMM PF02424; apbE family protein complement(442069..443103) Clostridium botulinum F str. Langeland 5405515 YP_001389746.1 CDS CLI_0450 NC_009699.1 443713 447903 D identified by match to protein family HMM PF04122; S-layer protein 443713..447903 Clostridium botulinum F str. Langeland 5402168 YP_001389747.1 CDS CLI_0451 NC_009699.1 448382 450403 D identified by match to protein family HMM PF04122; match to protein family HMM PF04151; N-acetylmuramoyl-L-alanine amidase 448382..450403 Clostridium botulinum F str. Langeland 5402815 YP_001389748.1 CDS CLI_0452 NC_009699.1 450516 450884 D lipoprotein 450516..450884 Clostridium botulinum F str. Langeland 5405087 YP_001389749.1 CDS CLI_0453 NC_009699.1 450973 451239 D identified by Glimmer3; hypothetical protein 450973..451239 Clostridium botulinum F str. Langeland 5404071 YP_001389750.1 CDS CLI_0454 NC_009699.1 451515 457352 D identified by match to protein family HMM PF04122; cell surface protein 451515..457352 Clostridium botulinum F str. Langeland 5403711 YP_001389751.1 CDS CLI_0455 NC_009699.1 457412 457591 R identified by Glimmer3; hypothetical protein complement(457412..457591) Clostridium botulinum F str. Langeland 5404891 YP_001389752.1 CDS CLI_0456 NC_009699.1 458110 461496 D identified by match to protein family HMM PF04122; cell wall-binding protease 458110..461496 Clostridium botulinum F str. Langeland 5402337 YP_001389753.1 CDS CLI_0457 NC_009699.1 461582 462571 R acyltransferase complement(461582..462571) Clostridium botulinum F str. Langeland 5404431 YP_001389754.1 CDS CLI_0458 NC_009699.1 463174 464685 D hypothetical protein 463174..464685 Clostridium botulinum F str. Langeland 5403962 YP_001389755.1 CDS CLI_0459 NC_009699.1 465082 465993 D phosphate ABC transporter substrate-binding protein 465082..465993 Clostridium botulinum F str. Langeland 5404187 YP_001389756.1 CDS CLI_0460 NC_009699.1 466188 467060 D identified by match to protein family HMM PF00528; phosphate ABC transporter permease 466188..467060 Clostridium botulinum F str. Langeland 5403410 YP_001389757.1 CDS CLI_0461 NC_009699.1 467096 467926 D identified by match to protein family HMM PF00528; match to protein family HMM TIGR00974; phosphate ABC transporter permease 467096..467926 Clostridium botulinum F str. Langeland 5402715 YP_001389758.1 CDS CLI_0462 NC_009699.1 467928 468674 D identified by match to protein family HMM PF00005; phosphate ABC transporter ATP-binding protein 467928..468674 Clostridium botulinum F str. Langeland 5401955 YP_001389759.1 CDS CLI_0463 NC_009699.1 468800 469270 D hypothetical protein 468800..469270 Clostridium botulinum F str. Langeland 5402082 YP_001389760.1 CDS CLI_0464 NC_009699.1 469877 471328 D identified by match to protein family HMM PF00324; amino acid permease 469877..471328 Clostridium botulinum F str. Langeland 5404014 YP_001389761.1 CDS CLI_0465 NC_009699.1 471394 471948 R identified by match to protein family HMM TIGR02898; lipoprotein complement(471394..471948) Clostridium botulinum F str. Langeland 5405111 YP_001389762.1 CDS CLI_0466 NC_009699.1 472137 472967 D hypothetical protein 472137..472967 Clostridium botulinum F str. Langeland 5404418 YP_001389763.1 CDS CLI_0467 NC_009699.1 473045 473740 D identified by match to protein family HMM PF01863; hypothetical protein 473045..473740 Clostridium botulinum F str. Langeland 5401885 YP_001389764.1 CDS CLI_0468 NC_009699.1 473827 474165 D identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621; ssDNA-binding protein 473827..474165 Clostridium botulinum F str. Langeland 5404813 YP_001389765.1 CDS CLI_0469 NC_009699.1 474419 474970 D hypothetical protein 474419..474970 Clostridium botulinum F str. Langeland 5403578 YP_001389766.1 CDS CLI_0471 NC_009699.1 475034 475468 D identified by match to protein family HMM PF01475; FUR family transcriptional regulator 475034..475468 Clostridium botulinum F str. Langeland 5402312 YP_001389767.1 CDS CLI_0470 NC_009699.1 475465 475812 R identified by similarity to GB:AAK78928.1; hypothetical protein complement(475465..475812) Clostridium botulinum F str. Langeland 5404633 YP_001389768.1 CDS CLI_0472 NC_009699.1 476083 477141 D identified by match to protein family HMM PF01966; HD domain-containing protein 476083..477141 Clostridium botulinum F str. Langeland 5403209 YP_001389769.1 CDS CLI_0473 NC_009699.1 477278 478300 D identified by match to protein family HMM PF01694; S54 family peptidase 477278..478300 Clostridium botulinum F str. Langeland 5404501 YP_001389770.1 CDS CLI_0474 NC_009699.1 478471 480525 R identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF02743; methyl-accepting chemotaxis protein complement(478471..480525) Clostridium botulinum F str. Langeland 5405555 YP_001389771.1 CDS CLI_0475 NC_009699.1 481428 483164 R identified by match to protein family HMM PF00004; match to protein family HMM PF01434; match to protein family HMM PF06480; match to protein family HMM PF07728; match to protein family HMM TIGR01241; cell division protease FtsH-like protein complement(481428..483164) Clostridium botulinum F str. Langeland 5402983 YP_001389772.1 CDS CLI_0476 NC_009699.1 483384 484439 D identified by match to protein family HMM PF06803; hypothetical protein 483384..484439 Clostridium botulinum F str. Langeland 5404510 YP_001389773.1 CDS rnhA NC_009699.1 484414 484863 D An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H 484414..484863 Clostridium botulinum F str. Langeland 5402139 YP_001389774.1 CDS CLI_0478 NC_009699.1 484926 485102 D identified by Glimmer3; hypothetical protein 484926..485102 Clostridium botulinum F str. Langeland 5405648 YP_001389775.1 CDS CLI_0479 NC_009699.1 485283 486587 D identified by match to protein family HMM PF00515; match to protein family HMM PF01381; TPR repeat-containing DNA binding protein 485283..486587 Clostridium botulinum F str. Langeland 5402113 YP_001389776.1 CDS CLI_0480 NC_009699.1 486619 487872 D identified by match to protein family HMM PF00515; match to protein family HMM PF07719; hypothetical protein 486619..487872 Clostridium botulinum F str. Langeland 5404969 YP_001389777.1 CDS CLI_0481 NC_009699.1 488186 488323 D identified by Glimmer3; hypothetical protein 488186..488323 Clostridium botulinum F str. Langeland 5403938 YP_001389778.1 CDS CLI_0482 NC_009699.1 488474 489079 D identified by match to protein family HMM PF01965; DJ-1/PfpI family protein 488474..489079 Clostridium botulinum F str. Langeland 5405168 YP_001389779.1 CDS CLI_0483 NC_009699.1 489337 490200 D hypothetical protein 489337..490200 Clostridium botulinum F str. Langeland 5402205 YP_001389780.1 CDS clpB NC_009699.1 490652 493252 D identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; match to protein family HMM TIGR03346; clpB protein 490652..493252 Clostridium botulinum F str. Langeland 5403113 YP_001389781.1 CDS CLI_0485 NC_009699.1 493915 494643 R identified by match to protein family HMM PF07685; CobB/CobQ family glutamine amidotransferase complement(493915..494643) Clostridium botulinum F str. Langeland 5405496 YP_001389782.1 CDS CLI_0486 NC_009699.1 494701 496062 R identified by match to protein family HMM PF08245; match to protein family HMM PF08353; UDP-N-acetylmuramyl tripeptide synthetase-like protein complement(494701..496062) Clostridium botulinum F str. Langeland 5402692 YP_001389783.1 CDS manA NC_009699.1 496327 497307 D identified by match to protein family HMM PF01238; match to protein family HMM TIGR00218; mannose-6-phosphate isomerase 496327..497307 Clostridium botulinum F str. Langeland 5402844 YP_001389784.1 CDS CLI_0488 NC_009699.1 497657 498772 D lipoprotein 497657..498772 Clostridium botulinum F str. Langeland 5402964 YP_001389785.1 CDS CLI_0489 NC_009699.1 498880 499734 D phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters UDP disphosphate which reduces the pool of lipid carrier available to the cell; UDP pyrophosphate phosphatase 498880..499734 Clostridium botulinum F str. Langeland 5403669 YP_001389786.1 CDS CLI_0500 NC_009699.1 505688 506551 R identified by match to protein family HMM PF00753; metallo-beta-lactamase family protein complement(505688..506551) Clostridium botulinum F str. Langeland 5405135 YP_001389787.1 CDS CLI_0501 NC_009699.1 506688 507410 D identified by match to protein family HMM PF01553; match to protein family HMM TIGR00530; 1-acyl-sn-glycerol-3-phosphate acyltransferase 506688..507410 Clostridium botulinum F str. Langeland 5402558 YP_001389788.1 CDS CLI_0502 NC_009699.1 508142 509503 D identified by match to protein family HMM PF00682; HMGL-related enzyme 508142..509503 Clostridium botulinum F str. Langeland 5404138 YP_001389789.1 CDS CLI_0503 NC_009699.1 509647 511572 D Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 509647..511572 Clostridium botulinum F str. Langeland 5404220 YP_001389790.1 CDS CLI_0504 NC_009699.1 511608 512606 D identified by match to protein family HMM PF00180; isocitrate/isopropylmalate family dehydrogenase 511608..512606 Clostridium botulinum F str. Langeland 5405165 YP_001389791.1 CDS CLI_0505 NC_009699.1 512854 513639 D identified by match to protein family HMM PF00005; polar amino acid ABC transporter ATP-binding protein 512854..513639 Clostridium botulinum F str. Langeland 5405251 YP_001389792.1 CDS CLI_0506 NC_009699.1 514158 515924 D identified by match to protein family HMM PF03553; match to protein family HMM PF03606; Na+/H+ antiporter family protein 514158..515924 Clostridium botulinum F str. Langeland 5405125 YP_001389793.1 CDS CLI_0507 NC_009699.1 515951 516166 R identified by match to protein family HMM PF04070; hypothetical protein complement(515951..516166) Clostridium botulinum F str. Langeland 5404942 YP_001389794.1 CDS panD NC_009699.1 516254 516637 R Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase complement(516254..516637) Clostridium botulinum F str. Langeland 5403350 YP_001389795.1 CDS panC NC_009699.1 516947 517792 R catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase complement(516947..517792) Clostridium botulinum F str. Langeland 5402675 YP_001389796.1 CDS panB NC_009699.1 517847 518674 R catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase complement(517847..518674) Clostridium botulinum F str. Langeland 5401996 YP_001389797.1 CDS addB NC_009699.1 519450 522902 D identified by match to protein family HMM TIGR02773; ATP-dependent nuclease subunit B 519450..522902 Clostridium botulinum F str. Langeland 5402332 YP_001389798.1 CDS CLI_0512 NC_009699.1 523116 523502 R identified by Glimmer3; hypothetical protein complement(523116..523502) Clostridium botulinum F str. Langeland 5403537 YP_001389799.1 CDS CLI_0513 NC_009699.1 523809 524459 D identified by match to protein family HMM PF00515; match to protein family HMM PF07719; hypothetical protein 523809..524459 Clostridium botulinum F str. Langeland 5401944 YP_001389800.1 CDS CLI_0514 NC_009699.1 524462 525148 D hypothetical protein 524462..525148 Clostridium botulinum F str. Langeland 5404823 YP_001389801.1 CDS CLI_0515 NC_009699.1 525397 526005 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(525397..526005) Clostridium botulinum F str. Langeland 5404199 YP_001389802.1 CDS hypB-1 NC_009699.1 526252 526923 D identified by match to protein family HMM PF02492; match to protein family HMM TIGR00073; hydrogenase nickel incorporation protein HypB 526252..526923 Clostridium botulinum F str. Langeland 5401900 YP_001389803.1 CDS CLI_0517 NC_009699.1 527159 529837 D identified by match to protein family HMM PF00037; match to protein family HMM PF00070; match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase family protein 527159..529837 Clostridium botulinum F str. Langeland 5404727 YP_001389804.1 CDS hypA-1 NC_009699.1 529893 530234 D identified by match to protein family HMM PF01155; hydrogenase nickel incorporation protein HypA 529893..530234 Clostridium botulinum F str. Langeland 5405048 YP_001389805.1 CDS CLI_0519 NC_009699.1 530274 531260 D hypothetical protein 530274..531260 Clostridium botulinum F str. Langeland 5402252 YP_001389806.1 CDS CLI_0520 NC_009699.1 531434 531922 R identified by Glimmer3; hypothetical protein complement(531434..531922) Clostridium botulinum F str. Langeland 5402438 YP_001389807.1 CDS CLI_0521 NC_009699.1 532339 533130 D identified by similarity to GB:AAK78733.1; hypothetical protein 532339..533130 Clostridium botulinum F str. Langeland 5402097 YP_001389808.1 CDS addA NC_009699.1 533288 537127 D identified by match to protein family HMM PF00580; match to protein family HMM TIGR02785; recombination helicase AddA 533288..537127 Clostridium botulinum F str. Langeland 5401901 YP_001389809.1 CDS CLI_0523 NC_009699.1 537276 538958 D identified by match to protein family HMM PF00015; methyl-accepting chemotaxis protein 537276..538958 Clostridium botulinum F str. Langeland 5403956 YP_001389810.1 CDS pepT NC_009699.1 539035 540261 D catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 539035..540261 Clostridium botulinum F str. Langeland 5402753 YP_001389811.1 CDS CLI_0525 NC_009699.1 540536 541468 R identified by match to protein family HMM PF01734; phospholipase family protein complement(540536..541468) Clostridium botulinum F str. Langeland 5402047 YP_001389812.1 CDS CLI_0526 NC_009699.1 542266 542982 D identified by match to protein family HMM PF00753; metallo-beta-lactamase family protein 542266..542982 Clostridium botulinum F str. Langeland 5402586 YP_001389813.1 CDS CLI_0527 NC_009699.1 543188 543646 D identified by match to protein family HMM PF00903; glyoxalase 543188..543646 Clostridium botulinum F str. Langeland 5404987 YP_001389814.1 CDS CLI_0528 NC_009699.1 543786 544001 D identified by Glimmer3; hypothetical protein 543786..544001 Clostridium botulinum F str. Langeland 5401906 YP_001389815.1 CDS CLI_0529 NC_009699.1 544213 545628 D identified by match to protein family HMM PF04122; N-acetylmuramoyl-L-alanine amidase-like protein 544213..545628 Clostridium botulinum F str. Langeland 5402335 YP_001389816.1 CDS CLI_0530 NC_009699.1 545937 546572 R identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; His/Glu/Gln/Arg/opine ABC transporter permease complement(545937..546572) Clostridium botulinum F str. Langeland 5402244 YP_001389817.1 CDS CLI_0531 NC_009699.1 546585 547388 R identified by match to protein family HMM PF00497; polar amino acid ABC transporter amino acid-binding protein complement(546585..547388) Clostridium botulinum F str. Langeland 5402637 YP_001389818.1 CDS CLI_0532 NC_009699.1 547610 548338 D identified by match to protein family HMM PF08241; match to protein family HMM PF08242; hypothetical protein 547610..548338 Clostridium botulinum F str. Langeland 5403031 YP_001389819.1 CDS CLI_0533 NC_009699.1 548675 549886 R identified by match to protein family HMM PF00563; match to protein family HMM PF08668; EAL domain-containing protein complement(548675..549886) Clostridium botulinum F str. Langeland 5404028 YP_001389820.1 CDS thiE NC_009699.1 550151 550768 R Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate; thiamine-phosphate pyrophosphorylase complement(550151..550768) Clostridium botulinum F str. Langeland 5402412 YP_001389821.1 CDS thiM-1 NC_009699.1 550759 551550 R identified by match to protein family HMM PF02110; match to protein family HMM TIGR00694; hydroxyethylthiazole kinase complement(550759..551550) Clostridium botulinum F str. Langeland 5405245 YP_001389822.1 CDS thiD-1 NC_009699.1 551778 552578 R identified by match to protein family HMM PF08543; match to protein family HMM TIGR00097; phosphomethylpyrimidine kinase complement(551778..552578) Clostridium botulinum F str. Langeland 5405333 YP_001389823.1 CDS CLI_0537 NC_009699.1 553156 553707 D identified by Glimmer3; hypothetical protein 553156..553707 Clostridium botulinum F str. Langeland 5405006 YP_001389824.1 CDS ddl NC_009699.1 554190 555092 D D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase 554190..555092 Clostridium botulinum F str. Langeland 5404169 YP_001389825.1 CDS CLI_0539 NC_009699.1 555248 556390 D identified by match to protein family HMM PF01094; high-affinity branched-chain amino acid ABC transporter amino acid-binding protein 555248..556390 Clostridium botulinum F str. Langeland 5402221 YP_001389826.1 CDS CLI_0540 NC_009699.1 556394 557266 D identified by match to protein family HMM PF02653; high-affinity branched-chain amino acid ABC transporter permease 556394..557266 Clostridium botulinum F str. Langeland 5403546 YP_001389827.1 CDS CLI_0541 NC_009699.1 557267 558211 D identified by match to protein family HMM PF02653; high-affinity branched-chain amino acid ABC transporter permease 557267..558211 Clostridium botulinum F str. Langeland 5402359 YP_001389828.1 CDS CLI_0542 NC_009699.1 558223 558960 D identified by match to protein family HMM PF00005; high-affinity branched chain amino acid ABC transporter ATP-binding protein 558223..558960 Clostridium botulinum F str. Langeland 5405423 YP_001389829.1 CDS CLI_0543 NC_009699.1 558962 559663 D identified by match to protein family HMM PF00005; high-affinity branched chain amino acid ABC transporter ATP-binding protein 558962..559663 Clostridium botulinum F str. Langeland 5403393 YP_001389830.1 CDS CLI_0544 NC_009699.1 559692 560468 D identified by match to protein family HMM PF02596; hypothetical protein 559692..560468 Clostridium botulinum F str. Langeland 5404361 YP_001389831.1 CDS CLI_0545 NC_009699.1 560870 561628 D identified by match to protein family HMM PF06738; hypothetical protein 560870..561628 Clostridium botulinum F str. Langeland 5404619 YP_001389832.1 CDS CLI_0546 NC_009699.1 561622 562065 D hypothetical protein 561622..562065 Clostridium botulinum F str. Langeland 5402582 YP_001389833.1 CDS CLI_0547 NC_009699.1 562364 563815 D identified by match to protein family HMM PF00155; match to protein family HMM PF00392; GntR family transcriptional regulator 562364..563815 Clostridium botulinum F str. Langeland 5404148 YP_001389834.1 CDS CLI_0548 NC_009699.1 563876 564445 D identified by match to protein family HMM PF04011; hypothetical protein 563876..564445 Clostridium botulinum F str. Langeland 5404912 YP_001389835.1 CDS CLI_0549 NC_009699.1 564455 565315 D identified by match to protein family HMM PF04536; beta-propeller domain-containing protein 564455..565315 Clostridium botulinum F str. Langeland 5403650 YP_001389836.1 CDS CLI_0550 NC_009699.1 565479 566372 D identified by match to protein family HMM PF00293; NUDIX family hydrolase 565479..566372 Clostridium botulinum F str. Langeland 5402028 YP_001389837.1 CDS CLI_0551 NC_009699.1 566506 566988 D identified by Glimmer3; hypothetical protein 566506..566988 Clostridium botulinum F str. Langeland 5403618 YP_001389838.1 CDS CLI_0552 NC_009699.1 567164 567688 D hypothetical protein 567164..567688 Clostridium botulinum F str. Langeland 5403217 YP_001389839.1 CDS CLI_0553 NC_009699.1 567690 568280 D identified by match to protein family HMM PF08241; match to protein family HMM PF08242; methlytransferase-like protein 567690..568280 Clostridium botulinum F str. Langeland 5404417 YP_001389840.1 CDS CLI_0554 NC_009699.1 568366 568605 R hypothetical protein complement(568366..568605) Clostridium botulinum F str. Langeland 5402093 YP_001389841.1 CDS CLI_0555 NC_009699.1 568626 569108 R hypothetical protein complement(568626..569108) Clostridium botulinum F str. Langeland 5402037 YP_001389842.1 CDS CLI_0556 NC_009699.1 569725 570954 D identified by match to protein family HMM PF00149; match to protein family HMM TIGR00619; nuclease SbcCD subunit D 569725..570954 Clostridium botulinum F str. Langeland 5404379 YP_001389843.1 CDS sbcC NC_009699.1 570929 574459 D exonuclease SbcC 570929..574459 Clostridium botulinum F str. Langeland 5403999 YP_001389844.1 CDS CLI_0558 NC_009699.1 574494 575042 D identified by match to protein family HMM PF00293; NUDIX family hydrolase 574494..575042 Clostridium botulinum F str. Langeland 5404085 YP_001389845.1 CDS CLI_0559 NC_009699.1 575871 576722 D identified by match to protein family HMM PF02588; hypothetical protein 575871..576722 Clostridium botulinum F str. Langeland 5405108 YP_001389846.1 CDS CLI_0560 NC_009699.1 577188 577553 D identified by match to protein family HMM PF01022; cadmium resistance transcriptional regulator CadC 577188..577553 Clostridium botulinum F str. Langeland 5404572 YP_001389847.1 CDS cadA-1 NC_009699.1 577629 579857 D identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01512; match to protein family HMM TIGR01525; cadmium-translocating P-type ATPase 577629..579857 Clostridium botulinum F str. Langeland 5401971 YP_001389848.1 CDS CLI_0563 NC_009699.1 581114 582490 D identified by match to protein family HMM PF02562; PhoH family protein 581114..582490 Clostridium botulinum F str. Langeland 5403726 YP_001389849.1 CDS CLI_0564 NC_009699.1 582758 583762 D hypothetical protein 582758..583762 Clostridium botulinum F str. Langeland 5405448 YP_001389850.1 CDS CLI_0565 NC_009699.1 583772 584788 D hypothetical protein 583772..584788 Clostridium botulinum F str. Langeland 5403579 YP_001389851.1 CDS CLI_0566 NC_009699.1 585110 585283 D identified by Glimmer3; hypothetical protein 585110..585283 Clostridium botulinum F str. Langeland 5403053 YP_001389852.1 CDS sagB NC_009699.1 585448 586404 D streptolysin associated protein SagB 585448..586404 Clostridium botulinum F str. Langeland 5403706 YP_001389853.1 CDS sagC NC_009699.1 586408 587490 D streptolysin associated protein SagC 586408..587490 Clostridium botulinum F str. Langeland 5404053 YP_001389854.1 CDS sagD NC_009699.1 587506 588864 D identified by match to protein family HMM PF02624; streptolysin associated protein SagD 587506..588864 Clostridium botulinum F str. Langeland 5405073 YP_001389855.1 CDS CLI_0570 NC_009699.1 588839 589477 D identified by match to protein family HMM PF02517; CAAX amino terminal protease family protein 588839..589477 Clostridium botulinum F str. Langeland 5405410 YP_001389856.1 CDS CLI_0571 NC_009699.1 589485 590213 D hypothetical protein 589485..590213 Clostridium botulinum F str. Langeland 5403110 YP_001389857.1 CDS sagG NC_009699.1 590522 591454 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein SagG 590522..591454 Clostridium botulinum F str. Langeland 5404216 YP_001389858.1 CDS sagH NC_009699.1 591466 592590 D identified by match to protein family HMM PF01061; ABC transporter ATP-binding protein/permease SagH 591466..592590 Clostridium botulinum F str. Langeland 5402138 YP_001389859.1 CDS sagI NC_009699.1 592592 593734 D identified by match to protein family HMM PF01061; drug ABC transporter ATP-binding protein/permease 592592..593734 Clostridium botulinum F str. Langeland 5402670 YP_001389860.1 CDS CLI_0575 NC_009699.1 593978 594628 D identified by match to protein family HMM PF02163; metalloprotease 593978..594628 Clostridium botulinum F str. Langeland 5402874 YP_001389861.1 CDS CLI_0576 NC_009699.1 595094 595564 R identified by Glimmer3; hypothetical protein complement(595094..595564) Clostridium botulinum F str. Langeland 5403108 YP_001389862.1 CDS CLI_0577 NC_009699.1 595682 596944 R identified by match to protein family HMM PF00939; match to protein family HMM PF02040; match to protein family HMM PF03600; arsenical pump family protein complement(595682..596944) Clostridium botulinum F str. Langeland 5405116 YP_001389863.1 CDS CLI_0578 NC_009699.1 597071 598387 R hypothetical protein complement(597071..598387) Clostridium botulinum F str. Langeland 5403444 YP_001389864.1 CDS trmB NC_009699.1 598663 599316 D tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 598663..599316 Clostridium botulinum F str. Langeland 5404545 YP_001389865.1 CDS CLI_0580 NC_009699.1 599529 599792 D hypothetical protein 599529..599792 Clostridium botulinum F str. Langeland 5404831 YP_001389866.1 CDS tpx NC_009699.1 599887 600381 R antioxidant activity; thioredoxin-dependent thiol peroxidase; forms homodimers in solution; shows substrate specificity to alkyl hydroperoxides; periplasmic protein; thiol peroxidase complement(599887..600381) Clostridium botulinum F str. Langeland 5402618 YP_001389867.1 CDS fabG NC_009699.1 600752 601495 D Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 600752..601495 Clostridium botulinum F str. Langeland 5402129 YP_001389868.1 CDS CLI_0583 NC_009699.1 601559 602512 D identified by match to protein family HMM PF00072; response regulator 601559..602512 Clostridium botulinum F str. Langeland 5402153 YP_001389869.1 CDS CLI_0584 NC_009699.1 602833 605229 R identified by match to protein family HMM PF00877; match to protein family HMM PF05257; match to protein family HMM PF06347; match to protein family HMM PF08239; cell wall-associated hydrolase complement(602833..605229) Clostridium botulinum F str. Langeland 5403605 YP_001389870.1 CDS CLI_0585 NC_009699.1 605538 606482 D identified by match to protein family HMM PF00561; alpha/beta hydrolase 605538..606482 Clostridium botulinum F str. Langeland 5402296 YP_001389871.1 CDS CLI_0586 NC_009699.1 606744 607991 D identified by match to protein family HMM PF00072; response regulator 606744..607991 Clostridium botulinum F str. Langeland 5404601 YP_001389872.1 CDS CLI_0587 NC_009699.1 608288 608872 D identified by match to protein family HMM PF01966; match to protein family HMM TIGR00277; HDIG domain-containing protein 608288..608872 Clostridium botulinum F str. Langeland 5404667 YP_001389873.1 CDS CLI_0588 NC_009699.1 608908 610938 D identified by match to protein family HMM PF00015; match to protein family HMM PF00672; methyl-accepting chemotaxis protein 608908..610938 Clostridium botulinum F str. Langeland 5403633 YP_001389874.1 CDS CLI_0589 NC_009699.1 611143 611937 D identified by match to protein family HMM PF00072; response regulator 611143..611937 Clostridium botulinum F str. Langeland 5403204 YP_001389875.1 CDS CLI_0590 NC_009699.1 612154 612279 R identified by Glimmer3; hypothetical protein complement(612154..612279) Clostridium botulinum F str. Langeland 5402442 YP_001389876.1 CDS serS-2 NC_009699.1 612770 614047 D identified by match to protein family HMM PF00587; match to protein family HMM PF02403; match to protein family HMM TIGR00414; seryl-tRNA synthetase 612770..614047 Clostridium botulinum F str. Langeland 5404579 YP_001389877.1 CDS CLI_0592 NC_009699.1 614804 617158 D identified by match to protein family HMM PF06733; ATP-dependent helicase 614804..617158 Clostridium botulinum F str. Langeland 5402007 YP_001389878.1 CDS CLI_0593 NC_009699.1 617449 617640 R hypothetical protein complement(617449..617640) Clostridium botulinum F str. Langeland 5402110 YP_001389879.1 CDS CLI_0594 NC_009699.1 618134 618754 R identified by match to protein family HMM PF00392; match to protein family HMM PF02080; match to protein family HMM PF08279; GntR family transcriptional regulator complement(618134..618754) Clostridium botulinum F str. Langeland 5404733 YP_001389880.1 CDS ceo NC_009699.1 619009 619962 D identified by match to protein family HMM PF01262; N(5)-(carboxyethyl)ornithine synthase 619009..619962 Clostridium botulinum F str. Langeland 5402745 YP_001389881.1 CDS CLI_0596 NC_009699.1 620166 622172 R identified by match to protein family HMM PF06874; fructose-1,6-bisphosphatase complement(620166..622172) Clostridium botulinum F str. Langeland 5403880 YP_001389882.1 CDS CLI_0597 NC_009699.1 622456 622818 D identified by Glimmer3; hypothetical protein 622456..622818 Clostridium botulinum F str. Langeland 5405538 YP_001389883.1 CDS CLI_0598 NC_009699.1 623019 623432 D identified by match to protein family HMM PF01814; match to protein family HMM TIGR02481; hemerythrin-like metal-binding domain-containing protein 623019..623432 Clostridium botulinum F str. Langeland 5404249 YP_001389884.1 CDS CLI_0599 NC_009699.1 623646 624341 R identified by Glimmer3; hypothetical protein complement(623646..624341) Clostridium botulinum F str. Langeland 5403342 YP_001389885.1 CDS CLI_0600 NC_009699.1 625093 625515 D identified by Glimmer3; hypothetical protein 625093..625515 Clostridium botulinum F str. Langeland 5404444 YP_001389886.1 CDS CLI_0601 NC_009699.1 625749 626399 R identified by match to protein family HMM PF02777; Fe/Mn family superoxide dismutase complement(625749..626399) Clostridium botulinum F str. Langeland 5403655 YP_001389887.1 CDS CLI_0602 NC_009699.1 626591 627430 D identified by match to protein family HMM PF00753; metallo-beta-lactamase family protein 626591..627430 Clostridium botulinum F str. Langeland 5404034 YP_001389888.1 CDS CLI_0603 NC_009699.1 627528 627827 R hypothetical protein complement(627528..627827) Clostridium botulinum F str. Langeland 5403388 YP_001389889.1 CDS CLI_0604 NC_009699.1 627975 629828 R hypothetical protein complement(627975..629828) Clostridium botulinum F str. Langeland 5402498 YP_001389890.1 CDS CLI_0605 NC_009699.1 631022 631486 R identified by match to protein family HMM PF01037; AsnC family transcriptional regulator complement(631022..631486) Clostridium botulinum F str. Langeland 5404897 YP_001389891.1 CDS CLI_0606 NC_009699.1 632011 632385 D hypothetical protein 632011..632385 Clostridium botulinum F str. Langeland 5405342 YP_001389892.1 CDS CLI_0607 NC_009699.1 633009 634382 D identified by match to protein family HMM PF00324; match to protein family HMM PF03845; amino acid permease 633009..634382 Clostridium botulinum F str. Langeland 5402515 YP_001389893.1 CDS CLI_0608 NC_009699.1 634820 636169 D identified by match to protein family HMM PF00324; match to protein family HMM PF03845; amino acid permease 634820..636169 Clostridium botulinum F str. Langeland 5405556 YP_001389894.1 CDS CLI_0609 NC_009699.1 636517 637026 D identified by match to protein family HMM PF00132; hexapeptide repeat-containing transferase 636517..637026 Clostridium botulinum F str. Langeland 5404648 YP_001389895.1 CDS CLI_0610 NC_009699.1 637071 637943 D identified by match to protein family HMM PF00753; metallo-beta-lactamase family protein 637071..637943 Clostridium botulinum F str. Langeland 5403897 YP_001389896.1 CDS CLI_0611 NC_009699.1 638207 640825 R identified by match to protein family HMM PF00122; match to protein family HMM PF00689; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01517; ATPase P complement(638207..640825) Clostridium botulinum F str. Langeland 5402400 YP_001389897.1 CDS CLI_0612 NC_009699.1 641119 641655 R identified by match to protein family HMM PF02417; chromate transporter protein complement(641119..641655) Clostridium botulinum F str. Langeland 5404927 YP_001389898.1 CDS CLI_0613 NC_009699.1 641655 642191 R identified by match to protein family HMM PF02417; chromate transport protein complement(641655..642191) Clostridium botulinum F str. Langeland 5402017 YP_001389899.1 CDS CLI_0614 NC_009699.1 642365 642955 D identified by match to protein family HMM PF02452; PemK family protein 642365..642955 Clostridium botulinum F str. Langeland 5402269 YP_001389900.1 CDS CLI_0615 NC_009699.1 643402 643827 D identified by match to protein family HMM PF03885; hypothetical protein 643402..643827 Clostridium botulinum F str. Langeland 5405535 YP_001389901.1 CDS nadE NC_009699.1 644032 645948 R catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase complement(644032..645948) Clostridium botulinum F str. Langeland 5405158 YP_001389902.1 CDS CLI_0617 NC_009699.1 646170 646610 D identified by match to protein family HMM PF01957; hypothetical protein 646170..646610 Clostridium botulinum F str. Langeland 5403135 YP_001389903.1 CDS CLI_0618 NC_009699.1 646613 647551 D identified by match to protein family HMM PF01145; hypothetical protein 646613..647551 Clostridium botulinum F str. Langeland 5402725 YP_001389904.1 CDS CLI_0619 NC_009699.1 647913 648320 D CAAX amino terminal protease family protein 647913..648320 Clostridium botulinum F str. Langeland 5404123 YP_001389905.1 CDS pepP NC_009699.1 648942 650177 D identified by match to protein family HMM PF00557; match to protein family HMM PF05195; xaa-pro aminopeptidase 648942..650177 Clostridium botulinum F str. Langeland 5404866 YP_001389906.1 CDS CLI_0621 NC_009699.1 650602 651051 R hypothetical protein complement(650602..651051) Clostridium botulinum F str. Langeland 5405130 YP_001389907.1 CDS CLI_0622 NC_009699.1 651494 651697 R identified by match to protein family HMM PF01381; hypothetical protein complement(651494..651697) Clostridium botulinum F str. Langeland 5402318 YP_001389908.1 CDS CLI_0623 NC_009699.1 651700 652095 R identified by Glimmer3; hypothetical protein complement(651700..652095) Clostridium botulinum F str. Langeland 5405578 YP_001389909.1 CDS CLI_0624 NC_009699.1 652209 652658 R identified by match to protein family HMM PF00583; acetyltransferase complement(652209..652658) Clostridium botulinum F str. Langeland 5405007 YP_001389910.1 CDS CLI_0625 NC_009699.1 653042 653254 D identified by match to protein family HMM PF04324; 2Fe-2S-binding domain-containing protein 653042..653254 Clostridium botulinum F str. Langeland 5403828 YP_001389911.1 CDS CLI_0626 NC_009699.1 653726 653863 D identified by Glimmer3; hypothetical protein 653726..653863 Clostridium botulinum F str. Langeland 5402712 YP_001389912.1 CDS CLI_0627 NC_009699.1 654218 655126 D hypothetical protein 654218..655126 Clostridium botulinum F str. Langeland 5404523 YP_001389913.1 CDS CLI_0628 NC_009699.1 655395 655904 D identified by Glimmer3; hypothetical protein 655395..655904 Clostridium botulinum F str. Langeland 5403236 YP_001389914.1 CDS CLI_0629 NC_009699.1 655916 657559 D identified by match to protein family HMM PF02554; carbon starvation protein CstA 655916..657559 Clostridium botulinum F str. Langeland 5404512 YP_001389915.1 CDS CLI_0630 NC_009699.1 658024 658713 D hypothetical protein 658024..658713 Clostridium botulinum F str. Langeland 5405659 YP_001389916.1 CDS CLI_0631 NC_009699.1 659630 661621 D identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF02743; methyl-accepting chemotaxis protein 659630..661621 Clostridium botulinum F str. Langeland 5403911 YP_001389917.1 CDS CLI_0632 NC_009699.1 662020 663678 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(662020..663678) Clostridium botulinum F str. Langeland 5402970 YP_001389918.1 CDS mscL NC_009699.1 664256 664660 D identified by match to protein family HMM PF01741; match to protein family HMM TIGR00220; large conductance mechanosensitive channel protein 664256..664660 Clostridium botulinum F str. Langeland 5403275 YP_001389919.1 CDS CLI_0634 NC_009699.1 664990 665673 D identified by match to protein family HMM TIGR02357; proton-coupled thiamine transporter YuaJ 664990..665673 Clostridium botulinum F str. Langeland 5404198 YP_001389920.1 CDS CLI_0635 NC_009699.1 665808 665945 R identified by Glimmer3; hypothetical protein complement(665808..665945) Clostridium botulinum F str. Langeland 5405054 YP_001389921.1 CDS CLI_0636 NC_009699.1 666594 667730 D identified by match to protein family HMM PF02810; SecC motif-containing protein 666594..667730 Clostridium botulinum F str. Langeland 5404759 YP_001389922.1 CDS CLI_0637 NC_009699.1 668218 668598 D identified by match to protein family HMM PF00392; GntR family transcriptional regulator 668218..668598 Clostridium botulinum F str. Langeland 5402784 YP_001389923.1 CDS CLI_0638 NC_009699.1 668591 669286 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 668591..669286 Clostridium botulinum F str. Langeland 5404842 YP_001389924.1 CDS CLI_0639 NC_009699.1 669286 670047 D ABC transporter permease 669286..670047 Clostridium botulinum F str. Langeland 5404537 YP_001389925.1 CDS potA NC_009699.1 670958 672040 D identified by match to protein family HMM PF00005; match to protein family HMM PF08402; match to protein family HMM TIGR01187; spermidine/putrescine ABC transporter ATP-binding protein 670958..672040 Clostridium botulinum F str. Langeland 5404042 YP_001389926.1 CDS potB NC_009699.1 672040 673002 D identified by match to protein family HMM PF00528; spermidine/putrescine ABC transporter permease PotB 672040..673002 Clostridium botulinum F str. Langeland 5402447 YP_001389927.1 CDS CLI_0642 NC_009699.1 673005 674846 D identified by match to protein family HMM PF00528; match to protein family HMM PF01547; spermidine/putrescine ABC transporter permease/spermidine/putrescine-binding protein 673005..674846 Clostridium botulinum F str. Langeland 5402430 YP_001389928.1 CDS CLI_0643 NC_009699.1 675070 675939 R identified by match to protein family HMM PF00165; AraC family transcriptional regulator complement(675070..675939) Clostridium botulinum F str. Langeland 5402040 YP_001389929.1 CDS CLI_0644 NC_009699.1 676213 677502 D identified by match to protein family HMM PF00375; proton/sodium-glutamate symport protein 676213..677502 Clostridium botulinum F str. Langeland 5402780 YP_001389930.1 CDS CLI_0645 NC_009699.1 677946 678104 D identified by similarity to GB:AAK81349.1; hypothetical protein 677946..678104 Clostridium botulinum F str. Langeland 5404090 YP_001389931.1 CDS CLI_0646 NC_009699.1 678197 678988 D identified by Glimmer3; hypothetical protein 678197..678988 Clostridium botulinum F str. Langeland 5402625 YP_001389932.1 CDS CLI_0647 NC_009699.1 679139 679576 D identified by match to protein family HMM PF00583; acetyltransferase 679139..679576 Clostridium botulinum F str. Langeland 5402214 YP_001389933.1 CDS CLI_0648 NC_009699.1 679611 680585 D identified by match to protein family HMM PF02517; CAAX amino terminal protease family protein 679611..680585 Clostridium botulinum F str. Langeland 5402708 YP_001389934.1 CDS CLI_0649 NC_009699.1 680928 681776 R identified by match to protein family HMM PF00805; pentapeptide repeat-containing protein complement(680928..681776) Clostridium botulinum F str. Langeland 5402063 YP_001389935.1 CDS CLI_0651 NC_009699.1 682675 682869 D identified by Glimmer3; hypothetical protein 682675..682869 Clostridium botulinum F str. Langeland 5401967 YP_001389936.1 CDS CLI_0652 NC_009699.1 683071 683283 D identified by match to protein family HMM PF01381; DNA binding protein 683071..683283 Clostridium botulinum F str. Langeland 5405488 YP_001389937.1 CDS CLI_0653 NC_009699.1 683273 683710 D identified by Glimmer3; hypothetical protein 683273..683710 Clostridium botulinum F str. Langeland 5405076 YP_001389938.1 CDS lepB-1 NC_009699.1 683778 684386 D identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227; signal peptidase I 683778..684386 Clostridium botulinum F str. Langeland 5403774 YP_001389939.1 CDS CLI_0655 NC_009699.1 685038 685163 R identified by Glimmer3; hypothetical protein complement(685038..685163) Clostridium botulinum F str. Langeland 5402006 YP_001389940.1 CDS CLI_0656 NC_009699.1 685201 685902 D identified by match to protein family HMM PF00072; match to protein family HMM PF04397; LytTr family DNA-binding response regulator 685201..685902 Clostridium botulinum F str. Langeland 5404694 YP_001389941.1 CDS CLI_0657 NC_009699.1 686503 686622 D identified by Glimmer3; hypothetical protein 686503..686622 Clostridium botulinum F str. Langeland 5404267 YP_001389942.1 CDS CLI_0658 NC_009699.1 686662 686787 D identified by Glimmer3; hypothetical protein 686662..686787 Clostridium botulinum F str. Langeland 5403438 YP_001389943.1 CDS CLI_0659 NC_009699.1 687484 687630 D identified by Glimmer3; hypothetical protein 687484..687630 Clostridium botulinum F str. Langeland 5402316 YP_001389944.1 CDS CLI_0660 NC_009699.1 688217 689569 D identified by match to protein family HMM PF04055; radical SAM domain-containing protein 688217..689569 Clostridium botulinum F str. Langeland 5405475 YP_001389945.1 CDS CLI_0661 NC_009699.1 689562 690152 D identified by Glimmer3; hypothetical protein 689562..690152 Clostridium botulinum F str. Langeland 5402833 YP_001389946.1 CDS CLI_0662 NC_009699.1 690189 690686 D hypothetical protein 690189..690686 Clostridium botulinum F str. Langeland 5405507 YP_001389947.1 CDS CLI_0663 NC_009699.1 690721 692433 D identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM PF02463; ABC transporter ATP-binding protein/permease 690721..692433 Clostridium botulinum F str. Langeland 5402958 YP_001389948.1 CDS CLI_0664 NC_009699.1 692607 693356 D lipoprotein 692607..693356 Clostridium botulinum F str. Langeland 5403582 YP_001389949.1 CDS CLI_0665 NC_009699.1 693379 693858 D identified by match to protein family HMM PF00583; acetyltransferase 693379..693858 Clostridium botulinum F str. Langeland 5402246 YP_001389950.1 CDS CLI_0666 NC_009699.1 693855 696323 D identified by match to protein family HMM PF02687; ABC transporter permease 693855..696323 Clostridium botulinum F str. Langeland 5404244 YP_001389951.1 CDS CLI_0667 NC_009699.1 696338 697018 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 696338..697018 Clostridium botulinum F str. Langeland 5405016 YP_001389952.1 CDS CLI_0668 NC_009699.1 697591 698055 D identified by match to protein family HMM PF00583; acetyltransferase 697591..698055 Clostridium botulinum F str. Langeland 5403553 YP_001389953.1 CDS CLI_0669 NC_009699.1 698192 698722 D lipoprotein 698192..698722 Clostridium botulinum F str. Langeland 5404036 YP_001389954.1 CDS CLI_0670 NC_009699.1 698734 698859 R identified by Glimmer3; hypothetical protein complement(698734..698859) Clostridium botulinum F str. Langeland 5405224 YP_001389955.1 CDS CLI_0671 NC_009699.1 699218 699481 D hypothetical protein 699218..699481 Clostridium botulinum F str. Langeland 5404280 YP_001389956.1 CDS CLI_0672 NC_009699.1 699810 700676 D identified by match to protein family HMM PF02645; match to protein family HMM TIGR00762; degV family protein 699810..700676 Clostridium botulinum F str. Langeland 5404999 YP_001389957.1 CDS CLI_0673 NC_009699.1 701074 701586 D hypothetical protein 701074..701586 Clostridium botulinum F str. Langeland 5403458 YP_001389958.1 CDS CLI_0674 NC_009699.1 702073 703983 D identified by match to protein family HMM PF00884; sulfatase family protein 702073..703983 Clostridium botulinum F str. Langeland 5405388 YP_001389959.1 CDS CLI_0675 NC_009699.1 704300 705712 R identified by match to protein family HMM PF00158; match to protein family HMM PF02954; sigma-54 dependent transcriptional regulator complement(704300..705712) Clostridium botulinum F str. Langeland 5401886 YP_001389960.1 CDS CLI_0676 NC_009699.1 706047 707270 R identified by match to protein family HMM PF01773; match to protein family HMM PF07662; match to protein family HMM PF07670; match to protein family HMM TIGR00804; NupC family nucleoside transporter complement(706047..707270) Clostridium botulinum F str. Langeland 5404757 YP_001389961.1 CDS asnC NC_009699.1 708391 709782 D catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase 708391..709782 Clostridium botulinum F str. Langeland 5405390 YP_001389962.1 CDS CLI_0678 NC_009699.1 710076 710396 D identified by match to protein family HMM PF03551; PadR family transcriptional regulator 710076..710396 Clostridium botulinum F str. Langeland 5401859 YP_001389963.1 CDS CLI_0679 NC_009699.1 710413 710949 D hypothetical protein 710413..710949 Clostridium botulinum F str. Langeland 5405118 YP_001389964.1 CDS CLI_0680 NC_009699.1 711153 711608 D identified by match to protein family HMM PF04397; LytR family transcriptional regulator 711153..711608 Clostridium botulinum F str. Langeland 5405570 YP_001389965.1 CDS CLI_0681 NC_009699.1 711610 712311 D hypothetical protein 711610..712311 Clostridium botulinum F str. Langeland 5405203 YP_001389966.1 CDS CLI_0682 NC_009699.1 712731 713618 D identified by match to protein family HMM PF00165; match to protein family HMM PF06445; AraC family transcriptional regulator 712731..713618 Clostridium botulinum F str. Langeland 5403795 YP_001389967.1 CDS CLI_0683 NC_009699.1 714053 714964 D identified by match to protein family HMM PF02517; CAAX amino terminal protease family protein 714053..714964 Clostridium botulinum F str. Langeland 5405293 YP_001389968.1 CDS CLI_0684 NC_009699.1 714977 715369 D identified by match to protein family HMM PF01381; DNA-binding protein 714977..715369 Clostridium botulinum F str. Langeland 5404395 YP_001389969.1 CDS CLI_0685 NC_009699.1 716012 717151 D lipoprotein 716012..717151 Clostridium botulinum F str. Langeland 5405001 YP_001389970.1 CDS CLI_0686 NC_009699.1 717348 718436 D lipoprotein 717348..718436 Clostridium botulinum F str. Langeland 5405584 YP_001389971.1 CDS CLI_0687 NC_009699.1 718612 719295 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 718612..719295 Clostridium botulinum F str. Langeland 5404067 YP_001389972.1 CDS CLI_0688 NC_009699.1 719300 720721 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 719300..720721 Clostridium botulinum F str. Langeland 5403336 YP_001389973.1 CDS CLI_0689 NC_009699.1 721058 721774 D identified by match to protein family HMM PF02557; D-alanyl-D-alanine carboxypeptidase 721058..721774 Clostridium botulinum F str. Langeland 5404399 YP_001389974.1 CDS CLI_0690 NC_009699.1 721795 722487 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 721795..722487 Clostridium botulinum F str. Langeland 5402010 YP_001389975.1 CDS CLI_0691 NC_009699.1 722477 723598 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase 722477..723598 Clostridium botulinum F str. Langeland 5403401 YP_001389976.1 CDS CLI_0692 NC_009699.1 723758 724897 R hypothetical protein complement(723758..724897) Clostridium botulinum F str. Langeland 5405643 YP_001389977.1 CDS CLI_0693 NC_009699.1 725040 725852 R identified by match to protein family HMM PF00072; response regulator complement(725040..725852) Clostridium botulinum F str. Langeland 5404405 YP_001389978.1 CDS CLI_0694 NC_009699.1 725849 727147 R identified by match to protein family HMM PF02518; sensor histidine kinase complement(725849..727147) Clostridium botulinum F str. Langeland 5403691 YP_001389979.1 CDS rodA-1 NC_009699.1 727542 728702 D identified by match to protein family HMM PF01098; match to protein family HMM TIGR02210; rod shape-determining protein RodA 727542..728702 Clostridium botulinum F str. Langeland 5403461 YP_001389980.1 CDS cfa NC_009699.1 729056 730234 R identified by match to protein family HMM PF02353; match to protein family HMM PF08241; match to protein family HMM PF08242; cyclopropane-fatty-acyl-phospholipid synthase complement(729056..730234) Clostridium botulinum F str. Langeland 5403583 YP_001389981.1 CDS CLI_0697 NC_009699.1 730562 731593 D identified by Glimmer3; hypothetical protein 730562..731593 Clostridium botulinum F str. Langeland 5404021 YP_001389982.1 CDS CLI_0698 NC_009699.1 731763 733442 D identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease 731763..733442 Clostridium botulinum F str. Langeland 5402923 YP_001389983.1 CDS cat-1 NC_009699.1 733865 734491 R identified by match to protein family HMM PF00302; chloramphenicol acetyltransferase complement(733865..734491) Clostridium botulinum F str. Langeland 5405646 YP_001389984.1 CDS CLI_0700 NC_009699.1 734656 735309 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 734656..735309 Clostridium botulinum F str. Langeland 5403890 YP_001389985.1 CDS CLI_0701 NC_009699.1 735377 735847 D identified by match to protein family HMM PF00583; acetyltransferase 735377..735847 Clostridium botulinum F str. Langeland 5402211 YP_001389986.1 CDS csaA NC_009699.1 735914 736243 R identified by match to protein family HMM PF01588; match to protein family HMM TIGR02222; csaA protein complement(735914..736243) Clostridium botulinum F str. Langeland 5402870 YP_001389987.1 CDS CLI_0703 NC_009699.1 736451 737182 R identified by match to protein family HMM PF00165; AraC family transcriptional regulator complement(736451..737182) Clostridium botulinum F str. Langeland 5403643 YP_001389988.1 CDS CLI_0704 NC_009699.1 737474 738025 R identified by match to protein family HMM PF01381; match to protein family HMM PF07883; cupin domain-containing protein complement(737474..738025) Clostridium botulinum F str. Langeland 5405361 YP_001389989.1 CDS CLI_0705 NC_009699.1 738282 738872 D identified by match to protein family HMM TIGR00277; HDIG domain-containing protein 738282..738872 Clostridium botulinum F str. Langeland 5403051 YP_001389990.1 CDS CLI_0706 NC_009699.1 739000 739275 D identified by Glimmer3; hypothetical protein 739000..739275 Clostridium botulinum F str. Langeland 5403422 YP_001389991.1 CDS CLI_0707 NC_009699.1 739275 740120 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 739275..740120 Clostridium botulinum F str. Langeland 5402509 YP_001389992.1 CDS CLI_0709 NC_009699.1 740929 742140 R allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase complement(740929..742140) Clostridium botulinum F str. Langeland 5404360 YP_001389993.1 CDS CLI_0710 NC_009699.1 742971 744866 D identified by match to protein family HMM PF00488; MutS domain-containing protein 742971..744866 Clostridium botulinum F str. Langeland 5403199 YP_001389994.1 CDS CLI_0711 NC_009699.1 745041 745643 D hypothetical protein 745041..745643 Clostridium botulinum F str. Langeland 5405557 YP_001389995.1 CDS CLI_0713 NC_009699.1 746139 746612 R identified by match to protein family HMM PF01243; nimA protein complement(746139..746612) Clostridium botulinum F str. Langeland 5405170 YP_001389996.1 CDS CLI_0714 NC_009699.1 746635 747048 R identified by match to protein family HMM PF04304; hypothetical protein complement(746635..747048) Clostridium botulinum F str. Langeland 5404641 YP_001389997.1 CDS CLI_0715 NC_009699.1 747673 748152 D pyridoxamine 5'-phosphate oxidase family protein 747673..748152 Clostridium botulinum F str. Langeland 5403957 YP_001389998.1 CDS CLI_0716 NC_009699.1 748376 748489 R hypothetical protein complement(748376..748489) Clostridium botulinum F str. Langeland 5404436 YP_001389999.1 CDS CLI_0717 NC_009699.1 748826 750235 R identified by match to protein family HMM PF00155; match to protein family HMM PF00392; GntR family transcriptional regulator complement(748826..750235) Clostridium botulinum F str. Langeland 5403592 YP_001390000.1 CDS rhlE NC_009699.1 751059 752336 D identified by match to protein family HMM PF00270; match to protein family HMM PF00271; ATP-dependent RNA helicase RhlE 751059..752336 Clostridium botulinum F str. Langeland 5404393 YP_001390001.1 CDS CLI_0720 NC_009699.1 752925 753413 D identified by match to protein family HMM PF02915; rubrerythrin 752925..753413 Clostridium botulinum F str. Langeland 5405495 YP_001390002.1 CDS CLI_0721 NC_009699.1 753585 754022 D identified by match to protein family HMM PF01047; MarR family transcriptional regulator 753585..754022 Clostridium botulinum F str. Langeland 5405445 YP_001390003.1 CDS CLI_0722 NC_009699.1 754050 755483 D identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; EmrB/QacA family drug resistance transporter 754050..755483 Clostridium botulinum F str. Langeland 5402410 YP_001390004.1 CDS CLI_0723 NC_009699.1 755878 756936 R identified by Glimmer3; hypothetical protein complement(755878..756936) Clostridium botulinum F str. Langeland 5402607 YP_001390005.1 CDS CLI_0724 NC_009699.1 757451 758176 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 757451..758176 Clostridium botulinum F str. Langeland 5402172 YP_001390006.1 CDS CLI_0725 NC_009699.1 758173 759219 D identified by match to protein family HMM PF01061; ABC transporter permease 758173..759219 Clostridium botulinum F str. Langeland 5403096 YP_001390007.1 CDS CLI_0726 NC_009699.1 759335 760009 D identified by similarity to GB:AAK78726.1; hypothetical protein 759335..760009 Clostridium botulinum F str. Langeland 5405508 YP_001390008.1 CDS CLI_0727 NC_009699.1 760297 761487 R hypothetical protein complement(760297..761487) Clostridium botulinum F str. Langeland 5403001 YP_001390009.1 CDS CLI_0728 NC_009699.1 761612 762487 D identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 761612..762487 Clostridium botulinum F str. Langeland 5403085 YP_001390010.1 CDS CLI_0729 NC_009699.1 762526 762750 D identified by Glimmer3; hypothetical protein 762526..762750 Clostridium botulinum F str. Langeland 5405153 YP_001390011.1 CDS CLI_0730 NC_009699.1 763085 763924 D identified by match to protein family HMM PF00874; match to protein family HMM PF03123; BglG family transcriptional antiterminator 763085..763924 Clostridium botulinum F str. Langeland 5401950 YP_001390012.1 CDS CLI_0731 NC_009699.1 764130 765971 D identified by match to protein family HMM PF00358; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00830; match to protein family HMM TIGR01995; PTS system beta-glucoside-specific transporter subunit IIABC 764130..765971 Clostridium botulinum F str. Langeland 5405031 YP_001390013.1 CDS CLI_0732 NC_009699.1 765983 766801 D identified by match to protein family HMM PF02811; phosphotransferase domain-containing protein 765983..766801 Clostridium botulinum F str. Langeland 5404445 YP_001390014.1 CDS CLI_0733 NC_009699.1 767430 768140 D identified by match to protein family HMM PF00027; match to protein family HMM PF00325; Crp/FNR family transcriptional regulator 767430..768140 Clostridium botulinum F str. Langeland 5403806 YP_001390015.1 CDS CLI_0734 NC_009699.1 768298 769530 D identified by match to protein family HMM PF00258; match to protein family HMM PF00753; metallo-beta-lactamase family protein 768298..769530 Clostridium botulinum F str. Langeland 5404882 YP_001390016.1 CDS CLI_0735 NC_009699.1 769590 770288 D identified by match to protein family HMM PF01814; match to protein family HMM PF04405; scdA protein 769590..770288 Clostridium botulinum F str. Langeland 5404061 YP_001390017.1 CDS CLI_0736 NC_009699.1 770314 771069 D identified by match to protein family HMM PF01814; match to protein family HMM PF04282; hypothetical protein 770314..771069 Clostridium botulinum F str. Langeland 5403521 YP_001390018.1 CDS CLI_0737 NC_009699.1 771327 771911 D identified by match to protein family HMM PF03352; methyladenine glycosylase family protein 771327..771911 Clostridium botulinum F str. Langeland 5402260 YP_001390019.1 CDS CLI_0738 NC_009699.1 772079 772498 R hypothetical protein complement(772079..772498) Clostridium botulinum F str. Langeland 5402948 YP_001390020.1 CDS CLI_0739 NC_009699.1 772918 773385 D hypothetical protein 772918..773385 Clostridium botulinum F str. Langeland 5404098 YP_001390021.1 CDS CLI_0740 NC_009699.1 773392 774741 D hypothetical protein 773392..774741 Clostridium botulinum F str. Langeland 5403659 YP_001390022.1 CDS CLI_0741 NC_009699.1 774996 775982 D identified by match to protein family HMM PF00753; metallo-beta-lactamase family protein 774996..775982 Clostridium botulinum F str. Langeland 5404415 YP_001390023.1 CDS CLI_0742 NC_009699.1 776324 777217 D identified by match to protein family HMM PF02653; ABC transporter permease 776324..777217 Clostridium botulinum F str. Langeland 5404356 YP_001390024.1 CDS CLI_0743 NC_009699.1 777180 777935 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 777180..777935 Clostridium botulinum F str. Langeland 5402537 YP_001390025.1 CDS CLI_0744 NC_009699.1 777966 778937 D identified by match to protein family HMM PF04392; ABC transporter substrate-binding protein 777966..778937 Clostridium botulinum F str. Langeland 5402818 YP_001390026.1 CDS blaI NC_009699.1 779439 779819 D identified by similarity to SP:P06555; match to protein family HMM PF03965; penicillinase repressor 779439..779819 Clostridium botulinum F str. Langeland 5402072 YP_001390027.1 CDS CLI_0748 NC_009699.1 782326 783747 R identified by Glimmer3; hypothetical protein complement(782326..783747) Clostridium botulinum F str. Langeland 5404235 YP_001390028.1 CDS CLI_0749 NC_009699.1 783744 784307 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 complement(783744..784307) Clostridium botulinum F str. Langeland 5403611 YP_001390029.1 CDS CLI_0750 NC_009699.1 784748 785686 D identified by match to protein family HMM PF01207; dihydrouridine synthase family protein 784748..785686 Clostridium botulinum F str. Langeland 5403510 YP_001390030.1 CDS greA-1 NC_009699.1 785843 786307 D identified by match to protein family HMM PF01272; match to protein family HMM PF03449; match to protein family HMM TIGR01462; transcription elongation factor GreA 785843..786307 Clostridium botulinum F str. Langeland 5401990 YP_001390031.1 CDS CLI_0752 NC_009699.1 786475 787227 D hypothetical protein 786475..787227 Clostridium botulinum F str. Langeland 5405131 YP_001390032.1 CDS CLI_0753 NC_009699.1 787712 788533 D identified by match to protein family HMM PF00165; AraC family transcriptional regulator 787712..788533 Clostridium botulinum F str. Langeland 5404295 YP_001390033.1 CDS CLI_0754 NC_009699.1 788656 788775 R identified by Glimmer3; hypothetical protein complement(788656..788775) Clostridium botulinum F str. Langeland 5405317 YP_001390034.1 CDS CLI_0755 NC_009699.1 789019 790008 D identified by match to protein family HMM PF01497; ferrichrome ABC transporter ferrichrome-binding protein 789019..790008 Clostridium botulinum F str. Langeland 5403573 YP_001390035.1 CDS fhuB NC_009699.1 790104 791144 D identified by match to protein family HMM PF01032; ferrichrome ABC transporter permease FhuB 790104..791144 Clostridium botulinum F str. Langeland 5402896 YP_001390036.1 CDS fhuG NC_009699.1 791144 792184 D identified by match to protein family HMM PF01032; ferrichrome ABC transporter permease FhuG 791144..792184 Clostridium botulinum F str. Langeland 5402357 YP_001390037.1 CDS fhuC NC_009699.1 792458 793243 D identified by match to protein family HMM PF00005; ferrichrome ABC transporter ATP-binding protein 792458..793243 Clostridium botulinum F str. Langeland 5405518 YP_001390038.1 CDS nifH NC_009699.1 793273 794022 D identified by match to protein family HMM PF00142; nitrogenase iron protein 793273..794022 Clostridium botulinum F str. Langeland 5404950 YP_001390039.1 CDS CLI_0760 NC_009699.1 794025 795293 D identified by Glimmer3; hypothetical protein 794025..795293 Clostridium botulinum F str. Langeland 5402559 YP_001390040.1 CDS CLI_0761 NC_009699.1 795333 796571 D identified by Glimmer3; hypothetical protein 795333..796571 Clostridium botulinum F str. Langeland 5403265 YP_001390041.1 CDS CLI_0762 NC_009699.1 797018 799030 D identified by match to protein family HMM PF00015; match to protein family HMM PF00672; methyl-accepting chemotaxis protein 797018..799030 Clostridium botulinum F str. Langeland 5403741 YP_001390042.1 CDS CLI_0764 NC_009699.1 799326 800723 R hypothetical protein complement(799326..800723) Clostridium botulinum F str. Langeland 5403261 YP_001390043.1 CDS gcvT NC_009699.1 801302 802414 D catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 801302..802414 Clostridium botulinum F str. Langeland 5404760 YP_001390044.1 CDS gcvH NC_009699.1 802680 803072 D part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 802680..803072 Clostridium botulinum F str. Langeland 5405567 YP_001390045.1 CDS gcvPA NC_009699.1 803075 804415 D acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein; glycine dehydrogenase subunit 1 803075..804415 Clostridium botulinum F str. Langeland 5404094 YP_001390046.1 CDS CLI_0768 NC_009699.1 804415 805869 D acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; glycine dehydrogenase subunit 2 804415..805869 Clostridium botulinum F str. Langeland 5405574 YP_001390047.1 CDS lpdA NC_009699.1 806265 807653 D identified by match to protein family HMM PF00070; match to protein family HMM PF01134; match to protein family HMM PF02852; match to protein family HMM PF03486; match to protein family HMM PF07992; match to protein family HMM TIGR01350; dihydrolipoyl dehydrogenase 806265..807653 Clostridium botulinum F str. Langeland 5404869 YP_001390048.1 CDS CLI_0770 NC_009699.1 807671 808648 D identified by match to protein family HMM PF03099; match to protein family HMM TIGR00545; lipoate-protein ligase A 807671..808648 Clostridium botulinum F str. Langeland 5404699 YP_001390049.1 CDS CLI_0771 NC_009699.1 809057 810970 D identified by Glimmer3; hypothetical protein 809057..810970 Clostridium botulinum F str. Langeland 5403168 YP_001390050.1 CDS CLI_0772 NC_009699.1 811044 811229 D identified by similarity to GB:AAK81458.1; hypothetical protein 811044..811229 Clostridium botulinum F str. Langeland 5403664 YP_001390051.1 CDS CLI_0773 NC_009699.1 811216 811398 D identified by similarity to GB:AAK81458.1; hypothetical protein 811216..811398 Clostridium botulinum F str. Langeland 5402742 YP_001390052.1 CDS CLI_0774 NC_009699.1 811464 812183 D identified by similarity to GB:AAZ69210.1; hypothetical protein 811464..812183 Clostridium botulinum F str. Langeland 5402466 YP_001390053.1 CDS CLI_0775 NC_009699.1 812405 812860 D identified by Glimmer3; hypothetical protein 812405..812860 Clostridium botulinum F str. Langeland 5405656 YP_001390054.1 CDS CLI_0777 NC_009699.1 814412 814669 D identified by similarity to GB:ABF36171.1; hypothetical protein 814412..814669 Clostridium botulinum F str. Langeland 5401973 YP_001390055.1 CDS CLI_0778 NC_009699.1 815062 815628 D identified by match to protein family HMM PF00583; acetyltransferase 815062..815628 Clostridium botulinum F str. Langeland 5402847 YP_001390056.1 CDS CLI_0780 NC_009699.1 816913 817611 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 816913..817611 Clostridium botulinum F str. Langeland 5403678 YP_001390057.1 CDS CLI_0781 NC_009699.1 817608 818645 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase 817608..818645 Clostridium botulinum F str. Langeland 5403321 YP_001390058.1 CDS CLI_0782 NC_009699.1 818718 819401 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 818718..819401 Clostridium botulinum F str. Langeland 5402968 YP_001390059.1 CDS CLI_0783 NC_009699.1 819398 821200 D identified by match to protein family HMM PF02687; ABC transporter permease 819398..821200 Clostridium botulinum F str. Langeland 5403740 YP_001390060.1 CDS CLI_0784 NC_009699.1 821956 822444 D identified by match to protein family HMM PF01047; MarR family transcriptional regulator 821956..822444 Clostridium botulinum F str. Langeland 5402711 YP_001390061.1 CDS CLI_0785 NC_009699.1 822676 823263 D identified by match to protein family HMM PF03358; NADPH-dependent FMN reductase 822676..823263 Clostridium botulinum F str. Langeland 5402926 YP_001390062.1 CDS CLI_0786 NC_009699.1 823626 823760 D identified by Glimmer3; hypothetical protein 823626..823760 Clostridium botulinum F str. Langeland 5403330 YP_001390063.1 CDS CLI_0787 NC_009699.1 823801 824355 D identified by Glimmer3; hypothetical protein 823801..824355 Clostridium botulinum F str. Langeland 5404173 YP_001390064.1 CDS CLI_0788 NC_009699.1 824594 825373 D identified by match to protein family HMM PF00376; MerR family transcriptional regulator 824594..825373 Clostridium botulinum F str. Langeland 5403434 YP_001390065.1 CDS CLI_0792 NC_009699.1 827270 827716 D identified by similarity to SP:Q04945; dehydrogenase domain-containing protein 827270..827716 Clostridium botulinum F str. Langeland 5404747 YP_001390066.1 CDS CLI_0793 NC_009699.1 827813 827959 D identified by Glimmer3; hypothetical protein 827813..827959 Clostridium botulinum F str. Langeland 5403280 YP_001390067.1 CDS CLI_0794 NC_009699.1 828046 829740 D similar to streptococcal 67 kDa myosin-cross-reactive antigen family protein; in group A Streptococci this protein was found to cross react with anti myosin antibodies and may play a role in rheumatic fever; myosin-cross-reactive antigen 828046..829740 Clostridium botulinum F str. Langeland 5405486 YP_001390068.1 CDS CLI_0795 NC_009699.1 830889 831104 D identified by similarity to GB:CAG37045.1; hypothetical protein 830889..831104 Clostridium botulinum F str. Langeland 5402852 YP_001390069.1 CDS CLI_0796 NC_009699.1 831444 832175 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 831444..832175 Clostridium botulinum F str. Langeland 5404358 YP_001390070.1 CDS CLI_0797 NC_009699.1 832162 832905 D identified by match to protein family HMM PF01061; drug resistance ABC-2 type transporter, permease 832162..832905 Clostridium botulinum F str. Langeland 5402479 YP_001390071.1 CDS CLI_0798 NC_009699.1 833365 834246 R identified by match to protein family HMM PF00892; match to protein family HMM PF03151; EamA family protein complement(833365..834246) Clostridium botulinum F str. Langeland 5404977 YP_003204972.1 CDS CLI_0799 NC_009699.1 834384 834932 D identified by match to protein family HMM PF01381; match to protein family HMM PF07883; hypothetical protein 834384..834932 Clostridium botulinum F str. Langeland 5403379 YP_001390072.1 CDS CLI_0800 NC_009699.1 835932 837323 D identified by Glimmer3; hypothetical protein 835932..837323 Clostridium botulinum F str. Langeland 5402098 YP_001390073.1 CDS CLI_0801 NC_009699.1 837588 838025 D identified by match to protein family HMM PF00583; acetyltransferase 837588..838025 Clostridium botulinum F str. Langeland 5403480 YP_001390074.1 CDS CLI_0802 NC_009699.1 838333 838488 D identified by Glimmer3; hypothetical protein 838333..838488 Clostridium botulinum F str. Langeland 5402449 YP_001390075.1 CDS CLI_0803 NC_009699.1 838439 838555 D identified by Glimmer3; hypothetical protein 838439..838555 Clostridium botulinum F str. Langeland 5405291 YP_001390076.1 CDS CLI_0804 NC_009699.1 838611 839576 D identified by match to protein family HMM PF00165; AraC family transcriptional regulator 838611..839576 Clostridium botulinum F str. Langeland 5402250 YP_001390077.1 CDS CLI_0805 NC_009699.1 839662 839922 D identified by match to protein family HMM PF04994; tfoX domain-containing protein 839662..839922 Clostridium botulinum F str. Langeland 5405654 YP_001390078.1 CDS CLI_0806 NC_009699.1 840051 841049 R identified by match to protein family HMM PF08541; match to protein family HMM PF08545; 3-oxoacyl-ACP synthase complement(840051..841049) Clostridium botulinum F str. Langeland 5404986 YP_001390079.1 CDS CLI_0807 NC_009699.1 841299 842765 D identified by match to protein family HMM PF00015; methyl-accepting chemotaxis protein 841299..842765 Clostridium botulinum F str. Langeland 5404065 YP_001390080.1 CDS CLI_0808 NC_009699.1 843324 843614 D hypothetical protein 843324..843614 Clostridium botulinum F str. Langeland 5402182 YP_001390081.1 CDS CLI_0809 NC_009699.1 843824 845377 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 843824..845377 Clostridium botulinum F str. Langeland 5402791 YP_001390082.1 CDS CLI_0810 NC_009699.1 845784 846713 D identified by match to protein family HMM PF08220; match to protein family HMM PF08279; transcriptional regulator 845784..846713 Clostridium botulinum F str. Langeland 5404596 YP_001390083.1 CDS CLI_0811 NC_009699.1 846818 847444 D identified by match to protein family HMM PF01965; DJ-1/PfpI family protein 846818..847444 Clostridium botulinum F str. Langeland 5402950 YP_001390084.1 CDS CLI_0812 NC_009699.1 847536 848006 D identified by Glimmer3; hypothetical protein 847536..848006 Clostridium botulinum F str. Langeland 5403137 YP_001390085.1 CDS CLI_0813 NC_009699.1 848205 849113 R identified by match to protein family HMM PF00291; cysteine synthase complement(848205..849113) Clostridium botulinum F str. Langeland 5404047 YP_001390086.1 CDS luxS NC_009699.1 849097 849549 R catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase complement(849097..849549) Clostridium botulinum F str. Langeland 5402444 YP_001390087.1 CDS metC NC_009699.1 849551 850693 R identified by match to protein family HMM PF01053; match to protein family HMM PF01212; cystathionine beta-lyase complement(849551..850693) Clostridium botulinum F str. Langeland 5402104 YP_001390088.1 CDS CLI_0816 NC_009699.1 850794 851420 R identified by match to protein family HMM PF01209; match to protein family HMM PF02390; match to protein family HMM PF08241; match to protein family HMM PF08242; hypothetical protein complement(850794..851420) Clostridium botulinum F str. Langeland 5404730 YP_001390089.1 CDS CLI_0817 NC_009699.1 851972 852091 R identified by Glimmer3; hypothetical protein complement(851972..852091) Clostridium botulinum F str. Langeland 5405064 YP_001390090.1 CDS CLI_0818 NC_009699.1 852330 854183 D identified by match to protein family HMM PF00704; glycosyl hydrolase family protein 852330..854183 Clostridium botulinum F str. Langeland 5404387 YP_001390091.1 CDS CLI_0819 NC_009699.1 854549 854788 D identified by match to protein family HMM PF00403; mercuric transport periplasmic protein 854549..854788 Clostridium botulinum F str. Langeland 5402510 YP_001390092.1 CDS CLI_0820 NC_009699.1 854896 855228 R hypothetical protein complement(854896..855228) Clostridium botulinum F str. Langeland 5405238 YP_001390093.1 CDS CLI_0821 NC_009699.1 855316 855816 R identified by match to protein family HMM PF06172; hypothetical protein complement(855316..855816) Clostridium botulinum F str. Langeland 5401896 YP_001390094.1 CDS CLI_0822 NC_009699.1 856320 856928 R identified by Glimmer3; hypothetical protein complement(856320..856928) Clostridium botulinum F str. Langeland 5404107 YP_001390095.1 CDS CLI_0823 NC_009699.1 857021 857443 R identified by match to protein family HMM PF01381; DNA-binding protein complement(857021..857443) Clostridium botulinum F str. Langeland 5404621 YP_001390096.1 CDS CLI_0824 NC_009699.1 857587 857787 D identified by match to protein family HMM PF01381; DNA-binding protein 857587..857787 Clostridium botulinum F str. Langeland 5401902 YP_001390097.1 CDS CLI_0825 NC_009699.1 858012 859151 D identified by match to protein family HMM PF04271; match to protein family HMM TIGR01446; phage protein 858012..859151 Clostridium botulinum F str. Langeland 5402651 YP_001390098.1 CDS CLI_0826 NC_009699.1 859170 859709 D identified by match to protein family HMM TIGR02937; sigma-70 family RNA polymerase sigma factor 859170..859709 Clostridium botulinum F str. Langeland 5401949 YP_001390099.1 CDS CLI_0827 NC_009699.1 859814 859993 D hypothetical protein 859814..859993 Clostridium botulinum F str. Langeland 5403468 YP_001390100.1 CDS CLI_0828 NC_009699.1 860238 861068 D identified by Glimmer3; hypothetical protein 860238..861068 Clostridium botulinum F str. Langeland 5403049 YP_001390101.1 CDS CLI_0829 NC_009699.1 861487 861708 D hypothetical protein 861487..861708 Clostridium botulinum F str. Langeland 5403715 YP_001390102.1 CDS CLI_0830 NC_009699.1 861728 861955 D identified by similarity to GB:CAJ67452.1; hypothetical protein 861728..861955 Clostridium botulinum F str. Langeland 5402572 YP_001390103.1 CDS CLI_0831 NC_009699.1 862199 863176 R identified by match to protein family HMM PF01476; match to protein family HMM PF07485; LysM domain-containing protein complement(862199..863176) Clostridium botulinum F str. Langeland 5401929 YP_001390104.1 CDS CLI_0832 NC_009699.1 863441 863857 D identified by similarity to SP:Q01257; match to protein family HMM PF01451; arsenate reductase 863441..863857 Clostridium botulinum F str. Langeland 5402494 YP_001390105.1 CDS arsR NC_009699.1 864223 864546 D identified by match to protein family HMM PF01022; arsenical resistance operon repressor ArsR 864223..864546 Clostridium botulinum F str. Langeland 5404456 YP_001390106.1 CDS arsD NC_009699.1 864570 864941 D identified by match to protein family HMM PF06953; arsenical resistence operon repressor ArsD 864570..864941 Clostridium botulinum F str. Langeland 5405450 YP_001390107.1 CDS arsA NC_009699.1 864960 866705 D identified by match to protein family HMM PF02374; match to protein family HMM TIGR00345; arsenical pump-driving ATPase ArsA 864960..866705 Clostridium botulinum F str. Langeland 5405313 YP_001390108.1 CDS arsB NC_009699.1 866804 867874 D identified by match to protein family HMM PF01758; match to protein family HMM TIGR00832; arsenical-resistance protein 866804..867874 Clostridium botulinum F str. Langeland 5402156 YP_001390109.1 CDS CLI_0837 NC_009699.1 867928 868128 D identified by Glimmer3; hypothetical protein 867928..868128 Clostridium botulinum F str. Langeland 5402209 YP_001390110.1 CDS CLI_0838 NC_009699.1 868323 868763 R identified by match to protein family HMM TIGR01909; hypothetical protein complement(868323..868763) Clostridium botulinum F str. Langeland 5402826 YP_001390111.1 CDS CLI_0839 NC_009699.1 869083 869400 D identified by match to protein family HMM PF01022; arsenical resistance operon repressor 869083..869400 Clostridium botulinum F str. Langeland 5402348 YP_001390112.1 CDS CLI_0840 NC_009699.1 869547 870353 D Selenoprotein. identified by match to protein family HMM PF01209; match to protein family HMM PF08241; match to protein family HMM PF08242; UbiE/COQ5 family methlytransferase 869547..870353 Clostridium botulinum F str. Langeland 5404719 YP_001390113.1 CDS CLI_0841 NC_009699.1 870665 871213 D identified by match to protein family HMM PF00300; phosphoglycerate mutase family protein 870665..871213 Clostridium botulinum F str. Langeland 5402070 YP_001390114.1 CDS CLI_0842 NC_009699.1 871435 871626 D hypothetical protein 871435..871626 Clostridium botulinum F str. Langeland 5405050 YP_001390115.1 CDS CLI_0843 NC_009699.1 871619 871747 D identified by Glimmer3; hypothetical protein 871619..871747 Clostridium botulinum F str. Langeland 5403254 YP_001390116.1 CDS CLI_0844 NC_009699.1 871988 872353 D arsenate reductase 871988..872353 Clostridium botulinum F str. Langeland 5405560 YP_001390117.1 CDS CLI_0845 NC_009699.1 872585 874057 R toxin complex component ORF-X3 complement(872585..874057) Clostridium botulinum F str. Langeland 5402343 YP_001390118.1 CDS CLI_0846 NC_009699.1 874096 876348 R identified by similarity to GB:AAR89497.1; toxin complex component ORF-X2 complement(874096..876348) Clostridium botulinum F str. Langeland 5402102 YP_001390119.1 CDS CLI_0847 NC_009699.1 876362 876790 R toxin complex component ORF-X1 complement(876362..876790) Clostridium botulinum F str. Langeland 5404470 YP_001390120.1 CDS botR NC_009699.1 878126 878662 R identified by similarity to PIR:S68219; match to protein family HMM PF08281; match to protein family HMM TIGR02937; match to protein family HMM TIGR03209; transcriptional regulator BotR, P-21 complement(878126..878662) Clostridium botulinum F str. Langeland 5402141 YP_001390121.1 CDS p47 NC_009699.1 878867 880117 D identified by match to protein family HMM PF06597; hypothetical protein 878867..880117 Clostridium botulinum F str. Langeland 5402535 YP_001390122.1 CDS ntnH NC_009699.1 880133 883624 D identified by similarity to GB:CAA67511.1; match to protein family HMM PF01742; match to protein family HMM PF07953; match to protein family HMM PF08470; botulinum neurotoxin type A1 nontoxic-nonhemagglutinin subunit 880133..883624 Clostridium botulinum F str. Langeland 5404039 YP_001390123.1 CDS boNT/A1 NC_009699.1 883635 887471 D identified by similarity to SP:P30996; match to protein family HMM PF01742; match to protein family HMM PF07951; match to protein family HMM PF07952; match to protein family HMM PF07953; botulinum neurotoxin type A1 883635..887471 Clostridium botulinum F str. Langeland 5402165 YP_001390124.1 CDS CLI_0852 NC_009699.1 888076 889005 D identified by match to protein family HMM PF01183; match to protein family HMM PF01471; glycosyl hydrolase family protein 888076..889005 Clostridium botulinum F str. Langeland 5404939 YP_001390125.1 CDS CLI_0853 NC_009699.1 889884 890345 D hypothetical protein 889884..890345 Clostridium botulinum F str. Langeland 5403271 YP_001390126.1 CDS thyA NC_009699.1 890335 891309 D identified by match to protein family HMM PF00303; thymidylate synthase 890335..891309 Clostridium botulinum F str. Langeland 5402746 YP_001390127.1 CDS CLI_0855 NC_009699.1 891321 892079 D identified by match to protein family HMM PF01209; match to protein family HMM PF08241; match to protein family HMM PF08242; UbiE/COQ5 family methlytransferase 891321..892079 Clostridium botulinum F str. Langeland 5403851 YP_001390128.1 CDS CLI_0856 NC_009699.1 892125 893339 D thiaminase I 892125..893339 Clostridium botulinum F str. Langeland 5404349 YP_001390129.1 CDS thiD-2 NC_009699.1 893417 894244 D identified by match to protein family HMM PF08543; match to protein family HMM TIGR00097; phosphomethylpyrimidine kinase 893417..894244 Clostridium botulinum F str. Langeland 5405533 YP_001390130.1 CDS CLI_0858 NC_009699.1 894416 894649 D identified by Glimmer3; hypothetical protein 894416..894649 Clostridium botulinum F str. Langeland 5402731 YP_001390131.1 CDS CLI_0859 NC_009699.1 895072 895536 R identified by match to protein family HMM PF06695; small multidrug export protein complement(895072..895536) Clostridium botulinum F str. Langeland 5404050 YP_001390132.1 CDS CLI_0860 NC_009699.1 895932 896720 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 895932..896720 Clostridium botulinum F str. Langeland 5404725 YP_001390133.1 CDS CLI_0861 NC_009699.1 896723 898420 D hypothetical protein 896723..898420 Clostridium botulinum F str. Langeland 5405080 YP_001390134.1 CDS CLI_0862 NC_009699.1 898694 899386 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 898694..899386 Clostridium botulinum F str. Langeland 5405529 YP_001390135.1 CDS CLI_0863 NC_009699.1 899763 900683 D identified by match to protein family HMM PF00005; bacitracin ABC transporter ATP-binding protein 899763..900683 Clostridium botulinum F str. Langeland 5402550 YP_001390136.1 CDS CLI_0864 NC_009699.1 900683 901474 D hypothetical protein 900683..901474 Clostridium botulinum F str. Langeland 5403299 YP_001390137.1 CDS CLI_0865 NC_009699.1 901597 902454 D identified by match to protein family HMM PF00165; match to protein family HMM PF06445; AraC family transcriptional regulator 901597..902454 Clostridium botulinum F str. Langeland 5402409 YP_001390138.1 CDS CLI_0866 NC_009699.1 902499 903404 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase 902499..903404 Clostridium botulinum F str. Langeland 5401840 YP_001390139.1 CDS CLI_0867 NC_009699.1 904276 905304 D hypothetical protein 904276..905304 Clostridium botulinum F str. Langeland 5401930 YP_001390140.1 CDS CLI_0868 NC_009699.1 905584 906627 D hypothetical protein 905584..906627 Clostridium botulinum F str. Langeland 5405255 YP_001390141.1 CDS CLI_0869 NC_009699.1 906811 907503 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 906811..907503 Clostridium botulinum F str. Langeland 5404150 YP_001390142.1 CDS CLI_0870 NC_009699.1 907490 910156 D identified by match to protein family HMM PF02687; ABC transporter permease 907490..910156 Clostridium botulinum F str. Langeland 5402556 YP_001390143.1 CDS CLI_0871 NC_009699.1 910668 910787 D identified by Glimmer3; hypothetical protein 910668..910787 Clostridium botulinum F str. Langeland 5404135 YP_001390144.1 CDS CLI_0872 NC_009699.1 911015 911728 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 911015..911728 Clostridium botulinum F str. Langeland 5404672 YP_001390145.1 CDS CLI_0873 NC_009699.1 911882 913144 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase 911882..913144 Clostridium botulinum F str. Langeland 5404165 YP_001390146.1 CDS CLI_0874 NC_009699.1 913333 913974 D identified by match to protein family HMM PF06555; hypothetical protein 913333..913974 Clostridium botulinum F str. Langeland 5404341 YP_001390147.1 CDS CLI_0875 NC_009699.1 914243 914440 R identified by match to protein family HMM TIGR02861; small acid-soluble spore protein, H-type complement(914243..914440) Clostridium botulinum F str. Langeland 5404975 YP_001390148.1 CDS CLI_0876 NC_009699.1 914770 915549 D hypothetical protein 914770..915549 Clostridium botulinum F str. Langeland 5402142 YP_001390149.1 CDS dapB-1 NC_009699.1 916224 917021 D identified by match to protein family HMM PF01113; match to protein family HMM PF05173; match to protein family HMM TIGR00036; dihydrodipicolinate reductase 916224..917021 Clostridium botulinum F str. Langeland 5405655 YP_001390150.1 CDS CLI_0878 NC_009699.1 917043 917882 D identified by match to protein family HMM PF00581; sulfurtransferase family protein 917043..917882 Clostridium botulinum F str. Langeland 5403270 YP_001390151.1 CDS CLI_0879 NC_009699.1 918526 919728 D identified by Glimmer3; hypothetical protein 918526..919728 Clostridium botulinum F str. Langeland 5402530 YP_001390152.1 CDS CLI_0880 NC_009699.1 920520 921596 D identified by Glimmer3; hypothetical protein 920520..921596 Clostridium botulinum F str. Langeland 5405296 YP_001390153.1 CDS CLI_0881 NC_009699.1 922128 925703 D hypothetical protein 922128..925703 Clostridium botulinum F str. Langeland 5405634 YP_001390154.1 CDS CLI_0882 NC_009699.1 925669 925782 D identified by Glimmer3; hypothetical protein 925669..925782 Clostridium botulinum F str. Langeland 5403274 YP_001390155.1 CDS CLI_0883 NC_009699.1 926370 926642 R identified by Glimmer3; hypothetical protein complement(926370..926642) Clostridium botulinum F str. Langeland 5404967 YP_001390156.1 CDS CLI_0884 NC_009699.1 927471 929540 D identified by Glimmer3; hypothetical protein 927471..929540 Clostridium botulinum F str. Langeland 5405585 YP_001390157.1 CDS CLI_0885 NC_009699.1 929967 930638 D identified by Glimmer3; hypothetical protein 929967..930638 Clostridium botulinum F str. Langeland 5404183 YP_001390158.1 CDS CLI_0887 NC_009699.1 931650 932072 D identified by match to protein family HMM PF00903; glyoxalase family protein 931650..932072 Clostridium botulinum F str. Langeland 5405030 YP_001390159.1 CDS CLI_0888 NC_009699.1 932138 933586 D identified by match to protein family HMM PF00144; beta-lactamase 932138..933586 Clostridium botulinum F str. Langeland 5403861 YP_001390160.1 CDS CLI_0889 NC_009699.1 933779 934384 D identified by match to protein family HMM PF01381; DNA-binding protein 933779..934384 Clostridium botulinum F str. Langeland 5404964 YP_001390161.1 CDS CLI_0890 NC_009699.1 934627 934773 D hypothetical protein 934627..934773 Clostridium botulinum F str. Langeland 5402405 YP_001390162.1 CDS CLI_0891 NC_009699.1 934889 935077 D hypothetical protein 934889..935077 Clostridium botulinum F str. Langeland 5402018 YP_001390163.1 CDS CLI_0892 NC_009699.1 935609 937015 D identified by Glimmer3; hypothetical protein 935609..937015 Clostridium botulinum F str. Langeland 5405327 YP_001390164.1 CDS CLI_0893 NC_009699.1 937353 938522 D identified by match to protein family HMM PF01979; amidohydrolase 937353..938522 Clostridium botulinum F str. Langeland 5403429 YP_001390165.1 CDS brnQ-1 NC_009699.1 939217 940518 D identified by match to protein family HMM PF05525; match to protein family HMM TIGR00796; branched-chain amino acid transport system II carrier protein 939217..940518 Clostridium botulinum F str. Langeland 5403060 YP_001390166.1 CDS brnQ-2 NC_009699.1 940684 942000 D identified by match to protein family HMM PF05525; match to protein family HMM TIGR00796; branched-chain amino acid transport system II carrier protein 940684..942000 Clostridium botulinum F str. Langeland 5404938 YP_001390167.1 CDS CLI_0896 NC_009699.1 942079 944559 R identified by match to protein family HMM PF00015; match to protein family HMM PF00496; methyl-accepting chemotaxis protein/ extracellular solute-binding protein family 5 complement(942079..944559) Clostridium botulinum F str. Langeland 5402793 YP_001390168.1 CDS feoA-1 NC_009699.1 944782 945018 D identified by match to protein family HMM PF04023; ferrous iron transport protein A 944782..945018 Clostridium botulinum F str. Langeland 5403756 YP_001390169.1 CDS cobC NC_009699.1 948194 948808 D identified by match to protein family HMM PF00300; match to protein family HMM TIGR03162; alpha-ribazole-5'-phosphate phosphatase 948194..948808 Clostridium botulinum F str. Langeland 5403965 YP_001390170.1 CDS CLI_0901 NC_009699.1 948953 950515 D identified by match to protein family HMM PF04294; match to protein family HMM PF07501; von Willebrand factor A 948953..950515 Clostridium botulinum F str. Langeland 5401931 YP_001390171.1 CDS cobS NC_009699.1 950915 951661 D catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole; cobalamin synthase 950915..951661 Clostridium botulinum F str. Langeland 5402634 YP_001390172.1 CDS CLI_0903 NC_009699.1 951898 952683 D hypothetical protein 951898..952683 Clostridium botulinum F str. Langeland 5403587 YP_001390173.1 CDS CLI_0904 NC_009699.1 952839 953111 D hypothetical protein 952839..953111 Clostridium botulinum F str. Langeland 5404428 YP_001390174.1 CDS CLI_0905 NC_009699.1 953253 953435 D hypothetical protein 953253..953435 Clostridium botulinum F str. Langeland 5405282 YP_001390175.1 CDS CLI_0906 NC_009699.1 953453 953701 D identified by match to protein family HMM PF07875; hypothetical protein 953453..953701 Clostridium botulinum F str. Langeland 5403960 YP_001390176.1 CDS CLI_0907 NC_009699.1 954270 955619 D hypothetical protein 954270..955619 Clostridium botulinum F str. Langeland 5405047 YP_001390177.1 CDS CLI_0908 NC_009699.1 955797 956129 R identified by match to protein family HMM PF08821; CGGC domain-containing protein complement(955797..956129) Clostridium botulinum F str. Langeland 5405631 YP_001390178.1 CDS CLI_0909 NC_009699.1 956414 956767 D identified by match to protein family HMM PF01242; match to protein family HMM TIGR03367; 6-pyruvoyl-tetrahydropterin synthase 956414..956767 Clostridium botulinum F str. Langeland 5403990 YP_001390179.1 CDS folP NC_009699.1 956871 958058 D identified by match to protein family HMM PF00809; match to protein family HMM TIGR01496; dihydropteroate synthase 956871..958058 Clostridium botulinum F str. Langeland 5404716 YP_001390180.1 CDS CLI_0911 NC_009699.1 958221 958472 D hypothetical protein 958221..958472 Clostridium botulinum F str. Langeland 5403753 YP_001390181.1 CDS folK NC_009699.1 958573 959028 D identified by match to protein family HMM PF01288; match to protein family HMM TIGR01498; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 958573..959028 Clostridium botulinum F str. Langeland 5403971 YP_001390182.1 CDS CLI_0913 NC_009699.1 959147 959587 D identified by match to protein family HMM PF00011; heat shock protein 959147..959587 Clostridium botulinum F str. Langeland 5404519 YP_001390183.1 CDS CLI_0914 NC_009699.1 959944 961233 D identified by match to protein family HMM PF00376; match to protein family HMM PF01209; match to protein family HMM PF08241; match to protein family HMM PF08242; MerR family transcriptional regulator 959944..961233 Clostridium botulinum F str. Langeland 5403045 YP_001390184.1 CDS CLI_0915 NC_009699.1 961288 962463 D identified by match to protein family HMM PF01041; exopolysaccharide biosynthesis protein 961288..962463 Clostridium botulinum F str. Langeland 5402654 YP_001390185.1 CDS CLI_0916 NC_009699.1 962623 963744 D identified by match to protein family HMM PF01041; pleiotropic regulatory protein 962623..963744 Clostridium botulinum F str. Langeland 5402015 YP_001390186.1 CDS CLI_0917 NC_009699.1 964706 964900 D identified by similarity to GB:ABL83831.1; hypothetical protein 964706..964900 Clostridium botulinum F str. Langeland 5402263 YP_001390187.1 CDS CLI_0918 NC_009699.1 965343 965855 D identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; match to protein family HMM TIGR02954; ECF subfamily RNA polymerase sigma factor 965343..965855 Clostridium botulinum F str. Langeland 5405505 YP_001390188.1 CDS CLI_0919 NC_009699.1 965860 967023 D identified by Glimmer3; hypothetical protein 965860..967023 Clostridium botulinum F str. Langeland 5405326 YP_001390189.1 CDS CLI_0920 NC_009699.1 967315 967869 R flavoredoxin complement(967315..967869) Clostridium botulinum F str. Langeland 5403159 YP_001390190.1 CDS CLI_0921 NC_009699.1 968192 969004 D identified by match to protein family HMM PF00561; non-heme haloperoxidase family protein 968192..969004 Clostridium botulinum F str. Langeland 5404850 YP_001390191.1 CDS cadD NC_009699.1 969306 969974 D identified by match to protein family HMM PF03596; cadmium resistance transporter CadD 969306..969974 Clostridium botulinum F str. Langeland 5403223 YP_001390192.1 CDS CLI_0923 NC_009699.1 970123 970539 D identified by match to protein family HMM PF04463; hypothetical protein 970123..970539 Clostridium botulinum F str. Langeland 5404339 YP_001390193.1 CDS CLI_0924 NC_009699.1 970666 970803 D identified by Glimmer3; hypothetical protein 970666..970803 Clostridium botulinum F str. Langeland 5403302 YP_001390194.1 CDS CLI_0925 NC_009699.1 970947 971363 R identified by similarity to GB:AAK79434.1; hypothetical protein complement(970947..971363) Clostridium botulinum F str. Langeland 5403702 YP_001390195.1 CDS CLI_0926 NC_009699.1 971502 971951 D identified by match to protein family HMM PF01037; HTH-type transcriptional regulator LrpC 971502..971951 Clostridium botulinum F str. Langeland 5403207 YP_001390196.1 CDS CLI_0927 NC_009699.1 972859 973251 D lipoprotein 972859..973251 Clostridium botulinum F str. Langeland 5405221 YP_001390197.1 CDS CLI_0928 NC_009699.1 973522 974316 R ABC transporter permease complement(973522..974316) Clostridium botulinum F str. Langeland 5403486 YP_001390198.1 CDS CLI_0929 NC_009699.1 974335 975252 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(974335..975252) Clostridium botulinum F str. Langeland 5402944 YP_001390199.1 CDS CLI_0930 NC_009699.1 975249 976370 R identified by match to protein family HMM PF01381; DNA-binding protein complement(975249..976370) Clostridium botulinum F str. Langeland 5402064 YP_001390200.1 CDS CLI_0931 NC_009699.1 977993 978568 D identified by match to protein family HMM PF00583; acetyltransferase 977993..978568 Clostridium botulinum F str. Langeland 5403534 YP_001390201.1 CDS CLI_0932 NC_009699.1 978734 979387 D identified by match to protein family HMM PF00805; pentapeptide repeat-containing protein 978734..979387 Clostridium botulinum F str. Langeland 5403589 YP_001390202.1 CDS CLI_0933 NC_009699.1 979512 980339 R identified by match to protein family HMM PF00376; MerR family transcriptional regulator complement(979512..980339) Clostridium botulinum F str. Langeland 5402734 YP_001390203.1 CDS CLI_0934 NC_009699.1 980451 981068 D identified by match to protein family HMM PF00583; acetyltransferase 980451..981068 Clostridium botulinum F str. Langeland 5403835 YP_001390204.1 CDS CLI_0935 NC_009699.1 981061 981216 D identified by Glimmer3; hypothetical protein 981061..981216 Clostridium botulinum F str. Langeland 5403747 YP_001390205.1 CDS CLI_0936 NC_009699.1 981274 981789 D identified by match to protein family HMM PF04229; hypothetical protein 981274..981789 Clostridium botulinum F str. Langeland 5403002 YP_001390206.1 CDS CLI_0937 NC_009699.1 981852 982376 D identified by match to protein family HMM PF00583; acetyltransferase 981852..982376 Clostridium botulinum F str. Langeland 5404548 YP_001390207.1 CDS CLI_0938 NC_009699.1 982940 983641 R identified by match to protein family HMM PF02678; hypothetical protein complement(982940..983641) Clostridium botulinum F str. Langeland 5404474 YP_001390208.1 CDS CLI_0939 NC_009699.1 983918 984226 R identified by match to protein family HMM PF01638; transcriptional regulator complement(983918..984226) Clostridium botulinum F str. Langeland 5403872 YP_001390209.1 CDS CLI_0940 NC_009699.1 984354 984983 D identified by match to protein family HMM PF00881; nitroreductase family protein 984354..984983 Clostridium botulinum F str. Langeland 5403797 YP_001390210.1 CDS CLI_0941 NC_009699.1 985270 986712 D lipase 985270..986712 Clostridium botulinum F str. Langeland 5401870 YP_001390211.1 CDS oxdD NC_009699.1 986873 988081 R identified by match to protein family HMM PF00190; match to protein family HMM PF07883; oxalate decarboxylase complement(986873..988081) Clostridium botulinum F str. Langeland 5402428 YP_001390212.1 CDS CLI_0943 NC_009699.1 988455 989033 R identified by match to protein family HMM PF03641; match to protein family HMM TIGR00730; decarboxylase family protein complement(988455..989033) Clostridium botulinum F str. Langeland 5404163 YP_001390213.1 CDS CLI_0944 NC_009699.1 989091 989546 R identified by match to protein family HMM PF04657; hypothetical protein complement(989091..989546) Clostridium botulinum F str. Langeland 5402890 YP_001390214.1 CDS CLI_0945 NC_009699.1 989660 990547 D identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 989660..990547 Clostridium botulinum F str. Langeland 5405579 YP_001390215.1 CDS CLI_0947 NC_009699.1 991468 991707 R identified by similarity to GB:AAS42270.1; hypothetical protein complement(991468..991707) Clostridium botulinum F str. Langeland 5402855 YP_001390216.1 CDS CLI_0948 NC_009699.1 991900 992367 R hypothetical protein complement(991900..992367) Clostridium botulinum F str. Langeland 5403253 YP_001390217.1 CDS CLI_0949 NC_009699.1 992372 992800 R hypothetical protein complement(992372..992800) Clostridium botulinum F str. Langeland 5404753 YP_001390218.1 CDS CLI_0950 NC_009699.1 992888 993577 D identified by match to protein family HMM PF00027; hypothetical protein 992888..993577 Clostridium botulinum F str. Langeland 5404550 YP_001390219.1 CDS CLI_0951 NC_009699.1 993637 994059 R hypothetical protein complement(993637..994059) Clostridium botulinum F str. Langeland 5402386 YP_001390220.1 CDS CLI_0952 NC_009699.1 994182 995114 D identified by match to protein family HMM PF08220; match to protein family HMM PF08279; hypothetical protein 994182..995114 Clostridium botulinum F str. Langeland 5402643 YP_001390221.1 CDS CLI_0953 NC_009699.1 995322 995792 R hypothetical protein complement(995322..995792) Clostridium botulinum F str. Langeland 5403661 YP_001390222.1 CDS CLI_0954 NC_009699.1 995792 996553 R hypothetical protein complement(995792..996553) Clostridium botulinum F str. Langeland 5404376 YP_001390223.1 CDS CLI_0955 NC_009699.1 996932 997078 D identified by similarity to GB:CAJ68657.1; hypothetical protein 996932..997078 Clostridium botulinum F str. Langeland 5402573 YP_001390224.1 CDS CLI_0956 NC_009699.1 997240 997740 R identified by match to protein family HMM PF01327; peptide deformylase complement(997240..997740) Clostridium botulinum F str. Langeland 5404906 YP_001390225.1 CDS CLI_0957 NC_009699.1 997973 999409 D identified by match to protein family HMM PF00155; match to protein family HMM PF00392; GntR family transcriptional regulator 997973..999409 Clostridium botulinum F str. Langeland 5403554 YP_001390226.1 CDS CLI_0958 NC_009699.1 999490 1000587 D identified by match to protein family HMM PF00165; AraC family transcriptional regulator 999490..1000587 Clostridium botulinum F str. Langeland 5404007 YP_001390227.1 CDS CLI_0959 NC_009699.1 1000886 1001404 R identified by match to protein family HMM PF00881; nitroreductase family protein complement(1000886..1001404) Clostridium botulinum F str. Langeland 5405095 YP_001390228.1 CDS CLI_0960 NC_009699.1 1001646 1002452 R identified by match to protein family HMM PF00037; (Fe-S)-binding protein complement(1001646..1002452) Clostridium botulinum F str. Langeland 5404424 YP_001390229.1 CDS CLI_0961 NC_009699.1 1003242 1004075 D identified by match to protein family HMM PF00874; match to protein family HMM PF03123; transcription antiterminator 1003242..1004075 Clostridium botulinum F str. Langeland 5403343 YP_001390230.1 CDS CLI_0962 NC_009699.1 1004200 1006077 D identified by match to protein family HMM PF00358; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00830; match to protein family HMM TIGR01995; PTS system beta-glucoside-specific transporter subunit IIABC 1004200..1006077 Clostridium botulinum F str. Langeland 5402880 YP_001390231.1 CDS CLI_0963 NC_009699.1 1006156 1007577 D identified by match to protein family HMM PF00232; glycosyl hydrolase family protein 1006156..1007577 Clostridium botulinum F str. Langeland 5404817 YP_001390232.1 CDS CLI_0964 NC_009699.1 1007705 1007911 D identified by Glimmer3; hypothetical protein 1007705..1007911 Clostridium botulinum F str. Langeland 5402159 YP_001390233.1 CDS mraY-1 NC_009699.1 1008099 1009052 R identified by match to protein family HMM PF00953; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(1008099..1009052) Clostridium botulinum F str. Langeland 5404565 YP_001390234.1 CDS CLI_0966 NC_009699.1 1009480 1010340 D identified by match to protein family HMM PF01381; DNA-binding protein 1009480..1010340 Clostridium botulinum F str. Langeland 5404120 YP_001390235.1 CDS CLI_0967 NC_009699.1 1010476 1011153 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 1010476..1011153 Clostridium botulinum F str. Langeland 5404101 YP_001390236.1 CDS CLI_0968 NC_009699.1 1011155 1012156 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase 1011155..1012156 Clostridium botulinum F str. Langeland 5404248 YP_001390237.1 CDS CLI_0969 NC_009699.1 1012271 1012954 D identified by match to protein family HMM PF00005; match to protein family HMM PF02463; ABC transporter ATP-binding protein 1012271..1012954 Clostridium botulinum F str. Langeland 5404709 YP_001390238.1 CDS CLI_0970 NC_009699.1 1012951 1015566 D identified by match to protein family HMM PF02687; ABC transporter permease 1012951..1015566 Clostridium botulinum F str. Langeland 5403758 YP_001390239.1 CDS CLI_0971 NC_009699.1 1016087 1016650 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1016087..1016650 Clostridium botulinum F str. Langeland 5403961 YP_001390240.1 CDS CLI_0972 NC_009699.1 1016672 1017763 D identified by match to protein family HMM PF04055; radical SAM domain-containing protein 1016672..1017763 Clostridium botulinum F str. Langeland 5404520 YP_001390241.1 CDS CLI_0973 NC_009699.1 1018011 1018466 R identified by Glimmer3; hypothetical protein complement(1018011..1018466) Clostridium botulinum F str. Langeland 5402802 YP_001390242.1 CDS CLI_0974 NC_009699.1 1018578 1019750 R identified by match to protein family HMM PF00376; MerR family transcriptional regulator complement(1018578..1019750) Clostridium botulinum F str. Langeland 5403718 YP_001390243.1 CDS CLI_0975 NC_009699.1 1020659 1021357 D identified by similarity to SP:P37449; match to protein family HMM PF00936; propanediol utilization protein PduB 1020659..1021357 Clostridium botulinum F str. Langeland 5403467 YP_001390244.1 CDS CLI_0976 NC_009699.1 1021647 1022993 D identified by similarity to GB:AAU16411.1; hypothetical protein 1021647..1022993 Clostridium botulinum F str. Langeland 5402755 YP_001390245.1 CDS CLI_0977 NC_009699.1 1023310 1024422 D identified by match to protein family HMM PF02275; match to protein family HMM PF03417; choloylglycine hydrolase 1023310..1024422 Clostridium botulinum F str. Langeland 5404571 YP_001390246.1 CDS CLI_0978 NC_009699.1 1024495 1025364 D identified by match to protein family HMM PF00165; match to protein family HMM PF06445; AraC family transcriptional regulator 1024495..1025364 Clostridium botulinum F str. Langeland 5403255 YP_001390247.1 CDS CLI_0979 NC_009699.1 1025503 1026735 R identified by match to protein family HMM PF04371; peptidyl-arginine deiminase complement(1025503..1026735) Clostridium botulinum F str. Langeland 5402340 YP_001390248.1 CDS CLI_0981 NC_009699.1 1027670 1028533 D identified by match to protein family HMM PF00892; match to protein family HMM PF06800; DMT family permease 1027670..1028533 Clostridium botulinum F str. Langeland 5402365 YP_001390249.1 CDS CLI_0982 NC_009699.1 1028891 1029478 D identified by match to protein family HMM PF04229; hypothetical protein 1028891..1029478 Clostridium botulinum F str. Langeland 5404832 YP_001390250.1 CDS CLI_0983 NC_009699.1 1029559 1029936 R identified by match to protein family HMM PF03734; ErfK/YbiS/YcfS/YnhG family protein complement(1029559..1029936) Clostridium botulinum F str. Langeland 5404685 YP_001390251.1 CDS CLI_0984 NC_009699.1 1030110 1030439 R identified by Glimmer3; hypothetical protein complement(1030110..1030439) Clostridium botulinum F str. Langeland 5405257 YP_001390252.1 CDS CLI_0985 NC_009699.1 1030679 1031011 R identified by Glimmer3; hypothetical protein complement(1030679..1031011) Clostridium botulinum F str. Langeland 5405590 YP_001390253.1 CDS CLI_0987 NC_009699.1 1031672 1032442 D identified by Glimmer3; hypothetical protein 1031672..1032442 Clostridium botulinum F str. Langeland 5403761 YP_001390254.1 CDS CLI_0988 NC_009699.1 1032980 1034587 D hypothetical protein 1032980..1034587 Clostridium botulinum F str. Langeland 5404807 YP_001390255.1 CDS CLI_0989 NC_009699.1 1034951 1037311 R identified by match to protein family HMM PF00005; match to protein family HMM PF02687; ABC transporter ATP-binding protein/permease complement(1034951..1037311) Clostridium botulinum F str. Langeland 5405485 YP_001390256.1 CDS CLI_0990 NC_009699.1 1037471 1038142 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 1037471..1038142 Clostridium botulinum F str. Langeland 5403030 YP_001390257.1 CDS CLI_0991 NC_009699.1 1038142 1039170 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 1038142..1039170 Clostridium botulinum F str. Langeland 5403426 YP_001390258.1 CDS CLI_0992 NC_009699.1 1039462 1040070 D identified by match to protein family HMM PF02632; BioY family protein 1039462..1040070 Clostridium botulinum F str. Langeland 5404905 YP_001390259.1 CDS CLI_0993 NC_009699.1 1040475 1042181 D identified by Glimmer3; hypothetical protein 1040475..1042181 Clostridium botulinum F str. Langeland 5405032 YP_001390260.1 CDS CLI_0994 NC_009699.1 1042524 1043069 D identified by match to protein family HMM PF00583; acetyltransferase 1042524..1043069 Clostridium botulinum F str. Langeland 5404712 YP_001390261.1 CDS CLI_0995 NC_009699.1 1043149 1044744 D identified by match to protein family HMM PF00717; LexA repressor 1043149..1044744 Clostridium botulinum F str. Langeland 5403133 YP_001390262.1 CDS cobU NC_009699.1 1045023 1045580 D catalyzes ATP-dependent phosphorylation of adenosylcobinamide to form adenosylcobinamide phosphate and the addition of guanosine monophosphate to adenosylcobinamide phosphate to form adenosylcobinamide-GDP; adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 1045023..1045580 Clostridium botulinum F str. Langeland 5404846 YP_001390263.1 CDS tipA NC_009699.1 1046202 1046966 R identified by match to protein family HMM PF00376; match to protein family HMM PF07739; transcriptional activator TipA complement(1046202..1046966) Clostridium botulinum F str. Langeland 5402085 YP_001390264.1 CDS CLI_0998 NC_009699.1 1047363 1047494 R identified by Glimmer3; hypothetical protein complement(1047363..1047494) Clostridium botulinum F str. Langeland 5402169 YP_001390265.1 CDS CLI_0999 NC_009699.1 1047486 1047611 D identified by Glimmer3; hypothetical protein 1047486..1047611 Clostridium botulinum F str. Langeland 5403625 YP_001390266.1 CDS cobQ NC_009699.1 1047672 1049153 D catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase 1047672..1049153 Clostridium botulinum F str. Langeland 5404806 YP_001390267.1 CDS cobD NC_009699.1 1049155 1050117 D CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group; cobalamin biosynthesis protein 1049155..1050117 Clostridium botulinum F str. Langeland 5405402 YP_001390268.1 CDS CLI_1002 NC_009699.1 1050336 1051424 D identified by match to protein family HMM PF00155; aminotransferase family protein 1050336..1051424 Clostridium botulinum F str. Langeland 5402054 YP_001390269.1 CDS cbiM NC_009699.1 1051609 1052328 D catalyzes the ATP-dependent transport of cobalt; cobalt transport protein CbiM 1051609..1052328 Clostridium botulinum F str. Langeland 5401947 YP_001390270.1 CDS cbiN NC_009699.1 1052332 1052631 D identified by match to protein family HMM PF02553; match to protein family HMM TIGR01165; cobalt transport protein 1052332..1052631 Clostridium botulinum F str. Langeland 5403419 YP_001390271.1 CDS cbiQ NC_009699.1 1052594 1053292 D cobalt ABC transporter permease CbiQ 1052594..1053292 Clostridium botulinum F str. Langeland 5402170 YP_001390272.1 CDS CLI_1006 NC_009699.1 1053740 1054387 D catalyzes the formation of siroheme from precorrin-2; precorrin-2 dehydrogenase 1053740..1054387 Clostridium botulinum F str. Langeland 5403639 YP_001390273.1 CDS hemC NC_009699.1 1054356 1055228 D transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 1054356..1055228 Clostridium botulinum F str. Langeland 5404180 YP_001390274.1 CDS cobA/hemD NC_009699.1 1055364 1056824 D identified by match to protein family HMM PF00590; match to protein family HMM PF02602; match to protein family HMM TIGR01469; uroporphyrinogen III synthase/methyltransferase 1055364..1056824 Clostridium botulinum F str. Langeland 5405355 YP_001390275.1 CDS CLI_1009 NC_009699.1 1056970 1057152 D hypothetical protein 1056970..1057152 Clostridium botulinum F str. Langeland 5403360 YP_001390276.1 CDS hemB NC_009699.1 1057414 1058388 D catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 1057414..1058388 Clostridium botulinum F str. Langeland 5403109 YP_001390277.1 CDS cobB NC_009699.1 1058622 1059944 D responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid; cobyrinic acid a,c-diamide synthase 1058622..1059944 Clostridium botulinum F str. Langeland 5405456 YP_001390278.1 CDS CLI_1012 NC_009699.1 1060098 1060793 D hypothetical protein 1060098..1060793 Clostridium botulinum F str. Langeland 5405261 YP_001390279.1 CDS CLI_1013 NC_009699.1 1060855 1061439 D identified by match to protein family HMM PF00132; hexapeptide repeat-containing transferase 1060855..1061439 Clostridium botulinum F str. Langeland 5403259 YP_001390280.1 CDS cbiC NC_009699.1 1061566 1062192 D catalyzes the interconversion of precorrin-8X and cobyrinic acid; precorrin-8X methylmutase 1061566..1062192 Clostridium botulinum F str. Langeland 5403124 YP_001390281.1 CDS CLI_1015 NC_009699.1 1062221 1062961 D identified by similarity to GB:BAE82864.1; hypothetical protein 1062221..1062961 Clostridium botulinum F str. Langeland 5402862 YP_001390282.1 CDS CLI_1016 NC_009699.1 1063056 1064330 D identified by match to protein family HMM PF00376; transcriptional regulator, MerR family protein 1063056..1064330 Clostridium botulinum F str. Langeland 5405286 YP_001390283.1 CDS CLI_1017 NC_009699.1 1064423 1064896 D identified by similarity to GB:AAK81102.1; hypothetical protein 1064423..1064896 Clostridium botulinum F str. Langeland 5404530 YP_001390284.1 CDS CLI_1018 NC_009699.1 1064923 1065348 D identified by match to protein family HMM PF00583; acetyltransferase 1064923..1065348 Clostridium botulinum F str. Langeland 5402719 YP_001390285.1 CDS CLI_1019 NC_009699.1 1065568 1065819 D identified by Glimmer3; hypothetical protein 1065568..1065819 Clostridium botulinum F str. Langeland 5403910 YP_001390286.1 CDS CLI_1020 NC_009699.1 1065847 1066368 D identified by match to protein family HMM PF00881; nitroreductase family protein 1065847..1066368 Clostridium botulinum F str. Langeland 5403842 YP_001390287.1 CDS CLI_1021 NC_009699.1 1066438 1066731 D identified by Glimmer3; hypothetical protein 1066438..1066731 Clostridium botulinum F str. Langeland 5403161 YP_001390288.1 CDS CLI_1022 NC_009699.1 1066824 1067417 D identified by match to protein family HMM PF04229; hypothetical protein 1066824..1067417 Clostridium botulinum F str. Langeland 5402957 YP_001390289.1 CDS cbiD NC_009699.1 1067430 1068509 D Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A; cobalt-precorrin-6A synthase 1067430..1068509 Clostridium botulinum F str. Langeland 5405078 YP_001390290.1 CDS cbiE NC_009699.1 1068710 1069381 D identified by match to protein family HMM PF00590; match to protein family HMM TIGR02467; precorrin-6y C5,15-methyltransferase subunit CbiE 1068710..1069381 Clostridium botulinum F str. Langeland 5402921 YP_001390291.1 CDS CLI_1025 NC_009699.1 1069566 1069946 D identified by similarity to GB:ABK62228.1; hypothetical protein 1069566..1069946 Clostridium botulinum F str. Langeland 5403412 YP_001390292.1 CDS cbiT NC_009699.1 1070010 1070588 D identified by match to protein family HMM PF03602; match to protein family HMM TIGR02469; precorrin-6Y C5,15-methyltransferase subunit CbiT 1070010..1070588 Clostridium botulinum F str. Langeland 5402137 YP_001390293.1 CDS CLI_1027 NC_009699.1 1070585 1071016 D hypothetical protein 1070585..1071016 Clostridium botulinum F str. Langeland 5402264 YP_001390294.1 CDS CLI_1028 NC_009699.1 1071052 1071603 D hypothetical protein 1071052..1071603 Clostridium botulinum F str. Langeland 5404060 YP_001390295.1 CDS CLI_1029 NC_009699.1 1071767 1071931 R identified by Glimmer3; hypothetical protein complement(1071767..1071931) Clostridium botulinum F str. Langeland 5402251 YP_001390296.1 CDS CLI_1030 NC_009699.1 1072103 1072294 D identified by Glimmer3; hypothetical protein 1072103..1072294 Clostridium botulinum F str. Langeland 5402491 YP_001390297.1 CDS CLI_1031 NC_009699.1 1072452 1072904 D hypothetical protein 1072452..1072904 Clostridium botulinum F str. Langeland 5402841 YP_001390298.1 CDS CLI_1032 NC_009699.1 1072964 1073305 D hypothetical protein 1072964..1073305 Clostridium botulinum F str. Langeland 5402546 YP_001390299.1 CDS CLI_1033 NC_009699.1 1073373 1073921 D identified by match to protein family HMM PF00583; acetyltransferase 1073373..1073921 Clostridium botulinum F str. Langeland 5404441 YP_001390300.1 CDS CLI_1034 NC_009699.1 1073971 1074363 D identified by Glimmer3; hypothetical protein 1073971..1074363 Clostridium botulinum F str. Langeland 5402268 YP_001390301.1 CDS cobI NC_009699.1 1074454 1075170 D catalyzes the formation of precorrin-3A from precorrin-2; cobalt-precorrin-2 C(20)-methyltransferase 1074454..1075170 Clostridium botulinum F str. Langeland 5401914 YP_001390302.1 CDS cobM NC_009699.1 1075458 1076216 D identified by match to protein family HMM PF00590; match to protein family HMM TIGR01465; precorrin-4 C(11)-methyltransferase 1075458..1076216 Clostridium botulinum F str. Langeland 5404843 YP_001390303.1 CDS cbiG NC_009699.1 1076194 1077303 D identified by match to protein family HMM PF01890; cobalamin biosynthesis protein CbiG 1076194..1077303 Clostridium botulinum F str. Langeland 5403986 YP_001390304.1 CDS cobJ NC_009699.1 1077581 1078312 D identified by match to protein family HMM PF00590; match to protein family HMM TIGR01466; precorrin-3B C(17)-methyltransferase 1077581..1078312 Clostridium botulinum F str. Langeland 5403311 YP_001390305.1 CDS cobK NC_009699.1 1078489 1079256 D CobK/CbiJ; there are 2 pathways for cobalamin (vitamin B12) production, one aerobic (ex. P. denitrificans), the other anaerobic (ex. S. typhimurium); the CobK/CbiJ perform similar reactions in both; the anaerobic pathway includes the use of a chelated cobalt ion in order for ring contraction to occur; CobK thus converts precorrin 6 into dihydro-precorrin 6 while CbiJ converts cobalt-precorrin 6 into cobalt-deihydro-precorrin 6; cobalt-precorrin-6x reductase 1078489..1079256 Clostridium botulinum F str. Langeland 5402279 YP_001390306.1 CDS CLI_1040 NC_009699.1 1079336 1079824 D hypothetical protein 1079336..1079824 Clostridium botulinum F str. Langeland 5404856 YP_001390307.1 CDS CLI_1041 NC_009699.1 1079847 1079966 D identified by Glimmer3; hypothetical protein 1079847..1079966 Clostridium botulinum F str. Langeland 5405235 YP_001390308.1 CDS cbiK NC_009699.1 1080137 1080919 D identified by match to protein family HMM PF01903; match to protein family HMM PF06180; anaerobic sirohydrochlorin cobaltochelatase 1080137..1080919 Clostridium botulinum F str. Langeland 5404221 YP_001390309.1 CDS CLI_1043 NC_009699.1 1080932 1081771 D identified by match to protein family HMM PF00288; kinase 1080932..1081771 Clostridium botulinum F str. Langeland 5405169 YP_001390310.1 CDS cobO NC_009699.1 1081921 1082442 D catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide; cob(I)yrinic acid a,c-diamide adenosyltransferase 1081921..1082442 Clostridium botulinum F str. Langeland 5402685 YP_001390311.1 CDS CLI_1045 NC_009699.1 1082695 1083384 D identified by match to protein family HMM PF00027; match to protein family HMM PF00325; Crp/FNR family transcriptional regulator 1082695..1083384 Clostridium botulinum F str. Langeland 5403599 YP_001390312.1 CDS CLI_1046 NC_009699.1 1083474 1084238 D identified by match to protein family HMM PF01226; formate/nitrite transporter family protein 1083474..1084238 Clostridium botulinum F str. Langeland 5402527 YP_001390313.1 CDS asrA NC_009699.1 1084255 1085286 D identified by match to protein family HMM PF00037; match to protein family HMM TIGR02910; anaerobic sulfite reductase subunit A 1084255..1085286 Clostridium botulinum F str. Langeland 5403903 YP_001390314.1 CDS asrB NC_009699.1 1085273 1086070 D with AsrAC catalyzes the reduction of sulfite to hydrogen sulfide; anaerobic sulfite reductase subunit B 1085273..1086070 Clostridium botulinum F str. Langeland 5402371 YP_001390315.1 CDS arsC NC_009699.1 1086083 1087048 D identified by match to protein family HMM PF00037; match to protein family HMM PF01077; match to protein family HMM PF03460; match to protein family HMM TIGR02912; anaerobic sulfite reductase subunit C 1086083..1087048 Clostridium botulinum F str. Langeland 5403799 YP_001390316.1 CDS CLI_1050 NC_009699.1 1087398 1088420 D identified by match to protein family HMM PF00994; molybdopterin biosynthesis protein 1087398..1088420 Clostridium botulinum F str. Langeland 5402737 YP_001390317.1 CDS CLI_1051 NC_009699.1 1088566 1088913 R identified by Glimmer3; hypothetical protein complement(1088566..1088913) Clostridium botulinum F str. Langeland 5405093 YP_001390318.1 CDS CLI_1052 NC_009699.1 1089803 1090822 D hypothetical protein 1089803..1090822 Clostridium botulinum F str. Langeland 5404315 YP_001390319.1 CDS CLI_1053 NC_009699.1 1090843 1091730 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1090843..1091730 Clostridium botulinum F str. Langeland 5405461 YP_001390320.1 CDS CLI_1054 NC_009699.1 1091734 1092510 D hypothetical protein 1091734..1092510 Clostridium botulinum F str. Langeland 5401850 YP_001390321.1 CDS CLI_1055 NC_009699.1 1093159 1093881 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 1093159..1093881 Clostridium botulinum F str. Langeland 5403681 YP_001390322.1 CDS CLI_1056 NC_009699.1 1093871 1095292 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase 1093871..1095292 Clostridium botulinum F str. Langeland 5402508 YP_001390323.1 CDS CLI_1057 NC_009699.1 1095615 1095728 D identified by Glimmer3; hypothetical protein 1095615..1095728 Clostridium botulinum F str. Langeland 5405331 YP_001390324.1 CDS CLI_1058 NC_009699.1 1095912 1096682 R identified by match to protein family HMM PF00005; iron ABC transporter ATP-binding protein complement(1095912..1096682) Clostridium botulinum F str. Langeland 5402735 YP_001390325.1 CDS CLI_1059 NC_009699.1 1096683 1097750 R identified by match to protein family HMM PF00950; match to protein family HMM PF01032; iron ABC transporter permease complement(1096683..1097750) Clostridium botulinum F str. Langeland 5403007 YP_001390326.1 CDS CLI_1060 NC_009699.1 1097763 1098785 R identified by match to protein family HMM PF01497; iron chelate uptake ABC transporter solute-binding protein complement(1097763..1098785) Clostridium botulinum F str. Langeland 5404109 YP_001390327.1 CDS dhaKL NC_009699.1 1099343 1101103 R in some organisms the DhaK and DhaL subunits are encoded by separate genes; in others they are fused; functions along with DhaM to phosphorylate dihydroxyacetone; dihydroxyacetone kinase complement(1099343..1101103) Clostridium botulinum F str. Langeland 5403564 YP_001390328.1 CDS gldA NC_009699.1 1101114 1102244 R forms dimers and octamers; involved in conversion of glycerol to dihydroxy-acetone; glycerol dehydrogenase complement(1101114..1102244) Clostridium botulinum F str. Langeland 5404722 YP_001390329.1 CDS CLI_1063 NC_009699.1 1102561 1103598 R identified by match to protein family HMM PF00165; AraC family transcriptional regulator complement(1102561..1103598) Clostridium botulinum F str. Langeland 5402804 YP_001390330.1 CDS CLI_1064 NC_009699.1 1103940 1104404 D identified by match to protein family HMM PF00583; acetyltransferase 1103940..1104404 Clostridium botulinum F str. Langeland 5401915 YP_001390331.1 CDS CLI_1065 NC_009699.1 1104506 1104949 D identified by match to protein family HMM PF00583; acetyltransferase 1104506..1104949 Clostridium botulinum F str. Langeland 5402920 YP_001390332.1 CDS CLI_1066 NC_009699.1 1105102 1105695 D identified by match to protein family HMM PF07081; hypothetical protein 1105102..1105695 Clostridium botulinum F str. Langeland 5405452 YP_001390333.1 CDS CLI_1067 NC_009699.1 1105759 1105959 D identified by Glimmer3; hypothetical protein 1105759..1105959 Clostridium botulinum F str. Langeland 5404247 YP_001390334.1 CDS CLI_1068 NC_009699.1 1106081 1106926 D identified by match to protein family HMM PF00248; aldo/keto reductase 1106081..1106926 Clostridium botulinum F str. Langeland 5405380 YP_001390335.1 CDS CLI_1069 NC_009699.1 1107027 1107350 D identified by match to protein family HMM PF04993; TfoX domain-containing protein 1107027..1107350 Clostridium botulinum F str. Langeland 5404796 YP_001390336.1 CDS CLI_1070 NC_009699.1 1107396 1108250 D identified by match to protein family HMM PF00583; acetyltransferase 1107396..1108250 Clostridium botulinum F str. Langeland 5405521 YP_001390337.1 CDS CLI_1071 NC_009699.1 1108475 1108966 D hypothetical protein 1108475..1108966 Clostridium botulinum F str. Langeland 5405193 YP_001390338.1 CDS add NC_009699.1 1109648 1110655 R catalyzes the formation of inosine from adenosine; adenosine deaminase complement(1109648..1110655) Clostridium botulinum F str. Langeland 5404112 YP_001390339.1 CDS CLI_1073 NC_009699.1 1111550 1113718 D identified by match to protein family HMM TIGR03061; match to protein family HMM TIGR03062; phage infection protein 1111550..1113718 Clostridium botulinum F str. Langeland 5404055 YP_001390340.1 CDS CLI_1074 NC_009699.1 1113745 1115904 D identified by match to protein family HMM PF01061; match to protein family HMM TIGR03061; match to protein family HMM TIGR03062; phage infection protein 1113745..1115904 Clostridium botulinum F str. Langeland 5404279 YP_001390341.1 CDS CLI_1075 NC_009699.1 1116378 1116680 R hypothetical protein complement(1116378..1116680) Clostridium botulinum F str. Langeland 5405436 YP_001390342.1 CDS CLI_1076 NC_009699.1 1116886 1117641 D hypothetical protein 1116886..1117641 Clostridium botulinum F str. Langeland 5405234 YP_001390343.1 CDS recQ NC_009699.1 1117909 1120038 D identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00570; match to protein family HMM TIGR00614; match to protein family HMM TIGR01389; ATP-dependent DNA helicase RecQ 1117909..1120038 Clostridium botulinum F str. Langeland 5402253 YP_001390344.1 CDS CLI_1078 NC_009699.1 1120210 1120641 D identified by match to protein family HMM PF02915; ferritin-like diiron domain-containing protein 1120210..1120641 Clostridium botulinum F str. Langeland 5403389 YP_001390345.1 CDS CLI_1079 NC_009699.1 1120923 1121468 R identified by match to protein family HMM PF00149; match to protein family HMM TIGR00040; phosphodiesterase complement(1120923..1121468) Clostridium botulinum F str. Langeland 5402531 YP_001390346.1 CDS CLI_1080 NC_009699.1 1122105 1122488 D identified by match to protein family HMM PF00072; response regulator 1122105..1122488 Clostridium botulinum F str. Langeland 5402991 YP_001390347.1 CDS CLI_1081 NC_009699.1 1122603 1125077 D identified by match to protein family HMM PF07656; hypothetical protein 1122603..1125077 Clostridium botulinum F str. Langeland 5403513 YP_001390348.1 CDS CLI_1082 NC_009699.1 1125525 1125740 D identified by Glimmer3; hypothetical protein 1125525..1125740 Clostridium botulinum F str. Langeland 5403448 YP_001390349.1 CDS CLI_1083 NC_009699.1 1125742 1126560 D hypothetical protein 1125742..1126560 Clostridium botulinum F str. Langeland 5402992 YP_001390350.1 CDS CLI_1084 NC_009699.1 1126560 1127153 D identified by match to protein family HMM PF04055; anaerobic ribonucleoside-triphosphate reductase activating protein 1126560..1127153 Clostridium botulinum F str. Langeland 5403555 YP_001390351.1 CDS CLI_1085 NC_009699.1 1127167 1128840 D identified by match to protein family HMM PF00004; ATPase AAA 1127167..1128840 Clostridium botulinum F str. Langeland 5402609 YP_001390352.1 CDS CLI_1086 NC_009699.1 1128855 1129625 D identified by Glimmer3; hypothetical protein 1128855..1129625 Clostridium botulinum F str. Langeland 5404828 YP_001390353.1 CDS lctP NC_009699.1 1130103 1131626 D identified by match to protein family HMM PF02652; match to protein family HMM PF03553; match to protein family HMM TIGR00795; L-lactate permease 1130103..1131626 Clostridium botulinum F str. Langeland 5405658 YP_001390354.1 CDS CLI_1088 NC_009699.1 1131655 1132929 D hypothetical protein 1131655..1132929 Clostridium botulinum F str. Langeland 5402911 YP_001390355.1 CDS CLI_1089 NC_009699.1 1132972 1133760 D identified by match to protein family HMM PF01012; electron transfer flavoprotein subunit beta/FixA family protein 1132972..1133760 Clostridium botulinum F str. Langeland 5404152 YP_001390356.1 CDS CLI_1090 NC_009699.1 1133792 1134994 D identified by match to protein family HMM PF00766; match to protein family HMM PF01012; electron transfer flavoprotein subunit alpha/FixB family protein 1133792..1134994 Clostridium botulinum F str. Langeland 5403878 YP_001390357.1 CDS CLI_1091 NC_009699.1 1135055 1136452 D identified by match to protein family HMM PF01565; match to protein family HMM PF02913; glycolate oxidase 1135055..1136452 Clostridium botulinum F str. Langeland 5402462 YP_001390358.1 CDS CLI_1092 NC_009699.1 1136721 1136840 D identified by similarity to GB:CAK20204.1; hypothetical protein 1136721..1136840 Clostridium botulinum F str. Langeland 5405011 YP_001390359.1 CDS CLI_1093 NC_009699.1 1136967 1137875 D lipoprotein 1136967..1137875 Clostridium botulinum F str. Langeland 5405378 YP_001390360.1 CDS CLI_1094 NC_009699.1 1138071 1138541 D identified by match to protein family HMM PF01047; MarR family transcriptional regulator 1138071..1138541 Clostridium botulinum F str. Langeland 5402242 YP_001390361.1 CDS CLI_1095 NC_009699.1 1138543 1139088 D identified by match to protein family HMM PF04199; cyclase 1138543..1139088 Clostridium botulinum F str. Langeland 5401874 YP_001390362.1 CDS CLI_1096 NC_009699.1 1139239 1140423 R catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase complement(1139239..1140423) Clostridium botulinum F str. Langeland 5404564 YP_001390363.1 CDS CLI_1097 NC_009699.1 1141372 1141950 R identified by match to protein family HMM PF04199; cyclase complement(1141372..1141950) Clostridium botulinum F str. Langeland 5404670 YP_001390364.1 CDS CLI_1098 NC_009699.1 1142109 1142633 D identified by match to protein family HMM PF01047; MarR family transcriptional regulator 1142109..1142633 Clostridium botulinum F str. Langeland 5405444 YP_001390365.1 CDS CLI_1099 NC_009699.1 1142936 1143757 D identified by match to protein family HMM PF00376; match to protein family HMM PF06445; MerR family transcriptional regulator 1142936..1143757 Clostridium botulinum F str. Langeland 5402915 YP_001390366.1 CDS CLI_1100 NC_009699.1 1143972 1144670 D identified by match to protein family HMM PF03483; B3/4 domain-containing protein 1143972..1144670 Clostridium botulinum F str. Langeland 5402432 YP_001390367.1 CDS aspC NC_009699.1 1144946 1146235 R catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase complement(1144946..1146235) Clostridium botulinum F str. Langeland 5402152 YP_001390368.1 CDS CLI_1102 NC_009699.1 1147444 1147944 D identified by match to protein family HMM PF06695; transporter 1147444..1147944 Clostridium botulinum F str. Langeland 5404231 YP_001390369.1 CDS CLI_1103 NC_009699.1 1148122 1148238 R identified by Glimmer3; hypothetical protein complement(1148122..1148238) Clostridium botulinum F str. Langeland 5404646 YP_001390370.1 CDS CLI_1104 NC_009699.1 1148656 1149213 D hypothetical protein 1148656..1149213 Clostridium botulinum F str. Langeland 5405336 YP_001390371.1 CDS CLI_1105 NC_009699.1 1149217 1149780 D identified by match to protein family HMM PF01066; CDP-alcohol phosphatidyltransferase 1149217..1149780 Clostridium botulinum F str. Langeland 5405460 YP_001390372.1 CDS CLI_1106 NC_009699.1 1149964 1150626 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1149964..1150626 Clostridium botulinum F str. Langeland 5405279 YP_001390373.1 CDS CLI_1107 NC_009699.1 1150642 1151130 D hypothetical protein 1150642..1151130 Clostridium botulinum F str. Langeland 5402418 YP_001390374.1 CDS CLI_1108 NC_009699.1 1151241 1151930 R identified by match to protein family HMM PF00702; match to protein family HMM TIGR01549; match to protein family HMM TIGR02254; HAD family hydrolase complement(1151241..1151930) Clostridium botulinum F str. Langeland 5405417 YP_001390375.1 CDS CLI_1109 NC_009699.1 1152243 1152932 D identified by match to protein family HMM PF00027; cyclic nucleotide-binding domain-containing protein 1152243..1152932 Clostridium botulinum F str. Langeland 5404310 YP_001390376.1 CDS CLI_1110 NC_009699.1 1153242 1153826 R identified by match to protein family HMM PF01965; DJ-1/PfpI family protein complement(1153242..1153826) Clostridium botulinum F str. Langeland 5402206 YP_001390377.1 CDS CLI_1111 NC_009699.1 1153982 1154875 D identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 1153982..1154875 Clostridium botulinum F str. Langeland 5404457 YP_001390378.1 CDS CLI_1112 NC_009699.1 1154931 1155716 D identified by match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937; sigma-70 family RNA polymerase sigma factor 1154931..1155716 Clostridium botulinum F str. Langeland 5404668 YP_001390379.1 CDS CLI_1113 NC_009699.1 1155809 1156255 D identified by similarity to GB:ABM29253.1; hypothetical protein 1155809..1156255 Clostridium botulinum F str. Langeland 5405332 YP_001390380.1 CDS CLI_1114 NC_009699.1 1156412 1157170 D hypothetical protein 1156412..1157170 Clostridium botulinum F str. Langeland 5404375 YP_001390381.1 CDS CLI_1115 NC_009699.1 1157806 1158015 D identified by match to protein family HMM PF04023; ferrous iron transport protein A 1157806..1158015 Clostridium botulinum F str. Langeland 5403399 YP_001390382.1 CDS CLI_1116 NC_009699.1 1158032 1158253 D identified by similarity to GB:ABG83432.1; match to protein family HMM PF04023; feoA family protein 1158032..1158253 Clostridium botulinum F str. Langeland 5404052 YP_001390383.1 CDS feoB-2 NC_009699.1 1158285 1160441 D identified by match to protein family HMM PF01926; match to protein family HMM PF02421; match to protein family HMM PF07664; match to protein family HMM PF07670; match to protein family HMM TIGR00231; match to protein family HMM TIGR00437; ferrous iron transport protein B 1158285..1160441 Clostridium botulinum F str. Langeland 5403600 YP_001390384.1 CDS CLI_1118 NC_009699.1 1160462 1160608 D identified by Glimmer3; hypothetical protein 1160462..1160608 Clostridium botulinum F str. Langeland 5402528 YP_001390385.1 CDS CLI_1119 NC_009699.1 1160824 1161513 D identified by similarity to GB:ABB15008.1; match to protein family HMM PF04239; hypothetical protein 1160824..1161513 Clostridium botulinum F str. Langeland 5403447 YP_001390386.1 CDS CLI_1120 NC_009699.1 1161675 1162112 R identified by match to protein family HMM PF00583; acetyltransferase complement(1161675..1162112) Clostridium botulinum F str. Langeland 5405109 YP_001390387.1 CDS CLI_1121 NC_009699.1 1162580 1163380 D identified by match to protein family HMM PF02557; D-alanyl-D-alanine carboxypeptidase 1162580..1163380 Clostridium botulinum F str. Langeland 5403768 YP_001390388.1 CDS tlp NC_009699.1 1163678 1163905 D identified by match to protein family HMM TIGR03090; small acid-soluble spore protein Tlp 1163678..1163905 Clostridium botulinum F str. Langeland 5402354 YP_001390389.1 CDS CLI_1123 NC_009699.1 1164001 1164123 R identified by Glimmer3; hypothetical protein complement(1164001..1164123) Clostridium botulinum F str. Langeland 5402803 YP_001390390.1 CDS CLI_1124 NC_009699.1 1164092 1164715 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(1164092..1164715) Clostridium botulinum F str. Langeland 5404775 YP_001390391.1 CDS CLI_1125 NC_009699.1 1164906 1166096 D identified by match to protein family HMM PF00557; match to protein family HMM PF01321; M24 family peptidase 1164906..1166096 Clostridium botulinum F str. Langeland 5402650 YP_001390392.1 CDS CLI_1126 NC_009699.1 1166433 1167119 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 1166433..1167119 Clostridium botulinum F str. Langeland 5401960 YP_001390393.1 CDS CLI_1127 NC_009699.1 1167120 1168475 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 1167120..1168475 Clostridium botulinum F str. Langeland 5401876 YP_001390394.1 CDS CLI_1128 NC_009699.1 1168579 1168713 D identified by Glimmer3; hypothetical protein 1168579..1168713 Clostridium botulinum F str. Langeland 5404351 YP_001390395.1 CDS CLI_1129 NC_009699.1 1169009 1170268 D identified by match to protein family HMM PF00067; cytochrome P450 1169009..1170268 Clostridium botulinum F str. Langeland 5402469 YP_001390396.1 CDS CLI_1130 NC_009699.1 1170408 1172216 R identified by match to protein family HMM PF00403; heavy metal-binding domain-containing protein complement(1170408..1172216) Clostridium botulinum F str. Langeland 5404640 YP_001390397.1 CDS CLI_1131 NC_009699.1 1172643 1172951 D identified by Glimmer3; hypothetical protein 1172643..1172951 Clostridium botulinum F str. Langeland 5402406 YP_001390398.1 CDS CLI_1132 NC_009699.1 1173362 1173598 D hypothetical protein 1173362..1173598 Clostridium botulinum F str. Langeland 5403167 YP_001390399.1 CDS CLI_1133 NC_009699.1 1173868 1174569 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 1173868..1174569 Clostridium botulinum F str. Langeland 5403590 YP_001390400.1 CDS CLI_1134 NC_009699.1 1174569 1175975 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 1174569..1175975 Clostridium botulinum F str. Langeland 5405071 YP_001390401.1 CDS CLI_1135 NC_009699.1 1176315 1177001 R hypothetical protein complement(1176315..1177001) Clostridium botulinum F str. Langeland 5404889 YP_001390402.1 CDS CLI_1136 NC_009699.1 1177237 1177995 R identified by match to protein family HMM PF00165; AraC family transcriptional regulator complement(1177237..1177995) Clostridium botulinum F str. Langeland 5405506 YP_001390403.1 CDS CLI_1137 NC_009699.1 1178241 1179194 D identified by match to protein family HMM PF01032; iron ABC transporter permease 1178241..1179194 Clostridium botulinum F str. Langeland 5402524 YP_001390404.1 CDS CLI_1138 NC_009699.1 1179184 1180134 D identified by match to protein family HMM PF01032; iron ABC transporter permease 1179184..1180134 Clostridium botulinum F str. Langeland 5402686 YP_001390405.1 CDS CLI_1139 NC_009699.1 1180131 1180886 D identified by match to protein family HMM PF00005; iron ABC transporter ATP-binding protein 1180131..1180886 Clostridium botulinum F str. Langeland 5403156 YP_001390406.1 CDS CLI_1140 NC_009699.1 1180960 1181904 D identified by match to protein family HMM PF01497; iron ABC transporter substrate-binding protein 1180960..1181904 Clostridium botulinum F str. Langeland 5404949 YP_001390407.1 CDS CLI_1141 NC_009699.1 1182106 1183107 D identified by match to protein family HMM PF00165; AraC family transcriptional regulator 1182106..1183107 Clostridium botulinum F str. Langeland 5402324 YP_001390408.1 CDS CLI_1142 NC_009699.1 1183079 1183225 D identified by Glimmer3; hypothetical protein 1183079..1183225 Clostridium botulinum F str. Langeland 5405271 YP_001390409.1 CDS CLI_1143 NC_009699.1 1183620 1185422 D identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease 1183620..1185422 Clostridium botulinum F str. Langeland 5402929 YP_001390410.1 CDS CLI_1144 NC_009699.1 1185424 1187139 D identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM PF02463; ABC transport ATP-binding protein/permease 1185424..1187139 Clostridium botulinum F str. Langeland 5405233 YP_001390411.1 CDS CLI_1145 NC_009699.1 1187346 1188719 R sensor histidine kinase complement(1187346..1188719) Clostridium botulinum F str. Langeland 5402031 YP_001390412.1 CDS CLI_1146 NC_009699.1 1188722 1189429 R identified by match to protein family HMM PF00072; match to protein family HMM PF04397; DNA-binding response regulator complement(1188722..1189429) Clostridium botulinum F str. Langeland 5402043 YP_001390413.1 CDS CLI_1147 NC_009699.1 1189517 1190386 R hypothetical protein complement(1189517..1190386) Clostridium botulinum F str. Langeland 5402061 YP_001390414.1 CDS CLI_1148 NC_009699.1 1190998 1194429 D identified by match to protein family HMM PF01345; match to protein family HMM TIGR01451; hypothetical protein 1190998..1194429 Clostridium botulinum F str. Langeland 5404578 YP_001390415.1 CDS CLI_1149 NC_009699.1 1194617 1196116 D identified by match to protein family HMM PF00041; match to protein family HMM PF00704; match to protein family HMM PF02839; extracellular exochitinase 1194617..1196116 Clostridium botulinum F str. Langeland 5405542 YP_001390416.1 CDS CLI_1150 NC_009699.1 1196442 1198484 D identified by match to protein family HMM PF03190; hypothetical protein 1196442..1198484 Clostridium botulinum F str. Langeland 5404473 YP_001390417.1 CDS CLI_1151 NC_009699.1 1198807 1199802 D identified by match to protein family HMM PF06081; hypothetical protein 1198807..1199802 Clostridium botulinum F str. Langeland 5402397 YP_001390418.1 CDS CLI_1152 NC_009699.1 1199967 1200551 D hypothetical protein 1199967..1200551 Clostridium botulinum F str. Langeland 5402278 YP_001390419.1 CDS CLI_1153 NC_009699.1 1200805 1201506 R identified by match to protein family HMM PF02517; CAAX amino terminal protease family protein complement(1200805..1201506) Clostridium botulinum F str. Langeland 5405502 YP_001390420.1 CDS CLI_1154 NC_009699.1 1201622 1202428 R identified by match to protein family HMM PF00753; metallo-beta-lactamase family protein complement(1201622..1202428) Clostridium botulinum F str. Langeland 5403478 YP_001390421.1 CDS CLI_1155 NC_009699.1 1202915 1204834 R identified by match to protein family HMM PF00005; transporter complement(1202915..1204834) Clostridium botulinum F str. Langeland 5405617 YP_001390422.1 CDS CLI_1156 NC_009699.1 1205472 1206686 D identified by match to protein family HMM PF07670; hypothetical protein 1205472..1206686 Clostridium botulinum F str. Langeland 5404146 YP_001390423.1 CDS CLI_1157 NC_009699.1 1207060 1207410 D identified by match to protein family HMM PF03960; ArsC family protein 1207060..1207410 Clostridium botulinum F str. Langeland 5404432 YP_001390424.1 CDS CLI_1158 NC_009699.1 1207642 1208535 D radical SAM domain-containing protein 1207642..1208535 Clostridium botulinum F str. Langeland 5402825 YP_001390425.1 CDS CLI_1159 NC_009699.1 1208744 1210162 D identified by match to protein family HMM PF01266; match to protein family HMM PF04324; FAD-dependent oxidoreductase 1208744..1210162 Clostridium botulinum F str. Langeland 5402220 YP_001390426.1 CDS CLI_1160 NC_009699.1 1210219 1211475 D identified by match to protein family HMM PF00070; match to protein family HMM PF00890; match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase 1210219..1211475 Clostridium botulinum F str. Langeland 5402631 YP_001390427.1 CDS CLI_1161 NC_009699.1 1211478 1211846 D identified by match to protein family HMM PF07892; hypothetical protein 1211478..1211846 Clostridium botulinum F str. Langeland 5403483 YP_001390428.1 CDS glpT NC_009699.1 1211935 1213272 D identified by match to protein family HMM PF07690; match to protein family HMM TIGR00712; match to protein family HMM TIGR00881; glycerol-3-phosphate transporter 1211935..1213272 Clostridium botulinum F str. Langeland 5402293 YP_001390429.1 CDS argS NC_009699.1 1213855 1215546 D catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 1213855..1215546 Clostridium botulinum F str. Langeland 5404297 YP_001390430.1 CDS CLI_1164 NC_009699.1 1216087 1216200 D identified by Glimmer3; hypothetical protein 1216087..1216200 Clostridium botulinum F str. Langeland 5402689 YP_001390431.1 CDS CLI_1165 NC_009699.1 1216190 1217320 D associated with arginine deiminase pathway genes; probably functions in arginine catabolism; transaminase 1216190..1217320 Clostridium botulinum F str. Langeland 5404651 YP_001390432.1 CDS CLI_1166 NC_009699.1 1217600 1217980 D identified by match to protein family HMM PF00571; hypothetical protein 1217600..1217980 Clostridium botulinum F str. Langeland 5405273 YP_001390433.1 CDS CLI_1167 NC_009699.1 1218189 1218347 R identified by Glimmer3; hypothetical protein complement(1218189..1218347) Clostridium botulinum F str. Langeland 5403803 YP_001390434.1 CDS feoB-3 NC_009699.1 1218373 1220136 R identified by match to protein family HMM PF01926; match to protein family HMM PF02421; match to protein family HMM PF07664; match to protein family HMM PF07670; match to protein family HMM TIGR00231; match to protein family HMM TIGR00437; match to protein family HMM TIGR00650; ferrous iron transport protein B complement(1218373..1220136) Clostridium botulinum F str. Langeland 5405152 YP_001390435.1 CDS feoA-2 NC_009699.1 1220151 1220372 R identified by match to protein family HMM PF04023; ferrous ion transport protein A complement(1220151..1220372) Clostridium botulinum F str. Langeland 5405665 YP_001390436.1 CDS CLI_1170 NC_009699.1 1220698 1221093 D identified by match to protein family HMM PF07238; hypothetical protein 1220698..1221093 Clostridium botulinum F str. Langeland 5403213 YP_001390437.1 CDS CLI_1171 NC_009699.1 1221306 1222031 D identified by match to protein family HMM TIGR01488; match to protein family HMM TIGR01490; haloacid dehalogenase 1221306..1222031 Clostridium botulinum F str. Langeland 5404855 YP_001390438.1 CDS CLI_1172 NC_009699.1 1222940 1224523 D identified by match to protein family HMM PF02839; glycosyl hydrolase 1222940..1224523 Clostridium botulinum F str. Langeland 5404282 YP_001390439.1 CDS CLI_1173 NC_009699.1 1224935 1225402 D identified by match to protein family HMM PF00583; acetyltransferase 1224935..1225402 Clostridium botulinum F str. Langeland 5402445 YP_001390440.1 CDS CLI_1174 NC_009699.1 1225680 1226636 D identified by match to protein family HMM PF00005; methionine ABC transporter ATP-binding protein 1225680..1226636 Clostridium botulinum F str. Langeland 5404066 YP_001390441.1 CDS CLI_1175 NC_009699.1 1226638 1227279 D identified by match to protein family HMM PF00528; methionine ABC transporter permease 1226638..1227279 Clostridium botulinum F str. Langeland 5402901 YP_001390442.1 CDS CLI_1176 NC_009699.1 1227334 1228146 D identified by match to protein family HMM PF03180; NLPA family lipoprotein 1227334..1228146 Clostridium botulinum F str. Langeland 5405260 YP_001390443.1 CDS CLI_1177 NC_009699.1 1228334 1229146 D identified by match to protein family HMM PF03180; NLPA family lipoprotein 1228334..1229146 Clostridium botulinum F str. Langeland 5403783 YP_001390444.1 CDS CLI_1178 NC_009699.1 1229374 1230540 D identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891; amidohydrolase 1229374..1230540 Clostridium botulinum F str. Langeland 5404323 YP_001390445.1 CDS CLI_1179 NC_009699.1 1231241 1231870 D hypothetical protein 1231241..1231870 Clostridium botulinum F str. Langeland 5402600 YP_001390446.1 CDS CLI_1180 NC_009699.1 1232376 1233068 D identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator 1232376..1233068 Clostridium botulinum F str. Langeland 5403062 YP_001390447.1 CDS CLI_1181 NC_009699.1 1233313 1234176 D identified by match to protein family HMM PF02588; hypothetical protein 1233313..1234176 Clostridium botulinum F str. Langeland 5404317 YP_001390448.1 CDS CLI_1182 NC_009699.1 1234384 1234596 D hypothetical protein 1234384..1234596 Clostridium botulinum F str. Langeland 5404049 YP_001390449.1 CDS gltX NC_009699.1 1234814 1236271 R Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase complement(1234814..1236271) Clostridium botulinum F str. Langeland 5405249 YP_001390450.1 CDS gap-2 NC_009699.1 1236696 1237712 D identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534; glyceraldehyde-3-phosphate dehydrogenase, type I 1236696..1237712 Clostridium botulinum F str. Langeland 5401862 YP_001390451.1 CDS CLI_1185 NC_009699.1 1237957 1239465 R identified by match to protein family HMM PF00753; match to protein family HMM PF07521; metallo-beta-lactamase family protein complement(1237957..1239465) Clostridium botulinum F str. Langeland 5402699 YP_001390452.1 CDS CLI_1186 NC_009699.1 1239961 1240110 D identified by Glimmer3; hypothetical protein 1239961..1240110 Clostridium botulinum F str. Langeland 5404880 YP_001390453.1 CDS CLI_1187 NC_009699.1 1240253 1240897 D identified by match to protein family HMM PF01966; HD domain-containing protein 1240253..1240897 Clostridium botulinum F str. Langeland 5403372 YP_001390454.1 CDS CLI_1188 NC_009699.1 1240953 1242323 D identified by match to protein family HMM PF00171; aldehyde dehydrogenase 1240953..1242323 Clostridium botulinum F str. Langeland 5404271 YP_001390455.1 CDS CLI_1189 NC_009699.1 1242406 1243803 R identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835; sodium:alanine symporter family protein complement(1242406..1243803) Clostridium botulinum F str. Langeland 5404223 YP_001390456.1 CDS CLI_1190 NC_009699.1 1244400 1245776 R identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835; sodium:alanine symporter family protein complement(1244400..1245776) Clostridium botulinum F str. Langeland 5403487 YP_001390457.1 CDS CLI_1191 NC_009699.1 1246215 1246652 D identified by match to protein family HMM PF01047; MarR family transcriptional regulator 1246215..1246652 Clostridium botulinum F str. Langeland 5404488 YP_001390458.1 CDS CLI_1192 NC_009699.1 1246670 1248037 D identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein 1246670..1248037 Clostridium botulinum F str. Langeland 5404313 YP_001390459.1 CDS CLI_1193 NC_009699.1 1248456 1249001 D hypothetical protein 1248456..1249001 Clostridium botulinum F str. Langeland 5402000 YP_001390460.1 CDS CLI_1194 NC_009699.1 1249100 1250077 D hypothetical protein 1249100..1250077 Clostridium botulinum F str. Langeland 5403997 YP_001390461.1 CDS CLI_1195 NC_009699.1 1250959 1252197 D ABC transporter substrate-binding protein 1250959..1252197 Clostridium botulinum F str. Langeland 5402034 YP_001390462.1 CDS CLI_1196 NC_009699.1 1252199 1253062 D identified by match to protein family HMM PF00528; ABC transporter permease 1252199..1253062 Clostridium botulinum F str. Langeland 5405325 YP_001390463.1 CDS CLI_1197 NC_009699.1 1253088 1253894 D identified by match to protein family HMM PF00528; ABC transporter permease 1253088..1253894 Clostridium botulinum F str. Langeland 5402879 YP_001390464.1 CDS CLI_1198 NC_009699.1 1253906 1254925 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1253906..1254925 Clostridium botulinum F str. Langeland 5403309 YP_001390465.1 CDS CLI_1199 NC_009699.1 1255227 1256186 D hypothetical protein 1255227..1256186 Clostridium botulinum F str. Langeland 5405525 YP_001390466.1 CDS CLI_1200 NC_009699.1 1256290 1256841 D identified by match to protein family HMM PF00583; acetyltransferase 1256290..1256841 Clostridium botulinum F str. Langeland 5405123 YP_001390467.1 CDS CLI_1201 NC_009699.1 1256851 1257186 D hypothetical protein 1256851..1257186 Clostridium botulinum F str. Langeland 5403319 YP_001390468.1 CDS CLI_1202 NC_009699.1 1257262 1257540 D identified by Glimmer3; hypothetical protein 1257262..1257540 Clostridium botulinum F str. Langeland 5403320 YP_001390469.1 CDS CLI_1203 NC_009699.1 1257541 1258137 D identified by match to protein family HMM PF03956; hypothetical protein 1257541..1258137 Clostridium botulinum F str. Langeland 5404383 YP_001390470.1 CDS maa NC_009699.1 1258426 1258980 D identified by match to protein family HMM PF00132; maltose transacetylase 1258426..1258980 Clostridium botulinum F str. Langeland 5404003 YP_001390471.1 CDS birA NC_009699.1 1259267 1260250 R identified by match to protein family HMM PF02237; match to protein family HMM PF03099; match to protein family HMM PF08279; match to protein family HMM TIGR00121; birA bifunctional protein complement(1259267..1260250) Clostridium botulinum F str. Langeland 5403122 YP_001390472.1 CDS CLI_1206 NC_009699.1 1260414 1260617 D heavy metal-binding protein 1260414..1260617 Clostridium botulinum F str. Langeland 5403240 YP_001390473.1 CDS CLI_1207 NC_009699.1 1260894 1261331 D identified by match to protein family HMM PF00571; hypothetical protein 1260894..1261331 Clostridium botulinum F str. Langeland 5403298 YP_001390474.1 CDS CLI_1208 NC_009699.1 1261491 1262924 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase 1261491..1262924 Clostridium botulinum F str. Langeland 5404737 YP_001390475.1 CDS CLI_1209 NC_009699.1 1263036 1263161 R hypothetical protein complement(1263036..1263161) Clostridium botulinum F str. Langeland 5404259 YP_001390476.1 CDS CLI_1210 NC_009699.1 1263790 1264569 D hypothetical protein 1263790..1264569 Clostridium botulinum F str. Langeland 5402584 YP_001390477.1 CDS mgtE NC_009699.1 1265070 1266404 D identified by match to protein family HMM PF00571; match to protein family HMM PF01769; match to protein family HMM PF03448; match to protein family HMM TIGR00400; magnesium transporter 1265070..1266404 Clostridium botulinum F str. Langeland 5403211 YP_001390478.1 CDS CLI_1212 NC_009699.1 1267406 1268479 D identified by match to protein family HMM PF00266; class V aminotransferase 1267406..1268479 Clostridium botulinum F str. Langeland 5403734 YP_001390479.1 CDS serA NC_009699.1 1268704 1269648 D identified by match to protein family HMM PF00389; match to protein family HMM PF02826; D-3-phosphoglycerate dehydrogenase 1268704..1269648 Clostridium botulinum F str. Langeland 5402864 YP_001390480.1 CDS CLI_1214 NC_009699.1 1269626 1270954 D identified by match to protein family HMM PF06245; hypothetical protein 1269626..1270954 Clostridium botulinum F str. Langeland 5402325 YP_001390481.1 CDS CLI_1215 NC_009699.1 1271542 1272732 D identified by match to protein family HMM PF00258; match to protein family HMM PF00753; metallo-beta-lactamase/flavodoxin domain-containing protein 1271542..1272732 Clostridium botulinum F str. Langeland 5402132 YP_001390482.1 CDS CLI_1216 NC_009699.1 1272890 1277179 D identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241; CoA-substrate-specific enzyme activase 1272890..1277179 Clostridium botulinum F str. Langeland 5402977 YP_001390483.1 CDS CLI_1217 NC_009699.1 1277253 1278767 R identified by match to protein family HMM PF02028; match to protein family HMM TIGR00842; choline/carnitine/betaine transporter complement(1277253..1278767) Clostridium botulinum F str. Langeland 5404790 YP_001390484.1 CDS CLI_1218 NC_009699.1 1279126 1279752 D identified by match to protein family HMM PF00392; match to protein family HMM PF02080; GntR family transcriptional regulator 1279126..1279752 Clostridium botulinum F str. Langeland 5403563 YP_001390485.1 CDS CLI_1219 NC_009699.1 1279863 1280363 D hypothetical protein 1279863..1280363 Clostridium botulinum F str. Langeland 5402148 YP_001390486.1 CDS CLI_1220 NC_009699.1 1280662 1281222 D identified by match to protein family HMM PF00857; pyrazinamidase/nicotinamidase 1280662..1281222 Clostridium botulinum F str. Langeland 5405328 YP_001390487.1 CDS CLI_1221 NC_009699.1 1281380 1281691 D identified by match to protein family HMM PF00581; phage shock protein 1281380..1281691 Clostridium botulinum F str. Langeland 5403163 YP_001390488.1 CDS CLI_1222 NC_009699.1 1281767 1282231 D hypothetical protein 1281767..1282231 Clostridium botulinum F str. Langeland 5405139 YP_001390489.1 CDS CLI_1223 NC_009699.1 1282508 1282708 D hypothetical protein 1282508..1282708 Clostridium botulinum F str. Langeland 5404849 YP_001390490.1 CDS CLI_1224 NC_009699.1 1282885 1283796 D identified by match to protein family HMM PF00515; match to protein family HMM PF07719; hypothetical protein 1282885..1283796 Clostridium botulinum F str. Langeland 5403257 YP_001390491.1 CDS xpt-2 NC_009699.1 1283957 1284529 D Catalyzes the transfer of the phosphoribosyl moiety from 5-phospho--D-ribosyl-1-pyrophosphate (PRib-PP) to the 6-oxo-guanine and -xanthine; xanthine phosphoribosyltransferase 1283957..1284529 Clostridium botulinum F str. Langeland 5403102 YP_001390492.1 CDS CLI_1226 NC_009699.1 1284827 1285408 D hypothetical protein 1284827..1285408 Clostridium botulinum F str. Langeland 5405187 YP_001390493.1 CDS CLI_1227 NC_009699.1 1285718 1287100 D identified by match to protein family HMM PF00581; thiosulfate sulfurtransferase 1285718..1287100 Clostridium botulinum F str. Langeland 5404824 YP_001390494.1 CDS CLI_1228 NC_009699.1 1287296 1287718 D identified by Glimmer3; hypothetical protein 1287296..1287718 Clostridium botulinum F str. Langeland 5402590 YP_001390495.1 CDS CLI_1229 NC_009699.1 1288062 1289165 D identified by match to protein family HMM PF01594; transporter 1288062..1289165 Clostridium botulinum F str. Langeland 5405638 YP_001390496.1 CDS CLI_1230 NC_009699.1 1289345 1289674 D identified by match to protein family HMM PF03819; MazG family protein 1289345..1289674 Clostridium botulinum F str. Langeland 5405392 YP_001390497.1 CDS CLI_1231 NC_009699.1 1289811 1291550 D hypothetical protein 1289811..1291550 Clostridium botulinum F str. Langeland 5402436 YP_001390498.1 CDS CLI_1232 NC_009699.1 1291689 1291856 R identified by Glimmer3; hypothetical protein complement(1291689..1291856) Clostridium botulinum F str. Langeland 5403111 YP_001390499.1 CDS CLI_1233 NC_009699.1 1292132 1292272 D identified by Glimmer3; hypothetical protein 1292132..1292272 Clostridium botulinum F str. Langeland 5405018 YP_001390500.1 CDS CLI_1234 NC_009699.1 1292454 1293653 D identified by Glimmer3; hypothetical protein 1292454..1293653 Clostridium botulinum F str. Langeland 5404298 YP_001390501.1 CDS CLI_1235 NC_009699.1 1294045 1295091 D identified by match to protein family HMM PF01547; ABC transporter substrate-binding protein 1294045..1295091 Clostridium botulinum F str. Langeland 5405058 YP_001390502.1 CDS CLI_1236 NC_009699.1 1295093 1296781 D identified by match to protein family HMM PF00528; ABC transporter permease 1295093..1296781 Clostridium botulinum F str. Langeland 5402301 YP_001390503.1 CDS CLI_1237 NC_009699.1 1296744 1297679 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1296744..1297679 Clostridium botulinum F str. Langeland 5402361 YP_001390504.1 CDS CLI_1238 NC_009699.1 1297744 1298538 R hypothetical protein complement(1297744..1298538) Clostridium botulinum F str. Langeland 5404149 YP_001390505.1 CDS CLI_1239 NC_009699.1 1298842 1300008 D hypothetical protein 1298842..1300008 Clostridium botulinum F str. Langeland 5402516 YP_001390506.1 CDS rpsA NC_009699.1 1300407 1301570 D in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 1300407..1301570 Clostridium botulinum F str. Langeland 5404017 YP_001390507.1 CDS CLI_1241 NC_009699.1 1301753 1302172 D identified by match to protein family HMM PF03061; match to protein family HMM TIGR00051; thioesterase family protein 1301753..1302172 Clostridium botulinum F str. Langeland 5403519 YP_001390508.1 CDS CLI_1242 NC_009699.1 1302344 1302760 D hypothetical protein 1302344..1302760 Clostridium botulinum F str. Langeland 5404015 YP_001390509.1 CDS CLI_1243 NC_009699.1 1303629 1304636 D identified by match to protein family HMM PF04392; ABC transporter substrate-binding protein 1303629..1304636 Clostridium botulinum F str. Langeland 5405649 YP_001390510.1 CDS CLI_1244 NC_009699.1 1304636 1305541 D identified by match to protein family HMM PF02653; ABC transporter permease 1304636..1305541 Clostridium botulinum F str. Langeland 5405454 YP_001390511.1 CDS CLI_1245 NC_009699.1 1305504 1306298 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1305504..1306298 Clostridium botulinum F str. Langeland 5404237 YP_001390512.1 CDS CLI_1246 NC_009699.1 1306628 1306930 D identified by Glimmer3; hypothetical protein 1306628..1306930 Clostridium botulinum F str. Langeland 5402629 YP_001390513.1 CDS asdA NC_009699.1 1307363 1309006 D catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 1307363..1309006 Clostridium botulinum F str. Langeland 5405132 YP_001390514.1 CDS CLI_1248 NC_009699.1 1309134 1310015 R identified by match to protein family HMM PF00892; match to protein family HMM PF03151; match to protein family HMM PF08449; hypothetical protein complement(1309134..1310015) Clostridium botulinum F str. Langeland 5403093 YP_001390515.1 CDS CLI_1249 NC_009699.1 1310261 1310380 D identified by Glimmer3; hypothetical protein 1310261..1310380 Clostridium botulinum F str. Langeland 5403907 YP_001390516.1 CDS CLI_1250 NC_009699.1 1310601 1311698 D identified by match to protein family HMM PF00294; match to protein family HMM PF08279; PfkB family kinase 1310601..1311698 Clostridium botulinum F str. Langeland 5403477 YP_001390517.1 CDS CLI_1251 NC_009699.1 1311692 1312615 D identified by match to protein family HMM PF04227; indigoidine synthase A family protein 1311692..1312615 Clostridium botulinum F str. Langeland 5405140 YP_001390518.1 CDS panE NC_009699.1 1313107 1314018 D identified by match to protein family HMM PF02558; match to protein family HMM PF08546; match to protein family HMM TIGR00745; 2-dehydropantoate 2-reductase 1313107..1314018 Clostridium botulinum F str. Langeland 5402796 YP_001390519.1 CDS fchA NC_009699.1 1314328 1314960 D identified by match to protein family HMM PF04961; methenyltetrahydrofolate cyclohydrolase 1314328..1314960 Clostridium botulinum F str. Langeland 5403751 YP_001390520.1 CDS folD NC_009699.1 1314960 1315808 D identified by match to protein family HMM PF00763; match to protein family HMM PF02882; methylenetetrahydrofolate dehydrogenase 1314960..1315808 Clostridium botulinum F str. Langeland 5402071 YP_001390521.1 CDS CLI_1255 NC_009699.1 1316128 1316922 D identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM PF08282; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; HAD family hydrolase 1316128..1316922 Clostridium botulinum F str. Langeland 5405393 YP_001390522.1 CDS CLI_1256 NC_009699.1 1317149 1317655 R identified by match to protein family HMM PF00583; diamine N-acetyltransferase complement(1317149..1317655) Clostridium botulinum F str. Langeland 5404083 YP_001390523.1 CDS CLI_1257 NC_009699.1 1317848 1317991 D identified by Glimmer3; hypothetical protein 1317848..1317991 Clostridium botulinum F str. Langeland 5403724 YP_001390524.1 CDS CLI_1258 NC_009699.1 1318107 1318838 D hypothetical protein 1318107..1318838 Clostridium botulinum F str. Langeland 5405121 YP_001390525.1 CDS CLI_1259 NC_009699.1 1318958 1319767 D identified by match to protein family HMM PF02535; ZIP family zinc transporter 1318958..1319767 Clostridium botulinum F str. Langeland 5402615 YP_001390526.1 CDS CLI_1260 NC_009699.1 1320439 1320876 D identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738; rrf2 family protein 1320439..1320876 Clostridium botulinum F str. Langeland 5404931 YP_001390527.1 CDS cysK-2 NC_009699.1 1321209 1322138 D identified by match to protein family HMM PF00291; match to protein family HMM TIGR01136; match to protein family HMM TIGR01139; cysteine synthase A 1321209..1322138 Clostridium botulinum F str. Langeland 5402583 YP_001390528.1 CDS CLI_1262 NC_009699.1 1322183 1322851 D identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; His/Glu/Gln/Arg/opine ABC transporter permease 1322183..1322851 Clostridium botulinum F str. Langeland 5404396 YP_001390529.1 CDS CLI_1263 NC_009699.1 1322886 1323710 D identified by match to protein family HMM PF00497; polar amino acid ABC transporter amino acid-binding protein 1322886..1323710 Clostridium botulinum F str. Langeland 5403924 YP_001390530.1 CDS iscS-1 NC_009699.1 1323811 1324941 D identified by match to protein family HMM PF00266; match to protein family HMM PF01212; cysteine desulfhydrase 1323811..1324941 Clostridium botulinum F str. Langeland 5402897 YP_001390531.1 CDS CLI_1265 NC_009699.1 1325013 1325813 D identified by match to protein family HMM PF01171; match to protein family HMM PF06508; match to protein family HMM TIGR00268; hypothetical protein 1325013..1325813 Clostridium botulinum F str. Langeland 5403237 YP_001390532.1 CDS CLI_1266 NC_009699.1 1326200 1326328 D identified by Glimmer3; hypothetical protein 1326200..1326328 Clostridium botulinum F str. Langeland 5404774 YP_001390533.1 CDS mnmA NC_009699.1 1326444 1327514 D catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 1326444..1327514 Clostridium botulinum F str. Langeland 5405591 YP_001390534.1 CDS CLI_1268 NC_009699.1 1327592 1327804 R identified by Glimmer3; hypothetical protein complement(1327592..1327804) Clostridium botulinum F str. Langeland 5405146 YP_001390535.1 CDS CLI_1269 NC_009699.1 1328076 1328795 D identified by match to protein family HMM PF00072; match to protein family HMM PF04397; LytTr family DNA-binding response regulator 1328076..1328795 Clostridium botulinum F str. Langeland 5405368 YP_001390536.1 CDS CLI_1270 NC_009699.1 1328827 1329009 R identified by Glimmer3; hypothetical protein complement(1328827..1329009) Clostridium botulinum F str. Langeland 5403646 YP_001390537.1 CDS CLI_1271 NC_009699.1 1329125 1330135 D identified by match to protein family HMM PF02518; sensor histidine kinase 1329125..1330135 Clostridium botulinum F str. Langeland 5402730 YP_001390538.1 CDS bcrA NC_009699.1 1330511 1331425 D identified by match to protein family HMM PF00005; bacitracin ABC transporter ATP-binding protein 1330511..1331425 Clostridium botulinum F str. Langeland 5403038 YP_001390539.1 CDS CLI_1273 NC_009699.1 1331427 1332170 D hypothetical protein 1331427..1332170 Clostridium botulinum F str. Langeland 5403816 YP_001390540.1 CDS CLI_1274 NC_009699.1 1332772 1334658 D identified by match to protein family HMM PF03009; glycerophosphoryl diester phosphodiesterase family protein 1332772..1334658 Clostridium botulinum F str. Langeland 5405627 YP_001390541.1 CDS CLI_1275 NC_009699.1 1335014 1335178 D hypothetical protein 1335014..1335178 Clostridium botulinum F str. Langeland 5401989 YP_001390542.1 CDS CLI_1276 NC_009699.1 1335218 1338736 R identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176; pyruvate ferredoxin oxidoreductase complement(1335218..1338736) Clostridium botulinum F str. Langeland 5404735 YP_001390543.1 CDS CLI_1277 NC_009699.1 1339039 1339659 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1339039..1339659 Clostridium botulinum F str. Langeland 5402827 YP_001390544.1 CDS CLI_1278 NC_009699.1 1339665 1340912 D identified by match to protein family HMM PF00999; monovalent cation:proton antiporter-2 (CPA2) family protein 1339665..1340912 Clostridium botulinum F str. Langeland 5402756 YP_001390545.1 CDS CLI_1279 NC_009699.1 1341325 1342800 D identified by match to protein family HMM PF02696; hypothetical protein 1341325..1342800 Clostridium botulinum F str. Langeland 5404145 YP_001390546.1 CDS CLI_1280 NC_009699.1 1343381 1345033 D identified by match to protein family HMM PF01593; amine oxidase 1343381..1345033 Clostridium botulinum F str. Langeland 5404591 YP_001390547.1 CDS CLI_1281 NC_009699.1 1345278 1346168 R identified by match to protein family HMM PF00165; AraC family transcriptional regulator complement(1345278..1346168) Clostridium botulinum F str. Langeland 5405302 YP_001390548.1 CDS CLI_1282 NC_009699.1 1346368 1347744 D identified by match to protein family HMM PF07690; match to protein family HMM TIGR00792; sugar transporter 1346368..1347744 Clostridium botulinum F str. Langeland 5403380 YP_001390549.1 CDS CLI_1283 NC_009699.1 1347758 1349086 D identified by match to protein family HMM PF02055; O-glycosyl hydrolase, family protein 1347758..1349086 Clostridium botulinum F str. Langeland 5402873 YP_001390550.1 CDS CLI_1284 NC_009699.1 1349149 1350090 D identified by match to protein family HMM PF00480; ROK family protein 1349149..1350090 Clostridium botulinum F str. Langeland 5401848 YP_001390551.1 CDS CLI_1285 NC_009699.1 1350093 1351538 D identified by match to protein family HMM PF00232; glycosyl hydrolase family protein 1350093..1351538 Clostridium botulinum F str. Langeland 5403024 YP_001390552.1 CDS amyB NC_009699.1 1352211 1353839 D identified by match to protein family HMM PF00686; match to protein family HMM PF01373; beta-amylase 1352211..1353839 Clostridium botulinum F str. Langeland 5404293 YP_001390553.1 CDS tyrS-1 NC_009699.1 1354598 1355800 D catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 1354598..1355800 Clostridium botulinum F str. Langeland 5403717 YP_001390554.1 CDS CLI_1288 NC_009699.1 1356086 1356457 D identified by match to protein family HMM PF00392; GntR family transcriptional regulator 1356086..1356457 Clostridium botulinum F str. Langeland 5404615 YP_001390555.1 CDS CLI_1289 NC_009699.1 1356450 1357322 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1356450..1357322 Clostridium botulinum F str. Langeland 5402557 YP_001390556.1 CDS CLI_1290 NC_009699.1 1357323 1358072 D hypothetical protein 1357323..1358072 Clostridium botulinum F str. Langeland 5405045 YP_001390557.1 CDS CLI_1291 NC_009699.1 1358208 1358576 R hypothetical protein complement(1358208..1358576) Clostridium botulinum F str. Langeland 5404140 YP_001390558.1 CDS CLI_1292 NC_009699.1 1358923 1359816 D hypothetical protein 1358923..1359816 Clostridium botulinum F str. Langeland 5402281 YP_001390559.1 CDS CLI_1293 NC_009699.1 1360002 1364333 D viral A-type inclusion repeat-containing protein 1360002..1364333 Clostridium botulinum F str. Langeland 5402505 YP_001390560.1 CDS CLI_1294 NC_009699.1 1364411 1365925 D identified by match to protein family HMM PF00704; match to protein family HMM PF01476; match to protein family HMM PF08239; glycosyl hydrolase family protein 1364411..1365925 Clostridium botulinum F str. Langeland 5404306 YP_001390561.1 CDS CLI_1295 NC_009699.1 1366099 1367358 D identified by match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254; sensory box-containing diguanylate cyclase 1366099..1367358 Clostridium botulinum F str. Langeland 5405074 YP_001390562.1 CDS CLI_1296 NC_009699.1 1367309 1367428 D identified by Glimmer3; hypothetical protein 1367309..1367428 Clostridium botulinum F str. Langeland 5405004 YP_001390563.1 CDS sdhB NC_009699.1 1367759 1368433 D identified by match to protein family HMM PF01842; match to protein family HMM PF03315; match to protein family HMM TIGR00719; L-serine dehydratase, iron-sulfur-dependent subunit beta 1367759..1368433 Clostridium botulinum F str. Langeland 5404608 YP_001390564.1 CDS sdhA NC_009699.1 1368446 1369336 D identified by match to protein family HMM PF03313; match to protein family HMM TIGR00718; L-serine dehydratase, iron-sulfur-dependent subunit alpha 1368446..1369336 Clostridium botulinum F str. Langeland 5404023 YP_001390565.1 CDS CLI_1300 NC_009699.1 1369761 1369970 D identified by Glimmer3; hypothetical protein 1369761..1369970 Clostridium botulinum F str. Langeland 5402574 YP_001390566.1 CDS CLI_1301 NC_009699.1 1370129 1370272 R identified by Glimmer3; hypothetical protein complement(1370129..1370272) Clostridium botulinum F str. Langeland 5404779 YP_001390567.1 CDS CLI_1302 NC_009699.1 1370356 1370484 D identified by Glimmer3; hypothetical protein 1370356..1370484 Clostridium botulinum F str. Langeland 5402328 YP_001390568.1 CDS CLI_1303 NC_009699.1 1370537 1371121 D hypothetical protein 1370537..1371121 Clostridium botulinum F str. Langeland 5403162 YP_001390569.1 CDS CLI_1304 NC_009699.1 1371439 1372254 R identified by match to protein family HMM PF00561; alpha/beta hydrolase complement(1371439..1372254) Clostridium botulinum F str. Langeland 5403208 YP_001390570.1 CDS CLI_1305 NC_009699.1 1372567 1373535 R identified by match to protein family HMM PF01244; dipeptidase family protein complement(1372567..1373535) Clostridium botulinum F str. Langeland 5404517 YP_001390571.1 CDS CLI_1306 NC_009699.1 1373932 1374624 R identified by Glimmer3; hypothetical protein complement(1373932..1374624) Clostridium botulinum F str. Langeland 5405084 YP_001390572.1 CDS CLI_1307 NC_009699.1 1374731 1376014 R identified by match to protein family HMM PF02687; ABC transporter permease complement(1374731..1376014) Clostridium botulinum F str. Langeland 5402830 YP_001390573.1 CDS CLI_1308 NC_009699.1 1376016 1376831 R identified by Glimmer3; hypothetical protein complement(1376016..1376831) Clostridium botulinum F str. Langeland 5402011 YP_001390574.1 CDS CLI_1309 NC_009699.1 1376868 1377542 R identified by match to protein family HMM PF00005; oligopeptide ABC transporter ATP-binding protein complement(1376868..1377542) Clostridium botulinum F str. Langeland 5401935 YP_001390575.1 CDS CLI_1310 NC_009699.1 1377696 1378544 R identified by match to protein family HMM PF00528; oligopeptide ABC transporter permease complement(1377696..1378544) Clostridium botulinum F str. Langeland 5404254 YP_001390576.1 CDS CLI_1311 NC_009699.1 1378550 1379503 R identified by match to protein family HMM PF00528; oligopeptide ABC transporter permease complement(1378550..1379503) Clostridium botulinum F str. Langeland 5403784 YP_001390577.1 CDS CLI_1312 NC_009699.1 1379701 1381299 R identified by match to protein family HMM PF00496; oligopeptide ABC transporter oligopeptide-binding protein complement(1379701..1381299) Clostridium botulinum F str. Langeland 5403533 YP_001390578.1 CDS CLI_1313 NC_009699.1 1381590 1381751 D hypothetical protein 1381590..1381751 Clostridium botulinum F str. Langeland 5405107 YP_001390579.1 CDS cotJB NC_009699.1 1381785 1382057 D spore coat peptide assembly protein CotJB 1381785..1382057 Clostridium botulinum F str. Langeland 5402610 YP_001390580.1 CDS cotJC NC_009699.1 1382088 1382660 D identified by match to protein family HMM PF05067; spore coat peptide assembly protein CotJC 1382088..1382660 Clostridium botulinum F str. Langeland 5403570 YP_001390581.1 CDS CLI_1316 NC_009699.1 1382890 1383909 D hypothetical protein 1382890..1383909 Clostridium botulinum F str. Langeland 5404547 YP_001390582.1 CDS CLI_1317 NC_009699.1 1383926 1384990 D hypothetical protein 1383926..1384990 Clostridium botulinum F str. Langeland 5402069 YP_001390583.1 CDS CLI_1318 NC_009699.1 1385585 1386076 D identified by match to protein family HMM PF04525; hypothetical protein 1385585..1386076 Clostridium botulinum F str. Langeland 5402764 YP_001390584.1 CDS CLI_1319 NC_009699.1 1386319 1386711 R identified by Glimmer3; hypothetical protein complement(1386319..1386711) Clostridium botulinum F str. Langeland 5404960 YP_001390585.1 CDS dut NC_009699.1 1387058 1387684 D identified by match to protein family HMM PF00692; deoxyuridine 5'-triphosphate nucleotidohydrolase 1387058..1387684 Clostridium botulinum F str. Langeland 5404590 YP_001390586.1 CDS CLI_1321 NC_009699.1 1387744 1387935 R identified by match to protein family HMM TIGR02861; small acid-soluble spore protein, H-type complement(1387744..1387935) Clostridium botulinum F str. Langeland 5402059 YP_001390587.1 CDS CLI_1322 NC_009699.1 1388449 1389189 R hypothetical protein complement(1388449..1389189) Clostridium botulinum F str. Langeland 5404352 YP_001390588.1 CDS CLI_1323 NC_009699.1 1389583 1389729 D identified by similarity to GB:ABK61158.1; hypothetical protein 1389583..1389729 Clostridium botulinum F str. Langeland 5402003 YP_001390589.1 CDS CLI_1324 NC_009699.1 1389847 1390380 R identified by match to protein family HMM PF01381; match to protein family HMM PF07883; DNA-binding protein complement(1389847..1390380) Clostridium botulinum F str. Langeland 5402895 YP_001390590.1 CDS CLI_1325 NC_009699.1 1390804 1391853 D transcriptional regulator 1390804..1391853 Clostridium botulinum F str. Langeland 5402270 YP_001390591.1 CDS CLI_1326 NC_009699.1 1392283 1392870 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1392283..1392870 Clostridium botulinum F str. Langeland 5405067 YP_001390592.1 CDS CLI_1327 NC_009699.1 1392885 1393112 D identified by Glimmer3; hypothetical protein 1392885..1393112 Clostridium botulinum F str. Langeland 5403518 YP_001390593.1 CDS CLI_1328 NC_009699.1 1393109 1393840 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1393109..1393840 Clostridium botulinum F str. Langeland 5405171 YP_001390594.1 CDS CLI_1329 NC_009699.1 1393837 1394529 D hypothetical protein 1393837..1394529 Clostridium botulinum F str. Langeland 5403612 YP_001390595.1 CDS CLI_1330 NC_009699.1 1394781 1395014 D identified by Glimmer3; hypothetical protein 1394781..1395014 Clostridium botulinum F str. Langeland 5404045 YP_001390596.1 CDS CLI_1331 NC_009699.1 1395517 1396953 R identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835; sodium:alanine symporter family protein complement(1395517..1396953) Clostridium botulinum F str. Langeland 5404945 YP_001390597.1 CDS CLI_1332 NC_009699.1 1396983 1397126 D identified by Glimmer3; hypothetical protein 1396983..1397126 Clostridium botulinum F str. Langeland 5403191 YP_001390598.1 CDS CLI_1333 NC_009699.1 1398125 1398433 D identified by Glimmer3; hypothetical protein 1398125..1398433 Clostridium botulinum F str. Langeland 5405072 YP_001390599.1 CDS CLI_1334 NC_009699.1 1399095 1399298 D identified by match to protein family HMM PF01381; DNA-binding protein 1399095..1399298 Clostridium botulinum F str. Langeland 5402571 YP_001390600.1 CDS CLI_1335 NC_009699.1 1399416 1399562 D identified by Glimmer3; hypothetical protein 1399416..1399562 Clostridium botulinum F str. Langeland 5402226 YP_001390601.1 CDS CLI_1336 NC_009699.1 1400192 1400449 D hypothetical protein 1400192..1400449 Clostridium botulinum F str. Langeland 5403610 YP_001390602.1 CDS CLI_1337 NC_009699.1 1400733 1401479 D lipoprotein 1400733..1401479 Clostridium botulinum F str. Langeland 5404821 YP_001390603.1 CDS CLI_1338 NC_009699.1 1401798 1402025 D identified by match to protein family HMM PF00462; match to protein family HMM TIGR02196; rubredoxin 1401798..1402025 Clostridium botulinum F str. Langeland 5404802 YP_001390604.1 CDS CLI_1339 NC_009699.1 1402057 1403517 R identified by match to protein family HMM PF00171; glyceraldehyde-3-phosphate dehydrogenase complement(1402057..1403517) Clostridium botulinum F str. Langeland 5404580 YP_001390605.1 CDS CLI_1340 NC_009699.1 1403557 1404498 R identified by match to protein family HMM PF00070; match to protein family HMM PF07992; thioredoxin reductase complement(1403557..1404498) Clostridium botulinum F str. Langeland 5403542 YP_001390606.1 CDS grdX NC_009699.1 1405270 1405647 D GrdX protein 1405270..1405647 Clostridium botulinum F str. Langeland 5403723 YP_001390607.1 CDS grdE NC_009699.1 1405738 1407024 D identified by match to protein family HMM PF09338; glycine reductase complex component B, alpha and beta subunits 1405738..1407024 Clostridium botulinum F str. Langeland 5401864 YP_001390608.1 CDS grdB NC_009699.1 1407057 1408358 D Selenoprotein. identified by similarity to GB:CAJ69237.1; match to protein family HMM PF07355; match to protein family HMM TIGR01917; match to protein family HMM TIGR01918; glycine reductase complex component B, gamma subunit, selenocysteine-containing 1407057..1408358 Clostridium botulinum F str. Langeland 5403879 YP_001390609.1 CDS trxB NC_009699.1 1408523 1409464 D identified by match to protein family HMM PF00070; match to protein family HMM PF01134; match to protein family HMM PF07992; match to protein family HMM TIGR01292; thioredoxin-disulfide reductase 1408523..1409464 Clostridium botulinum F str. Langeland 5402453 YP_001390610.1 CDS CLI_1345 NC_009699.1 1409498 1409818 D identified by match to protein family HMM PF00085; thioredoxin family protein 1409498..1409818 Clostridium botulinum F str. Langeland 5403476 YP_001390611.1 CDS grdA NC_009699.1 1409904 1410380 D GrdA accepts a carboxymethylselenoether from protein B and transfers it to protein C forming a protein C-bound acetyl-thioester; oxidized GrdA is then reduced by thioredoxin; glycine/sarcosine/betaine reductase complex protein A 1409904..1410380 Clostridium botulinum F str. Langeland 5405214 YP_001390612.1 CDS grdC NC_009699.1 1410605 1412143 D identified by match to protein family HMM PF08545; glycine reductase complex component C subunit beta 1410605..1412143 Clostridium botulinum F str. Langeland 5404691 YP_001390613.1 CDS grdD NC_009699.1 1412159 1413325 D identified by match to protein family HMM PF02504; glycine reductase complex component C subunit alpha 1412159..1413325 Clostridium botulinum F str. Langeland 5404728 YP_001390614.1 CDS CLI_1349 NC_009699.1 1413752 1414363 D responsible for recognizing base lesions in the genome and initiating base excision DNA repair; 3-methyladenine DNA glycosylase 1413752..1414363 Clostridium botulinum F str. Langeland 5405219 YP_001390615.1 CDS CLI_1350 NC_009699.1 1414429 1416654 D identified by match to protein family HMM PF07669; restriction endonuclease family protein 1414429..1416654 Clostridium botulinum F str. Langeland 5404197 YP_001390616.1 CDS CLI_1351 NC_009699.1 1416906 1417025 R identified by Glimmer3; hypothetical protein complement(1416906..1417025) Clostridium botulinum F str. Langeland 5404910 YP_001390617.1 CDS mtnK NC_009699.1 1417090 1418301 D phosphorylates methylthioribose to form methylthioribose-1-phosphate; involved in methionine salvage pathway; methylthioribose kinase 1417090..1418301 Clostridium botulinum F str. Langeland 5402341 YP_001390618.1 CDS mtnA NC_009699.1 1418441 1419490 D isomerizes methylthioribose-1-phosphate into methylthioribulose-1-phosphate; involved in methionine salvage pathway; methylthioribose-1-phosphate isomerase 1418441..1419490 Clostridium botulinum F str. Langeland 5403822 YP_001390619.1 CDS CLI_1354 NC_009699.1 1419502 1419624 D identified by Glimmer3; hypothetical protein 1419502..1419624 Clostridium botulinum F str. Langeland 5402713 YP_001390620.1 CDS CLI_1355 NC_009699.1 1419641 1420288 D identified by match to protein family HMM PF00596; aldolase 1419641..1420288 Clostridium botulinum F str. Langeland 5402526 YP_001390621.1 CDS CLI_1356 NC_009699.1 1420332 1420472 D identified by Glimmer3; hypothetical protein 1420332..1420472 Clostridium botulinum F str. Langeland 5403005 YP_001390622.1 CDS CLI_1357 NC_009699.1 1420462 1421256 D identified by match to protein family HMM PF00455; match to protein family HMM PF08220; match to protein family HMM PF08279; DeoR family transcriptional regulator 1420462..1421256 Clostridium botulinum F str. Langeland 5402882 YP_001390623.1 CDS CLI_1358 NC_009699.1 1421565 1421924 D hypothetical protein 1421565..1421924 Clostridium botulinum F str. Langeland 5402787 YP_001390624.1 CDS CLI_1359 NC_009699.1 1422278 1423153 R identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297; cation efflux family protein complement(1422278..1423153) Clostridium botulinum F str. Langeland 5402996 YP_001390625.1 CDS CLI_1360 NC_009699.1 1423402 1424130 D identified by match to protein family HMM PF04239; hypothetical protein 1423402..1424130 Clostridium botulinum F str. Langeland 5404837 YP_001390626.1 CDS CLI_1361 NC_009699.1 1424292 1424657 D hypothetical protein 1424292..1424657 Clostridium botulinum F str. Langeland 5402987 YP_001390627.1 CDS CLI_1362 NC_009699.1 1424799 1425137 D hypothetical protein 1424799..1425137 Clostridium botulinum F str. Langeland 5402429 YP_001390628.1 CDS CLI_1363 NC_009699.1 1425134 1425607 D hypothetical protein 1425134..1425607 Clostridium botulinum F str. Langeland 5401995 YP_001390629.1 CDS CLI_1364 NC_009699.1 1425990 1426376 D hypothetical protein 1425990..1426376 Clostridium botulinum F str. Langeland 5405666 YP_001390630.1 CDS CLI_1365 NC_009699.1 1426424 1427131 D hypothetical protein 1426424..1427131 Clostridium botulinum F str. Langeland 5404532 YP_001390631.1 CDS CLI_1366 NC_009699.1 1427202 1427372 R identified by Glimmer3; hypothetical protein complement(1427202..1427372) Clostridium botulinum F str. Langeland 5404335 YP_001390632.1 CDS CLI_1367 NC_009699.1 1427753 1428007 R identified by Glimmer3; hypothetical protein complement(1427753..1428007) Clostridium botulinum F str. Langeland 5403004 YP_001390633.1 CDS CLI_1368 NC_009699.1 1429196 1429492 D hypothetical protein 1429196..1429492 Clostridium botulinum F str. Langeland 5404243 YP_001390634.1 CDS CLI_1369 NC_009699.1 1429520 1429816 D hypothetical protein 1429520..1429816 Clostridium botulinum F str. Langeland 5402039 YP_001390635.1 CDS CLI_1370 NC_009699.1 1429868 1432165 D molybdenum cofactor-binding protein; participates in purine salvage; xanthine dehydrogenase subunit XdhA 1429868..1432165 Clostridium botulinum F str. Langeland 5404789 YP_001390636.1 CDS CLI_1371 NC_009699.1 1432179 1433063 D FAD-binding subunit; with XdhA and XdhC participates in purine salvage; xanthine dehydrogenase subunit XdhB 1432179..1433063 Clostridium botulinum F str. Langeland 5403876 YP_001390637.1 CDS CLI_1372 NC_009699.1 1433095 1433568 D identified by match to protein family HMM PF00111; match to protein family HMM PF01799; xanthine dehydrogenase family protein, iron-sulfur binding subunit 1433095..1433568 Clostridium botulinum F str. Langeland 5404695 YP_001390638.1 CDS CLI_1373 NC_009699.1 1433684 1434157 D identified by match to protein family HMM PF00383; guanine deaminase 1433684..1434157 Clostridium botulinum F str. Langeland 5404729 YP_001390639.1 CDS topB NC_009699.1 1434546 1436741 D decatenates replicating daughter chromosomes; DNA topoisomerase III 1434546..1436741 Clostridium botulinum F str. Langeland 5403977 YP_001390640.1 CDS CLI_1375 NC_009699.1 1437194 1437799 D identified by match to protein family HMM PF02659; hypothetical protein 1437194..1437799 Clostridium botulinum F str. Langeland 5405629 YP_001390641.1 CDS CLI_1376 NC_009699.1 1437865 1438101 D hypothetical protein 1437865..1438101 Clostridium botulinum F str. Langeland 5402551 YP_001390642.1 CDS CLI_1377 NC_009699.1 1438178 1438309 R identified by Glimmer3; hypothetical protein complement(1438178..1438309) Clostridium botulinum F str. Langeland 5404787 YP_001390643.1 CDS CLI_1378 NC_009699.1 1438827 1439480 D similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; translaldolase 1438827..1439480 Clostridium botulinum F str. Langeland 5403926 YP_001390644.1 CDS CLI_1379 NC_009699.1 1439879 1441543 D identified by match to protein family HMM PF00753; match to protein family HMM PF07521; match to protein family HMM TIGR00649; RNA-metabolising metallo-beta-lactamase 1439879..1441543 Clostridium botulinum F str. Langeland 5403849 YP_001390645.1 CDS CLI_1380 NC_009699.1 1441848 1443200 D identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835; sodium:alanine symporter family protein 1441848..1443200 Clostridium botulinum F str. Langeland 5405335 YP_001390646.1 CDS CLI_1381 NC_009699.1 1443515 1444360 D identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254; diguanylate cyclase 1443515..1444360 Clostridium botulinum F str. Langeland 5403883 YP_001390647.1 CDS CLI_1382 NC_009699.1 1444353 1446005 D STE-like transcription factor domain-containing protein 1444353..1446005 Clostridium botulinum F str. Langeland 5404917 YP_001390648.1 CDS CLI_1383 NC_009699.1 1446011 1447273 D identified by match to protein family HMM PF00535; glycosyl transferase family protein 1446011..1447273 Clostridium botulinum F str. Langeland 5403824 YP_001390649.1 CDS CLI_1384 NC_009699.1 1447345 1449441 D cellulose synthase domain-containing protein 1447345..1449441 Clostridium botulinum F str. Langeland 5403791 YP_001390650.1 CDS CLI_1385 NC_009699.1 1449858 1450952 D hypothetical protein 1449858..1450952 Clostridium botulinum F str. Langeland 5405377 YP_001390651.1 CDS CLI_1386 NC_009699.1 1451180 1451344 D hypothetical protein 1451180..1451344 Clostridium botulinum F str. Langeland 5404111 YP_001390652.1 CDS CLI_1387 NC_009699.1 1451679 1452482 D hypothetical protein 1451679..1452482 Clostridium botulinum F str. Langeland 5404277 YP_001390653.1 CDS CLI_1388 NC_009699.1 1452759 1453025 D identified by match to protein family HMM PF02583; hypothetical protein 1452759..1453025 Clostridium botulinum F str. Langeland 5404389 YP_001390654.1 CDS CLI_1389 NC_009699.1 1453062 1455497 D identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR00003; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525; copper-translocating P-type ATPase 1453062..1455497 Clostridium botulinum F str. Langeland 5403785 YP_001390655.1 CDS copZ NC_009699.1 1455620 1455835 D identified by match to protein family HMM PF00403; copper chaperone CopZ 1455620..1455835 Clostridium botulinum F str. Langeland 5404033 YP_001390656.1 CDS CLI_1391 NC_009699.1 1456268 1458649 D identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; cation-transporting ATPase, P-type 1456268..1458649 Clostridium botulinum F str. Langeland 5404048 YP_001390657.1 CDS CLI_1392 NC_009699.1 1459128 1460846 D identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease 1459128..1460846 Clostridium botulinum F str. Langeland 5403634 YP_001390658.1 CDS CLI_1393 NC_009699.1 1461185 1461979 D identified by match to protein family HMM PF02517; CAAX amino terminal protease family protein 1461185..1461979 Clostridium botulinum F str. Langeland 5403174 YP_001390659.1 CDS CLI_1394 NC_009699.1 1462143 1462499 D identified by match to protein family HMM PF02579; dinitrogenase iron-molybdenum cofactor family protein 1462143..1462499 Clostridium botulinum F str. Langeland 5405435 YP_001390660.1 CDS CLI_1395 NC_009699.1 1462770 1463462 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 1462770..1463462 Clostridium botulinum F str. Langeland 5402408 YP_001390661.1 CDS CLI_1396 NC_009699.1 1463459 1464706 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 1463459..1464706 Clostridium botulinum F str. Langeland 5404270 YP_001390662.1 CDS CLI_1397 NC_009699.1 1464919 1465584 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1464919..1465584 Clostridium botulinum F str. Langeland 5405449 YP_001390663.1 CDS CLI_1398 NC_009699.1 1465596 1467944 D identified by match to protein family HMM PF02687; ABC transporter permease 1465596..1467944 Clostridium botulinum F str. Langeland 5404433 YP_001390664.1 CDS CLI_1399 NC_009699.1 1468293 1469186 D identified by match to protein family HMM PF02645; match to protein family HMM TIGR00762; DegV family protein 1468293..1469186 Clostridium botulinum F str. Langeland 5405406 YP_001390665.1 CDS CLI_1400 NC_009699.1 1469223 1469687 R identified by match to protein family HMM PF01243; 5-nitroimidazole antibiotic resistance protein complement(1469223..1469687) Clostridium botulinum F str. Langeland 5403386 YP_001390666.1 CDS CLI_1401 NC_009699.1 1469963 1470430 D identified by Glimmer3; hypothetical protein 1469963..1470430 Clostridium botulinum F str. Langeland 5405433 YP_001390667.1 CDS CLI_1402 NC_009699.1 1470640 1470870 D identified by Glimmer3; hypothetical protein 1470640..1470870 Clostridium botulinum F str. Langeland 5404331 YP_001390668.1 CDS CLI_1403 NC_009699.1 1470996 1471178 D identified by similarity to GB:CAC97788.1; hypothetical protein 1470996..1471178 Clostridium botulinum F str. Langeland 5405222 YP_001390669.1 CDS CLI_1404 NC_009699.1 1471192 1471437 D identified by Glimmer3; hypothetical protein 1471192..1471437 Clostridium botulinum F str. Langeland 5403933 YP_001390670.1 CDS CLI_1405 NC_009699.1 1471595 1472200 D lipoprotein 1471595..1472200 Clostridium botulinum F str. Langeland 5403123 YP_001390671.1 CDS CLI_1406 NC_009699.1 1472652 1472867 D identified by similarity to GB:AAR06054.1; hypothetical protein 1472652..1472867 Clostridium botulinum F str. Langeland 5403256 YP_001390672.1 CDS CLI_1407 NC_009699.1 1472905 1473333 D identified by match to protein family HMM PF01230; HIT family protein 1472905..1473333 Clostridium botulinum F str. Langeland 5405247 YP_001390673.1 CDS CLI_1408 NC_009699.1 1473488 1473862 R hypothetical protein complement(1473488..1473862) Clostridium botulinum F str. Langeland 5402693 YP_001390674.1 CDS CLI_1409 NC_009699.1 1474153 1474911 D identified by match to protein family HMM PF01478; match to protein family HMM PF06750; type IV leader peptidase family protein 1474153..1474911 Clostridium botulinum F str. Langeland 5404570 YP_001390675.1 CDS CLI_1410 NC_009699.1 1475511 1476638 D identified by match to protein family HMM PF07907; hypothetical protein 1475511..1476638 Clostridium botulinum F str. Langeland 5404095 YP_001390676.1 CDS trkA NC_009699.1 1477426 1478793 D involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; potassium transporter peripheral membrane protein 1477426..1478793 Clostridium botulinum F str. Langeland 5402387 YP_001390677.1 CDS trkH NC_009699.1 1478790 1480235 D identified by match to protein family HMM PF02386; Trk system potassium uptake protein TrkH 1478790..1480235 Clostridium botulinum F str. Langeland 5403856 YP_001390678.1 CDS CLI_1413 NC_009699.1 1480638 1480772 D identified by Glimmer3; hypothetical protein 1480638..1480772 Clostridium botulinum F str. Langeland 5405210 YP_001390679.1 CDS CLI_1414 NC_009699.1 1480753 1483320 D identified by match to protein family HMM PF00580; match to protein family HMM PF00929; match to protein family HMM TIGR00573; helicase, UvrD/REP/exonuclease family protein 1480753..1483320 Clostridium botulinum F str. Langeland 5402738 YP_001390680.1 CDS CLI_1415 NC_009699.1 1484153 1485283 R identified by match to protein family HMM PF07853; hypothetical protein complement(1484153..1485283) Clostridium botulinum F str. Langeland 5403932 YP_001390681.1 CDS CLI_1416 NC_009699.1 1485298 1485672 R identified by match to protein family HMM PF00392; GntR family transcriptional regulator complement(1485298..1485672) Clostridium botulinum F str. Langeland 5403922 YP_001390682.1 CDS CLI_1417 NC_009699.1 1486131 1486910 R identified by match to protein family HMM PF01476; match to protein family HMM PF07486; cell wall hydrolase complement(1486131..1486910) Clostridium botulinum F str. Langeland 5403157 YP_001390683.1 CDS CLI_1418 NC_009699.1 1487250 1487375 D identified by Glimmer3; hypothetical protein 1487250..1487375 Clostridium botulinum F str. Langeland 5404710 YP_001390684.1 CDS rbr NC_009699.1 1487699 1488286 D identified by match to protein family HMM PF02915; rubrerythrin 1487699..1488286 Clostridium botulinum F str. Langeland 5403039 YP_001390685.1 CDS CLI_1420 NC_009699.1 1488772 1490232 D identified by match to protein family HMM PF04122; N-acetylmuramoyl-L-alanine amidase 1488772..1490232 Clostridium botulinum F str. Langeland 5405081 YP_001390686.1 CDS ptsG NC_009699.1 1490534 1492564 R identified by match to protein family HMM PF00358; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826; match to protein family HMM TIGR00830; match to protein family HMM TIGR02002; PTS system glucose-specific transporter subunit IIABC complement(1490534..1492564) Clostridium botulinum F str. Langeland 5405575 YP_001390687.1 CDS CLI_1422 NC_009699.1 1493020 1493667 D identified by match to protein family HMM PF01255; UDP pyrophosphate synthetase-like protein 1493020..1493667 Clostridium botulinum F str. Langeland 5401917 YP_001390688.1 CDS CLI_1423 NC_009699.1 1493810 1493926 D identified by Glimmer3; hypothetical protein 1493810..1493926 Clostridium botulinum F str. Langeland 5404783 YP_001390689.1 CDS CLI_1424 NC_009699.1 1494055 1494573 D identified by Glimmer3; hypothetical protein 1494055..1494573 Clostridium botulinum F str. Langeland 5405202 YP_001390690.1 CDS CLI_1425 NC_009699.1 1494868 1495281 D identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738; transcriptional regulator 1494868..1495281 Clostridium botulinum F str. Langeland 5403390 YP_001390691.1 CDS CLI_1426 NC_009699.1 1495478 1497364 D identified by match to protein family HMM PF03063; match to protein family HMM TIGR01702; carbon monoxide dehydrogenase 1495478..1497364 Clostridium botulinum F str. Langeland 5402973 YP_001390692.1 CDS CLI_1427 NC_009699.1 1497510 1497953 D identified by match to protein family HMM PF00037; nitrate reductase, iron-sulfur subunit 1497510..1497953 Clostridium botulinum F str. Langeland 5404447 YP_001390693.1 CDS noxA NC_009699.1 1498153 1499379 D identified by match to protein family HMM PF00070; match to protein family HMM PF07992; nitrate reductase, NADH oxidase subunit 1498153..1499379 Clostridium botulinum F str. Langeland 5402768 YP_001390694.1 CDS CLI_1429 NC_009699.1 1499549 1500220 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 1499549..1500220 Clostridium botulinum F str. Langeland 5402994 YP_001390695.1 CDS CLI_1430 NC_009699.1 1500208 1501305 D identified by match to protein family HMM PF02518; sensor histidine kinase 1500208..1501305 Clostridium botulinum F str. Langeland 5403805 YP_001390696.1 CDS CLI_1431 NC_009699.1 1501371 1502783 D identified by match to protein family HMM PF02687; ABC transporter permease 1501371..1502783 Clostridium botulinum F str. Langeland 5403301 YP_001390697.1 CDS CLI_1432 NC_009699.1 1502789 1503454 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1502789..1503454 Clostridium botulinum F str. Langeland 5402234 YP_001390698.1 CDS CLI_1433 NC_009699.1 1503584 1504558 R identified by match to protein family HMM PF00892; match to protein family HMM PF03151; transporter complement(1503584..1504558) Clostridium botulinum F str. Langeland 5405159 YP_001390699.1 CDS CLI_1434 NC_009699.1 1504950 1505117 R identified by Glimmer3; hypothetical protein complement(1504950..1505117) Clostridium botulinum F str. Langeland 5405344 YP_001390700.1 CDS CLI_1435 NC_009699.1 1505266 1505952 R identified by match to protein family HMM PF00027; match to protein family HMM PF00325; Crp/FNR family transcriptional regulator complement(1505266..1505952) Clostridium botulinum F str. Langeland 5404504 YP_001390701.1 CDS CLI_1436 NC_009699.1 1506069 1507268 D identified by match to protein family HMM PF07690; major facilitator superfamily protein 1506069..1507268 Clostridium botulinum F str. Langeland 5403814 YP_001390702.1 CDS CLI_1437 NC_009699.1 1507571 1508485 D identified by match to protein family HMM PF01497; iron ABC transporter substrate-binding protein 1507571..1508485 Clostridium botulinum F str. Langeland 5405544 YP_001390703.1 CDS CLI_1438 NC_009699.1 1508507 1509505 D identified by match to protein family HMM PF01032; iron ABC transporter permease 1508507..1509505 Clostridium botulinum F str. Langeland 5402645 YP_001390704.1 CDS CLI_1439 NC_009699.1 1509508 1510269 D identified by match to protein family HMM PF00005; iron ABC transporter ATP-binding protein 1509508..1510269 Clostridium botulinum F str. Langeland 5401921 YP_001390705.1 CDS CLI_1440 NC_009699.1 1510490 1510825 R hypothetical protein complement(1510490..1510825) Clostridium botulinum F str. Langeland 5405204 YP_001390706.1 CDS CLI_1441 NC_009699.1 1510900 1512177 R identified by match to protein family HMM PF00037; (Fe-S)-binding protein complement(1510900..1512177) Clostridium botulinum F str. Langeland 5402367 YP_001390707.1 CDS CLI_1442 NC_009699.1 1512597 1513442 D identified by match to protein family HMM PF01380; match to protein family HMM PF01418; RpiR family transcriptional regulator 1512597..1513442 Clostridium botulinum F str. Langeland 5404133 YP_001390708.1 CDS murQ NC_009699.1 1513722 1514630 D catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway; N-acetylmuramic acid 6-phosphate etherase 1513722..1514630 Clostridium botulinum F str. Langeland 5401854 YP_001390709.1 CDS CLI_1444 NC_009699.1 1514743 1516098 D identified by match to protein family HMM PF00367; match to protein family HMM PF02378; PTS system transporter subunit IIBC 1514743..1516098 Clostridium botulinum F str. Langeland 5402433 YP_001390710.1 CDS CLI_1445 NC_009699.1 1516524 1517600 D identified by match to protein family HMM PF05913; hypothetical protein 1516524..1517600 Clostridium botulinum F str. Langeland 5402149 YP_001390711.1 CDS CLI_1446 NC_009699.1 1517932 1518540 D identified by match to protein family HMM PF06475; hypothetical protein 1517932..1518540 Clostridium botulinum F str. Langeland 5402089 YP_001390712.1 CDS CLI_1447 NC_009699.1 1518823 1519464 D identified by match to protein family HMM PF06555; hypothetical protein 1518823..1519464 Clostridium botulinum F str. Langeland 5403923 YP_001390713.1 CDS CLI_1448 NC_009699.1 1519770 1521641 D hypothetical protein 1519770..1521641 Clostridium botulinum F str. Langeland 5403335 YP_001390714.1 CDS CLI_1449 NC_009699.1 1521694 1522932 D cell-surface protein 1521694..1522932 Clostridium botulinum F str. Langeland 5403692 YP_001390715.1 CDS CLI_1450 NC_009699.1 1522932 1523474 D identified by Glimmer3; hypothetical protein 1522932..1523474 Clostridium botulinum F str. Langeland 5403155 YP_001390716.1 CDS CLI_1451 NC_009699.1 1523782 1524054 R hypothetical protein complement(1523782..1524054) Clostridium botulinum F str. Langeland 5404369 YP_001390717.1 CDS CLI_1452 NC_009699.1 1524551 1526269 D identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF06875; methyl-accepting chemotaxis protein 1524551..1526269 Clostridium botulinum F str. Langeland 5403527 YP_001390718.1 CDS CLI_1453 NC_009699.1 1526676 1528265 D identified by match to protein family HMM PF00496; peptide/opine/nickel uptake ABC transporter substrate-binding protein 1526676..1528265 Clostridium botulinum F str. Langeland 5402649 YP_001390719.1 CDS CLI_1454 NC_009699.1 1528262 1529218 D identified by match to protein family HMM PF00528; peptide/opine/nickel uptake ABC transporter permease 1528262..1529218 Clostridium botulinum F str. Langeland 5401951 YP_001390720.1 CDS CLI_1455 NC_009699.1 1529227 1530027 D identified by match to protein family HMM PF00528; peptide/opine/nickel uptake ABC transporter permease 1529227..1530027 Clostridium botulinum F str. Langeland 5404043 YP_001390721.1 CDS CLI_1456 NC_009699.1 1530126 1530920 D identified by match to protein family HMM PF00005; peptide/opine/nickel uptake ABC transporter ATP-binding protein 1530126..1530920 Clostridium botulinum F str. Langeland 5401855 YP_001390722.1 CDS CLI_1457 NC_009699.1 1530914 1531726 D identified by match to protein family HMM PF00005; peptide/opine/nickel uptake ABC transporter ATP-binding protein 1530914..1531726 Clostridium botulinum F str. Langeland 5404037 YP_001390723.1 CDS CLI_1458 NC_009699.1 1532184 1532696 D lipoprotein 1532184..1532696 Clostridium botulinum F str. Langeland 5402939 YP_001390724.1 CDS CLI_1459 NC_009699.1 1532988 1533776 R identified by match to protein family HMM PF00950; manganese/zinc/iron chelate ABC transporter permease complement(1532988..1533776) Clostridium botulinum F str. Langeland 5404500 YP_001390725.1 CDS CLI_1460 NC_009699.1 1533776 1534429 R identified by match to protein family HMM PF00005; manganese/zinc/iron chelate ABC transporter ATP-binding protein complement(1533776..1534429) Clostridium botulinum F str. Langeland 5404555 YP_001390726.1 CDS CLI_1461 NC_009699.1 1534650 1535588 D identified by match to protein family HMM PF01297; manganese/zinc/iron chelate ABC transporter substrate-binding protein 1534650..1535588 Clostridium botulinum F str. Langeland 5405573 YP_001390727.1 CDS CLI_1462 NC_009699.1 1535702 1536193 R hypothetical protein complement(1535702..1536193) Clostridium botulinum F str. Langeland 5404292 YP_001390728.1 CDS CLI_1463 NC_009699.1 1536847 1538613 D identified by match to protein family HMM PF00271; helicase 1536847..1538613 Clostridium botulinum F str. Langeland 5402965 YP_001390729.1 CDS CLI_1464 NC_009699.1 1538748 1539296 D identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254; diguanylate cyclase 1538748..1539296 Clostridium botulinum F str. Langeland 5403263 YP_001390730.1 CDS CLI_1465 NC_009699.1 1540208 1541215 D lipoprotein 1540208..1541215 Clostridium botulinum F str. Langeland 5402140 YP_001390731.1 CDS CLI_1466 NC_009699.1 1541187 1541948 D identified by match to protein family HMM PF00528; ABC transporter permease 1541187..1541948 Clostridium botulinum F str. Langeland 5402722 YP_001390732.1 CDS CLI_1467 NC_009699.1 1542088 1542687 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1542088..1542687 Clostridium botulinum F str. Langeland 5402207 YP_001390733.1 CDS CLI_1468 NC_009699.1 1542966 1543439 D identified by match to protein family HMM PF01475; FUR family transcriptional regulator 1542966..1543439 Clostridium botulinum F str. Langeland 5401872 YP_001390734.1 CDS CLI_1469 NC_009699.1 1543409 1543882 D identified by match to protein family HMM PF02001; hypothetical protein 1543409..1543882 Clostridium botulinum F str. Langeland 5402806 YP_001390735.1 CDS CLI_1470 NC_009699.1 1544009 1545280 D identified by match to protein family HMM PF00246; match to protein family HMM PF01471; match to protein family HMM PF01476; zinc carboxypeptidase family protein 1544009..1545280 Clostridium botulinum F str. Langeland 5403021 YP_001390736.1 CDS CLI_1471 NC_009699.1 1545325 1545441 D identified by Glimmer3; hypothetical protein 1545325..1545441 Clostridium botulinum F str. Langeland 5402196 YP_001390737.1 CDS rnz NC_009699.1 1545570 1546610 D member of metallo-beta-lactamase family; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions; ribonuclease Z 1545570..1546610 Clostridium botulinum F str. Langeland 5405504 YP_001390738.1 CDS CLI_1473 NC_009699.1 1546955 1548274 D identified by match to protein family HMM PF00324; amino acid permease 1546955..1548274 Clostridium botulinum F str. Langeland 5404491 YP_001390739.1 CDS CLI_1474 NC_009699.1 1548418 1548795 D identified by match to protein family HMM PF08000; hypothetical protein 1548418..1548795 Clostridium botulinum F str. Langeland 5405628 YP_001390740.1 CDS CLI_1475 NC_009699.1 1548808 1549965 D identified by match to protein family HMM PF02518; match to protein family HMM PF07730; sensor histidine kinase 1548808..1549965 Clostridium botulinum F str. Langeland 5404391 YP_001390741.1 CDS CLI_1476 NC_009699.1 1550250 1550903 D identified by match to protein family HMM PF00072; match to protein family HMM PF00196; LuxR family DNA-binding response regulator 1550250..1550903 Clostridium botulinum F str. Langeland 5403283 YP_001390742.1 CDS CLI_1477 NC_009699.1 1551074 1552012 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1551074..1552012 Clostridium botulinum F str. Langeland 5401844 YP_001390743.1 CDS CLI_1478 NC_009699.1 1552118 1553296 D identified by match to protein family HMM PF01061; ABC transporter permease 1552118..1553296 Clostridium botulinum F str. Langeland 5403754 YP_001390744.1 CDS CLI_1479 NC_009699.1 1553298 1554398 D identified by match to protein family HMM PF01061; hypothetical protein 1553298..1554398 Clostridium botulinum F str. Langeland 5403930 YP_001390745.1 CDS CLI_1480 NC_009699.1 1554417 1554638 D identified by Glimmer3; hypothetical protein 1554417..1554638 Clostridium botulinum F str. Langeland 5404269 YP_001390746.1 CDS CLI_1481 NC_009699.1 1555167 1555718 R identified by match to protein family HMM PF00881; nitroreductase family protein complement(1555167..1555718) Clostridium botulinum F str. Langeland 5402076 YP_001390747.1 CDS CLI_1482 NC_009699.1 1556276 1556767 R hypothetical protein complement(1556276..1556767) Clostridium botulinum F str. Langeland 5405637 YP_001390748.1 CDS CLI_1483 NC_009699.1 1556935 1557138 R identified by match to protein family HMM PF00313; major cold shock protein complement(1556935..1557138) Clostridium botulinum F str. Langeland 5404176 YP_001390749.1 CDS pepD-1 NC_009699.1 1557405 1558868 D identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01893; aminoacyl-histidine dipeptidase 1557405..1558868 Clostridium botulinum F str. Langeland 5401882 YP_001390750.1 CDS CLI_1485 NC_009699.1 1558926 1559819 D identified by match to protein family HMM PF00515; match to protein family HMM PF07719; hypothetical protein 1558926..1559819 Clostridium botulinum F str. Langeland 5402576 YP_001390751.1 CDS pdxK NC_009699.1 1560087 1560923 D catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal; pyridoxamine kinase 1560087..1560923 Clostridium botulinum F str. Langeland 5404093 YP_001390752.1 CDS CLI_1487 NC_009699.1 1561212 1561850 R identified by match to protein family HMM PF01625; methionine-S-sulfoxide reductase complement(1561212..1561850) Clostridium botulinum F str. Langeland 5403606 YP_001390753.1 CDS CLI_1488 NC_009699.1 1562664 1563428 D identified by match to protein family HMM PF00005; peptide ABC transporter ATP-binding protein 1562664..1563428 Clostridium botulinum F str. Langeland 5404926 YP_001390754.1 CDS CLI_1489 NC_009699.1 1563415 1565304 D identified by match to protein family HMM PF02687; peptide ABC transporter permease 1563415..1565304 Clostridium botulinum F str. Langeland 5402620 YP_001390755.1 CDS CLI_1490 NC_009699.1 1565481 1565978 D hypothetical protein 1565481..1565978 Clostridium botulinum F str. Langeland 5404791 YP_001390756.1 CDS CLI_1491 NC_009699.1 1566421 1567122 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 1566421..1567122 Clostridium botulinum F str. Langeland 5402580 YP_001390757.1 CDS CLI_1492 NC_009699.1 1567124 1568101 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase 1567124..1568101 Clostridium botulinum F str. Langeland 5402021 YP_001390758.1 CDS CLI_1493 NC_009699.1 1568175 1568930 D identified by match to protein family HMM PF00005; peptide ABC transporter ATP-binding protein 1568175..1568930 Clostridium botulinum F str. Langeland 5404518 YP_001390759.1 CDS CLI_1494 NC_009699.1 1568920 1570728 D peptide ABC transporter permease 1568920..1570728 Clostridium botulinum F str. Langeland 5401943 YP_001390760.1 CDS CLI_1495 NC_009699.1 1570797 1571519 D hypothetical protein 1570797..1571519 Clostridium botulinum F str. Langeland 5404786 YP_001390761.1 CDS CLI_1496 NC_009699.1 1571866 1572900 D hypothetical protein 1571866..1572900 Clostridium botulinum F str. Langeland 5405396 YP_001390762.1 CDS CLI_1497 NC_009699.1 1573283 1574461 D identified by match to protein family HMM PF00155; aminotransferase, classes I and II 1573283..1574461 Clostridium botulinum F str. Langeland 5405618 YP_001390763.1 CDS CLI_1498 NC_009699.1 1574648 1575466 D identified by match to protein family HMM PF00497; amino acid ABC transporter substrate-binding protein 1574648..1575466 Clostridium botulinum F str. Langeland 5402511 YP_001390764.1 CDS CLI_1499 NC_009699.1 1575479 1576144 D identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; His/Glu/Gln/Arg/opine ABC transporter permease 1575479..1576144 Clostridium botulinum F str. Langeland 5404514 YP_001390765.1 CDS CLI_1500 NC_009699.1 1576163 1576900 D identified by match to protein family HMM PF00005; polar amino acid ABC transporter ATP-binding protein 1576163..1576900 Clostridium botulinum F str. Langeland 5405577 YP_001390766.1 CDS CLI_1501 NC_009699.1 1577325 1577543 D identified by match to protein family HMM PF01381; DNA-binding protein 1577325..1577543 Clostridium botulinum F str. Langeland 5403139 YP_001390767.1 CDS CLI_1502 NC_009699.1 1577742 1579016 R identified by match to protein family HMM PF00768; D-alanyl-D-alanine carboxypeptidase complement(1577742..1579016) Clostridium botulinum F str. Langeland 5402202 YP_001390768.1 CDS CLI_1503 NC_009699.1 1579315 1579938 D identified by match to protein family HMM PF00293; MutT/NUDIX NTP pyrophosphatase 1579315..1579938 Clostridium botulinum F str. Langeland 5403435 YP_001390769.1 CDS CLI_1504 NC_009699.1 1579989 1580336 R hypothetical protein complement(1579989..1580336) Clostridium botulinum F str. Langeland 5405492 YP_001390770.1 CDS CLI_1505 NC_009699.1 1580682 1581845 D identified by match to protein family HMM PF00465; NADH-dependent butanol dehydrogenase 1580682..1581845 Clostridium botulinum F str. Langeland 5403699 YP_001390771.1 CDS CLI_1506 NC_009699.1 1582229 1582453 D identified by Glimmer3; hypothetical protein 1582229..1582453 Clostridium botulinum F str. Langeland 5402871 YP_001390772.1 CDS CLI_1507 NC_009699.1 1582626 1584146 D identified by match to protein family HMM PF03600; match to protein family HMM PF03606; match to protein family HMM PF06808; C4-dicarboxylate transporter 1582626..1584146 Clostridium botulinum F str. Langeland 5404342 YP_001390773.1 CDS CLI_1508 NC_009699.1 1584285 1585766 R catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase complement(1584285..1585766) Clostridium botulinum F str. Langeland 5402002 YP_001390774.1 CDS CLI_1509 NC_009699.1 1586224 1587030 D identified by match to protein family HMM PF00497; polar amino acid ABC transporter amino acid-binding protein 1586224..1587030 Clostridium botulinum F str. Langeland 5404377 YP_001390775.1 CDS CLI_1510 NC_009699.1 1587032 1587691 D identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; His/Glu/Gln/Arg/opine ABC transporter permease 1587032..1587691 Clostridium botulinum F str. Langeland 5402591 YP_001390776.1 CDS CLI_1511 NC_009699.1 1587821 1588369 D hypothetical protein 1587821..1588369 Clostridium botulinum F str. Langeland 5404056 YP_001390777.1 CDS CLI_1512 NC_009699.1 1588464 1590476 D identified by Glimmer3; hypothetical protein 1588464..1590476 Clostridium botulinum F str. Langeland 5405387 YP_001390778.1 CDS CLI_1513 NC_009699.1 1590827 1591129 D identified by Glimmer3; hypothetical protein 1590827..1591129 Clostridium botulinum F str. Langeland 5404714 YP_001390779.1 CDS CLI_1514 NC_009699.1 1591332 1593575 D identified by match to protein family HMM PF02491; cell division protein FtsA 1591332..1593575 Clostridium botulinum F str. Langeland 5404346 YP_001390780.1 CDS CLI_1515 NC_009699.1 1593664 1594842 D identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891; amidohydrolase 1593664..1594842 Clostridium botulinum F str. Langeland 5405243 YP_001390781.1 CDS CLI_1516 NC_009699.1 1594898 1595749 D identified by match to protein family HMM PF01520; N-acetylmuramoyl-L-alanine amidase 1594898..1595749 Clostridium botulinum F str. Langeland 5403940 YP_001390782.1 CDS CLI_1517 NC_009699.1 1596229 1597182 D identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00005; RluA family pseudouridine synthase 1596229..1597182 Clostridium botulinum F str. Langeland 5401958 YP_001390783.1 CDS spoVB-1 NC_009699.1 1597214 1598821 D identified by match to protein family HMM PF01554; match to protein family HMM PF01943; match to protein family HMM PF03023; stage V sporulation protein B 1597214..1598821 Clostridium botulinum F str. Langeland 5404164 YP_001390784.1 CDS CLI_1519 NC_009699.1 1598858 1600363 R identified by match to protein family HMM PF01554; match to protein family HMM PF01943; match to protein family HMM TIGR02900; polysaccharide biosynthesis family protein complement(1598858..1600363) Clostridium botulinum F str. Langeland 5402075 YP_001390785.1 CDS CLI_1520 NC_009699.1 1600683 1601246 D hypothetical protein 1600683..1601246 Clostridium botulinum F str. Langeland 5404496 YP_001390786.1 CDS CLI_1521 NC_009699.1 1601267 1601674 R hypothetical protein complement(1601267..1601674) Clostridium botulinum F str. Langeland 5403112 YP_001390787.1 CDS CLI_1522 NC_009699.1 1602763 1603962 D identified by match to protein family HMM PF00465; alcohol dehydrogenase 1602763..1603962 Clostridium botulinum F str. Langeland 5404952 YP_001390788.1 CDS CLI_1523 NC_009699.1 1604322 1606640 D identified by match to protein family HMM PF05362; ATP-dependent protease 1604322..1606640 Clostridium botulinum F str. Langeland 5401883 YP_001390789.1 CDS npr-1 NC_009699.1 1607966 1609684 R identified by match to protein family HMM PF01447; match to protein family HMM PF02868; match to protein family HMM PF03413; thermolysin metallopeptidase complement(1607966..1609684) Clostridium botulinum F str. Langeland 5404102 YP_001390790.1 CDS npr-2 NC_009699.1 1609854 1611632 R identified by match to protein family HMM PF01447; match to protein family HMM PF02868; match to protein family HMM PF03413; thermolysin metallopeptidase complement(1609854..1611632) Clostridium botulinum F str. Langeland 5402893 YP_001390791.1 CDS npr-3 NC_009699.1 1611748 1613541 R identified by match to protein family HMM PF01447; match to protein family HMM PF02868; match to protein family HMM PF03413; thermolysin metallopeptidase complement(1611748..1613541) Clostridium botulinum F str. Langeland 5403838 YP_001390792.1 CDS npr-4 NC_009699.1 1613657 1615441 R identified by match to protein family HMM PF01447; match to protein family HMM PF02868; match to protein family HMM PF03413; thermolysin metallopeptidase complement(1613657..1615441) Clostridium botulinum F str. Langeland 5405138 YP_001390793.1 CDS npr-5 NC_009699.1 1615561 1617306 R identified by match to protein family HMM PF01447; match to protein family HMM PF02868; match to protein family HMM PF03413; thermolysin metallopeptidase complement(1615561..1617306) Clostridium botulinum F str. Langeland 5402080 YP_001390794.1 CDS CLI_1530 NC_009699.1 1617427 1619166 R identified by match to protein family HMM PF01447; match to protein family HMM PF02868; match to protein family HMM PF03413; bacillolysin complement(1617427..1619166) Clostridium botulinum F str. Langeland 5404971 YP_001390795.1 CDS nadC NC_009699.1 1619771 1620607 R identified by match to protein family HMM PF01729; match to protein family HMM PF02749; match to protein family HMM TIGR00078; nicotinate-nucleotide pyrophosphorylase complement(1619771..1620607) Clostridium botulinum F str. Langeland 5403437 YP_001390796.1 CDS nadB NC_009699.1 1620588 1621889 R catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase complement(1620588..1621889) Clostridium botulinum F str. Langeland 5402776 YP_001390797.1 CDS nadA NC_009699.1 1621892 1622806 R 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase complement(1621892..1622806) Clostridium botulinum F str. Langeland 5401922 YP_001390798.1 CDS CLI_1534 NC_009699.1 1623174 1624100 D identified by Glimmer3; hypothetical protein 1623174..1624100 Clostridium botulinum F str. Langeland 5405458 YP_001390799.1 CDS hlyIII NC_009699.1 1624197 1624835 R identified by match to protein family HMM PF03006; match to protein family HMM TIGR01065; hemolysin III complement(1624197..1624835) Clostridium botulinum F str. Langeland 5402490 YP_001390800.1 CDS ychF NC_009699.1 1624956 1626053 R translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD complement(1624956..1626053) Clostridium botulinum F str. Langeland 5405201 YP_001390801.1 CDS mraZ NC_009699.1 1626746 1627216 D MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 1626746..1627216 Clostridium botulinum F str. Langeland 5404664 YP_001390802.1 CDS mraW NC_009699.1 1627296 1628225 D identified by match to protein family HMM PF01795; match to protein family HMM TIGR00006; S-adenosyl-methyltransferase MraW 1627296..1628225 Clostridium botulinum F str. Langeland 5405657 YP_001390803.1 CDS CLI_1539 NC_009699.1 1628307 1628810 D cell division protein FtsL 1628307..1628810 Clostridium botulinum F str. Langeland 5405409 YP_001390804.1 CDS CLI_1540 NC_009699.1 1628826 1631006 D identified by match to protein family HMM PF00905; match to protein family HMM PF03717; match to protein family HMM PF03793; match to protein family HMM TIGR02214; stage V sporulation protein D 1628826..1631006 Clostridium botulinum F str. Langeland 5402716 YP_001390805.1 CDS murE NC_009699.1 1631237 1632688 D involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 1631237..1632688 Clostridium botulinum F str. Langeland 5405478 YP_001390806.1 CDS murF NC_009699.1 1632714 1634102 D identified by match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01143; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 1632714..1634102 Clostridium botulinum F str. Langeland 5402396 YP_001390807.1 CDS mraY NC_009699.1 1634138 1635091 D First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 1634138..1635091 Clostridium botulinum F str. Langeland 5402598 YP_001390808.1 CDS CLI_1544 NC_009699.1 1635170 1636282 D identified by match to protein family HMM PF01098; match to protein family HMM TIGR02614; match to protein family HMM TIGR02615; cell cycle protein FtsW 1635170..1636282 Clostridium botulinum F str. Langeland 5402883 YP_001390809.1 CDS CLI_1545 NC_009699.1 1636601 1637371 D identified by match to protein family HMM PF08478; cell division protein FtsQ 1636601..1637371 Clostridium botulinum F str. Langeland 5402652 YP_001390810.1 CDS CLI_1546 NC_009699.1 1637382 1638095 D identified by match to protein family HMM PF05949; hypothetical protein 1637382..1638095 Clostridium botulinum F str. Langeland 5403744 YP_001390811.1 CDS sbp NC_009699.1 1638129 1638479 D identified by match to protein family HMM PF06947; small basic protein 1638129..1638479 Clostridium botulinum F str. Langeland 5405085 YP_001390812.1 CDS CLI_1548 NC_009699.1 1638480 1639211 D identified by match to protein family HMM PF05949; hypothetical protein 1638480..1639211 Clostridium botulinum F str. Langeland 5404554 YP_001390813.1 CDS CLI_1549 NC_009699.1 1639304 1639975 D identified by match to protein family HMM PF01168; match to protein family HMM TIGR00044; hypothetical protein 1639304..1639975 Clostridium botulinum F str. Langeland 5402543 YP_001390814.1 CDS CLI_1550 NC_009699.1 1639996 1640448 D identified by match to protein family HMM PF04472; hypothetical protein 1639996..1640448 Clostridium botulinum F str. Langeland 5402886 YP_001390815.1 CDS CLI_1551 NC_009699.1 1640465 1640740 D identified by match to protein family HMM PF02325; hypothetical protein 1640465..1640740 Clostridium botulinum F str. Langeland 5405404 YP_001390816.1 CDS CLI_1552 NC_009699.1 1640741 1641511 D hypothetical protein 1640741..1641511 Clostridium botulinum F str. Langeland 5404040 YP_001390817.1 CDS divIVA NC_009699.1 1641527 1642186 D identified by match to protein family HMM PF05103; cell-division initiation protein DivIVA 1641527..1642186 Clostridium botulinum F str. Langeland 5402978 YP_001390818.1 CDS aroB NC_009699.1 1642594 1643682 D identified by match to protein family HMM PF01761; match to protein family HMM TIGR01357; 3-dehydroquinate synthase 1642594..1643682 Clostridium botulinum F str. Langeland 5404643 YP_001390819.1 CDS mtnN NC_009699.1 1643683 1644375 D enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1643683..1644375 Clostridium botulinum F str. Langeland 5403891 YP_001390820.1 CDS aroF NC_009699.1 1644496 1645296 D catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; 3-deoxy-7-phosphoheptulonate synthase 1644496..1645296 Clostridium botulinum F str. Langeland 5405143 YP_001390821.1 CDS aroA NC_009699.1 1645463 1646791 D catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 1645463..1646791 Clostridium botulinum F str. Langeland 5404878 YP_001390822.1 CDS CLI_1558 NC_009699.1 1647008 1647631 D identified by match to protein family HMM PF01258; match to protein family HMM TIGR02890; RNA polymerase-binding protein DksA 1647008..1647631 Clostridium botulinum F str. Langeland 5402639 YP_001390823.1 CDS lspA NC_009699.1 1648038 1648481 D lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 1648038..1648481 Clostridium botulinum F str. Langeland 5403807 YP_001390824.1 CDS CLI_1560 NC_009699.1 1648485 1649402 D identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00005; RluA family pseudouridine synthase 1648485..1649402 Clostridium botulinum F str. Langeland 5403166 YP_001390825.1 CDS pyrR-1 NC_009699.1 1649899 1650435 D regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase 1649899..1650435 Clostridium botulinum F str. Langeland 5402495 YP_001390826.1 CDS CLI_1562 NC_009699.1 1650479 1651822 D identified by match to protein family HMM PF00860; match to protein family HMM TIGR00801; uracil permease 1650479..1651822 Clostridium botulinum F str. Langeland 5405490 YP_001390827.1 CDS xth NC_009699.1 1652411 1653172 D identified by match to protein family HMM PF03372; match to protein family HMM TIGR00195; match to protein family HMM TIGR00633; exodeoxyribonuclease III 1652411..1653172 Clostridium botulinum F str. Langeland 5404171 YP_001390828.1 CDS CLI_1564 NC_009699.1 1653396 1654538 D identified by match to protein family HMM PF01170; methyltransferase 1653396..1654538 Clostridium botulinum F str. Langeland 5404478 YP_001390829.1 CDS CLI_1565 NC_009699.1 1654769 1655314 D identified by Glimmer3; hypothetical protein 1654769..1655314 Clostridium botulinum F str. Langeland 5402384 YP_001390830.1 CDS modA NC_009699.1 1655492 1656307 D identified by match to protein family HMM PF01547; match to protein family HMM TIGR01256; molybdate ABC transporter periplasmic molybdate-binding protein 1655492..1656307 Clostridium botulinum F str. Langeland 5403234 YP_001390831.1 CDS modB NC_009699.1 1656317 1656988 D identified by match to protein family HMM PF00528; molybdate ABC transporter permease 1656317..1656988 Clostridium botulinum F str. Langeland 5402931 YP_001390832.1 CDS CLI_1568 NC_009699.1 1657368 1658039 D identified by match to protein family HMM PF00005; molybdate ABC transporter ATP-binding protein 1657368..1658039 Clostridium botulinum F str. Langeland 5402274 YP_001390833.1 CDS CLI_1569 NC_009699.1 1658093 1658662 D hypothetical protein 1658093..1658662 Clostridium botulinum F str. Langeland 5404542 YP_001390834.1 CDS CLI_1570 NC_009699.1 1659023 1659946 D identified by match to protein family HMM PF01734; patatin-like phospholipase family protein 1659023..1659946 Clostridium botulinum F str. Langeland 5402661 YP_001390835.1 CDS CLI_1571 NC_009699.1 1660247 1660402 D hypothetical protein 1660247..1660402 Clostridium botulinum F str. Langeland 5405498 YP_001390836.1 CDS CLI_1572 NC_009699.1 1660675 1661727 D identified by match to protein family HMM PF01208; methylcobalamin:coenzyme M methyltransferase 1660675..1661727 Clostridium botulinum F str. Langeland 5403694 YP_001390837.1 CDS CLI_1573 NC_009699.1 1661774 1663171 D identified by match to protein family HMM PF03553; Na+/H+ antiporter family protein 1661774..1663171 Clostridium botulinum F str. Langeland 5403165 YP_001390838.1 CDS CLI_1574 NC_009699.1 1663313 1665043 D identified by match to protein family HMM PF00111; (Fe-S)-binding protein 1663313..1665043 Clostridium botulinum F str. Langeland 5402009 YP_001390839.1 CDS CLI_1575 NC_009699.1 1665131 1666060 D identified by match to protein family HMM PF02492; CobW/P47K family protein 1665131..1666060 Clostridium botulinum F str. Langeland 5404568 YP_001390840.1 CDS CLI_1576 NC_009699.1 1666083 1666955 D methylcobalamin:coenzyme M methyltransferase 1666083..1666955 Clostridium botulinum F str. Langeland 5405407 YP_001390841.1 CDS mtbC NC_009699.1 1666981 1667643 D identified by match to protein family HMM PF02310; match to protein family HMM PF02607; match to protein family HMM TIGR02370; dimethylamine corrinoid protein 1666981..1667643 Clostridium botulinum F str. Langeland 5403289 YP_001390842.1 CDS CLI_1578 NC_009699.1 1667728 1668750 D catalyze the formation of methyl-coenzyme M from methylcobalamin and coenzyme M; methylcobalamin:coenzyme M methyltransferase 1667728..1668750 Clostridium botulinum F str. Langeland 5402022 YP_001390843.1 CDS CLI_1579 NC_009699.1 1669697 1670767 D identified by match to protein family HMM PF01208; methylcobalamin:coenzyme M methyltransferase 1669697..1670767 Clostridium botulinum F str. Langeland 5405298 YP_001390844.1 CDS CLI_1580 NC_009699.1 1670790 1671752 D identified by match to protein family HMM PF00005; methionine ABC transporter ATP-binding protein 1670790..1671752 Clostridium botulinum F str. Langeland 5403630 YP_001390845.1 CDS CLI_1581 NC_009699.1 1671754 1672410 D identified by match to protein family HMM PF00528; methionine ABC transporter permease 1671754..1672410 Clostridium botulinum F str. Langeland 5401945 YP_001390846.1 CDS CLI_1582 NC_009699.1 1672541 1673359 D identified by match to protein family HMM PF03180; NLPA family lipoprotein 1672541..1673359 Clostridium botulinum F str. Langeland 5403790 YP_001390847.1 CDS CLI_1583 NC_009699.1 1673450 1674019 R identified by match to protein family HMM PF02493; MORN repeat-containing protein complement(1673450..1674019) Clostridium botulinum F str. Langeland 5404809 YP_001390848.1 CDS CLI_1584 NC_009699.1 1674598 1675617 D identified by match to protein family HMM PF00724; FAD/FMN-binding oxidoreductase 1674598..1675617 Clostridium botulinum F str. Langeland 5404207 YP_001390849.1 CDS asnA NC_009699.1 1675945 1676967 D catalyzes the formation of asparagine from aspartate and ammonia; asparagine synthetase AsnA 1675945..1676967 Clostridium botulinum F str. Langeland 5403771 YP_001390850.1 CDS CLI_1586 NC_009699.1 1677075 1678640 R identified by match to protein family HMM PF00355; match to protein family HMM PF01266; oxidoreductase, FAD dependent complement(1677075..1678640) Clostridium botulinum F str. Langeland 5403457 YP_001390851.1 CDS CLI_1587 NC_009699.1 1678998 1680857 D identified by match to protein family HMM PF01131; match to protein family HMM PF01751; DNA topoisomerase 1678998..1680857 Clostridium botulinum F str. Langeland 5405220 YP_001390852.1 CDS CLI_1588 NC_009699.1 1680884 1682797 D identified by match to protein family HMM PF00488; MutS domain-containing protein 1680884..1682797 Clostridium botulinum F str. Langeland 5402772 YP_001390853.1 CDS CLI_1589 NC_009699.1 1683114 1684250 D identified by match to protein family HMM PF00037; match to protein family HMM PF00248; aldo/keto reductase 1683114..1684250 Clostridium botulinum F str. Langeland 5405321 YP_001390854.1 CDS CLI_1590 NC_009699.1 1684308 1684799 R identified by match to protein family HMM PF04073; hypothetical protein complement(1684308..1684799) Clostridium botulinum F str. Langeland 5404367 YP_001390855.1 CDS CLI_1591 NC_009699.1 1685036 1685734 D identified by match to protein family HMM PF00005; peptide ABC transporter ATP-binding protein 1685036..1685734 Clostridium botulinum F str. Langeland 5403964 YP_001390856.1 CDS CLI_1592 NC_009699.1 1685735 1687945 D identified by match to protein family HMM PF02687; efflux ABC transporter permease 1685735..1687945 Clostridium botulinum F str. Langeland 5403241 YP_001390857.1 CDS CLI_1593 NC_009699.1 1687957 1688580 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1687957..1688580 Clostridium botulinum F str. Langeland 5403127 YP_001390858.1 CDS CLI_1594 NC_009699.1 1688941 1689492 D hypothetical protein 1688941..1689492 Clostridium botulinum F str. Langeland 5402843 YP_001390859.1 CDS CLI_1595 NC_009699.1 1689505 1690602 D identified by match to protein family HMM PF00005; carbohydrate ABC transporter ATP-binding protein 1689505..1690602 Clostridium botulinum F str. Langeland 5404521 YP_001390860.1 CDS CLI_1596 NC_009699.1 1690595 1691488 D identified by match to protein family HMM PF00528; carbohydrate ABC transporter permease 1690595..1691488 Clostridium botulinum F str. Langeland 5405611 YP_001390861.1 CDS CLI_1597 NC_009699.1 1691524 1692348 D identified by match to protein family HMM PF00528; carbohydrate ABC transporter permease 1691524..1692348 Clostridium botulinum F str. Langeland 5405144 YP_001390862.1 CDS CLI_1598 NC_009699.1 1692394 1693755 D identified by match to protein family HMM PF01547; carbohydrate ABC transporter periplasmic-binding protein 1692394..1693755 Clostridium botulinum F str. Langeland 5402474 YP_001390863.1 CDS ldh NC_009699.1 1693979 1694935 R identified by match to protein family HMM PF00056; match to protein family HMM PF02866; match to protein family HMM TIGR01771; L-lactate dehydrogenase complement(1693979..1694935) Clostridium botulinum F str. Langeland 5403041 YP_001390864.1 CDS CLI_1600 NC_009699.1 1695457 1696167 D identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator 1695457..1696167 Clostridium botulinum F str. Langeland 5403507 YP_001390865.1 CDS CLI_1601 NC_009699.1 1696419 1696907 R identified by match to protein family HMM TIGR01909; redox family protein complement(1696419..1696907) Clostridium botulinum F str. Langeland 5403273 YP_001390866.1 CDS CLI_1602 NC_009699.1 1697141 1698088 D identified by match to protein family HMM PF03595; C4-dicarboxylate transporter/malic acid transport protein 1697141..1698088 Clostridium botulinum F str. Langeland 5404153 YP_001390867.1 CDS CLI_1603 NC_009699.1 1698160 1698321 R identified by Glimmer3; hypothetical protein complement(1698160..1698321) Clostridium botulinum F str. Langeland 5403374 YP_001390868.1 CDS CLI_1604 NC_009699.1 1698951 1701149 D identified by match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF01966; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254; sensory box-containing diguanylate cyclase 1698951..1701149 Clostridium botulinum F str. Langeland 5404556 YP_001390869.1 CDS CLI_1605 NC_009699.1 1701257 1701604 D identified by match to protein family HMM PF03860; hypothetical protein 1701257..1701604 Clostridium botulinum F str. Langeland 5403515 YP_001390870.1 CDS CLI_1606 NC_009699.1 1701972 1704044 D identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF02743; methyl-accepting chemotaxis protein 1701972..1704044 Clostridium botulinum F str. Langeland 5403569 YP_001390871.1 CDS CLI_1607 NC_009699.1 1704251 1704718 D identified by match to protein family HMM PF01047; MarR family transcriptional regulator 1704251..1704718 Clostridium botulinum F str. Langeland 5402124 YP_001390872.1 CDS CLI_1608 NC_009699.1 1704744 1705286 D hypothetical protein 1704744..1705286 Clostridium botulinum F str. Langeland 5405148 YP_001390873.1 CDS CLI_1609 NC_009699.1 1705435 1705788 R identified by match to protein family HMM PF01638; transcriptional regulator complement(1705435..1705788) Clostridium botulinum F str. Langeland 5404025 YP_001390874.1 CDS CLI_1610 NC_009699.1 1706183 1706548 D identified by match to protein family HMM PF00903; glyoxalase family protein 1706183..1706548 Clostridium botulinum F str. Langeland 5405364 YP_001390875.1 CDS ogt NC_009699.1 1706577 1707047 D Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) in DNA. Repairs alkylated guanine in DNA by stoichiometrically transferring the alkyl group at the O-6 position to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated; methylated-DNA--protein-cysteine methyltransferase 1706577..1707047 Clostridium botulinum F str. Langeland 5403665 YP_001390876.1 CDS CLI_1612 NC_009699.1 1707074 1708291 D identified by match to protein family HMM PF00165; AraC family transcriptional regulator 1707074..1708291 Clostridium botulinum F str. Langeland 5404506 YP_001390877.1 CDS CLI_1613 NC_009699.1 1708456 1709664 D identified by match to protein family HMM PF06792; hypothetical protein 1708456..1709664 Clostridium botulinum F str. Langeland 5404606 YP_001390878.1 CDS CLI_1614 NC_009699.1 1709689 1710519 D hypothetical protein 1709689..1710519 Clostridium botulinum F str. Langeland 5403106 YP_001390879.1 CDS CLI_1615 NC_009699.1 1710908 1712020 D identified by match to protein family HMM PF01381; DNA-binding protein 1710908..1712020 Clostridium botulinum F str. Langeland 5402284 YP_001390880.1 CDS CLI_1616 NC_009699.1 1712411 1714945 D identified by Glimmer3; hypothetical protein 1712411..1714945 Clostridium botulinum F str. Langeland 5405323 YP_001390881.1 CDS CLI_1617 NC_009699.1 1715002 1715871 D identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297; cation efflux family protein 1715002..1715871 Clostridium botulinum F str. Langeland 5404374 YP_001390882.1 CDS CLI_1618 NC_009699.1 1716357 1717760 D identified by match to protein family HMM PF00854; match to protein family HMM PF07690; match to protein family HMM TIGR00924; amino acid/peptide transporter 1716357..1717760 Clostridium botulinum F str. Langeland 5405172 YP_001390883.1 CDS CLI_1619 NC_009699.1 1718197 1718556 D identified by match to protein family HMM PF01325; match to protein family HMM PF02742; iron-dependent repressor 1718197..1718556 Clostridium botulinum F str. Langeland 5401997 YP_001390884.1 CDS CLI_1620 NC_009699.1 1718654 1719061 D hypothetical protein 1718654..1719061 Clostridium botulinum F str. Langeland 5402256 YP_001390885.1 CDS CLI_1621 NC_009699.1 1719442 1720296 D identified by match to protein family HMM PF01966; match to protein family HMM PF08668; match to protein family HMM TIGR00277; HDIG domain-containing protein 1719442..1720296 Clostridium botulinum F str. Langeland 5404715 YP_001390886.1 CDS CLI_1623 NC_009699.1 1720768 1723404 R identified by match to protein family HMM PF00122; match to protein family HMM PF00689; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494; cation-transporting ATPase, P-type complement(1720768..1723404) Clostridium botulinum F str. Langeland 5403780 YP_001390887.1 CDS CLI_1624 NC_009699.1 1724320 1724634 D identified by similarity to GB:ABJ57020.1; hypothetical protein 1724320..1724634 Clostridium botulinum F str. Langeland 5404362 YP_001390888.1 CDS CLI_1625 NC_009699.1 1724850 1725290 R identified by match to protein family HMM PF04657; hypothetical protein complement(1724850..1725290) Clostridium botulinum F str. Langeland 5404961 YP_001390889.1 CDS CLI_1626 NC_009699.1 1725304 1725729 R hypothetical protein complement(1725304..1725729) Clostridium botulinum F str. Langeland 5402482 YP_001390890.1 CDS CLI_1627 NC_009699.1 1725845 1726537 D identified by match to protein family HMM PF00027; cyclic nucleotide-binding domain-containing protein 1725845..1726537 Clostridium botulinum F str. Langeland 5402769 YP_001390891.1 CDS CLI_1628 NC_009699.1 1726657 1727595 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1726657..1727595 Clostridium botulinum F str. Langeland 5403176 YP_001390892.1 CDS CLI_1629 NC_009699.1 1727606 1728349 D identified by match to protein family HMM PF01061; ABC transporter permease 1727606..1728349 Clostridium botulinum F str. Langeland 5404900 YP_001390893.1 CDS CLI_1630 NC_009699.1 1728349 1729338 D identified by match to protein family HMM PF01061; ABC transporter permease 1728349..1729338 Clostridium botulinum F str. Langeland 5402687 YP_001390894.1 CDS CLI_1631 NC_009699.1 1729470 1732067 D identified by match to protein family HMM PF00196; LuxR family transcriptional regulator 1729470..1732067 Clostridium botulinum F str. Langeland 5403308 YP_001390895.1 CDS CLI_1632 NC_009699.1 1732147 1732869 R identified by match to protein family HMM PF06445; transcription activator effector binding domain-containing protein complement(1732147..1732869) Clostridium botulinum F str. Langeland 5404893 YP_001390896.1 CDS CLI_1633 NC_009699.1 1732927 1733871 R identified by match to protein family HMM PF08220; match to protein family HMM PF08279; hypothetical protein complement(1732927..1733871) Clostridium botulinum F str. Langeland 5402377 YP_001390897.1 CDS CLI_1634 NC_009699.1 1734495 1735490 D identified by match to protein family HMM PF06050; 2-hydroxyglutaryl-CoA dehydratase subunit 1734495..1735490 Clostridium botulinum F str. Langeland 5402851 YP_001390898.1 CDS hgdC-1 NC_009699.1 1735607 1736368 D identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241; 2-hydroxyglutaryl-CoA dehydratase subunit A 1735607..1736368 Clostridium botulinum F str. Langeland 5403497 YP_001390899.1 CDS CLI_1636 NC_009699.1 1736386 1736817 D identified by match to protein family HMM PF01242; match to protein family HMM TIGR03367; 6-pyruvoyl-tetrahydropterin synthase 1736386..1736817 Clostridium botulinum F str. Langeland 5402060 YP_001390900.1 CDS CLI_1637 NC_009699.1 1736819 1737484 D identified by match to protein family HMM PF04055; radical SAM domain-containing protein 1736819..1737484 Clostridium botulinum F str. Langeland 5405623 YP_001390901.1 CDS folE NC_009699.1 1737488 1738078 D involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 1737488..1738078 Clostridium botulinum F str. Langeland 5403525 YP_001390902.1 CDS CLI_1639 NC_009699.1 1738262 1738921 D identified by match to protein family HMM PF06508; match to protein family HMM TIGR00364; ExsB protein 1738262..1738921 Clostridium botulinum F str. Langeland 5402656 YP_001390903.1 CDS CLI_1640 NC_009699.1 1739215 1740033 D identified by match to protein family HMM PF02517; CAAX amino terminal protease family protein 1739215..1740033 Clostridium botulinum F str. Langeland 5403935 YP_001390904.1 CDS CLI_1641 NC_009699.1 1740182 1741138 D identified by match to protein family HMM PF00015; methyl-accepting chemotaxis protein 1740182..1741138 Clostridium botulinum F str. Langeland 5405128 YP_001390905.1 CDS CLI_1642 NC_009699.1 1741313 1742065 D identified by match to protein family HMM PF06161; hypothetical protein 1741313..1742065 Clostridium botulinum F str. Langeland 5403384 YP_001390906.1 CDS CLI_1643 NC_009699.1 1742386 1742802 D hypothetical protein 1742386..1742802 Clostridium botulinum F str. Langeland 5403337 YP_001390907.1 CDS CLI_1644 NC_009699.1 1742827 1743765 D identified by match to protein family HMM PF04198; deoxyribonucleoside regulator 1742827..1743765 Clostridium botulinum F str. Langeland 5403545 YP_001390908.1 CDS deoC NC_009699.1 1744057 1744695 D catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase 1744057..1744695 Clostridium botulinum F str. Langeland 5404638 YP_001390909.1 CDS rbsK NC_009699.1 1744883 1745794 D identified by match to protein family HMM PF00294; match to protein family HMM TIGR02152; ribokinase 1744883..1745794 Clostridium botulinum F str. Langeland 5402500 YP_001390910.1 CDS hisZ NC_009699.1 1746250 1747518 D May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase 1746250..1747518 Clostridium botulinum F str. Langeland 5401893 YP_001390911.1 CDS hisG NC_009699.1 1747543 1748181 D short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; ATP phosphoribosyltransferase 1747543..1748181 Clostridium botulinum F str. Langeland 5405208 YP_001390912.1 CDS hisD NC_009699.1 1748260 1749570 D catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 1748260..1749570 Clostridium botulinum F str. Langeland 5403268 YP_001390913.1 CDS hisB NC_009699.1 1749714 1750304 D catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase 1749714..1750304 Clostridium botulinum F str. Langeland 5401907 YP_001390914.1 CDS hisH NC_009699.1 1750432 1751037 D with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 1750432..1751037 Clostridium botulinum F str. Langeland 5403673 YP_001390915.1 CDS hisA NC_009699.1 1751034 1751762 D catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 1751034..1751762 Clostridium botulinum F str. Langeland 5402081 YP_001390916.1 CDS hisC NC_009699.1 1751759 1752823 D catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 1751759..1752823 Clostridium botulinum F str. Langeland 5403700 YP_001390917.1 CDS hisF NC_009699.1 1753009 1753770 D catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 1753009..1753770 Clostridium botulinum F str. Langeland 5403601 YP_001390918.1 CDS CLI_1656 NC_009699.1 1754845 1755540 D identified by match to protein family HMM PF04143; hypothetical protein 1754845..1755540 Clostridium botulinum F str. Langeland 5403953 YP_001390919.1 CDS CLI_1657 NC_009699.1 1755554 1755775 D identified by match to protein family HMM PF01206; hypothetical protein 1755554..1755775 Clostridium botulinum F str. Langeland 5402116 YP_001390920.1 CDS CLI_1658 NC_009699.1 1755793 1756320 D identified by match to protein family HMM PF04143; hypothetical protein 1755793..1756320 Clostridium botulinum F str. Langeland 5402517 YP_001390921.1 CDS CLI_1659 NC_009699.1 1756351 1757241 R identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator complement(1756351..1757241) Clostridium botulinum F str. Langeland 5402595 YP_001390922.1 CDS CLI_1660 NC_009699.1 1757505 1758755 D identified by match to protein family HMM PF01235; sodium:alanine symporter family protein 1757505..1758755 Clostridium botulinum F str. Langeland 5402020 YP_001390923.1 CDS CLI_1661 NC_009699.1 1758836 1760536 D identified by match to protein family HMM PF00070; match to protein family HMM PF00581; match to protein family HMM PF02852; match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase family protein 1758836..1760536 Clostridium botulinum F str. Langeland 5405473 YP_001390924.1 CDS CLI_1662 NC_009699.1 1760689 1761945 D identified by match to protein family HMM PF04143; hypothetical protein 1760689..1761945 Clostridium botulinum F str. Langeland 5403598 YP_001390925.1 CDS CLI_1663 NC_009699.1 1762252 1762959 D identified by match to protein family HMM PF00005; antibiotic ABC transporter ATP-binding protein 1762252..1762959 Clostridium botulinum F str. Langeland 5404732 YP_001390926.1 CDS CLI_1664 NC_009699.1 1762962 1763693 D antibiotic ABC transporter permease 1762962..1763693 Clostridium botulinum F str. Langeland 5404990 YP_001390927.1 CDS CLI_1665 NC_009699.1 1763864 1764439 D antibiotic ABC transporter permease 1763864..1764439 Clostridium botulinum F str. Langeland 5404815 YP_001390928.1 CDS CLI_1666 NC_009699.1 1764556 1765215 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; antibiotic transporter response regulator 1764556..1765215 Clostridium botulinum F str. Langeland 5403667 YP_001390929.1 CDS CLI_1667 NC_009699.1 1765206 1766585 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; antibiotic transporter sensor protein 1765206..1766585 Clostridium botulinum F str. Langeland 5404472 YP_001390930.1 CDS arcA-2 NC_009699.1 1767149 1768375 D identified by match to protein family HMM PF02274; match to protein family HMM TIGR01078; arginine deiminase 1767149..1768375 Clostridium botulinum F str. Langeland 5402497 YP_001390931.1 CDS arcD NC_009699.1 1768500 1769918 D identified by match to protein family HMM PF00324; arginine/ornithine antiporter 1768500..1769918 Clostridium botulinum F str. Langeland 5405373 YP_001390932.1 CDS CLI_1672 NC_009699.1 1771194 1771790 D identified by match to protein family HMM PF08876; hypothetical protein 1771194..1771790 Clostridium botulinum F str. Langeland 5403680 YP_001390933.1 CDS CLI_1673 NC_009699.1 1772158 1772718 D identified by match to protein family HMM PF01966; HD domain-containing protein 1772158..1772718 Clostridium botulinum F str. Langeland 5402452 YP_001390934.1 CDS CLI_1674 NC_009699.1 1772758 1772907 D identified by Glimmer3; hypothetical protein 1772758..1772907 Clostridium botulinum F str. Langeland 5401968 YP_001390935.1 CDS CLI_1675 NC_009699.1 1773232 1773570 R identified by Glimmer3; hypothetical protein complement(1773232..1773570) Clostridium botulinum F str. Langeland 5402271 YP_001390936.1 CDS CLI_1676 NC_009699.1 1773837 1777130 D identified by match to protein family HMM PF00176; match to protein family HMM PF00271; match to protein family HMM PF04434; match to protein family HMM PF04851; match to protein family HMM PF08455; SNF2 family helicase 1773837..1777130 Clostridium botulinum F str. Langeland 5402995 YP_001390937.1 CDS CLI_1677 NC_009699.1 1777320 1778141 D identified by match to protein family HMM PF04607; RelA/SpoT domain-containing protein 1777320..1778141 Clostridium botulinum F str. Langeland 5403450 YP_001390938.1 CDS CLI_1678 NC_009699.1 1778564 1779019 D hypothetical protein 1778564..1779019 Clostridium botulinum F str. Langeland 5405297 YP_001390939.1 CDS CLI_1679 NC_009699.1 1779266 1780255 D identified by match to protein family HMM PF00165; AraC family transcriptional regulator 1779266..1780255 Clostridium botulinum F str. Langeland 5403873 YP_001390940.1 CDS CLI_1680 NC_009699.1 1780403 1782157 D identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease 1780403..1782157 Clostridium botulinum F str. Langeland 5402933 YP_001390941.1 CDS CLI_1681 NC_009699.1 1782159 1783883 D identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM PF02463; ABC transporter ATP-binding protein/permease 1782159..1783883 Clostridium botulinum F str. Langeland 5405523 YP_001390942.1 CDS CLI_1682 NC_009699.1 1784275 1785276 D identified by match to protein family HMM PF00356; match to protein family HMM PF00532; LacI family transcriptional regulator 1784275..1785276 Clostridium botulinum F str. Langeland 5405465 YP_001390943.1 CDS CLI_1683 NC_009699.1 1785571 1786518 D identified by match to protein family HMM PF00480; glucokinase 1785571..1786518 Clostridium botulinum F str. Langeland 5403622 YP_001390944.1 CDS CLI_1684 NC_009699.1 1786766 1788430 D identified by match to protein family HMM PF00128; glycosyl hydrolase family protein 1786766..1788430 Clostridium botulinum F str. Langeland 5404929 YP_001390945.1 CDS CLI_1685 NC_009699.1 1788472 1790130 D identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826; match to protein family HMM TIGR02003; PTS system glucose/glucoside family transporter subunit IIBC 1788472..1790130 Clostridium botulinum F str. Langeland 5404701 YP_001390946.1 CDS CLI_1686 NC_009699.1 1790134 1790925 D identified by match to protein family HMM PF03372; endonuclease/exonuclease/phosphatase family protein 1790134..1790925 Clostridium botulinum F str. Langeland 5404610 YP_001390947.1 CDS CLI_1687 NC_009699.1 1791150 1791773 D identified by match to protein family HMM TIGR02840; hypothetical protein 1791150..1791773 Clostridium botulinum F str. Langeland 5405376 YP_001390948.1 CDS CLI_1688 NC_009699.1 1792062 1792397 R hypothetical protein complement(1792062..1792397) Clostridium botulinum F str. Langeland 5402925 YP_001390949.1 CDS CLI_1689 NC_009699.1 1792725 1794512 D hypothetical protein 1792725..1794512 Clostridium botulinum F str. Langeland 5404258 YP_001390950.1 CDS CLI_1690 NC_009699.1 1794671 1795126 D hypothetical protein 1794671..1795126 Clostridium botulinum F str. Langeland 5404858 YP_001390951.1 CDS CLI_1691 NC_009699.1 1795422 1797527 R identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase complement(1795422..1797527) Clostridium botulinum F str. Langeland 5402014 YP_001390952.1 CDS CLI_1692 NC_009699.1 1797565 1798257 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator complement(1797565..1798257) Clostridium botulinum F str. Langeland 5402174 YP_001390953.1 CDS CLI_1693 NC_009699.1 1798838 1800064 D identified by match to protein family HMM PF07690; major facilitator family transporter 1798838..1800064 Clostridium botulinum F str. Langeland 5405149 YP_001390954.1 CDS CLI_1694 NC_009699.1 1800619 1801476 R identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM PF08282; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; HAD family hydrolase complement(1800619..1801476) Clostridium botulinum F str. Langeland 5405608 YP_001390955.1 CDS CLI_1695 NC_009699.1 1801488 1802255 R identified by match to protein family HMM PF00455; match to protein family HMM PF08220; match to protein family HMM PF08279; DeoR family transcriptional regulator complement(1801488..1802255) Clostridium botulinum F str. Langeland 5402463 YP_001390956.1 CDS CLI_1696 NC_009699.1 1802788 1803318 D identified by match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; RNA polymerase sigma factor 1802788..1803318 Clostridium botulinum F str. Langeland 5403226 YP_001390957.1 CDS CLI_1697 NC_009699.1 1803508 1803687 D hypothetical protein 1803508..1803687 Clostridium botulinum F str. Langeland 5403281 YP_001390958.1 CDS CLI_1698 NC_009699.1 1803983 1807612 R identified by match to protein family HMM PF00801; match to protein family HMM PF01752; match to protein family HMM PF04151; match to protein family HMM PF08453; collagenase complement(1803983..1807612) Clostridium botulinum F str. Langeland 5404121 YP_001390959.1 CDS metF NC_009699.1 1808082 1808969 D identified by match to protein family HMM PF02219; match to protein family HMM TIGR00676; 5,10-methylenetetrahydrofolate reductase 1808082..1808969 Clostridium botulinum F str. Langeland 5405106 YP_001390960.1 CDS CLI_1700 NC_009699.1 1809145 1809825 D identified by match to protein family HMM PF02965; hypothetical protein 1809145..1809825 Clostridium botulinum F str. Langeland 5404110 YP_001390961.1 CDS CLI_1701 NC_009699.1 1809815 1812193 D identified by match to protein family HMM PF00809; match to protein family HMM PF02310; match to protein family HMM PF02574; match to protein family HMM PF02607; 5-methyltetrahydrofolate--homocysteine methyltransferase 1809815..1812193 Clostridium botulinum F str. Langeland 5403405 YP_001390962.1 CDS CLI_1702 NC_009699.1 1812440 1812859 R hypothetical protein complement(1812440..1812859) Clostridium botulinum F str. Langeland 5403948 YP_001390963.1 CDS CLI_1703 NC_009699.1 1813369 1813941 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 1813369..1813941 Clostridium botulinum F str. Langeland 5405036 YP_001390964.1 CDS CLI_1704 NC_009699.1 1813934 1815415 D hypothetical protein 1813934..1815415 Clostridium botulinum F str. Langeland 5404453 YP_001390965.1 CDS acoR NC_009699.1 1815765 1817717 D identified by match to protein family HMM PF00158; match to protein family HMM PF01590; match to protein family HMM PF02954; aco operon transcriptional regulator 1815765..1817717 Clostridium botulinum F str. Langeland 5405002 YP_001390966.1 CDS CLI_1706 NC_009699.1 1817886 1818257 D identified by match to protein family HMM TIGR02058; hypothetical protein 1817886..1818257 Clostridium botulinum F str. Langeland 5405582 YP_001390967.1 CDS acoA NC_009699.1 1818278 1819261 D identified by match to protein family HMM PF00676; TPP-dependent acetoin dehydrogenase complex, E1 component subunit alpha 1818278..1819261 Clostridium botulinum F str. Langeland 5405250 YP_001390968.1 CDS acoB NC_009699.1 1819264 1820235 D identified by match to protein family HMM PF02779; match to protein family HMM PF02780; TPP-dependent acetoin dehydrogenase complex, E1 component subunit beta 1819264..1820235 Clostridium botulinum F str. Langeland 5404074 YP_001390969.1 CDS acoX NC_009699.1 1820288 1821283 D identified by match to protein family HMM PF01513; acetoin catabolism protein X 1820288..1821283 Clostridium botulinum F str. Langeland 5402568 YP_001390970.1 CDS acoC NC_009699.1 1821319 1822629 D identified by match to protein family HMM PF00198; match to protein family HMM PF00364; match to protein family HMM PF02817; TPP-dependent acetoin dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase 1821319..1822629 Clostridium botulinum F str. Langeland 5403549 YP_001390971.1 CDS acoL NC_009699.1 1822642 1824033 D identified by match to protein family HMM PF00070; match to protein family HMM PF01134; match to protein family HMM PF02852; match to protein family HMM PF07992; match to protein family HMM TIGR01350; TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase 1822642..1824033 Clostridium botulinum F str. Langeland 5402561 YP_001390972.1 CDS CLI_1712 NC_009699.1 1824058 1825053 D identified by match to protein family HMM PF03099; match to protein family HMM TIGR00545; lipoate-protein ligase A 1824058..1825053 Clostridium botulinum F str. Langeland 5405034 YP_001390973.1 CDS CLI_1713 NC_009699.1 1825441 1826586 D identified by match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186; glycine betaine/L-proline ABC transporter ATP-binding protein 1825441..1826586 Clostridium botulinum F str. Langeland 5403317 YP_001390974.1 CDS CLI_1714 NC_009699.1 1826579 1828162 D identified by match to protein family HMM PF00528; match to protein family HMM PF04069; glycine betaine/proline ABC transporter permease/substrate-binding protein 1826579..1828162 Clostridium botulinum F str. Langeland 5405240 YP_001390975.1 CDS thrC NC_009699.1 1828456 1829937 D catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 1828456..1829937 Clostridium botulinum F str. Langeland 5404266 YP_001390976.1 CDS thrB NC_009699.1 1829947 1830840 D catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase 1829947..1830840 Clostridium botulinum F str. Langeland 5402899 YP_001390977.1 CDS CLI_1717 NC_009699.1 1830967 1832286 D catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; lysine and threonine sensitive; aspartate kinase 1830967..1832286 Clostridium botulinum F str. Langeland 5403138 YP_001390978.1 CDS hom-1 NC_009699.1 1832509 1833786 D catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 1832509..1833786 Clostridium botulinum F str. Langeland 5403608 YP_001390979.1 CDS CLI_1719 NC_009699.1 1834443 1836353 D identified by match to protein family HMM PF00158; match to protein family HMM PF01590; match to protein family HMM PF02954; match to protein family HMM TIGR00229; sensory box sigma-54 dependent transcriptional regulator 1834443..1836353 Clostridium botulinum F str. Langeland 5403314 YP_001390980.1 CDS CLI_1720 NC_009699.1 1836863 1838029 D identified by match to protein family HMM PF00465; NADH-dependent butanol dehydrogenase 1836863..1838029 Clostridium botulinum F str. Langeland 5402315 YP_001390981.1 CDS CLI_1721 NC_009699.1 1838358 1839245 D identified by match to protein family HMM PF00175; match to protein family HMM PF00970; ferredoxin-NADP(+) reductase subunit alpha 1838358..1839245 Clostridium botulinum F str. Langeland 5404086 YP_001390982.1 CDS gltA-1 NC_009699.1 1839245 1840627 D function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain; oxidoreductase 1839245..1840627 Clostridium botulinum F str. Langeland 5401865 YP_001390983.1 CDS CLI_1723 NC_009699.1 1840856 1842787 D identified by match to protein family HMM PF00158; match to protein family HMM PF01590; match to protein family HMM PF02954; match to protein family HMM PF07728; signal-transduction and transcriptional-control protein 1840856..1842787 Clostridium botulinum F str. Langeland 5404724 YP_001390984.1 CDS CLI_1724 NC_009699.1 1843216 1843917 D identified by match to protein family HMM PF00805; pentapeptide repeat-containing protein 1843216..1843917 Clostridium botulinum F str. Langeland 5403260 YP_001390985.1 CDS CLI_1725 NC_009699.1 1844340 1845698 D identified by match to protein family HMM PF02368; cell adhesion domain-containing protein 1844340..1845698 Clostridium botulinum F str. Langeland 5404314 YP_001390986.1 CDS CLI_1726 NC_009699.1 1845792 1846010 D identified by Glimmer3; hypothetical protein 1845792..1846010 Clostridium botulinum F str. Langeland 5403572 YP_001390987.1 CDS CLI_1727 NC_009699.1 1846190 1846411 D lipoprotein 1846190..1846411 Clostridium botulinum F str. Langeland 5403895 YP_001390988.1 CDS CLI_1728 NC_009699.1 1846767 1846928 D hypothetical protein 1846767..1846928 Clostridium botulinum F str. Langeland 5405601 YP_001390989.1 CDS CLI_1729 NC_009699.1 1847000 1847149 D identified by Glimmer3; hypothetical protein 1847000..1847149 Clostridium botulinum F str. Langeland 5402640 YP_001390990.1 CDS CLI_1730 NC_009699.1 1847212 1847679 D identified by match to protein family HMM PF01471; peptidoglycan-binding protein 1847212..1847679 Clostridium botulinum F str. Langeland 5404460 YP_001390991.1 CDS CLI_1731 NC_009699.1 1848504 1848731 D identified by Glimmer3; hypothetical protein 1848504..1848731 Clostridium botulinum F str. Langeland 5402690 YP_001390992.1 CDS CLI_1732 NC_009699.1 1849472 1850104 D hypothetical protein 1849472..1850104 Clostridium botulinum F str. Langeland 5402834 YP_001390993.1 CDS CLI_1733 NC_009699.1 1850137 1850691 D identified by match to protein family HMM PF01814; hypothetical protein 1850137..1850691 Clostridium botulinum F str. Langeland 5402554 YP_001390994.1 CDS alr NC_009699.1 1851142 1852311 D converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase 1851142..1852311 Clostridium botulinum F str. Langeland 5404073 YP_001390995.1 CDS CLI_1735 NC_009699.1 1852737 1854209 D identified by match to protein family HMM PF00015; methyl-accepting chemotaxis protein 1852737..1854209 Clostridium botulinum F str. Langeland 5404072 YP_001390996.1 CDS CLI_1736 NC_009699.1 1854297 1855637 D identified by match to protein family HMM PF00860; match to protein family HMM PF00916; xanthine/uracil permease family protein 1854297..1855637 Clostridium botulinum F str. Langeland 5402086 YP_001390997.1 CDS CLI_1737 NC_009699.1 1855875 1856708 D identified by match to protein family HMM PF06161; hypothetical protein 1855875..1856708 Clostridium botulinum F str. Langeland 5405500 YP_001390998.1 CDS CLI_1738 NC_009699.1 1856925 1857809 R identified by match to protein family HMM PF00106; short chain dehydrogenase/reductase family oxidoreductase complement(1856925..1857809) Clostridium botulinum F str. Langeland 5403689 YP_001390999.1 CDS CLI_1739 NC_009699.1 1858301 1860307 D identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF02743; methyl-accepting chemotaxis protein 1858301..1860307 Clostridium botulinum F str. Langeland 5403636 YP_001391000.1 CDS CLI_1740 NC_009699.1 1861216 1862229 D identified by match to protein family HMM PF07656; hypothetical protein 1861216..1862229 Clostridium botulinum F str. Langeland 5403028 YP_001391001.1 CDS CLI_1741 NC_009699.1 1862382 1862933 R hypothetical protein complement(1862382..1862933) Clostridium botulinum F str. Langeland 5403908 YP_001391002.1 CDS CLI_1742 NC_009699.1 1863293 1866526 D identified by match to protein family HMM PF00176; match to protein family HMM PF00271; match to protein family HMM PF04434; match to protein family HMM PF08455; Snf2/Rad54 family helicase 1863293..1866526 Clostridium botulinum F str. Langeland 5403107 YP_001391003.1 CDS CLI_1743 NC_009699.1 1866582 1866704 R hypothetical protein complement(1866582..1866704) Clostridium botulinum F str. Langeland 5405268 YP_001391004.2 CDS CLI_1744 NC_009699.1 1866741 1868099 R identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; drug resistance MFS transporter complement(1866741..1868099) Clostridium botulinum F str. Langeland 5403490 YP_001391005.1 CDS CLI_1745 NC_009699.1 1868473 1869135 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1868473..1869135 Clostridium botulinum F str. Langeland 5403019 YP_001391006.1 CDS CLI_1746 NC_009699.1 1869173 1869709 D identified by Glimmer3; hypothetical protein 1869173..1869709 Clostridium botulinum F str. Langeland 5404965 YP_001391007.1 CDS CLI_1747 NC_009699.1 1869737 1870120 D identified by Glimmer3; hypothetical protein 1869737..1870120 Clostridium botulinum F str. Langeland 5404311 YP_001391008.1 CDS CLI_1748 NC_009699.1 1870156 1870302 D identified by Glimmer3; hypothetical protein 1870156..1870302 Clostridium botulinum F str. Langeland 5402475 YP_001391009.1 CDS CLI_1749 NC_009699.1 1870354 1870497 D identified by Glimmer3; hypothetical protein 1870354..1870497 Clostridium botulinum F str. Langeland 5403484 YP_001391010.1 CDS CLI_1750 NC_009699.1 1870908 1871216 D identified by Glimmer3; hypothetical protein 1870908..1871216 Clostridium botulinum F str. Langeland 5405371 YP_001391011.1 CDS CLI_1751 NC_009699.1 1871578 1872165 R identified by match to protein family HMM PF00929; DNA polymerase III subunit epsilon complement(1871578..1872165) Clostridium botulinum F str. Langeland 5402175 YP_001391012.1 CDS CLI_1752 NC_009699.1 1872460 1873410 D identified by match to protein family HMM PF06207; hypothetical protein 1872460..1873410 Clostridium botulinum F str. Langeland 5404717 YP_001391013.1 CDS CLI_1753 NC_009699.1 1873681 1874316 D identified by match to protein family HMM PF01209; match to protein family HMM PF08241; match to protein family HMM PF08242; UbiE/COQ5 family methlytransferase 1873681..1874316 Clostridium botulinum F str. Langeland 5405198 YP_001391014.1 CDS CLI_1754 NC_009699.1 1874410 1874622 R heat shock protein, molecular chaperone complement(1874410..1874622) Clostridium botulinum F str. Langeland 5402126 YP_001391015.1 CDS CLI_1755 NC_009699.1 1874971 1876155 D identified by match to protein family HMM PF07690; major facilitator family protein 1874971..1876155 Clostridium botulinum F str. Langeland 5404388 YP_001391016.1 CDS CLI_1756 NC_009699.1 1876306 1876869 D identified by match to protein family HMM PF00440; hypothetical protein 1876306..1876869 Clostridium botulinum F str. Langeland 5402947 YP_001391017.1 CDS CLI_1757 NC_009699.1 1876862 1877044 D identified by similarity to GB:BAB80292.1; hypothetical protein 1876862..1877044 Clostridium botulinum F str. Langeland 5405644 YP_001391018.1 CDS fruK NC_009699.1 1877070 1877975 D identified by match to protein family HMM PF00294; match to protein family HMM TIGR03168; fructose-1-phosphate kinase 1877070..1877975 Clostridium botulinum F str. Langeland 5402988 YP_001391019.1 CDS CLI_1759 NC_009699.1 1878092 1879471 R identified by match to protein family HMM PF00854; match to protein family HMM PF07690; match to protein family HMM TIGR00924; amino acid/peptide transporter complement(1878092..1879471) Clostridium botulinum F str. Langeland 5405024 YP_001391020.1 CDS CLI_1760 NC_009699.1 1880048 1880203 D identified by Glimmer3; hypothetical protein 1880048..1880203 Clostridium botulinum F str. Langeland 5404476 YP_001391021.1 CDS CLI_1761 NC_009699.1 1880355 1881329 D hypothetical protein 1880355..1881329 Clostridium botulinum F str. Langeland 5403394 YP_001391022.1 CDS CLI_1762 NC_009699.1 1881615 1882148 R hypothetical protein complement(1881615..1882148) Clostridium botulinum F str. Langeland 5405484 YP_001391023.1 CDS CLI_1763 NC_009699.1 1882411 1882566 D identified by Glimmer3; hypothetical protein 1882411..1882566 Clostridium botulinum F str. Langeland 5403235 YP_001391024.1 CDS CLI_1764 NC_009699.1 1882603 1883562 D identified by match to protein family HMM PF00294; match to protein family HMM PF08543; PfkB family kinase 1882603..1883562 Clostridium botulinum F str. Langeland 5403760 YP_001391025.1 CDS safA NC_009699.1 1883709 1884344 R identified by match to protein family HMM PF00188; match to protein family HMM PF01476; spore coat assembly protein SafA complement(1883709..1884344) Clostridium botulinum F str. Langeland 5404281 YP_001391026.1 CDS CLI_1766 NC_009699.1 1884746 1885165 R identified by Glimmer3; hypothetical protein complement(1884746..1885165) Clostridium botulinum F str. Langeland 5404513 YP_001391027.1 CDS CLI_1767 NC_009699.1 1885512 1885721 D identified by match to protein family HMM PF00313; cold shock protein 1885512..1885721 Clostridium botulinum F str. Langeland 5403218 YP_001391028.1 CDS CLI_1768 NC_009699.1 1886090 1888093 D identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF02743; methyl-accepting chemotaxis protein 1886090..1888093 Clostridium botulinum F str. Langeland 5404539 YP_001391029.1 CDS CLI_1769 NC_009699.1 1888374 1889954 R identified by match to protein family HMM PF00005; drug resistance ABC transporter ATP-binding protein complement(1888374..1889954) Clostridium botulinum F str. Langeland 5402912 YP_001391030.1 CDS CLI_1770 NC_009699.1 1890243 1890734 D identified by match to protein family HMM PF04073; YbaK/prolyl-tRNA synthetase domain-containing protein 1890243..1890734 Clostridium botulinum F str. Langeland 5403097 YP_001391031.1 CDS CLI_1771 NC_009699.1 1891305 1892159 D identified by match to protein family HMM PF00037; match to protein family HMM PF01077; match to protein family HMM PF03460; sulfite/nitrite reductase family protein 1891305..1892159 Clostridium botulinum F str. Langeland 5404446 YP_001391032.1 CDS cheV NC_009699.1 1892360 1893253 R identified by match to protein family HMM PF00072; match to protein family HMM PF01584; chemotaxis protein CheV complement(1892360..1893253) Clostridium botulinum F str. Langeland 5403508 YP_001391033.1 CDS CLI_1773 NC_009699.1 1893622 1894887 D identified by match to protein family HMM PF00270; match to protein family HMM PF00271; DEAD/DEAH box helicase 1893622..1894887 Clostridium botulinum F str. Langeland 5404340 YP_001391034.1 CDS CLI_1774 NC_009699.1 1895210 1896046 D identified by match to protein family HMM PF00575; RNA-binding protein 1895210..1896046 Clostridium botulinum F str. Langeland 5403901 YP_001391035.1 CDS deaD NC_009699.1 1896225 1897670 D identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF03880; ATP-dependent RNA helicase DeaD 1896225..1897670 Clostridium botulinum F str. Langeland 5402853 YP_001391036.1 CDS CLI_1776 NC_009699.1 1897827 1902284 D identified by Glimmer3; hypothetical protein 1897827..1902284 Clostridium botulinum F str. Langeland 5401881 YP_001391037.1 CDS CLI_1777 NC_009699.1 1902679 1906758 D identified by match to protein family HMM PF00560; match to protein family HMM PF07532; hypothetical protein 1902679..1906758 Clostridium botulinum F str. Langeland 5402653 YP_001391038.1 CDS CLI_1778 NC_009699.1 1907163 1908092 D identified by match to protein family HMM PF01832; mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase domain-containing protein 1907163..1908092 Clostridium botulinum F str. Langeland 5404206 YP_001391039.1 CDS CLI_1779 NC_009699.1 1908218 1908733 R identified by match to protein family HMM PF00210; ferritin family protein complement(1908218..1908733) Clostridium botulinum F str. Langeland 5403767 YP_001391040.1 CDS CLI_1780 NC_009699.1 1908895 1909077 D identified by Glimmer3; hypothetical protein 1908895..1909077 Clostridium botulinum F str. Langeland 5402157 YP_001391041.1 CDS CLI_1781 NC_009699.1 1909138 1909992 D identified by match to protein family HMM PF00072; match to protein family HMM PF04509; chemotaxis response regulator/CheC-like domain-containing protein 1909138..1909992 Clostridium botulinum F str. Langeland 5404175 YP_001391042.1 CDS cheX NC_009699.1 1909992 1910453 D identified by match to protein family HMM PF04509; chemotaxis protein CheX 1909992..1910453 Clostridium botulinum F str. Langeland 5404096 YP_001391043.1 CDS CLI_1783 NC_009699.1 1910636 1911994 R identified by match to protein family HMM PF07670; hypothetical protein complement(1910636..1911994) Clostridium botulinum F str. Langeland 5404829 YP_001391044.1 CDS CLI_1784 NC_009699.1 1912733 1912936 D identified by match to protein family HMM PF00269; small, acid-soluble spore protein alpha 1912733..1912936 Clostridium botulinum F str. Langeland 5403974 YP_001391045.1 CDS CLI_1785 NC_009699.1 1912997 1913197 D identified by match to protein family HMM PF00269; small, acid-soluble spore protein beta 1912997..1913197 Clostridium botulinum F str. Langeland 5403501 YP_001391046.1 CDS CLI_1786 NC_009699.1 1913397 1913726 R Selenoprotein. identified by similarity to GB:AAO35429.1; match to protein family HMM TIGR01911; hypothetical protein complement(1913397..1913726) Clostridium botulinum F str. Langeland 5404746 YP_001391047.1 CDS xerC NC_009699.1 1914643 1915623 D site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 1914643..1915623 Clostridium botulinum F str. Langeland 5405600 YP_001391048.1 CDS CLI_1788 NC_009699.1 1915945 1916418 R hypothetical protein complement(1915945..1916418) Clostridium botulinum F str. Langeland 5405294 YP_001391049.1 CDS lexA NC_009699.1 1916716 1917321 D Represses a number of genes involved in the response to DNA damage; LexA repressor 1916716..1917321 Clostridium botulinum F str. Langeland 5404541 YP_001391050.1 CDS CLI_1790 NC_009699.1 1917518 1918801 R identified by match to protein family HMM PF06838; aluminum resistance protein complement(1917518..1918801) Clostridium botulinum F str. Langeland 5402684 YP_001391051.1 CDS CLI_1791 NC_009699.1 1918761 1918877 R identified by Glimmer3; hypothetical protein complement(1918761..1918877) Clostridium botulinum F str. Langeland 5404662 YP_001391052.1 CDS hfq NC_009699.1 1918902 1919159 R identified by match to protein family HMM PF01423; match to protein family HMM TIGR02383; RNA chaperone Hfq complement(1918902..1919159) Clostridium botulinum F str. Langeland 5402285 YP_001391053.1 CDS miaA NC_009699.1 1919245 1920180 R IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase complement(1919245..1920180) Clostridium botulinum F str. Langeland 5405421 YP_001391054.1 CDS mutL NC_009699.1 1920196 1922196 R This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein complement(1920196..1922196) Clostridium botulinum F str. Langeland 5402566 YP_001391055.1 CDS mutS NC_009699.1 1922342 1925140 R This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS complement(1922342..1925140) Clostridium botulinum F str. Langeland 5404332 YP_001391056.1 CDS miaB NC_009699.1 1925220 1926572 R catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase complement(1925220..1926572) Clostridium botulinum F str. Langeland 5404200 YP_001391057.1 CDS CLI_1797 NC_009699.1 1927044 1928234 D identified by match to protein family HMM PF00155; aminotransferase, classes I and II 1927044..1928234 Clostridium botulinum F str. Langeland 5405463 YP_001391058.1 CDS CLI_1798 NC_009699.1 1928319 1928480 D identified by similarity to GB:ABK61786.1; hypothetical protein 1928319..1928480 Clostridium botulinum F str. Langeland 5404394 YP_001391059.1 CDS aspB-1 NC_009699.1 1928535 1929725 D catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 1928535..1929725 Clostridium botulinum F str. Langeland 5404720 YP_001391060.1 CDS CLI_1800 NC_009699.1 1929756 1930622 R identified by match to protein family HMM PF00583; acetyltransferase complement(1929756..1930622) Clostridium botulinum F str. Langeland 5402421 YP_001391061.1 CDS CLI_1801 NC_009699.1 1930704 1931762 R identified by match to protein family HMM TIGR02906; spore coat protein complement(1930704..1931762) Clostridium botulinum F str. Langeland 5405157 YP_001391062.1 CDS CLI_1802 NC_009699.1 1932010 1933926 R these proteins appear to have resulted from a fusion of lytB and rpsA; catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase complement(1932010..1933926) Clostridium botulinum F str. Langeland 5403839 YP_001391063.1 CDS cmk NC_009699.1 1933991 1934644 R Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase complement(1933991..1934644) Clostridium botulinum F str. Langeland 5403287 YP_001391064.1 CDS aroH NC_009699.1 1934720 1935091 R identified by match to protein family HMM PF07736; match to protein family HMM TIGR01796; chorismate mutase complement(1934720..1935091) Clostridium botulinum F str. Langeland 5402813 YP_001391065.1 CDS CLI_1805 NC_009699.1 1935091 1936314 R identified by match to protein family HMM PF00070; match to protein family HMM PF01266; match to protein family HMM PF03486; match to protein family HMM PF07992; match to protein family HMM TIGR00275; pyridine nucleotide-disulfide oxidoreductase family protein complement(1935091..1936314) Clostridium botulinum F str. Langeland 5402822 YP_001391066.1 CDS gluD NC_009699.1 1936608 1937873 R identified by match to protein family HMM PF00208; match to protein family HMM PF02812; glutamate dehydrogenase complement(1936608..1937873) Clostridium botulinum F str. Langeland 5402033 YP_001391067.1 CDS CLI_1807 NC_009699.1 1938108 1938992 R identified by match to protein family HMM PF01380; match to protein family HMM PF01418; RpiR family transcriptional regulator complement(1938108..1938992) Clostridium botulinum F str. Langeland 5404654 YP_001391068.1 CDS rluB NC_009699.1 1939374 1940084 R identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; ribosomal large subunit pseudouridine synthase B complement(1939374..1940084) Clostridium botulinum F str. Langeland 5404454 YP_001391069.1 CDS CLI_1809 NC_009699.1 1940302 1941591 R hypothetical protein complement(1940302..1941591) Clostridium botulinum F str. Langeland 5403173 YP_001391070.1 CDS CLI_1810 NC_009699.1 1941689 1942969 R identified by match to protein family HMM PF06354; hypothetical protein complement(1941689..1942969) Clostridium botulinum F str. Langeland 5402454 YP_001391071.1 CDS CLI_1811 NC_009699.1 1943265 1944668 R identified by match to protein family HMM PF00535; glycosyl transferase family protein complement(1943265..1944668) Clostridium botulinum F str. Langeland 5404696 YP_001391072.1 CDS CLI_1812 NC_009699.1 1945038 1945229 D identified by Glimmer3; hypothetical protein 1945038..1945229 Clostridium botulinum F str. Langeland 5403571 YP_001391073.1 CDS CLI_1813 NC_009699.1 1945618 1947639 D identified by match to protein family HMM PF00015; match to protein family HMM PF00672; methyl-accepting chemotaxis protein 1945618..1947639 Clostridium botulinum F str. Langeland 5404348 YP_001391074.1 CDS CLI_1814 NC_009699.1 1947683 1948369 R identified by match to protein family HMM PF02683; cytochrome c-type biogenesis protein complement(1947683..1948369) Clostridium botulinum F str. Langeland 5403469 YP_001391075.1 CDS CLI_1815 NC_009699.1 1948371 1948802 R identified by match to protein family HMM PF00085; thioredoxin family protein complement(1948371..1948802) Clostridium botulinum F str. Langeland 5402850 YP_001391076.1 CDS CLI_1816 NC_009699.1 1948917 1949753 R identified by match to protein family HMM PF00795; carbon-nitrogen family hydrolase complement(1948917..1949753) Clostridium botulinum F str. Langeland 5402427 YP_001391077.1 CDS CLI_1817 NC_009699.1 1949884 1950438 R identified by Glimmer3; hypothetical protein complement(1949884..1950438) Clostridium botulinum F str. Langeland 5404423 YP_001391078.1 CDS CLI_1818 NC_009699.1 1950850 1952283 D identified by match to protein family HMM PF00999; match to protein family HMM PF02080; monovalent cation:proton antiporter-2 (CPA2) family protein 1950850..1952283 Clostridium botulinum F str. Langeland 5405424 YP_001391079.1 CDS pcaC-1 NC_009699.1 1952408 1952752 R identified by match to protein family HMM PF02627; match to protein family HMM TIGR00778; 4-carboxymuconolactone decarboxylase complement(1952408..1952752) Clostridium botulinum F str. Langeland 5403232 YP_001391080.1 CDS CLI_1820 NC_009699.1 1952890 1953405 R identified by match to protein family HMM PF00583; acetyltransferase complement(1952890..1953405) Clostridium botulinum F str. Langeland 5401926 YP_001391081.1 CDS CLI_1821 NC_009699.1 1953590 1954084 R lipoprotein complement(1953590..1954084) Clostridium botulinum F str. Langeland 5401979 YP_001391082.1 CDS CLI_1822 NC_009699.1 1954316 1954627 R identified by match to protein family HMM PF01906; hypothetical protein complement(1954316..1954627) Clostridium botulinum F str. Langeland 5402160 YP_001391083.1 CDS CLI_1823 NC_009699.1 1954608 1954841 R identified by Glimmer3; hypothetical protein complement(1954608..1954841) Clostridium botulinum F str. Langeland 5403424 YP_001391084.1 CDS CLI_1824 NC_009699.1 1954975 1955217 D hypothetical protein 1954975..1955217 Clostridium botulinum F str. Langeland 5403316 YP_001391085.1 CDS CLI_1825 NC_009699.1 1955220 1956944 D identified by match to protein family HMM PF00037; match to protein family HMM PF02906; match to protein family HMM PF04060; match to protein family HMM TIGR00229; sensory box-containing [Fe] hydrogenase 1955220..1956944 Clostridium botulinum F str. Langeland 5403391 YP_001391086.1 CDS CLI_1826 NC_009699.1 1956941 1958110 D identified by match to protein family HMM PF07228; sporulation domain-containing protein 1956941..1958110 Clostridium botulinum F str. Langeland 5405596 YP_001391087.1 CDS CLI_1827 NC_009699.1 1958246 1959985 D identified by match to protein family HMM PF00037; match to protein family HMM PF02906; match to protein family HMM PF04060; match to protein family HMM TIGR00229; sensory box-containing [Fe] hydrogenase 1958246..1959985 Clostridium botulinum F str. Langeland 5404336 YP_001391088.1 CDS hypE NC_009699.1 1960452 1961456 R identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR02124; hydrogenase expression/formation protein HypE complement(1960452..1961456) Clostridium botulinum F str. Langeland 5403586 YP_001391089.1 CDS hypD NC_009699.1 1961623 1962696 R identified by match to protein family HMM PF01924; hydrogenase expression/formation protein HypD complement(1961623..1962696) Clostridium botulinum F str. Langeland 5402773 YP_001391090.1 CDS CLI_1830 NC_009699.1 1962689 1962916 R identified by Glimmer3; hypothetical protein complement(1962689..1962916) Clostridium botulinum F str. Langeland 5404252 YP_001391091.1 CDS hypF NC_009699.1 1962879 1965317 R identified by match to protein family HMM PF00708; match to protein family HMM PF01300; match to protein family HMM PF07503; match to protein family HMM TIGR00143; [NiFe] hydrogenase maturation protein HypF complement(1962879..1965317) Clostridium botulinum F str. Langeland 5402905 YP_001391092.1 CDS CLI_1832 NC_009699.1 1965301 1965561 R identified by Glimmer3; hypothetical protein complement(1965301..1965561) Clostridium botulinum F str. Langeland 5404087 YP_001391093.1 CDS CLI_1833 NC_009699.1 1965815 1966330 R identified by match to protein family HMM PF00173; heme/steroid binding domain-containing protein complement(1965815..1966330) Clostridium botulinum F str. Langeland 5403627 YP_001391094.1 CDS CLI_1834 NC_009699.1 1966490 1966906 R identified by match to protein family HMM PF01750; hydrogenase maturation protease complement(1966490..1966906) Clostridium botulinum F str. Langeland 5403266 YP_001391095.1 CDS hupL NC_009699.1 1966939 1968354 R identified by match to protein family HMM PF00374; [Ni/Fe] hydrogenase, large subunit complement(1966939..1968354) Clostridium botulinum F str. Langeland 5402846 YP_001391096.1 CDS hupS NC_009699.1 1968456 1969328 R identified by match to protein family HMM PF01058; match to protein family HMM TIGR00391; [Ni/Fe] hydrogenase, small subunit complement(1968456..1969328) Clostridium botulinum F str. Langeland 5403812 YP_001391097.1 CDS CLI_1837 NC_009699.1 1969596 1970297 D TraX family protein 1969596..1970297 Clostridium botulinum F str. Langeland 5404697 YP_001391098.1 CDS CLI_1838 NC_009699.1 1970717 1970884 D identified by Glimmer3; hypothetical protein 1970717..1970884 Clostridium botulinum F str. Langeland 5404209 YP_001391099.1 CDS carB NC_009699.1 1971560 1974766 R four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit complement(1971560..1974766) Clostridium botulinum F str. Langeland 5403853 YP_001391100.1 CDS carA NC_009699.1 1974794 1975843 R catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit complement(1974794..1975843) Clostridium botulinum F str. Langeland 5404210 YP_001391101.1 CDS CLI_1841 NC_009699.1 1976360 1976527 D identified by Glimmer3; hypothetical protein 1976360..1976527 Clostridium botulinum F str. Langeland 5404674 YP_001391102.1 CDS CLI_1842 NC_009699.1 1976759 1976893 R identified by Glimmer3; hypothetical protein complement(1976759..1976893) Clostridium botulinum F str. Langeland 5405408 YP_001391103.1 CDS CLI_1845 NC_009699.1 1979978 1980703 R identified by Glimmer3; hypothetical protein complement(1979978..1980703) Clostridium botulinum F str. Langeland 5405101 YP_001391104.1 CDS CLI_1846 NC_009699.1 1980896 1981687 R identified by Glimmer3; hypothetical protein complement(1980896..1981687) Clostridium botulinum F str. Langeland 5402525 YP_001391105.1 CDS CLI_1847 NC_009699.1 1982861 1983967 D identified by Glimmer3; hypothetical protein 1982861..1983967 Clostridium botulinum F str. Langeland 5403716 YP_001391106.1 CDS CLI_1848 NC_009699.1 1984094 1985650 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(1984094..1985650) Clostridium botulinum F str. Langeland 5404993 YP_001391107.1 CDS CLI_1849 NC_009699.1 1986012 1987745 R identified by match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM PF02256; match to protein family HMM PF02906; match to protein family HMM TIGR02512; [Fe] hydrogenase complement(1986012..1987745) Clostridium botulinum F str. Langeland 5402218 YP_001391108.1 CDS CLI_1850 NC_009699.1 1987765 1989660 R identified by match to protein family HMM PF00037; match to protein family HMM PF01512; [Fe] hydrogenase, electron-transfer subunit complement(1987765..1989660) Clostridium botulinum F str. Langeland 5403494 YP_001391109.1 CDS CLI_1851 NC_009699.1 1989672 1990151 R identified by match to protein family HMM PF01257; Fe] hydrogenase, electron-transfer subunit complement(1989672..1990151) Clostridium botulinum F str. Langeland 5402718 YP_001391110.1 CDS CLI_1852 NC_009699.1 1990638 1991825 R identified by match to protein family HMM PF00999; monovalent cation:proton antiporter-2 (CPA2) family protein complement(1990638..1991825) Clostridium botulinum F str. Langeland 5404913 YP_001391111.1 CDS CLI_1853 NC_009699.1 1992084 1992962 R identified by match to protein family HMM PF03747; ADP-ribosylglycohydrolase family protein complement(1992084..1992962) Clostridium botulinum F str. Langeland 5401983 YP_001391112.1 CDS CLI_1854 NC_009699.1 1993204 1994298 D identified by match to protein family HMM PF01594; hypothetical protein 1993204..1994298 Clostridium botulinum F str. Langeland 5405086 YP_001391113.1 CDS dacB NC_009699.1 1994414 1995550 R identified by match to protein family HMM PF00768; D-alanyl-D-alanine carboxypeptidase complement(1994414..1995550) Clostridium botulinum F str. Langeland 5403312 YP_001391114.1 CDS CLI_1856 NC_009699.1 1995734 1996246 D hypothetical protein 1995734..1996246 Clostridium botulinum F str. Langeland 5403247 YP_001391115.1 CDS ytfJ NC_009699.1 1996314 1996754 D identified by match to protein family HMM TIGR02874; sporulation protein YtfJ 1996314..1996754 Clostridium botulinum F str. Langeland 5402831 YP_001391116.1 CDS scpB NC_009699.1 1996815 1997396 R functions during chromosome segregation; may form a condensin-like structure with SMC and ScpA; forms a homodimer; segregation and condensation protein B complement(1996815..1997396) Clostridium botulinum F str. Langeland 5404018 YP_001391117.1 CDS scpA NC_009699.1 1997389 1998135 R functions during chromosome segregation; may form a condensin-like structure with SMC and ScpB; segregation and condensation protein A complement(1997389..1998135) Clostridium botulinum F str. Langeland 5403916 YP_001391118.1 CDS CLI_1860 NC_009699.1 1998110 1998700 R hypothetical protein complement(1998110..1998700) Clostridium botulinum F str. Langeland 5405027 YP_001391119.1 CDS dacF NC_009699.1 1998924 2000147 R identified by match to protein family HMM PF00768; match to protein family HMM PF07943; D-alanyl-D-alanine carboxypeptidase complement(1998924..2000147) Clostridium botulinum F str. Langeland 5403690 YP_001391120.1 CDS CLI_1862 NC_009699.1 2000270 2000992 R hypothetical protein complement(2000270..2000992) Clostridium botulinum F str. Langeland 5405063 YP_001391121.1 CDS CLI_1863 NC_009699.1 2001151 2002209 R identified by match to protein family HMM PF03372; endonuclease/exonuclease/phosphatase family protein complement(2001151..2002209) Clostridium botulinum F str. Langeland 5402617 YP_001391122.1 CDS CLI_1864 NC_009699.1 2002351 2002599 R hypothetical protein complement(2002351..2002599) Clostridium botulinum F str. Langeland 5403328 YP_001391123.1 CDS pdp NC_009699.1 2002706 2004010 R identified by match to protein family HMM PF00591; match to protein family HMM PF02885; match to protein family HMM PF07831; match to protein family HMM TIGR02644; pyrimidine-nucleoside phosphorylase complement(2002706..2004010) Clostridium botulinum F str. Langeland 5402669 YP_001391124.1 CDS punA NC_009699.1 2004296 2005111 R catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation; purine nucleoside phosphorylase complement(2004296..2005111) Clostridium botulinum F str. Langeland 5402210 YP_001391125.1 CDS xerD NC_009699.1 2005149 2006024 R identified by match to protein family HMM PF00589; match to protein family HMM PF02899; match to protein family HMM TIGR02225; tyrosine recombinase XerD complement(2005149..2006024) Clostridium botulinum F str. Langeland 5404736 YP_001391126.1 CDS CLI_1868 NC_009699.1 2006076 2006303 R identified by similarity to GB:AAK80026.1; hypothetical protein complement(2006076..2006303) Clostridium botulinum F str. Langeland 5403331 YP_001391127.1 CDS CLI_1869 NC_009699.1 2006294 2006947 R identified by match to protein family HMM PF01944; match to protein family HMM TIGR02831; sporulation protein complement(2006294..2006947) Clostridium botulinum F str. Langeland 5405051 YP_001391128.1 CDS CLI_1870 NC_009699.1 2006988 2007101 D identified by Glimmer3; hypothetical protein 2006988..2007101 Clostridium botulinum F str. Langeland 5402750 YP_001391129.1 CDS CLI_1871 NC_009699.1 2007154 2007690 R identified by match to protein family HMM PF00293; match to protein family HMM TIGR00052; NUDIX family hydrolase complement(2007154..2007690) Clostridium botulinum F str. Langeland 5404275 YP_001391130.1 CDS CLI_1872 NC_009699.1 2008174 2009700 R identified by match to protein family HMM PF00324; amino acid permease complement(2008174..2009700) Clostridium botulinum F str. Langeland 5404142 YP_001391131.1 CDS CLI_1873 NC_009699.1 2010517 2011272 R identified by match to protein family HMM PF00877; nlpC/P60 family protein complement(2010517..2011272) Clostridium botulinum F str. Langeland 5405347 YP_001391132.1 CDS CLI_1874 NC_009699.1 2012414 2012992 R identified by Glimmer3; hypothetical protein complement(2012414..2012992) Clostridium botulinum F str. Langeland 5403905 YP_001391133.1 CDS CLI_1875 NC_009699.1 2013245 2013526 R identified by similarity to GB:AAY80811.1; integrase domain-containing protein complement(2013245..2013526) Clostridium botulinum F str. Langeland 5404001 YP_001391134.1 CDS CLI_1876 NC_009699.1 2014408 2014995 R identified by Glimmer3; hypothetical protein complement(2014408..2014995) Clostridium botulinum F str. Langeland 5402697 YP_001391135.1 CDS CLI_1877 NC_009699.1 2015124 2015882 R identified by match to protein family HMM PF01520; match to protein family HMM PF08239; N-acetylmuramoyl-L-alanine amidase complement(2015124..2015882) Clostridium botulinum F str. Langeland 5405232 YP_001391136.1 CDS CLI_1878 NC_009699.1 2015923 2016117 R hypothetical protein complement(2015923..2016117) Clostridium botulinum F str. Langeland 5403175 YP_001391137.1 CDS CLI_1879 NC_009699.1 2016131 2016385 R hypothetical protein complement(2016131..2016385) Clostridium botulinum F str. Langeland 5403104 YP_001391138.1 CDS CLI_1880 NC_009699.1 2016532 2016726 R identified by Glimmer3; hypothetical protein complement(2016532..2016726) Clostridium botulinum F str. Langeland 5404245 YP_001391139.1 CDS CLI_1881 NC_009699.1 2017121 2017288 R identified by Glimmer3; hypothetical protein complement(2017121..2017288) Clostridium botulinum F str. Langeland 5403705 YP_001391140.1 CDS CLI_1882 NC_009699.1 2017329 2017544 R identified by Glimmer3; hypothetical protein complement(2017329..2017544) Clostridium botulinum F str. Langeland 5404251 YP_001391141.1 CDS CLI_1883 NC_009699.1 2017546 2017905 R identified by Glimmer3; hypothetical protein complement(2017546..2017905) Clostridium botulinum F str. Langeland 5402105 YP_001391142.1 CDS CLI_1884 NC_009699.1 2017921 2018508 R identified by Glimmer3; hypothetical protein complement(2017921..2018508) Clostridium botulinum F str. Langeland 5403365 YP_001391143.1 CDS CLI_1885 NC_009699.1 2018526 2018987 R identified by Glimmer3; hypothetical protein complement(2018526..2018987) Clostridium botulinum F str. Langeland 5402744 YP_001391144.1 CDS CLI_1886 NC_009699.1 2018984 2019805 R identified by similarity to GB:BAD74826.1; hypothetical protein complement(2018984..2019805) Clostridium botulinum F str. Langeland 5402179 YP_001391145.1 CDS CLI_1887 NC_009699.1 2019812 2020969 R identified by Glimmer3; hypothetical protein complement(2019812..2020969) Clostridium botulinum F str. Langeland 5402261 YP_001391146.1 CDS CLI_1888 NC_009699.1 2020973 2021842 R identified by similarity to GB:AAS39346.1; hypothetical protein complement(2020973..2021842) Clostridium botulinum F str. Langeland 5402503 YP_001391147.1 CDS CLI_1889 NC_009699.1 2021858 2025358 R identified by match to protein family HMM TIGR01760; TP901 family phage tail tape measure protein complement(2021858..2025358) Clostridium botulinum F str. Langeland 5402048 YP_001391148.1 CDS CLI_1890 NC_009699.1 2025375 2025554 R identified by Glimmer3; hypothetical protein complement(2025375..2025554) Clostridium botulinum F str. Langeland 5404959 YP_001391149.1 CDS CLI_1891 NC_009699.1 2025614 2025958 R identified by similarity to GB:ABG87923.1; hypothetical protein complement(2025614..2025958) Clostridium botulinum F str. Langeland 5401939 YP_001391150.1 CDS CLI_1892 NC_009699.1 2026020 2026607 R identified by match to protein family HMM TIGR01603; phi13 family phage major tail protein complement(2026020..2026607) Clostridium botulinum F str. Langeland 5404827 YP_001391151.1 CDS CLI_1893 NC_009699.1 2026689 2027045 R identified by similarity to GB:AAU40455.1; hypothetical protein complement(2026689..2027045) Clostridium botulinum F str. Langeland 5403843 YP_001391152.1 CDS CLI_1894 NC_009699.1 2027056 2027415 R identified by match to protein family HMM TIGR01725; HK97 family phage protein complement(2027056..2027415) Clostridium botulinum F str. Langeland 5402364 YP_001391153.1 CDS CLI_1895 NC_009699.1 2027415 2027783 R identified by match to protein family HMM PF06264; match to protein family HMM TIGR01563; phage head-tail adaptor complement(2027415..2027783) Clostridium botulinum F str. Langeland 5404561 YP_001391154.1 CDS CLI_1896 NC_009699.1 2027773 2028066 R identified by match to protein family HMM TIGR01560; phi-105 family phage protein complement(2027773..2028066) Clostridium botulinum F str. Langeland 5405412 YP_001391155.1 CDS CLI_1897 NC_009699.1 2028151 2029383 R identified by match to protein family HMM PF05065; match to protein family HMM TIGR01554; HK97 family phage major capsid protein complement(2028151..2029383) Clostridium botulinum F str. Langeland 5405026 YP_001391156.1 CDS CLI_1898 NC_009699.1 2029435 2030178 R identified by match to protein family HMM PF00574; Clp protease complement(2029435..2030178) Clostridium botulinum F str. Langeland 5402885 YP_001391157.1 CDS CLI_1899 NC_009699.1 2030171 2031403 R identified by match to protein family HMM PF04860; match to protein family HMM TIGR01537; HK97 family phage portal protein complement(2030171..2031403) Clostridium botulinum F str. Langeland 5402575 YP_001391158.1 CDS CLI_1900 NC_009699.1 2031465 2031647 R identified by Glimmer3; hypothetical protein complement(2031465..2031647) Clostridium botulinum F str. Langeland 5401942 YP_001391159.1 CDS CLI_1901 NC_009699.1 2031671 2033428 R identified by match to protein family HMM PF03354; phage terminase, large subunit complement(2031671..2033428) Clostridium botulinum F str. Langeland 5403441 YP_001391160.1 CDS CLI_1902 NC_009699.1 2033429 2033914 R identified by match to protein family HMM PF05119; match to protein family HMM TIGR01558; P27 family phage terminase small subunit complement(2033429..2033914) Clostridium botulinum F str. Langeland 5402848 YP_001391161.1 CDS CLI_1903 NC_009699.1 2034062 2034529 R identified by similarity to GB:AAO36630.1; hypothetical protein complement(2034062..2034529) Clostridium botulinum F str. Langeland 5404524 YP_001391162.1 CDS CLI_1904 NC_009699.1 2034622 2036415 R identified by similarity to GB:CAE15648.1; hypothetical protein complement(2034622..2036415) Clostridium botulinum F str. Langeland 5404318 YP_001391163.1 CDS CLI_1905 NC_009699.1 2036402 2036653 R identified by Glimmer3; hypothetical protein complement(2036402..2036653) Clostridium botulinum F str. Langeland 5403479 YP_001391164.1 CDS CLI_1906 NC_009699.1 2036634 2037227 R identified by Glimmer3; hypothetical protein complement(2036634..2037227) Clostridium botulinum F str. Langeland 5404344 YP_001391165.1 CDS CLI_1907 NC_009699.1 2037249 2037446 R identified by Glimmer3; hypothetical protein complement(2037249..2037446) Clostridium botulinum F str. Langeland 5402176 YP_001391166.1 CDS CLI_1908 NC_009699.1 2037476 2037721 R identified by similarity to GB:AAF07545.1; hypothetical protein complement(2037476..2037721) Clostridium botulinum F str. Langeland 5402676 YP_001391167.1 CDS CLI_1909 NC_009699.1 2037846 2038028 R identified by Glimmer3; hypothetical protein complement(2037846..2038028) Clostridium botulinum F str. Langeland 5405039 YP_001391168.1 CDS CLI_1910 NC_009699.1 2038079 2038291 R identified by Glimmer3; hypothetical protein complement(2038079..2038291) Clostridium botulinum F str. Langeland 5403003 YP_001391169.1 CDS CLI_1911 NC_009699.1 2038376 2038687 R identified by similarity to RF:XP_656249.1; hypothetical protein complement(2038376..2038687) Clostridium botulinum F str. Langeland 5405581 YP_001391170.1 CDS CLI_1912 NC_009699.1 2038717 2038905 R identified by Glimmer3; hypothetical protein complement(2038717..2038905) Clostridium botulinum F str. Langeland 5403621 YP_001391171.1 CDS CLI_1913 NC_009699.1 2038906 2039160 R identified by Glimmer3; hypothetical protein complement(2038906..2039160) Clostridium botulinum F str. Langeland 5402101 YP_001391172.1 CDS CLI_1914 NC_009699.1 2039235 2039789 R identified by match to protein family HMM PF01541; GIY-YIG domain-containing protein complement(2039235..2039789) Clostridium botulinum F str. Langeland 5403340 YP_001391173.1 CDS CLI_1915 NC_009699.1 2040038 2040484 R identified by Glimmer3; hypothetical protein complement(2040038..2040484) Clostridium botulinum F str. Langeland 5405061 YP_001391174.1 CDS CLI_1916 NC_009699.1 2040535 2041212 R identified by Glimmer3; hypothetical protein complement(2040535..2041212) Clostridium botulinum F str. Langeland 5402024 YP_001391175.1 CDS CLI_1917 NC_009699.1 2041514 2044537 R identified by similarity to GB:AAK79112.1; hypothetical protein complement(2041514..2044537) Clostridium botulinum F str. Langeland 5401998 YP_001391176.1 CDS CLI_1918 NC_009699.1 2044610 2044774 R identified by similarity to GB:AAT57259.1; hypothetical protein complement(2044610..2044774) Clostridium botulinum F str. Langeland 5403164 YP_001391177.1 CDS CLI_1919 NC_009699.1 2045132 2046268 R identified by Glimmer3; hypothetical protein complement(2045132..2046268) Clostridium botulinum F str. Langeland 5405400 YP_001391178.1 CDS CLI_1920 NC_009699.1 2046314 2047255 R identified by Glimmer3; hypothetical protein complement(2046314..2047255) Clostridium botulinum F str. Langeland 5401962 YP_001391179.1 CDS CLI_1921 NC_009699.1 2047301 2048053 R identified by Glimmer3; hypothetical protein complement(2047301..2048053) Clostridium botulinum F str. Langeland 5404479 YP_001391180.1 CDS CLI_1922 NC_009699.1 2048134 2048553 R identified by Glimmer3; hypothetical protein complement(2048134..2048553) Clostridium botulinum F str. Langeland 5403098 YP_001391181.1 CDS CLI_1923 NC_009699.1 2048599 2048757 R identified by similarity to GB:AAT51976.1; hypothetical protein complement(2048599..2048757) Clostridium botulinum F str. Langeland 5402539 YP_001391182.1 CDS CLI_1924 NC_009699.1 2049225 2049890 R identified by match to protein family HMM PF01381; DNA-binding protein complement(2049225..2049890) Clostridium botulinum F str. Langeland 5405568 YP_001391183.1 CDS CLI_1925 NC_009699.1 2050023 2050181 R identified by Glimmer3; hypothetical protein complement(2050023..2050181) Clostridium botulinum F str. Langeland 5403815 YP_001391184.1 CDS CLI_1926 NC_009699.1 2050174 2050503 R identified by Glimmer3; hypothetical protein complement(2050174..2050503) Clostridium botulinum F str. Langeland 5404636 YP_001391185.1 CDS CLI_1927 NC_009699.1 2050540 2050671 R identified by Glimmer3; hypothetical protein complement(2050540..2050671) Clostridium botulinum F str. Langeland 5402672 YP_001391186.1 CDS CLI_1928 NC_009699.1 2050754 2051083 R identified by Glimmer3; hypothetical protein complement(2050754..2051083) Clostridium botulinum F str. Langeland 5405070 YP_001391187.1 CDS CLI_1929 NC_009699.1 2051234 2051563 R identified by Glimmer3; hypothetical protein complement(2051234..2051563) Clostridium botulinum F str. Langeland 5404922 YP_001391188.1 CDS CLI_1930 NC_009699.1 2051851 2052336 D identified by Glimmer3; hypothetical protein 2051851..2052336 Clostridium botulinum F str. Langeland 5405284 YP_001391189.1 CDS CLI_1931 NC_009699.1 2052427 2052789 R identified by similarity to GB:AAP08290.1; hypothetical protein complement(2052427..2052789) Clostridium botulinum F str. Langeland 5405430 YP_001391190.1 CDS CLI_1932 NC_009699.1 2052815 2053495 R identified by similarity to GB:BAD58804.1; hypothetical protein complement(2052815..2053495) Clostridium botulinum F str. Langeland 5403363 YP_001391191.1 CDS CLI_1933 NC_009699.1 2053492 2053677 R identified by Glimmer3; hypothetical protein complement(2053492..2053677) Clostridium botulinum F str. Langeland 5402876 YP_001391192.1 CDS CLI_1934 NC_009699.1 2053942 2054442 R identified by Glimmer3; hypothetical protein complement(2053942..2054442) Clostridium botulinum F str. Langeland 5403318 YP_001391193.1 CDS CLI_1935 NC_009699.1 2054442 2055434 R identified by match to protein family HMM PF00589; match to protein family HMM PF02899; phage integrase family site specific recombinase complement(2054442..2055434) Clostridium botulinum F str. Langeland 5402972 YP_001391194.1 CDS spo0A NC_009699.1 2055570 2056391 R identified by match to protein family HMM PF00072; match to protein family HMM PF08769; match to protein family HMM TIGR02875; sporulation transcription factor Spo0A complement(2055570..2056391) Clostridium botulinum F str. Langeland 5404611 YP_001391195.1 CDS spoIVB NC_009699.1 2056822 2058048 R identified by match to protein family HMM PF00595; match to protein family HMM PF05580; match to protein family HMM TIGR02860; stage IV sporulation protein B complement(2056822..2058048) Clostridium botulinum F str. Langeland 5404955 YP_001391196.1 CDS metA NC_009699.1 2058470 2059366 R identified by match to protein family HMM PF04204; match to protein family HMM TIGR01001; homoserine O-succinyltransferase complement(2058470..2059366) Clostridium botulinum F str. Langeland 5403267 YP_001391197.1 CDS hom-2 NC_009699.1 2059393 2060619 R identified by match to protein family HMM PF00742; match to protein family HMM PF03447; homoserine dehydrogenase complement(2059393..2060619) Clostridium botulinum F str. Langeland 5403850 YP_001391198.1 CDS CLI_1940 NC_009699.1 2060659 2061939 R identified by match to protein family HMM PF01053; match to protein family HMM TIGR01326; O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein complement(2060659..2061939) Clostridium botulinum F str. Langeland 5402083 YP_001391199.1 CDS recN NC_009699.1 2062238 2063941 R identified by match to protein family HMM PF02463; match to protein family HMM TIGR00634; DNA repair protein recN complement(2062238..2063941) Clostridium botulinum F str. Langeland 5404141 YP_001391200.1 CDS argR NC_009699.1 2063954 2064406 R regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes; arginine repressor complement(2063954..2064406) Clostridium botulinum F str. Langeland 5403743 YP_001391201.1 CDS ppnK NC_009699.1 2064408 2065253 R identified by match to protein family HMM PF01513; ATP-NAD kinase complement(2064408..2065253) Clostridium botulinum F str. Langeland 5401860 YP_001391202.1 CDS CLI_1944 NC_009699.1 2065253 2066074 R identified by match to protein family HMM PF01479; match to protein family HMM PF01728; match to protein family HMM TIGR00478; hemolysin A complement(2065253..2066074) Clostridium botulinum F str. Langeland 5403524 YP_001391203.1 CDS dxs NC_009699.1 2066096 2067964 R catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase complement(2066096..2067964) Clostridium botulinum F str. Langeland 5402604 YP_001391204.1 CDS CLI_1946 NC_009699.1 2067965 2068522 R hypothetical protein complement(2067965..2068522) Clostridium botulinum F str. Langeland 5405536 YP_001391205.1 CDS ispA NC_009699.1 2069325 2070197 R identified by match to protein family HMM PF00348; geranyltranstransferase complement(2069325..2070197) Clostridium botulinum F str. Langeland 5404597 YP_001391206.1 CDS xseB NC_009699.1 2070322 2070537 R catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit complement(2070322..2070537) Clostridium botulinum F str. Langeland 5404117 YP_001391207.1 CDS xseA NC_009699.1 2070631 2071836 R bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit complement(2070631..2071836) Clostridium botulinum F str. Langeland 5405385 YP_001391208.1 CDS nusB NC_009699.1 2071907 2072338 R Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB complement(2071907..2072338) Clostridium botulinum F str. Langeland 5404324 YP_001391209.1 CDS asp NC_009699.1 2072477 2072872 R identified by match to protein family HMM PF03780; alkaline shock protein complement(2072477..2072872) Clostridium botulinum F str. Langeland 5404226 YP_001391210.1 CDS CLI_1952 NC_009699.1 2072954 2073478 R stage III sporulation protein AH complement(2072954..2073478) Clostridium botulinum F str. Langeland 5403902 YP_001391211.1 CDS CLI_1953 NC_009699.1 2073540 2074136 R identified by match to protein family HMM TIGR02830; stage III sporulation protein AG complement(2073540..2074136) Clostridium botulinum F str. Langeland 5404380 YP_001391212.1 CDS spoIIIAF NC_009699.1 2074275 2074865 R identified by match to protein family HMM TIGR02896; stage III sporulation protein AF complement(2074275..2074865) Clostridium botulinum F str. Langeland 5403888 YP_001391213.1 CDS CLI_1955 NC_009699.1 2074901 2076064 R identified by match to protein family HMM TIGR02829; stage III sporulation protein AE complement(2074901..2076064) Clostridium botulinum F str. Langeland 5404805 YP_001391214.1 CDS CLI_1956 NC_009699.1 2076073 2076456 R identified by match to protein family HMM TIGR02849; stage III sporulation protein AD complement(2076073..2076456) Clostridium botulinum F str. Langeland 5405304 YP_001391215.1 CDS CLI_1957 NC_009699.1 2076483 2076680 R identified by match to protein family HMM PF06686; match to protein family HMM TIGR02848; stage III sporulation protein AC complement(2076483..2076680) Clostridium botulinum F str. Langeland 5402012 YP_001391216.1 CDS CLI_1958 NC_009699.1 2076722 2077240 R necessary for complete engulfment of forespore; stage III sporulation protein SpoAB complement(2076722..2077240) Clostridium botulinum F str. Langeland 5403597 YP_001391217.1 CDS CLI_1959 NC_009699.1 2077277 2078200 R identified by match to protein family HMM TIGR02858; stage III sporulation protein AA complement(2077277..2078200) Clostridium botulinum F str. Langeland 5402457 YP_001391218.1 CDS CLI_1960 NC_009699.1 2078396 2078815 R hypothetical protein complement(2078396..2078815) Clostridium botulinum F str. Langeland 5404333 YP_001391219.1 CDS efp NC_009699.1 2078856 2079413 R Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P complement(2078856..2079413) Clostridium botulinum F str. Langeland 5402663 YP_001391220.1 CDS aroQ NC_009699.1 2079486 2079944 R catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase complement(2079486..2079944) Clostridium botulinum F str. Langeland 5403631 YP_001391221.1 CDS aroK NC_009699.1 2080099 2080611 R identified by match to protein family HMM PF01202; shikimate kinase complement(2080099..2080611) Clostridium botulinum F str. Langeland 5403370 YP_001391222.1 CDS CLI_1964 NC_009699.1 2080745 2081239 R hypothetical protein complement(2080745..2081239) Clostridium botulinum F str. Langeland 5404184 YP_001391223.1 CDS CLI_1965 NC_009699.1 2081245 2081691 R identified by Glimmer3; hypothetical protein complement(2081245..2081691) Clostridium botulinum F str. Langeland 5402219 YP_001391224.1 CDS CLI_1966 NC_009699.1 2081707 2082396 R hypothetical protein complement(2081707..2082396) Clostridium botulinum F str. Langeland 5403489 YP_001391225.1 CDS CLI_1967 NC_009699.1 2082424 2082870 R lipoprotein complement(2082424..2082870) Clostridium botulinum F str. Langeland 5402688 YP_001391226.1 CDS CLI_1968 NC_009699.1 2082849 2083289 R identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532; hypothetical protein complement(2082849..2083289) Clostridium botulinum F str. Langeland 5403955 YP_001391227.1 CDS CLI_1969 NC_009699.1 2083286 2083732 R identified by match to protein family HMM TIGR02532; hypothetical protein complement(2083286..2083732) Clostridium botulinum F str. Langeland 5403227 YP_001391228.1 CDS CLI_1970 NC_009699.1 2083713 2084165 R hypothetical protein complement(2083713..2084165) Clostridium botulinum F str. Langeland 5405199 YP_001391229.1 CDS CLI_1971 NC_009699.1 2084556 2084960 R identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532; pilin complement(2084556..2084960) Clostridium botulinum F str. Langeland 5404250 YP_001391230.1 CDS CLI_1972 NC_009699.1 2085146 2086336 R identified by match to protein family HMM PF00482; type II secretion system protein F complement(2085146..2086336) Clostridium botulinum F str. Langeland 5402458 YP_001391231.1 CDS CLI_1973 NC_009699.1 2086481 2088010 R identified by match to protein family HMM PF00437; match to protein family HMM PF05157; general secretion pathway protein E complement(2086481..2088010) Clostridium botulinum F str. Langeland 5403381 YP_001391232.1 CDS CLI_1974 NC_009699.1 2088159 2088287 R identified by Glimmer3; hypothetical protein complement(2088159..2088287) Clostridium botulinum F str. Langeland 5404294 YP_001391233.1 CDS CLI_1975 NC_009699.1 2088383 2089456 R lipoprotein complement(2088383..2089456) Clostridium botulinum F str. Langeland 5402095 YP_001391234.1 CDS dapF NC_009699.1 2089457 2090278 R involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase complement(2089457..2090278) Clostridium botulinum F str. Langeland 5404419 YP_001391235.1 CDS CLI_1977 NC_009699.1 2090532 2092262 D identified by match to protein family HMM PF05670; match to protein family HMM PF05833; fibronectin-binding protein 2090532..2092262 Clostridium botulinum F str. Langeland 5403086 YP_001391236.1 CDS truA-1 NC_009699.1 2092331 2093071 D mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 2092331..2093071 Clostridium botulinum F str. Langeland 5402999 YP_001391237.1 CDS CLI_1979 NC_009699.1 2093349 2093576 R identified by Glimmer3; hypothetical protein complement(2093349..2093576) Clostridium botulinum F str. Langeland 5404934 YP_001391238.1 CDS CLI_1980 NC_009699.1 2093612 2093989 R identified by match to protein family HMM PF01230; HIT family protein complement(2093612..2093989) Clostridium botulinum F str. Langeland 5404985 YP_001391239.1 CDS CLI_1981 NC_009699.1 2094500 2095903 D identified by match to protein family HMM PF00282; match to protein family HMM TIGR01788; glutamate decarboxylase 2094500..2095903 Clostridium botulinum F str. Langeland 5402916 YP_001391240.1 CDS CLI_1982 NC_009699.1 2096344 2096685 R identified by Glimmer3; hypothetical protein complement(2096344..2096685) Clostridium botulinum F str. Langeland 5401919 YP_001391241.1 CDS CLI_1983 NC_009699.1 2097190 2098899 R identified by match to protein family HMM PF00015; match to protein family HMM PF00672; methyl-accepting chemotaxis protein complement(2097190..2098899) Clostridium botulinum F str. Langeland 5405183 YP_001391242.1 CDS cloSI NC_009699.1 2099369 2100943 R identified by match to protein family HMM PF03415; match to protein family HMM TIGR02806; clostripain complement(2099369..2100943) Clostridium botulinum F str. Langeland 5403474 YP_001391243.1 CDS CLI_1985 NC_009699.1 2101423 2102079 D hypothetical protein 2101423..2102079 Clostridium botulinum F str. Langeland 5404693 YP_001391244.1 CDS CLI_1986 NC_009699.1 2102081 2102782 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 2102081..2102782 Clostridium botulinum F str. Langeland 5402807 YP_001391245.1 CDS CLI_1987 NC_009699.1 2102772 2104685 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase 2102772..2104685 Clostridium botulinum F str. Langeland 5403503 YP_001391246.1 CDS msrA NC_009699.1 2105051 2105524 R this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A complement(2105051..2105524) Clostridium botulinum F str. Langeland 5402747 YP_001391247.1 CDS CLI_1989 NC_009699.1 2105904 2106695 D identified by match to protein family HMM PF00072; response regulator 2105904..2106695 Clostridium botulinum F str. Langeland 5402936 YP_001391248.1 CDS CLI_1990 NC_009699.1 2106855 2108315 R identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase complement(2106855..2108315) Clostridium botulinum F str. Langeland 5402540 YP_001391249.1 CDS CLI_1991 NC_009699.1 2108312 2109001 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator complement(2108312..2109001) Clostridium botulinum F str. Langeland 5402066 YP_001391250.1 CDS CLI_1992 NC_009699.1 2109284 2110060 R hypothetical protein complement(2109284..2110060) Clostridium botulinum F str. Langeland 5404265 YP_001391251.1 CDS CLI_1993 NC_009699.1 2110222 2111073 R ABC transporter permease complement(2110222..2111073) Clostridium botulinum F str. Langeland 5405534 YP_001391252.1 CDS CLI_1994 NC_009699.1 2111073 2111816 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(2111073..2111816) Clostridium botulinum F str. Langeland 5404559 YP_001391253.1 CDS CLI_1995 NC_009699.1 2111776 2111931 D identified by Glimmer3; hypothetical protein 2111776..2111931 Clostridium botulinum F str. Langeland 5403043 YP_001391254.1 CDS CLI_1996 NC_009699.1 2112263 2114125 R identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease complement(2112263..2114125) Clostridium botulinum F str. Langeland 5403900 YP_001391255.1 CDS CLI_1997 NC_009699.1 2114122 2116422 R identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease complement(2114122..2116422) Clostridium botulinum F str. Langeland 5403668 YP_001391256.1 CDS CLI_1998 NC_009699.1 2116836 2117279 D identified by match to protein family HMM PF01047; MarR family transcriptional regulator 2116836..2117279 Clostridium botulinum F str. Langeland 5402311 YP_001391257.1 CDS bltD NC_009699.1 2117392 2117832 D identified by similarity to SP:P39909; match to protein family HMM PF00583; spermine/spermidine acetyltransferase 2117392..2117832 Clostridium botulinum F str. Langeland 5403184 YP_001391258.1 CDS moeB NC_009699.1 2118061 2118744 R identified by match to protein family HMM PF00899; molybdopterin biosynthesis protein MoeB complement(2118061..2118744) Clostridium botulinum F str. Langeland 5404353 YP_001391259.1 CDS moaD NC_009699.1 2118746 2118973 R identified by match to protein family HMM PF02597; molybdopterin converting factor subunit 1 complement(2118746..2118973) Clostridium botulinum F str. Langeland 5403769 YP_001391260.1 CDS aor NC_009699.1 2119256 2121073 R identified by match to protein family HMM PF01314; match to protein family HMM PF02730; aldehyde ferredoxin oxidoreductase, tungsten-containing complement(2119256..2121073) Clostridium botulinum F str. Langeland 5404686 YP_001391261.1 CDS CLI_2003 NC_009699.1 2121167 2121298 R identified by Glimmer3; hypothetical protein complement(2121167..2121298) Clostridium botulinum F str. Langeland 5403708 YP_001391262.1 CDS aorR NC_009699.1 2121467 2123362 R identified by match to protein family HMM PF00158; match to protein family HMM PF01590; match to protein family HMM PF02954; match to protein family HMM TIGR00229; aor transcriptional regulator complement(2121467..2123362) Clostridium botulinum F str. Langeland 5404201 YP_001391263.1 CDS CLI_2005 NC_009699.1 2123412 2123852 R identified by match to protein family HMM PF03473; MOSC domain-containing protein complement(2123412..2123852) Clostridium botulinum F str. Langeland 5403730 YP_001391264.1 CDS moaC NC_009699.1 2123854 2124333 R MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC complement(2123854..2124333) Clostridium botulinum F str. Langeland 5404397 YP_001391265.1 CDS moaA NC_009699.1 2124337 2125296 R identified by match to protein family HMM PF04055; match to protein family HMM PF06463; match to protein family HMM TIGR02666; molybdenum cofactor biosynthesis protein A complement(2124337..2125296) Clostridium botulinum F str. Langeland 5404612 YP_001391266.1 CDS CLI_2008 NC_009699.1 2125355 2127259 R identified by match to protein family HMM PF00994; match to protein family HMM PF03453; match to protein family HMM PF03454; match to protein family HMM TIGR00177; molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein complement(2125355..2127259) Clostridium botulinum F str. Langeland 5402161 YP_001391267.1 CDS moeA NC_009699.1 2127271 2128497 R identified by match to protein family HMM PF00994; match to protein family HMM PF03453; match to protein family HMM PF03454; match to protein family HMM TIGR00177; molybdopterin biosynthesis enzyme MoeA complement(2127271..2128497) Clostridium botulinum F str. Langeland 5402431 YP_001391268.1 CDS mog NC_009699.1 2128521 2129009 R identified by match to protein family HMM PF00994; match to protein family HMM TIGR00177; molybdopterin biosynthesis enzyme Mog complement(2128521..2129009) Clostridium botulinum F str. Langeland 5404451 YP_001391269.1 CDS tupC NC_009699.1 2129211 2129903 R identified by match to protein family HMM PF00005; tungstate ABC transporter ATP-binding protein complement(2129211..2129903) Clostridium botulinum F str. Langeland 5402096 YP_001391270.1 CDS tupB NC_009699.1 2129900 2130571 R identified by match to protein family HMM PF00528; tungstate ABC transporter permease complement(2129900..2130571) Clostridium botulinum F str. Langeland 5403172 YP_001391271.1 CDS CLI_2013 NC_009699.1 2130580 2131431 R identified by match to protein family HMM PF01547; tungstate ABC transporter tungstate-binding protein complement(2130580..2131431) Clostridium botulinum F str. Langeland 5402668 YP_001391272.1 CDS CLI_2014 NC_009699.1 2131651 2132973 R identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein complement(2131651..2132973) Clostridium botulinum F str. Langeland 5404925 YP_001391273.1 CDS CLI_2015 NC_009699.1 2132973 2133170 R identified by Glimmer3; hypothetical protein complement(2132973..2133170) Clostridium botulinum F str. Langeland 5402121 YP_001391274.1 CDS CLI_2016 NC_009699.1 2133412 2134056 R identified by match to protein family HMM PF09335; hypothetical protein complement(2133412..2134056) Clostridium botulinum F str. Langeland 5403431 YP_001391275.1 CDS CLI_2017 NC_009699.1 2134378 2135049 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(2134378..2135049) Clostridium botulinum F str. Langeland 5402659 YP_001391276.1 CDS CLI_2018 NC_009699.1 2135064 2136536 R identified by match to protein family HMM PF02687; ABC transporter permease complement(2135064..2136536) Clostridium botulinum F str. Langeland 5403373 YP_001391277.1 CDS CLI_2019 NC_009699.1 2136874 2137032 D identified by Glimmer3; hypothetical protein 2136874..2137032 Clostridium botulinum F str. Langeland 5403188 YP_001391278.1 CDS CLI_2020 NC_009699.1 2137337 2139094 R identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease complement(2137337..2139094) Clostridium botulinum F str. Langeland 5404156 YP_001391279.1 CDS CLI_2021 NC_009699.1 2139091 2140821 R identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease complement(2139091..2140821) Clostridium botulinum F str. Langeland 5403786 YP_001391280.1 CDS CLI_2022 NC_009699.1 2140937 2141758 D identified by match to protein family HMM PF00376; ABC transporter 2140937..2141758 Clostridium botulinum F str. Langeland 5404128 YP_001391281.1 CDS CLI_2023 NC_009699.1 2142177 2142803 D identified by match to protein family HMM PF03358; NADPH-dependent FMN reductase 2142177..2142803 Clostridium botulinum F str. Langeland 5405345 YP_001391282.1 CDS CLI_2024 NC_009699.1 2143980 2144975 D identified by match to protein family HMM PF00560; internalin 2143980..2144975 Clostridium botulinum F str. Langeland 5403624 YP_001391283.1 CDS CLI_2025 NC_009699.1 2144997 2147084 D identified by match to protein family HMM PF02839; match to protein family HMM TIGR03296; carbohydrate binding protein 2144997..2147084 Clostridium botulinum F str. Langeland 5404030 YP_001391284.1 CDS CLI_2026 NC_009699.1 2147406 2149448 R identified by match to protein family HMM PF00158; match to protein family HMM PF07728; sigma-54 dependent transcriptional regulator complement(2147406..2149448) Clostridium botulinum F str. Langeland 5403596 YP_001391285.1 CDS CLI_2027 NC_009699.1 2149855 2150109 R hypothetical protein complement(2149855..2150109) Clostridium botulinum F str. Langeland 5401889 YP_001391286.1 CDS CLI_2028 NC_009699.1 2150122 2150490 R identified by match to protein family HMM PF01042; match to protein family HMM TIGR00004; endoribonuclease L-PSP complement(2150122..2150490) Clostridium botulinum F str. Langeland 5405493 YP_001391287.1 CDS CLI_2029 NC_009699.1 2150532 2151803 R identified by match to protein family HMM PF00375; sodium:dicarboxylate symporter family protein complement(2150532..2151803) Clostridium botulinum F str. Langeland 5402074 YP_001391288.1 CDS CLI_2030 NC_009699.1 2151849 2153018 R identified by match to protein family HMM PF00155; aminotransferase, classes I and II complement(2151849..2153018) Clostridium botulinum F str. Langeland 5402707 YP_001391289.1 CDS CLI_2031 NC_009699.1 2153332 2154624 D identified by match to protein family HMM PF06354; hypothetical protein 2153332..2154624 Clostridium botulinum F str. Langeland 5402632 YP_001391290.1 CDS CLI_2032 NC_009699.1 2154964 2155959 D identified by match to protein family HMM PF00560; internalin 2154964..2155959 Clostridium botulinum F str. Langeland 5403982 YP_001391291.1 CDS CLI_2033 NC_009699.1 2155980 2158199 D identified by match to protein family HMM TIGR03296; hypothetical protein 2155980..2158199 Clostridium botulinum F str. Langeland 5402056 YP_001391292.1 CDS CLI_2034 NC_009699.1 2158400 2159839 R identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase complement(2158400..2159839) Clostridium botulinum F str. Langeland 5402596 YP_001391293.1 CDS CLI_2035 NC_009699.1 2159829 2160494 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator complement(2159829..2160494) Clostridium botulinum F str. Langeland 5402362 YP_001391294.1 CDS CLI_2036 NC_009699.1 2160808 2161623 R identified by match to protein family HMM PF02596; hypothetical protein complement(2160808..2161623) Clostridium botulinum F str. Langeland 5401927 YP_001391295.1 CDS CLI_2037 NC_009699.1 2161649 2162404 R identified by match to protein family HMM PF02361; ABC transporter permease complement(2161649..2162404) Clostridium botulinum F str. Langeland 5402327 YP_001391296.1 CDS CLI_2038 NC_009699.1 2162420 2163853 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(2162420..2163853) Clostridium botulinum F str. Langeland 5402231 YP_001391297.1 CDS CLI_2039 NC_009699.1 2163856 2164422 R ABC transporter permease complement(2163856..2164422) Clostridium botulinum F str. Langeland 5403996 YP_001391298.1 CDS CLI_2040 NC_009699.1 2164583 2165650 R identified by match to protein family HMM PF01168; alanine racemase complement(2164583..2165650) Clostridium botulinum F str. Langeland 5405206 YP_001391299.1 CDS CLI_2041 NC_009699.1 2166049 2167134 D identified by match to protein family HMM PF03845; match to protein family HMM TIGR00912; spore germination protein 2166049..2167134 Clostridium botulinum F str. Langeland 5402420 YP_001391300.1 CDS CLI_2042 NC_009699.1 2167217 2168719 D identified by match to protein family HMM PF03323; spore germination protein 2167217..2168719 Clostridium botulinum F str. Langeland 5404503 YP_001391301.1 CDS CLI_2043 NC_009699.1 2168709 2169797 D identified by match to protein family HMM PF03845; match to protein family HMM TIGR00912; spore germination protein 2168709..2169797 Clostridium botulinum F str. Langeland 5404644 YP_001391302.1 CDS CLI_2044 NC_009699.1 2169787 2170899 D identified by match to protein family HMM PF05504; match to protein family HMM TIGR02887; Ger(x)C family germination protein 2169787..2170899 Clostridium botulinum F str. Langeland 5403656 YP_001391303.1 CDS CLI_2045 NC_009699.1 2170941 2172050 D identified by match to protein family HMM PF03845; match to protein family HMM TIGR00912; spore germination protein 2170941..2172050 Clostridium botulinum F str. Langeland 5402832 YP_001391304.1 CDS CLI_2046 NC_009699.1 2172078 2172506 R identified by match to protein family HMM TIGR01909; hypothetical protein complement(2172078..2172506) Clostridium botulinum F str. Langeland 5402563 YP_001391305.1 CDS pcaC-2 NC_009699.1 2172866 2173198 D identified by match to protein family HMM PF02627; match to protein family HMM TIGR00778; 4-carboxymuconolactone decarboxylase 2172866..2173198 Clostridium botulinum F str. Langeland 5403819 YP_001391306.1 CDS CLI_2048 NC_009699.1 2173211 2174191 D identified by match to protein family HMM PF04055; radical SAM domain-containing protein 2173211..2174191 Clostridium botulinum F str. Langeland 5404480 YP_001391307.1 CDS CLI_2049 NC_009699.1 2174372 2175127 D identified by match to protein family HMM PF00515; match to protein family HMM PF07719; hypothetical protein 2174372..2175127 Clostridium botulinum F str. Langeland 5405640 YP_001391308.1 CDS CLI_2050 NC_009699.1 2175333 2176763 R the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli; potassium/proton antiporter complement(2175333..2176763) Clostridium botulinum F str. Langeland 5405025 YP_001391309.1 CDS hsp90 NC_009699.1 2177363 2179243 R molecular chaperone; heat shock protein 90 complement(2177363..2179243) Clostridium botulinum F str. Langeland 5404487 YP_001391310.1 CDS CLI_2052 NC_009699.1 2179788 2181353 D identified by match to protein family HMM PF00488; MutS domain-containing protein 2179788..2181353 Clostridium botulinum F str. Langeland 5405237 YP_001391311.1 CDS treP NC_009699.1 2181835 2183262 D identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826; match to protein family HMM TIGR01992; PTS system, trehalose-specific IIBC component 2181835..2183262 Clostridium botulinum F str. Langeland 5402194 YP_001391312.1 CDS treC NC_009699.1 2183365 2185032 D identified by match to protein family HMM PF00128; match to protein family HMM TIGR02403; alpha,alpha-phosphotrehalase 2183365..2185032 Clostridium botulinum F str. Langeland 5402941 YP_001391313.1 CDS treR NC_009699.1 2185065 2185775 D identified by match to protein family HMM PF00392; match to protein family HMM PF07702; match to protein family HMM TIGR02404; trehalose operon repressor 2185065..2185775 Clostridium botulinum F str. Langeland 5404690 YP_001391314.1 CDS CLI_2056 NC_009699.1 2186136 2186576 R identified by match to protein family HMM PF00359; match to protein family HMM TIGR00848; PTS system fructose family transporter subunit IIA complement(2186136..2186576) Clostridium botulinum F str. Langeland 5403770 YP_001391315.1 CDS CLI_2057 NC_009699.1 2186777 2186896 R identified by Glimmer3; hypothetical protein complement(2186777..2186896) Clostridium botulinum F str. Langeland 5402374 YP_001391316.1 CDS CLI_2058 NC_009699.1 2186856 2188253 R identified by match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR01427; PTS system fructose family transporter subunit IIBC complement(2186856..2188253) Clostridium botulinum F str. Langeland 5405612 YP_001391317.1 CDS CLI_2059 NC_009699.1 2188254 2189177 R identified by match to protein family HMM PF00294; match to protein family HMM TIGR03168; PfkB family kinase complement(2188254..2189177) Clostridium botulinum F str. Langeland 5401851 YP_001391318.1 CDS gatY NC_009699.1 2189197 2190057 R catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1,6-bisphosphate; in enteric bacteria there are two D-tagatose 1,6-bisphosphate-specific aldolases: KbaY (also called AgaY), involved in catabolism of N-acetyl-galactosamine and D-galactosamine, and GatY which is part of the galactitol catabolism pathway; tagatose-bisphosphate aldolase complement(2189197..2190057) Clostridium botulinum F str. Langeland 5402910 YP_001391319.1 CDS CLI_2061 NC_009699.1 2190257 2190994 R identified by match to protein family HMM PF01380; match to protein family HMM PF01418; transcriptional regulator complement(2190257..2190994) Clostridium botulinum F str. Langeland 5404386 YP_001391320.1 CDS CLI_2062 NC_009699.1 2191079 2191486 R hypothetical protein complement(2191079..2191486) Clostridium botulinum F str. Langeland 5404420 YP_001391321.1 CDS CLI_2063 NC_009699.1 2191848 2192243 D identified by match to protein family HMM PF01042; endoribonuclease L-PSP family protein 2191848..2192243 Clostridium botulinum F str. Langeland 5402839 YP_001391322.1 CDS CLI_2064 NC_009699.1 2192548 2193417 R identified by match to protein family HMM PF04055; radical SAM domain-containing protein complement(2192548..2193417) Clostridium botulinum F str. Langeland 5402125 YP_001391323.1 CDS gldA NC_009699.1 2193830 2194921 D forms dimers and octamers; involved in conversion of glycerol to dihydroxy-acetone; glycerol dehydrogenase 2193830..2194921 Clostridium botulinum F str. Langeland 5403787 YP_001391324.1 CDS CLI_2066 NC_009699.1 2195169 2195282 R identified by Glimmer3; hypothetical protein complement(2195169..2195282) Clostridium botulinum F str. Langeland 5402696 YP_001391325.1 CDS CLI_2067 NC_009699.1 2195412 2197061 R identified by match to protein family HMM PF00015; match to protein family HMM PF00672; methyl-accepting chemotaxis protein complement(2195412..2197061) Clostridium botulinum F str. Langeland 5403687 YP_001391326.1 CDS CLI_2068 NC_009699.1 2197055 2197168 R identified by Glimmer3; hypothetical protein complement(2197055..2197168) Clostridium botulinum F str. Langeland 5404894 YP_001391327.1 CDS CLI_2069 NC_009699.1 2197233 2198294 R identified by match to protein family HMM PF01168; alanine racemase complement(2197233..2198294) Clostridium botulinum F str. Langeland 5404852 YP_001391328.1 CDS CLI_2070 NC_009699.1 2198651 2198929 R hypothetical protein complement(2198651..2198929) Clostridium botulinum F str. Langeland 5403344 YP_001391329.1 CDS CLI_2071 NC_009699.1 2199399 2200463 D identified by match to protein family HMM PF01118; match to protein family HMM PF01408; match to protein family HMM PF02894; oxidoreductase family protein 2199399..2200463 Clostridium botulinum F str. Langeland 5403210 YP_001391330.1 CDS CLI_2072 NC_009699.1 2200707 2201252 R Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis; adenine phosphoribosyltransferase complement(2200707..2201252) Clostridium botulinum F str. Langeland 5405330 YP_001391331.1 CDS CLI_2073 NC_009699.1 2201268 2202332 R identified by match to protein family HMM PF00860; xanthine/uracil permease family protein complement(2201268..2202332) Clostridium botulinum F str. Langeland 5401892 YP_001391332.1 CDS CLI_2074 NC_009699.1 2202774 2203322 R identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254; diguanylate cyclase complement(2202774..2203322) Clostridium botulinum F str. Langeland 5402859 YP_001391333.1 CDS CLI_2075 NC_009699.1 2203556 2204860 R identified by match to protein family HMM PF06354; hypothetical protein complement(2203556..2204860) Clostridium botulinum F str. Langeland 5404106 YP_001391334.1 CDS CLI_2076 NC_009699.1 2205120 2206895 R identified by match to protein family HMM PF00158; match to protein family HMM PF02954; sigma-54 dependent transcriptional regulator complement(2205120..2206895) Clostridium botulinum F str. Langeland 5404413 YP_001391335.1 CDS CLI_2077 NC_009699.1 2207361 2208491 D identified by match to protein family HMM PF00270; match to protein family HMM PF00271; DEAD/DEAH box helicase 2207361..2208491 Clostridium botulinum F str. Langeland 5402330 YP_001391336.1 CDS CLI_2078 NC_009699.1 2208811 2209602 D identified by match to protein family HMM PF00188; match to protein family HMM TIGR02909; SCP-like extracellular protein 2208811..2209602 Clostridium botulinum F str. Langeland 5403134 YP_001391337.1 CDS CLI_2079 NC_009699.1 2209705 2211051 R identified by match to protein family HMM PF00155; match to protein family HMM PF00392; GntR family transcriptional regulator complement(2209705..2211051) Clostridium botulinum F str. Langeland 5403531 YP_001391338.1 CDS CLI_2080 NC_009699.1 2211200 2212108 D identified by match to protein family HMM PF00892; hypothetical protein 2211200..2212108 Clostridium botulinum F str. Langeland 5405227 YP_001391339.1 CDS aspB-2 NC_009699.1 2212399 2213550 R catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase complement(2212399..2213550) Clostridium botulinum F str. Langeland 5403498 YP_001391340.1 CDS CLI_2082 NC_009699.1 2213570 2214292 R identified by match to protein family HMM PF00005; polar amino acid ABC transporter ATP-binding protein complement(2213570..2214292) Clostridium botulinum F str. Langeland 5403238 YP_001391341.1 CDS CLI_2083 NC_009699.1 2214279 2214965 R identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; His/Glu/Gln/Arg/opine ABC transporter permease complement(2214279..2214965) Clostridium botulinum F str. Langeland 5405215 YP_001391342.1 CDS CLI_2084 NC_009699.1 2215035 2215853 R identified by match to protein family HMM PF00497; polar amino acid ABC transporter amino acid-binding protein complement(2215035..2215853) Clostridium botulinum F str. Langeland 5404188 YP_001391343.1 CDS CLI_2085 NC_009699.1 2215941 2217221 R hypothetical protein complement(2215941..2217221) Clostridium botulinum F str. Langeland 5403954 YP_001391344.1 CDS CLI_2086 NC_009699.1 2217585 2218724 R identified by match to protein family HMM PF00266; class V aminotransferase complement(2217585..2218724) Clostridium botulinum F str. Langeland 5404157 YP_001391345.1 CDS cat-2 NC_009699.1 2218837 2219502 R identified by match to protein family HMM PF00302; chloramphenicol acetyltransferase complement(2218837..2219502) Clostridium botulinum F str. Langeland 5404357 YP_001391346.1 CDS CLI_2088 NC_009699.1 2219998 2220210 R hypothetical protein complement(2219998..2220210) Clostridium botulinum F str. Langeland 5404129 YP_001391347.1 CDS CLI_2089 NC_009699.1 2220476 2220697 R hypothetical protein complement(2220476..2220697) Clostridium botulinum F str. Langeland 5402898 YP_001391348.1 CDS CLI_2090 NC_009699.1 2221272 2221988 R hypothetical protein complement(2221272..2221988) Clostridium botulinum F str. Langeland 5402353 YP_001391349.1 CDS CLI_2091 NC_009699.1 2222213 2222428 R identified by match to protein family HMM PF01381; DNA-binding protein complement(2222213..2222428) Clostridium botulinum F str. Langeland 5403278 YP_001391350.1 CDS CLI_2092 NC_009699.1 2222421 2222816 R identified by similarity to GB:AAO36439.1; hypothetical protein complement(2222421..2222816) Clostridium botulinum F str. Langeland 5404839 YP_001391351.1 CDS CLI_2093 NC_009699.1 2223250 2224602 R identified by match to protein family HMM PF00854; match to protein family HMM PF07690; match to protein family HMM TIGR00924; amino acid/peptide transporter complement(2223250..2224602) Clostridium botulinum F str. Langeland 5402389 YP_001391352.1 CDS CLI_2094 NC_009699.1 2224913 2226259 R identified by match to protein family HMM PF00854; match to protein family HMM PF07690; match to protein family HMM TIGR00924; amino acid/peptide transporter complement(2224913..2226259) Clostridium botulinum F str. Langeland 5405446 YP_001391353.1 CDS pepQ NC_009699.1 2226768 2227856 D identified by match to protein family HMM PF00557; match to protein family HMM PF01321; proline dipeptidase 2226768..2227856 Clostridium botulinum F str. Langeland 5405114 YP_001391354.1 CDS pepIP NC_009699.1 2227938 2228819 D identified by match to protein family HMM PF00561; match to protein family HMM TIGR01250; proline iminopeptidase 2227938..2228819 Clostridium botulinum F str. Langeland 5405372 YP_001391355.1 CDS CLI_2097 NC_009699.1 2228967 2229092 R identified by Glimmer3; hypothetical protein complement(2228967..2229092) Clostridium botulinum F str. Langeland 5403288 YP_001391356.1 CDS CLI_2098 NC_009699.1 2229109 2230602 R identified by match to protein family HMM PF00209; sodium:neurotransmitter symporter family protein complement(2229109..2230602) Clostridium botulinum F str. Langeland 5402934 YP_001391357.1 CDS CLI_2099 NC_009699.1 2231005 2231652 R identified by Glimmer3; hypothetical protein complement(2231005..2231652) Clostridium botulinum F str. Langeland 5405213 YP_001391358.1 CDS CLI_2100 NC_009699.1 2231689 2234166 R thrombospondin type 3 repeat-containing protein complement(2231689..2234166) Clostridium botulinum F str. Langeland 5403892 YP_001391359.1 CDS CLI_2101 NC_009699.1 2234582 2235082 R identified by match to protein family HMM PF00881; nitroreductase family protein complement(2234582..2235082) Clostridium botulinum F str. Langeland 5405104 YP_001391360.1 CDS CLI_2102 NC_009699.1 2235187 2237130 R identified by Glimmer3; hypothetical protein complement(2235187..2237130) Clostridium botulinum F str. Langeland 5405309 YP_001391361.1 CDS CLI_2103 NC_009699.1 2237145 2238380 R identified by Glimmer3; hypothetical protein complement(2237145..2238380) Clostridium botulinum F str. Langeland 5402167 YP_001391362.1 CDS CLI_2104 NC_009699.1 2238377 2240488 R hypothetical protein complement(2238377..2240488) Clostridium botulinum F str. Langeland 5404429 YP_001391363.1 CDS CLI_2105 NC_009699.1 2240610 2242403 R similar to streptococcal 67 kDa myosin-cross-reactive antigen family protein; in group A Streptococci this protein was found to cross react with anti myosin antibodies and may play a role in rheumatic fever; myosin-cross-reactive antigen complement(2240610..2242403) Clostridium botulinum F str. Langeland 5403660 YP_001391364.1 CDS CLI_2106 NC_009699.1 2242707 2243276 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(2242707..2243276) Clostridium botulinum F str. Langeland 5403392 YP_003204973.1 CDS CLI_2107 NC_009699.1 2243438 2243899 R hypothetical protein complement(2243438..2243899) Clostridium botulinum F str. Langeland 5405650 YP_001391365.1 CDS CLI_2109 NC_009699.1 2244473 2244850 R identified by Glimmer3; hypothetical protein complement(2244473..2244850) Clostridium botulinum F str. Langeland 5404203 YP_001391366.1 CDS CLI_2110 NC_009699.1 2244804 2246051 D identified by Glimmer3; hypothetical protein 2244804..2246051 Clostridium botulinum F str. Langeland 5403185 YP_001391367.1 CDS CLI_2111 NC_009699.1 2246511 2247572 R identified by Glimmer3; hypothetical protein complement(2246511..2247572) Clostridium botulinum F str. Langeland 5404873 YP_001391368.1 CDS CLI_2112 NC_009699.1 2247616 2248260 R identified by match to protein family HMM PF00132; hexapeptide repeat-containing transferase complement(2247616..2248260) Clostridium botulinum F str. Langeland 5403566 YP_001391369.1 CDS CLI_2113 NC_009699.1 2248352 2249491 R identified by match to protein family HMM PF01041; match to protein family HMM PF01212; aminotransferase complement(2248352..2249491) Clostridium botulinum F str. Langeland 5402865 YP_001391370.1 CDS CLI_2114 NC_009699.1 2249537 2250436 R identified by Glimmer3; hypothetical protein complement(2249537..2250436) Clostridium botulinum F str. Langeland 5404851 YP_001391371.1 CDS CLI_2115 NC_009699.1 2250638 2251699 D identified by match to protein family HMM PF00483; match to protein family HMM TIGR01208; glucose-1-phosphate thymidylyltransferase 2250638..2251699 Clostridium botulinum F str. Langeland 5401890 YP_001391372.1 CDS rfbB NC_009699.1 2251741 2252721 D identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01181; dTDP-glucose 4,6-dehydratase 2251741..2252721 Clostridium botulinum F str. Langeland 5403054 YP_001391373.1 CDS CLI_2117 NC_009699.1 2252764 2252952 D identified by Glimmer3; hypothetical protein 2252764..2252952 Clostridium botulinum F str. Langeland 5403644 YP_001391374.1 CDS CLI_2118 NC_009699.1 2252997 2253290 D hypothetical protein 2252997..2253290 Clostridium botulinum F str. Langeland 5404825 YP_001391375.1 CDS CLI_2119 NC_009699.1 2253541 2253834 D hypothetical protein 2253541..2253834 Clostridium botulinum F str. Langeland 5403242 YP_001391376.1 CDS CLI_2121 NC_009699.1 2254872 2256161 R lipase complement(2254872..2256161) Clostridium botulinum F str. Langeland 5405010 YP_001391377.1 CDS CLI_2122 NC_009699.1 2257134 2257808 R identified by match to protein family HMM PF04892; vanZF protein complement(2257134..2257808) Clostridium botulinum F str. Langeland 5402626 YP_001391378.1 CDS CLI_2123 NC_009699.1 2257949 2259130 R identified by match to protein family HMM PF00201; match to protein family HMM PF04101; match to protein family HMM TIGR01426; macrolide glycosyltransferase complement(2257949..2259130) Clostridium botulinum F str. Langeland 5402698 YP_001391379.1 CDS CLI_2124 NC_009699.1 2259123 2259428 R identified by match to protein family HMM PF04014; match to protein family HMM TIGR01439; AbrB family transcriptional regulator complement(2259123..2259428) Clostridium botulinum F str. Langeland 5403395 YP_001391380.1 CDS codA NC_009699.1 2259609 2260874 R Catalyzes the deamination of cytosine to uracil and ammonia; cytosine deaminase complement(2259609..2260874) Clostridium botulinum F str. Langeland 5405185 YP_001391381.1 CDS codB NC_009699.1 2260918 2262189 R identified by match to protein family HMM PF02133; cytosine permease complement(2260918..2262189) Clostridium botulinum F str. Langeland 5402402 YP_001391382.1 CDS CLI_2127 NC_009699.1 2262448 2262579 R identified by Glimmer3; hypothetical protein complement(2262448..2262579) Clostridium botulinum F str. Langeland 5403243 YP_001391383.1 CDS CLI_2128 NC_009699.1 2262746 2263870 R identified by match to protein family HMM PF04055; radical SAM domain-containing protein complement(2262746..2263870) Clostridium botulinum F str. Langeland 5402680 YP_001391384.1 CDS CLI_2129 NC_009699.1 2264208 2264339 R identified by Glimmer3; hypothetical protein complement(2264208..2264339) Clostridium botulinum F str. Langeland 5402199 YP_001391385.1 CDS CLI_2130 NC_009699.1 2264991 2266634 R identified by similarity to SP:P05302; match to protein family HMM PF00145; match to protein family HMM TIGR00675; DNA (cytosine-5-)-methyltransferase complement(2264991..2266634) Clostridium botulinum F str. Langeland 5405098 YP_001391386.1 CDS CLI_2131 NC_009699.1 2266705 2268456 R hypothetical protein complement(2266705..2268456) Clostridium botulinum F str. Langeland 5405497 YP_001391387.1 CDS CLI_2132 NC_009699.1 2268453 2269469 R identified by Glimmer3; hypothetical protein complement(2268453..2269469) Clostridium botulinum F str. Langeland 5402569 YP_001391388.1 CDS CLI_2133 NC_009699.1 2269453 2272236 R identified by similarity to GB:ABB49434.1; hypothetical protein complement(2269453..2272236) Clostridium botulinum F str. Langeland 5404740 YP_001391389.1 CDS CLI_2134 NC_009699.1 2272271 2273752 R identified by similarity to GB:BAC12130.1; hypothetical protein complement(2272271..2273752) Clostridium botulinum F str. Langeland 5402754 YP_001391390.1 CDS CLI_2135 NC_009699.1 2274385 2275854 R identified by Glimmer3; hypothetical protein complement(2274385..2275854) Clostridium botulinum F str. Langeland 5404495 YP_001391391.1 CDS CLI_2136 NC_009699.1 2275867 2277126 R identified by Glimmer3; hypothetical protein complement(2275867..2277126) Clostridium botulinum F str. Langeland 5402106 YP_001391392.1 CDS CLI_2141 NC_009699.1 2280846 2282015 R identified by Glimmer3; hypothetical protein complement(2280846..2282015) Clostridium botulinum F str. Langeland 5405663 YP_001391393.1 CDS CLI_2142 NC_009699.1 2282462 2283385 R identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; NAD-dependent epimerase/dehydratase family protein complement(2282462..2283385) Clostridium botulinum F str. Langeland 5404979 YP_001391394.1 CDS CLI_2143 NC_009699.1 2283790 2285142 D identified by match to protein family HMM PF00535; glycosyl transferase 2283790..2285142 Clostridium botulinum F str. Langeland 5405314 YP_001391395.1 CDS CLI_2144 NC_009699.1 2285181 2287628 D identified by match to protein family HMM PF00534; glycoside hydrolase family protein 2285181..2287628 Clostridium botulinum F str. Langeland 5404956 YP_001391396.1 CDS CLI_2145 NC_009699.1 2287893 2289848 R identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03764; match to protein family HMM TIGR00231; tetracycline resistance protein complement(2287893..2289848) Clostridium botulinum F str. Langeland 5403936 YP_001391397.1 CDS CLI_2146 NC_009699.1 2290364 2293141 R identified by match to protein family HMM PF02839; match to protein family HMM PF03272; enhancing factor complement(2290364..2293141) Clostridium botulinum F str. Langeland 5402641 YP_001391398.1 CDS cadA-2 NC_009699.1 2293676 2295547 R identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01512; match to protein family HMM TIGR01525; cadmium-translocating P-type ATPase complement(2293676..2295547) Clostridium botulinum F str. Langeland 5403212 YP_001391399.1 CDS CLI_2148 NC_009699.1 2295729 2296004 R identified by similarity to GB:BAE81951.1; match to protein family HMM PF02583; hypothetical protein complement(2295729..2296004) Clostridium botulinum F str. Langeland 5403580 YP_001391400.1 CDS CLI_2149 NC_009699.1 2296127 2296417 R identified by match to protein family HMM PF00936; microcompartments family protein complement(2296127..2296417) Clostridium botulinum F str. Langeland 5403025 YP_001391401.1 CDS CLI_2150 NC_009699.1 2296492 2297142 R identified by match to protein family HMM PF06130; propanediol utilization protein PduL-like protein complement(2296492..2297142) Clostridium botulinum F str. Langeland 5404499 YP_001391402.1 CDS eutE NC_009699.1 2297142 2298740 R identified by match to protein family HMM PF00171; match to protein family HMM TIGR02518; acetaldehyde dehydrogenase complement(2297142..2298740) Clostridium botulinum F str. Langeland 5402733 YP_001391403.1 CDS CLI_2152 NC_009699.1 2298775 2299659 R identified by match to protein family HMM PF00936; carbon dioxide concentrating mechanism protein CcmK-like protein complement(2298775..2299659) Clostridium botulinum F str. Langeland 5402816 YP_001391404.1 CDS CLI_2153 NC_009699.1 2299680 2300342 R identified by match to protein family HMM PF05899; match to protein family HMM PF06249; ethanolamine utilization protein EutQ-like protein complement(2299680..2300342) Clostridium botulinum F str. Langeland 5402254 YP_001391405.1 CDS CLI_2154 NC_009699.1 2300532 2300795 R identified by match to protein family HMM PF03319; polyhedral organelle formation protein complement(2300532..2300795) Clostridium botulinum F str. Langeland 5403520 YP_001391406.1 CDS CLI_2155 NC_009699.1 2300792 2301094 R identified by match to protein family HMM PF00936; hypothetical protein complement(2300792..2301094) Clostridium botulinum F str. Langeland 5404908 YP_001391407.1 CDS CLI_2156 NC_009699.1 2301172 2302017 R identified by match to protein family HMM TIGR02529; ethanolamine utilization protein EutJ family protein complement(2301172..2302017) Clostridium botulinum F str. Langeland 5404788 YP_001391408.1 CDS CLI_2157 NC_009699.1 2301999 2302715 R hypothetical protein complement(2301999..2302715) Clostridium botulinum F str. Langeland 5403969 YP_001391409.1 CDS CLI_2158 NC_009699.1 2302722 2303168 R EutP/PduV family GTP-binding protein complement(2302722..2303168) Clostridium botulinum F str. Langeland 5405229 YP_001391410.1 CDS CLI_2159 NC_009699.1 2303165 2303518 R identified by match to protein family HMM PF00936; ethanolamine utilization protein EutS-like protein complement(2303165..2303518) Clostridium botulinum F str. Langeland 5402666 YP_001391411.1 CDS CLI_2160 NC_009699.1 2303558 2304511 R identified by match to protein family HMM PF00037; match to protein family HMM PF04055; match to protein family HMM TIGR02494; glycyl-radical enzyme activating family protein complement(2303558..2304511) Clostridium botulinum F str. Langeland 5405622 YP_001391412.1 CDS CLI_2161 NC_009699.1 2304693 2307233 R identified by match to protein family HMM PF01228; match to protein family HMM PF02901; formate acetyltransferase complement(2304693..2307233) Clostridium botulinum F str. Langeland 5404895 YP_001391413.1 CDS CLI_2162 NC_009699.1 2307283 2308776 R aldehyde dehydrogenase complement(2307283..2308776) Clostridium botulinum F str. Langeland 5404312 YP_001391414.1 CDS CLI_2163 NC_009699.1 2308814 2309122 R identified by match to protein family HMM PF00936; microcompartments family protein complement(2308814..2309122) Clostridium botulinum F str. Langeland 5405353 YP_001391415.1 CDS CLI_2164 NC_009699.1 2309146 2309442 R identified by match to protein family HMM PF00936; microcompartments family protein complement(2309146..2309442) Clostridium botulinum F str. Langeland 5403914 YP_001391416.1 CDS CLI_2165 NC_009699.1 2309515 2309667 R identified by Glimmer3; hypothetical protein complement(2309515..2309667) Clostridium botulinum F str. Langeland 5402470 YP_001391417.1 CDS CLI_2166 NC_009699.1 2309746 2310012 R identified by Glimmer3; hypothetical protein complement(2309746..2310012) Clostridium botulinum F str. Langeland 5402657 YP_001391418.1 CDS CLI_2167 NC_009699.1 2309999 2311111 R hypothetical protein complement(2309999..2311111) Clostridium botulinum F str. Langeland 5404390 YP_001391419.1 CDS CLI_2168 NC_009699.1 2311597 2312427 R identified by match to protein family HMM PF00376; MerR family transcriptional regulator complement(2311597..2312427) Clostridium botulinum F str. Langeland 5401858 YP_001391420.1 CDS CLI_2169 NC_009699.1 2312544 2313686 R identified by match to protein family HMM PF00465; alcohol dehydrogenase complement(2312544..2313686) Clostridium botulinum F str. Langeland 5403397 YP_001391421.1 CDS CLI_2170 NC_009699.1 2314199 2315500 D identified by match to protein family HMM PF01554; MATE efflux family protein 2314199..2315500 Clostridium botulinum F str. Langeland 5405241 YP_001391422.1 CDS CLI_2171 NC_009699.1 2315609 2316853 R identified by match to protein family HMM PF07690; major facilitator transporter complement(2315609..2316853) Clostridium botulinum F str. Langeland 5404921 YP_001391423.1 CDS CLI_2172 NC_009699.1 2316894 2317583 R identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator complement(2316894..2317583) Clostridium botulinum F str. Langeland 5403825 YP_001391424.1 CDS CLI_2173 NC_009699.1 2317746 2318645 D identified by match to protein family HMM PF00583; match to protein family HMM PF01047; MarR family transcriptional regulator 2317746..2318645 Clostridium botulinum F str. Langeland 5403052 YP_001391425.1 CDS CLI_2174 NC_009699.1 2318786 2318905 D identified by Glimmer3; hypothetical protein 2318786..2318905 Clostridium botulinum F str. Langeland 5402376 YP_001391426.1 CDS CLI_2175 NC_009699.1 2318985 2319491 R hypothetical protein complement(2318985..2319491) Clostridium botulinum F str. Langeland 5403141 YP_001391427.1 CDS CLI_2176 NC_009699.1 2319632 2320420 R identified by match to protein family HMM PF09234; hypothetical protein complement(2319632..2320420) Clostridium botulinum F str. Langeland 5405607 YP_001391428.1 CDS CLI_2177 NC_009699.1 2321225 2321587 R hypothetical protein complement(2321225..2321587) Clostridium botulinum F str. Langeland 5405546 YP_001391429.1 CDS CLI_2178 NC_009699.1 2321600 2322088 R identified by match to protein family HMM TIGR01764; excisionase family DNA-binding protein complement(2321600..2322088) Clostridium botulinum F str. Langeland 5402146 YP_001391430.1 CDS CLI_2179 NC_009699.1 2322372 2323010 R identified by match to protein family HMM PF04203; match to protein family HMM TIGR01076; sortase family protein complement(2322372..2323010) Clostridium botulinum F str. Langeland 5403840 YP_001391431.1 CDS CLI_2180 NC_009699.1 2322979 2325690 R identified by Glimmer3; hypothetical protein complement(2322979..2325690) Clostridium botulinum F str. Langeland 5402660 YP_001391432.1 CDS CLI_2181 NC_009699.1 2326007 2327026 R identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase complement(2326007..2327026) Clostridium botulinum F str. Langeland 5405246 YP_001391433.1 CDS CLI_2182 NC_009699.1 2327023 2327694 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator complement(2327023..2327694) Clostridium botulinum F str. Langeland 5402597 YP_001391434.1 CDS CLI_2183 NC_009699.1 2327891 2328601 R hypothetical protein complement(2327891..2328601) Clostridium botulinum F str. Langeland 5402601 YP_001391435.1 CDS CLI_2184 NC_009699.1 2328594 2330822 R hypothetical protein complement(2328594..2330822) Clostridium botulinum F str. Langeland 5404119 YP_001391436.1 CDS CLI_2185 NC_009699.1 2330825 2331700 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(2330825..2331700) Clostridium botulinum F str. Langeland 5401868 YP_001391437.1 CDS CLI_2186 NC_009699.1 2331761 2333743 R identified by match to protein family HMM PF02687; ABC transporter permease complement(2331761..2333743) Clostridium botulinum F str. Langeland 5402904 YP_001391438.1 CDS CLI_2187 NC_009699.1 2334051 2335136 R FAD/NAD(P)-binding domain; oxidoreductase complement(2334051..2335136) Clostridium botulinum F str. Langeland 5403146 YP_001391439.1 CDS CLI_2188 NC_009699.1 2335129 2335374 R hypothetical protein complement(2335129..2335374) Clostridium botulinum F str. Langeland 5402038 YP_001391440.1 CDS CLI_2189 NC_009699.1 2335391 2335882 R hypothetical protein complement(2335391..2335882) Clostridium botulinum F str. Langeland 5405275 YP_001391441.1 CDS CLI_2190 NC_009699.1 2336335 2337357 R identified by match to protein family HMM PF00107; match to protein family HMM PF08240; zinc-binding dehydrogenase family oxidoreductase complement(2336335..2337357) Clostridium botulinum F str. Langeland 5403912 YP_001391442.1 CDS CLI_2191 NC_009699.1 2337442 2338299 R identified by match to protein family HMM PF01261; AP endonuclease complement(2337442..2338299) Clostridium botulinum F str. Langeland 5403398 YP_001391443.1 CDS CLI_2192 NC_009699.1 2338383 2339522 R identified by match to protein family HMM PF01761; 3-dehydroquinate synthase complement(2338383..2339522) Clostridium botulinum F str. Langeland 5403361 YP_001391444.1 CDS CLI_2193 NC_009699.1 2340088 2342079 R identified by match to protein family HMM PF02687; ABC transporter permease complement(2340088..2342079) Clostridium botulinum F str. Langeland 5402349 YP_001391445.1 CDS CLI_2194 NC_009699.1 2342069 2342836 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(2342069..2342836) Clostridium botulinum F str. Langeland 5404438 YP_001391446.1 CDS CLI_2195 NC_009699.1 2343624 2343977 R hypothetical protein complement(2343624..2343977) Clostridium botulinum F str. Langeland 5403722 YP_001391447.1 CDS CLI_2196 NC_009699.1 2344302 2346395 R identified by match to protein family HMM PF00359; match to protein family HMM PF00874; match to protein family HMM PF05043; match to protein family HMM PF08279; PRD domain-containing protein complement(2344302..2346395) Clostridium botulinum F str. Langeland 5404139 YP_001391448.1 CDS ulaA NC_009699.1 2346607 2347971 R membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr; PTS system ascorbate-specific transporter subunit IIC complement(2346607..2347971) Clostridium botulinum F str. Langeland 5403976 YP_001391449.1 CDS CLI_2198 NC_009699.1 2347984 2348268 R identified by match to protein family HMM PF02302; PTS system L-ascorbate family transporter subunit IIB complement(2347984..2348268) Clostridium botulinum F str. Langeland 5404000 YP_001391450.1 CDS CLI_2199 NC_009699.1 2348297 2348734 R identified by match to protein family HMM PF00359; PTS system L-ascorbate family transporter subunit IIA complement(2348297..2348734) Clostridium botulinum F str. Langeland 5402446 YP_001391451.1 CDS CLI_2200 NC_009699.1 2348758 2349474 R similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; translaldolase complement(2348758..2349474) Clostridium botulinum F str. Langeland 5401933 YP_001391452.1 CDS CLI_2201 NC_009699.1 2349709 2350113 R identified by Glimmer3; hypothetical protein complement(2349709..2350113) Clostridium botulinum F str. Langeland 5402372 YP_001391453.1 CDS CLI_2202 NC_009699.1 2350451 2351185 R identified by Glimmer3; hypothetical protein complement(2350451..2351185) Clostridium botulinum F str. Langeland 5403471 YP_001391454.1 CDS CLI_2203 NC_009699.1 2351369 2351542 R identified by Glimmer3; hypothetical protein complement(2351369..2351542) Clostridium botulinum F str. Langeland 5403428 YP_001391455.1 CDS CLI_2204 NC_009699.1 2353053 2353547 R hypothetical protein complement(2353053..2353547) Clostridium botulinum F str. Langeland 5403898 YP_001391456.1 CDS CLI_2205 NC_009699.1 2353590 2354204 R identified by match to protein family HMM PF00132; O-acetyltransferase family protein complement(2353590..2354204) Clostridium botulinum F str. Langeland 5404508 YP_001391457.1 CDS CLI_2207 NC_009699.1 2355195 2356586 D identified by match to protein family HMM PF00854; match to protein family HMM PF07690; match to protein family HMM TIGR00924; amino acid/peptide transporter 2355195..2356586 Clostridium botulinum F str. Langeland 5402197 YP_001391458.1 CDS CLI_2208 NC_009699.1 2356690 2357430 R identified by match to protein family HMM PF08241; match to protein family HMM PF08242; hypothetical protein complement(2356690..2357430) Clostridium botulinum F str. Langeland 5404442 YP_001391459.1 CDS CLI_2209 NC_009699.1 2357437 2358327 R identified by match to protein family HMM PF00165; match to protein family HMM PF06445; AraC family transcriptional regulator complement(2357437..2358327) Clostridium botulinum F str. Langeland 5404881 YP_001391460.1 CDS CLI_2210 NC_009699.1 2358628 2359149 D hypothetical protein 2358628..2359149 Clostridium botulinum F str. Langeland 5405606 YP_001391461.1 CDS CLI_2211 NC_009699.1 2359741 2359878 D identified by Glimmer3; hypothetical protein 2359741..2359878 Clostridium botulinum F str. Langeland 5402235 YP_001391462.1 CDS enr NC_009699.1 2361358 2363355 R identified by match to protein family HMM PF00070; match to protein family HMM PF00724; match to protein family HMM PF07992; 2-enoate reductase complement(2361358..2363355) Clostridium botulinum F str. Langeland 5403946 YP_001391463.1 CDS CLI_2213 NC_009699.1 2363452 2364249 R identified by match to protein family HMM PF00376; MerR family transcriptional regulator complement(2363452..2364249) Clostridium botulinum F str. Langeland 5403347 YP_001391464.1 CDS CLI_2214 NC_009699.1 2364298 2364591 R identified by Glimmer3; hypothetical protein complement(2364298..2364591) Clostridium botulinum F str. Langeland 5405207 YP_001391465.1 CDS cmr6 NC_009699.1 2365025 2366323 R identified by match to protein family HMM PF03787; match to protein family HMM TIGR01898; CRISPR-associated RAMP Cmr6 family protein complement(2365025..2366323) Clostridium botulinum F str. Langeland 5403065 YP_001391466.1 CDS cmr5 NC_009699.1 2366316 2366795 R identified by match to protein family HMM TIGR01881; CRISPR-associated Cmr5 family protein complement(2366316..2366795) Clostridium botulinum F str. Langeland 5403423 YP_001391467.1 CDS cmr4 NC_009699.1 2366795 2367658 R identified by match to protein family HMM PF03787; match to protein family HMM TIGR02580; CRISPR-associated RAMP Cmr4 family protein complement(2366795..2367658) Clostridium botulinum F str. Langeland 5403637 YP_001391468.1 CDS CLI_2218 NC_009699.1 2367672 2368943 R identified by Glimmer3; hypothetical protein complement(2367672..2368943) Clostridium botulinum F str. Langeland 5405292 YP_001391469.1 CDS cmr3 NC_009699.1 2368946 2370049 R CRISPR-associated Cmr3 family protein complement(2368946..2370049) Clostridium botulinum F str. Langeland 5404743 YP_001391470.1 CDS crm2 NC_009699.1 2370030 2371775 R CRISPR-associated RAMP Crm2 family protein complement(2370030..2371775) Clostridium botulinum F str. Langeland 5403375 YP_001391471.1 CDS cmr1 NC_009699.1 2371778 2372959 R identified by match to protein family HMM TIGR01894; CRISPR-associated RAMP Cmr1 family protein complement(2371778..2372959) Clostridium botulinum F str. Langeland 5402099 YP_001391472.1 CDS cas6 NC_009699.1 2373005 2373694 R identified by match to protein family HMM TIGR01877; CRISPR-associated Cas family protein complement(2373005..2373694) Clostridium botulinum F str. Langeland 5405091 YP_001391473.1 CDS CLI_2223 NC_009699.1 2374409 2376013 R hypothetical protein complement(2374409..2376013) Clostridium botulinum F str. Langeland 5403195 YP_001391474.1 CDS CLI_2224 NC_009699.1 2376145 2376258 R identified by Glimmer3; hypothetical protein complement(2376145..2376258) Clostridium botulinum F str. Langeland 5405594 YP_001391475.1 CDS CLI_2225 NC_009699.1 2376761 2377609 R identified by match to protein family HMM PF02567; match to protein family HMM TIGR00654; PhzF family phenazine biosynthesis protein complement(2376761..2377609) Clostridium botulinum F str. Langeland 5402055 YP_001391476.1 CDS CLI_2226 NC_009699.1 2377900 2378820 R identified by match to protein family HMM PF02567; match to protein family HMM TIGR00654; PhzF family phenazine biosynthesis protein complement(2377900..2378820) Clostridium botulinum F str. Langeland 5404253 YP_001391477.1 CDS CLI_2227 NC_009699.1 2379145 2380638 D identified by match to protein family HMM PF00155; match to protein family HMM PF00392; GntR family transcriptional regulator 2379145..2380638 Clostridium botulinum F str. Langeland 5404116 YP_001391478.1 CDS CLI_2228 NC_009699.1 2381710 2382075 R identified by match to protein family HMM PF00903; glyoxalase family protein complement(2381710..2382075) Clostridium botulinum F str. Langeland 5403648 YP_001391479.1 CDS CLI_2229 NC_009699.1 2382199 2382420 R identified by similarity to GB:AAK78435.1; hypothetical protein complement(2382199..2382420) Clostridium botulinum F str. Langeland 5403970 YP_001391480.1 CDS CLI_2230 NC_009699.1 2383088 2383534 D hypothetical protein 2383088..2383534 Clostridium botulinum F str. Langeland 5404663 YP_001391481.1 CDS CLI_2231 NC_009699.1 2383766 2384797 R identified by match to protein family HMM PF07859; lipase/esterase complement(2383766..2384797) Clostridium botulinum F str. Langeland 5403017 YP_001391482.1 CDS CLI_2232 NC_009699.1 2385228 2386127 D identified by Glimmer3; hypothetical protein 2385228..2386127 Clostridium botulinum F str. Langeland 5404604 YP_001391483.1 CDS CLI_2233 NC_009699.1 2386467 2387789 D identified by match to protein family HMM PF00324; match to protein family HMM PF05525; proton-linked D-serine/D-alanine/glycine symporter 2386467..2387789 Clostridium botulinum F str. Langeland 5402781 YP_001391484.1 CDS CLI_2234 NC_009699.1 2387857 2388591 R identified by match to protein family HMM PF00069; protein kinase domain-containing protein complement(2387857..2388591) Clostridium botulinum F str. Langeland 5403169 YP_001391485.1 CDS hgdC-2 NC_009699.1 2389094 2389867 R identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241; 2-hydroxyglutaryl-CoA dehydratase subunit A complement(2389094..2389867) Clostridium botulinum F str. Langeland 5403704 YP_001391486.1 CDS CLI_2236 NC_009699.1 2389961 2391526 R hypothetical protein complement(2389961..2391526) Clostridium botulinum F str. Langeland 5404656 YP_001391487.1 CDS CLI_2237 NC_009699.1 2391826 2392875 R identified by match to protein family HMM PF00766; match to protein family HMM PF01012; electron transfer flavoprotein subunit alpha/FixB family protein complement(2391826..2392875) Clostridium botulinum F str. Langeland 5403196 YP_001391488.1 CDS CLI_2238 NC_009699.1 2392894 2393679 R identified by match to protein family HMM PF01012; electron transfer flavoprotein subunit beta/FixA family protein complement(2392894..2393679) Clostridium botulinum F str. Langeland 5403854 YP_001391489.1 CDS CLI_2239 NC_009699.1 2393718 2394851 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase complement(2393718..2394851) Clostridium botulinum F str. Langeland 5402356 YP_001391490.1 CDS CLI_2240 NC_009699.1 2395094 2395222 R identified by Glimmer3; hypothetical protein complement(2395094..2395222) Clostridium botulinum F str. Langeland 5403442 YP_001391491.1 CDS CLI_2241 NC_009699.1 2395349 2396476 R identified by match to protein family HMM PF06050; R-2-hydroxyglutaryl-CoA dehydratase subunit beta complement(2395349..2396476) Clostridium botulinum F str. Langeland 5403151 YP_001391492.1 CDS CLI_2242 NC_009699.1 2396476 2397708 R identified by match to protein family HMM PF06050; R-2-hydroxyglutaryl-CoA dehydratase subunit alpha complement(2396476..2397708) Clostridium botulinum F str. Langeland 5402184 YP_001391493.1 CDS CLI_2243 NC_009699.1 2397771 2398985 R identified by match to protein family HMM PF02515; hydroxyacyl-CoA:R-2-hydroxyglutaryl-CoA transferase complement(2397771..2398985) Clostridium botulinum F str. Langeland 5404044 YP_001391494.1 CDS CLI_2244 NC_009699.1 2399634 2400455 R identified by match to protein family HMM PF00037; (Fe-S)-binding protein complement(2399634..2400455) Clostridium botulinum F str. Langeland 5403536 YP_001391495.1 CDS CLI_2245 NC_009699.1 2401015 2402286 D identified by match to protein family HMM PF06050; R-2-hydroxyglutaryl-CoA dehydratase subunit 2401015..2402286 Clostridium botulinum F str. Langeland 5402437 YP_001391496.1 CDS CLI_2246 NC_009699.1 2402289 2403983 D identified by match to protein family HMM PF01869; match to protein family HMM PF06050; match to protein family HMM TIGR00241; R-2-hydroxyglutaryl-CoA dehydratase subunit/ R-2-hydroxyglutaryl-CoA dehydratase activase 2402289..2403983 Clostridium botulinum F str. Langeland 5402506 YP_001391497.1 CDS CLI_2247 NC_009699.1 2404281 2405432 R identified by match to protein family HMM PF00015; methyl-accepting chemotaxis protein complement(2404281..2405432) Clostridium botulinum F str. Langeland 5403719 YP_001391498.1 CDS CLI_2248 NC_009699.1 2405764 2405937 R identified by Glimmer3; hypothetical protein complement(2405764..2405937) Clostridium botulinum F str. Langeland 5405363 YP_001391499.1 CDS CLI_2249 NC_009699.1 2406036 2406635 R hypothetical protein complement(2406036..2406635) Clostridium botulinum F str. Langeland 5403919 YP_001391500.1 CDS CLI_2250 NC_009699.1 2407025 2408014 R identified by similarity to SP:P54965; match to protein family HMM PF02275; linear amide C-N hydrolase complement(2407025..2408014) Clostridium botulinum F str. Langeland 5404553 YP_001391501.1 CDS CLI_2251 NC_009699.1 2408281 2408874 R identified by match to protein family HMM PF00583; acetyltransferase complement(2408281..2408874) Clostridium botulinum F str. Langeland 5402299 YP_001391502.1 CDS CLI_2252 NC_009699.1 2409219 2409632 D identified by similarity to SP:Q92AV8; match to protein family HMM PF00903; fosfomycin resistance family protein 2409219..2409632 Clostridium botulinum F str. Langeland 5402208 YP_001391503.1 CDS gntP NC_009699.1 2409799 2411187 R identified by match to protein family HMM PF02447; match to protein family HMM PF03600; match to protein family HMM PF06808; match to protein family HMM TIGR00791; gluconate permease complement(2409799..2411187) Clostridium botulinum F str. Langeland 5404688 YP_001391504.1 CDS CLI_2254 NC_009699.1 2411238 2411366 R identified by Glimmer3; hypothetical protein complement(2411238..2411366) Clostridium botulinum F str. Langeland 5401903 YP_001391505.1 CDS pdxA NC_009699.1 2411423 2412427 R catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase complement(2411423..2412427) Clostridium botulinum F str. Langeland 5402419 YP_001391506.1 CDS CLI_2256 NC_009699.1 2412440 2413777 R hypothetical protein complement(2412440..2413777) Clostridium botulinum F str. Langeland 5404581 YP_001391507.1 CDS CLI_2257 NC_009699.1 2413842 2414600 R identified by match to protein family HMM PF00455; match to protein family HMM PF08220; match to protein family HMM PF08279; DeoR family transcriptional regulator complement(2413842..2414600) Clostridium botulinum F str. Langeland 5403020 YP_001391508.1 CDS CLI_2258 NC_009699.1 2415139 2415306 D identified by Glimmer3; hypothetical protein 2415139..2415306 Clostridium botulinum F str. Langeland 5403061 YP_001391509.1 CDS CLI_2259 NC_009699.1 2415547 2416440 R identified by match to protein family HMM PF02517; CAAX amino terminal protease family protein complement(2415547..2416440) Clostridium botulinum F str. Langeland 5404868 YP_001391510.1 CDS CLI_2260 NC_009699.1 2416855 2418240 D identified by match to protein family HMM PF03734; ErfK/YbiS/YcfS/YnhG family protein 2416855..2418240 Clostridium botulinum F str. Langeland 5402555 YP_001391511.1 CDS CLI_2261 NC_009699.1 2418409 2418573 R identified by Glimmer3; hypothetical protein complement(2418409..2418573) Clostridium botulinum F str. Langeland 5404078 YP_001391512.1 CDS CLI_2262 NC_009699.1 2418685 2419278 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(2418685..2419278) Clostridium botulinum F str. Langeland 5403720 YP_001391513.1 CDS CLI_2263 NC_009699.1 2419422 2419949 D hypothetical protein 2419422..2419949 Clostridium botulinum F str. Langeland 5405539 YP_001391514.1 CDS CLI_2264 NC_009699.1 2420091 2420741 D hypothetical protein 2420091..2420741 Clostridium botulinum F str. Langeland 5403409 YP_001391515.1 CDS CLI_2265 NC_009699.1 2421007 2423469 D hypothetical protein 2421007..2423469 Clostridium botulinum F str. Langeland 5403712 YP_001391516.1 CDS CLI_2266 NC_009699.1 2423539 2424612 R identified by match to protein family HMM PF00107; match to protein family HMM PF08240; zinc-binding dehydrogenase family oxidoreductase complement(2423539..2424612) Clostridium botulinum F str. Langeland 5404255 YP_001391517.1 CDS CLI_2267 NC_009699.1 2425060 2427024 R identified by match to protein family HMM PF03063; match to protein family HMM TIGR01702; carbon monoxide dehydrogenase complement(2425060..2427024) Clostridium botulinum F str. Langeland 5405059 YP_001391518.1 CDS hypA-2 NC_009699.1 2427818 2428159 D identified by match to protein family HMM PF01155; hydrogenase nickel incorporation protein HypA 2427818..2428159 Clostridium botulinum F str. Langeland 5405218 YP_001391519.1 CDS hypB-2 NC_009699.1 2428162 2428800 D identified by match to protein family HMM PF02492; match to protein family HMM TIGR00073; hydrogenase nickel incorporation protein HypB 2428162..2428800 Clostridium botulinum F str. Langeland 5404468 YP_001391520.1 CDS CLI_2270 NC_009699.1 2428823 2429179 R identified by match to protein family HMM PF02579; dinitrogenase iron-molybdenum cofactor family protein complement(2428823..2429179) Clostridium botulinum F str. Langeland 5403472 YP_001391521.1 CDS CLI_2271 NC_009699.1 2429275 2430141 R identified by match to protein family HMM PF00037; match to protein family HMM PF01656; iron-sulfur binding protein complement(2429275..2430141) Clostridium botulinum F str. Langeland 5404577 YP_001391522.1 CDS CLI_2272 NC_009699.1 2430132 2430962 R identified by match to protein family HMM PF00037; match to protein family HMM PF01656; iron-sulfur binding protein complement(2430132..2430962) Clostridium botulinum F str. Langeland 5403696 YP_001391523.1 CDS CLI_2273 NC_009699.1 2430987 2431346 R identified by match to protein family HMM PF02579; dinitrogenase iron-molybdenum cofactor family protein complement(2430987..2431346) Clostridium botulinum F str. Langeland 5402741 YP_001391524.1 CDS CLI_2274 NC_009699.1 2431948 2432325 R identified by Glimmer3; hypothetical protein complement(2431948..2432325) Clostridium botulinum F str. Langeland 5403425 YP_001391525.1 CDS motB-1 NC_009699.1 2432620 2433384 R identified by match to protein family HMM PF00691; chemotaxis MotB protein complement(2432620..2433384) Clostridium botulinum F str. Langeland 5402118 YP_001391526.1 CDS motA-1 NC_009699.1 2433402 2434187 R With Mot B forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine.; flagellar motor protein MotA complement(2433402..2434187) Clostridium botulinum F str. Langeland 5403821 YP_001391527.1 CDS CLI_2277 NC_009699.1 2434909 2436525 R identified by match to protein family HMM PF04122; amidase complement(2434909..2436525) Clostridium botulinum F str. Langeland 5404976 YP_001391528.1 CDS CLI_2278 NC_009699.1 2436842 2437465 R hypothetical protein complement(2436842..2437465) Clostridium botulinum F str. Langeland 5404217 YP_001391529.1 CDS CLI_2279 NC_009699.1 2437745 2438086 R hypothetical protein complement(2437745..2438086) Clostridium botulinum F str. Langeland 5403798 YP_001391530.1 CDS CLI_2280 NC_009699.1 2438092 2440047 R identified by match to protein family HMM PF03169; match to protein family HMM TIGR00728; match to protein family HMM TIGR00733; OPT family oligopeptide transporter complement(2438092..2440047) Clostridium botulinum F str. Langeland 5402150 YP_001391531.1 CDS pepD-2 NC_009699.1 2440165 2441610 R identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01893; aminoacyl-histidine dipeptidase complement(2440165..2441610) Clostridium botulinum F str. Langeland 5403517 YP_001391532.1 CDS CLI_2282 NC_009699.1 2442169 2443197 R identified by match to protein family HMM PF01212; low specificity L-threonine aldolase complement(2442169..2443197) Clostridium botulinum F str. Langeland 5402779 YP_001391533.1 CDS CLI_2284 NC_009699.1 2443894 2444028 D identified by Glimmer3; hypothetical protein 2443894..2444028 Clostridium botulinum F str. Langeland 5404609 YP_001391534.1 CDS glxK NC_009699.1 2444025 2445167 R identified by match to protein family HMM PF02595; match to protein family HMM TIGR00045; glycerate kinase complement(2444025..2445167) Clostridium botulinum F str. Langeland 5403841 YP_001391535.1 CDS CLI_2285 NC_009699.1 2445387 2445518 R identified by Glimmer3; hypothetical protein complement(2445387..2445518) Clostridium botulinum F str. Langeland 5403087 YP_001391536.1 CDS CLI_2286 NC_009699.1 2445806 2446603 D identified by match to protein family HMM PF00106; short chain dehydrogenase/reductase family oxidoreductase 2445806..2446603 Clostridium botulinum F str. Langeland 5404879 YP_001391537.1 CDS CLI_2287 NC_009699.1 2446971 2448149 R sodium extrusion protein NatB complement(2446971..2448149) Clostridium botulinum F str. Langeland 5403736 YP_001391538.1 CDS CLI_2288 NC_009699.1 2448163 2448882 R identified by match to protein family HMM PF00005; sodium extrusion ATP-binding protein NatA complement(2448163..2448882) Clostridium botulinum F str. Langeland 5405609 YP_001391539.1 CDS CLI_2289 NC_009699.1 2449348 2449797 R identified by match to protein family HMM PF00583; acetyltransferase complement(2449348..2449797) Clostridium botulinum F str. Langeland 5403367 YP_001391540.1 CDS CLI_2290 NC_009699.1 2449811 2450275 R identified by match to protein family HMM PF01047; MarR family transcriptional regulator complement(2449811..2450275) Clostridium botulinum F str. Langeland 5402906 YP_001391541.1 CDS CLI_2291 NC_009699.1 2450694 2450828 D identified by Glimmer3; hypothetical protein 2450694..2450828 Clostridium botulinum F str. Langeland 5402077 YP_001391542.1 CDS CLI_2292 NC_009699.1 2451035 2451439 R hypothetical protein complement(2451035..2451439) Clostridium botulinum F str. Langeland 5403679 YP_001391543.1 CDS CLI_2293 NC_009699.1 2451535 2452605 R identified by match to protein family HMM PF01208; uroporphyrinogen decarboxylase complement(2451535..2452605) Clostridium botulinum F str. Langeland 5402455 YP_001391544.1 CDS CLI_2294 NC_009699.1 2452954 2454402 R identified by match to protein family HMM PF01266; match to protein family HMM PF04324; oxidoreductase, FAD/[2Fe-2S]-binding complement(2452954..2454402) Clostridium botulinum F str. Langeland 5404218 YP_001391545.1 CDS CLI_2295 NC_009699.1 2454750 2455568 D identified by match to protein family HMM PF00376; match to protein family HMM PF06445; MerR family transcriptional regulator 2454750..2455568 Clostridium botulinum F str. Langeland 5402858 YP_001391546.1 CDS CLI_2296 NC_009699.1 2455776 2457179 R identified by match to protein family HMM PF00324; amino acid permease complement(2455776..2457179) Clostridium botulinum F str. Langeland 5402493 YP_001391547.1 CDS CLI_2297 NC_009699.1 2457616 2458158 R identified by match to protein family HMM PF01661; hypothetical protein complement(2457616..2458158) Clostridium botulinum F str. Langeland 5402552 YP_001391548.1 CDS CLI_2298 NC_009699.1 2458535 2458792 R identified by match to protein family HMM PF06961; hypothetical protein complement(2458535..2458792) Clostridium botulinum F str. Langeland 5404847 YP_001391549.1 CDS CLI_2299 NC_009699.1 2459152 2459277 D identified by Glimmer3; hypothetical protein 2459152..2459277 Clostridium botulinum F str. Langeland 5402227 YP_001391550.1 CDS CLI_2300 NC_009699.1 2459296 2459727 D identified by match to protein family HMM PF01047; MarR family transcriptional regulator 2459296..2459727 Clostridium botulinum F str. Langeland 5405576 YP_001391551.1 CDS CLI_2301 NC_009699.1 2459730 2460122 D hypothetical protein 2459730..2460122 Clostridium botulinum F str. Langeland 5403145 YP_001391552.1 CDS CLI_2302 NC_009699.1 2460221 2460412 R identified by Glimmer3; hypothetical protein complement(2460221..2460412) Clostridium botulinum F str. Langeland 5402766 YP_001391553.1 CDS thiM-2 NC_009699.1 2460697 2461494 R identified by match to protein family HMM PF02110; hydroxyethylthiazole kinase complement(2460697..2461494) Clostridium botulinum F str. Langeland 5402613 YP_001391554.1 CDS thiW NC_009699.1 2461472 2462041 R identified by match to protein family HMM TIGR02359; thiW protein complement(2461472..2462041) Clostridium botulinum F str. Langeland 5404329 YP_001391555.1 CDS CLI_2305 NC_009699.1 2462482 2462919 R identified by match to protein family HMM PF00583; acetyltransferase complement(2462482..2462919) Clostridium botulinum F str. Langeland 5405413 YP_001391556.1 CDS CLI_2306 NC_009699.1 2463047 2463775 R identified by match to protein family HMM PF00753; metallo-beta-lactamase family protein complement(2463047..2463775) Clostridium botulinum F str. Langeland 5402623 YP_001391557.1 CDS CLI_2307 NC_009699.1 2463960 2464232 R hypothetical protein complement(2463960..2464232) Clostridium botulinum F str. Langeland 5404029 YP_001391558.1 CDS bioD NC_009699.1 2464517 2465200 R DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase complement(2464517..2465200) Clostridium botulinum F str. Langeland 5402203 YP_001391559.1 CDS bioB NC_009699.1 2465203 2466159 R identified by match to protein family HMM PF04055; match to protein family HMM PF06968; match to protein family HMM TIGR00433; biotin synthase complement(2465203..2466159) Clostridium botulinum F str. Langeland 5402366 YP_001391560.1 CDS CLI_2310 NC_009699.1 2466152 2466712 R identified by match to protein family HMM PF02632; BioY family protein complement(2466152..2466712) Clostridium botulinum F str. Langeland 5405592 YP_001391561.1 CDS CLI_2311 NC_009699.1 2466852 2467181 R hypothetical protein complement(2466852..2467181) Clostridium botulinum F str. Langeland 5403383 YP_001391562.1 CDS CLI_2312 NC_009699.1 2467169 2467597 R identified by match to protein family HMM PF01022; match to protein family HMM PF01047; MarR family transcriptional regulator complement(2467169..2467597) Clostridium botulinum F str. Langeland 5402835 YP_001391563.1 CDS CLI_2313 NC_009699.1 2467739 2468335 R hypothetical protein complement(2467739..2468335) Clostridium botulinum F str. Langeland 5404660 YP_001391564.1 CDS CLI_2314 NC_009699.1 2468513 2470306 D identified by match to protein family HMM PF00557; match to protein family HMM PF01321; M24 family metallopeptidase 2468513..2470306 Clostridium botulinum F str. Langeland 5404527 YP_001391565.1 CDS CLI_2315 NC_009699.1 2470337 2471734 D identified by match to protein family HMM PF00854; match to protein family HMM PF07690; match to protein family HMM TIGR00924; amino acid/peptide transporter 2470337..2471734 Clostridium botulinum F str. Langeland 5402136 YP_001391566.1 CDS CLI_2316 NC_009699.1 2471989 2472108 R identified by Glimmer3; hypothetical protein complement(2471989..2472108) Clostridium botulinum F str. Langeland 5403697 YP_001391567.1 CDS CLI_2317 NC_009699.1 2472224 2472472 R identified by Glimmer3; hypothetical protein complement(2472224..2472472) Clostridium botulinum F str. Langeland 5403341 YP_001391568.1 CDS CLI_2318 NC_009699.1 2472793 2473062 R hypothetical protein complement(2472793..2473062) Clostridium botulinum F str. Langeland 5402057 YP_001391569.1 CDS CLI_2319 NC_009699.1 2473258 2473596 D identified by Glimmer3; hypothetical protein 2473258..2473596 Clostridium botulinum F str. Langeland 5405188 YP_001391570.1 CDS CLI_2320 NC_009699.1 2473761 2474762 R identified by match to protein family HMM PF02275; match to protein family HMM PF03417; choloylglycine hydrolase family protein complement(2473761..2474762) Clostridium botulinum F str. Langeland 5403488 YP_001391571.1 CDS CLI_2321 NC_009699.1 2474960 2475541 R identified by match to protein family HMM PF02525; match to protein family HMM PF03358; hypothetical protein complement(2474960..2475541) Clostridium botulinum F str. Langeland 5402448 YP_001391572.1 CDS CLI_2322 NC_009699.1 2475992 2476231 R identified by Glimmer3; hypothetical protein complement(2475992..2476231) Clostridium botulinum F str. Langeland 5402909 YP_001391573.1 CDS CLI_2324 NC_009699.1 2476686 2476889 R identified by Glimmer3; hypothetical protein complement(2476686..2476889) Clostridium botulinum F str. Langeland 5404560 YP_001391574.1 CDS CLI_2325 NC_009699.1 2477701 2478033 D hypothetical protein 2477701..2478033 Clostridium botulinum F str. Langeland 5403915 YP_001391575.1 CDS CLI_2326 NC_009699.1 2478372 2479355 D hypothetical protein 2478372..2479355 Clostridium botulinum F str. Langeland 5405418 YP_001391576.1 CDS CLI_2327 NC_009699.1 2479450 2479617 R identified by Glimmer3; hypothetical protein complement(2479450..2479617) Clostridium botulinum F str. Langeland 5404948 YP_001391577.1 CDS CLI_2328 NC_009699.1 2479918 2480325 R identified by similarity to GB:ABG82857.1; hypothetical protein complement(2479918..2480325) Clostridium botulinum F str. Langeland 5404026 YP_001391578.1 CDS CLI_2329 NC_009699.1 2480406 2480999 R lipoprotein complement(2480406..2480999) Clostridium botulinum F str. Langeland 5404178 YP_001391579.1 CDS msrB NC_009699.1 2481172 2481621 R this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B complement(2481172..2481621) Clostridium botulinum F str. Langeland 5403233 YP_001391580.1 CDS sodF NC_009699.1 2481853 2482449 R identified by match to protein family HMM PF00081; match to protein family HMM PF02777; Mn/Fe superoxide dismutase complement(2481853..2482449) Clostridium botulinum F str. Langeland 5402700 YP_001391581.1 CDS CLI_2332 NC_009699.1 2482570 2484327 R identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein complement(2482570..2484327) Clostridium botulinum F str. Langeland 5405044 YP_001391582.1 CDS CLI_2333 NC_009699.1 2484607 2485566 R identified by match to protein family HMM PF00165; AraC family transcriptional regulator complement(2484607..2485566) Clostridium botulinum F str. Langeland 5405572 YP_001391583.1 CDS CLI_2334 NC_009699.1 2485812 2485925 R identified by Glimmer3; hypothetical protein complement(2485812..2485925) Clostridium botulinum F str. Langeland 5403755 YP_001391584.1 CDS CLI_2335 NC_009699.1 2486072 2486806 R hypothetical protein complement(2486072..2486806) Clostridium botulinum F str. Langeland 5402212 YP_001391585.1 CDS CLI_2336 NC_009699.1 2486842 2487588 R hypothetical protein complement(2486842..2487588) Clostridium botulinum F str. Langeland 5405117 YP_001391586.1 CDS CLI_2337 NC_009699.1 2487581 2488501 R identified by match to protein family HMM PF00005; antibiotic ABC transporter ATP-binding protein complement(2487581..2488501) Clostridium botulinum F str. Langeland 5403326 YP_001391587.1 CDS CLI_2338 NC_009699.1 2488703 2489614 R identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase complement(2488703..2489614) Clostridium botulinum F str. Langeland 5402800 YP_001391588.1 CDS CLI_2339 NC_009699.1 2489614 2490318 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator complement(2489614..2490318) Clostridium botulinum F str. Langeland 5404373 YP_001391589.1 CDS CLI_2340 NC_009699.1 2490673 2491434 D identified by match to protein family HMM PF00929; exonuclease family protein 2490673..2491434 Clostridium botulinum F str. Langeland 5404883 YP_001391590.1 CDS CLI_2341 NC_009699.1 2491468 2491770 R identified by match to protein family HMM PF07876; stress responsive alpha-beta barrel domain-containing protein complement(2491468..2491770) Clostridium botulinum F str. Langeland 5404303 YP_001391591.1 CDS CLI_2342 NC_009699.1 2491853 2492689 R identified by match to protein family HMM PF00753; metallo-beta-lactamase family protein complement(2491853..2492689) Clostridium botulinum F str. Langeland 5404481 YP_001391592.1 CDS def-1 NC_009699.1 2492991 2493443 R identified by match to protein family HMM PF01327; match to protein family HMM TIGR00079; peptide deformylase complement(2492991..2493443) Clostridium botulinum F str. Langeland 5402624 YP_001391593.1 CDS CLI_2344 NC_009699.1 2493444 2493680 R identified by match to protein family HMM PF01381; DNA-binding protein complement(2493444..2493680) Clostridium botulinum F str. Langeland 5403788 YP_001391594.1 CDS tgl NC_009699.1 2493920 2494741 R involved in assembly of spore coat proteins such as GerQ by catalyzing epsilon-(gamma-glutamyl)lysine cross links; transglutaminase complement(2493920..2494741) Clostridium botulinum F str. Langeland 5403745 YP_001391595.1 CDS CLI_2346 NC_009699.1 2494738 2495733 R identified by Glimmer3; hypothetical protein complement(2494738..2495733) Clostridium botulinum F str. Langeland 5402856 YP_001391596.1 CDS CLI_2347 NC_009699.1 2496537 2496650 R identified by Glimmer3; hypothetical protein complement(2496537..2496650) Clostridium botulinum F str. Langeland 5404193 YP_001391597.1 CDS CLI_2349 NC_009699.1 2497904 2498326 R identified by match to protein family HMM PF00258; match to protein family HMM TIGR01753; flavodoxin complement(2497904..2498326) Clostridium botulinum F str. Langeland 5402794 YP_001391598.1 CDS gapN NC_009699.1 2498348 2499811 R identified by similarity to SP:Q59931; match to protein family HMM PF00171; NADP-dependent glyceraldehyde-3-phosphate dehydrogenase complement(2498348..2499811) Clostridium botulinum F str. Langeland 5403947 YP_001391599.1 CDS CLI_2351 NC_009699.1 2499842 2500615 R identified by similarity to SP:P49852; match to protein family HMM PF00175; match to protein family HMM PF00970; match to protein family HMM PF08030; flavohemoprotein complement(2499842..2500615) Clostridium botulinum F str. Langeland 5404130 YP_001391600.1 CDS CLI_2353 NC_009699.1 2502654 2503166 R identified by Glimmer3; hypothetical protein complement(2502654..2503166) Clostridium botulinum F str. Langeland 5404469 YP_001391601.1 CDS CLI_2358 NC_009699.1 2505274 2506647 D identified by match to protein family HMM PF02366; hypothetical protein 2505274..2506647 Clostridium botulinum F str. Langeland 5402084 YP_001391602.1 CDS CLI_2359 NC_009699.1 2506849 2507154 R hypothetical protein complement(2506849..2507154) Clostridium botulinum F str. Langeland 5404492 YP_001391603.1 CDS CLI_2360 NC_009699.1 2507147 2507671 R hypothetical protein complement(2507147..2507671) Clostridium botulinum F str. Langeland 5404587 YP_001391604.1 CDS CLI_2361 NC_009699.1 2507652 2508104 R identified by Glimmer3; hypothetical protein complement(2507652..2508104) Clostridium botulinum F str. Langeland 5403651 YP_001391605.1 CDS CLI_2362 NC_009699.1 2508101 2508613 R identified by match to protein family HMM PF04542; match to protein family HMM TIGR02937; ECF subfamily RNA polymerase sigma factor complement(2508101..2508613) Clostridium botulinum F str. Langeland 5405566 YP_001391606.1 CDS CLI_2363 NC_009699.1 2509066 2510172 R identified by match to protein family HMM PF03845; match to protein family HMM TIGR00912; spore germination protein complement(2509066..2510172) Clostridium botulinum F str. Langeland 5405228 YP_001391607.1 CDS CLI_2364 NC_009699.1 2510696 2510902 R identified by similarity to GB:CAJ67102.1; hypothetical protein complement(2510696..2510902) Clostridium botulinum F str. Langeland 5403538 YP_001391608.1 CDS CLI_2365 NC_009699.1 2511110 2512462 R identified by match to protein family HMM PF01743; match to protein family HMM PF01966; match to protein family HMM TIGR00277; poly(A) polymerase complement(2511110..2512462) Clostridium botulinum F str. Langeland 5402224 YP_001391609.1 CDS CLI_2366 NC_009699.1 2512487 2512627 R hypothetical protein complement(2512487..2512627) Clostridium botulinum F str. Langeland 5404075 YP_001391610.1 CDS CLI_2367 NC_009699.1 2513184 2513378 R identified by similarity to SP:P41371; match to protein family HMM PF00269; small, acid-soluble spore protein complement(2513184..2513378) Clostridium botulinum F str. Langeland 5402193 YP_001391611.1 CDS CLI_2368 NC_009699.1 2513918 2514376 R identified by Glimmer3; hypothetical protein complement(2513918..2514376) Clostridium botulinum F str. Langeland 5401880 YP_001391612.1 CDS CLI_2369 NC_009699.1 2514404 2514655 R identified by Glimmer3; hypothetical protein complement(2514404..2514655) Clostridium botulinum F str. Langeland 5404409 YP_001391613.1 CDS CLI_2370 NC_009699.1 2515009 2515161 R identified by Glimmer3; hypothetical protein complement(2515009..2515161) Clostridium botulinum F str. Langeland 5403813 YP_001391614.1 CDS CLI_2371 NC_009699.1 2515301 2515750 D identified by Glimmer3; hypothetical protein 2515301..2515750 Clostridium botulinum F str. Langeland 5403088 YP_001391615.1 CDS CLI_2372 NC_009699.1 2516421 2517671 R identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase complement(2516421..2517671) Clostridium botulinum F str. Langeland 5402824 YP_001391616.1 CDS CLI_2373 NC_009699.1 2517664 2518344 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator complement(2517664..2518344) Clostridium botulinum F str. Langeland 5403836 YP_001391617.1 CDS CLI_2374 NC_009699.1 2518337 2518876 R identified by match to protein family HMM PF00627; UBA/TS-N domain-containing protein complement(2518337..2518876) Clostridium botulinum F str. Langeland 5402249 YP_001391618.1 CDS CLI_2375 NC_009699.1 2519155 2519697 R identified by Glimmer3; hypothetical protein complement(2519155..2519697) Clostridium botulinum F str. Langeland 5405122 YP_001391619.1 CDS CLI_2376 NC_009699.1 2520056 2520865 R hypothetical protein complement(2520056..2520865) Clostridium botulinum F str. Langeland 5404403 YP_001391620.1 CDS CLI_2377 NC_009699.1 2521166 2521426 D hypothetical protein 2521166..2521426 Clostridium botulinum F str. Langeland 5402665 YP_001391621.1 CDS CLI_2378 NC_009699.1 2521423 2521860 D DNA-binding protein 2521423..2521860 Clostridium botulinum F str. Langeland 5402762 YP_001391622.1 CDS CLI_2379 NC_009699.1 2522013 2523047 R identified by Glimmer3; hypothetical protein complement(2522013..2523047) Clostridium botulinum F str. Langeland 5404326 YP_001391623.1 CDS CLI_2380 NC_009699.1 2523463 2523933 D identified by Glimmer3; hypothetical protein 2523463..2523933 Clostridium botulinum F str. Langeland 5405099 YP_001391624.1 CDS CLI_2381 NC_009699.1 2524431 2524868 R identified by similarity to GB:AAO36961.1; match to protein family HMM PF04307; hypothetical protein complement(2524431..2524868) Clostridium botulinum F str. Langeland 5403473 YP_001391625.1 CDS CLI_2382 NC_009699.1 2525101 2525859 R identified by match to protein family HMM PF00877; nlpC/P60 family protein complement(2525101..2525859) Clostridium botulinum F str. Langeland 5404871 YP_001391626.1 CDS CLI_2383 NC_009699.1 2526399 2526515 R identified by Glimmer3; hypothetical protein complement(2526399..2526515) Clostridium botulinum F str. Langeland 5403143 YP_001391627.1 CDS CLI_2385 NC_009699.1 2528317 2528559 D identified by match to protein family HMM PF01381; DNA-binding protein 2528317..2528559 Clostridium botulinum F str. Langeland 5405532 YP_001391628.1 CDS CLI_2386 NC_009699.1 2528744 2528857 D identified by Glimmer3; hypothetical protein 2528744..2528857 Clostridium botulinum F str. Langeland 5403018 YP_001391629.1 CDS CLI_2387 NC_009699.1 2528977 2529378 R identified by similarity to SP:P07945; match to protein family HMM PF00239; resolvase domain-containing protein complement(2528977..2529378) Clostridium botulinum F str. Langeland 5404172 YP_001391630.1 CDS CLI_2388 NC_009699.1 2529423 2529668 R identified by Glimmer3; hypothetical protein complement(2529423..2529668) Clostridium botulinum F str. Langeland 5405386 YP_001391631.1 CDS CLI_2389 NC_009699.1 2529674 2529865 R identified by similarity to GB:CAC97788.1; hypothetical protein complement(2529674..2529865) Clostridium botulinum F str. Langeland 5405173 YP_001391632.1 CDS CLI_2390 NC_009699.1 2530294 2531061 R identified by match to protein family HMM PF01520; match to protein family HMM PF08239; N-acetylmuramoyl-L-alanine amidase complement(2530294..2531061) Clostridium botulinum F str. Langeland 5405119 YP_001391633.1 CDS CLI_2391 NC_009699.1 2531106 2531321 R hypothetical protein complement(2531106..2531321) Clostridium botulinum F str. Langeland 5405269 YP_001391634.1 CDS CLI_2392 NC_009699.1 2531338 2531592 R hypothetical protein complement(2531338..2531592) Clostridium botulinum F str. Langeland 5402673 YP_001391635.1 CDS CLI_2393 NC_009699.1 2531613 2532368 R identified by Glimmer3; hypothetical protein complement(2531613..2532368) Clostridium botulinum F str. Langeland 5405056 YP_001391636.1 CDS CLI_2394 NC_009699.1 2532530 2532712 R identified by similarity to GB:CAJ67810.1; hypothetical protein complement(2532530..2532712) Clostridium botulinum F str. Langeland 5405580 YP_001391637.1 CDS CLI_2395 NC_009699.1 2532714 2533055 R identified by Glimmer3; hypothetical protein complement(2532714..2533055) Clostridium botulinum F str. Langeland 5403541 YP_001391638.1 CDS CLI_2396 NC_009699.1 2533067 2534248 R tail fiber protein H complement(2533067..2534248) Clostridium botulinum F str. Langeland 5404410 YP_001391639.1 CDS CLI_2397 NC_009699.1 2534252 2534878 R hypothetical protein complement(2534252..2534878) Clostridium botulinum F str. Langeland 5402928 YP_001391640.1 CDS CLI_2398 NC_009699.1 2534859 2535953 R identified by match to protein family HMM PF04865; baseplate J-like protein complement(2534859..2535953) Clostridium botulinum F str. Langeland 5404574 YP_001391641.1 CDS CLI_2399 NC_009699.1 2535954 2536361 R hypothetical protein complement(2535954..2536361) Clostridium botulinum F str. Langeland 5405164 YP_001391642.1 CDS CLI_2400 NC_009699.1 2536364 2536708 R hypothetical protein complement(2536364..2536708) Clostridium botulinum F str. Langeland 5404004 YP_001391643.1 CDS CLI_2401 NC_009699.1 2536711 2537685 R hypothetical protein complement(2536711..2537685) Clostridium botulinum F str. Langeland 5404896 YP_001391644.1 CDS CLI_2402 NC_009699.1 2537701 2538378 R identified by match to protein family HMM PF01476; lysM domain-containing protein complement(2537701..2538378) Clostridium botulinum F str. Langeland 5404970 YP_001391645.1 CDS CLI_2403 NC_009699.1 2538378 2540537 R tail length tape measure protein complement(2538378..2540537) Clostridium botulinum F str. Langeland 5402166 YP_001391646.1 CDS CLI_2404 NC_009699.1 2540595 2541356 R identified by Glimmer3; hypothetical protein complement(2540595..2541356) Clostridium botulinum F str. Langeland 5403013 YP_001391647.1 CDS CLI_2405 NC_009699.1 2541593 2542006 R hypothetical protein complement(2541593..2542006) Clostridium botulinum F str. Langeland 5402338 YP_001391648.1 CDS CLI_2406 NC_009699.1 2542024 2542488 R core tail protein complement(2542024..2542488) Clostridium botulinum F str. Langeland 5402363 YP_001391649.1 CDS CLI_2407 NC_009699.1 2542492 2543802 R hypothetical protein complement(2542492..2543802) Clostridium botulinum F str. Langeland 5404599 YP_001391650.1 CDS CLI_2408 NC_009699.1 2543804 2543974 R identified by Glimmer3; hypothetical protein complement(2543804..2543974) Clostridium botulinum F str. Langeland 5404031 YP_001391651.1 CDS CLI_2409 NC_009699.1 2543964 2544353 R hypothetical protein complement(2543964..2544353) Clostridium botulinum F str. Langeland 5403023 YP_001391652.1 CDS CLI_2410 NC_009699.1 2544404 2544568 R identified by Glimmer3; hypothetical protein complement(2544404..2544568) Clostridium botulinum F str. Langeland 5403557 YP_001391653.1 CDS CLI_2411 NC_009699.1 2544582 2545073 R hypothetical protein complement(2544582..2545073) Clostridium botulinum F str. Langeland 5403833 YP_001391654.1 CDS CLI_2412 NC_009699.1 2545073 2545456 R hypothetical protein complement(2545073..2545456) Clostridium botulinum F str. Langeland 5402770 YP_001391655.1 CDS CLI_2413 NC_009699.1 2545458 2545802 R identified by Glimmer3; hypothetical protein complement(2545458..2545802) Clostridium botulinum F str. Langeland 5403099 YP_001391656.1 CDS CLI_2414 NC_009699.1 2545816 2546781 R phage coat protein complement(2545816..2546781) Clostridium botulinum F str. Langeland 5404364 YP_001391657.1 CDS CLI_2415 NC_009699.1 2546801 2547406 R identified by match to protein family HMM PF06810; phage minor structural protein GP20 complement(2546801..2547406) Clostridium botulinum F str. Langeland 5405528 YP_001391658.1 CDS CLI_2416 NC_009699.1 2547427 2547690 R identified by similarity to SP:Q38441; hypothetical protein complement(2547427..2547690) Clostridium botulinum F str. Langeland 5405089 YP_001391659.1 CDS CLI_2417 NC_009699.1 2547707 2548075 R identified by similarity to GB:AAK79862.1; hypothetical protein complement(2547707..2548075) Clostridium botulinum F str. Langeland 5402642 YP_001391660.1 CDS CLI_2418 NC_009699.1 2548106 2548300 R identified by Glimmer3; hypothetical protein complement(2548106..2548300) Clostridium botulinum F str. Langeland 5403925 YP_001391661.1 CDS CLI_2419 NC_009699.1 2548317 2549348 R identified by match to protein family HMM PF04233; match to protein family HMM TIGR01641; SPP1 family phage head morphogenesis protein complement(2548317..2549348) Clostridium botulinum F str. Langeland 5403683 YP_001391662.1 CDS CLI_2420 NC_009699.1 2549329 2550780 R identified by match to protein family HMM PF05133; match to protein family HMM TIGR01538; SPP1 family phage portal protein complement(2549329..2550780) Clostridium botulinum F str. Langeland 5404653 YP_001391663.1 CDS CLI_2421 NC_009699.1 2550793 2552202 R identified by match to protein family HMM TIGR01630; hypothetical protein complement(2550793..2552202) Clostridium botulinum F str. Langeland 5405174 YP_001391664.1 CDS CLI_2422 NC_009699.1 2552195 2552782 R identified by match to protein family HMM PF03592; phage terminase small subunit complement(2552195..2552782) Clostridium botulinum F str. Langeland 5404756 YP_001391665.1 CDS CLI_2423 NC_009699.1 2553005 2553556 R identified by Glimmer3; hypothetical protein complement(2553005..2553556) Clostridium botulinum F str. Langeland 5404984 YP_001391666.1 CDS CLI_2424 NC_009699.1 2553543 2553920 R identified by Glimmer3; hypothetical protein complement(2553543..2553920) Clostridium botulinum F str. Langeland 5402644 YP_001391667.1 CDS CLI_2425 NC_009699.1 2553929 2555293 R identified by match to protein family HMM PF00176; SNF2 domain-containing protein complement(2553929..2555293) Clostridium botulinum F str. Langeland 5404941 YP_001391668.1 CDS CLI_2426 NC_009699.1 2555296 2555463 R identified by Glimmer3; hypothetical protein complement(2555296..2555463) Clostridium botulinum F str. Langeland 5405280 YP_001391669.1 CDS CLI_2427 NC_009699.1 2555456 2555737 R VRR-NUC domain-containing protein complement(2555456..2555737) Clostridium botulinum F str. Langeland 5405457 YP_001391670.1 CDS CLI_2428 NC_009699.1 2555892 2556032 R identified by Glimmer3; hypothetical protein complement(2555892..2556032) Clostridium botulinum F str. Langeland 5401841 YP_001391671.1 CDS CLI_2429 NC_009699.1 2555998 2558421 R identified by match to protein family HMM PF05272; virulence-associated protein E complement(2555998..2558421) Clostridium botulinum F str. Langeland 5403252 YP_001391672.1 CDS CLI_2430 NC_009699.1 2558468 2559493 R identified by similarity to GB:ABK61948.1; hypothetical protein complement(2558468..2559493) Clostridium botulinum F str. Langeland 5404875 YP_001391673.1 CDS CLI_2431 NC_009699.1 2559537 2559821 R identified by Glimmer3; hypothetical protein complement(2559537..2559821) Clostridium botulinum F str. Langeland 5405154 YP_001391674.1 CDS CLI_2432 NC_009699.1 2559860 2560090 R hypothetical protein complement(2559860..2560090) Clostridium botulinum F str. Langeland 5404038 YP_001391675.1 CDS CLI_2433 NC_009699.1 2560139 2561569 R identified by match to protein family HMM PF00145; C-5 cytosine-specific DNA methylase complement(2560139..2561569) Clostridium botulinum F str. Langeland 5405124 YP_001391676.1 CDS polA-1 NC_009699.1 2561611 2563587 R identified by similarity to SP:P06225; match to protein family HMM PF00476; DNA-directed DNA polymerase I complement(2561611..2563587) Clostridium botulinum F str. Langeland 5403848 YP_001391677.1 CDS CLI_2435 NC_009699.1 2563608 2563787 R hypothetical protein complement(2563608..2563787) Clostridium botulinum F str. Langeland 5404562 YP_001391678.1 CDS CLI_2436 NC_009699.1 2563818 2563988 R identified by Glimmer3; hypothetical protein complement(2563818..2563988) Clostridium botulinum F str. Langeland 5404190 YP_001391679.1 CDS CLI_2437 NC_009699.1 2564070 2564624 R identified by similarity to GB:ABJ60829.1; hypothetical protein complement(2564070..2564624) Clostridium botulinum F str. Langeland 5404435 YP_001391680.1 CDS CLI_2438 NC_009699.1 2564702 2565847 R identified by similarity to GB:AAW39635.1; hypothetical protein complement(2564702..2565847) Clostridium botulinum F str. Langeland 5404498 YP_001391681.1 CDS CLI_2439 NC_009699.1 2565847 2566011 R identified by Glimmer3; hypothetical protein complement(2565847..2566011) Clostridium botulinum F str. Langeland 5405514 YP_001391682.1 CDS CLI_2440 NC_009699.1 2566011 2566457 R identified by Glimmer3; hypothetical protein complement(2566011..2566457) Clostridium botulinum F str. Langeland 5404734 YP_001391683.1 CDS CLI_2441 NC_009699.1 2566503 2566757 R identified by Glimmer3; hypothetical protein complement(2566503..2566757) Clostridium botulinum F str. Langeland 5405383 YP_001391684.1 CDS CLI_2442 NC_009699.1 2566757 2567008 R identified by similarity to GB:AAL96800.1; hypothetical protein complement(2566757..2567008) Clostridium botulinum F str. Langeland 5403418 YP_001391685.1 CDS CLI_2443 NC_009699.1 2567072 2567623 R identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; sigma-70 family RNA polymerase sigma factor complement(2567072..2567623) Clostridium botulinum F str. Langeland 5403246 YP_001391686.1 CDS CLI_2444 NC_009699.1 2567828 2567986 R identified by Glimmer3; hypothetical protein complement(2567828..2567986) Clostridium botulinum F str. Langeland 5403567 YP_001391687.1 CDS CLI_2445 NC_009699.1 2567983 2568834 R hypothetical protein complement(2567983..2568834) Clostridium botulinum F str. Langeland 5402636 YP_001391688.1 CDS CLI_2446 NC_009699.1 2568896 2569039 R identified by Glimmer3; hypothetical protein complement(2568896..2569039) Clostridium botulinum F str. Langeland 5401937 YP_001391689.1 CDS CLI_2447 NC_009699.1 2569127 2569330 R identified by match to protein family HMM PF01381; DNA-binding protein complement(2569127..2569330) Clostridium botulinum F str. Langeland 5403845 YP_001391690.1 CDS CLI_2448 NC_009699.1 2569622 2569999 D identified by match to protein family HMM PF01381; DNA-binding protein 2569622..2569999 Clostridium botulinum F str. Langeland 5402648 YP_001391691.1 CDS CLI_2449 NC_009699.1 2570011 2571561 D identified by match to protein family HMM PF00239; resolvase family protein 2570011..2571561 Clostridium botulinum F str. Langeland 5404088 YP_001391692.1 CDS gidA-1 NC_009699.1 2571686 2572831 D identified by match to protein family HMM PF01134; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 2571686..2572831 Clostridium botulinum F str. Langeland 5404081 YP_001391693.1 CDS purB NC_009699.1 2572882 2574312 R Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase complement(2572882..2574312) Clostridium botulinum F str. Langeland 5403594 YP_001391694.1 CDS CLI_2452 NC_009699.1 2574550 2574771 D identified by match to protein family HMM PF04070; hypothetical protein 2574550..2574771 Clostridium botulinum F str. Langeland 5402732 YP_001391695.1 CDS ptsH NC_009699.1 2574799 2575056 R identified by match to protein family HMM PF00381; match to protein family HMM TIGR01003; phosphocarrier protein HPr complement(2574799..2575056) Clostridium botulinum F str. Langeland 5405285 YP_001391696.1 CDS aspB-3 NC_009699.1 2575167 2576360 R catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase complement(2575167..2576360) Clostridium botulinum F str. Langeland 5402342 YP_001391697.1 CDS CLI_2455 NC_009699.1 2576505 2576861 R identified by match to protein family HMM PF00892; match to protein family HMM PF00893; hypothetical protein complement(2576505..2576861) Clostridium botulinum F str. Langeland 5403858 YP_001391698.1 CDS CLI_2456 NC_009699.1 2576858 2578141 R hypothetical protein complement(2576858..2578141) Clostridium botulinum F str. Langeland 5403120 YP_001391699.1 CDS CLI_2457 NC_009699.1 2578160 2579026 R catalyzes the formation of decaprenylphosphoryl-5-phosphoribose from phosphoribose diphosphate and decaprenyl phosphate; phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase complement(2578160..2579026) Clostridium botulinum F str. Langeland 5404189 YP_001391700.1 CDS spoVS NC_009699.1 2579189 2579449 R identified by match to protein family HMM PF04232; stage V sporulation protein S complement(2579189..2579449) Clostridium botulinum F str. Langeland 5404343 YP_001391701.1 CDS CLI_2459 NC_009699.1 2579588 2581129 R protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP; phosphodiesterase complement(2579588..2581129) Clostridium botulinum F str. Langeland 5405462 YP_001391702.1 CDS recA NC_009699.1 2581364 2582422 R catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A complement(2581364..2582422) Clostridium botulinum F str. Langeland 5402423 YP_001391703.1 CDS pgsA NC_009699.1 2582570 2583154 R identified by match to protein family HMM PF01066; match to protein family HMM TIGR00560; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase complement(2582570..2583154) Clostridium botulinum F str. Langeland 5404792 YP_001391704.1 CDS CLI_2462 NC_009699.1 2583138 2584475 R identified by match to protein family HMM PF00919; match to protein family HMM PF01938; match to protein family HMM PF04055; match to protein family HMM TIGR00089; match to protein family HMM TIGR01125; RNA modification protein complement(2583138..2584475) Clostridium botulinum F str. Langeland 5405425 YP_001391705.1 CDS ftsK NC_009699.1 2584570 2586846 R identified by match to protein family HMM PF01580; DNA translocase FtsK/SpoIIIE complement(2584570..2586846) Clostridium botulinum F str. Langeland 5405487 YP_001391706.1 CDS clpP-1 NC_009699.1 2587327 2588019 R identified by match to protein family HMM PF00574; Clp protease complement(2587327..2588019) Clostridium botulinum F str. Langeland 5402025 YP_001391707.1 CDS dapG NC_009699.1 2588267 2589472 R catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; diaminopimelate sensitive; aspartate kinase complement(2588267..2589472) Clostridium botulinum F str. Langeland 5402869 YP_001391708.1 CDS CLI_2466 NC_009699.1 2589488 2589760 R identified by match to protein family HMM PF05239; match to protein family HMM TIGR02888; PRC-barrel domain-containing protein complement(2589488..2589760) Clostridium botulinum F str. Langeland 5405155 YP_001391709.1 CDS CLI_2467 NC_009699.1 2589837 2591138 R identified by match to protein family HMM PF00675; match to protein family HMM PF05193; M16 family peptidase complement(2589837..2591138) Clostridium botulinum F str. Langeland 5405307 YP_001391710.1 CDS pnpA NC_009699.1 2591313 2593421 R identified by match to protein family HMM PF00013; match to protein family HMM PF00575; match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM PF03726; polynucleotide phosphorylase complement(2591313..2593421) Clostridium botulinum F str. Langeland 5404359 YP_001391711.1 CDS rpsO NC_009699.1 2593685 2593999 R primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 complement(2593685..2593999) Clostridium botulinum F str. Langeland 5405338 YP_001391712.1 CDS ribF NC_009699.1 2594081 2595001 R catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase complement(2594081..2595001) Clostridium botulinum F str. Langeland 5402336 YP_001391713.1 CDS truB NC_009699.1 2595014 2595883 R catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B complement(2595014..2595883) Clostridium botulinum F str. Langeland 5403421 YP_001391714.1 CDS CLI_2472 NC_009699.1 2595884 2596846 R identified by match to protein family HMM PF01368; match to protein family HMM PF02272; DHH family protein complement(2595884..2596846) Clostridium botulinum F str. Langeland 5404994 YP_001391715.1 CDS rbfA NC_009699.1 2596836 2597198 R associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A complement(2596836..2597198) Clostridium botulinum F str. Langeland 5402533 YP_001391716.1 CDS infB NC_009699.1 2597229 2599295 R Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 complement(2597229..2599295) Clostridium botulinum F str. Langeland 5402599 YP_001391717.1 CDS CLI_2475 NC_009699.1 2599313 2599630 R identified by match to protein family HMM PF01248; ribosomal protein L7Ae family protein complement(2599313..2599630) Clostridium botulinum F str. Langeland 5403121 YP_001391718.1 CDS CLI_2476 NC_009699.1 2599617 2599889 R identified by match to protein family HMM PF04296; hypothetical protein complement(2599617..2599889) Clostridium botulinum F str. Langeland 5404972 YP_001391719.1 CDS nusA NC_009699.1 2599951 2601270 R modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA complement(2599951..2601270) Clostridium botulinum F str. Langeland 5403047 YP_001391720.1 CDS CLI_2478 NC_009699.1 2601287 2601748 R in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein complement(2601287..2601748) Clostridium botulinum F str. Langeland 5404162 YP_001391721.1 CDS polC NC_009699.1 2602053 2606351 R catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; required for leading strand synthesis; PolC exhibits 3' to 5' exonuclease activity; DNA polymerase III PolC complement(2602053..2606351) Clostridium botulinum F str. Langeland 5402198 YP_001391722.1 CDS ispG NC_009699.1 2606630 2607679 R catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase complement(2606630..2607679) Clostridium botulinum F str. Langeland 5405369 YP_001391723.1 CDS CLI_2481 NC_009699.1 2607820 2608830 R identified by match to protein family HMM PF02163; match to protein family HMM TIGR00054; membrane-associated zinc metalloprotease complement(2607820..2608830) Clostridium botulinum F str. Langeland 5403884 YP_001391724.1 CDS dxr NC_009699.1 2608875 2610032 R catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase complement(2608875..2610032) Clostridium botulinum F str. Langeland 5403952 YP_001391725.1 CDS CLI_2483 NC_009699.1 2610069 2610710 R hypothetical protein complement(2610069..2610710) Clostridium botulinum F str. Langeland 5402922 YP_001391726.1 CDS CLI_2484 NC_009699.1 2611149 2611271 R identified by Glimmer3; hypothetical protein complement(2611149..2611271) Clostridium botulinum F str. Langeland 5405103 YP_001391727.1 CDS CLI_2485 NC_009699.1 2611329 2611517 R identified by Glimmer3; hypothetical protein complement(2611329..2611517) Clostridium botulinum F str. Langeland 5403205 YP_001391728.1 CDS cdsA NC_009699.1 2611702 2612499 R identified by match to protein family HMM PF01148; phosphatidate cytidylyltransferase complement(2611702..2612499) Clostridium botulinum F str. Langeland 5405276 YP_001391729.1 CDS uppS NC_009699.1 2612524 2613282 R catalyzes the formation of UDP pyrophosphate from isopentenyl pyrophosphate; UDP pyrophosphate synthase complement(2612524..2613282) Clostridium botulinum F str. Langeland 5404754 YP_001391730.1 CDS frr NC_009699.1 2613348 2613902 R Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor complement(2613348..2613902) Clostridium botulinum F str. Langeland 5402979 YP_001391731.1 CDS pyrH NC_009699.1 2613918 2614634 R Catalyzes the phosphorylation of UMP to UDP; uridylate kinase complement(2613918..2614634) Clostridium botulinum F str. Langeland 5403310 YP_001391732.1 CDS tsf NC_009699.1 2615009 2615932 R EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts complement(2615009..2615932) Clostridium botulinum F str. Langeland 5405189 YP_001391733.1 CDS rpsB NC_009699.1 2616020 2616721 R one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 complement(2616020..2616721) Clostridium botulinum F str. Langeland 5402891 YP_001391734.1 CDS codY NC_009699.1 2616958 2617734 R CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase (By similarity). It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; transcriptional repressor CodY complement(2616958..2617734) Clostridium botulinum F str. Langeland 5404064 YP_001391735.1 CDS topA NC_009699.1 2617941 2620031 R catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I complement(2617941..2620031) Clostridium botulinum F str. Langeland 5403934 YP_001391736.1 CDS dprA NC_009699.1 2620415 2621500 R identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732; DNA protecting protein DprA complement(2620415..2621500) Clostridium botulinum F str. Langeland 5403666 YP_001391737.1 CDS CLI_2495 NC_009699.1 2621700 2623223 D identified by match to protein family HMM PF01078; match to protein family HMM TIGR00368; Mg chelatase-like protein 2621700..2623223 Clostridium botulinum F str. Langeland 5405252 YP_001391738.1 CDS CLI_2496 NC_009699.1 2623239 2623610 D identified by match to protein family HMM PF02021; match to protein family HMM TIGR00252; hypothetical protein 2623239..2623610 Clostridium botulinum F str. Langeland 5403042 YP_001391739.1 CDS rnhB NC_009699.1 2623693 2624502 R RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII complement(2623693..2624502) Clostridium botulinum F str. Langeland 5402005 YP_001391740.1 CDS rbgA NC_009699.1 2624799 2625677 R essential GTPase; functions in ribosome assembly; binds a unique part of the 23S rRNA; interacts with ribosomal protein L25(Ctc); ribosomal biogenesis GTPase complement(2624799..2625677) Clostridium botulinum F str. Langeland 5404242 YP_001391741.1 CDS lepB-2 NC_009699.1 2625982 2626506 R identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227; signal peptidase I complement(2625982..2626506) Clostridium botulinum F str. Langeland 5405216 YP_001391742.1 CDS rplS NC_009699.1 2626565 2626909 R this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 complement(2626565..2626909) Clostridium botulinum F str. Langeland 5402368 YP_001391743.1 CDS trmD NC_009699.1 2627060 2627782 R methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase complement(2627060..2627782) Clostridium botulinum F str. Langeland 5403148 YP_001391744.1 CDS rimM NC_009699.1 2627773 2628267 R Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM complement(2627773..2628267) Clostridium botulinum F str. Langeland 5405017 YP_001391745.1 CDS CLI_2503 NC_009699.1 2628380 2628607 R hypothetical protein complement(2628380..2628607) Clostridium botulinum F str. Langeland 5403197 YP_001391746.1 CDS rpsP NC_009699.1 2628628 2628876 R binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 complement(2628628..2628876) Clostridium botulinum F str. Langeland 5405145 YP_001391747.1 CDS ffh NC_009699.1 2628907 2630256 R identified by match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM PF02978; match to protein family HMM TIGR00959; signal recognition particle protein complement(2628907..2630256) Clostridium botulinum F str. Langeland 5403528 YP_001391748.1 CDS CLI_2506 NC_009699.1 2630269 2630601 R identified by match to protein family HMM PF04297; DNA-binding protein complement(2630269..2630601) Clostridium botulinum F str. Langeland 5403037 YP_001391749.1 CDS ftsY NC_009699.1 2630825 2631736 R identified by match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM TIGR00064; signal recognition particle-docking protein FtsY complement(2630825..2631736) Clostridium botulinum F str. Langeland 5402065 YP_001391750.1 CDS smc NC_009699.1 2631899 2635480 R identified by match to protein family HMM PF06470; match to protein family HMM TIGR00650; match to protein family HMM TIGR02168; chromosome segregation protein SMC complement(2631899..2635480) Clostridium botulinum F str. Langeland 5403251 YP_001391751.1 CDS CLI_2509 NC_009699.1 2635493 2635624 R identified by Glimmer3; hypothetical protein complement(2635493..2635624) Clostridium botulinum F str. Langeland 5404549 YP_001391752.1 CDS CLI_2510 NC_009699.1 2635745 2636836 R identified by match to protein family HMM PF04055; radical SAM domain-containing protein complement(2635745..2636836) Clostridium botulinum F str. Langeland 5405553 YP_001391753.1 CDS rnc NC_009699.1 2636829 2637533 R cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III complement(2636829..2637533) Clostridium botulinum F str. Langeland 5405432 YP_001391754.1 CDS acpP NC_009699.1 2637658 2637891 R carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein complement(2637658..2637891) Clostridium botulinum F str. Langeland 5405012 YP_001391755.1 CDS plsX NC_009699.1 2637969 2638976 R involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX complement(2637969..2638976) Clostridium botulinum F str. Langeland 5405398 YP_001391756.1 CDS rpmF NC_009699.1 2639066 2639248 R some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 complement(2639066..2639248) Clostridium botulinum F str. Langeland 5405318 YP_001391757.1 CDS CLI_2515 NC_009699.1 2639262 2639762 R identified by match to protein family HMM PF02620; ribosomal protein L32 family protein complement(2639262..2639762) Clostridium botulinum F str. Langeland 5405028 YP_001391758.1 CDS ackA NC_009699.1 2639880 2641073 R AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase complement(2639880..2641073) Clostridium botulinum F str. Langeland 5405090 YP_001391759.1 CDS eutD NC_009699.1 2641211 2642209 R in Salmonella this enzyme is required for ethanolamine catabolism; has higher affinity for CoA than Pta; phosphotransacetylase complement(2641211..2642209) Clostridium botulinum F str. Langeland 5402875 YP_001391760.1 CDS CLI_2518 NC_009699.1 2642543 2643421 R hypothetical protein complement(2642543..2643421) Clostridium botulinum F str. Langeland 5402440 YP_001391761.1 CDS CLI_2520 NC_009699.1 2643788 2644507 R Selenoprotein. identified by similarity to GB:CAB38127.2; D-proline reductase subunit PrdB complement(2643788..2644507) Clostridium botulinum F str. Langeland 5402090 YP_001391762.1 CDS CLI_2521 NC_009699.1 2644537 2644812 R identified by Glimmer3; hypothetical protein complement(2644537..2644812) Clostridium botulinum F str. Langeland 5403561 YP_001391763.1 CDS prdA NC_009699.1 2644821 2646935 R identified by match to protein family HMM PF09338; D-proline reductase subunit PrdA complement(2644821..2646935) Clostridium botulinum F str. Langeland 5402398 YP_001391764.1 CDS CLI_2525 NC_009699.1 2649272 2650168 R hypothetical protein complement(2649272..2650168) Clostridium botulinum F str. Langeland 5404229 YP_001391765.1 CDS CLI_2526 NC_009699.1 2650478 2652496 R identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF02743; methyl-accepting chemotaxis protein complement(2650478..2652496) Clostridium botulinum F str. Langeland 5403055 YP_001391766.1 CDS CLI_2528 NC_009699.1 2653518 2654603 R hypothetical protein complement(2653518..2654603) Clostridium botulinum F str. Langeland 5405322 YP_001391767.1 CDS CLI_2529 NC_009699.1 2654672 2655748 R hypothetical protein complement(2654672..2655748) Clostridium botulinum F str. Langeland 5402145 YP_001391768.1 CDS CLI_2530 NC_009699.1 2655965 2656162 R identified by Glimmer3; hypothetical protein complement(2655965..2656162) Clostridium botulinum F str. Langeland 5402504 YP_001391769.1 CDS CLI_2531 NC_009699.1 2656302 2657747 D identified by match to protein family HMM PF00324; amino acid permease 2656302..2657747 Clostridium botulinum F str. Langeland 5405156 YP_001391770.1 CDS CLI_2532 NC_009699.1 2657900 2658769 R hypothetical protein complement(2657900..2658769) Clostridium botulinum F str. Langeland 5404973 YP_001391771.1 CDS CLI_2533 NC_009699.1 2659294 2660301 R identified by match to protein family HMM PF05544; proline racemase complement(2659294..2660301) Clostridium botulinum F str. Langeland 5404327 YP_001391772.1 CDS prdE NC_009699.1 2660316 2660786 R PrdE protein complement(2660316..2660786) Clostridium botulinum F str. Langeland 5404228 YP_001391774.1 CDS prdB-1 NC_009699.1 2661917 2662642 R Selenoprotein. identified by similarity to GB:CAB38127.2; D-proline reductase subunit PrdB complement(2661917..2662642) Clostridium botulinum F str. Langeland 5403036 YP_001391775.1 CDS CLI_2538 NC_009699.1 2662718 2662993 R identified by Glimmer3; hypothetical protein complement(2662718..2662993) Clostridium botulinum F str. Langeland 5404365 YP_001391776.1 CDS CLI_2539 NC_009699.1 2663002 2665110 R identified by match to protein family HMM PF09338; D-proline reductase subunit PrdA complement(2663002..2665110) Clostridium botulinum F str. Langeland 5403817 YP_001391777.1 CDS CLI_2542 NC_009699.1 2667092 2667754 R identified by Glimmer3; hypothetical protein complement(2667092..2667754) Clostridium botulinum F str. Langeland 5404592 YP_001391778.1 CDS CLI_2543 NC_009699.1 2667794 2669098 R identified by match to protein family HMM PF01512; electron transport protein complement(2667794..2669098) Clostridium botulinum F str. Langeland 5405029 YP_001391779.1 CDS CLI_2544 NC_009699.1 2669097 2669213 D identified by Glimmer3; hypothetical protein 2669097..2669213 Clostridium botulinum F str. Langeland 5403491 YP_001391780.1 CDS CLI_2545 NC_009699.1 2669530 2670057 R hypothetical protein complement(2669530..2670057) Clostridium botulinum F str. Langeland 5402103 YP_001391781.1 CDS CLI_2546 NC_009699.1 2670062 2670541 R hypothetical protein complement(2670062..2670541) Clostridium botulinum F str. Langeland 5405403 YP_001391782.1 CDS CLI_2547 NC_009699.1 2670645 2670944 R identified by Glimmer3; hypothetical protein complement(2670645..2670944) Clostridium botulinum F str. Langeland 5403272 YP_001391783.1 CDS CLI_2548 NC_009699.1 2671018 2671446 R PrdA domain-containing protein complement(2671018..2671446) Clostridium botulinum F str. Langeland 5403182 YP_001391784.1 CDS CLI_2549 NC_009699.1 2671477 2672787 R identified by match to protein family HMM PF01512; electron transport protein complement(2671477..2672787) Clostridium botulinum F str. Langeland 5402562 YP_001391785.1 CDS CLI_2550 NC_009699.1 2672963 2674717 R identified by match to protein family HMM PF00158; match to protein family HMM PF00571; match to protein family HMM PF00989; match to protein family HMM PF02954; match to protein family HMM PF08448; match to protein family HMM TIGR00229; sensory box sigma-54 dependent transcriptional regulator complement(2672963..2674717) Clostridium botulinum F str. Langeland 5402918 YP_001391786.1 CDS CLI_2551 NC_009699.1 2675053 2676282 D identified by match to protein family HMM PF05636; hypothetical protein 2675053..2676282 Clostridium botulinum F str. Langeland 5403588 YP_001391787.1 CDS CLI_2552 NC_009699.1 2676342 2677508 D identified by match to protein family HMM PF07670; match to protein family HMM TIGR02871; nucleoside recognition domain-containing protein 2676342..2677508 Clostridium botulinum F str. Langeland 5404679 YP_001391788.1 CDS CLI_2553 NC_009699.1 2677509 2678033 R hypothetical protein complement(2677509..2678033) Clostridium botulinum F str. Langeland 5405630 YP_001391789.1 CDS coaD NC_009699.1 2678046 2678540 R Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase complement(2678046..2678540) Clostridium botulinum F str. Langeland 5404113 YP_001391790.1 CDS CLI_2555 NC_009699.1 2678542 2679099 R identified by match to protein family HMM PF03602; match to protein family HMM TIGR00095; methyltransferase complement(2678542..2679099) Clostridium botulinum F str. Langeland 5404687 YP_001391791.1 CDS recG NC_009699.1 2679361 2681400 R catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG complement(2679361..2681400) Clostridium botulinum F str. Langeland 5404707 YP_001391792.1 CDS CLI_2557 NC_009699.1 2681740 2683365 R identified by match to protein family HMM PF02734; DAK2 domain-containing protein complement(2681740..2683365) Clostridium botulinum F str. Langeland 5404181 YP_001391793.1 CDS CLI_2558 NC_009699.1 2683380 2683730 R identified by match to protein family HMM PF03780; hypothetical protein complement(2683380..2683730) Clostridium botulinum F str. Langeland 5404797 YP_001391794.1 CDS rpmB NC_009699.1 2683930 2684121 D required for 70S ribosome assembly; 50S ribosomal protein L28 2683930..2684121 Clostridium botulinum F str. Langeland 5404304 YP_001391795.1 CDS CLI_2560 NC_009699.1 2684170 2684289 R identified by Glimmer3; hypothetical protein complement(2684170..2684289) Clostridium botulinum F str. Langeland 5403115 YP_001391796.1 CDS CLI_2561 NC_009699.1 2684367 2684522 R hypothetical protein complement(2684367..2684522) Clostridium botulinum F str. Langeland 5402044 YP_001391797.1 CDS CLI_2562 NC_009699.1 2684951 2685595 R identified by match to protein family HMM PF04263; match to protein family HMM TIGR01378; thiamine pyrophosphokinase complement(2684951..2685595) Clostridium botulinum F str. Langeland 5402966 YP_001391798.1 CDS rpe NC_009699.1 2685597 2686247 R catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; ribulose-phosphate 3-epimerase complement(2685597..2686247) Clostridium botulinum F str. Langeland 5402789 YP_001391799.1 CDS rsgA NC_009699.1 2686241 2687119 R EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase complement(2686241..2687119) Clostridium botulinum F str. Langeland 5403282 YP_001391800.1 CDS CLI_2565 NC_009699.1 2687326 2689284 R identified by match to protein family HMM PF00069; match to protein family HMM PF03793; match to protein family HMM PF07714; protein kinase complement(2687326..2689284) Clostridium botulinum F str. Langeland 5402955 YP_001391801.1 CDS CLI_2566 NC_009699.1 2689262 2690011 R identified by match to protein family HMM PF00481; protein phosphatase family protein complement(2689262..2690011) Clostridium botulinum F str. Langeland 5403432 YP_001391802.1 CDS CLI_2567 NC_009699.1 2690030 2691058 R 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N complement(2690030..2691058) Clostridium botulinum F str. Langeland 5405511 YP_001391803.1 CDS sun NC_009699.1 2691070 2692398 R identified by match to protein family HMM PF01029; match to protein family HMM PF01189; match to protein family HMM TIGR00563; ribosomal RNA small subunit methyltransferase B complement(2691070..2692398) Clostridium botulinum F str. Langeland 5403332 YP_001391804.1 CDS CLI_2569 NC_009699.1 2692419 2693135 R identified by match to protein family HMM PF04298; neutral zinc metallopeptidase complement(2692419..2693135) Clostridium botulinum F str. Langeland 5403739 YP_001391805.1 CDS fmt NC_009699.1 2693453 2694394 R modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase complement(2693453..2694394) Clostridium botulinum F str. Langeland 5404411 YP_001391806.1 CDS def NC_009699.1 2694411 2694854 R cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase complement(2694411..2694854) Clostridium botulinum F str. Langeland 5405593 YP_001391807.1 CDS priA NC_009699.1 2694882 2697089 R binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA complement(2694882..2697089) Clostridium botulinum F str. Langeland 5404166 YP_001391808.1 CDS coaBC NC_009699.1 2697228 2698415 R catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase complement(2697228..2698415) Clostridium botulinum F str. Langeland 5402190 YP_001391809.1 CDS rpoZ NC_009699.1 2698417 2698635 R Promotes RNA polymerase assembly; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega complement(2698417..2698635) Clostridium botulinum F str. Langeland 5401994 YP_001391810.1 CDS gmk NC_009699.1 2698616 2699245 R Essential for recycling GMP and indirectly, cGMP; guanylate kinase complement(2698616..2699245) Clostridium botulinum F str. Langeland 5403551 YP_001391811.1 CDS CLI_2576 NC_009699.1 2699245 2699520 R identified by match to protein family HMM PF04025; hypothetical protein complement(2699245..2699520) Clostridium botulinum F str. Langeland 5403171 YP_001391812.1 CDS CLI_2577 NC_009699.1 2699536 2700414 R identified by match to protein family HMM PF03755; match to protein family HMM PF08340; match to protein family HMM TIGR00255; hypothetical protein complement(2699536..2700414) Clostridium botulinum F str. Langeland 5402952 YP_001391813.1 CDS ansA NC_009699.1 2700608 2701609 R identified by match to protein family HMM PF00710; type II L-asparaginase complement(2700608..2701609) Clostridium botulinum F str. Langeland 5401913 YP_001391814.1 CDS spoIVA NC_009699.1 2702589 2704070 R identified by match to protein family HMM TIGR02836; stage IV sporulation protein A complement(2702589..2704070) Clostridium botulinum F str. Langeland 5403433 YP_001391815.1 CDS CLI_2580 NC_009699.1 2704355 2704693 D identified by Glimmer3; hypothetical protein 2704355..2704693 Clostridium botulinum F str. Langeland 5402836 YP_001391816.1 CDS gpsA NC_009699.1 2704763 2705761 R catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase complement(2704763..2705761) Clostridium botulinum F str. Langeland 5404974 YP_001391817.1 CDS engA NC_009699.1 2705932 2707251 R EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA complement(2705932..2707251) Clostridium botulinum F str. Langeland 5403101 YP_001391818.1 CDS CLI_2583 NC_009699.1 2707254 2708588 R identified by match to protein family HMM PF04459; hypothetical protein complement(2707254..2708588) Clostridium botulinum F str. Langeland 5402942 YP_001391819.1 CDS phoU NC_009699.1 2709039 2709692 R identified by match to protein family HMM PF01895; match to protein family HMM TIGR02135; phosphate transport system regulatory protein PhoU complement(2709039..2709692) Clostridium botulinum F str. Langeland 5401948 YP_001391820.1 CDS pstB NC_009699.1 2709722 2710471 R ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein complement(2709722..2710471) Clostridium botulinum F str. Langeland 5403285 YP_001391821.1 CDS pstA NC_009699.1 2710484 2711368 R identified by match to protein family HMM PF00528; match to protein family HMM TIGR00974; phosphate ABC transporter permease complement(2710484..2711368) Clostridium botulinum F str. Langeland 5405370 YP_001391822.1 CDS pstC NC_009699.1 2711368 2712291 R identified by match to protein family HMM PF00528; match to protein family HMM TIGR02138; phosphate ABC transporter, permease PstC complement(2711368..2712291) Clostridium botulinum F str. Langeland 5405037 YP_001391823.1 CDS pstS NC_009699.1 2712499 2713371 R identified by match to protein family HMM PF01547; match to protein family HMM TIGR02136; phosphate ABC transporter, phosphate-binding protein complement(2712499..2713371) Clostridium botulinum F str. Langeland 5402940 YP_001391824.1 CDS CLI_2589 NC_009699.1 2713618 2715327 R identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM TIGR00229; phosphate regulon sensor protein complement(2713618..2715327) Clostridium botulinum F str. Langeland 5402030 YP_001391825.1 CDS CLI_2590 NC_009699.1 2715339 2716037 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; phosphate regulon DNA-binding response regulator complement(2715339..2716037) Clostridium botulinum F str. Langeland 5405476 YP_001391826.1 CDS CLI_2591 NC_009699.1 2716048 2716767 R identified by match to protein family HMM PF02578; match to protein family HMM TIGR00726; hypothetical protein complement(2716048..2716767) Clostridium botulinum F str. Langeland 5403359 YP_001391827.1 CDS nrdR NC_009699.1 2717217 2717672 R identified by match to protein family HMM PF03477; match to protein family HMM TIGR00244; transcriptional regulator NrdR complement(2717217..2717672) Clostridium botulinum F str. Langeland 5405472 YP_001391828.1 CDS CLI_2593 NC_009699.1 2717803 2718066 R identified by match to protein family HMM PF05239; match to protein family HMM TIGR02888; PRC-barrel domain-containing protein complement(2717803..2718066) Clostridium botulinum F str. Langeland 5403731 YP_001391829.1 CDS sigG NC_009699.1 2718213 2718986 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed after engulfment; this factor is involved in the transcription of small acid-soluble proteins involved in protecting the forespore chromatin; sporulation sigma factor SigG complement(2718213..2718986) Clostridium botulinum F str. Langeland 5403558 YP_001391830.1 CDS sigE NC_009699.1 2719061 2719768 R sigma-29; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the mother cell at the onset of sporulation; sporulation sigma factor SigE complement(2719061..2719768) Clostridium botulinum F str. Langeland 5401852 YP_001391831.1 CDS spoIIGA NC_009699.1 2719780 2720577 R identified by match to protein family HMM PF03419; match to protein family HMM TIGR02854; sporulation factor SpoIIGA complement(2719780..2720577) Clostridium botulinum F str. Langeland 5402881 YP_001391832.1 CDS ftsZ NC_009699.1 2720890 2721999 R GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ complement(2720890..2721999) Clostridium botulinum F str. Langeland 5405589 YP_001391833.1 CDS ftsA NC_009699.1 2722022 2723275 R identified by match to protein family HMM PF02491; match to protein family HMM TIGR01174; cell division protein FtsA complement(2722022..2723275) Clostridium botulinum F str. Langeland 5402414 YP_001391834.1 CDS CLI_2599 NC_009699.1 2723432 2724706 R identified by match to protein family HMM PF00535; glycosyl transferase family protein complement(2723432..2724706) Clostridium botulinum F str. Langeland 5402243 YP_001391835.1 CDS CLI_2600 NC_009699.1 2725144 2725287 D identified by Glimmer3; hypothetical protein 2725144..2725287 Clostridium botulinum F str. Langeland 5404617 YP_001391836.1 CDS pilT NC_009699.1 2725365 2726417 R identified by match to protein family HMM PF00437; match to protein family HMM TIGR01420; twitching motility protein complement(2725365..2726417) Clostridium botulinum F str. Langeland 5405459 YP_001391837.1 CDS aroE NC_009699.1 2726419 2727195 R identified by match to protein family HMM PF01488; match to protein family HMM PF08501; shikimate 5-dehydrogenase complement(2726419..2727195) Clostridium botulinum F str. Langeland 5405239 YP_001391838.1 CDS CLI_2603 NC_009699.1 2727334 2728038 R sigma-28; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the mother cell after engulfment; sporulation sigma factor SigK complement(2727334..2728038) Clostridium botulinum F str. Langeland 5403766 YP_001391839.1 CDS CLI_2604 NC_009699.1 2728464 2728643 R hypothetical protein complement(2728464..2728643) Clostridium botulinum F str. Langeland 5404366 YP_001391840.1 CDS CLI_2605 NC_009699.1 2729088 2729225 R hypothetical protein complement(2729088..2729225) Clostridium botulinum F str. Langeland 5404398 YP_001391841.1 CDS CLI_2606 NC_009699.1 2730077 2730250 R identified by Glimmer3; hypothetical protein complement(2730077..2730250) Clostridium botulinum F str. Langeland 5404525 YP_001391842.1 CDS CLI_2607 NC_009699.1 2730426 2730629 D identified by Glimmer3; hypothetical protein 2730426..2730629 Clostridium botulinum F str. Langeland 5403201 YP_001391843.1 CDS CLI_2608 NC_009699.1 2730956 2731624 R identified by match to protein family HMM TIGR02271; hypothetical protein complement(2730956..2731624) Clostridium botulinum F str. Langeland 5402026 YP_001391844.1 CDS CLI_2609 NC_009699.1 2731703 2732179 R identified by match to protein family HMM TIGR02271; hypothetical protein complement(2731703..2732179) Clostridium botulinum F str. Langeland 5405305 YP_001391845.1 CDS CLI_2611 NC_009699.1 2732668 2732784 D identified by Glimmer3; hypothetical protein 2732668..2732784 Clostridium botulinum F str. Langeland 5403577 YP_001391846.1 CDS CLI_2612 NC_009699.1 2733234 2733518 R identified by Glimmer3; hypothetical protein complement(2733234..2733518) Clostridium botulinum F str. Langeland 5405209 YP_001391847.1 CDS CLI_2613 NC_009699.1 2733529 2734332 R hypothetical protein complement(2733529..2734332) Clostridium botulinum F str. Langeland 5405110 YP_001391848.1 CDS CLI_2614 NC_009699.1 2734313 2735116 R identified by match to protein family HMM PF03837; match to protein family HMM TIGR00616; recombinase complement(2734313..2735116) Clostridium botulinum F str. Langeland 5403499 YP_001391849.1 CDS CLI_2615 NC_009699.1 2735843 2735995 D identified by Glimmer3; hypothetical protein 2735843..2735995 Clostridium botulinum F str. Langeland 5404268 YP_001391850.1 CDS CLI_2616 NC_009699.1 2736213 2737883 R identified by match to protein family HMM PF00905; penicillin-binding protein complement(2736213..2737883) Clostridium botulinum F str. Langeland 5404723 YP_001391851.1 CDS udk NC_009699.1 2737969 2738589 R functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor; uridine kinase complement(2737969..2738589) Clostridium botulinum F str. Langeland 5403160 YP_001391852.1 CDS CLI_2618 NC_009699.1 2738737 2739963 R identified by match to protein family HMM PF01136; U32 family peptidase complement(2738737..2739963) Clostridium botulinum F str. Langeland 5405077 YP_001391853.1 CDS CLI_2619 NC_009699.1 2739956 2740612 R identified by match to protein family HMM PF01596; O-methyltransferase family protein complement(2739956..2740612) Clostridium botulinum F str. Langeland 5404227 YP_001391854.1 CDS CLI_2620 NC_009699.1 2740695 2741726 R identified by match to protein family HMM PF02618; match to protein family HMM TIGR00247; hypothetical protein complement(2740695..2741726) Clostridium botulinum F str. Langeland 5403464 YP_001391855.1 CDS typA NC_009699.1 2741804 2743630 R identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match to protein family HMM TIGR01394; GTP-binding protein TypA complement(2741804..2743630) Clostridium botulinum F str. Langeland 5405474 YP_001391856.1 CDS CLI_2622 NC_009699.1 2744276 2745985 R identified by match to protein family HMM PF00753; match to protein family HMM PF07521; match to protein family HMM TIGR00649; RNA-metabolizing metallo-beta-lactamase family protein complement(2744276..2745985) Clostridium botulinum F str. Langeland 5403772 YP_001391857.1 CDS CLI_2623 NC_009699.1 2746033 2746485 R identified by match to protein family HMM PF01475; FUR family transcriptional regulator complement(2746033..2746485) Clostridium botulinum F str. Langeland 5404867 YP_001391858.1 CDS CLI_2624 NC_009699.1 2746607 2746861 R identified by match to protein family HMM PF06949; hypothetical protein complement(2746607..2746861) Clostridium botulinum F str. Langeland 5405550 YP_001391859.1 CDS CLI_2625 NC_009699.1 2746875 2747288 R similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein complement(2746875..2747288) Clostridium botulinum F str. Langeland 5404635 YP_001391860.1 CDS CLI_2626 NC_009699.1 2747495 2747746 R identified by match to protein family HMM PF06135; hypothetical protein complement(2747495..2747746) Clostridium botulinum F str. Langeland 5402811 YP_001391861.1 CDS alaS NC_009699.1 2747861 2750500 R Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase complement(2747861..2750500) Clostridium botulinum F str. Langeland 5403445 YP_001391862.1 CDS CLI_2628 NC_009699.1 2750996 2752024 R identified by match to protein family HMM PF01594; hypothetical protein complement(2750996..2752024) Clostridium botulinum F str. Langeland 5402162 YP_001391863.1 CDS CLI_2629 NC_009699.1 2752037 2752525 R PRC-barrel domain-containing protein complement(2752037..2752525) Clostridium botulinum F str. Langeland 5402373 YP_001391864.1 CDS CLI_2630 NC_009699.1 2752707 2753135 R identified by match to protein family HMM PF01592; iron-sulfur cluster assembly protein complement(2752707..2753135) Clostridium botulinum F str. Langeland 5402611 YP_001391865.1 CDS iscS-2 NC_009699.1 2753137 2754330 R identified by match to protein family HMM PF00266; match to protein family HMM PF01212; cysteine desulfurase complement(2753137..2754330) Clostridium botulinum F str. Langeland 5404482 YP_001391866.1 CDS CLI_2632 NC_009699.1 2754323 2754769 R identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738; rrF2 family protein complement(2754323..2754769) Clostridium botulinum F str. Langeland 5404677 YP_001391867.1 CDS CLI_2633 NC_009699.1 2754989 2756239 R identified by match to protein family HMM PF00004; recombination factor protein RarA complement(2754989..2756239) Clostridium botulinum F str. Langeland 5405360 YP_001391868.1 CDS hisK NC_009699.1 2756589 2757356 R identified by match to protein family HMM PF02811; match to protein family HMM TIGR01856; histidinol-phosphatase complement(2756589..2757356) Clostridium botulinum F str. Langeland 5405057 YP_001391869.1 CDS CLI_2635 NC_009699.1 2757722 2758630 R identified by match to protein family HMM PF03547; auxin efflux carrier family protein complement(2757722..2758630) Clostridium botulinum F str. Langeland 5401987 YP_001391870.1 CDS CLI_2636 NC_009699.1 2758738 2759604 R identified by match to protein family HMM PF02645; match to protein family HMM TIGR00762; DegV family protein complement(2758738..2759604) Clostridium botulinum F str. Langeland 5405270 YP_001391871.1 CDS CLI_2637 NC_009699.1 2759932 2760516 D identified by match to protein family HMM PF01206; hypothetical protein 2759932..2760516 Clostridium botulinum F str. Langeland 5404334 YP_001391872.1 CDS CLI_2638 NC_009699.1 2760768 2761757 R catalyzes the formation of L-proline from L-ornithine; ornithine cyclodeaminase complement(2760768..2761757) Clostridium botulinum F str. Langeland 5404784 YP_001391873.1 CDS CLI_2639 NC_009699.1 2761879 2763246 R identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835; sodium:alanine symporter family protein complement(2761879..2763246) Clostridium botulinum F str. Langeland 5405451 YP_001391874.1 CDS CLI_2640 NC_009699.1 2763992 2765326 R identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835; sodium:alanine symporter family protein complement(2763992..2765326) Clostridium botulinum F str. Langeland 5404563 YP_001391875.1 CDS CLI_2641 NC_009699.1 2765702 2766355 D hypothetical protein 2765702..2766355 Clostridium botulinum F str. Langeland 5405548 YP_001391876.1 CDS CLI_2642 NC_009699.1 2766494 2766970 R copper amine oxidase domain-containing protein complement(2766494..2766970) Clostridium botulinum F str. Langeland 5404097 YP_001391877.1 CDS CLI_2643 NC_009699.1 2767335 2771096 R identified by match to protein family HMM PF02769; match to protein family HMM TIGR01857; phosphoribosylformylglycinamidine synthase complement(2767335..2771096) Clostridium botulinum F str. Langeland 5405112 YP_001391878.1 CDS CLI_2644 NC_009699.1 2771294 2772643 R identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein complement(2771294..2772643) Clostridium botulinum F str. Langeland 5405512 YP_001391879.1 CDS CLI_2645 NC_009699.1 2772640 2775117 R identified by match to protein family HMM PF00391; match to protein family HMM PF01326; phosphoenolpyruvate synthase complement(2772640..2775117) Clostridium botulinum F str. Langeland 5402638 YP_001391880.1 CDS CLI_2646 NC_009699.1 2775122 2775397 R acyl carrier protein complement(2775122..2775397) Clostridium botulinum F str. Langeland 5402867 YP_001391881.1 CDS CLI_2647 NC_009699.1 2775403 2776941 R identified by match to protein family HMM PF00501; acyl-CoA synthetase complement(2775403..2776941) Clostridium botulinum F str. Langeland 5402286 YP_001391882.1 CDS CLI_2648 NC_009699.1 2776958 2777968 R identified by match to protein family HMM PF08541; match to protein family HMM PF08545; 3-oxoacyl-(acyl-carrier-protein) synthase III complement(2776958..2777968) Clostridium botulinum F str. Langeland 5402298 YP_001391883.1 CDS CLI_2649 NC_009699.1 2777977 2778834 R bacT protein complement(2777977..2778834) Clostridium botulinum F str. Langeland 5402812 YP_001391884.1 CDS CLI_2650 NC_009699.1 2778875 2780704 R identified by match to protein family HMM PF00501; match to protein family HMM PF00550; nonribosomal peptide synthetase complement(2778875..2780704) Clostridium botulinum F str. Langeland 5405571 YP_001391885.1 CDS CLI_2651 NC_009699.1 2780744 2781256 R identified by match to protein family HMM PF00583; acetyltransferase complement(2780744..2781256) Clostridium botulinum F str. Langeland 5403550 YP_001391886.1 CDS CLI_2652 NC_009699.1 2781260 2781508 R D-alanyl carrier protein-like protein complement(2781260..2781508) Clostridium botulinum F str. Langeland 5403882 YP_001391887.1 CDS CLI_2653 NC_009699.1 2781517 2782533 R hypothetical protein complement(2781517..2782533) Clostridium botulinum F str. Langeland 5405626 YP_001391888.1 CDS CLI_2654 NC_009699.1 2782530 2783723 R seryl-tRNA synthetase complement(2782530..2783723) Clostridium botulinum F str. Langeland 5403128 YP_001391889.1 CDS CLI_2655 NC_009699.1 2783742 2784482 R identified by Glimmer3; hypothetical protein complement(2783742..2784482) Clostridium botulinum F str. Langeland 5404041 YP_001391890.1 CDS argF NC_009699.1 2784948 2785949 R catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase complement(2784948..2785949) Clostridium botulinum F str. Langeland 5401857 YP_001391891.1 CDS arcC NC_009699.1 2786044 2786988 R catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; carbamate kinase complement(2786044..2786988) Clostridium botulinum F str. Langeland 5402079 YP_001391892.1 CDS glyA NC_009699.1 2787552 2788793 R catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase complement(2787552..2788793) Clostridium botulinum F str. Langeland 5402375 YP_001391893.1 CDS CLI_2659 NC_009699.1 2788967 2789737 D identified by match to protein family HMM PF06738; hypothetical protein 2788967..2789737 Clostridium botulinum F str. Langeland 5404844 YP_001391894.1 CDS CLI_2660 NC_009699.1 2789734 2790222 D hypothetical protein 2789734..2790222 Clostridium botulinum F str. Langeland 5401884 YP_001391895.1 CDS CLI_2661 NC_009699.1 2790289 2790558 R identified by match to protein family HMM PF02583; hypothetical protein complement(2790289..2790558) Clostridium botulinum F str. Langeland 5403158 YP_001391896.1 CDS CLI_2662 NC_009699.1 2790759 2791583 R identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM PF08282; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; HAD family hydrolase complement(2790759..2791583) Clostridium botulinum F str. Langeland 5402471 YP_001391897.1 CDS CLI_2663 NC_009699.1 2791696 2792172 D lipoprotein 2791696..2792172 Clostridium botulinum F str. Langeland 5405503 YP_001391898.1 CDS CLI_2664 NC_009699.1 2792583 2797448 D identified by Glimmer3; hypothetical protein 2792583..2797448 Clostridium botulinum F str. Langeland 5402723 YP_001391899.1 CDS CLI_2665 NC_009699.1 2797525 2798748 D identified by Glimmer3; hypothetical protein 2797525..2798748 Clostridium botulinum F str. Langeland 5404741 YP_001391900.1 CDS CLI_2666 NC_009699.1 2798902 2799957 D identified by Glimmer3; hypothetical protein 2798902..2799957 Clostridium botulinum F str. Langeland 5402512 YP_001391901.1 CDS CLI_2667 NC_009699.1 2800296 2800988 D hypothetical protein 2800296..2800988 Clostridium botulinum F str. Langeland 5405348 YP_001391902.1 CDS CLI_2668 NC_009699.1 2801419 2802954 R catalyzes the removal of amino acids from the N termini of peptides; aminopeptidase 1 complement(2801419..2802954) Clostridium botulinum F str. Langeland 5402724 YP_001391903.1 CDS CLI_2669 NC_009699.1 2802945 2803880 R identified by match to protein family HMM PF01544; magnesium and cobalt transport protein CorA complement(2802945..2803880) Clostridium botulinum F str. Langeland 5404215 YP_001391904.1 CDS CLI_2670 NC_009699.1 2804309 2804863 R identified by match to protein family HMM PF01812; match to protein family HMM TIGR02727; 5-formyltetrahydrofolate cyclo-ligase complement(2804309..2804863) Clostridium botulinum F str. Langeland 5403011 YP_001391905.1 CDS hprK NC_009699.1 2804856 2805779 R catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system; HPr kinase/phosphorylase complement(2804856..2805779) Clostridium botulinum F str. Langeland 5402177 YP_001391906.1 CDS CLI_2672 NC_009699.1 2805811 2805999 R identified by match to protein family HMM PF05979; hypothetical protein complement(2805811..2805999) Clostridium botulinum F str. Langeland 5402415 YP_001391907.1 CDS CLI_2673 NC_009699.1 2806170 2806907 R identified by match to protein family HMM PF09335; DedA family protein complement(2806170..2806907) Clostridium botulinum F str. Langeland 5402443 YP_001391908.1 CDS CLI_2674 NC_009699.1 2806873 2807592 R identified by match to protein family HMM PF09335; DedA family protein complement(2806873..2807592) Clostridium botulinum F str. Langeland 5403202 YP_001391909.1 CDS CLI_2675 NC_009699.1 2807701 2808846 R identified by match to protein family HMM PF02754; hypothetical protein complement(2807701..2808846) Clostridium botulinum F str. Langeland 5404816 YP_001391910.1 CDS CLI_2676 NC_009699.1 2808846 2809844 R hypothetical protein complement(2808846..2809844) Clostridium botulinum F str. Langeland 5403837 YP_001391911.1 CDS CLI_2677 NC_009699.1 2809822 2810523 R hypothetical protein complement(2809822..2810523) Clostridium botulinum F str. Langeland 5404125 YP_001391912.1 CDS CLI_2678 NC_009699.1 2810523 2811197 R identified by match to protein family HMM PF00535; glycosyl transferase family protein complement(2810523..2811197) Clostridium botulinum F str. Langeland 5402155 YP_001391913.1 CDS CLI_2679 NC_009699.1 2811384 2812358 D identified by match to protein family HMM PF00581; thiosulfate sulfurtransferase 2811384..2812358 Clostridium botulinum F str. Langeland 5402051 YP_001391914.1 CDS glpX NC_009699.1 2812606 2813580 R type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II complement(2812606..2813580) Clostridium botulinum F str. Langeland 5403773 YP_001391915.1 CDS CLI_2681 NC_009699.1 2814064 2814240 D identified by Glimmer3; hypothetical protein 2814064..2814240 Clostridium botulinum F str. Langeland 5405426 YP_001391916.1 CDS CLI_2682 NC_009699.1 2814272 2814670 R hypothetical protein complement(2814272..2814670) Clostridium botulinum F str. Langeland 5404909 YP_001391917.1 CDS CLI_2683 NC_009699.1 2815124 2816293 R identified by match to protein family HMM PF00258; match to protein family HMM PF00753; metallo-beta-lactamase family protein/flavodoxin complement(2815124..2816293) Clostridium botulinum F str. Langeland 5405192 YP_001391918.1 CDS CLI_2684 NC_009699.1 2816789 2817295 R hypothetical protein complement(2816789..2817295) Clostridium botulinum F str. Langeland 5402548 YP_001391919.1 CDS CLI_2685 NC_009699.1 2818347 2819210 R identified by match to protein family HMM PF01156; IUNH family nucleoside hydrolase complement(2818347..2819210) Clostridium botulinum F str. Langeland 5403443 YP_001391920.1 CDS def-3 NC_009699.1 2819228 2819764 R identified by match to protein family HMM PF01327; match to protein family HMM TIGR00079; peptide deformylase complement(2819228..2819764) Clostridium botulinum F str. Langeland 5404951 YP_001391921.1 CDS CLI_2687 NC_009699.1 2819866 2820006 D identified by Glimmer3; hypothetical protein 2819866..2820006 Clostridium botulinum F str. Langeland 5403737 YP_001391922.1 CDS CLI_2688 NC_009699.1 2820227 2820877 R produces ATP from ADP in the presence of a proton gradient across the membrane; the D subunit is part of the catalytic core of the ATP synthase complex; V-type ATP synthase subunit D complement(2820227..2820877) Clostridium botulinum F str. Langeland 5404923 YP_001391923.1 CDS CLI_2689 NC_009699.1 2820906 2822291 R produces ATP from ADP in the presence of a proton gradient across the membrane; the B subunit is part of the catalytic core of the ATP synthase complex; V-type ATP synthase subunit B complement(2820906..2822291) Clostridium botulinum F str. Langeland 5402565 YP_001391924.1 CDS CLI_2690 NC_009699.1 2822284 2824062 R produces ATP from ADP in the presence of a proton gradient across the membrane; the A subunit is part of the catalytic core of the ATP synthase complex; V-type ATP synthase subunit A complement(2822284..2824062) Clostridium botulinum F str. Langeland 5401894 YP_001391925.1 CDS CLI_2691 NC_009699.1 2824076 2824384 R produces ATP from ADP in the presence of a proton gradient across the membrane; the F subunit is part of the catalytic core of the ATP synthase complex; V-type ATP synthase subunit F complement(2824076..2824384) Clostridium botulinum F str. Langeland 5404684 YP_001391926.1 CDS CLI_2692 NC_009699.1 2824377 2825378 R produces ATP from ADP in the presence of a proton gradient across the membrane; the C subunit is part of the catalytic core of the ATP synthase complex; V-type ATP synthase subunit C complement(2824377..2825378) Clostridium botulinum F str. Langeland 5405466 YP_001391927.1 CDS CLI_2693 NC_009699.1 2825393 2825992 R identified by match to protein family HMM PF01991; V-type ATPase, E subunit complement(2825393..2825992) Clostridium botulinum F str. Langeland 5402027 YP_001391928.1 CDS CLI_2694 NC_009699.1 2826031 2826507 R produces ATP from ADP in the presence of a proton gradient across the membrane; the K subunit is a nonenzymatic component which binds the dimeric form by interacting with the G and E subunits; V-type ATP synthase subunit K complement(2826031..2826507) Clostridium botulinum F str. Langeland 5402240 YP_001391929.1 CDS CLI_2695 NC_009699.1 2826520 2828481 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I is part of the membrane proton channel.; V-type ATP synthase subunit I complement(2826520..2828481) Clostridium botulinum F str. Langeland 5403581 YP_001391930.1 CDS CLI_2696 NC_009699.1 2828468 2828794 R V-type ATPase, G subunit complement(2828468..2828794) Clostridium botulinum F str. Langeland 5403886 YP_001391931.1 CDS CLI_2697 NC_009699.1 2829126 2830802 R identified by match to protein family HMM PF02310; match to protein family HMM PF04055; B12-binding Fe-S oxidoreductase complement(2829126..2830802) Clostridium botulinum F str. Langeland 5403939 YP_001391932.1 CDS CLI_2698 NC_009699.1 2830777 2831385 R hypothetical protein complement(2830777..2831385) Clostridium botulinum F str. Langeland 5401895 YP_001391933.1 CDS CLI_2699 NC_009699.1 2831524 2832243 R identified by match to protein family HMM PF00882; phospholipase C complement(2831524..2832243) Clostridium botulinum F str. Langeland 5402593 YP_001391934.1 CDS CLI_2700 NC_009699.1 2832265 2833464 R hypothetical protein complement(2832265..2833464) Clostridium botulinum F str. Langeland 5404273 YP_001391935.1 CDS CLI_2701 NC_009699.1 2833503 2836049 R identified by match to protein family HMM PF00122; match to protein family HMM PF00689; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494; ATPase P complement(2833503..2836049) Clostridium botulinum F str. Langeland 5402346 YP_001391936.1 CDS CLI_2702 NC_009699.1 2836498 2838141 D catalyzes the hydrolysis of pyrophosphate to phosphate; manganese-dependent inorganic pyrophosphatase 2836498..2838141 Clostridium botulinum F str. Langeland 5405411 YP_001391937.1 CDS CLI_2703 NC_009699.1 2838350 2838928 R identified by Glimmer3; hypothetical protein complement(2838350..2838928) Clostridium botulinum F str. Langeland 5403985 YP_001391938.1 CDS flgG NC_009699.1 2839221 2840012 R makes up the distal portion of the flagellar basal body rod; the Clostridia have 2 adjacent copies of the FlgG gene; flagellar basal body rod protein FlgG complement(2839221..2840012) Clostridium botulinum F str. Langeland 5403544 YP_001391939.1 CDS flgG NC_009699.1 2840067 2840834 R makes up the distal portion of the flagellar basal body rod; the Clostridia have two adjacent copies of the FlgG gene; flagellar basal body rod protein FlgG complement(2840067..2840834) Clostridium botulinum F str. Langeland 5404381 YP_001391940.1 CDS CLI_2706 NC_009699.1 2840900 2841016 R hypothetical protein complement(2840900..2841016) Clostridium botulinum F str. Langeland 5404793 YP_001391941.1 CDS CLI_2707 NC_009699.1 2841094 2841732 R hypothetical protein complement(2841094..2841732) Clostridium botulinum F str. Langeland 5404631 YP_001391942.1 CDS fliA NC_009699.1 2841761 2842489 R identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02479; match to protein family HMM TIGR02937; RNA polymerase sigma factor for flagellar operon FliA complement(2841761..2842489) Clostridium botulinum F str. Langeland 5405052 YP_001391943.1 CDS CLI_2709 NC_009699.1 2842503 2843162 R identified by match to protein family HMM PF07238; hypothetical protein complement(2842503..2843162) Clostridium botulinum F str. Langeland 5402233 YP_001391944.1 CDS flhG NC_009699.1 2843177 2844037 R identified by match to protein family HMM PF01656; flagellar biosynthesis protein FlhG complement(2843177..2844037) Clostridium botulinum F str. Langeland 5404002 YP_001391945.1 CDS flhF NC_009699.1 2844031 2845257 R positive regulator of class III flagellar genes; flagellar biosynthesis regulator FlhF complement(2844031..2845257) Clostridium botulinum F str. Langeland 5403920 YP_001391946.1 CDS flhA NC_009699.1 2845254 2847320 R membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA complement(2845254..2847320) Clostridium botulinum F str. Langeland 5404924 YP_001391947.1 CDS CLI_2713 NC_009699.1 2847348 2849177 R FlhB is a membrane protein responsible for substrate specificity in switching from rod/hook-type export to filament-type export; FliR is required for export of flagellar proteins, although a specific role has not yet been determined; bifunctional flagellar biosynthesis protein FliR/FlhB complement(2847348..2849177) Clostridium botulinum F str. Langeland 5405624 YP_001391948.1 CDS fliQ NC_009699.1 2849211 2849480 R identified by match to protein family HMM PF01313; match to protein family HMM TIGR01402; flagellar biosynthesis protein FliQ complement(2849211..2849480) Clostridium botulinum F str. Langeland 5404127 YP_001391949.1 CDS fliP NC_009699.1 2849492 2850268 R FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP complement(2849492..2850268) Clostridium botulinum F str. Langeland 5405499 YP_001391950.1 CDS CLI_2716 NC_009699.1 2850252 2850659 R flagellar biosynthesis domain-containing protein complement(2850252..2850659) Clostridium botulinum F str. Langeland 5402272 YP_001391951.1 CDS fliL NC_009699.1 2850732 2851253 R identified by match to protein family HMM PF03748; flagellar basal body-associated protein FliL complement(2850732..2851253) Clostridium botulinum F str. Langeland 5402594 YP_001391952.1 CDS motB-2 NC_009699.1 2851250 2851993 R identified by match to protein family HMM PF00691; chemotaxis motB protein complement(2851250..2851993) Clostridium botulinum F str. Langeland 5405642 YP_001391953.1 CDS motA-2 NC_009699.1 2851986 2852798 R identified by match to protein family HMM PF01618; chemotaxis MotA protein complement(2851986..2852798) Clostridium botulinum F str. Langeland 5402078 YP_001391954.1 CDS CLI_2720 NC_009699.1 2852795 2853004 R identified by match to protein family HMM PF06289; flagellar protein FlbD complement(2852795..2853004) Clostridium botulinum F str. Langeland 5401904 YP_001391955.1 CDS flgE NC_009699.1 2853238 2854275 R identified by match to protein family HMM PF00460; match to protein family HMM PF06429; flagellar hook protein flgE complement(2853238..2854275) Clostridium botulinum F str. Langeland 5403603 YP_001391956.1 CDS CLI_2722 NC_009699.1 2854357 2854776 R identified by match to protein family HMM TIGR02530; flagellar operon protein complement(2854357..2854776) Clostridium botulinum F str. Langeland 5404158 YP_001391957.1 CDS flgD NC_009699.1 2854791 2855612 R identified by match to protein family HMM PF03963; flagellar hook capping protein complement(2854791..2855612) Clostridium botulinum F str. Langeland 5404935 YP_001391958.1 CDS fliK NC_009699.1 2855642 2857030 R identified by match to protein family HMM PF02120; flagellar hook-length control protein complement(2855642..2857030) Clostridium botulinum F str. Langeland 5405379 YP_001391959.1 CDS CLI_2725 NC_009699.1 2857036 2857473 R identified by match to protein family HMM TIGR02473; flagellar protein FliJ complement(2857036..2857473) Clostridium botulinum F str. Langeland 5405662 YP_001391960.1 CDS fliI NC_009699.1 2857577 2858893 R identified by match to protein family HMM PF00006; match to protein family HMM PF02874; match to protein family HMM TIGR01026; match to protein family HMM TIGR02545; flagellar protein export ATPase FliI complement(2857577..2858893) Clostridium botulinum F str. Langeland 5405427 YP_001391961.1 CDS fliH NC_009699.1 2858933 2859721 R flagellar assembly protein FliH complement(2858933..2859721) Clostridium botulinum F str. Langeland 5403676 YP_001391962.1 CDS fliG NC_009699.1 2859705 2860718 R One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G complement(2859705..2860718) Clostridium botulinum F str. Langeland 5404167 YP_001391963.1 CDS fliE NC_009699.1 2862321 2862635 R forms a junction between the M-ring and FlgB during flagella biosynthesis; flagellar hook-basal body protein FliE complement(2862321..2862635) Clostridium botulinum F str. Langeland 5403966 YP_001391964.1 CDS flgC NC_009699.1 2862647 2863081 R with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC complement(2862647..2863081) Clostridium botulinum F str. Langeland 5402191 YP_001391965.1 CDS flgB NC_009699.1 2863179 2863580 R with FlgF and C makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgB complement(2863179..2863580) Clostridium botulinum F str. Langeland 5404080 YP_001391966.1 CDS CLI_2733 NC_009699.1 2864154 2865023 R identified by match to protein family HMM PF00669; match to protein family HMM PF00700; flagellin complement(2864154..2865023) Clostridium botulinum F str. Langeland 5405467 YP_001391967.1 CDS CLI_2734 NC_009699.1 2865153 2865521 R hypothetical protein complement(2865153..2865521) Clostridium botulinum F str. Langeland 5404534 YP_001391968.1 CDS argH NC_009699.1 2866062 2867384 R catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase complement(2866062..2867384) Clostridium botulinum F str. Langeland 5402857 YP_001391969.1 CDS argG NC_009699.1 2867406 2868599 R catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase complement(2867406..2868599) Clostridium botulinum F str. Langeland 5402619 YP_001391970.1 CDS CLI_2737 NC_009699.1 2868893 2869231 R hypothetical protein complement(2868893..2869231) Clostridium botulinum F str. Langeland 5402704 YP_001391971.1 CDS CLI_2738 NC_009699.1 2869254 2869598 R hypothetical protein complement(2869254..2869598) Clostridium botulinum F str. Langeland 5403225 YP_001391972.1 CDS cls NC_009699.1 2869958 2871388 R identified by match to protein family HMM PF00614; cardiolipin synthetase complement(2869958..2871388) Clostridium botulinum F str. Langeland 5403638 YP_001391973.1 CDS CLI_2740 NC_009699.1 2871715 2872605 D hypothetical protein 2871715..2872605 Clostridium botulinum F str. Langeland 5402308 YP_001391974.1 CDS CLI_2741 NC_009699.1 2872736 2872921 R hypothetical protein complement(2872736..2872921) Clostridium botulinum F str. Langeland 5402681 YP_001391975.1 CDS CLI_2742 NC_009699.1 2873216 2873665 R identified by match to protein family HMM PF04892; VanZ family protein complement(2873216..2873665) Clostridium botulinum F str. Langeland 5402035 YP_001391976.1 CDS CLI_2743 NC_009699.1 2873916 2875346 R identified by match to protein family HMM PF01943; polysaccharide biosynthesis protein complement(2873916..2875346) Clostridium botulinum F str. Langeland 5405651 YP_001391977.1 CDS CLI_2744 NC_009699.1 2875386 2876303 R identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; NAD-dependent epimerase/dehydratase family protein complement(2875386..2876303) Clostridium botulinum F str. Langeland 5405242 YP_001391978.1 CDS CLI_2745 NC_009699.1 2876332 2877399 R identified by match to protein family HMM PF03102; match to protein family HMM PF08666; neuB family protein complement(2876332..2877399) Clostridium botulinum F str. Langeland 5403979 YP_001391979.1 CDS CLI_2746 NC_009699.1 2877431 2879092 R identified by match to protein family HMM PF02348; match to protein family HMM PF04101; cytidyltransferase-like protein complement(2877431..2879092) Clostridium botulinum F str. Langeland 5403710 YP_001391980.1 CDS CLI_2747 NC_009699.1 2879107 2880276 R hypothetical protein complement(2879107..2880276) Clostridium botulinum F str. Langeland 5403559 YP_001391981.1 CDS CLI_2748 NC_009699.1 2880310 2881263 R identified by match to protein family HMM PF05855; exopolysaccharide biosynthesis protein complement(2880310..2881263) Clostridium botulinum F str. Langeland 5403368 YP_001391982.1 CDS CLI_2749 NC_009699.1 2881290 2882060 R exopolysaccharide biosynthesis protein complement(2881290..2882060) Clostridium botulinum F str. Langeland 5403382 YP_001391983.1 CDS glf NC_009699.1 2882060 2883160 R identified by match to protein family HMM PF03275; match to protein family HMM TIGR00031; UDP-galactopyranose mutase complement(2882060..2883160) Clostridium botulinum F str. Langeland 5405583 YP_001391984.1 CDS CLI_2751 NC_009699.1 2883265 2883942 R identified by match to protein family HMM PF02397; UDP-phosphate galactosephosphotransferase complement(2883265..2883942) Clostridium botulinum F str. Langeland 5402287 YP_001391985.1 CDS CLI_2752 NC_009699.1 2884153 2884863 R identified by match to protein family HMM TIGR01007; capsular exopolysaccharide family protein complement(2884153..2884863) Clostridium botulinum F str. Langeland 5404006 YP_001391986.1 CDS CLI_2753 NC_009699.1 2884882 2885655 R identified by match to protein family HMM PF02811; exopolysaccharide biosynthesis protein complement(2884882..2885655) Clostridium botulinum F str. Langeland 5404309 YP_001391987.1 CDS CLI_2754 NC_009699.1 2885660 2886343 R identified by match to protein family HMM PF02706; capsular polysaccharide biosynthsis protein complement(2885660..2886343) Clostridium botulinum F str. Langeland 5402801 YP_001391988.1 CDS CLI_2755 NC_009699.1 2886378 2887340 R identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350; cell envelope-related function transcriptional attenuator complement(2886378..2887340) Clostridium botulinum F str. Langeland 5402667 YP_001391989.1 CDS CLI_2756 NC_009699.1 2887789 2887965 R hypothetical protein complement(2887789..2887965) Clostridium botulinum F str. Langeland 5403602 YP_001391990.1 CDS CLI_2757 NC_009699.1 2888094 2888267 R identified by Glimmer3; hypothetical protein complement(2888094..2888267) Clostridium botulinum F str. Langeland 5402225 YP_001391991.1 CDS CLI_2758 NC_009699.1 2888388 2888555 R hypothetical protein complement(2888388..2888555) Clostridium botulinum F str. Langeland 5402969 YP_001391992.1 CDS CLI_2759 NC_009699.1 2889040 2889888 R identified by match to protein family HMM PF00015; methyl-accepting chemotaxis protein complement(2889040..2889888) Clostridium botulinum F str. Langeland 5404144 YP_001391993.1 CDS fliC NC_009699.1 2889965 2890783 R identified by match to protein family HMM PF00669; match to protein family HMM PF00700; flagellin complement(2889965..2890783) Clostridium botulinum F str. Langeland 5404493 YP_001391994.1 CDS CLI_2764 NC_009699.1 2892075 2892575 R identified by similarity to GB:AAO36231.1; hypothetical protein complement(2892075..2892575) Clostridium botulinum F str. Langeland 5402385 YP_001391995.1 CDS CLI_2765 NC_009699.1 2892600 2892725 R identified by Glimmer3; hypothetical protein complement(2892600..2892725) Clostridium botulinum F str. Langeland 5404770 YP_001391996.1 CDS CLI_2767 NC_009699.1 2894190 2894441 R identified by Glimmer3; hypothetical protein complement(2894190..2894441) Clostridium botulinum F str. Langeland 5403303 YP_001391997.1 CDS CLI_2769 NC_009699.1 2895105 2896202 R identified by match to protein family HMM PF01041; match to protein family HMM PF01053; match to protein family HMM PF01212; aminotransferase complement(2895105..2896202) Clostridium botulinum F str. Langeland 5404300 YP_001391998.1 CDS CLI_2770 NC_009699.1 2896279 2897271 R identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; polysaccharide biosynthesis protein complement(2896279..2897271) Clostridium botulinum F str. Langeland 5402307 YP_001391999.1 CDS CLI_2771 NC_009699.1 2897297 2897935 R identified by match to protein family HMM PF00132; hexapeptide repeat-containing transferase complement(2897297..2897935) Clostridium botulinum F str. Langeland 5404185 YP_001392000.1 CDS CLI_2772 NC_009699.1 2897954 2898619 R identified by match to protein family HMM PF02585; N-acetylglucosaminylphosphatidylinositol deacetylase family protein complement(2897954..2898619) Clostridium botulinum F str. Langeland 5403009 YP_001392001.1 CDS CLI_2773 NC_009699.1 2898624 2899334 R identified by similarity to SP:P0A0Z8; match to protein family HMM PF02348; N-acylneuraminate cytidylyltransferase complement(2898624..2899334) Clostridium botulinum F str. Langeland 5405217 YP_001392002.1 CDS CLI_2774 NC_009699.1 2899359 2900450 R identified by similarity to GB:ABM40074.1; match to protein family HMM PF02655; hypothetical protein complement(2899359..2900450) Clostridium botulinum F str. Langeland 5404892 YP_001392003.1 CDS CLI_2775 NC_009699.1 2900440 2901471 R identified by match to protein family HMM PF03102; match to protein family HMM PF08666; NeuB family protein complement(2900440..2901471) Clostridium botulinum F str. Langeland 5402317 YP_001392004.1 CDS CLI_2776 NC_009699.1 2901497 2902183 R identified by match to protein family HMM PF08241; match to protein family HMM PF08242; methyltransferase complement(2901497..2902183) Clostridium botulinum F str. Langeland 5404671 YP_001392005.1 CDS CLI_2777 NC_009699.1 2902198 2903352 R identified by match to protein family HMM PF02350; UDP-N-acetylglucosamine 2-epimerase complement(2902198..2903352) Clostridium botulinum F str. Langeland 5405586 YP_001392006.1 CDS CLI_2778 NC_009699.1 2903385 2904461 R identified by match to protein family HMM PF00483; match to protein family HMM PF00571; nucleotidyl transferase family protein complement(2903385..2904461) Clostridium botulinum F str. Langeland 5405510 YP_001392007.1 CDS CLI_2779 NC_009699.1 2904653 2905000 R identified by similarity to GB:ABK62152.1; hypothetical protein complement(2904653..2905000) Clostridium botulinum F str. Langeland 5402894 YP_001392008.1 CDS CLI_2780 NC_009699.1 2905000 2906799 R identified by similarity to GB:AAK80159.1; match to protein family HMM PF01973; hypothetical protein complement(2905000..2906799) Clostridium botulinum F str. Langeland 5405005 YP_001392009.1 CDS CLI_2781 NC_009699.1 2907041 2907862 R identified by match to protein family HMM PF00669; match to protein family HMM PF00700; flagellin complement(2907041..2907862) Clostridium botulinum F str. Langeland 5404818 YP_001392010.1 CDS CLI_2782 NC_009699.1 2908134 2908475 R hypothetical protein complement(2908134..2908475) Clostridium botulinum F str. Langeland 5401970 YP_001392011.1 CDS fliD NC_009699.1 2908502 2910940 R identified by match to protein family HMM PF02465; match to protein family HMM PF07195; flagellar hook-associated protein 2 complement(2908502..2910940) Clostridium botulinum F str. Langeland 5402478 YP_001392012.1 CDS fliS NC_009699.1 2910994 2911383 R identified by match to protein family HMM PF02561; match to protein family HMM TIGR00208; flagellar protein FliS complement(2910994..2911383) Clostridium botulinum F str. Langeland 5402541 YP_001392013.1 CDS CLI_2785 NC_009699.1 2911420 2911719 R hypothetical protein complement(2911420..2911719) Clostridium botulinum F str. Langeland 5405340 YP_001392014.1 CDS CLI_2786 NC_009699.1 2911776 2912132 R identified by match to protein family HMM PF03646; flagellar protein FlaG complement(2911776..2912132) Clostridium botulinum F str. Langeland 5403831 YP_001392015.1 CDS csrA NC_009699.1 2912148 2912366 R affects carbohydrate metabolism; has regulatory role in many processes; carbon storage regulator complement(2912148..2912366) Clostridium botulinum F str. Langeland 5402709 YP_001392016.1 CDS CLI_2788 NC_009699.1 2912366 2912797 R binds to flagellin and appears to stabilize flagellin during flagella assembly; flagellar assembly protein FliW complement(2912366..2912797) Clostridium botulinum F str. Langeland 5402514 YP_001392017.1 CDS flgL NC_009699.1 2912865 2913827 R identified by match to protein family HMM PF00669; match to protein family HMM PF00700; match to protein family HMM TIGR02550; flagellar hook-associated protein 3 complement(2912865..2913827) Clostridium botulinum F str. Langeland 5403131 YP_001392018.1 CDS flgK NC_009699.1 2913845 2915710 R identified by match to protein family HMM PF00460; match to protein family HMM PF06429; match to protein family HMM TIGR02492; flagellar hook-associated protein FlgK complement(2913845..2915710) Clostridium botulinum F str. Langeland 5405300 YP_001392019.1 CDS CLI_2791 NC_009699.1 2915987 2916391 R identified by match to protein family HMM PF05130; flgN family protein complement(2915987..2916391) Clostridium botulinum F str. Langeland 5403050 YP_001392020.1 CDS CLI_2792 NC_009699.1 2916391 2916672 R identified by match to protein family HMM PF04316; regulator of flagellin synthesis FlgM complement(2916391..2916672) Clostridium botulinum F str. Langeland 5404316 YP_001392021.1 CDS fliN NC_009699.1 2917261 2918421 R One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein complement(2917261..2918421) Clostridium botulinum F str. Langeland 5404490 YP_001392022.1 CDS fliM NC_009699.1 2918414 2919409 R identified by match to protein family HMM PF01052; match to protein family HMM PF02154; match to protein family HMM TIGR01397; flagellar motor switch protein FliM complement(2918414..2919409) Clostridium botulinum F str. Langeland 5404319 YP_001392023.1 CDS CLI_2795 NC_009699.1 2919437 2919832 R identified by match to protein family HMM PF01584; chemotaxis protein CheW complement(2919437..2919832) Clostridium botulinum F str. Langeland 5403040 YP_001392024.1 CDS cheY NC_009699.1 2919932 2920291 R identified by match to protein family HMM PF00072; chemotaxis protein CheY complement(2919932..2920291) Clostridium botulinum F str. Langeland 5405619 YP_001392025.1 CDS cheC NC_009699.1 2920319 2920918 R identified by match to protein family HMM PF04509; chemotaxis protein CheC complement(2920319..2920918) Clostridium botulinum F str. Langeland 5405329 YP_001392026.1 CDS cheA NC_009699.1 2920944 2923019 R identified by match to protein family HMM PF01584; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM PF02895; match to protein family HMM PF07194; chemotaxis protein CheA complement(2920944..2923019) Clostridium botulinum F str. Langeland 5403221 YP_001392027.1 CDS cheR NC_009699.1 2923032 2923802 R identified by match to protein family HMM PF01739; match to protein family HMM PF03705; chemotaxis protein methyltransferase CheR complement(2923032..2923802) Clostridium botulinum F str. Langeland 5404918 YP_001392028.1 CDS cheB NC_009699.1 2923817 2924881 R identified by match to protein family HMM PF00072; match to protein family HMM PF01339; protein-glutamate methylesterase CheB complement(2923817..2924881) Clostridium botulinum F str. Langeland 5402786 YP_001392029.1 CDS cheD NC_009699.1 2924904 2925392 R catalyzes the conversion of glutamine residues to glutamate on methyl-accepting chemotaxis receptors; chemoreceptor glutamine deamidase CheD complement(2924904..2925392) Clostridium botulinum F str. Langeland 5403684 YP_001392030.1 CDS cheW NC_009699.1 2925409 2925855 R identified by match to protein family HMM PF01584; chemotaxis protein CheW complement(2925409..2925855) Clostridium botulinum F str. Langeland 5404884 YP_001392031.1 CDS CLI_2803 NC_009699.1 2925871 2927904 R identified by match to protein family HMM PF03961; hypothetical protein complement(2925871..2927904) Clostridium botulinum F str. Langeland 5402232 YP_001392032.1 CDS CLI_2804 NC_009699.1 2928157 2930112 R identified by match to protein family HMM PF00358; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00830; PTS system glucose family transporter subunit IIABC complement(2928157..2930112) Clostridium botulinum F str. Langeland 5402849 YP_001392033.1 CDS CLI_2805 NC_009699.1 2930195 2931022 R identified by match to protein family HMM PF00874; match to protein family HMM PF03123; BglG family transcriptional antiterminator complement(2930195..2931022) Clostridium botulinum F str. Langeland 5402790 YP_001392034.1 CDS CLI_2806 NC_009699.1 2931271 2932104 R identified by match to protein family HMM PF01063; branched-chain amino acid aminotransferase complement(2931271..2932104) Clostridium botulinum F str. Langeland 5405554 YP_001392035.1 CDS CLI_2807 NC_009699.1 2932229 2932870 R identified by match to protein family HMM PF00702; match to protein family HMM TIGR01488; match to protein family HMM TIGR01490; HAD family hydrolase complement(2932229..2932870) Clostridium botulinum F str. Langeland 5401867 YP_001392036.1 CDS CLI_2808 NC_009699.1 2933127 2933531 R hypothetical protein complement(2933127..2933531) Clostridium botulinum F str. Langeland 5403921 YP_001392037.1 CDS CLI_2809 NC_009699.1 2933792 2933908 R identified by Glimmer3; hypothetical protein complement(2933792..2933908) Clostridium botulinum F str. Langeland 5404919 YP_001392038.1 CDS CLI_2810 NC_009699.1 2934175 2937753 R identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176; pyruvate ferredoxin oxidoreductase complement(2934175..2937753) Clostridium botulinum F str. Langeland 5403290 YP_001392039.1 CDS murG NC_009699.1 2938386 2939450 R UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; UDPdiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase complement(2938386..2939450) Clostridium botulinum F str. Langeland 5401847 YP_001392040.1 CDS CLI_2812 NC_009699.1 2939775 2939939 D identified by Glimmer3; hypothetical protein 2939775..2939939 Clostridium botulinum F str. Langeland 5404588 YP_001392041.1 CDS CLI_2813 NC_009699.1 2940053 2942161 R identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensory box histidine kinase complement(2940053..2942161) Clostridium botulinum F str. Langeland 5402273 YP_001392042.1 CDS recJ NC_009699.1 2943391 2945172 R identified by match to protein family HMM PF01368; match to protein family HMM PF02272; match to protein family HMM TIGR00644; single-stranded-DNA-specific exonuclease RecJ complement(2943391..2945172) Clostridium botulinum F str. Langeland 5402622 YP_001392043.1 CDS CLI_2815 NC_009699.1 2945363 2946181 D identified by match to protein family HMM PF01261; AP endonuclease 2945363..2946181 Clostridium botulinum F str. Langeland 5404930 YP_001392044.1 CDS CLI_2816 NC_009699.1 2946467 2947870 R identified by match to protein family HMM PF01436; NHL repeat-containing protein complement(2946467..2947870) Clostridium botulinum F str. Langeland 5402799 YP_001392045.1 CDS CLI_2817 NC_009699.1 2948465 2949673 R identified by match to protein family HMM PF00675; match to protein family HMM PF05193; M16 family peptidase complement(2948465..2949673) Clostridium botulinum F str. Langeland 5401869 YP_001392046.1 CDS CLI_2818 NC_009699.1 2950244 2950654 D hypothetical protein 2950244..2950654 Clostridium botulinum F str. Langeland 5403980 YP_001392047.1 CDS CLI_2819 NC_009699.1 2950722 2951273 D identified by match to protein family HMM PF01965; match to protein family HMM TIGR01383; DJ-1 family protein 2950722..2951273 Clostridium botulinum F str. Langeland 5405244 YP_001392048.1 CDS glpP NC_009699.1 2951729 2952292 R identified by match to protein family HMM PF04309; glycerol uptake operon antiterminator regulatory protein complement(2951729..2952292) Clostridium botulinum F str. Langeland 5404968 YP_001392049.1 CDS CLI_2821 NC_009699.1 2952341 2955211 R decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A complement(2952341..2955211) Clostridium botulinum F str. Langeland 5401956 YP_001392050.1 CDS CLI_2822 NC_009699.1 2955285 2957240 R decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B complement(2955285..2957240) Clostridium botulinum F str. Langeland 5403875 YP_001392051.1 CDS CLI_2823 NC_009699.1 2957607 2957984 R hypothetical protein complement(2957607..2957984) Clostridium botulinum F str. Langeland 5403244 YP_001392052.1 CDS CLI_2824 NC_009699.1 2958171 2959343 D identified by match to protein family HMM PF00999; monovalent cation:proton antiporter-2 (CPA2) family protein 2958171..2959343 Clostridium botulinum F str. Langeland 5404808 YP_001392053.1 CDS CLI_2825 NC_009699.1 2959356 2959706 D hypothetical protein 2959356..2959706 Clostridium botulinum F str. Langeland 5402045 YP_001392054.1 CDS CLI_2826 NC_009699.1 2960167 2960403 D identified by Glimmer3; hypothetical protein 2960167..2960403 Clostridium botulinum F str. Langeland 5403951 YP_001392055.1 CDS CLI_2827 NC_009699.1 2960423 2961316 D identified by match to protein family HMM PF01522; polysaccharide deacetylase 2960423..2961316 Clostridium botulinum F str. Langeland 5405303 YP_001392056.1 CDS CLI_2828 NC_009699.1 2961395 2962684 R identified by Glimmer3; hypothetical protein complement(2961395..2962684) Clostridium botulinum F str. Langeland 5402319 YP_001392057.1 CDS galE NC_009699.1 2962722 2963702 R identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01179; UDP-glucose 4-epimerase complement(2962722..2963702) Clostridium botulinum F str. Langeland 5404458 YP_001392058.1 CDS CLI_2830 NC_009699.1 2964049 2964465 R identified by match to protein family HMM PF00258; match to protein family HMM TIGR01753; flavodoxin complement(2964049..2964465) Clostridium botulinum F str. Langeland 5404718 YP_001392059.1 CDS CLI_2831 NC_009699.1 2964733 2966154 R identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein complement(2964733..2966154) Clostridium botulinum F str. Langeland 5404439 YP_001392060.1 CDS CLI_2832 NC_009699.1 2966764 2968830 R identified by match to protein family HMM PF00165; match to protein family HMM PF07883; AraC family transcriptional regulator complement(2966764..2968830) Clostridium botulinum F str. Langeland 5404877 YP_001392061.1 CDS CLI_2833 NC_009699.1 2969231 2970268 D identified by match to protein family HMM PF02016; LD-carboxypeptidase family protein 2969231..2970268 Clostridium botulinum F str. Langeland 5405367 YP_001392062.1 CDS glpK NC_009699.1 2970699 2972195 R identified by match to protein family HMM PF00370; match to protein family HMM PF02782; match to protein family HMM TIGR01311; glycerol kinase complement(2970699..2972195) Clostridium botulinum F str. Langeland 5404320 YP_001392063.1 CDS CLI_2835 NC_009699.1 2972447 2973151 R identified by match to protein family HMM PF00230; match to protein family HMM TIGR00861; glycerol uptake facilitator protein complement(2972447..2973151) Clostridium botulinum F str. Langeland 5404484 YP_001392064.1 CDS CLI_2836 NC_009699.1 2973686 2974006 D identified by match to protein family HMM PF01906; hypothetical protein 2973686..2974006 Clostridium botulinum F str. Langeland 5403119 YP_001392065.1 CDS CLI_2837 NC_009699.1 2974118 2974816 R identified by match to protein family HMM PF04892; VanZ family membrane protein complement(2974118..2974816) Clostridium botulinum F str. Langeland 5403230 YP_001392066.1 CDS CLI_2838 NC_009699.1 2975078 2976154 R ABC transporter permease complement(2975078..2976154) Clostridium botulinum F str. Langeland 5401940 YP_001392067.1 CDS CLI_2839 NC_009699.1 2976138 2977034 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(2976138..2977034) Clostridium botulinum F str. Langeland 5402213 YP_001392068.1 CDS CLI_2840 NC_009699.1 2977040 2977420 R identified by match to protein family HMM PF00392; GntR family transcriptional regulator complement(2977040..2977420) Clostridium botulinum F str. Langeland 5403540 YP_001392069.1 CDS CLI_2841 NC_009699.1 2977594 2978109 R identified by match to protein family HMM PF04892; VanZ family membrane protein complement(2977594..2978109) Clostridium botulinum F str. Langeland 5403327 YP_001392070.1 CDS CLI_2842 NC_009699.1 2978430 2980142 D catalyzes the reduction of hydroxylamine to ammonia and water; hydroxylamine reductase 2978430..2980142 Clostridium botulinum F str. Langeland 5405620 YP_001392071.1 CDS CLI_2843 NC_009699.1 2980624 2981214 D membrane-spanning protein 2980624..2981214 Clostridium botulinum F str. Langeland 5405182 YP_001392072.1 CDS CLI_2844 NC_009699.1 2981458 2982690 D identified by match to protein family HMM PF02073; aminopeptidase 2981458..2982690 Clostridium botulinum F str. Langeland 5403152 YP_001392073.1 CDS gerAC NC_009699.1 2982878 2984023 R identified by match to protein family HMM PF05504; match to protein family HMM TIGR02887; spore germination protein complement(2982878..2984023) Clostridium botulinum F str. Langeland 5403415 YP_001392074.1 CDS CLI_2846 NC_009699.1 2983977 2985110 R identified by match to protein family HMM PF03845; match to protein family HMM TIGR00912; spore germination protein complement(2983977..2985110) Clostridium botulinum F str. Langeland 5402239 YP_001392075.1 CDS gerAA NC_009699.1 2985100 2986587 R identified by match to protein family HMM PF03323; spore germination protein complement(2985100..2986587) Clostridium botulinum F str. Langeland 5402678 YP_001392076.1 CDS CLI_2848 NC_009699.1 2986858 2987067 R identified by Glimmer3; hypothetical protein complement(2986858..2987067) Clostridium botulinum F str. Langeland 5404801 YP_001392077.1 CDS CLI_2849 NC_009699.1 2987292 2987411 R identified by Glimmer3; hypothetical protein complement(2987292..2987411) Clostridium botulinum F str. Langeland 5403376 YP_001392078.1 CDS CLI_2850 NC_009699.1 2987413 2988285 R with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate; pyridoxal biosynthesis lyase PdxS complement(2987413..2988285) Clostridium botulinum F str. Langeland 5404154 YP_001392079.1 CDS CLI_2851 NC_009699.1 2988832 2989563 R identified by match to protein family HMM PF01522; polysaccharide deacetylase complement(2988832..2989563) Clostridium botulinum F str. Langeland 5403620 YP_001392080.1 CDS CLI_2852 NC_009699.1 2989784 2991358 R identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF03880; DEAD/DEAH box helicase complement(2989784..2991358) Clostridium botulinum F str. Langeland 5404276 YP_001392081.1 CDS CLI_2853 NC_009699.1 2991435 2991602 R hypothetical protein complement(2991435..2991602) Clostridium botulinum F str. Langeland 5404777 YP_001392082.1 CDS CLI_2854 NC_009699.1 2992034 2992459 D identified by Glimmer3; hypothetical protein 2992034..2992459 Clostridium botulinum F str. Langeland 5402241 YP_001392083.1 CDS CLI_2855 NC_009699.1 2992548 2994242 R identified by match to protein family HMM PF00015; match to protein family HMM PF00672; methyl-accepting chemotaxis protein complement(2992548..2994242) Clostridium botulinum F str. Langeland 5403752 YP_001392084.1 CDS CLI_2856 NC_009699.1 2994439 2994849 R identified by match to protein family HMM PF00582; universal stress protein family protein complement(2994439..2994849) Clostridium botulinum F str. Langeland 5403547 YP_001392085.1 CDS CLI_2857 NC_009699.1 2995483 2996124 D identified by match to protein family HMM PF00037; (Fe-S)-binding protein 2995483..2996124 Clostridium botulinum F str. Langeland 5402908 YP_001392086.1 CDS CLI_2858 NC_009699.1 2996384 2997301 R catalyzes the formation of glutamate from glutamine; glutaminase complement(2996384..2997301) Clostridium botulinum F str. Langeland 5403927 YP_001392087.1 CDS CLI_2859 NC_009699.1 2997696 2998721 R identified by match to protein family HMM PF06725; hypothetical protein complement(2997696..2998721) Clostridium botulinum F str. Langeland 5405494 YP_001392088.1 CDS CLI_2860 NC_009699.1 2998989 2999273 R lipoprotein complement(2998989..2999273) Clostridium botulinum F str. Langeland 5403682 YP_001392089.1 CDS CLI_2861 NC_009699.1 2999403 3001463 R identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF02743; methyl-accepting chemotaxis protein complement(2999403..3001463) Clostridium botulinum F str. Langeland 5404841 YP_001392090.1 CDS CLI_2862 NC_009699.1 3001981 3002799 R hypothetical protein complement(3001981..3002799) Clostridium botulinum F str. Langeland 5402821 YP_001392091.1 CDS nrdB NC_009699.1 3003143 3004171 R identified by match to protein family HMM PF00268; ribonucleoside-diphosphate reductase subunit beta complement(3003143..3004171) Clostridium botulinum F str. Langeland 5402008 YP_001392092.1 CDS nrdA NC_009699.1 3004367 3006658 R Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha complement(3004367..3006658) Clostridium botulinum F str. Langeland 5403701 YP_001392093.1 CDS CLI_2865 NC_009699.1 3007688 3008809 D hypothetical protein 3007688..3008809 Clostridium botulinum F str. Langeland 5402587 YP_001392094.1 CDS CLI_2866 NC_009699.1 3009109 3009897 D hypothetical protein 3009109..3009897 Clostridium botulinum F str. Langeland 5402919 YP_001392095.1 CDS dinB NC_009699.1 3010057 3011106 R involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV complement(3010057..3011106) Clostridium botulinum F str. Langeland 5403142 YP_001392096.1 CDS CLI_2868 NC_009699.1 3011571 3012806 R catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines; dihydropyrimidine dehydrogenase complement(3011571..3012806) Clostridium botulinum F str. Langeland 5405000 YP_001392097.1 CDS CLI_2869 NC_009699.1 3012806 3014122 R identified by match to protein family HMM PF00070; match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase family protein complement(3012806..3014122) Clostridium botulinum F str. Langeland 5403446 YP_001392098.1 CDS pyrR-2 NC_009699.1 3014571 3015119 R identified by match to protein family HMM PF00156; pyrimidine operon regulatory protein/uracil phosphoribosyltransferase complement(3014571..3015119) Clostridium botulinum F str. Langeland 5401941 YP_001392099.1 CDS CLI_2871 NC_009699.1 3015448 3016503 R identified by match to protein family HMM PF02698; hypothetical protein complement(3015448..3016503) Clostridium botulinum F str. Langeland 5403714 YP_001392100.1 CDS CLI_2872 NC_009699.1 3017019 3017621 R identified by similarity to GB:AAO35228.1; hypothetical protein complement(3017019..3017621) Clostridium botulinum F str. Langeland 5403984 YP_001392101.1 CDS CLI_2873 NC_009699.1 3017777 3018196 R identified by match to protein family HMM PF01047; MarR family transcriptional regulator complement(3017777..3018196) Clostridium botulinum F str. Langeland 5405277 YP_001392102.1 CDS CLI_2874 NC_009699.1 3018214 3020472 R identified by match to protein family HMM PF00005; excinuclease ABC subunit A complement(3018214..3020472) Clostridium botulinum F str. Langeland 5403305 YP_001392103.1 CDS CLI_2875 NC_009699.1 3021017 3021325 D hypothetical protein 3021017..3021325 Clostridium botulinum F str. Langeland 5403228 YP_001392104.1 CDS ligT NC_009699.1 3021436 3021972 R identified by match to protein family HMM PF02834; match to protein family HMM TIGR02258; 2'-5' RNA ligase complement(3021436..3021972) Clostridium botulinum F str. Langeland 5405632 YP_001392105.1 CDS CLI_2877 NC_009699.1 3022148 3022546 R identified by Glimmer3; hypothetical protein complement(3022148..3022546) Clostridium botulinum F str. Langeland 5402971 YP_001392106.1 CDS CLI_2878 NC_009699.1 3023121 3024833 R identified by match to protein family HMM PF00015; match to protein family HMM PF00672; methyl-accepting chemotaxis protein complement(3023121..3024833) Clostridium botulinum F str. Langeland 5403568 YP_001392107.1 CDS CLI_2879 NC_009699.1 3025546 3025983 R identified by match to protein family HMM PF00293; MutT/nudix family protein complement(3025546..3025983) Clostridium botulinum F str. Langeland 5402691 YP_001392108.1 CDS CLI_2880 NC_009699.1 3026524 3026991 D identified by match to protein family HMM PF01475; FUR family transcriptional regulator 3026524..3026991 Clostridium botulinum F str. Langeland 5403322 YP_001392109.1 CDS CLI_2881 NC_009699.1 3027124 3029121 D identified by Glimmer3; hypothetical protein 3027124..3029121 Clostridium botulinum F str. Langeland 5404593 YP_001392110.1 CDS CLI_2882 NC_009699.1 3029208 3031427 R identified by match to protein family HMM PF00704; glycosyl hydrolase family protein complement(3029208..3031427) Clostridium botulinum F str. Langeland 5402164 YP_001392111.1 CDS nagB NC_009699.1 3031655 3032389 R catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate; glucosamine-6-phosphate deaminase complement(3031655..3032389) Clostridium botulinum F str. Langeland 5405230 YP_001392112.1 CDS nagA NC_009699.1 3032472 3033614 R identified by match to protein family HMM PF01979; match to protein family HMM PF07969; match to protein family HMM TIGR00221; N-acetylglucosamine-6-phosphate deacetylase complement(3032472..3033614) Clostridium botulinum F str. Langeland 5403906 YP_001392113.1 CDS CLI_2885 NC_009699.1 3033775 3034509 R identified by match to protein family HMM PF00392; match to protein family HMM PF07702; GntR family transcriptional regulator complement(3033775..3034509) Clostridium botulinum F str. Langeland 5404077 YP_001392114.1 CDS CLI_2886 NC_009699.1 3034801 3034953 R identified by Glimmer3; hypothetical protein complement(3034801..3034953) Clostridium botulinum F str. Langeland 5405274 YP_001392115.1 CDS CLI_2887 NC_009699.1 3035472 3036581 R identified by Glimmer3; hypothetical protein complement(3035472..3036581) Clostridium botulinum F str. Langeland 5404600 YP_001392116.1 CDS CLI_2889 NC_009699.1 3037862 3038719 D identified by match to protein family HMM PF00874; match to protein family HMM PF03123; BglG family transcriptional antiterminator 3037862..3038719 Clostridium botulinum F str. Langeland 5402729 YP_001392117.1 CDS ptbA NC_009699.1 3038939 3039418 R identified by match to protein family HMM PF00358; match to protein family HMM TIGR00830; PTS system glucose subfamily transporter subunit IIA complement(3038939..3039418) Clostridium botulinum F str. Langeland 5402147 YP_001392118.1 CDS nagE NC_009699.1 3040114 3041556 D identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826; match to protein family HMM TIGR01998; PTS system N-acetylglucosamine-specific transporter subunit IIBC 3040114..3041556 Clostridium botulinum F str. Langeland 5402935 YP_001392119.1 CDS CLI_2892 NC_009699.1 3042099 3043469 D identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein 3042099..3043469 Clostridium botulinum F str. Langeland 5402788 YP_001392120.1 CDS CLI_2893 NC_009699.1 3043633 3045027 R identified by match to protein family HMM PF01554; match to protein family HMM PF01943; match to protein family HMM TIGR00797; MATE efflux family protein complement(3043633..3045027) Clostridium botulinum F str. Langeland 5402777 YP_001392121.1 CDS CLI_2894 NC_009699.1 3045263 3046462 R identified by match to protein family HMM PF00258; match to protein family HMM PF00753; metallo-beta-lactamase family protein/flavodoxin complement(3045263..3046462) Clostridium botulinum F str. Langeland 5404502 YP_001392122.1 CDS CLI_2895 NC_009699.1 3046521 3048428 R identified by match to protein family HMM PF00301; match to protein family HMM PF00441; match to protein family HMM PF00766; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase complement(3046521..3048428) Clostridium botulinum F str. Langeland 5402416 YP_001392123.1 CDS CLI_2896 NC_009699.1 3048785 3049528 R identified by match to protein family HMM PF00665; IS3 family transposase complement(3048785..3049528) Clostridium botulinum F str. Langeland 5403973 YP_001392124.1 CDS CLI_2897 NC_009699.1 3049844 3050560 D identified by match to protein family HMM PF01144; match to protein family HMM TIGR02429; CoA-transferase subunit A 3049844..3050560 Clostridium botulinum F str. Langeland 5404781 YP_001392125.1 CDS CLI_2898 NC_009699.1 3050569 3051225 D identified by match to protein family HMM PF01144; match to protein family HMM TIGR02428; CoA-transferase subunit B 3050569..3051225 Clostridium botulinum F str. Langeland 5403010 YP_001392126.1 CDS CLI_2899 NC_009699.1 3051807 3052376 R hypothetical protein complement(3051807..3052376) Clostridium botulinum F str. Langeland 5403794 YP_001392127.1 CDS CLI_2900 NC_009699.1 3052595 3053083 R identified by match to protein family HMM PF00111; match to protein family HMM PF01799; xanthine dehydrogenase family protein, iron-sulfur binding protein complement(3052595..3053083) Clostridium botulinum F str. Langeland 5403396 YP_001392128.1 CDS CLI_2901 NC_009699.1 3053088 3053918 R identified by match to protein family HMM PF00941; xanthine dehydrogenase family protein, FAD-binding subunit complement(3053088..3053918) Clostridium botulinum F str. Langeland 5404915 YP_001392129.1 CDS CLI_2902 NC_009699.1 3053915 3056245 R identified by match to protein family HMM PF01315; match to protein family HMM PF02738; xanthine dehydrogenase family protein, molybdopterin-binding subunit complement(3053915..3056245) Clostridium botulinum F str. Langeland 5404833 YP_001392130.1 CDS CLI_2903 NC_009699.1 3056651 3058522 D identified by match to protein family HMM PF00358; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00830; match to protein family HMM TIGR01995; PTS system beta-glucoside-specific transporter subunit IIABC 3056651..3058522 Clostridium botulinum F str. Langeland 5402567 YP_001392131.1 CDS CLI_2904 NC_009699.1 3058579 3059991 D identified by match to protein family HMM PF00232; glycosyl hydrolase family protein 3058579..3059991 Clostridium botulinum F str. Langeland 5404962 YP_001392132.1 CDS CLI_2905 NC_009699.1 3060030 3060863 D identified by similarity to SP:P39805; match to protein family HMM PF00874; match to protein family HMM PF03123; transcription antiterminator 3060030..3060863 Clostridium botulinum F str. Langeland 5403304 YP_001392133.1 CDS CLI_2906 NC_009699.1 3061189 3062406 R identified by match to protein family HMM PF00999; monovalent cation:proton antiporter-2 (CPA2) family protein complement(3061189..3062406) Clostridium botulinum F str. Langeland 5402878 YP_001392134.1 CDS CLI_2908 NC_009699.1 3063524 3064195 R identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; HAD family hydrolase complement(3063524..3064195) Clostridium botulinum F str. Langeland 5403064 YP_001392135.1 CDS CLI_2909 NC_009699.1 3064399 3064929 R identified by match to protein family HMM PF01510; prophage LambdaCh01, N-acetylmuramoyl-L-alanine amidase complement(3064399..3064929) Clostridium botulinum F str. Langeland 5404885 YP_001392136.1 CDS CLI_2910 NC_009699.1 3065082 3065222 R identified by Glimmer3; hypothetical protein complement(3065082..3065222) Clostridium botulinum F str. Langeland 5402694 YP_001392137.1 CDS CLI_2911 NC_009699.1 3065710 3066744 R identified by match to protein family HMM PF04055; match to protein family HMM TIGR00048; chloramphenicol/florfenicol resistance protein complement(3065710..3066744) Clostridium botulinum F str. Langeland 5403034 YP_001392138.1 CDS CLI_2912 NC_009699.1 3066907 3068385 R identified by match to protein family HMM PF00005; drug resistance ABC transporter ATP-binding protein complement(3066907..3068385) Clostridium botulinum F str. Langeland 5405334 YP_001392139.1 CDS CLI_2913 NC_009699.1 3069336 3070133 R hypothetical protein complement(3069336..3070133) Clostridium botulinum F str. Langeland 5405635 YP_001392140.1 CDS rumA-1 NC_009699.1 3071181 3072542 R identified by match to protein family HMM PF01938; match to protein family HMM PF02475; match to protein family HMM PF05958; match to protein family HMM TIGR00479; 23S rRNA (uracil-5-)-methyltransferase RumA complement(3071181..3072542) Clostridium botulinum F str. Langeland 5404529 YP_001392141.1 CDS CLI_2916 NC_009699.1 3072829 3073275 R identified by Glimmer3; hypothetical protein complement(3072829..3073275) Clostridium botulinum F str. Langeland 5405543 YP_001392142.1 CDS CLI_2917 NC_009699.1 3073606 3075465 D identified by match to protein family HMM PF00884; sulfatase family protein 3073606..3075465 Clostridium botulinum F str. Langeland 5404224 YP_001392143.1 CDS CLI_2918 NC_009699.1 3075491 3076243 D identified by match to protein family HMM PF01925; hypothetical protein 3075491..3076243 Clostridium botulinum F str. Langeland 5402435 YP_001392144.1 CDS ribH NC_009699.1 3076653 3077117 R RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase complement(3076653..3077117) Clostridium botulinum F str. Langeland 5404108 YP_001392145.1 CDS ribAB NC_009699.1 3077149 3078354 R identified by match to protein family HMM PF00925; match to protein family HMM PF00926; match to protein family HMM TIGR00505; match to protein family HMM TIGR00506; bifunctional riboflavin biosynthesis protein RibAB complement(3077149..3078354) Clostridium botulinum F str. Langeland 5403439 YP_001392146.1 CDS ribE NC_009699.1 3078662 3079348 R catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha complement(3078662..3079348) Clostridium botulinum F str. Langeland 5401845 YP_001392147.1 CDS ribD NC_009699.1 3079329 3080426 R identified by match to protein family HMM PF00383; match to protein family HMM PF01872; match to protein family HMM TIGR00227; match to protein family HMM TIGR00326; riboflavin biosynthesis protein RibD complement(3079329..3080426) Clostridium botulinum F str. Langeland 5403279 YP_001392148.1 CDS pepD-3 NC_009699.1 3080830 3082266 R identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01893; aminoacyl-histidine dipeptidase complement(3080830..3082266) Clostridium botulinum F str. Langeland 5405537 YP_001392149.1 CDS CLI_2924 NC_009699.1 3082647 3083540 D identified by match to protein family HMM PF00753; metallo-beta-lactamase family protein 3082647..3083540 Clostridium botulinum F str. Langeland 5403748 YP_001392150.1 CDS mgtA NC_009699.1 3083731 3086376 R identified by match to protein family HMM PF00122; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01524; magnesium-translocating P-type ATPase complement(3083731..3086376) Clostridium botulinum F str. Langeland 5404059 YP_001392151.1 CDS CLI_2926 NC_009699.1 3087280 3087684 R hypothetical protein complement(3087280..3087684) Clostridium botulinum F str. Langeland 5402892 YP_001392152.1 CDS CLI_2927 NC_009699.1 3087787 3088872 R identified by match to protein family HMM PF03845; match to protein family HMM TIGR00912; spore germination protein complement(3087787..3088872) Clostridium botulinum F str. Langeland 5404898 YP_001392153.1 CDS CLI_2928 NC_009699.1 3088990 3090420 D identified by match to protein family HMM PF03323; GerA family spore germination protein 3088990..3090420 Clostridium botulinum F str. Langeland 5405115 YP_001392154.1 CDS CLI_2929 NC_009699.1 3090498 3091592 D identified by match to protein family HMM PF05504; match to protein family HMM TIGR02887; spore germination protein 3090498..3091592 Clostridium botulinum F str. Langeland 5404937 YP_001392155.1 CDS purD NC_009699.1 3091749 3092990 R catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase complement(3091749..3092990) Clostridium botulinum F str. Langeland 5405162 YP_001392156.1 CDS purH NC_009699.1 3093139 3094638 R involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase complement(3093139..3094638) Clostridium botulinum F str. Langeland 5405142 YP_001392157.1 CDS purN NC_009699.1 3094852 3095469 R glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; phosphoribosylglycinamide formyltransferase complement(3094852..3095469) Clostridium botulinum F str. Langeland 5402262 YP_001392158.1 CDS purM NC_009699.1 3095597 3096592 R catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase complement(3095597..3096592) Clostridium botulinum F str. Langeland 5403713 YP_001392159.1 CDS purF-1 NC_009699.1 3096764 3098212 R Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase complement(3096764..3098212) Clostridium botulinum F str. Langeland 5404299 YP_001392160.1 CDS purC NC_009699.1 3098304 3099008 R catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase complement(3098304..3099008) Clostridium botulinum F str. Langeland 5404840 YP_001392161.1 CDS purE NC_009699.1 3099008 3099487 R identified by match to protein family HMM PF00731; match to protein family HMM TIGR01162; phosphoribosylaminoimidazole carboxylase catalytic subunit complement(3099008..3099487) Clostridium botulinum F str. Langeland 5404996 YP_001392162.1 CDS CLI_2937 NC_009699.1 3100170 3102725 R identified by match to protein family HMM PF00111; match to protein family HMM PF01315; match to protein family HMM PF01799; match to protein family HMM PF02738; match to protein family HMM TIGR03311; xanthine dehydrogenase family protein, molybdopterin-binding subunit complement(3100170..3102725) Clostridium botulinum F str. Langeland 5403820 YP_001392163.1 CDS CLI_2938 NC_009699.1 3103087 3104304 R Zn-dependent extracellular dipeptidase; similar to succinyl-diaminopimelate desuccinylases; peptidase complement(3103087..3104304) Clostridium botulinum F str. Langeland 5402053 YP_001392164.1 CDS CLI_2939 NC_009699.1 3104330 3105658 R in Escherichia coli expression is induced in response to phase-specific signals and controlled by RpoS; chlorohydrolase/aminohydrolase complement(3104330..3105658) Clostridium botulinum F str. Langeland 5402808 YP_001392165.1 CDS CLI_2940 NC_009699.1 3105689 3108706 R with YgfM and YgfN forms a selenate reductase, which seems to catalyze the reduction of selenate to selenite; YgfK mutants are unable to reduce selenate; involved in purine salvage process; seems to act as an oxidoreductase, but sequence similarity suggests it is a dihydrothymine dehydrogenase; selenate reductase subunit YgfK complement(3105689..3108706) Clostridium botulinum F str. Langeland 5405381 YP_001392166.1 CDS CLI_2941 NC_009699.1 3108742 3109938 R identified by match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR03316; aspartate/ornithine carbamoyltransferase family protein complement(3108742..3109938) Clostridium botulinum F str. Langeland 5404798 YP_001392167.1 CDS hydA NC_009699.1 3110280 3111674 R catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position; phenylhydantoinase complement(3110280..3111674) Clostridium botulinum F str. Langeland 5405489 YP_001392168.1 CDS CLI_2943 NC_009699.1 3111724 3113130 R identified by match to protein family HMM PF00860; match to protein family HMM TIGR00801; match to protein family HMM TIGR03173; xanthine/uracil permease family protein complement(3111724..3113130) Clostridium botulinum F str. Langeland 5401911 YP_001392169.1 CDS dpaL NC_009699.1 3113152 3114363 R catalyzes the formation of pyruvate from 2,3-diaminopropionate; diaminopropionate ammonia-lyase complement(3113152..3114363) Clostridium botulinum F str. Langeland 5404461 YP_001392170.1 CDS CLI_2945 NC_009699.1 3114647 3116410 R identified by match to protein family HMM PF00158; match to protein family HMM PF02954; sigma-54 dependent transcriptional regulator complement(3114647..3116410) Clostridium botulinum F str. Langeland 5405641 YP_001392171.1 CDS CLI_2946 NC_009699.1 3116774 3117511 D identified by match to protein family HMM TIGR03172; hypothetical protein 3116774..3117511 Clostridium botulinum F str. Langeland 5403945 YP_001392172.1 CDS CLI_2947 NC_009699.1 3117526 3118140 D identified by match to protein family HMM TIGR03310; hypothetical protein 3117526..3118140 Clostridium botulinum F str. Langeland 5403153 YP_001392173.1 CDS CLI_2948 NC_009699.1 3118121 3118969 D identified by match to protein family HMM TIGR03309; hypothetical protein 3118121..3118969 Clostridium botulinum F str. Langeland 5403387 YP_001392174.1 CDS CLI_2949 NC_009699.1 3118951 3119760 D identified by match to protein family HMM PF02625; xanthine dehydrogenase accessory factor 3118951..3119760 Clostridium botulinum F str. Langeland 5404443 YP_001392175.1 CDS CLI_2950 NC_009699.1 3119786 3120331 D hypothetical protein 3119786..3120331 Clostridium botulinum F str. Langeland 5402748 YP_001392176.1 CDS CLI_2951 NC_009699.1 3120328 3121296 D identified by match to protein family HMM PF00950; match to protein family HMM PF01032; iron ABC transporter permease 3120328..3121296 Clostridium botulinum F str. Langeland 5403100 YP_001392177.1 CDS CLI_2952 NC_009699.1 3121293 3122087 D identified by match to protein family HMM PF00005; iron ABC transporter ATP-binding protein 3121293..3122087 Clostridium botulinum F str. Langeland 5402108 YP_001392178.1 CDS CLI_2953 NC_009699.1 3122266 3123324 D identified by match to protein family HMM PF01497; iron chelate uptake ABC transporter solute-binding protein 3122266..3123324 Clostridium botulinum F str. Langeland 5403506 YP_001392179.1 CDS CLI_2954 NC_009699.1 3123462 3123794 D identified by Glimmer3; hypothetical protein 3123462..3123794 Clostridium botulinum F str. Langeland 5405660 YP_001392180.1 CDS CLI_2955 NC_009699.1 3123922 3124494 D identified by match to protein family HMM PF00657; GDSL family lipase/acylhydrolase 3123922..3124494 Clostridium botulinum F str. Langeland 5405126 YP_001392181.1 CDS CLI_2956 NC_009699.1 3124608 3125201 R identified by match to protein family HMM PF02698; hypothetical protein complement(3124608..3125201) Clostridium botulinum F str. Langeland 5401891 YP_001392182.1 CDS CLI_2957 NC_009699.1 3125602 3127044 R identified by match to protein family HMM PF00860; xanthine/uracil permease family protein complement(3125602..3127044) Clostridium botulinum F str. Langeland 5402201 YP_001392183.1 CDS CLI_2958 NC_009699.1 3127633 3128985 R identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835; sodium:alanine symporter family protein complement(3127633..3128985) Clostridium botulinum F str. Langeland 5405225 YP_001392184.1 CDS CLI_2959 NC_009699.1 3129935 3132226 R helicase complement(3129935..3132226) Clostridium botulinum F str. Langeland 5403763 YP_001392185.1 CDS adh NC_009699.1 3132526 3133587 R identified by similarity to SP:P14941; match to protein family HMM PF00107; match to protein family HMM PF08240; NADP-dependent alcohol dehydrogenase complement(3132526..3133587) Clostridium botulinum F str. Langeland 5405587 YP_001392186.1 CDS CLI_2961 NC_009699.1 3133811 3135709 R identified by match to protein family HMM PF00158; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF02954; sigma-54 dependent trancsriptional regulator complement(3133811..3135709) Clostridium botulinum F str. Langeland 5405664 YP_001392187.1 CDS mnmA NC_009699.1 3135996 3137057 R catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA complement(3135996..3137057) Clostridium botulinum F str. Langeland 5405195 YP_001392188.1 CDS CLI_2963 NC_009699.1 3137679 3139310 R identified by match to protein family HMM PF01546; M20 family peptidase complement(3137679..3139310) Clostridium botulinum F str. Langeland 5405352 YP_001392189.1 CDS CLI_2964 NC_009699.1 3139310 3139807 R hypothetical protein complement(3139310..3139807) Clostridium botulinum F str. Langeland 5402158 YP_001392190.1 CDS CLI_2965 NC_009699.1 3140141 3141466 D identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471; HlyC/CorC family protein 3140141..3141466 Clostridium botulinum F str. Langeland 5402588 YP_001392191.1 CDS CLI_2966 NC_009699.1 3141818 3142108 R identified by match to protein family HMM PF01910; hypothetical protein complement(3141818..3142108) Clostridium botulinum F str. Langeland 5402119 YP_001392192.1 CDS thiC NC_009699.1 3142127 3143440 R required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC complement(3142127..3143440) Clostridium botulinum F str. Langeland 5405306 YP_001392193.1 CDS purF-2 NC_009699.1 3143651 3145027 R identified by match to protein family HMM PF00156; match to protein family HMM PF00310; match to protein family HMM TIGR01134; amidophosphoribosyltransferase complement(3143651..3145027) Clostridium botulinum F str. Langeland 5403548 YP_001392194.1 CDS CLI_2969 NC_009699.1 3145290 3145571 R identified by match to protein family HMM PF04456; hypothetical protein complement(3145290..3145571) Clostridium botulinum F str. Langeland 5403258 YP_001392195.1 CDS CLI_2970 NC_009699.1 3145627 3146316 R hypothetical protein complement(3145627..3146316) Clostridium botulinum F str. Langeland 5403470 YP_001392196.1 CDS CLI_2971 NC_009699.1 3146318 3146968 R hypothetical protein complement(3146318..3146968) Clostridium botulinum F str. Langeland 5403846 YP_001392197.1 CDS CLI_2972 NC_009699.1 3146974 3147831 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(3146974..3147831) Clostridium botulinum F str. Langeland 5402647 YP_001392198.1 CDS CLI_2973 NC_009699.1 3148038 3148409 R identified by match to protein family HMM PF00392; GntR family transcriptional regulator complement(3148038..3148409) Clostridium botulinum F str. Langeland 5403400 YP_001392199.1 CDS CLI_2974 NC_009699.1 3149108 3149620 D hypothetical protein 3149108..3149620 Clostridium botulinum F str. Langeland 5402710 YP_001392200.1 CDS ribB NC_009699.1 3150317 3150958 D identified by match to protein family HMM PF00926; match to protein family HMM TIGR00506; 3,4-dihydroxy-2-butanone 4-phosphate synthase 3150317..3150958 Clostridium botulinum F str. Langeland 5402073 YP_001392201.1 CDS CLI_2976 NC_009699.1 3151567 3152310 R identified by match to protein family HMM PF00037; (Fe-S)-binding protein complement(3151567..3152310) Clostridium botulinum F str. Langeland 5405653 YP_001392202.1 CDS CLI_2977 NC_009699.1 3152417 3153094 D identified by match to protein family HMM PF00027; cyclic nucleotide-binding protein 3152417..3153094 Clostridium botulinum F str. Langeland 5403179 YP_001392203.1 CDS CLI_2978 NC_009699.1 3153183 3153626 D identified by match to protein family HMM PF07486; cell wall hydrolase 3153183..3153626 Clostridium botulinum F str. Langeland 5403832 YP_001392204.1 CDS CLI_2979 NC_009699.1 3153649 3154170 D hypothetical protein 3153649..3154170 Clostridium botulinum F str. Langeland 5401984 YP_001392205.1 CDS CLI_2980 NC_009699.1 3154401 3154745 R identified by match to protein family HMM PF07883; hypothetical protein complement(3154401..3154745) Clostridium botulinum F str. Langeland 5404509 YP_001392206.1 CDS CLI_2981 NC_009699.1 3154862 3157024 R identified by match to protein family HMM PF01061; match to protein family HMM TIGR03061; match to protein family HMM TIGR03062; phage infection protein complement(3154862..3157024) Clostridium botulinum F str. Langeland 5404079 YP_001392207.1 CDS CLI_2982 NC_009699.1 3157333 3158085 R identified by match to protein family HMM PF03009; glycerophosphoryl diester phosphodiesterase family protein complement(3157333..3158085) Clostridium botulinum F str. Langeland 5403215 YP_001392208.1 CDS CLI_2983 NC_009699.1 3158464 3159426 R hypothetical protein complement(3158464..3159426) Clostridium botulinum F str. Langeland 5403552 YP_001392209.1 CDS CLI_2984 NC_009699.1 3159888 3161141 D identified by match to protein family HMM PF00282; decarboxylase family protein 3159888..3161141 Clostridium botulinum F str. Langeland 5403514 YP_001392210.1 CDS CLI_2985 NC_009699.1 3161232 3162551 R identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471; CBS/transporter associated domain-containing protein complement(3161232..3162551) Clostridium botulinum F str. Langeland 5402058 YP_001392211.1 CDS CLI_2986 NC_009699.1 3163201 3163935 R identified by match to protein family HMM PF02591; hypothetical protein complement(3163201..3163935) Clostridium botulinum F str. Langeland 5403357 YP_001392212.1 CDS CLI_2987 NC_009699.1 3164074 3164877 R identified by match to protein family HMM PF01784; match to protein family HMM TIGR00486; hypothetical protein complement(3164074..3164877) Clostridium botulinum F str. Langeland 5402751 YP_001392213.1 CDS CLI_2988 NC_009699.1 3164868 3165557 R identified by match to protein family HMM PF04816; hypothetical protein complement(3164868..3165557) Clostridium botulinum F str. Langeland 5405604 YP_001392214.1 CDS CLI_2989 NC_009699.1 3165633 3166520 R hypothetical protein complement(3165633..3166520) Clostridium botulinum F str. Langeland 5403056 YP_001392215.1 CDS rpoD NC_009699.1 3166595 3167680 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; primary sigma factor of bacterium; RNA polymerase sigma factor RpoD complement(3166595..3167680) Clostridium botulinum F str. Langeland 5405382 YP_001392216.1 CDS dnaG NC_009699.1 3167705 3169477 R synthesizes RNA primers at the replication forks; DNA primase complement(3167705..3169477) Clostridium botulinum F str. Langeland 5405287 YP_001392217.1 CDS CLI_2992 NC_009699.1 3169760 3170788 R dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein complement(3169760..3170788) Clostridium botulinum F str. Langeland 5402782 YP_001392218.1 CDS CLI_2993 NC_009699.1 3170930 3172000 D identified by match to protein family HMM TIGR02906; spore coat protein-like protein 3170930..3172000 Clostridium botulinum F str. Langeland 5403066 YP_001392219.1 CDS ppdK NC_009699.1 3172053 3174686 R catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase complement(3172053..3174686) Clostridium botulinum F str. Langeland 5405092 YP_001392220.1 CDS CLI_2995 NC_009699.1 3174766 3175407 R identified by match to protein family HMM PF00571; match to protein family HMM PF08279; hypothetical protein complement(3174766..3175407) Clostridium botulinum F str. Langeland 5402658 YP_001392221.1 CDS CLI_2996 NC_009699.1 3175917 3176537 R identified by match to protein family HMM PF00627; UBA/TS-N domain-containing protein complement(3175917..3176537) Clostridium botulinum F str. Langeland 5401952 YP_001392222.1 CDS era NC_009699.1 3177316 3178206 R Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era complement(3177316..3178206) Clostridium botulinum F str. Langeland 5404516 YP_001392223.1 CDS cdd NC_009699.1 3178222 3178620 R Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis; cytidine deaminase complement(3178222..3178620) Clostridium botulinum F str. Langeland 5405471 YP_001392224.1 CDS CLI_3000 NC_009699.1 3178704 3179402 R identified by match to protein family HMM PF01219; match to protein family HMM PF01569; diacylglycerol kinase/PAP2 family protein complement(3178704..3179402) Clostridium botulinum F str. Langeland 5403874 YP_001392225.1 CDS CLI_3001 NC_009699.1 3179443 3179943 R identified by match to protein family HMM PF02130; match to protein family HMM TIGR00043; metalloprotease complement(3179443..3179943) Clostridium botulinum F str. Langeland 5402123 YP_001392226.1 CDS CLI_3002 NC_009699.1 3179940 3182027 R identified by match to protein family HMM PF01966; match to protein family HMM PF07697; match to protein family HMM PF07698; match to protein family HMM TIGR00277; hydrolase complement(3179940..3182027) Clostridium botulinum F str. Langeland 5404778 YP_001392227.1 CDS CLI_3003 NC_009699.1 3182050 3183210 R identified by match to protein family HMM PF06898; match to protein family HMM TIGR02876; stage IV sporulation protein complement(3182050..3183210) Clostridium botulinum F str. Langeland 5404997 YP_001392228.1 CDS yqfC NC_009699.1 3183200 3183496 R identified by match to protein family HMM PF07241; match to protein family HMM TIGR02856; sporulation protein YqfC complement(3183200..3183496) Clostridium botulinum F str. Langeland 5405248 YP_001392229.1 CDS CLI_3005 NC_009699.1 3183610 3184056 R identified by match to protein family HMM PF02637; GatB/Yqey domain-containing protein complement(3183610..3184056) Clostridium botulinum F str. Langeland 5402932 YP_001392230.1 CDS rpsU NC_009699.1 3184099 3184275 R a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 complement(3184099..3184275) Clostridium botulinum F str. Langeland 5405552 YP_001392231.1 CDS CLI_3007 NC_009699.1 3184412 3184756 R identified by match to protein family HMM PF01230; HIT family protein complement(3184412..3184756) Clostridium botulinum F str. Langeland 5404321 YP_001392232.1 CDS CLI_3008 NC_009699.1 3184813 3186111 R identified by match to protein family HMM PF00919; match to protein family HMM PF04055; match to protein family HMM TIGR00089; match to protein family HMM TIGR01579; RNA modification protein complement(3184813..3186111) Clostridium botulinum F str. Langeland 5405501 YP_001392233.1 CDS CLI_3009 NC_009699.1 3186111 3186869 R in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE complement(3186111..3186869) Clostridium botulinum F str. Langeland 5402579 YP_001392234.1 CDS prmA NC_009699.1 3186967 3187905 R methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; 50S ribosomal protein L11 methyltransferase complement(3186967..3187905) Clostridium botulinum F str. Langeland 5404069 YP_001392235.1 CDS dnaJ NC_009699.1 3188213 3189358 R chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ complement(3188213..3189358) Clostridium botulinum F str. Langeland 5402981 YP_001392236.1 CDS dnaK NC_009699.1 3189501 3191372 R heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK complement(3189501..3191372) Clostridium botulinum F str. Langeland 5405613 YP_001392237.1 CDS grpE NC_009699.1 3191427 3192071 R with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE complement(3191427..3192071) Clostridium botulinum F str. Langeland 5405602 YP_001392238.1 CDS hrcA NC_009699.1 3192098 3193129 R Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor complement(3192098..3193129) Clostridium botulinum F str. Langeland 5405160 YP_001392239.1 CDS CLI_3015 NC_009699.1 3193330 3194472 R catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase complement(3193330..3194472) Clostridium botulinum F str. Langeland 5403323 YP_001392240.1 CDS lepA NC_009699.1 3194499 3196307 R binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA complement(3194499..3196307) Clostridium botulinum F str. Langeland 5402300 YP_001392241.1 CDS CLI_3017 NC_009699.1 3196448 3196843 R hypothetical protein complement(3196448..3196843) Clostridium botulinum F str. Langeland 5404738 YP_001392242.1 CDS CLI_3018 NC_009699.1 3196913 3198004 R identified by match to protein family HMM PF07454; match to protein family HMM TIGR02867; stage II sporulation protein complement(3196913..3198004) Clostridium botulinum F str. Langeland 5402399 YP_001392243.1 CDS gpr NC_009699.1 3198178 3199152 R Initiates the rapid degradation of small, acid-soluble proteins during spore germination; germination protease complement(3198178..3199152) Clostridium botulinum F str. Langeland 5403998 YP_001392244.1 CDS rpsT NC_009699.1 3199362 3199628 D binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 3199362..3199628 Clostridium botulinum F str. Langeland 5402403 YP_001392245.1 CDS holA NC_009699.1 3199663 3200694 R required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta complement(3199663..3200694) Clostridium botulinum F str. Langeland 5401957 YP_001392246.1 CDS CLI_3022 NC_009699.1 3200723 3202510 R identified by match to protein family HMM PF03772; match to protein family HMM TIGR00360; ComEC/Rec2 family protein complement(3200723..3202510) Clostridium botulinum F str. Langeland 5403983 YP_001392247.1 CDS CLI_3023 NC_009699.1 3202522 3202752 R hypothetical protein complement(3202522..3202752) Clostridium botulinum F str. Langeland 5403130 YP_001392248.1 CDS CLI_3024 NC_009699.1 3202857 3205451 R identified by match to protein family HMM PF00122; match to protein family HMM PF00690; cation transporting ATPase complement(3202857..3205451) Clostridium botulinum F str. Langeland 5403014 YP_001392249.1 CDS CLI_3025 NC_009699.1 3205959 3206888 R identified by match to protein family HMM PF07556; hypothetical protein complement(3205959..3206888) Clostridium botulinum F str. Langeland 5404515 YP_001392250.1 CDS CLI_3026 NC_009699.1 3206941 3207531 D identified by Glimmer3; hypothetical protein 3206941..3207531 Clostridium botulinum F str. Langeland 5402204 YP_001392251.1 CDS selB NC_009699.1 3208973 3210880 R identified by match to protein family HMM PF00009; match to protein family HMM PF03144; match to protein family HMM PF09106; match to protein family HMM PF09107; match to protein family HMM TIGR00231; match to protein family HMM TIGR00475; selenocysteine-specific translation elongation factor complement(3208973..3210880) Clostridium botulinum F str. Langeland 5402960 YP_001392252.1 CDS selA NC_009699.1 3210899 3212287 R catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis; selenocysteine synthase complement(3210899..3212287) Clostridium botulinum F str. Langeland 5404272 YP_001392254.1 CDS CLI_3032 NC_009699.1 3213539 3214147 R identified by match to protein family HMM PF00633; match to protein family HMM TIGR00426; comE operon protein 1 complement(3213539..3214147) Clostridium botulinum F str. Langeland 5403291 YP_001392255.1 CDS CLI_3033 NC_009699.1 3214336 3215583 D identified by match to protein family HMM PF00768; D-alanyl-D-alanine carboxypeptidase 3214336..3215583 Clostridium botulinum F str. Langeland 5404669 YP_001392256.1 CDS CLI_3034 NC_009699.1 3215691 3216593 R identified by match to protein family HMM PF00849; match to protein family HMM TIGR00005; RluA family pseudouridine synthase complement(3215691..3216593) Clostridium botulinum F str. Langeland 5404551 YP_001392257.1 CDS CLI_3035 NC_009699.1 3216919 3217299 R identified by match to protein family HMM PF01042; match to protein family HMM TIGR00004; endoribonuclease L-PSP complement(3216919..3217299) Clostridium botulinum F str. Langeland 5402633 YP_001392258.1 CDS CLI_3036 NC_009699.1 3217315 3218589 R identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350; cell envelope-related function transcriptional attenuator complement(3217315..3218589) Clostridium botulinum F str. Langeland 5402907 YP_001392259.1 CDS CLI_3037 NC_009699.1 3218600 3219169 R identified by match to protein family HMM PF01966; match to protein family HMM TIGR00277; match to protein family HMM TIGR00488; HDIG domain-containing protein complement(3218600..3219169) Clostridium botulinum F str. Langeland 5405428 YP_001392260.1 CDS nadD NC_009699.1 3219252 3219857 R transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria; nicotinic acid mononucleotide adenylyltransferase complement(3219252..3219857) Clostridium botulinum F str. Langeland 5402267 YP_001392261.1 CDS CLI_3039 NC_009699.1 3220100 3220393 R identified by match to protein family HMM PF01985; match to protein family HMM TIGR00253; RNA-binding protein complement(3220100..3220393) Clostridium botulinum F str. Langeland 5403000 YP_001392262.1 CDS obgE NC_009699.1 3220420 3221694 R essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE complement(3220420..3221694) Clostridium botulinum F str. Langeland 5404603 YP_001392263.1 CDS rpmA NC_009699.1 3222073 3222375 R involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 complement(3222073..3222375) Clostridium botulinum F str. Langeland 5403404 YP_001392264.1 CDS CLI_3042 NC_009699.1 3222378 3222704 R identified by match to protein family HMM PF04327; hypothetical protein complement(3222378..3222704) Clostridium botulinum F str. Langeland 5402889 YP_001392265.1 CDS rplU NC_009699.1 3222707 3223021 R identified by match to protein family HMM PF00829; match to protein family HMM TIGR00061; 50S ribosomal protein L21 complement(3222707..3223021) Clostridium botulinum F str. Langeland 5402092 YP_001392266.1 CDS CLI_3044 NC_009699.1 3223145 3224584 R identified by match to protein family HMM PF00575; match to protein family HMM TIGR00757; ribonuclease complement(3223145..3224584) Clostridium botulinum F str. Langeland 5403125 YP_001392267.1 CDS CLI_3045 NC_009699.1 3224753 3225460 R hypothetical protein complement(3224753..3225460) Clostridium botulinum F str. Langeland 5403068 YP_001392268.1 CDS CLI_3046 NC_009699.1 3225444 3227294 R identified by match to protein family HMM PF04055; radical SAM domain-containing protein complement(3225444..3227294) Clostridium botulinum F str. Langeland 5404414 YP_001392269.1 CDS CLI_3047 NC_009699.1 3227407 3228258 R identified by match to protein family HMM PF02163; metalloprotease complement(3227407..3228258) Clostridium botulinum F str. Langeland 5403829 YP_001392270.1 CDS CLI_3048 NC_009699.1 3228313 3229098 R identified by match to protein family HMM PF01551; M24/M37 family peptidase complement(3228313..3229098) Clostridium botulinum F str. Langeland 5404024 YP_001392271.1 CDS rodA-2 NC_009699.1 3229418 3230536 R identified by match to protein family HMM PF01098; match to protein family HMM TIGR02210; rod shape-determining protein RodA complement(3229418..3230536) Clostridium botulinum F str. Langeland 5403180 YP_001392272.1 CDS minE NC_009699.1 3230635 3230898 R works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE complement(3230635..3230898) Clostridium botulinum F str. Langeland 5405455 YP_001392273.1 CDS minD NC_009699.1 3230912 3231709 R identified by match to protein family HMM PF01656; match to protein family HMM TIGR01968; septum site-determining protein MinD complement(3230912..3231709) Clostridium botulinum F str. Langeland 5402100 YP_001392274.1 CDS minC NC_009699.1 3231727 3232356 R blocks the formation of polar Z-ring septums; septum formation inhibitor complement(3231727..3232356) Clostridium botulinum F str. Langeland 5403203 YP_001392275.1 CDS CLI_3053 NC_009699.1 3232531 3235305 R identified by match to protein family HMM PF00905; match to protein family HMM PF03717; penicillin-binding protein complement(3232531..3235305) Clostridium botulinum F str. Langeland 5402975 YP_001392276.1 CDS mreD NC_009699.1 3235325 3235816 R identified by match to protein family HMM PF04093; match to protein family HMM TIGR03426; rod shape-determining protein MreD complement(3235325..3235816) Clostridium botulinum F str. Langeland 5403830 YP_001392277.1 CDS mreC NC_009699.1 3235827 3236672 R in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC complement(3235827..3236672) Clostridium botulinum F str. Langeland 5401934 YP_001392278.1 CDS CLI_3056 NC_009699.1 3236679 3237689 R functions in MreBCD complex in some organisms; rod shape-determining protein MreB complement(3236679..3237689) Clostridium botulinum F str. Langeland 5405100 YP_001392279.1 CDS radC NC_009699.1 3237718 3238404 R Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC complement(3237718..3238404) Clostridium botulinum F str. Langeland 5403216 YP_001392280.1 CDS maf NC_009699.1 3238419 3239003 R Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein complement(3238419..3239003) Clostridium botulinum F str. Langeland 5403269 YP_001392281.1 CDS CLI_3059 NC_009699.1 3239019 3239276 R hypothetical protein complement(3239019..3239276) Clostridium botulinum F str. Langeland 5402877 YP_001392282.1 CDS CLI_3060 NC_009699.1 3239386 3240087 R hypothetical protein complement(3239386..3240087) Clostridium botulinum F str. Langeland 5403481 YP_001392283.1 CDS CLI_3061 NC_009699.1 3240313 3240852 R hypothetical protein complement(3240313..3240852) Clostridium botulinum F str. Langeland 5401912 YP_001392284.1 CDS CLI_3062 NC_009699.1 3241278 3241832 D identified by match to protein family HMM PF02567; hypothetical protein 3241278..3241832 Clostridium botulinum F str. Langeland 5402323 YP_001392285.1 CDS pheB NC_009699.1 3241891 3242328 R identified by match to protein family HMM PF01842; hypothetical protein complement(3241891..3242328) Clostridium botulinum F str. Langeland 5403609 YP_001392286.1 CDS CLI_3064 NC_009699.1 3242385 3242519 R identified by Glimmer3; hypothetical protein complement(3242385..3242519) Clostridium botulinum F str. Langeland 5404624 YP_001392287.1 CDS CLI_3066 NC_009699.1 3243063 3243608 R identified by match to protein family HMM PF01464; transglycosylase complement(3243063..3243608) Clostridium botulinum F str. Langeland 5402959 YP_001392288.1 CDS coaE NC_009699.1 3243626 3244264 R catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase complement(3243626..3244264) Clostridium botulinum F str. Langeland 5402982 YP_001392289.1 CDS polA-2 NC_009699.1 3244276 3246903 R has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I complement(3244276..3246903) Clostridium botulinum F str. Langeland 5405447 YP_001392290.1 CDS aroC NC_009699.1 3246921 3248045 R catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase complement(3246921..3248045) Clostridium botulinum F str. Langeland 5405320 YP_001392291.1 CDS CLI_3070 NC_009699.1 3248444 3249223 R identified by match to protein family HMM PF01520; match to protein family HMM PF08239; endolysin complement(3248444..3249223) Clostridium botulinum F str. Langeland 5403150 YP_001392292.1 CDS CLI_3071 NC_009699.1 3249370 3249564 R hypothetical protein complement(3249370..3249564) Clostridium botulinum F str. Langeland 5404308 YP_001392293.1 CDS CLI_3072 NC_009699.1 3249583 3249837 R hypothetical protein complement(3249583..3249837) Clostridium botulinum F str. Langeland 5405065 YP_001392294.1 CDS CLI_3073 NC_009699.1 3249990 3250913 R hypothetical protein complement(3249990..3250913) Clostridium botulinum F str. Langeland 5403981 YP_001392295.1 CDS CLI_3074 NC_009699.1 3250983 3252266 R identified by match to protein family HMM PF00754; cell adhesion domain-containing protein complement(3250983..3252266) Clostridium botulinum F str. Langeland 5402986 YP_001392296.1 CDS CLI_3075 NC_009699.1 3252280 3253023 R cell adhesion domain-containing protein complement(3252280..3253023) Clostridium botulinum F str. Langeland 5402646 YP_001392297.1 CDS CLI_3076 NC_009699.1 3253026 3253727 R identified by Glimmer3; hypothetical protein complement(3253026..3253727) Clostridium botulinum F str. Langeland 5403735 YP_001392298.1 CDS CLI_3077 NC_009699.1 3253808 3254893 R hypothetical protein complement(3253808..3254893) Clostridium botulinum F str. Langeland 5402553 YP_001392299.1 CDS CLI_3078 NC_009699.1 3254905 3255903 R hypothetical protein complement(3254905..3255903) Clostridium botulinum F str. Langeland 5404422 YP_001392300.1 CDS CLI_3079 NC_009699.1 3255915 3256169 R identified by Glimmer3; hypothetical protein complement(3255915..3256169) Clostridium botulinum F str. Langeland 5402817 YP_001392301.1 CDS CLI_3080 NC_009699.1 3256175 3258070 R hypothetical protein complement(3256175..3258070) Clostridium botulinum F str. Langeland 5405415 YP_001392302.1 CDS CLI_3081 NC_009699.1 3258085 3259338 R hypothetical protein complement(3258085..3259338) Clostridium botulinum F str. Langeland 5402133 YP_001392303.1 CDS CLI_3082 NC_009699.1 3259361 3260329 R hypothetical protein complement(3259361..3260329) Clostridium botulinum F str. Langeland 5404177 YP_001392304.1 CDS CLI_3083 NC_009699.1 3260331 3261680 R identified by match to protein family HMM PF00656; hypothetical protein complement(3260331..3261680) Clostridium botulinum F str. Langeland 5405341 YP_001392305.1 CDS CLI_3084 NC_009699.1 3261695 3262036 R hypothetical protein complement(3261695..3262036) Clostridium botulinum F str. Langeland 5404505 YP_001392306.1 CDS CLI_3085 NC_009699.1 3262049 3263134 R hypothetical protein complement(3262049..3263134) Clostridium botulinum F str. Langeland 5402347 YP_001392307.1 CDS CLI_3086 NC_009699.1 3263121 3263555 R identified by Glimmer3; hypothetical protein complement(3263121..3263555) Clostridium botulinum F str. Langeland 5404368 YP_001392308.1 CDS CLI_3087 NC_009699.1 3263568 3264971 R phage protein complement(3263568..3264971) Clostridium botulinum F str. Langeland 5405339 YP_001392309.1 CDS CLI_3088 NC_009699.1 3265047 3265214 R identified by Glimmer3; hypothetical protein complement(3265047..3265214) Clostridium botulinum F str. Langeland 5404944 YP_001392310.1 CDS CLI_3089 NC_009699.1 3265249 3265665 R hypothetical protein complement(3265249..3265665) Clostridium botulinum F str. Langeland 5404713 YP_001392311.1 CDS CLI_3090 NC_009699.1 3265680 3266567 R hypothetical protein complement(3265680..3266567) Clostridium botulinum F str. Langeland 5404437 YP_001392312.1 CDS CLI_3091 NC_009699.1 3266572 3266991 R hypothetical protein complement(3266572..3266991) Clostridium botulinum F str. Langeland 5402472 YP_001392313.1 CDS CLI_3092 NC_009699.1 3266997 3267344 R hypothetical protein complement(3266997..3267344) Clostridium botulinum F str. Langeland 5405319 YP_001392314.1 CDS CLI_3093 NC_009699.1 3267349 3267714 R hypothetical protein complement(3267349..3267714) Clostridium botulinum F str. Langeland 5403779 YP_001392315.1 CDS CLI_3094 NC_009699.1 3267714 3267998 R identified by Glimmer3; hypothetical protein complement(3267714..3267998) Clostridium botulinum F str. Langeland 5402023 YP_001392316.1 CDS CLI_3095 NC_009699.1 3268502 3269023 R hypothetical protein complement(3268502..3269023) Clostridium botulinum F str. Langeland 5405190 YP_001392317.1 CDS CLI_3096 NC_009699.1 3269137 3269457 R hypothetical protein complement(3269137..3269457) Clostridium botulinum F str. Langeland 5404822 YP_001392318.1 CDS CLI_3097 NC_009699.1 3269514 3270314 R hypothetical protein complement(3269514..3270314) Clostridium botulinum F str. Langeland 5405129 YP_001392319.1 CDS CLI_3098 NC_009699.1 3270304 3271209 R identified by match to protein family HMM TIGR01714; phage replisome organizer complement(3270304..3271209) Clostridium botulinum F str. Langeland 5405288 YP_001392320.1 CDS CLI_3099 NC_009699.1 3271303 3271515 R DNA-binding protein complement(3271303..3271515) Clostridium botulinum F str. Langeland 5404099 YP_001392321.1 CDS CLI_3100 NC_009699.1 3271577 3271786 R identified by match to protein family HMM PF01381; DNA-binding protein complement(3271577..3271786) Clostridium botulinum F str. Langeland 5404511 YP_001392322.1 CDS CLI_3101 NC_009699.1 3271978 3272388 D identified by match to protein family HMM PF01381; DNA-binding protein 3271978..3272388 Clostridium botulinum F str. Langeland 5403455 YP_001392323.1 CDS CLI_3102 NC_009699.1 3272690 3272839 D identified by Glimmer3; hypothetical protein 3272690..3272839 Clostridium botulinum F str. Langeland 5404980 YP_001392324.1 CDS CLI_3105 NC_009699.1 3273921 3275408 D identified by match to protein family HMM PF03062; alginate O-acetyltransferase AlgI 3273921..3275408 Clostridium botulinum F str. Langeland 5403292 YP_001392325.1 CDS CLI_3106 NC_009699.1 3275421 3276872 D identified by Glimmer3; hypothetical protein 3275421..3276872 Clostridium botulinum F str. Langeland 5403452 YP_001392326.1 CDS CLI_3107 NC_009699.1 3277043 3277246 R identified by match to protein family HMM PF00269; small, acid-soluble spore protein complement(3277043..3277246) Clostridium botulinum F str. Langeland 5403834 YP_001392327.1 CDS CLI_3108 NC_009699.1 3277431 3277571 R identified by Glimmer3; hypothetical protein complement(3277431..3277571) Clostridium botulinum F str. Langeland 5403804 YP_001392328.1 CDS CLI_3109 NC_009699.1 3277811 3277930 R identified by Glimmer3; hypothetical protein complement(3277811..3277930) Clostridium botulinum F str. Langeland 5403575 YP_001392329.1 CDS CLI_3110 NC_009699.1 3277987 3278277 R identified by Glimmer3; hypothetical protein complement(3277987..3278277) Clostridium botulinum F str. Langeland 5403868 YP_001392330.1 CDS CLI_3111 NC_009699.1 3278419 3278547 R identified by Glimmer3; hypothetical protein complement(3278419..3278547) Clostridium botulinum F str. Langeland 5405102 YP_001392331.1 CDS CLI_3112 NC_009699.1 3278719 3279147 D identified by match to protein family HMM PF04246; sigma-E factor regulator 3278719..3279147 Clostridium botulinum F str. Langeland 5402128 YP_001392332.1 CDS aspS NC_009699.1 3279182 3280963 R catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase complement(3279182..3280963) Clostridium botulinum F str. Langeland 5404035 YP_001392333.1 CDS hisS NC_009699.1 3281004 3282251 R catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase complement(3281004..3282251) Clostridium botulinum F str. Langeland 5403652 YP_001392334.1 CDS CLI_3115 NC_009699.1 3282270 3283700 R catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase complement(3282270..3283700) Clostridium botulinum F str. Langeland 5403222 YP_001392335.1 CDS CLI_3116 NC_009699.1 3283738 3284337 R identified by match to protein family HMM PF00753; metallo-beta-lactamase family protein complement(3283738..3284337) Clostridium botulinum F str. Langeland 5405354 YP_001392336.1 CDS dtd NC_009699.1 3284399 3284848 R hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase complement(3284399..3284848) Clostridium botulinum F str. Langeland 5405434 YP_001392337.1 CDS relA NC_009699.1 3284891 3287062 R identified by match to protein family HMM PF01966; match to protein family HMM PF02824; match to protein family HMM PF04607; match to protein family HMM TIGR00691; GTP pyrophosphokinase complement(3284891..3287062) Clostridium botulinum F str. Langeland 5402369 YP_001392338.1 CDS apt NC_009699.1 3287186 3287704 R catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase complement(3287186..3287704) Clostridium botulinum F str. Langeland 5403248 YP_001392339.1 CDS CLI_3120 NC_009699.1 3287813 3288691 R identified by match to protein family HMM PF01368; DHH domain-containing protein complement(3287813..3288691) Clostridium botulinum F str. Langeland 5402930 YP_001392340.1 CDS secF NC_009699.1 3288920 3289783 R forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF complement(3288920..3289783) Clostridium botulinum F str. Langeland 5402019 YP_001392341.1 CDS secD NC_009699.1 3289785 3291053 R part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD complement(3289785..3291053) Clostridium botulinum F str. Langeland 5403653 YP_001392342.1 CDS CLI_3123 NC_009699.1 3291147 3292514 R identified by match to protein family HMM PF04055; radical SAM domain-containing protein complement(3291147..3292514) Clostridium botulinum F str. Langeland 5403671 YP_001392343.1 CDS CLI_3124 NC_009699.1 3292671 3292808 R identified by Glimmer3; hypothetical protein complement(3292671..3292808) Clostridium botulinum F str. Langeland 5402036 YP_001392344.1 CDS CLI_3125 NC_009699.1 3292898 3293266 R hypothetical protein complement(3292898..3293266) Clostridium botulinum F str. Langeland 5402351 YP_001392345.1 CDS yajC NC_009699.1 3293321 3293656 R member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC complement(3293321..3293656) Clostridium botulinum F str. Langeland 5402662 YP_001392346.1 CDS tgt NC_009699.1 3293836 3294966 R Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase complement(3293836..3294966) Clostridium botulinum F str. Langeland 5403808 YP_001392347.1 CDS queA NC_009699.1 3295022 3296047 R Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase complement(3295022..3296047) Clostridium botulinum F str. Langeland 5402276 YP_001392348.1 CDS ruvB NC_009699.1 3296081 3297109 R promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB complement(3296081..3297109) Clostridium botulinum F str. Langeland 5404698 YP_001392349.1 CDS ruvA NC_009699.1 3297129 3297722 R plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA complement(3297129..3297722) Clostridium botulinum F str. Langeland 5403511 YP_001392350.1 CDS CLI_3131 NC_009699.1 3297902 3298513 R hypothetical protein complement(3297902..3298513) Clostridium botulinum F str. Langeland 5403757 YP_001392351.1 CDS CLI_3132 NC_009699.1 3298891 3299631 R identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033; hypothetical protein complement(3298891..3299631) Clostridium botulinum F str. Langeland 5403147 YP_001392352.1 CDS CLI_3133 NC_009699.1 3299782 3300432 R identified by match to protein family HMM PF01205; match to protein family HMM PF09186; match to protein family HMM TIGR00257; hypothetical protein complement(3299782..3300432) Clostridium botulinum F str. Langeland 5404063 YP_001392353.1 CDS CLI_3134 NC_009699.1 3300448 3301110 R identified by match to protein family HMM PF03130; PBS lyase complement(3300448..3301110) Clostridium botulinum F str. Langeland 5402785 YP_001392354.1 CDS CLI_3135 NC_009699.1 3301329 3302747 R identified by match to protein family HMM PF00155; match to protein family HMM PF00392; GntR family transcriptional regulator complement(3301329..3302747) Clostridium botulinum F str. Langeland 5404622 YP_001392355.1 CDS CLI_3136 NC_009699.1 3303034 3303927 R identified by match to protein family HMM PF01909; nucleotidyltransferase domain-containing protein complement(3303034..3303927) Clostridium botulinum F str. Langeland 5403658 YP_001392356.1 CDS CLI_3137 NC_009699.1 3304077 3304298 R hypothetical protein complement(3304077..3304298) Clostridium botulinum F str. Langeland 5404995 YP_001392357.1 CDS CLI_3138 NC_009699.1 3304471 3304629 R identified by match to protein family HMM PF00301; rubredoxin complement(3304471..3304629) Clostridium botulinum F str. Langeland 5403315 YP_001392358.1 CDS CLI_3139 NC_009699.1 3304758 3306542 R identified by match to protein family HMM PF01926; match to protein family HMM TIGR00231; match to protein family HMM TIGR03156; GTP-binding protein complement(3304758..3306542) Clostridium botulinum F str. Langeland 5401879 YP_001392359.1 CDS hpt-1 NC_009699.1 3306684 3307208 D identified by match to protein family HMM PF00156; match to protein family HMM TIGR01203; hypoxanthine phosphoribosyltransferase 3306684..3307208 Clostridium botulinum F str. Langeland 5402529 YP_001392360.1 CDS CLI_3141 NC_009699.1 3307245 3307799 R identified by match to protein family HMM TIGR02832; hypothetical protein complement(3307245..3307799) Clostridium botulinum F str. Langeland 5404583 YP_001392361.1 CDS CLI_3142 NC_009699.1 3308071 3310554 D identified by match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM TIGR02074; 1A family penicillin-binding protein 3308071..3310554 Clostridium botulinum F str. Langeland 5402151 YP_001392362.1 CDS CLI_3143 NC_009699.1 3310584 3310940 R identified by match to protein family HMM PF03862; match to protein family HMM TIGR02839; SpoVA family protein complement(3310584..3310940) Clostridium botulinum F str. Langeland 5405468 YP_001392363.1 CDS CLI_3144 NC_009699.1 3310956 3311963 R identified by match to protein family HMM PF07451; match to protein family HMM TIGR02845; stage V sporulation protein AD complement(3310956..3311963) Clostridium botulinum F str. Langeland 5403657 YP_001392364.1 CDS CLI_3145 NC_009699.1 3311986 3312441 R identified by match to protein family HMM PF03862; match to protein family HMM TIGR02838; SpoVA family protein complement(3311986..3312441) Clostridium botulinum F str. Langeland 5402774 YP_001392365.1 CDS sigF NC_009699.1 3312643 3313398 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the prespore at the onset of sporulation. Interaction with spoIIAB inhibits sigma F activity throughout the cell before the formation of the asymmetric septum; after septation the interaction is confined to the mother cell, and sigma F activity is released in the prespore.; sporulation sigma factor SigF complement(3312643..3313398) Clostridium botulinum F str. Langeland 5403857 YP_001392366.1 CDS spoIIAB NC_009699.1 3313417 3313839 R binds to sigma F preventing its association with RNA polymerase during sporulation; anti-sigma F factor complement(3313417..3313839) Clostridium botulinum F str. Langeland 5403789 YP_001392367.1 CDS spoIIAA NC_009699.1 3313856 3314191 R identified by match to protein family HMM PF01740; match to protein family HMM TIGR00377; match to protein family HMM TIGR02886; anti-sigma F factor antagonist complement(3313856..3314191) Clostridium botulinum F str. Langeland 5405374 YP_001392368.1 CDS CLI_3149 NC_009699.1 3314536 3316269 R modification methylase family protein complement(3314536..3316269) Clostridium botulinum F str. Langeland 5402094 YP_001392369.1 CDS CLI_3150 NC_009699.1 3316336 3317310 D identified by match to protein family HMM PF01522; match to protein family HMM TIGR02884; polysaccharide deacetylase 3316336..3317310 Clostridium botulinum F str. Langeland 5403917 YP_001392370.1 CDS CLI_3151 NC_009699.1 3317401 3318117 R identified by match to protein family HMM PF03808; match to protein family HMM TIGR00696; WecB/TagA/CpsF family glycosyl transferase complement(3317401..3318117) Clostridium botulinum F str. Langeland 5403576 YP_001392371.1 CDS CLI_3152 NC_009699.1 3318445 3319098 R identified by match to protein family HMM PF02397; sugar transferase complement(3318445..3319098) Clostridium botulinum F str. Langeland 5402042 YP_001392372.1 CDS CLI_3153 NC_009699.1 3319119 3320543 R identified by match to protein family HMM PF01943; polysaccharide transporter complement(3319119..3320543) Clostridium botulinum F str. Langeland 5403177 YP_001392373.1 CDS mviN NC_009699.1 3320937 3322493 R identified by match to protein family HMM PF01554; match to protein family HMM PF01943; match to protein family HMM PF03023; match to protein family HMM TIGR01695; integral membrane protein MviN complement(3320937..3322493) Clostridium botulinum F str. Langeland 5405527 YP_001392374.1 CDS CLI_3155 NC_009699.1 3322512 3323615 R identified by match to protein family HMM PF00534; glycoside hydrolase family protein complement(3322512..3323615) Clostridium botulinum F str. Langeland 5402545 YP_001392375.1 CDS CLI_3156 NC_009699.1 3323725 3324852 R identified by match to protein family HMM PF00534; glycoside hydrolase family protein complement(3323725..3324852) Clostridium botulinum F str. Langeland 5405022 YP_001392376.1 CDS CLI_3157 NC_009699.1 3324967 3326199 R identified by match to protein family HMM PF04932; exopolysaccharide biosynthesis family protein complement(3324967..3326199) Clostridium botulinum F str. Langeland 5404016 YP_001392377.1 CDS CLI_3158 NC_009699.1 3326277 3327503 R identified by match to protein family HMM PF00534; glycoside hydrolase family protein complement(3326277..3327503) Clostridium botulinum F str. Langeland 5404011 YP_001392378.1 CDS CLI_3159 NC_009699.1 3327522 3328580 R identified by match to protein family HMM PF02350; match to protein family HMM TIGR00236; UDP-N-acetylglucosamine 2-epimerase complement(3327522..3328580) Clostridium botulinum F str. Langeland 5403918 YP_001392379.1 CDS CLI_3160 NC_009699.1 3328580 3329674 R identified by match to protein family HMM PF00534; glycoside hydrolase family protein complement(3328580..3329674) Clostridium botulinum F str. Langeland 5402945 YP_001392380.1 CDS CLI_3161 NC_009699.1 3329697 3330800 R identified by Glimmer3; hypothetical protein complement(3329697..3330800) Clostridium botulinum F str. Langeland 5403504 YP_001392381.1 CDS CLI_3162 NC_009699.1 3330790 3332208 R hypothetical protein complement(3330790..3332208) Clostridium botulinum F str. Langeland 5405181 YP_001392382.1 CDS CLI_3163 NC_009699.1 3332223 3333317 R identified by match to protein family HMM PF00560; internalin complement(3332223..3333317) Clostridium botulinum F str. Langeland 5405531 YP_001392383.1 CDS CLI_3164 NC_009699.1 3333354 3334661 R identified by match to protein family HMM PF01554; match to protein family HMM PF01943; polysaccharide biosynthesis protein complement(3333354..3334661) Clostridium botulinum F str. Langeland 5404940 YP_001392384.1 CDS CLI_3165 NC_009699.1 3334692 3335438 R identified by match to protein family HMM PF00132; acetyltransferase complement(3334692..3335438) Clostridium botulinum F str. Langeland 5404680 YP_001392385.1 CDS CLI_3166 NC_009699.1 3335538 3336647 R identified by match to protein family HMM PF01408; match to protein family HMM PF02894; match to protein family HMM PF03447; NAD-binding Rossmann fold family oxidoreductase complement(3335538..3336647) Clostridium botulinum F str. Langeland 5402321 YP_001392386.1 CDS CLI_3167 NC_009699.1 3336710 3338026 R identified by match to protein family HMM PF00984; match to protein family HMM PF03446; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026; UDP-glucose/GDP-mannose dehydrogenase family protein complement(3336710..3338026) Clostridium botulinum F str. Langeland 5403453 YP_001392387.1 CDS CLI_3168 NC_009699.1 3338156 3340021 R identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; exopolysaccharide biosynthesis protein complement(3338156..3340021) Clostridium botulinum F str. Langeland 5404196 YP_001392388.1 CDS CLI_3169 NC_009699.1 3340199 3343087 R identified by match to protein family HMM PF01520; match to protein family HMM PF07495; N-acetylmuramoyl-L-alanine amidase complement(3340199..3343087) Clostridium botulinum F str. Langeland 5402976 YP_001392389.1 CDS CLI_3170 NC_009699.1 3343286 3346189 R identified by match to protein family HMM PF01520; match to protein family HMM PF07495; N-acetylmuramoyl-L-alanine amidase complement(3343286..3346189) Clostridium botulinum F str. Langeland 5402985 YP_001392390.1 CDS CLI_3171 NC_009699.1 3346379 3349843 R identified by match to protein family HMM PF01832; match to protein family HMM PF07495; beta-N-acetylglucosaminidase complement(3346379..3349843) Clostridium botulinum F str. Langeland 5405315 YP_001392391.1 CDS galU NC_009699.1 3349942 3350838 R identified by match to protein family HMM PF00483; match to protein family HMM TIGR01099; UTP-glucose-1-phosphate uridylyltransferase complement(3349942..3350838) Clostridium botulinum F str. Langeland 5405541 YP_001392392.1 CDS CLI_3173 NC_009699.1 3350888 3351964 R identified by match to protein family HMM PF00515; match to protein family HMM PF07719; hypothetical protein complement(3350888..3351964) Clostridium botulinum F str. Langeland 5403132 YP_001392393.1 CDS CLI_3174 NC_009699.1 3352109 3353836 R identified by match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; phosphoglucomutase/phosphomannomutase family protein complement(3352109..3353836) Clostridium botulinum F str. Langeland 5402130 YP_001392394.1 CDS CLI_3175 NC_009699.1 3354724 3355260 R the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25 complement(3354724..3355260) Clostridium botulinum F str. Langeland 5402701 YP_001392395.1 CDS CLI_3176 NC_009699.1 3355467 3356927 D identified by match to protein family HMM PF00266; match to protein family HMM PF01212; match to protein family HMM PF01276; match to protein family HMM PF03711; match to protein family HMM PF05889; Orn/Lys/Arg decarboxylase 3355467..3356927 Clostridium botulinum F str. Langeland 5404890 YP_001392396.1 CDS CLI_3177 NC_009699.1 3357113 3357946 R identified by Glimmer3; hypothetical protein complement(3357113..3357946) Clostridium botulinum F str. Langeland 5403116 YP_001392397.1 CDS CLI_3178 NC_009699.1 3358143 3359045 R identified by match to protein family HMM PF01515; phosphate acetyl/butyryl transferase complement(3358143..3359045) Clostridium botulinum F str. Langeland 5404132 YP_001392398.1 CDS CLI_3179 NC_009699.1 3359497 3360510 R identified by match to protein family HMM PF01070; match to protein family HMM PF01180; dehydrogenase, FMN-dependent complement(3359497..3360510) Clostridium botulinum F str. Langeland 5403026 YP_001392399.1 CDS CLI_3180 NC_009699.1 3360746 3361216 R identified by match to protein family HMM PF04463; hypothetical protein complement(3360746..3361216) Clostridium botulinum F str. Langeland 5402792 YP_001392400.1 CDS CLI_3181 NC_009699.1 3361404 3363770 R MutS2; MutS-II; involved in blocking homologous and homeologous recombination; has ATPase activity stimulated by recombination intermediates; inhibits DNA strand exchange; recombination and DNA strand exchange inhibitor protein complement(3361404..3363770) Clostridium botulinum F str. Langeland 5401961 YP_001392401.1 CDS CLI_3182 NC_009699.1 3363903 3366269 R identified by match to protein family HMM PF01136; U32 family peptidase complement(3363903..3366269) Clostridium botulinum F str. Langeland 5403529 YP_001392402.1 CDS CLI_3183 NC_009699.1 3366913 3367791 R hypothetical protein complement(3366913..3367791) Clostridium botulinum F str. Langeland 5404782 YP_001392403.1 CDS CLI_3184 NC_009699.1 3367996 3369771 D identified by Glimmer3; hypothetical protein 3367996..3369771 Clostridium botulinum F str. Langeland 5404278 YP_001392404.1 CDS CLI_3185 NC_009699.1 3369942 3370400 R identified by Glimmer3; hypothetical protein complement(3369942..3370400) Clostridium botulinum F str. Langeland 5402171 YP_001392405.1 CDS CLI_3186 NC_009699.1 3370676 3371155 D identified by match to protein family HMM PF00535; glycosyl transferase family protein 3370676..3371155 Clostridium botulinum F str. Langeland 5405127 YP_001392406.1 CDS CLI_3187 NC_009699.1 3371177 3371767 R identified by match to protein family HMM PF05164; hypothetical protein complement(3371177..3371767) Clostridium botulinum F str. Langeland 5403378 YP_001392407.1 CDS pheT NC_009699.1 3371972 3374353 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta complement(3371972..3374353) Clostridium botulinum F str. Langeland 5403231 YP_001392408.1 CDS pheS NC_009699.1 3374514 3375533 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha complement(3374514..3375533) Clostridium botulinum F str. Langeland 5404675 YP_001392409.1 CDS CLI_3190 NC_009699.1 3375880 3376659 R identified by match to protein family HMM PF00588; match to protein family HMM PF08032; RNA methyltransferase complement(3375880..3376659) Clostridium botulinum F str. Langeland 5404483 YP_001392410.1 CDS CLI_3191 NC_009699.1 3376750 3377412 R identified by match to protein family HMM PF02080; match to protein family HMM PF02254; TrkA family potassium uptake protein complement(3376750..3377412) Clostridium botulinum F str. Langeland 5402581 YP_001392411.1 CDS CLI_3192 NC_009699.1 3377423 3378766 R identified by match to protein family HMM PF02386; TrkH family potassium uptake protein complement(3377423..3378766) Clostridium botulinum F str. Langeland 5404406 YP_001392412.1 CDS rplT NC_009699.1 3378890 3379249 R binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 complement(3378890..3379249) Clostridium botulinum F str. Langeland 5405565 YP_001392413.1 CDS rpmI NC_009699.1 3379279 3379476 R identified by match to protein family HMM PF01632; match to protein family HMM TIGR00001; 50S ribosomal protein L35 complement(3379279..3379476) Clostridium botulinum F str. Langeland 5401910 YP_001392414.1 CDS infC NC_009699.1 3379498 3380052 R IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 complement(3379498..3380052) Clostridium botulinum F str. Langeland 5405481 YP_001392415.1 CDS thrS NC_009699.1 3380307 3382214 R catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase complement(3380307..3382214) Clostridium botulinum F str. Langeland 5405196 YP_001392416.1 CDS CLI_3197 NC_009699.1 3382562 3383461 R identified by match to protein family HMM PF08812; match to protein family HMM TIGR02834; hypothetical protein complement(3382562..3383461) Clostridium botulinum F str. Langeland 5403889 YP_001392417.1 CDS CLI_3198 NC_009699.1 3383616 3384323 D hypothetical protein 3383616..3384323 Clostridium botulinum F str. Langeland 5403371 YP_001392418.1 CDS CLI_3199 NC_009699.1 3384514 3386085 R ABC transporter permease complement(3384514..3386085) Clostridium botulinum F str. Langeland 5404202 YP_001392419.1 CDS CLI_3200 NC_009699.1 3386087 3386782 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(3386087..3386782) Clostridium botulinum F str. Langeland 5403144 YP_001392420.1 CDS hslO NC_009699.1 3387560 3388450 R becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; Hsp33-like chaperonin complement(3387560..3388450) Clostridium botulinum F str. Langeland 5402488 YP_001392421.1 CDS CLI_3209 NC_009699.1 3388488 3389228 R identified by match to protein family HMM PF08241; match to protein family HMM PF08242; hypothetical protein complement(3388488..3389228) Clostridium botulinum F str. Langeland 5402814 YP_001392422.1 CDS CLI_3210 NC_009699.1 3389314 3389586 R small acid-soluble spore protein complement(3389314..3389586) Clostridium botulinum F str. Langeland 5403663 YP_001392423.1 CDS CLI_3211 NC_009699.1 3389886 3390845 R identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; oligopeptide/dipeptide ABC transporter ATP-binding protein complement(3389886..3390845) Clostridium botulinum F str. Langeland 5402476 YP_001392424.1 CDS CLI_3212 NC_009699.1 3390845 3391864 R identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; oligopeptide/dipeptide ABC transporter ATP-binding protein complement(3390845..3391864) Clostridium botulinum F str. Langeland 5404785 YP_001392425.1 CDS CLI_3213 NC_009699.1 3391878 3392795 R identified by match to protein family HMM PF00528; oligopeptide/dipeptide ABC transporter permease complement(3391878..3392795) Clostridium botulinum F str. Langeland 5403048 YP_001392426.1 CDS CLI_3214 NC_009699.1 3392811 3393740 R identified by match to protein family HMM PF00528; oligopeptide/dipeptide ABC transporter permease complement(3392811..3393740) Clostridium botulinum F str. Langeland 5405083 YP_001392427.1 CDS CLI_3215 NC_009699.1 3393821 3395503 R identified by match to protein family HMM PF00496; oligopeptide/dipeptide ABC transporter oligopeptide/dipeptide-binding protein complement(3393821..3395503) Clostridium botulinum F str. Langeland 5402046 YP_001392428.1 CDS asd NC_009699.1 3395987 3396979 D identified by match to protein family HMM PF01118; match to protein family HMM PF02774; match to protein family HMM TIGR01296; aspartate-semialdehyde dehydrogenase 3395987..3396979 Clostridium botulinum F str. Langeland 5404992 YP_001392429.1 CDS dapA NC_009699.1 3397002 3397880 D catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 3397002..3397880 Clostridium botulinum F str. Langeland 5405633 YP_001392430.1 CDS dapB-2 NC_009699.1 3398103 3398858 D catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 3398103..3398858 Clostridium botulinum F str. Langeland 5405597 YP_001392431.1 CDS CLI_3219 NC_009699.1 3399398 3400567 R identified by match to protein family HMM PF00155; aminotransferase, classes I and II complement(3399398..3400567) Clostridium botulinum F str. Langeland 5402612 YP_001392432.1 CDS CLI_3220 NC_009699.1 3400825 3401535 D identified by match to protein family HMM PF00132; match to protein family HMM PF08503; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 3400825..3401535 Clostridium botulinum F str. Langeland 5401887 YP_001392433.1 CDS CLI_3221 NC_009699.1 3401651 3402352 R binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein complement(3401651..3402352) Clostridium botulinum F str. Langeland 5402842 YP_001392434.1 CDS CLI_3222 NC_009699.1 3402430 3402927 R hypothetical protein complement(3402430..3402927) Clostridium botulinum F str. Langeland 5405281 YP_001392435.1 CDS CLI_3223 NC_009699.1 3403126 3403878 R identified by match to protein family HMM PF01522; match to protein family HMM TIGR02764; polysaccharide deacetylase complement(3403126..3403878) Clostridium botulinum F str. Langeland 5403250 YP_001392436.1 CDS CLI_3224 NC_009699.1 3404042 3404569 D hypothetical protein 3404042..3404569 Clostridium botulinum F str. Langeland 5404151 YP_001392437.1 CDS CLI_3225 NC_009699.1 3404572 3405456 R hypothetical protein complement(3404572..3405456) Clostridium botulinum F str. Langeland 5402404 YP_001392438.1 CDS CLI_3226 NC_009699.1 3405596 3405856 D hypothetical protein 3405596..3405856 Clostridium botulinum F str. Langeland 5401861 YP_001392439.1 CDS folC NC_009699.1 3405865 3407154 R identified by match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01499; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase complement(3405865..3407154) Clostridium botulinum F str. Langeland 5403967 YP_001392440.1 CDS valS NC_009699.1 3407730 3410375 R valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase complement(3407730..3410375) Clostridium botulinum F str. Langeland 5401866 YP_001392441.1 CDS CLI_3229 NC_009699.1 3410396 3410902 R identified by match to protein family HMM PF00583; acetyltransferase complement(3410396..3410902) Clostridium botulinum F str. Langeland 5403963 YP_001392442.1 CDS CLI_3230 NC_009699.1 3411489 3412733 R identified by match to protein family HMM PF00082; S8/S53 family peptidase complement(3411489..3412733) Clostridium botulinum F str. Langeland 5405437 YP_001392443.1 CDS CLI_3231 NC_009699.1 3412733 3413017 R identified by Glimmer3; hypothetical protein complement(3412733..3413017) Clostridium botulinum F str. Langeland 5405482 YP_001392444.1 CDS CLI_3232 NC_009699.1 3413285 3413410 R identified by Glimmer3; hypothetical protein complement(3413285..3413410) Clostridium botulinum F str. Langeland 5402757 YP_001392445.1 CDS CLI_3233 NC_009699.1 3413798 3414913 R identified by similarity to GB:CAJ66982.1; hypothetical protein complement(3413798..3414913) Clostridium botulinum F str. Langeland 5404452 YP_001392446.1 CDS CLI_3234 NC_009699.1 3414954 3416360 R identified by match to protein family HMM PF04055; radical SAM domain-containing protein complement(3414954..3416360) Clostridium botulinum F str. Langeland 5403647 YP_001392447.1 CDS CLI_3235 NC_009699.1 3416450 3416647 R identified by Glimmer3; hypothetical protein complement(3416450..3416647) Clostridium botulinum F str. Langeland 5403181 YP_001392448.1 CDS CLI_3236 NC_009699.1 3416768 3418564 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(3416768..3418564) Clostridium botulinum F str. Langeland 5403809 YP_001392449.1 CDS CLI_3237 NC_009699.1 3419185 3419841 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(3419185..3419841) Clostridium botulinum F str. Langeland 5404845 YP_001392450.1 CDS CLI_3238 NC_009699.1 3419857 3422454 R identified by match to protein family HMM PF02687; ABC transporter permease complement(3419857..3422454) Clostridium botulinum F str. Langeland 5402143 YP_001392451.1 CDS CLI_3239 NC_009699.1 3422888 3423133 D ABC transporter substrate-binding protein 3422888..3423133 Clostridium botulinum F str. Langeland 5403154 YP_001392452.1 CDS CLI_3240 NC_009699.1 3423167 3423301 R identified by Glimmer3; hypothetical protein complement(3423167..3423301) Clostridium botulinum F str. Langeland 5401963 YP_001392453.1 CDS CLI_3241 NC_009699.1 3423623 3423859 D identified by match to protein family HMM PF01381; DNA-binding protein 3423623..3423859 Clostridium botulinum F str. Langeland 5405350 YP_001392454.1 CDS CLI_3242 NC_009699.1 3423931 3424212 D identified by match to protein family HMM PF01381; DNA-binding protein 3423931..3424212 Clostridium botulinum F str. Langeland 5404057 YP_001392455.1 CDS CLI_3243 NC_009699.1 3424233 3424706 R identified by match to protein family HMM PF01336; DNA binding protein complement(3424233..3424706) Clostridium botulinum F str. Langeland 5403485 YP_001392456.1 CDS CLI_3244 NC_009699.1 3424783 3424932 R identified by Glimmer3; hypothetical protein complement(3424783..3424932) Clostridium botulinum F str. Langeland 5404322 YP_001392457.1 CDS CLI_3245 NC_009699.1 3424910 3425818 R identified by match to protein family HMM PF01076; plasmid recombination enzyme complement(3424910..3425818) Clostridium botulinum F str. Langeland 5402013 YP_001392458.1 CDS CLI_3246 NC_009699.1 3425809 3427434 R identified by match to protein family HMM PF02534; TraG/TraD family protein complement(3425809..3427434) Clostridium botulinum F str. Langeland 5403958 YP_001392459.1 CDS CLI_3247 NC_009699.1 3427869 3428069 R identified by match to protein family HMM PF01381; DNA-binding protein complement(3427869..3428069) Clostridium botulinum F str. Langeland 5403509 YP_001392460.1 CDS CLI_3248 NC_009699.1 3428309 3428710 R identified by similarity to SP:P07945; match to protein family HMM PF00239; resolvase domain-containing protein complement(3428309..3428710) Clostridium botulinum F str. Langeland 5403008 YP_001392461.1 CDS CLI_3249 NC_009699.1 3428756 3429001 R identified by Glimmer3; hypothetical protein complement(3428756..3429001) Clostridium botulinum F str. Langeland 5405595 YP_001392462.1 CDS CLI_3250 NC_009699.1 3429014 3429196 R identified by similarity to GB:CAC97788.1; hypothetical protein complement(3429014..3429196) Clostridium botulinum F str. Langeland 5402467 YP_001392463.1 CDS CLI_3251 NC_009699.1 3429817 3430554 R identified by Glimmer3; hypothetical protein complement(3429817..3430554) Clostridium botulinum F str. Langeland 5403092 YP_001392464.1 CDS CLI_3252 NC_009699.1 3430707 3431609 R identified by match to protein family HMM PF01510; match to protein family HMM PF08239; N-acetylmuramoyl-L-alanine amidase complement(3430707..3431609) Clostridium botulinum F str. Langeland 5403006 YP_001392465.1 CDS CLI_3253 NC_009699.1 3431749 3432165 R identified by match to protein family HMM PF05105; match to protein family HMM TIGR01593; toxin secretion/phage lysis holin complement(3431749..3432165) Clostridium botulinum F str. Langeland 5403698 YP_001392466.1 CDS CLI_3254 NC_009699.1 3432262 3432384 R identified by Glimmer3; hypothetical protein complement(3432262..3432384) Clostridium botulinum F str. Langeland 5405605 YP_001392467.1 CDS CLI_3255 NC_009699.1 3432377 3432772 R identified by Glimmer3; hypothetical protein complement(3432377..3432772) Clostridium botulinum F str. Langeland 5403738 YP_001392468.1 CDS CLI_3256 NC_009699.1 3432786 3434450 R identified by similarity to GB:AAB18720.1; phage structural protein complement(3432786..3434450) Clostridium botulinum F str. Langeland 5401985 YP_001392469.1 CDS CLI_3257 NC_009699.1 3434457 3435380 R identified by similarity to GB:BAD74827.1; hypothetical protein complement(3434457..3435380) Clostridium botulinum F str. Langeland 5402422 YP_001392470.1 CDS CLI_3258 NC_009699.1 3435528 3436397 R phage tail protein complement(3435528..3436397) Clostridium botulinum F str. Langeland 5404957 YP_001392471.1 CDS CLI_3259 NC_009699.1 3436414 3441894 R identified by match to protein family HMM TIGR01760; TP901 family phage tail tape measure protein complement(3436414..3441894) Clostridium botulinum F str. Langeland 5404711 YP_001392472.1 CDS CLI_3260 NC_009699.1 3441948 3442076 R identified by Glimmer3; hypothetical protein complement(3441948..3442076) Clostridium botulinum F str. Langeland 5405453 YP_001392473.1 CDS CLI_3261 NC_009699.1 3442163 3442450 R identified by similarity to GB:AAU40458.1; hypothetical protein complement(3442163..3442450) Clostridium botulinum F str. Langeland 5405019 YP_001392474.1 CDS CLI_3262 NC_009699.1 3442486 3443067 R identified by match to protein family HMM TIGR01603; phi13 family phage major tail protein complement(3442486..3443067) Clostridium botulinum F str. Langeland 5402521 YP_001392475.1 CDS CLI_3263 NC_009699.1 3443067 3443414 R identified by similarity to GB:AAU40455.1; hypothetical protein complement(3443067..3443414) Clostridium botulinum F str. Langeland 5405088 YP_001392476.1 CDS CLI_3264 NC_009699.1 3443411 3443794 R identified by match to protein family HMM PF07772; match to protein family HMM TIGR01725; HK97 family phage protein complement(3443411..3443794) Clostridium botulinum F str. Langeland 5404625 YP_001392477.1 CDS CLI_3265 NC_009699.1 3443787 3444113 R identified by match to protein family HMM PF06264; match to protein family HMM TIGR01563; phage head-tail adaptor complement(3443787..3444113) Clostridium botulinum F str. Langeland 5403881 YP_001392478.1 CDS CLI_3266 NC_009699.1 3444094 3444423 R identified by match to protein family HMM PF05135; match to protein family HMM TIGR01560; QlrG family phage protein complement(3444094..3444423) Clostridium botulinum F str. Langeland 5405366 YP_001392479.1 CDS CLI_3267 NC_009699.1 3444440 3444595 R identified by similarity to SP:P38527; hypothetical protein complement(3444440..3444595) Clostridium botulinum F str. Langeland 5404426 YP_001392480.1 CDS CLI_3268 NC_009699.1 3444615 3445742 R phage capsid protein complement(3444615..3445742) Clostridium botulinum F str. Langeland 5404240 YP_001392481.1 CDS CLI_3269 NC_009699.1 3445735 3446535 R identified by match to protein family HMM PF00574; Clp protease complement(3445735..3446535) Clostridium botulinum F str. Langeland 5402345 YP_001392482.1 CDS CLI_3270 NC_009699.1 3446571 3447764 R identified by match to protein family HMM PF04860; match to protein family HMM TIGR01537; HK97 family phage portal protein complement(3446571..3447764) Clostridium botulinum F str. Langeland 5401920 YP_001392483.1 CDS CLI_3271 NC_009699.1 3447780 3449477 R identified by match to protein family HMM PF03354; phage terminase, large subunit complement(3447780..3449477) Clostridium botulinum F str. Langeland 5402993 YP_001392484.1 CDS CLI_3272 NC_009699.1 3449474 3449947 R identified by match to protein family HMM PF05119; match to protein family HMM TIGR01558; P27 family phage terminase small subunit complement(3449474..3449947) Clostridium botulinum F str. Langeland 5405212 YP_001392485.1 CDS CLI_3273 NC_009699.1 3450205 3450678 R identified by similarity to GB:ABG87918.1; hypothetical protein complement(3450205..3450678) Clostridium botulinum F str. Langeland 5404257 YP_001392486.1 CDS CLI_3274 NC_009699.1 3450678 3450971 R hypothetical protein complement(3450678..3450971) Clostridium botulinum F str. Langeland 5402107 YP_001392487.1 CDS CLI_3275 NC_009699.1 3451005 3451346 R identified by Glimmer3; hypothetical protein complement(3451005..3451346) Clostridium botulinum F str. Langeland 5404634 YP_001392488.1 CDS CLI_3276 NC_009699.1 3451384 3451659 R identified by similarity to GB:ABG87933.1; hypothetical protein complement(3451384..3451659) Clostridium botulinum F str. Langeland 5405113 YP_001392489.1 CDS CLI_3277 NC_009699.1 3451813 3452358 R identified by match to protein family HMM PF00589; phage integrase family site specific recombinase complement(3451813..3452358) Clostridium botulinum F str. Langeland 5405395 YP_001392490.1 CDS CLI_3278 NC_009699.1 3452360 3452593 R identified by similarity to GB:AAK79876.1; hypothetical protein complement(3452360..3452593) Clostridium botulinum F str. Langeland 5401959 YP_001392491.1 CDS CLI_3279 NC_009699.1 3452802 3453188 R identified by Glimmer3; hypothetical protein complement(3452802..3453188) Clostridium botulinum F str. Langeland 5404214 YP_001392492.1 CDS CLI_3280 NC_009699.1 3453178 3453345 R identified by Glimmer3; hypothetical protein complement(3453178..3453345) Clostridium botulinum F str. Langeland 5401936 YP_001392493.1 CDS CLI_3281 NC_009699.1 3453348 3453491 R identified by Glimmer3; hypothetical protein complement(3453348..3453491) Clostridium botulinum F str. Langeland 5405147 YP_001392494.1 CDS CLI_3282 NC_009699.1 3453506 3453664 R identified by Glimmer3; hypothetical protein complement(3453506..3453664) Clostridium botulinum F str. Langeland 5402828 YP_001392495.1 CDS CLI_3283 NC_009699.1 3453755 3454804 R identified by similarity to GB:AAO34980.1; hypothetical protein complement(3453755..3454804) Clostridium botulinum F str. Langeland 5404750 YP_001392496.1 CDS CLI_3284 NC_009699.1 3454843 3454989 R identified by Glimmer3; hypothetical protein complement(3454843..3454989) Clostridium botulinum F str. Langeland 5404854 YP_001392497.1 CDS CLI_3285 NC_009699.1 3455023 3455193 R identified by Glimmer3; hypothetical protein complement(3455023..3455193) Clostridium botulinum F str. Langeland 5403852 YP_001392498.1 CDS CLI_3286 NC_009699.1 3455226 3455411 R identified by Glimmer3; hypothetical protein complement(3455226..3455411) Clostridium botulinum F str. Langeland 5403584 YP_001392499.1 CDS CLI_3287 NC_009699.1 3455449 3455721 R identified by similarity to RF:XP_675694.1; hypothetical protein complement(3455449..3455721) Clostridium botulinum F str. Langeland 5404105 YP_001392500.1 CDS CLI_3288 NC_009699.1 3455755 3455976 R identified by Glimmer3; hypothetical protein complement(3455755..3455976) Clostridium botulinum F str. Langeland 5401988 YP_001392501.1 CDS CLI_3289 NC_009699.1 3456012 3456374 R identified by Glimmer3; hypothetical protein complement(3456012..3456374) Clostridium botulinum F str. Langeland 5404371 YP_001392502.1 CDS CLI_3290 NC_009699.1 3456407 3457423 R identified by similarity to GB:CAD47030.1; hypothetical protein complement(3456407..3457423) Clostridium botulinum F str. Langeland 5404988 YP_001392503.1 CDS CLI_3291 NC_009699.1 3457452 3457910 R identified by similarity to GB:AAO81857.1; hypothetical protein complement(3457452..3457910) Clostridium botulinum F str. Langeland 5404305 YP_001392504.1 CDS CLI_3292 NC_009699.1 3457956 3458699 R identified by Glimmer3; hypothetical protein complement(3457956..3458699) Clostridium botulinum F str. Langeland 5404230 YP_001392505.1 CDS CLI_3293 NC_009699.1 3458736 3459023 R identified by similarity to GB:AAM25375.1; hypothetical protein complement(3458736..3459023) Clostridium botulinum F str. Langeland 5403027 YP_001392506.1 CDS CLI_3294 NC_009699.1 3459014 3459529 R identified by Glimmer3; hypothetical protein complement(3459014..3459529) Clostridium botulinum F str. Langeland 5404408 YP_001392507.1 CDS CLI_3295 NC_009699.1 3459532 3460074 R identified by Glimmer3; hypothetical protein complement(3459532..3460074) Clostridium botulinum F str. Langeland 5403899 YP_001392508.1 CDS CLI_3296 NC_009699.1 3460075 3460911 R identified by match to protein family HMM TIGR01714; hypothetical protein complement(3460075..3460911) Clostridium botulinum F str. Langeland 5403866 YP_001392509.1 CDS CLI_3297 NC_009699.1 3461021 3461242 R identified by similarity to GB:AAL96799.1; hypothetical protein complement(3461021..3461242) Clostridium botulinum F str. Langeland 5401966 YP_001392510.1 CDS CLI_3298 NC_009699.1 3461258 3461440 R identified by similarity to GB:ABK61203.1; hypothetical protein complement(3461258..3461440) Clostridium botulinum F str. Langeland 5402860 YP_001392511.1 CDS CLI_3299 NC_009699.1 3461504 3461710 D identified by similarity to GB:AAY35173.1; hypothetical protein 3461504..3461710 Clostridium botulinum F str. Langeland 5403565 YP_001392512.1 CDS CLI_3300 NC_009699.1 3461754 3462008 R identified by Glimmer3; hypothetical protein complement(3461754..3462008) Clostridium botulinum F str. Langeland 5403022 YP_001392513.1 CDS CLI_3301 NC_009699.1 3462020 3462778 R identified by similarity to RF:YP_459996.1; hypothetical protein complement(3462020..3462778) Clostridium botulinum F str. Langeland 5405491 YP_001392514.1 CDS CLI_3302 NC_009699.1 3462835 3462978 R identified by Glimmer3; hypothetical protein complement(3462835..3462978) Clostridium botulinum F str. Langeland 5404137 YP_001392515.1 CDS CLI_3303 NC_009699.1 3462981 3463130 R identified by Glimmer3; hypothetical protein complement(3462981..3463130) Clostridium botulinum F str. Langeland 5404708 YP_001392516.1 CDS CLI_3304 NC_009699.1 3463111 3463344 R identified by match to protein family HMM PF01381; DNA-binding protein complement(3463111..3463344) Clostridium botulinum F str. Langeland 5403629 YP_001392517.1 CDS CLI_3306 NC_009699.1 3463554 3463919 D identified by similarity to SP:P96631; match to protein family HMM PF01381; transcriptional regulator 3463554..3463919 Clostridium botulinum F str. Langeland 5404666 YP_001392518.1 CDS CLI_3305 NC_009699.1 3463916 3464035 R identified by Glimmer3; hypothetical protein complement(3463916..3464035) Clostridium botulinum F str. Langeland 5401888 YP_001392519.1 CDS CLI_3307 NC_009699.1 3464125 3465762 D identified by match to protein family HMM PF00239; match to protein family HMM PF07508; resolvase family protein 3464125..3465762 Clostridium botulinum F str. Langeland 5404497 YP_001392520.1 CDS CLI_3308 NC_009699.1 3465783 3466598 D ABC transporter substrate-binding protein 3465783..3466598 Clostridium botulinum F str. Langeland 5404485 YP_001392521.1 CDS CLI_3309 NC_009699.1 3466945 3471237 R identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241; CoA-substrate-specific enzyme activase complement(3466945..3471237) Clostridium botulinum F str. Langeland 5404692 YP_001392522.1 CDS CLI_3310 NC_009699.1 3471559 3472320 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 3471559..3472320 Clostridium botulinum F str. Langeland 5402655 YP_001392523.1 CDS CLI_3311 NC_009699.1 3472317 3473120 D identified by match to protein family HMM PF00528; ABC transporter permease 3472317..3473120 Clostridium botulinum F str. Langeland 5402245 YP_001392524.1 CDS CLI_3312 NC_009699.1 3473264 3473611 D identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07720; hypothetical protein 3473264..3473611 Clostridium botulinum F str. Langeland 5402592 YP_001392525.1 CDS CLI_3313 NC_009699.1 3473734 3474909 R identified by match to protein family HMM PF01841; transglutaminase domain-containing protein complement(3473734..3474909) Clostridium botulinum F str. Langeland 5405023 YP_001392526.1 CDS recX NC_009699.1 3474934 3475869 R binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX complement(3474934..3475869) Clostridium botulinum F str. Langeland 5403416 YP_001392527.1 CDS CLI_3315 NC_009699.1 3475891 3477120 R identified by match to protein family HMM PF00675; match to protein family HMM PF05193; M16 family peptidase complement(3475891..3477120) Clostridium botulinum F str. Langeland 5402767 YP_001392528.1 CDS CLI_3316 NC_009699.1 3477341 3477844 D identified by match to protein family HMM PF06177; hypothetical protein 3477341..3477844 Clostridium botulinum F str. Langeland 5404115 YP_001392529.1 CDS CLI_3317 NC_009699.1 3477882 3478469 D identified by match to protein family HMM PF01613; flavin reductase 3477882..3478469 Clostridium botulinum F str. Langeland 5403855 YP_001392530.1 CDS CLI_3318 NC_009699.1 3478527 3479222 D identified by match to protein family HMM PF01471; match to protein family HMM PF03734; ErfK/YbiS/YcfS/YnhG family protein 3478527..3479222 Clostridium botulinum F str. Langeland 5405564 YP_001392531.1 CDS CLI_3319 NC_009699.1 3479257 3480132 R hypothetical protein complement(3479257..3480132) Clostridium botulinum F str. Langeland 5405645 YP_001392532.1 CDS CLI_3320 NC_009699.1 3480174 3480452 R identified by match to protein family HMM PF06865; hypothetical protein complement(3480174..3480452) Clostridium botulinum F str. Langeland 5401875 YP_001392533.1 CDS proC NC_009699.1 3480580 3481386 R catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase complement(3480580..3481386) Clostridium botulinum F str. Langeland 5404886 YP_001392534.1 CDS CLI_3322 NC_009699.1 3481498 3483861 R identified by match to protein family HMM PF01228; match to protein family HMM PF02901; formate acetyltransferase complement(3481498..3483861) Clostridium botulinum F str. Langeland 5403183 YP_001392535.1 CDS CLI_3323 NC_009699.1 3483868 3484770 R identified by match to protein family HMM PF00037; match to protein family HMM PF04055; match to protein family HMM TIGR02494; glycyl-radical enzyme activating family protein complement(3483868..3484770) Clostridium botulinum F str. Langeland 5403362 YP_001392536.1 CDS CLI_3324 NC_009699.1 3484820 3485389 R identified by match to protein family HMM PF01381; match to protein family HMM PF07883; DNA-binding protein complement(3484820..3485389) Clostridium botulinum F str. Langeland 5404475 YP_001392537.1 CDS CLI_3325 NC_009699.1 3486028 3486756 R identified by match to protein family HMM PF00533; hypothetical protein complement(3486028..3486756) Clostridium botulinum F str. Langeland 5403095 YP_001392538.1 CDS CLI_3326 NC_009699.1 3486793 3487134 R identified by Glimmer3; hypothetical protein complement(3486793..3487134) Clostridium botulinum F str. Langeland 5404794 YP_001392539.1 CDS CLI_3327 NC_009699.1 3487146 3488882 R identified by match to protein family HMM PF00092; von Willebrand factor A complement(3487146..3488882) Clostridium botulinum F str. Langeland 5404543 YP_001392540.1 CDS CLI_3328 NC_009699.1 3488905 3490233 R identified by match to protein family HMM PF07728; ATPase AAA complement(3488905..3490233) Clostridium botulinum F str. Langeland 5404301 YP_001392541.1 CDS CLI_3329 NC_009699.1 3490905 3491981 D hypothetical protein 3490905..3491981 Clostridium botulinum F str. Langeland 5401986 YP_001392542.1 CDS CLI_3330 NC_009699.1 3492050 3493135 D hypothetical protein 3492050..3493135 Clostridium botulinum F str. Langeland 5402727 YP_001392543.1 CDS CLI_3331 NC_009699.1 3493314 3493514 R identified by match to protein family HMM PF00037; (Fe-S)-binding protein complement(3493314..3493514) Clostridium botulinum F str. Langeland 5402989 YP_001392544.1 CDS CLI_3332 NC_009699.1 3493751 3494644 D hypothetical protein 3493751..3494644 Clostridium botulinum F str. Langeland 5404124 YP_001392545.1 CDS CLI_3333 NC_009699.1 3494647 3495744 D R-2-hydroxyglutaryl-CoA dehydratase subunit 3494647..3495744 Clostridium botulinum F str. Langeland 5402195 YP_001392546.1 CDS CLI_3334 NC_009699.1 3495725 3496699 D identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241; CoA-substrate-specific enzyme activase 3495725..3496699 Clostridium botulinum F str. Langeland 5405397 YP_001392547.1 CDS CLI_3335 NC_009699.1 3496765 3498393 R identified by match to protein family HMM PF00158; match to protein family HMM PF02954; sigma-54 dependent transcriptional regulator complement(3496765..3498393) Clostridium botulinum F str. Langeland 5402109 YP_001392548.1 CDS CLI_3336 NC_009699.1 3498752 3499759 R identified by match to protein family HMM PF00766; match to protein family HMM PF01012; electron transfer flavoprotein subunit alpha/FixB family protein complement(3498752..3499759) Clostridium botulinum F str. Langeland 5404068 YP_001392549.1 CDS CLI_3337 NC_009699.1 3499772 3500551 R identified by match to protein family HMM PF01012; electron transfer flavoprotein subunit beta/FixA family protein complement(3499772..3500551) Clostridium botulinum F str. Langeland 5404683 YP_001392550.1 CDS bcd NC_009699.1 3500564 3501703 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; butyryl-CoA dehydrogenase complement(3500564..3501703) Clostridium botulinum F str. Langeland 5402749 YP_001392551.1 CDS CLI_3339 NC_009699.1 3501897 3503075 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis; acetyl-CoA acetyltransferase complement(3501897..3503075) Clostridium botulinum F str. Langeland 5402460 YP_001392552.1 CDS hbd NC_009699.1 3503100 3503930 R identified by match to protein family HMM PF00725; match to protein family HMM PF02737; 3-hydroxybutyryl-CoA dehydrogenase complement(3503100..3503930) Clostridium botulinum F str. Langeland 5403802 YP_001392553.1 CDS CLI_3341 NC_009699.1 3503950 3504732 R identified by match to protein family HMM PF00378; 3-hydroxybutyryl-CoA dehydratase complement(3503950..3504732) Clostridium botulinum F str. Langeland 5403333 YP_001392554.1 CDS CLI_3342 NC_009699.1 3505148 3505366 R identified by Glimmer3; hypothetical protein complement(3505148..3505366) Clostridium botulinum F str. Langeland 5402884 YP_001392555.1 CDS CLI_3343 NC_009699.1 3505410 3506507 R identified by match to protein family HMM PF01541; GIY-YIG domain-containing protein complement(3505410..3506507) Clostridium botulinum F str. Langeland 5404382 YP_001392556.1 CDS CLI_3344 NC_009699.1 3506783 3508075 R identified by match to protein family HMM PF00860; xanthine/uracil permease family protein complement(3506783..3508075) Clostridium botulinum F str. Langeland 5404857 YP_001392557.1 CDS CLI_3345 NC_009699.1 3508478 3509374 R identified by match to protein family HMM PF01966; match to protein family HMM TIGR00277; HDIG domain-containing protein complement(3508478..3509374) Clostridium botulinum F str. Langeland 5402798 YP_001392558.1 CDS CLI_3346 NC_009699.1 3509442 3509594 R identified by Glimmer3; hypothetical protein complement(3509442..3509594) Clostridium botulinum F str. Langeland 5403989 YP_001392559.1 CDS lgt NC_009699.1 3509982 3510746 R transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase complement(3509982..3510746) Clostridium botulinum F str. Langeland 5402329 YP_001392560.1 CDS CLI_3348 NC_009699.1 3510955 3511419 R identified by match to protein family HMM PF00149; match to protein family HMM TIGR00040; phosphodiesterase complement(3510955..3511419) Clostridium botulinum F str. Langeland 5404989 YP_001392561.1 CDS CLI_3349 NC_009699.1 3511462 3511827 R hypothetical protein complement(3511462..3511827) Clostridium botulinum F str. Langeland 5405639 YP_001392562.1 CDS CLI_3350 NC_009699.1 3511958 3512707 D identified by match to protein family HMM PF03009; glycerophosphoryl diester phosphodiesterase 3511958..3512707 Clostridium botulinum F str. Langeland 5404573 YP_001392563.1 CDS CLI_3351 NC_009699.1 3513041 3515047 R identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF02743; methyl-accepting chemotaxis protein complement(3513041..3515047) Clostridium botulinum F str. Langeland 5402217 YP_001392564.1 CDS CLI_3352 NC_009699.1 3515243 3515788 R identified by match to protein family HMM PF00301; match to protein family HMM PF02915; rubredoxin/rubrerythrin complement(3515243..3515788) Clostridium botulinum F str. Langeland 5402313 YP_001392565.1 CDS pflA NC_009699.1 3516430 3517128 R identified by match to protein family HMM PF04055; match to protein family HMM TIGR02493; pyruvate formate-lyase activating enzyme complement(3516430..3517128) Clostridium botulinum F str. Langeland 5403413 YP_001392566.1 CDS pfl NC_009699.1 3517308 3519536 R identified by match to protein family HMM PF01228; match to protein family HMM PF02901; match to protein family HMM TIGR01255; formate acetyltransferase 1 complement(3517308..3519536) Clostridium botulinum F str. Langeland 5403593 YP_001392567.1 CDS CLI_3355 NC_009699.1 3520048 3520299 R hypothetical protein complement(3520048..3520299) Clostridium botulinum F str. Langeland 5403033 YP_001392568.1 CDS CLI_3356 NC_009699.1 3520727 3521296 R identified by match to protein family HMM TIGR00731; ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 complement(3520727..3521296) Clostridium botulinum F str. Langeland 5401938 YP_001392569.1 CDS CLI_3357 NC_009699.1 3521463 3522077 R lipoprotein complement(3521463..3522077) Clostridium botulinum F str. Langeland 5402664 YP_001392570.1 CDS CLI_3358 NC_009699.1 3522303 3522731 D identified by match to protein family HMM PF01475; FUR family transcriptional regulator 3522303..3522731 Clostridium botulinum F str. Langeland 5403863 YP_001392571.1 CDS CLI_3359 NC_009699.1 3522800 3524035 R identified by match to protein family HMM PF01547; extracellular solute-binding protein complement(3522800..3524035) Clostridium botulinum F str. Langeland 5405008 YP_001392572.1 CDS CLI_3360 NC_009699.1 3524136 3525071 D hypothetical protein 3524136..3525071 Clostridium botulinum F str. Langeland 5402518 YP_001392573.1 CDS CLI_3361 NC_009699.1 3525231 3526187 R identified by match to protein family HMM PF08279; hypothetical protein complement(3525231..3526187) Clostridium botulinum F str. Langeland 5405180 YP_001392574.1 CDS CLI_3362 NC_009699.1 3526402 3526821 R hypothetical protein complement(3526402..3526821) Clostridium botulinum F str. Langeland 5405603 YP_001392575.1 CDS CLI_3363 NC_009699.1 3526876 3527121 R identified by Glimmer3; hypothetical protein complement(3526876..3527121) Clostridium botulinum F str. Langeland 5404874 YP_001392576.1 CDS CLI_3364 NC_009699.1 3527173 3527607 R identified by Glimmer3; hypothetical protein complement(3527173..3527607) Clostridium botulinum F str. Langeland 5404160 YP_001392577.1 CDS CLI_3365 NC_009699.1 3528007 3528732 R identified by match to protein family HMM PF02517; CAAX amino terminal protease family protein complement(3528007..3528732) Clostridium botulinum F str. Langeland 5403325 YP_001392578.1 CDS engB NC_009699.1 3528756 3529340 R binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC complement(3528756..3529340) Clostridium botulinum F str. Langeland 5405343 YP_001392579.1 CDS lon NC_009699.1 3529355 3531676 R identified by match to protein family HMM PF00004; match to protein family HMM PF02190; match to protein family HMM PF05362; match to protein family HMM PF07728; match to protein family HMM TIGR00763; ATP-dependent protease La complement(3529355..3531676) Clostridium botulinum F str. Langeland 5403198 YP_001392580.1 CDS lonB NC_009699.1 3531814 3533493 R identified by match to protein family HMM PF00004; match to protein family HMM PF01078; match to protein family HMM PF05362; match to protein family HMM PF07728; match to protein family HMM TIGR02902; ATP-dependent protease LonB complement(3531814..3533493) Clostridium botulinum F str. Langeland 5404584 YP_001392581.1 CDS clpX NC_009699.1 3533621 3534910 R binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX complement(3533621..3534910) Clostridium botulinum F str. Langeland 5405362 YP_001392582.1 CDS clpP NC_009699.1 3534930 3535514 R hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit complement(3534930..3535514) Clostridium botulinum F str. Langeland 5403440 YP_001392583.1 CDS tig NC_009699.1 3535640 3536932 R Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor complement(3535640..3536932) Clostridium botulinum F str. Langeland 5404222 YP_001392584.1 CDS CLI_3372 NC_009699.1 3537110 3537895 R identified by match to protein family HMM PF01261; AP endonuclease complement(3537110..3537895) Clostridium botulinum F str. Langeland 5403649 YP_001392585.1 CDS CLI_3373 NC_009699.1 3538002 3538814 R hypothetical protein complement(3538002..3538814) Clostridium botulinum F str. Langeland 5403063 YP_001392586.1 CDS pyrE NC_009699.1 3539028 3539603 R involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase complement(3539028..3539603) Clostridium botulinum F str. Langeland 5405308 YP_001392587.1 CDS pyrD NC_009699.1 3539637 3540533 R catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway, using a flavin nucleotide as an essential cofactor; subclass 1B is a heterotetramer consisting of two PyrDB subunits, similar to the PyrDA subunits and two PyrK subunits; dihydroorotate dehydrogenase 1B complement(3539637..3540533) Clostridium botulinum F str. Langeland 5401923 YP_001392588.1 CDS pyrK NC_009699.1 3540533 3541288 R responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the pyrD subunit to the ultimate electron acceptor NAD(+); dihydroorotate dehydrogenase electron transfer subunit complement(3540533..3541288) Clostridium botulinum F str. Langeland 5405337 YP_001392589.1 CDS pyrF NC_009699.1 3541421 3542272 R type 2 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase complement(3541421..3542272) Clostridium botulinum F str. Langeland 5402564 YP_001392590.1 CDS pyrC NC_009699.1 3542296 3543486 R identified by match to protein family HMM PF01979; match to protein family HMM TIGR00857; dihydroorotase, multifunctional complex type complement(3542296..3543486) Clostridium botulinum F str. Langeland 5403089 YP_001392591.1 CDS pyrI NC_009699.1 3543508 3543948 R involved in the allosteric regulation of aspartate carbamoyltransferase; aspartate carbamoyltransferase complement(3543508..3543948) Clostridium botulinum F str. Langeland 5402823 YP_001392592.1 CDS pyrB NC_009699.1 3543950 3544873 R catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase complement(3543950..3544873) Clostridium botulinum F str. Langeland 5403070 YP_001392593.1 CDS CLI_3381 NC_009699.1 3545128 3545886 R identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241; CoA-substrate-specific enzyme activase complement(3545128..3545886) Clostridium botulinum F str. Langeland 5405598 YP_001392594.1 CDS CLI_3382 NC_009699.1 3545909 3546106 R hypothetical protein complement(3545909..3546106) Clostridium botulinum F str. Langeland 5403297 YP_001392595.1 CDS CLI_3383 NC_009699.1 3546466 3547725 R identified by match to protein family HMM PF06050; R-2-hydroxyglutaryl-CoA dehydratase subunit complement(3546466..3547725) Clostridium botulinum F str. Langeland 5402456 YP_001392596.1 CDS CLI_3384 NC_009699.1 3547854 3549002 R identified by match to protein family HMM PF06050; R-2-hydroxyglutaryl-CoA dehydratase subunit complement(3547854..3549002) Clostridium botulinum F str. Langeland 5404091 YP_001392597.1 CDS CLI_3385 NC_009699.1 3549114 3549446 R hypothetical protein complement(3549114..3549446) Clostridium botulinum F str. Langeland 5402451 YP_001392598.1 CDS CLI_3386 NC_009699.1 3549613 3550371 R identified by match to protein family HMM PF00005; ABC-type nitrate/sulfonate/taurine/bicarbonate transport system ATPase component-like protein complement(3549613..3550371) Clostridium botulinum F str. Langeland 5404448 YP_001392599.1 CDS CLI_3389 NC_009699.1 3551138 3551674 R identified by Glimmer3; hypothetical protein complement(3551138..3551674) Clostridium botulinum F str. Langeland 5403187 YP_001392600.1 CDS CLI_3390 NC_009699.1 3551726 3551944 R identified by Glimmer3; hypothetical protein complement(3551726..3551944) Clostridium botulinum F str. Langeland 5402283 YP_001392601.1 CDS CLI_3391 NC_009699.1 3552100 3552666 R hypothetical protein complement(3552100..3552666) Clostridium botulinum F str. Langeland 5403245 YP_001392602.1 CDS CLI_3392 NC_009699.1 3552694 3553794 R lipoprotein complement(3552694..3553794) Clostridium botulinum F str. Langeland 5405258 YP_001392603.1 CDS CLI_3393 NC_009699.1 3553812 3554276 R lipoprotein complement(3553812..3554276) Clostridium botulinum F str. Langeland 5404143 YP_001392604.1 CDS CLI_3394 NC_009699.1 3554292 3555383 R identified by match to protein family HMM PF03773; permease complement(3554292..3555383) Clostridium botulinum F str. Langeland 5403844 YP_001392605.1 CDS CLI_3395 NC_009699.1 3555383 3555643 R identified by Glimmer3; hypothetical protein complement(3555383..3555643) Clostridium botulinum F str. Langeland 5405278 YP_001392606.1 CDS CLI_3431 NC_009699.1 3558201 3558671 R identified by match to protein family HMM PF00149; match to protein family HMM TIGR00040; phosphodiesterase complement(3558201..3558671) Clostridium botulinum F str. Langeland 5402758 YP_001392607.1 CDS CLI_3432 NC_009699.1 3558688 3559287 R HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; deoxyribonucleotide triphosphate pyrophosphatase complement(3558688..3559287) Clostridium botulinum F str. Langeland 5403262 YP_001392608.1 CDS CLI_3433 NC_009699.1 3559391 3560764 D hypothetical protein 3559391..3560764 Clostridium botulinum F str. Langeland 5402702 YP_001392609.1 CDS CLI_3434 NC_009699.1 3560877 3561032 D identified by similarity to GB:AAM23887.1; hypothetical protein 3560877..3561032 Clostridium botulinum F str. Langeland 5402513 YP_001392610.1 CDS CLI_3435 NC_009699.1 3561035 3562597 R identified by match to protein family HMM PF00496; solute-binding family 5 protein complement(3561035..3562597) Clostridium botulinum F str. Langeland 5403136 YP_001392611.1 CDS gatB NC_009699.1 3562752 3564182 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B complement(3562752..3564182) Clostridium botulinum F str. Langeland 5404576 YP_001392612.1 CDS gatA NC_009699.1 3564218 3565675 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A complement(3564218..3565675) Clostridium botulinum F str. Langeland 5405097 YP_001392613.1 CDS gatC NC_009699.1 3565712 3565999 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C complement(3565712..3565999) Clostridium botulinum F str. Langeland 5401982 YP_001392614.1 CDS CLI_3439 NC_009699.1 3566134 3567345 R identified by match to protein family HMM PF00375; sodium:dicarboxylate symporter family protein complement(3566134..3567345) Clostridium botulinum F str. Langeland 5402608 YP_001392615.1 CDS CLI_3440 NC_009699.1 3567728 3567997 R hypothetical protein complement(3567728..3567997) Clostridium botulinum F str. Langeland 5405615 YP_001392616.1 CDS ligA NC_009699.1 3568098 3570092 R this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA complement(3568098..3570092) Clostridium botulinum F str. Langeland 5403733 YP_001392617.1 CDS pcrA NC_009699.1 3570104 3572320 R identified by match to protein family HMM PF00580; match to protein family HMM TIGR01073; ATP-dependent DNA helicase PcrA complement(3570104..3572320) Clostridium botulinum F str. Langeland 5405391 YP_001392618.1 CDS CLI_3443 NC_009699.1 3572447 3572746 R identified by match to protein family HMM PF01371; match to protein family HMM TIGR02531; TrpR family protein complement(3572447..3572746) Clostridium botulinum F str. Langeland 5402326 YP_001392619.1 CDS CLI_3444 NC_009699.1 3573044 3573760 R identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; RNA pseudouridine synthase family protein complement(3573044..3573760) Clostridium botulinum F str. Langeland 5404194 YP_001392620.1 CDS CLI_3445 NC_009699.1 3573844 3574539 R identified by match to protein family HMM PF01464; Slt family transglycosylase complement(3573844..3574539) Clostridium botulinum F str. Langeland 5404416 YP_001392621.1 CDS CLI_3446 NC_009699.1 3574574 3576577 R identified by match to protein family HMM PF07495; triple tyrosine motif-containing protein complement(3574574..3576577) Clostridium botulinum F str. Langeland 5402163 YP_001392622.1 CDS CLI_3447 NC_009699.1 3576711 3576878 D identified by Glimmer3; hypothetical protein 3576711..3576878 Clostridium botulinum F str. Langeland 5402589 YP_001392623.1 CDS CLI_3448 NC_009699.1 3577042 3577476 R identified by match to protein family HMM PF02639; hypothetical protein complement(3577042..3577476) Clostridium botulinum F str. Langeland 5403654 YP_001392624.1 CDS pgi NC_009699.1 3577487 3578839 R functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase complement(3577487..3578839) Clostridium botulinum F str. Langeland 5405256 YP_001392625.1 CDS CLI_3450 NC_009699.1 3578923 3579093 R hypothetical protein complement(3578923..3579093) Clostridium botulinum F str. Langeland 5403356 YP_001392626.1 CDS CLI_3451 NC_009699.1 3579424 3580068 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(3579424..3580068) Clostridium botulinum F str. Langeland 5402481 YP_001392627.1 CDS CLI_3452 NC_009699.1 3580299 3580832 D identified by match to protein family HMM PF00583; acetyltransferase 3580299..3580832 Clostridium botulinum F str. Langeland 5404981 YP_001392628.1 CDS ldhA-1 NC_009699.1 3581376 3582380 D identified by match to protein family HMM PF00389; match to protein family HMM PF02826; D-lactate dehydrogenase 3581376..3582380 Clostridium botulinum F str. Langeland 5405401 YP_001392629.1 CDS ldhA-2 NC_009699.1 3582572 3583567 R identified by match to protein family HMM PF00389; match to protein family HMM PF02826; D-lactate dehydrogenase complement(3582572..3583567) Clostridium botulinum F str. Langeland 5402355 YP_001392630.1 CDS CLI_3455 NC_009699.1 3584381 3585559 R hypothetical protein complement(3584381..3585559) Clostridium botulinum F str. Langeland 5405200 YP_001392631.1 CDS CLI_3456 NC_009699.1 3585775 3586971 R identified by match to protein family HMM PF00037; match to protein family HMM PF00766; match to protein family HMM PF01012; electron transfer flavoprotein subunit alpha/FixB family protein complement(3585775..3586971) Clostridium botulinum F str. Langeland 5403995 YP_001392632.1 CDS CLI_3457 NC_009699.1 3586989 3587783 R identified by match to protein family HMM PF01012; electron transfer flavoprotein subunit beta/FixA family protein complement(3586989..3587783) Clostridium botulinum F str. Langeland 5403628 YP_001392633.1 CDS CLI_3458 NC_009699.1 3587796 3588929 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase complement(3587796..3588929) Clostridium botulinum F str. Langeland 5402280 YP_001392634.1 CDS fldC NC_009699.1 3589096 3590220 R identified by match to protein family HMM PF06050; R-phenyllactate dehydratase subunit C complement(3589096..3590220) Clostridium botulinum F str. Langeland 5405356 YP_001392635.1 CDS fldB NC_009699.1 3590222 3591445 R identified by match to protein family HMM PF06050; R-phenyllactate dehydratase subunit B complement(3590222..3591445) Clostridium botulinum F str. Langeland 5402795 YP_001392636.1 CDS fldI NC_009699.1 3591450 3592244 R identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241; R-phenyllactate dehydratase activator complement(3591450..3592244) Clostridium botulinum F str. Langeland 5404450 YP_001392637.1 CDS fldA NC_009699.1 3592244 3593482 R identified by match to protein family HMM PF02515; E-cinnamoyl-CoA:R-phenyllactate CoA transferase complement(3592244..3593482) Clostridium botulinum F str. Langeland 5402068 YP_001392638.1 CDS CLI_3463 NC_009699.1 3593537 3595168 R identified by match to protein family HMM PF00501; AMP-binding protein complement(3593537..3595168) Clostridium botulinum F str. Langeland 5405513 YP_001392639.1 CDS CLI_3464 NC_009699.1 3595634 3596956 R identified by match to protein family HMM PF05525; match to protein family HMM TIGR00796; branched-chain amino acid transport system II carrier protein complement(3595634..3596956) Clostridium botulinum F str. Langeland 5404739 YP_001392640.1 CDS guaA NC_009699.1 3597415 3598947 R contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase complement(3597415..3598947) Clostridium botulinum F str. Langeland 5401918 YP_001392641.1 CDS guaB NC_009699.1 3598960 3600414 R catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase complement(3598960..3600414) Clostridium botulinum F str. Langeland 5402765 YP_001392642.1 CDS CLI_3467 NC_009699.1 3600855 3601604 D identified by match to protein family HMM PF01171; PP-loop family protein 3600855..3601604 Clostridium botulinum F str. Langeland 5404370 YP_001392643.1 CDS groEL NC_009699.1 3601683 3603308 R 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL complement(3601683..3603308) Clostridium botulinum F str. Langeland 5403859 YP_001392644.1 CDS groES NC_009699.1 3603338 3603625 R 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES complement(3603338..3603625) Clostridium botulinum F str. Langeland 5405053 YP_001392645.1 CDS CLI_3471 NC_009699.1 3603941 3604585 D identified by match to protein family HMM PF07314; match to protein family HMM TIGR01906; hypothetical protein 3603941..3604585 Clostridium botulinum F str. Langeland 5402902 YP_001392646.1 CDS CLI_3470 NC_009699.1 3604580 3605314 R identified by match to protein family HMM PF09335; hypothetical protein complement(3604580..3605314) Clostridium botulinum F str. Langeland 5403436 YP_001392647.1 CDS CLI_3472 NC_009699.1 3605767 3607260 R identified by match to protein family HMM PF00037; match to protein family HMM PF02906; [Fe] hydrogenase complement(3605767..3607260) Clostridium botulinum F str. Langeland 5403686 YP_001392648.1 CDS CLI_3473 NC_009699.1 3607433 3608350 R identified by match to protein family HMM PF00730; match to protein family HMM PF07934; 8-oxoguanine DNA glycosylase complement(3607433..3608350) Clostridium botulinum F str. Langeland 5405614 YP_001392649.1 CDS gltA-2 NC_009699.1 3608500 3609882 R function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain; oxidoreductase complement(3608500..3609882) Clostridium botulinum F str. Langeland 5402450 YP_001392650.1 CDS CLI_3475 NC_009699.1 3609882 3610772 R identified by match to protein family HMM PF00175; ferredoxin-NADP(+) reductase subunit alpha complement(3609882..3610772) Clostridium botulinum F str. Langeland 5404328 YP_001392651.1 CDS CLI_3476 NC_009699.1 3611003 3611635 R modulates transcription in response to the NADH/NAD(+) redox state; redox-sensing transcriptional repressor Rex complement(3611003..3611635) Clostridium botulinum F str. Langeland 5403792 YP_001392652.1 CDS CLI_3477 NC_009699.1 3611835 3613757 D identified by match to protein family HMM PF00005; drug resistance ABC transporter ATP-binding protein 3611835..3613757 Clostridium botulinum F str. Langeland 5403641 YP_001392653.1 CDS CLI_3478 NC_009699.1 3614098 3614862 R identified by match to protein family HMM PF00072; match to protein family HMM PF04397; LytTr family DNA-binding response regulator complement(3614098..3614862) Clostridium botulinum F str. Langeland 5402334 YP_001392654.1 CDS CLI_3479 NC_009699.1 3614863 3616497 R identified by match to protein family HMM PF02518; match to protein family HMM PF06580; match to protein family HMM PF07694; sensor histidine kinase complement(3614863..3616497) Clostridium botulinum F str. Langeland 5404650 YP_001392655.1 CDS cstA NC_009699.1 3616740 3618158 D identified by match to protein family HMM PF02554; carbon starvation protein CstA 3616740..3618158 Clostridium botulinum F str. Langeland 5402258 YP_001392656.1 CDS CLI_3481 NC_009699.1 3618210 3621137 R identified by match to protein family HMM PF05193; match to protein family HMM PF08367; peptidase complement(3618210..3621137) Clostridium botulinum F str. Langeland 5401999 YP_001392657.1 CDS pyc NC_009699.1 3621699 3625133 R biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate; pyruvate carboxylase complement(3621699..3625133) Clostridium botulinum F str. Langeland 5404943 YP_001392658.1 CDS CLI_3483 NC_009699.1 3625593 3626615 R in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease complement(3625593..3626615) Clostridium botulinum F str. Langeland 5402215 YP_001392659.1 CDS CLI_3484 NC_009699.1 3626839 3627462 D identified by match to protein family HMM PF05866; endodeoxyribonuclease RusA family protein 3626839..3627462 Clostridium botulinum F str. Langeland 5404585 YP_001392660.1 CDS CLI_3485 NC_009699.1 3627698 3627829 D identified by Glimmer3; hypothetical protein 3627698..3627829 Clostridium botulinum F str. Langeland 5403475 YP_001392661.1 CDS CLI_3486 NC_009699.1 3627839 3629095 R identified by match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase complement(3627839..3629095) Clostridium botulinum F str. Langeland 5402628 YP_001392662.1 CDS CLI_3489 NC_009699.1 3629607 3629993 R hypothetical protein complement(3629607..3629993) Clostridium botulinum F str. Langeland 5404629 YP_001392663.1 CDS CLI_3490 NC_009699.1 3630056 3630946 R hypothetical protein complement(3630056..3630946) Clostridium botulinum F str. Langeland 5404232 YP_001392664.1 CDS CLI_3491 NC_009699.1 3630962 3631870 R identified by match to protein family HMM PF01297; manganese/zinc/iron chelate ABC transporter substrate-binding protein complement(3630962..3631870) Clostridium botulinum F str. Langeland 5403896 YP_001392665.1 CDS CLI_3492 NC_009699.1 3632068 3633309 D identified by match to protein family HMM PF01966; match to protein family HMM TIGR00277; HDIG domain-containing protein 3632068..3633309 Clostridium botulinum F str. Langeland 5404659 YP_001392666.1 CDS CLI_3493 NC_009699.1 3633447 3633905 D identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150; hypothetical protein 3633447..3633905 Clostridium botulinum F str. Langeland 5403823 YP_001392667.1 CDS CLI_3494 NC_009699.1 3633902 3634615 D identified by match to protein family HMM PF00814; glycoprotease family protein 3633902..3634615 Clostridium botulinum F str. Langeland 5405299 YP_001392668.1 CDS rimI NC_009699.1 3634608 3635066 D identified by match to protein family HMM PF00583; match to protein family HMM TIGR01575; ribosomal-protein-alanine acetyltransferase 3634608..3635066 Clostridium botulinum F str. Langeland 5402016 YP_001392669.1 CDS tyrS-2 NC_009699.1 3635424 3636647 R catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase complement(3635424..3636647) Clostridium botulinum F str. Langeland 5403928 YP_001392670.1 CDS CLI_3497 NC_009699.1 3636880 3637287 R hypothetical protein complement(3636880..3637287) Clostridium botulinum F str. Langeland 5403613 YP_001392671.1 CDS CLI_3498 NC_009699.1 3637423 3638580 R identified by match to protein family HMM PF04326; ATP-binding protein complement(3637423..3638580) Clostridium botulinum F str. Langeland 5404027 YP_001392672.1 CDS CLI_3499 NC_009699.1 3638728 3639291 R hypothetical protein complement(3638728..3639291) Clostridium botulinum F str. Langeland 5402743 YP_001392673.1 CDS CLI_3500 NC_009699.1 3639373 3639534 R identified by Glimmer3; hypothetical protein complement(3639373..3639534) Clostridium botulinum F str. Langeland 5401877 YP_001392674.1 CDS CLI_3501 NC_009699.1 3639790 3640782 D identified by match to protein family HMM PF01569; PAP2 family protein 3639790..3640782 Clostridium botulinum F str. Langeland 5404337 YP_001392675.1 CDS prfC NC_009699.1 3640871 3642460 R identified by match to protein family HMM PF00009; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match to protein family HMM TIGR00503; peptide chain release factor 3 complement(3640871..3642460) Clostridium botulinum F str. Langeland 5404126 YP_001392676.1 CDS CLI_3503 NC_009699.1 3642965 3643771 D identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM PF08282; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; HAD family hydrolase 3642965..3643771 Clostridium botulinum F str. Langeland 5402927 YP_001392677.1 CDS trpS NC_009699.1 3643890 3644888 R catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase complement(3643890..3644888) Clostridium botulinum F str. Langeland 5402275 YP_001392678.1 CDS CLI_3505 NC_009699.1 3645067 3645204 R identified by Glimmer3; hypothetical protein complement(3645067..3645204) Clostridium botulinum F str. Langeland 5403871 YP_001392679.1 CDS CLI_3506 NC_009699.1 3645501 3645875 R identified by match to protein family HMM PF01880; match to protein family HMM PF06397; match to protein family HMM TIGR00319; match to protein family HMM TIGR00320; match to protein family HMM TIGR00332; desulfoferrodoxin complement(3645501..3645875) Clostridium botulinum F str. Langeland 5402388 YP_001392680.1 CDS CLI_3507 NC_009699.1 3646058 3646252 D hypothetical protein 3646058..3646252 Clostridium botulinum F str. Langeland 5403502 YP_001392681.1 CDS cgs NC_009699.1 3646475 3655123 R identified by match to protein family HMM PF06165; match to protein family HMM PF06204; match to protein family HMM PF06205; cyclic beta 1-2 glucan synthetase complement(3646475..3655123) Clostridium botulinum F str. Langeland 5402532 YP_001392682.1 CDS lysA NC_009699.1 3655388 3656674 R identified by match to protein family HMM PF00278; match to protein family HMM PF02784; match to protein family HMM TIGR01048; diaminopimelate decarboxylase complement(3655388..3656674) Clostridium botulinum F str. Langeland 5402924 YP_001392683.1 CDS lysC NC_009699.1 3656690 3657892 R identified by match to protein family HMM PF00696; match to protein family HMM PF01842; match to protein family HMM TIGR00657; aspartokinase complement(3656690..3657892) Clostridium botulinum F str. Langeland 5402949 YP_001392684.1 CDS CLI_3511 NC_009699.1 3658288 3659586 R catalyzes the removal of amino acids from the N termini of peptides; aminopeptidase 2 complement(3658288..3659586) Clostridium botulinum F str. Langeland 5404400 YP_001392685.1 CDS CLI_3512 NC_009699.1 3659735 3660913 D identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297; cation efflux family protein 3659735..3660913 Clostridium botulinum F str. Langeland 5404569 YP_001392686.1 CDS CLI_3513 NC_009699.1 3661050 3662141 D hypothetical protein 3661050..3662141 Clostridium botulinum F str. Langeland 5405020 YP_001392687.1 CDS CLI_3514 NC_009699.1 3662406 3664535 R helicase complement(3662406..3664535) Clostridium botulinum F str. Langeland 5404914 YP_001392688.1 CDS ftsH-1 NC_009699.1 3664556 3666532 R identified by match to protein family HMM PF00004; match to protein family HMM PF01434; match to protein family HMM PF06480; match to protein family HMM PF07728; match to protein family HMM TIGR01241; ATP-dependent metalloprotease FtsH complement(3664556..3666532) Clostridium botulinum F str. Langeland 5404307 YP_001392689.1 CDS CLI_3516 NC_009699.1 3666949 3668340 R divalent metal ion-dependent extracellular dipeptidase; able to hydrolyze a broad range of dipeptides but no tri-, tetra-, or larger oligopeptides; differences in the amino acid specificity of the cleavage site varies between species; similar to succinyl-diaminopimelate desuccinylases; dipeptidase PepV complement(3666949..3668340) Clostridium botulinum F str. Langeland 5403307 YP_001392690.1 CDS proS NC_009699.1 3668541 3669977 R catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase complement(3668541..3669977) Clostridium botulinum F str. Langeland 5404192 YP_001392691.1 CDS CLI_3518 NC_009699.1 3670401 3670643 R identified by match to protein family HMM PF01541; GIY-YIG domain-containing protein complement(3670401..3670643) Clostridium botulinum F str. Langeland 5402370 YP_001392692.1 CDS CLI_3519 NC_009699.1 3670765 3671988 R hypothetical protein complement(3670765..3671988) Clostridium botulinum F str. Langeland 5404131 YP_001392693.1 CDS CLI_3520 NC_009699.1 3672084 3672962 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(3672084..3672962) Clostridium botulinum F str. Langeland 5405524 YP_001392694.1 CDS CLI_3521 NC_009699.1 3673120 3673926 R hypothetical protein complement(3673120..3673926) Clostridium botulinum F str. Langeland 5403688 YP_001392695.1 CDS CLI_3522 NC_009699.1 3673901 3674473 R identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF04967; match to protein family HMM PF08281; match to protein family HMM TIGR02937; sigma-70 family RNA polymerase sigma factor complement(3673901..3674473) Clostridium botulinum F str. Langeland 5405094 YP_001392696.1 CDS CLI_3523 NC_009699.1 3674858 3676516 R identified by match to protein family HMM PF00860; match to protein family HMM PF00916; match to protein family HMM PF01740; match to protein family HMM TIGR00815; SulP family sulfate permease complement(3674858..3676516) Clostridium botulinum F str. Langeland 5402519 YP_001392697.1 CDS CLI_3524 NC_009699.1 3676730 3678076 R identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase complement(3676730..3678076) Clostridium botulinum F str. Langeland 5402049 YP_001392698.1 CDS CLI_3525 NC_009699.1 3678099 3678791 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator complement(3678099..3678791) Clostridium botulinum F str. Langeland 5404155 YP_001392699.1 CDS CLI_3526 NC_009699.1 3679056 3680264 R hypothetical protein complement(3679056..3680264) Clostridium botulinum F str. Langeland 5405429 YP_001392700.1 CDS CLI_3527 NC_009699.1 3680269 3681174 R identified by match to protein family HMM PF00005; bacitracin ABC transporter ATP-binding protein complement(3680269..3681174) Clostridium botulinum F str. Langeland 5405616 YP_001392701.1 CDS CLI_3528 NC_009699.1 3681531 3681734 D hypothetical protein 3681531..3681734 Clostridium botulinum F str. Langeland 5403348 YP_001392702.1 CDS CLI_3529 NC_009699.1 3681861 3682856 R hypothetical protein complement(3681861..3682856) Clostridium botulinum F str. Langeland 5403672 YP_001392703.1 CDS CLI_3530 NC_009699.1 3683223 3684308 R identified by match to protein family HMM PF05913; hypothetical protein complement(3683223..3684308) Clostridium botulinum F str. Langeland 5403067 YP_001392704.1 CDS CLI_3531 NC_009699.1 3684616 3685509 R identified by match to protein family HMM PF01869; BadF/BadG/BcrA/BcrD ATPase family protein complement(3684616..3685509) Clostridium botulinum F str. Langeland 5404567 YP_001392705.1 CDS CLI_3532 NC_009699.1 3685569 3685865 R identified by match to protein family HMM PF02255; PTS system lactose/cellobiose-specific family IIA subunit complement(3685569..3685865) Clostridium botulinum F str. Langeland 5404544 YP_001392706.1 CDS CLI_3533 NC_009699.1 3686104 3686415 R identified by match to protein family HMM PF02302; PTS system lactose/cellobiose-specific family IIB subunit complement(3686104..3686415) Clostridium botulinum F str. Langeland 5404477 YP_001392707.1 CDS CLI_3534 NC_009699.1 3686535 3689264 R identified by match to protein family HMM PF00158; match to protein family HMM PF00874; match to protein family HMM PF03610; match to protein family HMM PF07728; sigma-54 dependent transcriptional regulator complement(3686535..3689264) Clostridium botulinum F str. Langeland 5401897 YP_001392708.1 CDS CLI_3535 NC_009699.1 3689389 3690681 R identified by match to protein family HMM PF02378; match to protein family HMM TIGR00410; PTS system lactose/cellobiose family transporter subunit IIC complement(3689389..3690681) Clostridium botulinum F str. Langeland 5402424 YP_001392709.1 CDS CLI_3536 NC_009699.1 3690763 3692100 R identified by match to protein family HMM PF02056; glycosyl hydrolase family protein complement(3690763..3692100) Clostridium botulinum F str. Langeland 5404009 YP_001392710.1 CDS CLI_3537 NC_009699.1 3692453 3693766 R identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254; diguanylate cyclase complement(3692453..3693766) Clostridium botulinum F str. Langeland 5405096 YP_001392711.1 CDS CLI_3538 NC_009699.1 3694192 3694791 D identified by match to protein family HMM PF00589; phage integrase family site specific recombinase 3694192..3694791 Clostridium botulinum F str. Langeland 5404916 YP_001392712.1 CDS speD NC_009699.1 3695102 3695452 R identified by match to protein family HMM PF02675; match to protein family HMM TIGR03330; S-adenosylmethionine decarboxylase complement(3695102..3695452) Clostridium botulinum F str. Langeland 5405519 YP_001392713.1 CDS CLI_3540 NC_009699.1 3695606 3696802 R hypothetical protein complement(3695606..3696802) Clostridium botulinum F str. Langeland 5404208 YP_001392714.1 CDS CLI_3541 NC_009699.1 3697326 3697601 R hypothetical protein complement(3697326..3697601) Clostridium botulinum F str. Langeland 5403403 YP_001392715.1 CDS CLI_3542 NC_009699.1 3698072 3698392 R identified by match to protein family HMM PF01638; transcriptional regulator complement(3698072..3698392) Clostridium botulinum F str. Langeland 5402507 YP_001392716.1 CDS CLI_3543 NC_009699.1 3698497 3699033 D identified by similarity to SP:Q9KIT1; flavoredoxin 3698497..3699033 Clostridium botulinum F str. Langeland 5403607 YP_001392717.1 CDS CLI_3544 NC_009699.1 3699235 3700089 R identified by match to protein family HMM PF05368; hypothetical protein complement(3699235..3700089) Clostridium botulinum F str. Langeland 5402900 YP_001392718.1 CDS CLI_3545 NC_009699.1 3700561 3701406 R identified by match to protein family HMM PF00248; aldo/keto reductase complement(3700561..3701406) Clostridium botulinum F str. Langeland 5404953 YP_001392719.1 CDS CLI_3546 NC_009699.1 3701430 3702056 R identified by match to protein family HMM PF02525; match to protein family HMM PF03358; NADPH-dependent FMN reductase complement(3701430..3702056) Clostridium botulinum F str. Langeland 5402951 YP_001392720.1 CDS CLI_3547 NC_009699.1 3702268 3702690 D identified by match to protein family HMM PF00376; MerR family transcriptional regulator 3702268..3702690 Clostridium botulinum F str. Langeland 5402560 YP_001392721.1 CDS CLI_3549 NC_009699.1 3703802 3704746 R identified by match to protein family HMM PF04657; hypothetical protein complement(3703802..3704746) Clostridium botulinum F str. Langeland 5402360 YP_001392722.1 CDS CLI_3550 NC_009699.1 3704991 3705392 R identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738; transcriptional regulator complement(3704991..3705392) Clostridium botulinum F str. Langeland 5402621 YP_001392723.1 CDS CLI_3551 NC_009699.1 3705624 3706031 R identified by match to protein family HMM PF00583; acetyltransferase complement(3705624..3706031) Clostridium botulinum F str. Langeland 5404820 YP_001392724.1 CDS rumA-2 NC_009699.1 3706444 3707829 R identified by match to protein family HMM PF01170; match to protein family HMM PF01938; match to protein family HMM PF02475; match to protein family HMM PF03602; match to protein family HMM PF05958; match to protein family HMM TIGR00479; 23S rRNA (uracil-5-)-methyltransferase RumA complement(3706444..3707829) Clostridium botulinum F str. Langeland 5403015 YP_001392725.1 CDS CLI_3553 NC_009699.1 3708062 3708415 R hypothetical protein complement(3708062..3708415) Clostridium botulinum F str. Langeland 5403685 YP_001392726.1 CDS CLI_3554 NC_009699.1 3708417 3708530 R identified by Glimmer3; hypothetical protein complement(3708417..3708530) Clostridium botulinum F str. Langeland 5403526 YP_001392727.1 CDS CLI_3555 NC_009699.1 3708743 3709753 R identified by match to protein family HMM PF00037; match to protein family HMM PF00248; aldo/keto reductase complement(3708743..3709753) Clostridium botulinum F str. Langeland 5404168 YP_001392728.1 CDS pykA NC_009699.1 3709897 3711654 R identified by match to protein family HMM PF00224; match to protein family HMM PF00391; match to protein family HMM PF02887; match to protein family HMM TIGR01064; pyruvate kinase complement(3709897..3711654) Clostridium botulinum F str. Langeland 5401954 YP_001392729.1 CDS pfkA NC_009699.1 3711688 3712647 R catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis; 6-phosphofructokinase complement(3711688..3712647) Clostridium botulinum F str. Langeland 5404620 YP_001392730.1 CDS dnaE NC_009699.1 3712889 3716446 R catalyzes DNA-template-directed extension of the 3'-end of a DNA strand by one nucleotide at a time. Proposed to be responsible for the synthesis of the lagging strand. In the low GC gram positive bacteria this enzyme is less processive and more error prone than its counterpart in other bacteria.; DNA polymerase III DnaE complement(3712889..3716446) Clostridium botulinum F str. Langeland 5403364 YP_001392731.1 CDS CLI_3559 NC_009699.1 3716609 3717556 R identified by match to protein family HMM PF02650; match to protein family HMM TIGR00647; hypothetical protein complement(3716609..3717556) Clostridium botulinum F str. Langeland 5402223 YP_001392732.1 CDS CLI_3560 NC_009699.1 3717563 3718900 R identified by match to protein family HMM PF01933; match to protein family HMM TIGR01826; hypothetical protein complement(3717563..3718900) Clostridium botulinum F str. Langeland 5402483 YP_001392733.1 CDS CLI_3561 NC_009699.1 3718897 3719781 R identified by match to protein family HMM PF03668; hypothetical protein complement(3718897..3719781) Clostridium botulinum F str. Langeland 5405416 YP_001392734.1 CDS murB NC_009699.1 3719901 3720821 R catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase complement(3719901..3720821) Clostridium botulinum F str. Langeland 5401849 YP_001392735.1 CDS CLI_3563 NC_009699.1 3720890 3721621 R identified by match to protein family HMM PF02811; hydrolase complement(3720890..3721621) Clostridium botulinum F str. Langeland 5403721 YP_001392736.1 CDS uvrC NC_009699.1 3721670 3723526 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C complement(3721670..3723526) Clostridium botulinum F str. Langeland 5404302 YP_001392737.1 CDS CLI_3565 NC_009699.1 3723540 3724148 R identified by match to protein family HMM PF04307; metal-dependent hydrolase, membrane-bound complement(3723540..3724148) Clostridium botulinum F str. Langeland 5404819 YP_001392738.1 CDS CLI_3566 NC_009699.1 3724335 3725231 R identified by match to protein family HMM PF01336; match to protein family HMM PF01966; HD domain-containing protein complement(3724335..3725231) Clostridium botulinum F str. Langeland 5404673 YP_001392739.1 CDS CLI_3567 NC_009699.1 3725259 3726689 R identified by match to protein family HMM PF00905; penicillin-binding protein complement(3725259..3726689) Clostridium botulinum F str. Langeland 5404159 YP_001392740.1 CDS CLI_3568 NC_009699.1 3726694 3727923 R identified by match to protein family HMM PF01098; cell cycle protein FtsW complement(3726694..3727923) Clostridium botulinum F str. Langeland 5404459 YP_001392741.1 CDS CLI_3569 NC_009699.1 3727934 3728371 R identified by match to protein family HMM PF00498; FHA domain-containing protein complement(3727934..3728371) Clostridium botulinum F str. Langeland 5403345 YP_001392742.1 CDS uvrA NC_009699.1 3728470 3731292 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A complement(3728470..3731292) Clostridium botulinum F str. Langeland 5404607 YP_001392743.1 CDS uvrB NC_009699.1 3731311 3733299 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B complement(3731311..3733299) Clostridium botulinum F str. Langeland 5403430 YP_001392744.1 CDS CLI_3572 NC_009699.1 3733301 3734596 R hypothetical protein complement(3733301..3734596) Clostridium botulinum F str. Langeland 5404954 YP_001392745.1 CDS CLI_3573 NC_009699.1 3734685 3735890 R identified by match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; carboxyl-terminal protease complement(3734685..3735890) Clostridium botulinum F str. Langeland 5405647 YP_001392746.1 CDS CLI_3574 NC_009699.1 3736100 3736990 R identified by match to protein family HMM PF02687; cell division protein FtsX complement(3736100..3736990) Clostridium botulinum F str. Langeland 5404721 YP_001392747.1 CDS CLI_3575 NC_009699.1 3736980 3737666 R identified by match to protein family HMM PF00005; match to protein family HMM TIGR02673; cell division ATP-binding protein FtsE complement(3736980..3737666) Clostridium botulinum F str. Langeland 5402783 YP_001392748.1 CDS CLI_3576 NC_009699.1 3737822 3738724 R identified by match to protein family HMM PF02588; hypothetical protein complement(3737822..3738724) Clostridium botulinum F str. Langeland 5403931 YP_001392749.1 CDS CLI_3577 NC_009699.1 3738817 3739167 R identified by Glimmer3; hypothetical protein complement(3738817..3739167) Clostridium botulinum F str. Langeland 5403574 YP_001392750.1 CDS CLI_3578 NC_009699.1 3739240 3740181 R identified by match to protein family HMM PF02779; match to protein family HMM PF02780; transketolase, C-terminal subunit complement(3739240..3740181) Clostridium botulinum F str. Langeland 5403949 YP_001392751.1 CDS CLI_3579 NC_009699.1 3740181 3741005 R identified by match to protein family HMM PF00456; transketolase complement(3740181..3741005) Clostridium botulinum F str. Langeland 5403194 YP_001392752.1 CDS CLI_3580 NC_009699.1 3741268 3741621 R identified by match to protein family HMM PF02452; PemK family protein complement(3741268..3741621) Clostridium botulinum F str. Langeland 5403968 YP_001392753.1 CDS CLI_3581 NC_009699.1 3741578 3741901 R hypothetical protein complement(3741578..3741901) Clostridium botulinum F str. Langeland 5402714 YP_001392754.1 CDS alr NC_009699.1 3742040 3743200 R converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase complement(3742040..3743200) Clostridium botulinum F str. Langeland 5404998 YP_001392755.1 CDS CLI_3583 NC_009699.1 3743228 3743842 R hypothetical protein complement(3743228..3743842) Clostridium botulinum F str. Langeland 5405551 YP_001392756.1 CDS CLI_3584 NC_009699.1 3744042 3745544 R identified by match to protein family HMM PF01256; match to protein family HMM PF03853; match to protein family HMM TIGR00196; match to protein family HMM TIGR00197; carbohydrate kinase family protein complement(3744042..3745544) Clostridium botulinum F str. Langeland 5402523 YP_001392757.1 CDS acpS NC_009699.1 3745541 3745921 R identified by match to protein family HMM PF01648; match to protein family HMM TIGR00516; match to protein family HMM TIGR00556; holo-(acyl-carrier-protein) synthase complement(3745541..3745921) Clostridium botulinum F str. Langeland 5403693 YP_001392758.1 CDS CLI_3586 NC_009699.1 3746036 3746398 R hypothetical protein complement(3746036..3746398) Clostridium botulinum F str. Langeland 5403192 YP_001392759.1 CDS CLI_3587 NC_009699.1 3746794 3748119 R identified by match to protein family HMM PF03553; Na+/H+ antiporter family protein complement(3746794..3748119) Clostridium botulinum F str. Langeland 5405469 YP_001392760.1 CDS CLI_3588 NC_009699.1 3748425 3749282 R identified by match to protein family HMM PF03631; match to protein family HMM TIGR00765; hypothetical protein complement(3748425..3749282) Clostridium botulinum F str. Langeland 5403358 YP_001392761.1 CDS CLI_3589 NC_009699.1 3749443 3750102 R hypothetical protein complement(3749443..3750102) Clostridium botulinum F str. Langeland 5403640 YP_001392762.1 CDS rpsD-1 NC_009699.1 3750317 3750910 R primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 complement(3750317..3750910) Clostridium botulinum F str. Langeland 5405167 YP_001392763.1 CDS CLI_3591 NC_009699.1 3751356 3752528 D identified by match to protein family HMM PF00375; sodium:dicarboxylate symporter family protein 3751356..3752528 Clostridium botulinum F str. Langeland 5405175 YP_001392764.1 CDS CLI_3592 NC_009699.1 3752687 3753154 D hypothetical protein 3752687..3753154 Clostridium botulinum F str. Langeland 5403818 YP_001392765.1 CDS glmS NC_009699.1 3753599 3755425 R identified by match to protein family HMM PF00310; match to protein family HMM PF01380; match to protein family HMM TIGR01135; glucosamine--fructose-6-phosphate aminotransferase complement(3753599..3755425) Clostridium botulinum F str. Langeland 5404983 YP_001392766.1 CDS CLI_3594 NC_009699.1 3756091 3756768 R identified by match to protein family HMM PF00923; transaldolase complement(3756091..3756768) Clostridium botulinum F str. Langeland 5402484 YP_001392767.1 CDS CLI_3595 NC_009699.1 3756787 3757434 R identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549; haloacid dehalogenase complement(3756787..3757434) Clostridium botulinum F str. Langeland 5403703 YP_001392768.1 CDS srlD NC_009699.1 3757458 3758243 R catalyzes the conversion of sorbitol 6-phosphate into fructose 6-phosphate; sorbitol-6-phosphate dehydrogenase complement(3757458..3758243) Clostridium botulinum F str. Langeland 5403810 YP_001392769.1 CDS CLI_3597 NC_009699.1 3758264 3758629 R identified by match to protein family HMM PF03829; PTS system glucitol/sorbitol-specific transporter subunit IIA complement(3758264..3758629) Clostridium botulinum F str. Langeland 5402236 YP_001392770.1 CDS CLI_3598 NC_009699.1 3758845 3759849 R identified by match to protein family HMM PF03612; match to protein family HMM PF07663; match to protein family HMM TIGR00825; PTS system glucitol/sorbitol-specific transporter subunit IIBC complement(3758845..3759849) Clostridium botulinum F str. Langeland 5404771 YP_001392771.1 CDS CLI_3599 NC_009699.1 3759862 3760407 R identified by match to protein family HMM PF03608; match to protein family HMM TIGR00821; PTS system glucitol/sorbitol-specific transporter subunit IIC complement(3759862..3760407) Clostridium botulinum F str. Langeland 5402052 YP_001392772.1 CDS gutM NC_009699.1 3760450 3760845 R identified by match to protein family HMM PF06923; glucitol operon activator protein complement(3760450..3760845) Clostridium botulinum F str. Langeland 5405194 YP_001392773.1 CDS CLI_3601 NC_009699.1 3760859 3761908 R identified by match to protein family HMM PF00107; match to protein family HMM PF08240; L-iditol 2-dehydrogenase complement(3760859..3761908) Clostridium botulinum F str. Langeland 5404421 YP_001392774.1 CDS CLI_3602 NC_009699.1 3761943 3762914 R identified by match to protein family HMM PF04198; glucitol operon regulator complement(3761943..3762914) Clostridium botulinum F str. Langeland 5402837 YP_001392775.1 CDS glmM NC_009699.1 3763270 3764619 R catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase complement(3763270..3764619) Clostridium botulinum F str. Langeland 5403764 YP_001392776.1 CDS CLI_3605 NC_009699.1 3766035 3767105 R catalyzes the coenzyme A-dependent oxidation of 3-methyl-2-oxobutanoate coupled to the reduction of ferredoxin producing S-(2-methylpropanoyl)-CoA; 2-ketoisovalerate ferredoxin reductase complement(3766035..3767105) Clostridium botulinum F str. Langeland 5405405 YP_001392777.1 CDS CLI_3606 NC_009699.1 3767121 3767330 R identified by match to protein family HMM PF00037; 2-oxoacid:acceptor oxidoreductase subunit delta complement(3767121..3767330) Clostridium botulinum F str. Langeland 5402154 YP_001392778.1 CDS CLI_3607 NC_009699.1 3767432 3768094 R hypothetical protein complement(3767432..3768094) Clostridium botulinum F str. Langeland 5402778 YP_001392779.1 CDS buk-1 NC_009699.1 3768357 3769427 R catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate; butyrate kinase complement(3768357..3769427) Clostridium botulinum F str. Langeland 5403530 YP_001392780.1 CDS ptb NC_009699.1 3769456 3770367 R catalyzes the synthesis of butanoylphosphate from butanoyl-CoA and inorganic phosphate; phosphate butyryltransferase complement(3769456..3770367) Clostridium botulinum F str. Langeland 5402135 YP_001392781.1 CDS buk-2 NC_009699.1 3770360 3771454 R catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate; butyrate kinase complement(3770360..3771454) Clostridium botulinum F str. Langeland 5404062 YP_001392782.1 CDS CLI_3611 NC_009699.1 3771555 3773153 R oxidoreductase, FAD-binding complement(3771555..3773153) Clostridium botulinum F str. Langeland 5404092 YP_001392783.1 CDS CLI_3612 NC_009699.1 3773155 3774435 R identified by match to protein family HMM PF07949; hypothetical protein complement(3773155..3774435) Clostridium botulinum F str. Langeland 5402536 YP_001392784.1 CDS CLI_3613 NC_009699.1 3774405 3775253 R identified by match to protein family HMM PF02457; match to protein family HMM TIGR00159; hypothetical protein complement(3774405..3775253) Clostridium botulinum F str. Langeland 5405346 YP_001392785.1 CDS CLI_3614 NC_009699.1 3775508 3776041 D identified by match to protein family HMM PF07486; cell wall hydrolase family protein 3775508..3776041 Clostridium botulinum F str. Langeland 5403865 YP_001392786.1 CDS CLI_3615 NC_009699.1 3776383 3777246 R identified by match to protein family HMM PF01134; match to protein family HMM PF07992; pyridine nucleotide-disulfide family oxidoreductase complement(3776383..3777246) Clostridium botulinum F str. Langeland 5404170 YP_001392787.1 CDS trx NC_009699.1 3777312 3777629 R identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068; thioredoxin complement(3777312..3777629) Clostridium botulinum F str. Langeland 5402322 YP_001392788.1 CDS iadA NC_009699.1 3777738 3778913 R identified by match to protein family HMM PF01979; match to protein family HMM PF07969; match to protein family HMM TIGR01975; isoaspartyl dipeptidase complement(3777738..3778913) Clostridium botulinum F str. Langeland 5401925 YP_001392789.1 CDS CLI_3618 NC_009699.1 3778988 3780241 R identified by match to protein family HMM PF00515; match to protein family HMM PF07719; hypothetical protein complement(3778988..3780241) Clostridium botulinum F str. Langeland 5404632 YP_001392790.1 CDS CLI_3619 NC_009699.1 3780269 3781009 R lipoprotein complement(3780269..3781009) Clostridium botulinum F str. Langeland 5402501 YP_001392791.1 CDS ptsI NC_009699.1 3781115 3782734 R identified by match to protein family HMM PF00391; match to protein family HMM PF02896; match to protein family HMM PF05524; match to protein family HMM TIGR01417; phosphoenolpyruvate-protein phosphotransferase complement(3781115..3782734) Clostridium botulinum F str. Langeland 5403992 YP_001392792.1 CDS CLI_3621 NC_009699.1 3783052 3785061 D identified by match to protein family HMM PF00158; match to protein family HMM PF00989; match to protein family HMM PF02954; match to protein family HMM TIGR00229; sensory box sigma-54 dependent transcriptional regulator 3783052..3785061 Clostridium botulinum F str. Langeland 5403595 YP_001392793.1 CDS CLI_3622 NC_009699.1 3785198 3785905 R identified by match to protein family HMM PF00515; hypothetical protein complement(3785198..3785905) Clostridium botulinum F str. Langeland 5403149 YP_001392794.1 CDS CLI_3623 NC_009699.1 3785975 3786529 R identified by match to protein family HMM PF05683; match to protein family HMM TIGR00723; tartrate/fumarate subfamily Fe-S type hydro-lyase subunit beta complement(3785975..3786529) Clostridium botulinum F str. Langeland 5404013 YP_001392795.1 CDS CLI_3624 NC_009699.1 3786630 3787472 R Catalyzes the reversible hydration of fumaric acid to yield I-malic acid; fumarate hydratase complement(3786630..3787472) Clostridium botulinum F str. Langeland 5404689 YP_001392796.1 CDS CLI_3625 NC_009699.1 3787613 3788317 R identified by match to protein family HMM PF01520; match to protein family HMM TIGR02883; N-acetylmuramoyl-L-alanine amidase complement(3787613..3788317) Clostridium botulinum F str. Langeland 5403632 YP_001392797.1 CDS CLI_3626 NC_009699.1 3788577 3790193 R identified by match to protein family HMM PF01895; match to protein family HMM PF02690; match to protein family HMM TIGR00704; Na/Pi-cotransporter family protein/PhoU family protein complement(3788577..3790193) Clostridium botulinum F str. Langeland 5404803 YP_001392798.1 CDS rpsI NC_009699.1 3790499 3790891 R forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 complement(3790499..3790891) Clostridium botulinum F str. Langeland 5402468 YP_001392799.1 CDS rplM NC_009699.1 3790917 3791354 R in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 complement(3790917..3791354) Clostridium botulinum F str. Langeland 5403877 YP_001392800.1 CDS truA NC_009699.1 3791475 3792215 R mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A complement(3791475..3792215) Clostridium botulinum F str. Langeland 5402439 YP_001392801.1 CDS CLI_3630 NC_009699.1 3792215 3793018 R identified by match to protein family HMM PF02361; cobalt ABC transporter permease complement(3792215..3793018) Clostridium botulinum F str. Langeland 5404407 YP_001392802.1 CDS cbiO NC_009699.1 3793015 3793881 R with CbiNQ forms the ABC transporter for cobalt import; Clostridia have two adjacent copies of this gene; cobalt transporter ATP-binding subunit complement(3793015..3793881) Clostridium botulinum F str. Langeland 5405547 YP_001392803.1 CDS CLI_3632 NC_009699.1 3793866 3794714 R with CbiNQ forms the ABC transporter for cobalt import; Mycoplasmas have two adjacent copies of this gene; cobalt transporter ATP-binding subunit complement(3793866..3794714) Clostridium botulinum F str. Langeland 5405359 YP_001392804.1 CDS rplQ NC_009699.1 3794805 3795146 R is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 complement(3794805..3795146) Clostridium botulinum F str. Langeland 5404598 YP_001392805.1 CDS rpoA NC_009699.1 3795190 3796137 R catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha complement(3795190..3796137) Clostridium botulinum F str. Langeland 5402984 YP_001392806.1 CDS rpsD NC_009699.1 3796205 3796825 R primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 complement(3796205..3796825) Clostridium botulinum F str. Langeland 5404966 YP_001392807.1 CDS rpsK NC_009699.1 3796860 3797258 R located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 complement(3796860..3797258) Clostridium botulinum F str. Langeland 5402671 YP_001392808.1 CDS rpsM NC_009699.1 3797276 3797647 R located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 complement(3797276..3797647) Clostridium botulinum F str. Langeland 5405569 YP_001392809.1 CDS rpmJ NC_009699.1 3797760 3797873 R smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 complement(3797760..3797873) Clostridium botulinum F str. Langeland 5404811 YP_001392810.1 CDS infA NC_009699.1 3797890 3798108 R stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 complement(3797890..3798108) Clostridium botulinum F str. Langeland 5403585 YP_001392811.1 CDS CLI_3640 NC_009699.1 3798116 3798397 R hypothetical protein complement(3798116..3798397) Clostridium botulinum F str. Langeland 5404010 YP_001392812.1 CDS map-1 NC_009699.1 3798412 3799161 R identified by match to protein family HMM PF00557; match to protein family HMM TIGR00500; methionine aminopeptidase complement(3798412..3799161) Clostridium botulinum F str. Langeland 5403742 YP_001392813.1 CDS adk NC_009699.1 3799161 3799811 R essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase complement(3799161..3799811) Clostridium botulinum F str. Langeland 5404471 YP_001392814.1 CDS secY NC_009699.1 3799835 3801112 R forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY complement(3799835..3801112) Clostridium botulinum F str. Langeland 5405043 YP_001392815.1 CDS rplO NC_009699.1 3801113 3801553 R late assembly protein; 50S ribosomal protein L15 complement(3801113..3801553) Clostridium botulinum F str. Langeland 5402222 YP_001392816.1 CDS rpmD NC_009699.1 3801573 3801752 R L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 complement(3801573..3801752) Clostridium botulinum F str. Langeland 5402314 YP_001392817.1 CDS rpsE NC_009699.1 3801766 3802263 R located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 complement(3801766..3802263) Clostridium botulinum F str. Langeland 5403562 YP_001392818.1 CDS rplR NC_009699.1 3802281 3802640 R binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 complement(3802281..3802640) Clostridium botulinum F str. Langeland 5403826 YP_001392819.1 CDS rplF NC_009699.1 3802659 3803201 R ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 complement(3802659..3803201) Clostridium botulinum F str. Langeland 5405351 YP_001392820.1 CDS rpsH NC_009699.1 3803225 3803623 R binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 complement(3803225..3803623) Clostridium botulinum F str. Langeland 5404752 YP_001392821.1 CDS rpsN NC_009699.1 3803653 3803838 R located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif; 30S ribosomal protein S14 complement(3803653..3803838) Clostridium botulinum F str. Langeland 5402480 YP_001392822.1 CDS rplE NC_009699.1 3803855 3804397 R part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 complement(3803855..3804397) Clostridium botulinum F str. Langeland 5405151 YP_001392823.1 CDS rplX NC_009699.1 3804420 3804737 R assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 complement(3804420..3804737) Clostridium botulinum F str. Langeland 5402805 YP_001392824.1 CDS rplN NC_009699.1 3804761 3805129 R binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 complement(3804761..3805129) Clostridium botulinum F str. Langeland 5403867 YP_001392825.1 CDS rpsQ NC_009699.1 3805164 3805418 R primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 complement(3805164..3805418) Clostridium botulinum F str. Langeland 5402247 YP_001392826.1 CDS rpmC NC_009699.1 3805440 3805652 R one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 complement(3805440..3805652) Clostridium botulinum F str. Langeland 5404233 YP_001392827.1 CDS rplP NC_009699.1 3805642 3806085 R located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 complement(3805642..3806085) Clostridium botulinum F str. Langeland 5403206 YP_001392828.1 CDS rpsC NC_009699.1 3806103 3806774 R forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 complement(3806103..3806774) Clostridium botulinum F str. Langeland 5402183 YP_001392829.1 CDS rplV NC_009699.1 3806792 3807127 R binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 complement(3806792..3807127) Clostridium botulinum F str. Langeland 5402775 YP_001392830.1 CDS rpsS NC_009699.1 3807149 3807433 R protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 complement(3807149..3807433) Clostridium botulinum F str. Langeland 5404799 YP_001392831.1 CDS rplB NC_009699.1 3807503 3808336 R one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 complement(3807503..3808336) Clostridium botulinum F str. Langeland 5405668 YP_001392832.1 CDS rplW NC_009699.1 3808391 3808684 R binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 complement(3808391..3808684) Clostridium botulinum F str. Langeland 5404744 YP_001392833.1 CDS rplD NC_009699.1 3808684 3809304 R L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 complement(3808684..3809304) Clostridium botulinum F str. Langeland 5401853 YP_001392834.1 CDS rplC NC_009699.1 3809329 3809958 R binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 complement(3809329..3809958) Clostridium botulinum F str. Langeland 5404384 YP_001392835.1 CDS rpsJ NC_009699.1 3810048 3810356 R NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 complement(3810048..3810356) Clostridium botulinum F str. Langeland 5402740 YP_001392836.1 CDS tuf-1 NC_009699.1 3810746 3811939 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(3810746..3811939) Clostridium botulinum F str. Langeland 5403385 YP_001392837.1 CDS fusA-1 NC_009699.1 3811979 3814048 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(3811979..3814048) Clostridium botulinum F str. Langeland 5405422 YP_001392838.1 CDS rpsG NC_009699.1 3814120 3814590 R binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 complement(3814120..3814590) Clostridium botulinum F str. Langeland 5402237 YP_001392839.1 CDS rpsL NC_009699.1 3814751 3815128 R interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 complement(3814751..3815128) Clostridium botulinum F str. Langeland 5403286 YP_001392840.1 CDS CLI_3669 NC_009699.1 3815204 3815446 R identified by match to protein family HMM PF01248; ribosomal protein L7Ae family protein complement(3815204..3815446) Clostridium botulinum F str. Langeland 5405069 YP_001392841.1 CDS rpoC NC_009699.1 3815568 3819104 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' complement(3815568..3819104) Clostridium botulinum F str. Langeland 5402585 YP_001392842.1 CDS rpoB NC_009699.1 3819125 3822829 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta complement(3819125..3822829) Clostridium botulinum F str. Langeland 5404661 YP_001392843.1 CDS rplL NC_009699.1 3823104 3823472 R present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 complement(3823104..3823472) Clostridium botulinum F str. Langeland 5402703 YP_001392844.1 CDS rplJ NC_009699.1 3823520 3824020 R binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 complement(3823520..3824020) Clostridium botulinum F str. Langeland 5402297 YP_001392845.1 CDS rplA NC_009699.1 3824222 3824911 R in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 complement(3824222..3824911) Clostridium botulinum F str. Langeland 5403869 YP_001392846.1 CDS rplK NC_009699.1 3824968 3825393 R binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 complement(3824968..3825393) Clostridium botulinum F str. Langeland 5403893 YP_001392847.1 CDS nusG NC_009699.1 3825464 3825988 R Modulates Rho-dependent transcription termination; transcription antitermination protein NusG complement(3825464..3825988) Clostridium botulinum F str. Langeland 5403369 YP_001392848.1 CDS secE NC_009699.1 3826035 3826262 R forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE complement(3826035..3826262) Clostridium botulinum F str. Langeland 5405480 YP_001392849.1 CDS rpmG NC_009699.1 3826312 3826461 R in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group have the CXXC motif; 50S ribosomal protein L33 complement(3826312..3826461) Clostridium botulinum F str. Langeland 5404103 YP_001392850.1 CDS tuf-2 NC_009699.1 3826663 3827856 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(3826663..3827856) Clostridium botulinum F str. Langeland 5402050 YP_001392851.1 CDS sigH NC_009699.1 3828172 3828813 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 complement(3828172..3828813) Clostridium botulinum F str. Langeland 5402188 YP_001392852.1 CDS CLI_3684 NC_009699.1 3828887 3829396 R identified by match to protein family HMM PF05991; hypothetical protein complement(3828887..3829396) Clostridium botulinum F str. Langeland 5403674 YP_001392853.1 CDS CLI_3685 NC_009699.1 3829399 3830172 R identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; RNA methyltransferase complement(3829399..3830172) Clostridium botulinum F str. Langeland 5401909 YP_001392854.1 CDS thyX NC_009699.1 3830175 3830927 R flavin dependent thymidylate synthase; ThyX; thymidylate synthase complementing protein; catalyzes the formation of dTMP and tetrahydrofolate from dUMP and methylenetetrahydrofolate; the enzyme from Mycobacterium tuberculosis forms homotetramers; uses FAD as a cofactor; FAD-dependent thymidylate synthase complement(3830175..3830927) Clostridium botulinum F str. Langeland 5404005 YP_001392855.1 CDS CLI_3687 NC_009699.1 3830917 3831357 R identified by match to protein family HMM PF00636; RNase3 domain-containing protein complement(3830917..3831357) Clostridium botulinum F str. Langeland 5404676 YP_001392856.1 CDS cysS NC_009699.1 3831406 3832803 R catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase complement(3831406..3832803) Clostridium botulinum F str. Langeland 5402131 YP_001392857.1 CDS ilvA NC_009699.1 3832832 3834049 R identified by match to protein family HMM PF00291; match to protein family HMM TIGR01127; threonine dehydratase complement(3832832..3834049) Clostridium botulinum F str. Langeland 5403707 YP_001392858.1 CDS CLI_3690 NC_009699.1 3834121 3835758 R identified by match to protein family HMM PF03129; match to protein family HMM PF04073; prolyl-tRNA synthetase complement(3834121..3835758) Clostridium botulinum F str. Langeland 5404274 YP_001392859.1 CDS ispD NC_009699.1 3835869 3836558 R 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase complement(3835869..3836558) Clostridium botulinum F str. Langeland 5403462 YP_001392860.1 CDS CLI_3692 NC_009699.1 3836560 3837660 R identified by match to protein family HMM PF01850; match to protein family HMM PF01938; PIN/TRAM domain-containing protein complement(3836560..3837660) Clostridium botulinum F str. Langeland 5405394 YP_001392861.1 CDS CLI_3693 NC_009699.1 3838065 3838463 D hypothetical protein 3838065..3838463 Clostridium botulinum F str. Langeland 5404658 YP_001392862.1 CDS CLI_3694 NC_009699.1 3838495 3839556 R non-specific DNA-binding; scans chromosomes during sporulation for DNA-damage; delays initiation of sporulation; participates in a checkpoint signaling cascade for cell-cycle progression and DNA repair; DNA integrity scanning protein DisA complement(3838495..3839556) Clostridium botulinum F str. Langeland 5405399 YP_001392863.1 CDS radA NC_009699.1 3839575 3840933 R Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA complement(3839575..3840933) Clostridium botulinum F str. Langeland 5404467 YP_001392864.1 CDS clpC NC_009699.1 3841054 3843489 R identified by match to protein family HMM PF00004; match to protein family HMM PF02151; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; negative regulator of genetic competence MecB/ClpC complement(3841054..3843489) Clostridium botulinum F str. Langeland 5402726 YP_001392865.1 CDS CLI_3697 NC_009699.1 3843491 3844534 R identified by match to protein family HMM PF00217; ATP:guanido phosphotransferase complement(3843491..3844534) Clostridium botulinum F str. Langeland 5402114 YP_001392866.1 CDS CLI_3698 NC_009699.1 3844539 3845066 R identified by match to protein family HMM PF02151; UVR domain-containing protein complement(3844539..3845066) Clostridium botulinum F str. Langeland 5405120 YP_001392867.1 CDS ctsR NC_009699.1 3845089 3845553 R identified by match to protein family HMM PF05848; transciptional repressor CtsR complement(3845089..3845553) Clostridium botulinum F str. Langeland 5402192 YP_001392868.1 CDS CLI_3700 NC_009699.1 3845949 3846179 R hypothetical protein complement(3845949..3846179) Clostridium botulinum F str. Langeland 5402630 YP_001392869.1 CDS fusA-2 NC_009699.1 3846525 3848597 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(3846525..3848597) Clostridium botulinum F str. Langeland 5402294 YP_001392870.1 CDS murD NC_009699.1 3859609 3860985 R UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase complement(3859609..3860985) Clostridium botulinum F str. Langeland 5404263 YP_001392871.1 CDS CLI_3725 NC_009699.1 3861130 3861333 D identified by similarity to GB:AAY89025.1; hypothetical protein 3861130..3861333 Clostridium botulinum F str. Langeland 5403495 YP_001392872.1 CDS glyS NC_009699.1 3861809 3863200 R Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase complement(3861809..3863200) Clostridium botulinum F str. Langeland 5405464 YP_001392873.1 CDS lysS NC_009699.1 3863520 3865034 R class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase complement(3863520..3865034) Clostridium botulinum F str. Langeland 5404546 YP_001392874.1 CDS greA NC_009699.1 3865053 3865535 R necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA complement(3865053..3865535) Clostridium botulinum F str. Langeland 5403449 YP_001392875.1 CDS CLI_3729 NC_009699.1 3865666 3866493 R hypothetical protein complement(3865666..3866493) Clostridium botulinum F str. Langeland 5402464 YP_001392876.1 CDS CLI_3730 NC_009699.1 3866543 3867514 R identified by match to protein family HMM PF01180; match to protein family HMM PF01207; match to protein family HMM TIGR00737; dihydrouridine synthase complement(3866543..3867514) Clostridium botulinum F str. Langeland 5405272 YP_001392877.1 CDS CLI_3731 NC_009699.1 3867524 3868300 R type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase complement(3867524..3868300) Clostridium botulinum F str. Langeland 5402717 YP_001392878.1 CDS fhs NC_009699.1 3868455 3870128 R catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate; formate--tetrahydrofolate ligase complement(3868455..3870128) Clostridium botulinum F str. Langeland 5404758 YP_001392879.1 CDS ftsH-2 NC_009699.1 3870331 3872136 R identified by match to protein family HMM PF00004; match to protein family HMM PF01434; match to protein family HMM PF06480; match to protein family HMM PF07728; match to protein family HMM TIGR01241; ATP-dependent metalloprotease FtsH complement(3870331..3872136) Clostridium botulinum F str. Langeland 5405667 YP_001392880.1 CDS hpt-2 NC_009699.1 3872218 3872763 R identified by match to protein family HMM PF00156; match to protein family HMM TIGR01203; hypoxanthine phosphoribosyltransferase complement(3872218..3872763) Clostridium botulinum F str. Langeland 5402426 YP_001392881.1 CDS tilS NC_009699.1 3872747 3874153 R identified by match to protein family HMM PF01171; match to protein family HMM TIGR02432; match to protein family HMM TIGR02433; tRNA(Ile)-lysidine synthetase complement(3872747..3874153) Clostridium botulinum F str. Langeland 5404325 YP_001392882.1 CDS spoIIE NC_009699.1 3874302 3876689 R identified by match to protein family HMM PF07228; match to protein family HMM TIGR02865; stage II sporulation protein E complement(3874302..3876689) Clostridium botulinum F str. Langeland 5402401 YP_001392883.1 CDS CLI_3749 NC_009699.1 3877826 3878230 R identified by match to protein family HMM PF00575; hypothetical protein complement(3877826..3878230) Clostridium botulinum F str. Langeland 5404627 YP_001392884.1 CDS CLI_3750 NC_009699.1 3878292 3878561 R identified by match to protein family HMM PF04977; cell division protein FtsL complement(3878292..3878561) Clostridium botulinum F str. Langeland 5403765 YP_001392885.1 CDS CLI_3751 NC_009699.1 3878656 3879054 R identified by match to protein family HMM TIGR02893; hypothetical protein complement(3878656..3879054) Clostridium botulinum F str. Langeland 5402067 YP_001392886.1 CDS yabP NC_009699.1 3879069 3879359 R identified by match to protein family HMM PF07873; match to protein family HMM TIGR02892; sporulation protein YabP complement(3879069..3879359) Clostridium botulinum F str. Langeland 5402144 YP_001392887.1 CDS CLI_3753 NC_009699.1 3879479 3879718 R identified by match to protein family HMM PF01479; S4 domain-containing protein complement(3879479..3879718) Clostridium botulinum F str. Langeland 5403894 YP_001392888.1 CDS hup NC_009699.1 3879792 3880070 R identified by match to protein family HMM PF00216; DNA-binding protein HU complement(3879792..3880070) Clostridium botulinum F str. Langeland 5403069 YP_001392889.1 CDS CLI_3755 NC_009699.1 3880198 3881643 R identified by match to protein family HMM PF00590; match to protein family HMM PF03819; match to protein family HMM TIGR00444; MazG family protein complement(3880198..3881643) Clostridium botulinum F str. Langeland 5404933 YP_001392890.1 CDS spoVB-2 NC_009699.1 3881658 3883193 R identified by match to protein family HMM PF01554; match to protein family HMM PF01943; match to protein family HMM PF03023; stage V sporulation protein B complement(3881658..3883193) Clostridium botulinum F str. Langeland 5402956 YP_001392891.1 CDS CLI_3757 NC_009699.1 3883326 3883877 R identified by match to protein family HMM PF04014; match to protein family HMM TIGR01439; match to protein family HMM TIGR02851; stage V sporulation protein T complement(3883326..3883877) Clostridium botulinum F str. Langeland 5404978 YP_001392892.1 CDS prsA NC_009699.1 3884076 3885086 R cis/trans isomerase of peptidylprolyl; PPIase; membrane-bound lipoprotein; peptidyl-prolyl isomerase complement(3884076..3885086) Clostridium botulinum F str. Langeland 5405141 YP_001392893.1 CDS mfd NC_009699.1 3885170 3888676 R identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF02559; match to protein family HMM PF03461; match to protein family HMM PF04851; match to protein family HMM TIGR00580; transcription-repair coupling factor complement(3885170..3888676) Clostridium botulinum F str. Langeland 5405184 YP_001392894.1 CDS pth NC_009699.1 3888704 3889273 R Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase complement(3888704..3889273) Clostridium botulinum F str. Langeland 5402888 YP_001392895.1 CDS CLI_3761 NC_009699.1 3889383 3890555 R identified by match to protein family HMM PF00089; match to protein family HMM PF00595; protease complement(3889383..3890555) Clostridium botulinum F str. Langeland 5404134 YP_001392896.1 CDS CLI_3762 NC_009699.1 3890590 3891999 R identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase complement(3890590..3891999) Clostridium botulinum F str. Langeland 5403229 YP_001392897.1 CDS CLI_3763 NC_009699.1 3892000 3892686 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator complement(3892000..3892686) Clostridium botulinum F str. Langeland 5403417 YP_001392898.1 CDS prsA-2 NC_009699.1 3892866 3893825 R catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase complement(3892866..3893825) Clostridium botulinum F str. Langeland 5404147 YP_001392899.1 CDS glmU NC_009699.1 3893846 3895219 R forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase complement(3893846..3895219) Clostridium botulinum F str. Langeland 5403178 YP_001392900.1 CDS spoVG NC_009699.1 3895382 3895669 R stage V sporulation protein G; essential for spore formation and a negative regulator of asymmetric septation in Bacillus; involved in methicillin-resistance, biofilm formation and capsular polysaccharide synthesis in Staphylococcus; regulatory protein SpoVG complement(3895382..3895669) Clostridium botulinum F str. Langeland 5402266 YP_001392901.1 CDS purR NC_009699.1 3895772 3896587 R identified by match to protein family HMM PF00156; match to protein family HMM PF09182; match to protein family HMM TIGR01743; pur operon repressor complement(3895772..3896587) Clostridium botulinum F str. Langeland 5402339 YP_001392902.1 CDS murC NC_009699.1 3896787 3898163 D Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 3896787..3898163 Clostridium botulinum F str. Langeland 5403847 YP_001392903.1 CDS CLI_3769 NC_009699.1 3898228 3898536 D hypothetical protein 3898228..3898536 Clostridium botulinum F str. Langeland 5404008 YP_001392904.1 CDS CLI_3772 NC_009699.1 3898782 3900131 D identified by match to protein family HMM PF00037; match to protein family HMM PF02906; [Fe] hydrogenase 3898782..3900131 Clostridium botulinum F str. Langeland 5403944 YP_001392905.1 CDS CLI_3773 NC_009699.1 3900217 3900861 D identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; haloacid dehalogenase 3900217..3900861 Clostridium botulinum F str. Langeland 5404238 YP_001392906.1 CDS CLI_3774 NC_009699.1 3901136 3901534 D hypothetical protein 3901136..3901534 Clostridium botulinum F str. Langeland 5403459 YP_001392907.1 CDS CLI_3775 NC_009699.1 3901601 3902320 R catalyzes the formation of (2R)-3-sulfolactate from (2R)-2-phospho-3-sulfolactate; 2-phosphosulfolactate phosphatase complement(3901601..3902320) Clostridium botulinum F str. Langeland 5403642 YP_001392908.1 CDS CLI_3776 NC_009699.1 3902365 3903297 R identified by match to protein family HMM PF04055; match to protein family HMM TIGR01212; radical SAM family protein complement(3902365..3903297) Clostridium botulinum F str. Langeland 5403346 YP_001392909.1 CDS CLI_3777 NC_009699.1 3903365 3904492 R phage head-tail adaptor complement(3903365..3904492) Clostridium botulinum F str. Langeland 5404533 YP_001392910.1 CDS CLI_3778 NC_009699.1 3904631 3905677 D hypothetical protein 3904631..3905677 Clostridium botulinum F str. Langeland 5401878 YP_001392911.1 CDS CLI_3779 NC_009699.1 3905710 3906606 D identified by match to protein family HMM PF04055; radical SAM domain-containing protein 3905710..3906606 Clostridium botulinum F str. Langeland 5403465 YP_001392912.1 CDS CLI_3780 NC_009699.1 3906749 3908545 R identified by match to protein family HMM PF00015; match to protein family HMM PF07700; methyl-accepting chemotaxis protein complement(3906749..3908545) Clostridium botulinum F str. Langeland 5405042 YP_001392913.1 CDS CLI_3781 NC_009699.1 3908848 3909510 R identified by match to protein family HMM PF01381; DNA-binding protein complement(3908848..3909510) Clostridium botulinum F str. Langeland 5403793 YP_001392914.1 CDS CLI_3782 NC_009699.1 3909524 3909898 R hypothetical protein complement(3909524..3909898) Clostridium botulinum F str. Langeland 5402180 YP_001392915.1 CDS CLI_3783 NC_009699.1 3909916 3910434 R identified by match to protein family HMM PF00160; cyclophilin type peptidyl-prolyl cis-trans isomerase complement(3909916..3910434) Clostridium botulinum F str. Langeland 5404455 YP_001392916.1 CDS murI NC_009699.1 3910581 3911354 R converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase complement(3910581..3911354) Clostridium botulinum F str. Langeland 5404084 YP_001392917.1 CDS CLI_3785 NC_009699.1 3911547 3913445 D identified by match to protein family HMM PF00120; glutamine synthetase 3911547..3913445 Clostridium botulinum F str. Langeland 5402344 YP_001392918.1 CDS CLI_3786 NC_009699.1 3913490 3914038 R hypothetical protein complement(3913490..3914038) Clostridium botulinum F str. Langeland 5405040 YP_001392919.1 CDS murA-2 NC_009699.1 3914434 3915687 D adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 3914434..3915687 Clostridium botulinum F str. Langeland 5404751 YP_001392920.1 CDS CLI_3788 NC_009699.1 3915713 3916498 D identified by match to protein family HMM PF00753; metallo-beta-lactamase family protein 3915713..3916498 Clostridium botulinum F str. Langeland 5404182 YP_001392921.1 CDS CLI_3789 NC_009699.1 3916515 3917084 D lipoprotein 3916515..3917084 Clostridium botulinum F str. Langeland 5403460 YP_001392922.1 CDS CLI_3790 NC_009699.1 3917099 3917602 D identified by match to protein family HMM PF02810; hypothetical protein 3917099..3917602 Clostridium botulinum F str. Langeland 5402134 YP_001392923.1 CDS CLI_3791 NC_009699.1 3917781 3918260 D SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 3917781..3918260 Clostridium botulinum F str. Langeland 5404522 YP_001392924.1 CDS CLI_3792 NC_009699.1 3918702 3919919 R identified by match to protein family HMM PF07690; major facilitator family protein complement(3918702..3919919) Clostridium botulinum F str. Langeland 5404920 YP_001392925.1 CDS CLI_3793 NC_009699.1 3919955 3920590 R identified by match to protein family HMM PF03358; NADPH-dependent FMN reductase complement(3919955..3920590) Clostridium botulinum F str. Langeland 5404749 YP_001392926.1 CDS CLI_3794 NC_009699.1 3920882 3921454 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 3920882..3921454 Clostridium botulinum F str. Langeland 5403993 YP_001392927.1 CDS CLI_3795 NC_009699.1 3921701 3922087 D identified by match to protein family HMM PF00165; AraC family transcriptional regulator 3921701..3922087 Clostridium botulinum F str. Langeland 5405205 YP_001392928.1 CDS map-2 NC_009699.1 3922119 3922994 D identified by match to protein family HMM PF00557; match to protein family HMM PF02810; match to protein family HMM TIGR00500; methionine aminopeptidase 3922119..3922994 Clostridium botulinum F str. Langeland 5403414 YP_001392929.1 CDS CLI_3797 NC_009699.1 3923075 3923614 R identified by match to protein family HMM PF00881; nitroreductase family protein complement(3923075..3923614) Clostridium botulinum F str. Langeland 5403239 YP_001392930.1 CDS prdB-2 NC_009699.1 3925343 3926068 R identified by similarity to GB:CAB38127.2; D-proline reductase subunit PrdB complement(3925343..3926068) Clostridium botulinum F str. Langeland 5405438 YP_001392931.1 CDS CLI_3801 NC_009699.1 3926095 3926286 R identified by similarity to GB:CAJ70140.1; hypothetical protein complement(3926095..3926286) Clostridium botulinum F str. Langeland 5403193 YP_001392932.1 CDS CLI_3802 NC_009699.1 3926289 3928034 R identified by match to protein family HMM PF09338; glycine/sarcosine/betaine reductase, component B subunits alpha and beta complement(3926289..3928034) Clostridium botulinum F str. Langeland 5404652 YP_001392933.1 CDS CLI_3803 NC_009699.1 3928147 3929433 R identified by match to protein family HMM PF01512; respiratory-chain NADH dehydrogenase family protein complement(3928147..3929433) Clostridium botulinum F str. Langeland 5403071 YP_001392934.1 CDS CLI_3804 NC_009699.1 3929991 3931487 D hypothetical protein 3929991..3931487 Clostridium botulinum F str. Langeland 5404046 YP_001392935.1 CDS CLI_3805 NC_009699.1 3931480 3932316 D identified by match to protein family HMM PF00037; match to protein family HMM PF04055; radical SAM domain-containing protein 3931480..3932316 Clostridium botulinum F str. Langeland 5405477 YP_001392936.1 CDS CLI_3806 NC_009699.1 3932732 3932983 D hypothetical protein 3932732..3932983 Clostridium botulinum F str. Langeland 5404700 YP_001392937.1 CDS CLI_3807 NC_009699.1 3932986 3934032 D catalyzes the formation of biotin from dethiobiotin and sulfur; biotin synthase 3932986..3934032 Clostridium botulinum F str. Langeland 5403105 YP_001392938.1 CDS thiH NC_009699.1 3934033 3935409 D in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and IscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; in Thermotoga this enzyme has an extra C-terminal domain; thiamine biosynthesis protein ThiH 3934033..3935409 Clostridium botulinum F str. Langeland 5402111 YP_001392939.1 CDS CLI_3809 NC_009699.1 3935418 3936617 D identified by match to protein family HMM PF01926; match to protein family HMM TIGR00231; GTP-binding protein 3935418..3936617 Clostridium botulinum F str. Langeland 5402998 YP_001392940.1 CDS CLI_3810 NC_009699.1 3936932 3938305 D identified by match to protein family HMM PF00474; sodium:solute symporter family protein 3936932..3938305 Clostridium botulinum F str. Langeland 5403451 YP_001392941.1 CDS CLI_3811 NC_009699.1 3938605 3939849 D identified by match to protein family HMM PF00534; glycoside hydrolase family protein 3938605..3939849 Clostridium botulinum F str. Langeland 5404076 YP_001392942.1 CDS CLI_3812 NC_009699.1 3940011 3940688 R identified by match to protein family HMM PF02811; phosphotransferase domain-containing protein complement(3940011..3940688) Clostridium botulinum F str. Langeland 5405178 YP_001392943.1 CDS CLI_3813 NC_009699.1 3940984 3941472 D identified by match to protein family HMM PF08761; hypothetical protein 3940984..3941472 Clostridium botulinum F str. Langeland 5402627 YP_001392944.1 CDS CLI_3814 NC_009699.1 3941579 3942010 D identified by match to protein family HMM PF04657; hypothetical protein 3941579..3942010 Clostridium botulinum F str. Langeland 5403329 YP_001392945.1 CDS CLI_3815 NC_009699.1 3942191 3943096 D identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 3942191..3943096 Clostridium botulinum F str. Langeland 5403496 YP_001392946.1 CDS CLI_3816 NC_009699.1 3943184 3944380 D identified by match to protein family HMM PF00082; subtilase family protein 3943184..3944380 Clostridium botulinum F str. Langeland 5403796 YP_001392947.1 CDS CLI_3817 NC_009699.1 3944416 3945297 R identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator complement(3944416..3945297) Clostridium botulinum F str. Langeland 5403909 YP_001392948.1 CDS CLI_3818 NC_009699.1 3945326 3946273 R identified by match to protein family HMM PF00389; match to protein family HMM PF02826; D-isomer specific 2-hydroxyacid dehydrogenase complement(3945326..3946273) Clostridium botulinum F str. Langeland 5402872 YP_001392949.1 CDS accA NC_009699.1 3946473 3947312 R identified by match to protein family HMM PF03255; match to protein family HMM TIGR00513; acetyl-CoA carboxylase, carboxyl transferase subunit alpha complement(3946473..3947312) Clostridium botulinum F str. Langeland 5402352 YP_001392950.1 CDS accD NC_009699.1 3947359 3948228 R identified by match to protein family HMM TIGR00515; acetyl-CoA carboxylase, carboxyl transferase subunit beta complement(3947359..3948228) Clostridium botulinum F str. Langeland 5405520 YP_001392951.1 CDS accC NC_009699.1 3948248 3949594 R identified by match to protein family HMM PF00289; match to protein family HMM PF01071; match to protein family HMM PF02222; match to protein family HMM PF02785; match to protein family HMM PF02786; match to protein family HMM PF08443; match to protein family HMM TIGR00514; biotin carboxylase complement(3948248..3949594) Clostridium botulinum F str. Langeland 5402863 YP_001392952.1 CDS fabZ NC_009699.1 3949626 3950060 R in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase complement(3949626..3950060) Clostridium botulinum F str. Langeland 5402614 YP_001392953.1 CDS accB NC_009699.1 3950080 3950556 R identified by match to protein family HMM PF00364; match to protein family HMM TIGR00531; acetyl-CoA carboxylase, biotin carboxyl carrier protein complement(3950080..3950556) Clostridium botulinum F str. Langeland 5401980 YP_001392954.1 CDS fabF NC_009699.1 3950560 3951798 R FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase complement(3950560..3951798) Clostridium botulinum F str. Langeland 5404557 YP_001392955.1 CDS fabG NC_009699.1 3951818 3952564 R catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase complement(3951818..3952564) Clostridium botulinum F str. Langeland 5403904 YP_001392956.1 CDS fabD NC_009699.1 3952582 3953526 R identified by match to protein family HMM PF00698; match to protein family HMM TIGR00128; malonyl CoA-acyl carrier protein transacylase complement(3952582..3953526) Clostridium botulinum F str. Langeland 5405636 YP_001392957.1 CDS CLI_3827 NC_009699.1 3953547 3954473 R identified by match to protein family HMM PF03060; match to protein family HMM TIGR03151; 2-nitropropane dioxygenase complement(3953547..3954473) Clostridium botulinum F str. Langeland 5402390 YP_001392958.1 CDS acpP-2 NC_009699.1 3954599 3954823 R identified by match to protein family HMM PF00550; acyl carrier protein complement(3954599..3954823) Clostridium botulinum F str. Langeland 5403782 YP_001392959.1 CDS fabH NC_009699.1 3954864 3955844 R identified by match to protein family HMM PF08541; match to protein family HMM PF08545; match to protein family HMM TIGR00747; 3-oxoacyl-ACP synthase complement(3954864..3955844) Clostridium botulinum F str. Langeland 5402679 YP_001392960.1 CDS CLI_3830 NC_009699.1 3955837 3956313 R identified by match to protein family HMM PF01047; match to protein family HMM PF03965; MarR family transcriptional regulator complement(3955837..3956313) Clostridium botulinum F str. Langeland 5403032 YP_001392961.1 CDS CLI_3831 NC_009699.1 3956329 3957387 R identified by match to protein family HMM PF03060; 2-nitropropane dioxygenase complement(3956329..3957387) Clostridium botulinum F str. Langeland 5404212 YP_001392962.1 CDS CLI_3832 NC_009699.1 3957484 3958419 R identified by match to protein family HMM PF01551; peptidase complement(3957484..3958419) Clostridium botulinum F str. Langeland 5405161 YP_001392963.1 CDS CLI_3833 NC_009699.1 3958600 3959586 D identified by match to protein family HMM PF04271; match to protein family HMM TIGR01446; DNA replication protein DnaD 3958600..3959586 Clostridium botulinum F str. Langeland 5402112 YP_001392964.1 CDS CLI_3834 NC_009699.1 3959579 3960556 D acts to load the DnaB helicase onto the initiation site during DNA replication; DNA replication protein DnaC 3959579..3960556 Clostridium botulinum F str. Langeland 5403094 YP_001392967.1 CDS CLI_3856 NC_009699.1 3961802 3962611 R identified by match to protein family HMM PF03618; hypothetical protein complement(3961802..3962611) Clostridium botulinum F str. Langeland 5402304 YP_001392968.1 CDS CLI_3857 NC_009699.1 3962624 3962998 R identified by match to protein family HMM PF02629; CoA-binding protein complement(3962624..3962998) Clostridium botulinum F str. Langeland 5404236 YP_001392969.1 CDS CLI_3858 NC_009699.1 3963179 3964408 D identified by match to protein family HMM PF03486; match to protein family HMM TIGR00275; pyridine nucleotide-disulfide oxidoreductase family protein 3963179..3964408 Clostridium botulinum F str. Langeland 5402953 YP_001392970.1 CDS CLI_3859 NC_009699.1 3964510 3965259 R identified by match to protein family HMM PF01643; acyl-ACP thioesterase complement(3964510..3965259) Clostridium botulinum F str. Langeland 5405211 YP_001392971.1 CDS CLI_3860 NC_009699.1 3965362 3965547 R hypothetical protein complement(3965362..3965547) Clostridium botulinum F str. Langeland 5402029 YP_001392972.1 CDS purA NC_009699.1 3965673 3966959 R catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase complement(3965673..3966959) Clostridium botulinum F str. Langeland 5402819 YP_001392973.1 CDS CLI_3862 NC_009699.1 3967191 3968576 R pyridine nucleotide-disulfide oxidoreductase family protein complement(3967191..3968576) Clostridium botulinum F str. Langeland 5404558 YP_001392974.1 CDS CLI_3863 NC_009699.1 3968746 3968961 R identified by Glimmer3; hypothetical protein complement(3968746..3968961) Clostridium botulinum F str. Langeland 5405311 YP_001392975.1 CDS CLI_3864 NC_009699.1 3969147 3970868 R identified by match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; phosphoglucomutase/phosphomannomutase family protein complement(3969147..3970868) Clostridium botulinum F str. Langeland 5402259 YP_001392976.1 CDS dnaB NC_009699.1 3971110 3972447 R unwinds double stranded DNA; replicative DNA helicase complement(3971110..3972447) Clostridium botulinum F str. Langeland 5405414 YP_001392977.1 CDS CLI_3866 NC_009699.1 3972478 3974397 R identified by match to protein family HMM PF00004; match to protein family HMM PF01078; match to protein family HMM PF05362; match to protein family HMM PF07728; match to protein family HMM TIGR02903; ATP-dependent protease complement(3972478..3974397) Clostridium botulinum F str. Langeland 5403950 YP_001392978.1 CDS rplI NC_009699.1 3974408 3974851 R in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 complement(3974408..3974851) Clostridium botulinum F str. Langeland 5404507 YP_001392979.1 CDS CLI_3868 NC_009699.1 3974851 3976836 R identified by match to protein family HMM PF01368; match to protein family HMM PF02272; DHH family protein complement(3974851..3976836) Clostridium botulinum F str. Langeland 5402705 YP_001392980.1 CDS CLI_3869 NC_009699.1 3976837 3977841 R hypothetical protein complement(3976837..3977841) Clostridium botulinum F str. Langeland 5402358 YP_001392981.1 CDS CLI_3870 NC_009699.1 3977853 3978170 R hypothetical protein complement(3977853..3978170) Clostridium botulinum F str. Langeland 5405358 YP_001392982.1 CDS rpsR NC_009699.1 3978318 3978560 R binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 complement(3978318..3978560) Clostridium botulinum F str. Langeland 5402736 YP_001392983.1 CDS ssb NC_009699.1 3978579 3979025 R identified by match to protein family HMM PF00436; match to protein family HMM PF01336; match to protein family HMM TIGR00621; single-strand binding protein complement(3978579..3979025) Clostridium botulinum F str. Langeland 5402331 YP_001392984.1 CDS rpsF NC_009699.1 3979041 3979325 R binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 complement(3979041..3979325) Clostridium botulinum F str. Langeland 5405033 YP_001392985.1 CDS CLI_3874 NC_009699.1 3979431 3980579 R identified by match to protein family HMM PF06050; R-2-hydroxyglutaryl-CoA dehydratase subunit complement(3979431..3980579) Clostridium botulinum F str. Langeland 5403408 YP_001392986.1 CDS CLI_3875 NC_009699.1 3980853 3981050 R identified by match to protein family HMM PF06107; hypothetical protein complement(3980853..3981050) Clostridium botulinum F str. Langeland 5404354 YP_001392987.1 CDS CLI_3876 NC_009699.1 3981066 3981935 R identified by match to protein family HMM PF00924; mechanosensitive ion channel family protein complement(3981066..3981935) Clostridium botulinum F str. Langeland 5402866 YP_001392988.1 CDS CLI_3877 NC_009699.1 3981942 3982187 R hypothetical protein complement(3981942..3982187) Clostridium botulinum F str. Langeland 5405599 YP_001392989.1 CDS CLI_3878 NC_009699.1 3982378 3983532 D identified by match to protein family HMM PF00266; match to protein family HMM TIGR01977; cysteine desulfurase 3982378..3983532 Clostridium botulinum F str. Langeland 5401965 YP_001392990.1 CDS ytvI NC_009699.1 3983546 3984601 D identified by match to protein family HMM PF01594; match to protein family HMM TIGR02872; sporulation integral membrane protein YtvI 3983546..3984601 Clostridium botulinum F str. Langeland 5403749 YP_001392991.1 CDS CLI_3880 NC_009699.1 3984659 3985240 D identified by match to protein family HMM PF06866; match to protein family HMM TIGR02841; hypothetical protein 3984659..3985240 Clostridium botulinum F str. Langeland 5404835 YP_001392992.1 CDS CLI_3881 NC_009699.1 3985242 3985487 R identified by Glimmer3; hypothetical protein complement(3985242..3985487) Clostridium botulinum F str. Langeland 5403114 YP_001392993.1 CDS CLI_3882 NC_009699.1 3985540 3986049 R hypothetical protein complement(3985540..3986049) Clostridium botulinum F str. Langeland 5404114 YP_001392994.1 CDS CLI_3883 NC_009699.1 3986087 3986935 R identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180; stage 0 sporulation protein J complement(3986087..3986935) Clostridium botulinum F str. Langeland 5402333 YP_001392995.1 CDS soj NC_009699.1 3986951 3987715 R identified by match to protein family HMM PF01656; sporulation initiation inhibitor protein soj complement(3986951..3987715) Clostridium botulinum F str. Langeland 5402544 YP_001392996.1 CDS CLI_3885 NC_009699.1 3987839 3988618 R identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180; parB family protein complement(3987839..3988618) Clostridium botulinum F str. Langeland 5405289 YP_001392997.1 CDS gidB NC_009699.1 3988718 3989437 R glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB complement(3988718..3989437) Clostridium botulinum F str. Langeland 5404731 YP_001392998.1 CDS gidA-2 NC_009699.1 3989461 3991338 R GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA complement(3989461..3991338) Clostridium botulinum F str. Langeland 5404449 YP_001392999.1 CDS trmE NC_009699.1 3991347 3992732 R in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE complement(3991347..3992732) Clostridium botulinum F str. Langeland 5402282 YP_001393000.1 CDS jag NC_009699.1 3992780 3993406 R identified by match to protein family HMM PF01424; jag protein complement(3992780..3993406) Clostridium botulinum F str. Langeland 5403420 YP_001393001.1 CDS oxaA NC_009699.1 3993424 3994077 R functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; inner membrane protein translocase component YidC complement(3993424..3994077) Clostridium botulinum F str. Langeland 5403522 YP_001393002.1 CDS CLI_3891 NC_009699.1 3994103 3994312 R identified by match to protein family HMM PF01809; match to protein family HMM TIGR00278; hypothetical protein complement(3994103..3994312) Clostridium botulinum F str. Langeland 5403862 YP_001393003.1 CDS rnpA NC_009699.1 3994309 3994644 R protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P complement(3994309..3994644) Clostridium botulinum F str. Langeland 5405509 YP_001393004.1 CDS rpmH NC_009699.1 3994699 3994833 R in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 complement(3994699..3994833) Clostridium botulinum F str. Langeland 5402943 YP_001393005.1 CDS CLI_A0001 NC_009700.1 64 240 D identified by Glimmer3; putative; hypothetical protein 64..240 Clostridium botulinum F str. Langeland 5405669 YP_001393006.1 CDS CLI_A0002 NC_009700.1 268 468 D identified by Glimmer3; putative; hypothetical protein 268..468 Clostridium botulinum F str. Langeland 5405676 YP_001393007.1 CDS CLI_A0003 NC_009700.1 528 896 D identified by Glimmer3; putative; hypothetical protein 528..896 Clostridium botulinum F str. Langeland 5405680 YP_001393008.1 CDS CLI_A0004 NC_009700.1 1172 1348 R identified by Glimmer3; putative; hypothetical protein complement(1172..1348) Clostridium botulinum F str. Langeland 5405677 YP_001393009.1 CDS CLI_A0005 NC_009700.1 1537 1701 D identified by Glimmer3; putative; hypothetical protein 1537..1701 Clostridium botulinum F str. Langeland 5405686 YP_001393010.1 CDS CLI_A0006 NC_009700.1 1721 1897 D identified by Glimmer3; putative; hypothetical protein 1721..1897 Clostridium botulinum F str. Langeland 5405691 YP_001393011.1 CDS CLI_A0007 NC_009700.1 1965 2381 R identified by Glimmer3; putative; hypothetical protein complement(1965..2381) Clostridium botulinum F str. Langeland 5405675 YP_001393012.1 CDS CLI_A0008 NC_009700.1 2384 2578 R identified by match to protein family HMM PF01381; hypothetical protein complement(2384..2578) Clostridium botulinum F str. Langeland 5405689 YP_001393013.1 CDS CLI_A0009 NC_009700.1 2904 3479 D identified by match to protein family HMM PF00589; phage integrase 2904..3479 Clostridium botulinum F str. Langeland 5405684 YP_001393014.1 CDS CLI_A0010 NC_009700.1 3911 4087 D identified by Glimmer3; putative; hypothetical protein 3911..4087 Clostridium botulinum F str. Langeland 5405688 YP_001393015.1 CDS CLI_A0011 NC_009700.1 4527 5339 D identified by match to protein family HMM PF02517; caax amino protease family protein 4527..5339 Clostridium botulinum F str. Langeland 5405679 YP_001393016.1 CDS CLI_A0012 NC_009700.1 5606 6619 R identified by match to protein family HMM PF01051; RepB family protein complement(5606..6619) Clostridium botulinum F str. Langeland 5405681 YP_001393017.1 CDS CLI_A0013 NC_009700.1 6817 6936 R identified by Glimmer3; putative; hypothetical protein complement(6817..6936) Clostridium botulinum F str. Langeland 5405671 YP_001393018.1 CDS CLI_A0014 NC_009700.1 7202 7732 D identified by match to protein family HMM TIGR02937; sigma-70 family RNA polymerase sigma factor 7202..7732 Clostridium botulinum F str. Langeland 5405673 YP_001393019.1 CDS CLI_A0015 NC_009700.1 8465 9109 R identified by match to protein family HMM PF00300; putative phosphoglycerate mutase family protein complement(8465..9109) Clostridium botulinum F str. Langeland 5405674 YP_001393020.1 CDS CLI_A0016 NC_009700.1 9455 9676 D identified by similarity to GB:AAK76916.1; hypothetical protein 9455..9676 Clostridium botulinum F str. Langeland 5405683 YP_001393021.1 CDS CLI_A0017 NC_009700.1 9696 9923 D hypothetical protein 9696..9923 Clostridium botulinum F str. Langeland 5405682 YP_001393022.1 CDS CLI_A0018 NC_009700.1 9995 10222 R hypothetical protein complement(9995..10222) Clostridium botulinum F str. Langeland 5405672 YP_001393023.1 CDS CLI_A0019 NC_009700.1 10224 10709 R identified by similarity to GB:CAH05747.1; hypothetical protein complement(10224..10709) Clostridium botulinum F str. Langeland 5405690 YP_001393024.1 CDS CLI_A0020 NC_009700.1 10706 10930 R hypothetical protein complement(10706..10930) Clostridium botulinum F str. Langeland 5405692 YP_001393025.1 CDS CLI_A0021 NC_009700.1 11158 12549 R replication protein complement(11158..12549) Clostridium botulinum F str. Langeland 5405670 YP_001393026.1 CDS CLI_A0022 NC_009700.1 12781 13545 R identified by Glimmer3; putative; hypothetical protein complement(12781..13545) Clostridium botulinum F str. Langeland 5405685 YP_001393027.1 CDS CLI_A0023 NC_009700.1 13718 15148 R putative bacteriocin ABC transporter, bacteriocin-binding protein complement(13718..15148) Clostridium botulinum F str. Langeland 5405678 YP_001393028.1 CDS CLI_A0024 NC_009700.1 15148 17370 R identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM PF03412; match to protein family HMM TIGR01193; ABC transporter CbaT complement(15148..17370) Clostridium botulinum F str. Langeland 5405687 CLI_0016 tRNA CLI_0016 NC_009699.1 14031 14109 D tRNA-Met 14031..14109 Clostridium botulinum F str. Langeland 5405263 CLI_0015 tRNA CLI_0015 NC_009699.1 14032 14108 D tRNA-Met 14032..14108 Clostridium botulinum F str. Langeland 5402289 CLI_0018 tRNA CLI_0018 NC_009699.1 14111 14188 D tRNA-Ala 14111..14188 Clostridium botulinum F str. Langeland 5402185 CLI_0017 tRNA CLI_0017 NC_009699.1 14112 14187 D tRNA-Ala 14112..14187 Clostridium botulinum F str. Langeland 5402392 CLI_0028 tRNA CLI_0028 NC_009699.1 23823 23915 D tRNA-Ser 23823..23915 Clostridium botulinum F str. Langeland 5402310 CLI_0027 tRNA CLI_0027 NC_009699.1 23824 23914 D tRNA-Ser 23824..23914 Clostridium botulinum F str. Langeland 5402695 CLI_0030 tRNA CLI_0030 NC_009699.1 23934 24026 D tRNA-Ser 23934..24026 Clostridium botulinum F str. Langeland 5403617 CLI_0029 tRNA CLI_0029 NC_009699.1 23935 24025 D tRNA-Ser 23935..24025 Clostridium botulinum F str. Langeland 5403080 CLI_0033 tRNA CLI_0033 NC_009699.1 25557 25649 D tRNA-Ser 25557..25649 Clostridium botulinum F str. Langeland 5403078 CLI_0032 tRNA CLI_0032 NC_009699.1 25558 25648 D tRNA-Ser 25558..25648 Clostridium botulinum F str. Langeland 5403190 CLI_0035 tRNA CLI_0035 NC_009699.1 25668 25760 D tRNA-Ser 25668..25760 Clostridium botulinum F str. Langeland 5403295 CLI_0034 tRNA CLI_0034 NC_009699.1 25669 25759 D tRNA-Ser 25669..25759 Clostridium botulinum F str. Langeland 5402303 CLI_0037 tRNA CLI_0037 NC_009699.1 25843 25921 D tRNA-Arg 25843..25921 Clostridium botulinum F str. Langeland 5404283 CLI_0036 tRNA CLI_0036 NC_009699.1 25844 25920 D tRNA-Arg 25844..25920 Clostridium botulinum F str. Langeland 5402302 CLI_0041 tRNA CLI_0041 NC_009699.1 29125 29201 D tRNA-Arg 29125..29201 Clostridium botulinum F str. Langeland 5404645 CLI_0046 tRNA CLI_0046 NC_009699.1 32972 33063 D tRNA-Ser 32972..33063 Clostridium botulinum F str. Langeland 5404616 CLI_0045 tRNA CLI_0045 NC_009699.1 32973 33062 D tRNA-Ser 32973..33062 Clostridium botulinum F str. Langeland 5402903 CLI_0066 tRNA CLI_0066 NC_009699.1 48608 48685 D tRNA-Lys 48608..48685 Clostridium botulinum F str. Langeland 5404261 CLI_0065 tRNA CLI_0065 NC_009699.1 48609 48684 D tRNA-Lys 48609..48684 Clostridium botulinum F str. Langeland 5405267 CLI_0074 tRNA CLI_0074 NC_009699.1 55062 55139 D tRNA-Lys 55062..55139 Clostridium botulinum F str. Langeland 5405265 CLI_0073 tRNA CLI_0073 NC_009699.1 55063 55138 D tRNA-Lys 55063..55138 Clostridium botulinum F str. Langeland 5402291 CLI_t01 tRNA CLI_t01 NC_009699.1 62928 63003 D tRNA-Phe 62928..63003 Clostridium botulinum F str. Langeland 5548028 CLI_t02 tRNA CLI_t02 NC_009699.1 69867 69942 D tRNA-Phe 69867..69942 Clostridium botulinum F str. Langeland 5548027 CLI_0104 tRNA CLI_0104 NC_009699.1 77255 77328 D tRNA-Cys 77255..77328 Clostridium botulinum F str. Langeland 5404260 CLI_3897 tRNA CLI_3897 NC_009699.1 195071 195146 D tRNA-Thr 195071..195146 Clostridium botulinum F str. Langeland 8535601 CLI_3898 tRNA CLI_3898 NC_009699.1 195151 195237 D tRNA-Tyr 195151..195237 Clostridium botulinum F str. Langeland 8535598 CLI_0226 tRNA CLI_0226 NC_009699.1 195249 195326 D tRNA-Val 195249..195326 Clostridium botulinum F str. Langeland 5402062 CLI_0225 tRNA CLI_0225 NC_009699.1 195250 195325 D tRNA-Val 195250..195325 Clostridium botulinum F str. Langeland 5403777 CLI_0227 tRNA CLI_0227 NC_009699.1 195343 195418 D tRNA-Thr 195343..195418 Clostridium botulinum F str. Langeland 5401976 CLI_0229 tRNA CLI_0229 NC_009699.1 195423 195509 D tRNA-Tyr 195423..195509 Clostridium botulinum F str. Langeland 5404704 CLI_0228 tRNA CLI_0228 NC_009699.1 195424 195508 D tRNA-Tyr 195424..195508 Clostridium botulinum F str. Langeland 5402759 CLI_0251 tRNA CLI_0251 NC_009699.1 222348 222424 R tRNA-Gln complement(222348..222424) Clostridium botulinum F str. Langeland 5404372 CLI_0252 tRNA CLI_0252 NC_009699.1 222349 222423 R tRNA-Gln complement(222349..222423) Clostridium botulinum F str. Langeland 5401977 CLI_0492 tRNA CLI_0492 NC_009699.1 501788 501865 D tRNA-Ala 501788..501865 Clostridium botulinum F str. Langeland 5404290 CLI_0491 tRNA CLI_0491 NC_009699.1 501789 501864 D tRNA-Ala 501789..501864 Clostridium botulinum F str. Langeland 5402963 CLI_0493 tRNA CLI_0493 NC_009699.1 501870 501946 D tRNA-Ile 501870..501946 Clostridium botulinum F str. Langeland 5404703 CLI_0499 tRNA CLI_0499 NC_009699.1 505236 505312 D tRNA-Asn 505236..505312 Clostridium botulinum F str. Langeland 5403075 CLI_0498 tRNA CLI_0498 NC_009699.1 505237 505311 D tRNA-Asn 505237..505311 Clostridium botulinum F str. Langeland 5403776 CLI_0562 tRNA CLI_0562 NC_009699.1 580277 580351 D tRNA-Glu 580277..580351 Clostridium botulinum F str. Langeland 5402001 CLI_3027 tRNA CLI_3027 NC_009699.1 3208314 3208410 R tRNA-Sec complement(3208314..3208410) Clostridium botulinum F str. Langeland 5404219 CLI_3028 tRNA CLI_3028 NC_009699.1 3208319 3208409 R tRNA-Sec complement(3208319..3208409) Clostridium botulinum F str. Langeland 5404902 CLI_3065 tRNA CLI_3065 NC_009699.1 3242884 3242968 R tRNA-Leu complement(3242884..3242968) Clostridium botulinum F str. Langeland 5401924 CLI_3103 tRNA CLI_3103 NC_009699.1 3273404 3273492 R tRNA-Leu complement(3273404..3273492) Clostridium botulinum F str. Langeland 5402115 CLI_3104 tRNA CLI_3104 NC_009699.1 3273405 3273491 R tRNA-Leu complement(3273405..3273491) Clostridium botulinum F str. Langeland 5403778 CLI_3201 tRNA CLI_3201 NC_009699.1 3387097 3387170 R tRNA-Cys complement(3387097..3387170) Clostridium botulinum F str. Langeland 5402763 CLI_3202 tRNA CLI_3202 NC_009699.1 3387180 3387254 R tRNA-Gly complement(3387180..3387254) Clostridium botulinum F str. Langeland 5404767 CLI_3203 tRNA CLI_3203 NC_009699.1 3387258 3387335 R tRNA-Phe complement(3387258..3387335) Clostridium botulinum F str. Langeland 5401978 CLI_3204 tRNA CLI_3204 NC_009699.1 3387259 3387334 R tRNA-Phe complement(3387259..3387334) Clostridium botulinum F str. Langeland 5402379 CLI_3205 tRNA CLI_3205 NC_009699.1 3387337 3387415 R tRNA-Asp complement(3387337..3387415) Clostridium botulinum F str. Langeland 5402305 CLI_3206 tRNA CLI_3206 NC_009699.1 3387338 3387414 R tRNA-Asp complement(3387338..3387414) Clostridium botulinum F str. Langeland 5404762 CLI_3207 tRNA CLI_3207 NC_009699.1 3387420 3387495 R tRNA-Val complement(3387420..3387495) Clostridium botulinum F str. Langeland 5404626 CLI_3396 tRNA CLI_3396 NC_009699.1 3556046 3556122 R tRNA-Arg complement(3556046..3556122) Clostridium botulinum F str. Langeland 5404655 CLI_3397 tRNA CLI_3397 NC_009699.1 3556148 3556221 R tRNA-Gly complement(3556148..3556221) Clostridium botulinum F str. Langeland 5404904 CLI_3398 tRNA CLI_3398 NC_009699.1 3556250 3556327 R tRNA-Pro complement(3556250..3556327) Clostridium botulinum F str. Langeland 5404764 CLI_3399 tRNA CLI_3399 NC_009699.1 3556251 3556326 R tRNA-Pro complement(3556251..3556326) Clostridium botulinum F str. Langeland 5404285 CLI_3400 tRNA CLI_3400 NC_009699.1 3556353 3556428 R tRNA-Lys complement(3556353..3556428) Clostridium botulinum F str. Langeland 5402394 CLI_3401 tRNA CLI_3401 NC_009699.1 3556433 3556511 R tRNA-Arg complement(3556433..3556511) Clostridium botulinum F str. Langeland 5403941 CLI_3402 tRNA CLI_3402 NC_009699.1 3556434 3556510 R tRNA-Arg complement(3556434..3556510) Clostridium botulinum F str. Langeland 5404706 CLI_3403 tRNA CLI_3403 NC_009699.1 3556517 3556590 R tRNA-Gly complement(3556517..3556590) Clostridium botulinum F str. Langeland 5403353 CLI_3404 tRNA CLI_3404 NC_009699.1 3556599 3556673 R tRNA-Gly complement(3556599..3556673) Clostridium botulinum F str. Langeland 5402187 CLI_3405 tRNA CLI_3405 NC_009699.1 3556739 3556824 R tRNA-Leu complement(3556739..3556824) Clostridium botulinum F str. Langeland 5403352 CLI_3406 tRNA CLI_3406 NC_009699.1 3556740 3556823 R tRNA-Leu complement(3556740..3556823) Clostridium botulinum F str. Langeland 5403079 CLI_3407 tRNA CLI_3407 NC_009699.1 3556838 3556915 R tRNA-Lys complement(3556838..3556915) Clostridium botulinum F str. Langeland 5404463 CLI_3408 tRNA CLI_3408 NC_009699.1 3556839 3556914 R tRNA-Lys complement(3556839..3556914) Clostridium botulinum F str. Langeland 5403615 CLI_3409 tRNA CLI_3409 NC_009699.1 3556917 3556993 R tRNA-Gln complement(3556917..3556993) Clostridium botulinum F str. Langeland 5404702 CLI_3410 tRNA CLI_3410 NC_009699.1 3556918 3556992 R tRNA-Gln complement(3556918..3556992) Clostridium botulinum F str. Langeland 5405136 CLI_3411 tRNA CLI_3411 NC_009699.1 3556996 3557073 R tRNA-His complement(3556996..3557073) Clostridium botulinum F str. Langeland 5404769 CLI_3412 tRNA CLI_3412 NC_009699.1 3556997 3557072 R tRNA-His complement(3556997..3557072) Clostridium botulinum F str. Langeland 5403294 CLI_3413 tRNA CLI_3413 NC_009699.1 3557088 3557163 R tRNA-Lys complement(3557088..3557163) Clostridium botulinum F str. Langeland 5402961 CLI_3414 tRNA CLI_3414 NC_009699.1 3557168 3557246 R tRNA-Arg complement(3557168..3557246) Clostridium botulinum F str. Langeland 5402577 CLI_3415 tRNA CLI_3415 NC_009699.1 3557169 3557245 R tRNA-Arg complement(3557169..3557245) Clostridium botulinum F str. Langeland 5404861 CLI_3416 tRNA CLI_3416 NC_009699.1 3557252 3557325 R tRNA-Gly complement(3557252..3557325) Clostridium botulinum F str. Langeland 5403942 CLI_3417 tRNA CLI_3417 NC_009699.1 3557334 3557408 R tRNA-Gly complement(3557334..3557408) Clostridium botulinum F str. Langeland 5405441 CLI_3418 tRNA CLI_3418 NC_009699.1 3557475 3557560 R tRNA-Leu complement(3557475..3557560) Clostridium botulinum F str. Langeland 5404863 CLI_3419 tRNA CLI_3419 NC_009699.1 3557476 3557559 R tRNA-Leu complement(3557476..3557559) Clostridium botulinum F str. Langeland 5402487 CLI_3420 tRNA CLI_3420 NC_009699.1 3557574 3557651 R tRNA-Lys complement(3557574..3557651) Clostridium botulinum F str. Langeland 5404860 CLI_3421 tRNA CLI_3421 NC_009699.1 3557575 3557650 R tRNA-Lys complement(3557575..3557650) Clostridium botulinum F str. Langeland 5405134 CLI_3422 tRNA CLI_3422 NC_009699.1 3557653 3557729 R tRNA-Gln complement(3557653..3557729) Clostridium botulinum F str. Langeland 5402489 CLI_3423 tRNA CLI_3423 NC_009699.1 3557654 3557728 R tRNA-Gln complement(3557654..3557728) Clostridium botulinum F str. Langeland 5402391 CLI_3424 tRNA CLI_3424 NC_009699.1 3557732 3557809 R tRNA-His complement(3557732..3557809) Clostridium botulinum F str. Langeland 5404862 CLI_3425 tRNA CLI_3425 NC_009699.1 3557733 3557808 R tRNA-His complement(3557733..3557808) Clostridium botulinum F str. Langeland 5402393 CLI_3426 tRNA CLI_3426 NC_009699.1 3557815 3557893 R tRNA-Arg complement(3557815..3557893) Clostridium botulinum F str. Langeland 5405440 CLI_3427 tRNA CLI_3427 NC_009699.1 3557816 3557892 R tRNA-Arg complement(3557816..3557892) Clostridium botulinum F str. Langeland 5405133 CLI_3428 tRNA CLI_3428 NC_009699.1 3557899 3557972 R tRNA-Gly complement(3557899..3557972) Clostridium botulinum F str. Langeland 5403296 CLI_3429 tRNA CLI_3429 NC_009699.1 3557979 3558056 R tRNA-Pro complement(3557979..3558056) Clostridium botulinum F str. Langeland 5402761 CLI_3430 tRNA CLI_3430 NC_009699.1 3557980 3558055 R tRNA-Pro complement(3557980..3558055) Clostridium botulinum F str. Langeland 5403728 CLI_3487 tRNA CLI_3487 NC_009699.1 3629335 3629412 R tRNA-Trp complement(3629335..3629412) Clostridium botulinum F str. Langeland 5402538 CLI_3488 tRNA CLI_3488 NC_009699.1 3629336 3629411 R tRNA-Trp complement(3629336..3629411) Clostridium botulinum F str. Langeland 5402578 CLI_3680 tRNA CLI_3680 NC_009699.1 3827939 3828014 R tRNA-Thr complement(3827939..3828014) Clostridium botulinum F str. Langeland 5404191 CLI_3681 tRNA CLI_3681 NC_009699.1 3828032 3828108 R tRNA-Gly complement(3828032..3828108) Clostridium botulinum F str. Langeland 5402306 CLI_3682 tRNA CLI_3682 NC_009699.1 3828033 3828107 R tRNA-Gly complement(3828033..3828107) Clostridium botulinum F str. Langeland 5403084 CLI_3702 tRNA CLI_3702 NC_009699.1 3848783 3848859 R tRNA-Asn complement(3848783..3848859) Clostridium botulinum F str. Langeland 5404136 CLI_3703 tRNA CLI_3703 NC_009699.1 3848784 3848858 R tRNA-Asn complement(3848784..3848858) Clostridium botulinum F str. Langeland 5404466 CLI_3704 tRNA CLI_3704 NC_009699.1 3848885 3848961 R tRNA-Asn complement(3848885..3848961) Clostridium botulinum F str. Langeland 5402395 CLI_3705 tRNA CLI_3705 NC_009699.1 3848886 3848960 R tRNA-Asn complement(3848886..3848960) Clostridium botulinum F str. Langeland 5404765 CLI_3710 tRNA CLI_3710 NC_009699.1 3852153 3852229 R tRNA-Ile complement(3852153..3852229) Clostridium botulinum F str. Langeland 5404289 CLI_3713 tRNA CLI_3713 NC_009699.1 3854043 3854120 R tRNA-Ala complement(3854043..3854120) Clostridium botulinum F str. Langeland 5403073 CLI_3714 tRNA CLI_3714 NC_009699.1 3854044 3854119 R tRNA-Ala complement(3854044..3854119) Clostridium botulinum F str. Langeland 5404705 CLI_t03 tRNA CLI_t03 NC_009699.1 3854123 3854199 R tRNA-Met complement(3854123..3854199) Clostridium botulinum F str. Langeland 5548026 CLI_3737 tRNA CLI_3737 NC_009699.1 3877018 3877096 R tRNA-Met complement(3877018..3877096) Clostridium botulinum F str. Langeland 5403870 CLI_3738 tRNA CLI_3738 NC_009699.1 3877019 3877095 R tRNA-Met complement(3877019..3877095) Clostridium botulinum F str. Langeland 5403351 CLI_3739 tRNA CLI_3739 NC_009699.1 3877105 3877182 R tRNA-Met complement(3877105..3877182) Clostridium botulinum F str. Langeland 5404286 CLI_3740 tRNA CLI_3740 NC_009699.1 3877234 3877311 R tRNA-Met complement(3877234..3877311) Clostridium botulinum F str. Langeland 5402380 CLI_3741 tRNA CLI_3741 NC_009699.1 3877314 3877404 R tRNA-Leu complement(3877314..3877404) Clostridium botulinum F str. Langeland 5404628 CLI_3742 tRNA CLI_3742 NC_009699.1 3877315 3877403 R tRNA-Leu complement(3877315..3877403) Clostridium botulinum F str. Langeland 5404901 CLI_3743 tRNA CLI_3743 NC_009699.1 3877434 3877512 R tRNA-Met complement(3877434..3877512) Clostridium botulinum F str. Langeland 5404465 CLI_3744 tRNA CLI_3744 NC_009699.1 3877435 3877511 R tRNA-Met complement(3877435..3877511) Clostridium botulinum F str. Langeland 5405439 CLI_3745 tRNA CLI_3745 NC_009699.1 3877515 3877592 R tRNA-Met complement(3877515..3877592) Clostridium botulinum F str. Langeland 5404761 CLI_3746 tRNA CLI_3746 NC_009699.1 3877516 3877591 R tRNA-Met complement(3877516..3877591) Clostridium botulinum F str. Langeland 5403081 CLI_3747 tRNA CLI_3747 NC_009699.1 3877595 3877685 R tRNA-Leu complement(3877595..3877685) Clostridium botulinum F str. Langeland 5403943 CLI_3748 tRNA CLI_3748 NC_009699.1 3877596 3877684 R tRNA-Leu complement(3877596..3877684) Clostridium botulinum F str. Langeland 5404766 CLI_3771 tRNA CLI_3771 NC_009699.1 3898613 3898690 D tRNA-Pro 3898613..3898690 Clostridium botulinum F str. Langeland 5401946 CLI_3770 tRNA CLI_3770 NC_009699.1 3898614 3898689 D tRNA-Pro 3898614..3898689 Clostridium botulinum F str. Langeland 5401974 CLI_3846 tRNA CLI_3846 NC_009699.1 3961121 3961198 R tRNA-Val complement(3961121..3961198) Clostridium botulinum F str. Langeland 5402542 CLI_3847 tRNA CLI_3847 NC_009699.1 3961122 3961197 R tRNA-Val complement(3961122..3961197) Clostridium botulinum F str. Langeland 5404903 CLI_3848 tRNA CLI_3848 NC_009699.1 3961215 3961291 R tRNA-Glu complement(3961215..3961291) Clostridium botulinum F str. Langeland 5402962 CLI_3849 tRNA CLI_3849 NC_009699.1 3961216 3961290 R tRNA-Glu complement(3961216..3961290) Clostridium botulinum F str. Langeland 5404864 CLI_3850 tRNA CLI_3850 NC_009699.1 3961296 3961371 R tRNA-Thr complement(3961296..3961371) Clostridium botulinum F str. Langeland 5403293 CLI_3851 tRNA CLI_3851 NC_009699.1 3961375 3961453 R tRNA-Asp complement(3961375..3961453) Clostridium botulinum F str. Langeland 5403614 CLI_3852 tRNA CLI_3852 NC_009699.1 3961376 3961452 R tRNA-Asp complement(3961376..3961452) Clostridium botulinum F str. Langeland 5403354 CLI_3853 tRNA CLI_3853 NC_009699.1 3961461 3961538 R tRNA-Val complement(3961461..3961538) Clostridium botulinum F str. Langeland 5404768 CLI_3854 tRNA CLI_3854 NC_009699.1 3961462 3961537 R tRNA-Val complement(3961462..3961537) Clostridium botulinum F str. Langeland 5403082 CLI_3855 tRNA CLI_3855 NC_009699.1 3961555 3961629 R tRNA-Glu complement(3961555..3961629) Clostridium botulinum F str. Langeland 5403729 CLI_0009 rRNA rrsA NC_009699.1 9253 10754 D 16S ribosomal RNA 9253..10754 Clostridium botulinum F str. Langeland 5402200 CLI_0012 rRNA rrlA NC_009699.1 10912 13813 D 23S ribosomal RNA 10912..13813 Clostridium botulinum F str. Langeland 5404345 CLI_0013 rRNA rrfA NC_009699.1 13907 14023 D 5S ribosomal RNA 13907..14023 Clostridium botulinum F str. Langeland 5405137 CLI_0060 rRNA rrsB NC_009699.1 43810 45311 D 16S ribosomal RNA 43810..45311 Clostridium botulinum F str. Langeland 5402549 CLI_0063 rRNA rrlB NC_009699.1 45533 48434 D 23S ribosomal RNA 45533..48434 Clostridium botulinum F str. Langeland 5402383 CLI_0064 rRNA rrfB NC_009699.1 48486 48602 D 5S ribosomal RNA 48486..48602 Clostridium botulinum F str. Langeland 5405264 CLI_0068 rRNA rrsC NC_009699.1 50328 51829 D 16S ribosomal RNA 50328..51829 Clostridium botulinum F str. Langeland 5402760 CLI_0071 rRNA rrlI-1 NC_009699.1 51987 54889 D 23S ribosomal RNA 51987..54889 Clostridium botulinum F str. Langeland 5403937 CLI_0072 rRNA rrfC NC_009699.1 54940 55056 D 5S ribosomal RNA 54940..55056 Clostridium botulinum F str. Langeland 5402288 CLI_0077 rRNA rrsD NC_009699.1 58128 59629 D 16S ribosomal RNA 58128..59629 Clostridium botulinum F str. Langeland 5405068 CLI_0080 rRNA rrlD NC_009699.1 59851 62752 D 23S ribosomal RNA 59851..62752 Clostridium botulinum F str. Langeland 5405563 CLI_0081 rRNA rrfD NC_009699.1 62804 62920 D 5S ribosomal RNA 62804..62920 Clostridium botulinum F str. Langeland 5402290 CLI_0089 rRNA rrsE NC_009699.1 65133 66634 D 16S ribosomal RNA 65133..66634 Clostridium botulinum F str. Langeland 5404089 CLI_0092 rRNA rrlE NC_009699.1 66792 69692 D 23S ribosomal RNA 66792..69692 Clostridium botulinum F str. Langeland 5405015 CLI_0093 rRNA rrfE NC_009699.1 69743 69859 D 5S ribosomal RNA 69743..69859 Clostridium botulinum F str. Langeland 5403076 CLI_0098 rRNA rrsF NC_009699.1 71347 72848 D 16S ribosomal RNA 71347..72848 Clostridium botulinum F str. Langeland 5404291 CLI_0101 rRNA rrlH-1 NC_009699.1 73006 75906 D 23S ribosomal RNA 73006..75906 Clostridium botulinum F str. Langeland 5402257 CLI_0102 rRNA rrfF NC_009699.1 75957 76073 D 5S ribosomal RNA 75957..76073 Clostridium botulinum F str. Langeland 5403072 CLI_0490 rRNA rrsG NC_009699.1 500144 501645 D 16S ribosomal RNA 500144..501645 Clostridium botulinum F str. Langeland 5403532 CLI_0496 rRNA rrlG NC_009699.1 502080 504981 D 23S ribosomal RNA 502080..504981 Clostridium botulinum F str. Langeland 5405442 CLI_0497 rRNA rrfG NC_009699.1 505112 505228 D 5S ribosomal RNA 505112..505228 Clostridium botulinum F str. Langeland 5405266 CLI_3706 rRNA rrfH NC_009699.1 3848969 3849085 R 5S ribosomal RNA complement(3848969..3849085) Clostridium botulinum F str. Langeland 5404464 CLI_3707 rRNA rrlH-2 NC_009699.1 3849177 3852077 R 23S ribosomal RNA complement(3849177..3852077) Clostridium botulinum F str. Langeland 5402292 CLI_3711 rRNA rrsH NC_009699.1 3852316 3853817 R 16S ribosomal RNA complement(3852316..3853817) Clostridium botulinum F str. Langeland 5403083 CLI_3718 rRNA rrfI NC_009699.1 3854207 3854323 R 5S ribosomal RNA complement(3854207..3854323) Clostridium botulinum F str. Langeland 5404763 CLI_3719 rRNA rrlI-2 NC_009699.1 3854414 3857315 R 23S ribosomal RNA complement(3854414..3857315) Clostridium botulinum F str. Langeland 5404264 CLI_3722 rRNA rrsI NC_009699.1 3857537 3859038 R 16S ribosomal RNA complement(3857537..3859038) Clostridium botulinum F str. Langeland 5404288