-- dump date   	20140619_043758
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_002504369.1	binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.
YP_002504370.1	binds the polymerase to DNA and acts as a sliding clamp
YP_002504371.1	PFAM: RNA-binding S4 domain protein; KEGG: cpr:CPR_0003 S4 domain-containing protein
YP_002504372.1	TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; KEGG: cth:Cthe_2374 DNA replication and repair protein RecF
YP_002504373.1	KEGG: cth:Cthe_2375 hypothetical protein
YP_002504374.1	KEGG: cth:Cthe_2376 DNA gyrase subunit B; TIGRFAM: DNA gyrase subunit beta; PFAM: DNA gyrase subunit B domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA topoisomerase type IIsubunit alpha B region 2 domain protein; SMART: DNA topoisomerase II
YP_002504375.1	PFAM: cobyrinic acid ac-diamide synthase; KEGG: cth:Cthe_2377 chromosome segregation ATPase
YP_002504376.1	TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: cth:Cthe_2378 chromosome segregation DNA-binding protein
YP_002504377.1	KEGG: cth:Cthe_2379 hypothetical protein
YP_002504378.1	KEGG: cth:Cthe_2380 hypothetical protein
YP_002504379.1	TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: ctc:CTC01356 CDP-diacylglycerol--serine O-phosphatidyltransferase
YP_002504380.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase; KEGG: tpd:Teth39_0448 HAD family hydrolase
YP_002504381.1	KEGG: cth:Cthe_2385 hypothetical protein
YP_002504382.1	KEGG: cth:Cthe_2388 hypothetical protein
YP_002504383.1	PFAM: sigmaK-factor processing regulatory BofA; KEGG: ckl:CKL_3823 hypothetical protein
YP_002504384.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; 4Fe-4S ferredoxin iron-sulphur binding, conserved site; KEGG: cpy:Cphy_3558 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
YP_002504385.1	TIGRFAM: spore coat protein, CotS family; KEGG: cth:Cthe_2398  spore coat protein
YP_002504386.1	PFAM: formate-tetrahydrofolate ligase FTHFS; KEGG: cth:Cthe_2399 formate-tetrahydrofolate ligase
YP_002504387.1	KEGG: cbt:CLH_0458 sporulation peptidase YabG
YP_002504388.1	PFAM: protein of unknown function DUF1021; KEGG: cth:Cthe_2401 hypothetical protein
YP_002504389.1	PFAM: peptidoglycan-binding LysM; KEGG: cth:Cthe_2402 peptidoglycan-binding LysM
YP_002504390.1	An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis
YP_002504391.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: cth:Cthe_2404 GntR family transcriptional regulator
YP_002504392.1	PFAM: ATPase AAA; SMART: AAA ATPase; KEGG: cth:Cthe_2407 ATPase AAA, central region
YP_002504393.1	PFAM: PspA/IM30 family protein; KEGG: cth:Cthe_2408 phage shock protein A, PspA
YP_002504394.1	PFAM: GCN5-related N-acetyltransferase; KEGG: ckl:CKL_2298 acetyltransferase
YP_002504395.1	KEGG: cth:Cthe_2409 hypothetical protein
YP_002504396.1	PFAM: protein of unknown function DUF342; KEGG: cth:Cthe_2410 hypothetical protein
YP_002504397.1	KEGG: hau:Haur_4114 multi-sensor signal transduction histidine kinase
YP_002504398.1	TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase; KEGG: cno:NT01CX_1261 4'-phosphopantetheinyl transferase
YP_002504399.1	PFAM: metallophosphoesterase; KEGG: cth:Cthe_2411 metallophosphoesterase
YP_002504400.1	KEGG: cth:Cthe_2412 SMC protein-like protein
YP_002504401.1	PFAM: NLP/P60 protein; SH3 type 3 domain protein; KEGG: cth:Cthe_2413 NLP/P60
YP_002504402.1	PFAM: glycosyltransferase 28 domain; monogalactosyldiacylglycerol synthase; KEGG: cbl:CLK_3302 hypothetical protein
YP_002504403.1	TIGRFAM: spore cortex-lytic enzyme; PFAM: peptidoglycan-binding protein; cell wall hydrolase SleB; KEGG: cth:Cthe_2415 cell wall hydrolase, SleB
YP_002504404.1	TIGRFAM: germination protein YpeB; PFAM: propeptide PepSY amd peptidase M4; KEGG: cth:Cthe_2416 peptidase
YP_002504405.1	PFAM: regulatory protein MarR; KEGG: cac:CAC0197 MarR family transcriptional regulator
YP_002504406.1	TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; KEGG: cbf:CLI_2343 peptide deformylase
YP_002504407.1	PFAM: S-layer domain protein; KEGG: cth:Cthe_2877 S-layer-like domain-containing protein
YP_002504408.1	PFAM: hypothetical protein; KEGG: cth:Cthe_2417 abortive infection protein
YP_002504409.1	acts to load the DnaB helicase onto the initiation site during DNA replication
YP_002504410.1	TIGRFAM: primosome, DnaD subunit; PFAM: DnaD and phage-associated region; KEGG: cth:Cthe_2419 DNA replication protein DnaD
YP_002504411.1	PFAM: ferritin; KEGG: csc:Csac_2712 ferritin, Dps family protein
YP_002504412.1	PFAM: extracellular solute-binding protein family 5; KEGG: cth:Cthe_2961 extracellular solute-binding protein
YP_002504413.1	KEGG: cth:Cthe_2962 oligopeptide/dipeptide ABC transporter ATPase; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA
YP_002504414.1	KEGG: cth:Cthe_2963 oligopeptide/dipeptide ABC transporter ATPase; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA
YP_002504415.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: cth:Cthe_2964 binding-protein-dependent transport systems inner membrane component
YP_002504416.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: cth:Cthe_2965 binding-protein-dependent transport systems inner membrane component
YP_002504417.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: dsy:DSY4790 hypothetical protein
YP_002504418.1	PFAM: diacylglycerol kinase; KEGG: aoe:Clos_2864 diacylglycerol kinase
YP_002504419.1	TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; KEGG: ctc:CTC00578 exonuclease SbcD
YP_002504420.1	PFAM: SMC domain protein; KEGG: ctc:CTC00579 exonuclease SbcC
YP_002504421.1	KEGG: cth:Cthe_2191 1,4-alpha-glucan branching enzyme; TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain
YP_002504422.1	KEGG: tte:TTE0289 periplasmic sugar-binding proteins
YP_002504423.1	PFAM: ribosomal protein S6; KEGG: cth:Cthe_2187 SSU ribosomal protein S6P
YP_002504424.1	TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: cth:Cthe_2186 single-strand binding protein
YP_002504425.1	binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit
YP_002504426.1	PFAM: hypothetical protein; KEGG: ckl:CKL_2928 transcriptional regulator
YP_002504429.1	PFAM: transposase IS200-family protein; KEGG: cac:CAC3531 IS605/IS200-like transposase
YP_002504430.1	KEGG: shl:Shal_0525 hypothetical protein
YP_002504432.1	KEGG: chu:CHU_0039 hypothetical protein
YP_002504433.1	PFAM: SMC domain protein; KEGG: sun:SUN_0732 hypothetical protein
YP_002504434.1	PFAM: helicase; type III restriction protein res subunit; DEAD/DEAH box helicase; SMART: DEAD-like helicases; KEGG: nwi:Nwi_2131 DEAD/DEAH box helicase
YP_002504435.1	PFAM: integrase family protein; KEGG: cbl:CLK_1309 site-specific recombinase
YP_002504436.1	PFAM: integrase family protein; KEGG: amt:Amet_1594 phage integrase family protein
YP_002504437.1	PFAM: integrase family protein; KEGG: amt:Amet_1595 phage integrase family protein
YP_002504438.1	KEGG: cyt:cce_4564 hypothetical protein
YP_002504439.1	PFAM: SEC-C motif domain protein; KEGG: cth:Cthe_1113 SecC motif-containing protein
YP_002504440.1	KEGG: abm:ABSDF3536 hypothetical protein
YP_002504442.1	KEGG: hch:HCH_04427 hypothetical protein
YP_002504443.1	binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit
YP_002504444.1	KEGG: gme:Gmet_2951 hypothetical protein
YP_002504445.1	KEGG: fno:Fnod_0976 glycine cleavage system aminomethyltransferase T
YP_002504446.1	PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; KEGG: cth:Cthe_2260 prephenate dehydratase
YP_002504447.1	KEGG: cth:Cthe_2259 hypothetical protein
YP_002504448.1	PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: cth:Cthe_2258 phosphoesterase, RecJ-like protein
YP_002504449.1	in Escherichia coli this protein is wrapped around the base of the L1 stalk
YP_002504450.1	TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase; KEGG: cth:Cthe_2256 primary replicative DNA helicase
YP_002504451.1	TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; KEGG: cth:Cthe_2255 tRNA(Ile)-lysidine synthetase
YP_002504452.1	TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: cth:Cthe_2254 hypoxanthine phosphoribosyltransferase
YP_002504453.1	KEGG: cth:Cthe_2253 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA
YP_002504454.1	KEGG: drm:Dred_0128 hypothetical protein
YP_002504455.1	PFAM: S-adenosylmethionine synthetase; KEGG: cth:Cthe_2251 methionine adenosyltransferase
YP_002504456.1	KEGG: cth:Cthe_2250 hypothetical protein
YP_002504457.1	KEGG: tte:TTE0489 exonuclease V subunit alpha
YP_002504458.1	PFAM: phosphoribosyltransferase; KEGG: cth:Cthe_2248 phosphoribosyltransferase
YP_002504459.1	KEGG: cth:Cthe_2247 regulatory protein, MerR
YP_002504460.1	PFAM: anti-sigma-28 factor FlgM family protein; KEGG: cth:Cthe_2246 anti-sigma-28 factor, FlgM
YP_002504461.1	PFAM: FlgN family protein; KEGG: cth:Cthe_2245 hypothetical protein
YP_002504462.1	TIGRFAM: flagellar hook-associated protein FlgK; PFAM: von Willebrand factor type A; protein of unknown function DUF1078 domain protein; KEGG: cth:Cthe_2244 flagellar hook-associated protein FlgK
YP_002504463.1	TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: cth:Cthe_2243 flagellar hook-associated protein FlgK
YP_002504464.1	with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook
YP_002504465.1	KEGG: cth:Cthe_2241 hypothetical protein
YP_002504466.1	binds to flagellin and appears to stabilize flagellin during flagella assembly
YP_002504467.1	PFAM: carbon storage regulator; KEGG: lbf:LBF_3098 carbon storage regulator protein A
YP_002504468.1	PFAM: flagellin domain protein; KEGG: esi:Exig_2443 flagellin domain-containing protein
YP_002504469.1	PFAM: flagellin domain protein; KEGG: gka:GK3131 flagellin protein
YP_002504470.1	PFAM: flagellin domain protein; KEGG: gka:GK3131 flagellin protein
YP_002504471.1	KEGG: aoe:Clos_2508 hypothetical protein
YP_002504472.1	PFAM: flagellar protein FlaG protein; KEGG: cth:Cthe_2219 flagellar protein FlaG protein
YP_002504473.1	PFAM: flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain protein; KEGG: cth:Cthe_2218 flagellar hook-associated 2-like protein
YP_002504474.1	PFAM: flagellar protein FliS; KEGG: cth:Cthe_2217 flagellar protein FliS
YP_002504475.1	PFAM: FlgN family protein; KEGG: cth:Cthe_2216 hypothetical protein
YP_002504476.1	PFAM: Kelch repeat-containing protein; Kelch repeat protein; KEGG: LOC100082187; similar to kelch-like 5 (Drosophila) ; K10442 kelch-like protein 1/4/5
YP_002504477.1	KEGG: cth:Cthe_2214 hypothetical protein
YP_002504478.1	PFAM: radical SAM protein; KEGG: tex:Teth514_1289 radical SAM domain-containing protein
YP_002504479.1	PFAM: tyrosine protein kinase; serine/threonine protein kinase-related; SMART: serine/threonine protein kinase; KEGG: cac:CAC0404 TPR repeat-containing serine/threonin protein kinase
YP_002504480.1	PFAM: SAF domain protein; KEGG: cac:CAC1974 hypothetical protein
YP_002504481.1	KEGG: rde:RD1_3835 chain length determinant domain protein
YP_002504482.1	PFAM: type II secretion system protein E; KEGG: cbl:CLK_A0282 hypothetical protein
YP_002504483.1	KEGG: tfu:Tfu_2275  integral membrane protein
YP_002504490.1	PFAM: radical SAM protein; KEGG: cbk:CLL_A1020 radical SAM
YP_002504491.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: amt:Amet_3372 ABC transporter
YP_002504492.1	PFAM: helicase; type III restriction protein res subunit; DEAD/DEAH box helicase; SMART: DEAD-like helicases; KEGG: ctc:CTC01856 ATP-dependent RNA helicase
YP_002504493.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; Cupin 2 conserved barrel domain protein; KEGG: cth:Cthe_2212 AraC family transcriptional regulator
YP_002504494.1	catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis
YP_002504495.1	catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis
YP_002504496.1	TIGRFAM: 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: cth:Cthe_2209 3-isopropylmalate dehydrogenase
YP_002504497.1	PFAM: protein of unknown function DUF6 transmembrane; protein of unknown function DUF250; KEGG: hmo:HM1_1018 integral membrane protein duf6
YP_002504498.1	KEGG: cth:Cthe_2206 hypothetical protein
YP_002504499.1	TIGRFAM: cyanophycinase; PFAM: peptidase S51 dipeptidase E; KEGG: cth:Cthe_2205 cyanophycinase
YP_002504500.1	catalyze the formation of cyanophycin which may act to store excess nitrogen
YP_002504501.1	KEGG: cth:Cthe_2584 hypothetical protein
YP_002504502.1	TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; hypothetical protein; KEGG: cth:Cthe_2585 biotin--acetyl-CoA-carboxylase ligase
YP_002504503.1	KEGG: cth:Cthe_2587 hypothetical protein
YP_002504504.1	type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP
YP_002504505.1	TIGRFAM: L-lactate dehydrogenase; PFAM: lactate/malate dehydrogenase; KEGG: cth:Cthe_0345 malate dehydrogenase (NAD)
YP_002504506.1	PFAM: malic protein domain protein; malic protein NAD-binding; KEGG: cth:Cthe_0344 malate dehydrogenase
YP_002504507.1	PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: mta:Moth_0429 mannitol dehydrogenase
YP_002504508.1	catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate
YP_002504509.1	PFAM: glycoside hydrolase family 67; glycosyl hydrolase 67 C-teriminal domain protein; glycosyl hydrolase 67 middle domain protein; KEGG: gtn:GTNG_1770 alpha-glucuronidase
YP_002504510.1	PFAM: helix-turn-helix- domain containing protein AraC type; histidine kinase HAMP region domain protein; KEGG: cpy:Cphy_1915 AraC family transcriptional regulator
YP_002504511.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: cpy:Cphy_1916 binding-protein-dependent transport systems inner membrane component
YP_002504512.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bpu:BPUM_2666 ABC transporter ATP-binding protein
YP_002504513.1	PFAM: extracellular solute-binding protein family 1; KEGG: cpy:Cphy_1918 extracellular solute-binding protein
YP_002504514.1	PFAM: polysaccharide deacetylase; KEGG: pmo:Pmob_0232 polysaccharide deacetylase
YP_002504515.1	PFAM: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: bha:BH2109 hypothetical protein
YP_002504516.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase internal region; KEGG: csc:Csac_2691 integral membrane sensor signal transduction histidine kinase
YP_002504517.1	PFAM: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: bha:BH2109 hypothetical protein
YP_002504518.1	PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH2111 hypothetical protein
YP_002504519.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: cpy:Cphy_3209 binding-protein-dependent transport systems inner membrane component
YP_002504520.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: cpy:Cphy_3208 binding-protein-dependent transport systems inner membrane component
YP_002504521.1	PFAM: glycoside hydrolase family 10; KEGG: csc:Csac_0204 glycoside hydrolase family protein
YP_002504522.1	PFAM: glycoside hydrolase family 42 domain 5 loop region; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 ; glycoside hydrolase family 2 sugar binding; KEGG: cpr:CPR_0750 beta-galactosidase
YP_002504523.1	PFAM: Orn/Lys/Arg decarboxylase major region; aromatic amino acid beta-eliminating lyase/threonine aldolase; Orn/Lys/Arg decarboxylase domain protein; KEGG: cth:Cthe_2108 arginine decarboxylase
YP_002504524.1	PFAM: thymidylate kinase; KEGG: aoe:Clos_0060 dTMP kinase
YP_002504525.1	PFAM: protein of unknown function DUF970; KEGG: tte:TTE0095 hypothetical protein
YP_002504526.1	PFAM: protein of unknown function DUF327; KEGG: cth:Cthe_2106 hypothetical protein
YP_002504527.1	KEGG: cth:Cthe_2105 DNA polymerase III delta prime subunit
YP_002504528.1	PFAM: PSP1 domain protein; KEGG: cth:Cthe_2104 PSP1
YP_002504529.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cth:Cthe_2103 4Fe-4S ferredoxin iron-sulfur binding
YP_002504530.1	PFAM: methyltransferase small; methyltransferase type 11; KEGG: cth:Cthe_2102 methyltransferase small
YP_002504531.1	PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: cth:Cthe_2101 hypothetical protein
YP_002504532.1	TIGRFAM: AbrB family transcriptional regulator; PFAM: SpoVT/AbrB domain protein; KEGG: cth:Cthe_2100 AbrB family transcriptional regulator
YP_002504533.1	PFAM: nucleoside recognition domain protein; KEGG: cth:Cthe_2099 nucleoside recognition
YP_002504534.1	PFAM: nucleoside recognition domain protein; KEGG: cth:Cthe_2098 nucleoside recognition
YP_002504535.1	KEGG: dsy:DSY2213 hypothetical protein
YP_002504536.1	TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: cth:Cthe_2095 TatD family hydrolase
YP_002504537.1	KEGG: viral A-type inclusion protein,  ; K02331 DNA polymerase phi subunit
YP_002504538.1	PFAM: protein of unknown function DUF348; 3D domain protein; G5 domain protein; KEGG: cth:Cthe_2093 hypothetical protein
YP_002504539.1	TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; KEGG: cth:Cthe_2092 dimethyladenosine transferase
YP_002504540.1	KEGG: cth:Cthe_2091 hypothetical protein
YP_002504541.1	TIGRFAM: hemerythrin-like metal-binding protein; PFAM: hemerythrin HHE cation binding domain protein; KEGG: gsu:GSU2929 hypothetical protein
YP_002504542.1	PFAM: protein of unknown function DUF710; KEGG: cth:Cthe_2088 hypothetical protein
YP_002504543.1	PFAM: metalloenzyme domain protein; KEGG: cth:Cthe_2087 metalloenzyme
YP_002504544.1	PFAM: peptidase U32; KEGG: cth:Cthe_2086 peptidase U32
YP_002504545.1	TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase; KEGG: cth:Cthe_2085 deoxyuridine 5'-triphosphate nucleotidohydrolase
YP_002504546.1	TIGRFAM: small GTP-binding protein; GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: cth:Cthe_2081 small GTP-binding protein
YP_002504547.1	PFAM: NUDIX hydrolase; KEGG: aoe:Clos_1784 NUDIX hydrolase
YP_002504548.1	PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: cth:Cthe_2078 hypothetical protein
YP_002504549.1	PFAM: protein of unknown function DUF28; KEGG: cth:Cthe_2075 hypothetical protein
YP_002504551.1	KEGG: chy:CHY_1887 hypothetical protein
YP_002504552.1	KEGG: csc:Csac_0632 hypothetical protein
YP_002504553.1	PFAM: helix-turn-helix- domain containing protein AraC type; transcription activator effector binding; KEGG: bld:BLi00678 hypothetical protein
YP_002504554.1	KEGG: lbl:LBL_1122 hypothetical protein
YP_002504555.1	PFAM: methyltransferase small; KEGG: cpy:Cphy_3378 methyltransferase small
YP_002504557.1	KEGG: cbe:Cbei_3830 hypothetical protein
YP_002504558.1	PFAM: Appr-1-p processing domain protein; KEGG: blo:BL0806 hypothetical protein
YP_002504559.1	PFAM: NADPH-dependent FMN reductase; KEGG: cbh:CLC_0982 hypothetical protein
YP_002504560.1	KEGG: fnu:FN0557 hypothetical protein
YP_002504561.1	KEGG: cpo:COPRO5265_1350 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_002504562.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cpy:Cphy_3008 ABC transporter
YP_002504563.1	KEGG: cdf:CD2104  ABC transporter permease protein
YP_002504564.1	PFAM: protein of unknown function DUF1113; KEGG: cpf:CPF_1398 hypothetical protein
YP_002504565.1	PFAM: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: csc:Csac_0684 response regulator receiver protein
YP_002504566.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase internal region; KEGG: cbe:Cbei_4963 integral membrane sensor signal transduction histidine kinase
YP_002504567.1	PFAM: extracellular solute-binding protein family 1; KEGG: cbe:Cbei_4964 extracellular solute-binding protein, family 1
YP_002504568.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: oih:OB0775 sugar ABC transporter permease
YP_002504569.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH3682 sugar ABC transporter (permease)
YP_002504570.1	PFAM: glycoside hydrolase; KEGG: cbe:Cbei_4974 glycoside hydrolase, family 3 domain protein
YP_002504571.1	PFAM: NGN domain protein; KEGG: cth:Cthe_1362 NusG antitermination factor
YP_002504572.1	PFAM: tRNA synthetase class I (M); KEGG: aoe:Clos_1001 methionine--tRNA ligase
YP_002504574.1	PFAM: transposase IS3/IS911 family protein; KEGG: lwe:lwe2186 transposase
YP_002504575.1	PFAM: integrase; KEGG: ckl:CKL_3445 transposase
YP_002504576.1	PFAM: xanthine/uracil/vitamin C permease; sulfate transporter; KEGG: cth:Cthe_1251 xanthine/uracil/vitamin C permease
YP_002504577.1	PFAM: acetyl xylan esterase; KEGG: bha:BH3326 acetylxylan esterase (cephalosporin-C deacetylase)
YP_002504578.1	KEGG: cbt:CLH_3263 ATPase
YP_002504579.1	catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP
YP_002504580.1	KEGG: csc:Csac_0293 hypothetical protein
YP_002504581.1	PFAM: glucuronate isomerase; KEGG: bsu:BSU12300 glucuronate isomerase
YP_002504582.1	PFAM: protein of unknown function DUF255; KEGG: cth:Cthe_0291 hypothetical protein
YP_002504583.1	PFAM: transcriptional regulator PadR family protein; KEGG: cbf:CLI_0152 PadR family transcriptional regulator
YP_002504584.1	KEGG: cac:CA_P0154 hypothetical protein
YP_002504585.1	PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: mba:Mbar_A2392 hypothetical protein
YP_002504586.1	PFAM: chemotaxis sensory transducer; KEGG: cth:Cthe_0266 methyl-accepting chemotaxis sensory transducer
YP_002504587.1	PFAM: integrase; KEGG: lpf:lpl2033 hypothetical protein
YP_002504588.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; CHASE3 domain protein; KEGG: lsp:Bsph_4425 methyl-accepting chemotaxis protein McpA (H1)
YP_002504589.1	PFAM: regulatory protein GntR HTH; KEGG: cbe:Cbei_4343 regulatory protein GntR, HTH
YP_002504590.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: blj:BLD_0790 ABC-type multidrug transporter ATPase component
YP_002504591.1	KEGG: pth:PTH_0277 hypothetical protein
YP_002504592.1	KEGG: ctc:CTC01036 hypothetical protein
YP_002504593.1	KEGG: aoe:Clos_0732 hypothetical protein
YP_002504594.1	KEGG: csc:Csac_0468 hypothetical protein
YP_002504595.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: csc:Csac_0467 ECF subfamily RNA polymerase sigma-24 factor
YP_002504596.1	KEGG: nth:Nther_0814 hypothetical protein
YP_002504597.1	PFAM: NUDIX hydrolase; KEGG: tte:TTE1781 ADP-ribose pyrophosphatase
YP_002504598.1	PFAM: glycoside hydrolase family 9; type 3a cellulose-binding domain protein; cellulosome protein dockerin type I; KEGG: cth:Cthe_0043 glycoside hydrolase family protein
YP_002504599.1	KEGG: bat:BAS1604 hypothetical protein
YP_002504600.1	TIGRFAM: C_GCAxxG_C_C family protein; KEGG: cth:Cthe_1399 C_GCAxxG_C_C family protein
YP_002504601.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: haloacid dehalogenase; E1-E2 ATPase-associated domain protein; KEGG: aoe:Clos_1087 heavy metal translocating P-type ATPase
YP_002504602.1	PFAM: Heavy metal transport/detoxification protein; KEGG: fma:FMG_0054  cation-transporting P-type ATPase
YP_002504603.1	PFAM: regulatory protein ArsR; KEGG: tex:Teth514_1161 regulatory protein, ArsR
YP_002504604.1	PFAM: peptidase U57 YabG; KEGG: cth:Cthe_2507 peptidase U57, YabG
YP_002504606.1	KEGG: LOC100083241; similar to vitellogenin
YP_002504608.1	KEGG: shl:Shal_3574 hypothetical protein
YP_002504609.1	catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA
YP_002504610.1	PFAM: conserved hypothetical protein; KEGG: cth:Cthe_2143 hypothetical protein
YP_002504611.1	involved in a recombinational process of DNA repair, independent of the recBC complex
YP_002504613.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cpy:Cphy_0704 two component transcriptional regulator
YP_002504614.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: cpy:Cphy_0705 integral membrane sensor signal transduction histidine kinase
YP_002504615.1	catalyzes the hydrolysis of pyrophosphate to phosphate
YP_002504616.1	KEGG: mla:Mlab_1595 hypothetical protein
YP_002504617.1	KEGG: swo:Swol_2179 hypothetical protein
YP_002504618.1	PFAM: Spore coat protein CotH; KEGG: cpy:Cphy_0703 spore coat protein CotH
YP_002504619.1	PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: cth:Cthe_2870 hypothetical protein
YP_002504620.1	KEGG: cth:Cthe_2131 hypothetical protein
YP_002504621.1	KEGG: cth:Cthe_2130 hypothetical protein
YP_002504622.1	TIGRFAM: peptide chain release factor 1; PFAM: class I peptide chain release factor; PCRF domain protein; KEGG: cth:Cthe_2593 peptide chain release factor 1
YP_002504623.1	PFAM: zinc/iron permease; KEGG: cth:Cthe_2594 zinc/iron permease
YP_002504624.1	TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5 domain protein; SUA5/yciO/yrdC domain; KEGG: cth:Cthe_2595 translation factor SUA5
YP_002504625.1	PFAM: protein-tyrosine phosphatase, low molecular weight; KEGG: cth:Cthe_2596 protein tyrosine phosphatase
YP_002504626.1	TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: ribose/galactose isomerase; KEGG: cth:Cthe_2597 ribose-5-phosphate isomerase
YP_002504627.1	Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate
YP_002504628.1	PFAM: CMP/dCMP deaminase zinc-binding; KEGG: cth:Cthe_2599 CMP/dCMP deaminase, zinc-binding
YP_002504629.1	PFAM: glycosyl transferase family 4; UDP-N-acetylglucosamine 2-epimerase; KEGG: cth:Cthe_2601 UDP-N-acetylglucosamine 2-epimerase
YP_002504630.1	PFAM: OmpA/MotB domain protein; KEGG: ckl:CKL_3788 hypothetical protein
YP_002504631.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: csc:Csac_1524 MotA/TolQ/ExbB proton channel
YP_002504633.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0
YP_002504634.1	TIGRFAM: ATP synthase F0 C subunit; PFAM: H+transporting two-sector ATPase C subunit; KEGG: tte:TTE0631 F0F1 ATP synthase subunit C
YP_002504635.1	TIGRFAM: ATP synthase F0 subunit beta; PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: cth:Cthe_2604 ATP synthase F0 B subunit
YP_002504636.1	TIGRFAM: ATP synthase F1 subunit delta; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; KEGG: cth:Cthe_2605 ATP synthase F1 subunit delta
YP_002504637.1	produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit
YP_002504638.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit
YP_002504639.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit
YP_002504640.1	TIGRFAM: ATP synthase F1 subunit epsilon; PFAM: H+transporting two-sector ATPase delta/subunit epsilon; KEGG: cth:Cthe_2609 ATP synthase F1 subunit epsilon
YP_002504641.1	PFAM: S-layer domain protein; Fibronectin type III domain protein; KEGG: cth:Cthe_2454 fibronectin, type III
YP_002504642.1	PFAM: S-layer domain protein; KEGG: drm:Dred_2357 S-layer domain-containing protein
YP_002504643.1	KEGG: cth:Cthe_2611 fibronectin, type III
YP_002504644.1	PFAM: Fibronectin type III domain protein; KEGG: cth:Cthe_2612 fibronectin, type III
YP_002504645.1	PFAM: S-layer domain protein; KEGG: cth:Cthe_2613 S-layer-like domain-containing protein
YP_002504646.1	PFAM: protein of unknown function DUF1779; KEGG: cth:Cthe_2614 hypothetical protein
YP_002504647.1	TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); KEGG: cth:Cthe_2615 UDP-N-acetylglucosamine 1-carboxyvinyltransferase
YP_002504648.1	TIGRFAM: SpoIID/LytB domain protein; stage II sporulation protein D; PFAM: stage II sporulation D domain protein; KEGG: cth:Cthe_2616 SpoIID/LytB domain-containing protein
YP_002504649.1	PFAM: peptidase M23; KEGG: cth:Cthe_2617 peptidase M23B
YP_002504650.1	D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli
YP_002504651.1	PFAM: Domain of unknown function DUF1934; KEGG: cth:Cthe_1936 hypothetical protein
YP_002504652.1	catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase
YP_002504653.1	PFAM: cellulosome protein dockerin type I; polysaccharide deacetylase; KEGG: cth:Cthe_2972 glycoside hydrolase family protein
YP_002504654.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: cbh:CLC_2681 methyl-accepting chemotaxis protein
YP_002504655.1	KEGG: cth:Cthe_1932 S-layer-like domain-containing protein
YP_002504656.1	PFAM: S-layer domain protein; KEGG: cth:Cthe_1931 S-layer-like domain-containing protein
YP_002504657.1	TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidoglycan-binding protein; peptidase S41; KEGG: cth:Cthe_1930 carboxyl-terminal protease
YP_002504658.1	CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer
YP_002504659.1	TIGRFAM: stage II sporulation protein R; PFAM: sporulation stage II protein R; KEGG: cth:Cthe_1920 stage II sporulation protein R
YP_002504660.1	PFAM: MgtC/SapB transporter; KEGG: cth:Cthe_1919 MgtC/SapB transporter
YP_002504661.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: cth:Cthe_1917 ATPase, P-type (transporting), HAD superfamily, subfamily IC
YP_002504662.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cth:Cthe_2706 ABC transporter
YP_002504663.1	PFAM: ABC transporter; KEGG: cth:Cthe_2707 ABC-type transporter involved in multi-copper enzyme maturation, permease component
YP_002504664.1	KEGG: cth:Cthe_2708 hypothetical protein
YP_002504665.1	KEGG: cth:Cthe_2709 hypothetical protein
YP_002504666.1	KEGG: cth:Cthe_2710 hypothetical protein
YP_002504667.1	KEGG: cth:Cthe_2711 hypothetical protein
YP_002504668.1	KEGG: cth:Cthe_2712 hypothetical protein
YP_002504669.1	catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis
YP_002504670.1	TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: cth:Cthe_2714 acetolactate synthase, large subunit
YP_002504671.1	PFAM: helicase; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: cbt:CLH_1287 ATP-dependent RNA helicase DbpA
YP_002504672.1	PFAM: ribosomal protein L33; KEGG: cac:CAC3151 50S ribosomal protein L33
YP_002504673.1	TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; KEGG: cth:Cthe_2718 preprotein translocase, SecE subunit
YP_002504674.1	TIGRFAM: transcription termination/antitermination factor NusG; PFAM: KOW domain protein; NGN domain protein; KEGG: cth:Cthe_2719 transcription antitermination protein NusG
YP_002504675.1	binds directly to 23S ribosomal RNA
YP_002504676.1	in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA
YP_002504677.1	PFAM: ribosomal protein L10; KEGG: cth:Cthe_2722 50S ribosomal protein L10P
YP_002504678.1	TIGRFAM: ribosomal protein L7/L12; PFAM: ribosomal protein L7/L12; KEGG: cth:Cthe_2723 50S ribosomal protein L12P
YP_002504679.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; subunit beta is part of the catalytic core which binds with a sigma factor to produce the holoenzyme
YP_002504680.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter
YP_002504681.1	PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG: cth:Cthe_2726 50S ribosomal protein L7AE
YP_002504682.1	interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance
YP_002504683.1	binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit
YP_002504684.1	EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene
YP_002504685.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu
YP_002504686.1	KEGG: cbo:CBO0408 hypothetical protein
YP_002504687.1	KEGG: dth:DICTH_0546 YdaE
YP_002504688.1	PFAM: beta-lactamase; flavodoxin/nitric oxide synthase; KEGG: drm:Dred_2942 hypothetical protein
YP_002504689.1	KEGG: cth:Cthe_1768 NifU-like domain-containing protein
YP_002504690.1	KEGG: cth:Cthe_1767 hypothetical protein
YP_002504691.1	PFAM: Firmicute transcriptional repressor of class III stress genes; KEGG: cth:Cthe_1792 firmicute transcriptional repressor of class III stress genes
YP_002504692.1	PFAM: UvrB/UvrC protein; KEGG: cth:Cthe_1791 UvrB/UvrC protein
YP_002504693.1	PFAM: ATP:guanido phosphotransferase; KEGG: cth:Cthe_1790 ATP:guanido phosphotransferase
YP_002504694.1	PFAM: UvrB/UvrC protein; ATPase AAA central domain protein; Clp domain protein; Torsin; ATPase associated with various cellular activities AAA_5; ATPase AAA; SMART: ATPase AAA; KEGG: cth:Cthe_1789 ATPase AAA-2
YP_002504695.1	PFAM: radical SAM protein; KEGG: cpy:Cphy_2677 radical SAM domain-containing protein
YP_002504696.1	KEGG: cpy:Cphy_2676 hypothetical protein
YP_002504700.1	PFAM: glycosyl transferase family 2; KEGG: cth:Cthe_1788 glycosyl transferase
YP_002504701.1	PFAM: glycoside hydrolase 15-related; KEGG: cth:Cthe_1787 glycoside hydrolase 15-related
YP_002504702.1	Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents
YP_002504703.1	non-specific DNA-binding; scans chromosomes during sporulation for DNA-damage; delays initiation of sporulation; participates in a checkpoint signaling cascade for cell-cycle progression and DNA repair
YP_002504704.1	PFAM: integrase; KEGG: lpf:lpl2033 hypothetical protein
YP_002504705.1	KEGG: cth:Cthe_1784 hypothetical protein
YP_002504706.1	PFAM: transcription factor CarD; KEGG: cth:Cthe_2940 CarD family transcriptional regulator
YP_002504707.1	PFAM: PilT protein domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: nucleotide binding protein PINc; KEGG: nth:Nther_0165 PilT protein domain protein
YP_002504708.1	TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: cth:Cthe_2941 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
YP_002504709.1	PFAM: ABC transporter transmembrane protein; ABC transporter related; SMART: ATPase AAA; KEGG: cac:CAC1558 ABC-type transport system,membrane ATPase component
YP_002504710.1	catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate
YP_002504711.1	catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro)
YP_002504712.1	PFAM: SH3 type 3 domain protein; SCP-like extracellular; SMART: SH3 domain protein; KEGG: cth:Cthe_2948 allergen V5/TPX-1 related
YP_002504713.1	TIGRFAM: pseudouridine synthase; PFAM: pseudouridine synthase; KEGG: cth:Cthe_1962 RluA family pseudouridine synthase
YP_002504714.1	PFAM: transferase; nucleotidyl transferase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; KEGG: cth:Cthe_1961 nucleotidyl transferase
YP_002504716.1	PFAM: GtrA family protein; KEGG: pdi:BDI_1652  GtrA family protein
YP_002504717.1	KEGG: tbd:Tbd_2287  integral membrane protein
YP_002504718.1	PFAM: UV-endonuclease UvdE; KEGG: cth:Cthe_1958  UV damage endonuclease
YP_002504719.1	PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: cth:Cthe_1955 RNA binding S1
YP_002504720.1	KEGG: cth:Cthe_1954 hypothetical protein
YP_002504722.1	KEGG: cth:Cthe_1951 hypothetical protein
YP_002504723.1	KEGG: cth:Cthe_1950 hypothetical protein
YP_002504724.1	KEGG: cbf:CLI_3364 hypothetical protein
YP_002504725.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cth:Cthe_1945 thioredoxin-disulfide reductase
YP_002504726.1	PFAM: ATP-binding region ATPase domain protein; KEGG: afl:Aflv_2620 sporulation histidine kinase A
YP_002504727.1	PFAM: cytochrome b5; KEGG: cth:Cthe_1942 hypothetical protein
YP_002504728.1	TIGRFAM: regulatory protein, FmdB family; PFAM:  regulatory protein FmdB; KEGG: cth:Cthe_1941 FmdB family regulatory protein
YP_002504729.1	TIGRFAM: Ku protein; PFAM: Ku domain protein; KEGG: bha:BH2208 hypothetical protein
YP_002504730.1	PFAM: ATP dependent DNA ligase; KEGG: nth:Nther_0138 ATP dependent DNA ligase
YP_002504731.1	TIGRFAM: DNA polymerase LigD, polymerase domain protein; PFAM: DNA primase small subunit; KEGG: swo:Swol_1124 hypothetical protein
YP_002504732.1	TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: drm:Dred_3002 UDP-glucose 4-epimerase
YP_002504733.1	KEGG: cpy:Cphy_0247 hypothetical protein
YP_002504734.1	KEGG: csc:Csac_2372 hypothetical protein
YP_002504735.1	TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: cth:Cthe_2875 sigma 54 modulation protein / 30S ribosomal protein S30P
YP_002504736.1	PFAM: sulfatase; KEGG: cac:CAC2802 phosphoglycerol transferase
YP_002504737.1	PFAM: shikimate kinase; KEGG: mem:Memar_2255 shikimate kinase
YP_002504738.1	TIGRFAM: ATP-dependent DNA helicase PcrA; PFAM: UvrD/REP helicase; KEGG: cth:Cthe_2876 ATP-dependent DNA helicase PcrA
YP_002504739.1	TIGRFAM: beta-galactosidase; PFAM: glycoside hydrolase family 1; KEGG: amr:AM1_2790 beta-glucosidase
YP_002504740.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: dsy:DSY4418 hypothetical protein
YP_002504741.1	KEGG: dsy:DSY4419 hypothetical protein
YP_002504742.1	KEGG: dsy:DSY4420 hypothetical protein
YP_002504743.1	KEGG: dsy:DSY4421 hypothetical protein
YP_002504744.1	PFAM: coagulation factor 5/8 type domain protein; glycoside hydrolase family 5; cellulosome protein dockerin type I; protein of unknown function DUF291; KEGG: cth:Cthe_0821 coagulation factor 5/8 type-like protein
YP_002504745.1	TIGRFAM: histidyl-tRNA synthetase 2; PFAM: tRNA synthetase class II (G H P and S); KEGG: cth:Cthe_2880 ATP phosphoribosyltransferase regulatory subunit
YP_002504746.1	short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ
YP_002504747.1	PFAM: histidinol dehydrogenase; KEGG: cth:Cthe_2882 histidinol dehydrogenase
YP_002504748.1	TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class V; aminotransferase class I and II; KEGG: cth:Cthe_2883 histidinol phosphate aminotransferase
YP_002504749.1	PFAM: imidazoleglycerol-phosphate dehydratase; KEGG: cth:Cthe_2884 imidazoleglycerol-phosphate dehydratase
YP_002504750.1	TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; KEGG: cth:Cthe_2885 phosphoribosylaminoimidazole-succinocarboxamide synthase
YP_002504751.1	with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide
YP_002504752.1	catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide
YP_002504753.1	catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase
YP_002504754.1	catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis
YP_002504755.1	KEGG: csc:Csac_0946 hypothetical protein
YP_002504756.1	10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring
YP_002504757.1	60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth
YP_002504758.1	KEGG: tte:TTE1989 hypothetical protein
YP_002504759.1	catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate
YP_002504760.1	necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
YP_002504761.1	TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: tpd:Teth39_0318 lysyl-tRNA synthetase
YP_002504762.1	KEGG: tpd:Teth39_0253 hypothetical protein
YP_002504763.1	TIGRFAM: anti-anti-sigma factor; PFAM: sulfate transporter/antisigma-factor antagonist STAS; KEGG: cth:Cthe_2898 anti-sigma-factor antagonist
YP_002504764.1	KEGG: cth:Cthe_2899  anti-sigma regulatory factor, serine/threonine protein kinase
YP_002504765.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, sigma-B/F/G subfamily; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: cth:Cthe_2900 RNA polymerase, sigma 28 subunit
YP_002504766.1	KEGG: cth:Cthe_2901  anti-sigma regulatory factor, serine/threonine protein kinase
YP_002504767.1	KEGG: bpu:BPUM_3575 hypothetical protein
YP_002504769.1	PFAM: transposase IS3/IS911 family protein; KEGG: cth:Cthe_0590 transposase IS3/IS911
YP_002504770.1	KEGG: dsy:DSY1945 hypothetical protein
YP_002504772.1	KEGG: esi:Exig_0300 hypothetical protein
YP_002504773.1	PFAM: integrase; KEGG: lpf:lpl2033 hypothetical protein
YP_002504774.1	PFAM: regulatory protein MarR; SMART: iron dependent repressor; KEGG: cbk:CLL_A1371 MarR family transcriptional regulator
YP_002504775.1	TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: deh:cbdb_A1621 major facilitator family transporter
YP_002504777.1	PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: ypm:YP_3381 pyridoxal-phosphate dependent protein
YP_002504778.1	catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis
YP_002504779.1	PFAM: alanine racemase domain protein; KEGG: bcs:BCAN_A1846 hypothetical protein
YP_002504780.1	PFAM: phosphoribosylglycinamide synthetase; protein of unknown function DUF6 transmembrane; KEGG: ypi:YpsIP31758_4090 hypothetical protein
YP_002504781.1	PFAM: cellulosome protein dockerin type I; KEGG: cth:Cthe_0246 carbohydrate-binding family 6 protein
YP_002504782.1	PFAM: transposase mutator type; KEGG: glo:Glov_3450 transposase mutator type
YP_002504783.1	PFAM: metal-dependent protein hydrolase; KEGG: amt:Amet_0463 metal-dependent protein hydrolase
YP_002504785.1	PFAM: major facilitator superfamily MFS_1; KEGG: aoe:Clos_0840 major facilitator transporter
YP_002504786.1	PFAM: van Willebrand factor A; KEGG: aoe:Clos_0839 VanW family protein
YP_002504787.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: swo:Swol_1359 hypothetical protein
YP_002504788.1	PFAM: aminotransferase class V; Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: cth:Cthe_1918 arginine decarboxylase
YP_002504790.1	PFAM: Resolvase domain; Recombinase; KEGG: spj:MGAS2096_Spy1103 site-specific recombinase
YP_002504791.1	PFAM: S-layer domain protein; glycoside hydrolase family 5; carbohydrate binding family 17/28; KEGG: csc:Csac_0678 cellulase
YP_002504792.1	PFAM: PKD domain containing protein; cellulosome protein dockerin type I; KEGG: cth:Cthe_0624 glycoside hydrolase family protein
YP_002504793.1	PFAM: Resolvase domain; Recombinase; KEGG: pth:PTH_0181 site-specific recombinases
YP_002504794.1	KEGG: cdf:CD0597  spore-coat protein
YP_002504795.1	KEGG: tte:TTE1799 hypothetical protein
YP_002504796.1	KEGG: afl:Aflv_0291 uncharacterized conserved two domain fusion protein
YP_002504797.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cth:Cthe_2804 ABC transporter
YP_002504798.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: cth:Cthe_2803 binding-protein-dependent transport systems inner membrane component
YP_002504799.1	SMART: extracellular solute-binding protein family 3; KEGG: cth:Cthe_2802 NlpA lipoprotein
YP_002504800.1	TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit; PFAM: Prismane; KEGG: cth:Cthe_2801 carbon-monoxide dehydrogenase, catalytic subunit
YP_002504802.1	PFAM: Resolvase domain; Recombinase; KEGG: drm:Dred_0913 resolvase domain-containing protein
YP_002504803.1	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: cbe:Cbei_2413 MATE efflux family protein
YP_002504804.1	one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit
YP_002504805.1	EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu
YP_002504806.1	TIGRFAM: uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: cth:Cthe_1004 uridylate kinase
YP_002504807.1	Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs
YP_002504808.1	KEGG: cth:Cthe_1002 hypothetical protein
YP_002504809.1	TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; KEGG: cth:Cthe_1001 undecaprenyl pyrophosphate synthetase
YP_002504810.1	PFAM: phosphatidate cytidylyltransferase; KEGG: cth:Cthe_1000 phosphatidate cytidylyltransferase
YP_002504811.1	catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate
YP_002504812.1	TIGRFAM: membrane-associated zinc metalloprotease; PFAM: PDZ/DHR/GLGF domain protein; peptidase M50; KEGG: cth:Cthe_0998 peptidase RseP
YP_002504813.1	TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: IspG family protein; KEGG: cth:Cthe_0997 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
YP_002504814.1	catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; required for leading strand synthesis; PolC exhibits 3' to 5' exonuclease activity
YP_002504815.1	PFAM: protein of unknown function DUF150; KEGG: cth:Cthe_0995 hypothetical protein
YP_002504816.1	KEGG: cth:Cthe_0994 NusA antitermination factor; TIGRFAM: transcription termination factor NusA; PFAM: RNA binding S1 domain protein; NusA domain protein; SMART: KH domain protein
YP_002504817.1	PFAM: protein of unknown function DUF448; KEGG: cth:Cthe_0993 hypothetical protein
YP_002504818.1	PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG: cth:Cthe_0992 50S ribosomal protein L7AE
YP_002504819.1	TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; GTP-binding protein HSR1-related; elongation factor Tu domain 2 protein; translation initiation factor IF-2 domain protein; Miro domain protein; KEGG: cth:Cthe_0991 translation initiation factor 2
YP_002504820.1	associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock
YP_002504821.1	PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: cth:Cthe_0989 phosphoesterase, RecJ-like protein
YP_002504822.1	TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: cth:Cthe_0988 tRNA pseudouridine synthase B
YP_002504823.1	TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; riboflavin kinase; KEGG: cth:Cthe_0987 riboflavin kinase / FMN adenylyltransferase
YP_002504824.1	TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC domain; zinc finger HypF domain protein; KEGG: gsu:GSU0306 hydrogenase maturation protein HypF
YP_002504825.1	TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: deb:DehaBAV1_1241 hydrogenase assembly chaperone HypC/HupF
YP_002504826.1	TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; KEGG: cac:CAC0811 hydrogenase expression-formation factor (HypD)
YP_002504827.1	TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: npu:Npun_R0359 hydrogenase expression/formation protein HypE
YP_002504828.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cth:Cthe_1763 ABC transporter
YP_002504829.1	KEGG: bay:RBAM_014080 YknW
YP_002504830.1	TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: cth:Cthe_1762 RND family efflux transporter MFP subunit
YP_002504831.1	PFAM: protein of unknown function DUF214; KEGG: cth:Cthe_1761 hypothetical protein
YP_002504833.1	PFAM: peptidase M16 domain protein; KEGG: cth:Cthe_0986 peptidase M16-like protein
YP_002504834.1	PFAM: peptidase M16 domain protein; KEGG: cth:Cthe_0985 peptidase M16-like protein
YP_002504835.1	PFAM: prolipoprotein diacylglyceryl transferase; KEGG: cth:Cthe_0984 prolipoprotein diacylglyceryl transferase
YP_002504836.1	TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: cth:Cthe_0983 cell cycle protein
YP_002504837.1	MraZ; UPF0040; crystal structure shows similarity to AbrB
YP_002504838.1	TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: cth:Cthe_0981 S-adenosyl-methyltransferase MraW
YP_002504839.1	KEGG: cth:Cthe_0980 cell division protein FtsL
YP_002504840.1	PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PASTA domain containing protein; KEGG: cth:Cthe_0979 peptidoglycan glycosyltransferase
YP_002504841.1	TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: cth:Cthe_0978 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase
YP_002504842.1	TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: cth:Cthe_0977 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
YP_002504843.1	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
YP_002504844.1	TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: cth:Cthe_0975 stage V sporulation protein E
YP_002504845.1	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis
YP_002504846.1	PFAM: small acid-soluble spore protein alpha/beta type; KEGG: cth:Cthe_3176 small acid-soluble spore protein, alpha/beta type
YP_002504847.1	TIGRFAM: uracil-xanthine permease; PFAM: xanthine/uracil/vitamin C permease; KEGG: drm:Dred_1317 uracil transporter
YP_002504848.1	PFAM: monogalactosyldiacylglycerol synthase; KEGG: cth:Cthe_3177 monogalactosyldiacylglycerol synthase
YP_002504849.1	PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: cth:Cthe_3179 serine-type D-Ala-D-Ala carboxypeptidase
YP_002504850.1	PFAM: cobalamin B12-binding domain protein; radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cth:Cthe_3186 radical SAM family protein
YP_002504851.1	PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: cth:Cthe_1205  serine protein kinase, PrkA
YP_002504852.1	TIGRFAM: sporulation protein YhbH; PFAM: protein of unknown function DUF444; KEGG: cth:Cthe_1204 hypothetical protein
YP_002504853.1	PFAM: SpoVR family protein; KEGG: cth:Cthe_1203 hypothetical protein
YP_002504854.1	molecular chaperone
YP_002504855.1	PFAM: chemotaxis sensory transducer; KEGG: lsp:Bsph_3073 hypothetical protein
YP_002504856.1	PFAM: AMP-dependent synthetase and ligase; KEGG: cth:Cthe_0551 AMP-dependent synthetase and ligase
YP_002504857.1	PFAM: hypothetical protein; Cupin 2 conserved barrel domain protein; KEGG: cth:Cthe_0552 transcriptional regulator
YP_002504858.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: cac:CAC1600 methyl-accepting chemotaxis-like protein (chemotaxis sensory transducer)
YP_002504859.1	KEGG: cac:CAC3650 HD-GYP domain-containing protein; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_002504860.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: cth:Cthe_0553 LysR family transcriptional regulator
YP_002504861.1	TIGRFAM: phosphoribosylformylglycinamidine synthase; PFAM: AIR synthase related protein domain protein; KEGG: cth:Cthe_0554 phosphoribosylformylglycinamidine synthase
YP_002504862.1	PFAM: xylose isomerase; KEGG: cth:Cthe_0234 AMP-dependent synthetase and ligase
YP_002504863.1	KEGG: cth:Cthe_0502 hypothetical protein
YP_002504864.1	KEGG: cac:CAC0037 MinD family ATPase
YP_002504865.1	PFAM: type II secretion system protein E; KEGG: cth:Cthe_1339 type II secretion system protein E
YP_002504866.1	KEGG: cth:Cthe_1338 Flp pilus assembly protein TadB-like protein
YP_002504867.1	KEGG: cth:Cthe_1337 type II secretion system protein
YP_002504869.1	KEGG: cth:Cthe_1336 hypothetical protein
YP_002504870.1	KEGG: cth:Cthe_1835 viral A-type inclusion repeat-containing protein
YP_002504871.1	KEGG: cth:Cthe_1830 hypothetical protein
YP_002504872.1	PFAM: peptidase A24A prepilin type IV; KEGG: cth:Cthe_1335 peptidase A24A, prepilin type IV
YP_002504873.1	PFAM: Forkhead-associated protein; KEGG: cth:Cthe_1334 FHA domain-containing protein
YP_002504874.1	PFAM: peptidase A24A prepilin type IV; KEGG: cth:Cthe_0545 prepilin peptidase CpaA
YP_002504875.1	PFAM: patatin; KEGG: cno:NT01CX_0225 patatin-like phospholipase
YP_002504876.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: tde:TDE2739 hypothetical protein
YP_002504877.1	PFAM: protein of unknown function UPF0047; KEGG: cth:Cthe_0456 hypothetical protein
YP_002504879.1	KEGG: cbh:CLC_1710 hypothetical protein
YP_002504880.1	PFAM: 3D domain protein; KEGG: cth:Cthe_0664 hypothetical protein
YP_002504881.1	PFAM: dihydrodipicolinate reductase; KEGG: cth:Cthe_1170 dihydrodipicolinate reductase
YP_002504882.1	PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: cth:Cthe_1171 serine-type D-Ala-D-Ala carboxypeptidase
YP_002504883.1	PFAM: GerA spore germination protein; KEGG: cth:Cthe_0667 GerA spore germination protein
YP_002504884.1	PFAM: Spore germination protein; KEGG: cth:Cthe_0670 spore germination protein
YP_002504885.1	TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: cth:Cthe_0669 spore germination B3 GerAC like
YP_002504886.1	PFAM: amino acid-binding ACT domain protein; KEGG: csc:Csac_1581 amino acid-binding ACT domain-containing protein
YP_002504887.1	catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis
YP_002504888.1	TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; KEGG: cth:Cthe_0962 dihydrodipicolinate synthase
YP_002504889.1	TIGRFAM: SpoIID/LytB domain protein; PFAM: stage II sporulation D domain protein; KEGG: cth:Cthe_0960 SpoIID/LytB domain-containing protein
YP_002504890.1	catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; lysine and threonine sensitive
YP_002504891.1	Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step
YP_002504892.1	TIGRFAM: tRNA-guanine transglycosylase, various specificities; queuine tRNA-ribosyltransferase; PFAM: queuine/other tRNA-ribosyltransferase; KEGG: cth:Cthe_0958 queuine tRNA-ribosyltransferase
YP_002504893.1	TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: csc:Csac_0272 preprotein translocase, YajC subunit
YP_002504894.1	KEGG: cth:Cthe_0955 hypothetical protein
YP_002504895.1	KEGG: amt:Amet_2345 hypothetical protein
YP_002504896.1	PFAM: radical SAM protein; KEGG: cth:Cthe_0906 radical SAM family protein
YP_002504897.1	PFAM: transferase hexapeptide repeat containing protein; KEGG: tpd:Teth39_1022 carbonic anhydrase
YP_002504898.1	TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecD; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: cth:Cthe_0904 protein-export membrane protein SecD
YP_002504899.1	TIGRFAM: protein-export membrane protein SecF; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: cth:Cthe_0903 protein translocase subunit SecF
YP_002504901.1	KEGG: ctc:CTC02517 hypothetical protein
YP_002504902.1	synthesizes RNA primers at the replication forks
YP_002504903.1	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; primary sigma factor of bacterium
YP_002504905.1	PFAM: protein of unknown function DUF633; KEGG: cth:Cthe_0893 hypothetical protein
YP_002504906.1	PFAM: protein of unknown function DUF34; KEGG: cpe:CPE2004 hypothetical protein
YP_002504907.1	PFAM: protein of unknown function DUF710; KEGG: cth:Cthe_2088 hypothetical protein
YP_002504908.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cbe:Cbei_0065 ferredoxin
YP_002504909.1	PFAM: amidohydrolase 2; KEGG: cth:Cthe_1291 amidohydrolase 2
YP_002504910.1	KEGG: hypothetical protein similar to fulmal1
YP_002504911.1	PFAM: NADPH-dependent FMN reductase; KEGG: cth:Cthe_0870 NADPH-dependent FMN reductase
YP_002504912.1	PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: cth:Cthe_3110 UBA/ThiF-type NAD/FAD binding fold
YP_002504913.1	KEGG: cth:Cthe_0869 hypothetical protein
YP_002504914.1	PFAM: DNA mismatch repair protein MutS domain protein; KEGG: cpy:Cphy_2383 DNA mismatch repair protein MutS domain-containing protein
YP_002504915.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cth:Cthe_0867 2-oxoglutarate ferredoxin oxidoreductase, delta subunit
YP_002504916.1	PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; transketolase; KEGG: cth:Cthe_0866 pyruvate flavodoxin/ferredoxin oxidoreductase-like protein
YP_002504917.1	PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: cth:Cthe_0865 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin)
YP_002504918.1	PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: cth:Cthe_0864 2-oxoglutarate ferredoxin oxidoreductase, subunit gamma
YP_002504919.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ckl:CKL_3392 hypothetical protein
YP_002504920.1	PFAM: protein of unknown function DUF214; KEGG: ckl:CKL_3391 hypothetical protein
YP_002504921.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cdf:CD1957 two-component response regulator
YP_002504922.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: spj:MGAS2096_Spy1107 two-component system histidine kinase
YP_002504923.1	PFAM: glutamine synthetase; KEGG: tpd:Teth39_1666 glutamine synthetase, catalytic region
YP_002504924.1	PFAM: transglutaminase; KEGG: cno:NT01CX_1704 transglutaminase-like enzyme, cysteine protease
YP_002504925.1	KEGG: cth:Cthe_0862 hypothetical protein
YP_002504927.1	PFAM: peptidase M24; KEGG: pca:Pcar_2614 Xaa-Pro aminopeptidase
YP_002504928.1	PFAM: polysaccharide deacetylase; KEGG: cth:Cthe_0557 polysaccharide deacetylase
YP_002504929.1	KEGG: noc:Noc_A0010 restriction endonuclease
YP_002504930.1	PFAM: protein of unknown function DUF881; KEGG: cth:Cthe_1076 hypothetical protein
YP_002504931.1	PFAM: protein of unknown function DUF881; KEGG: cth:Cthe_1075 hypothetical protein
YP_002504932.1	PFAM: polysaccharide deacetylase; KEGG: cth:Cthe_1074 polysaccharide deacetylase
YP_002504933.1	TIGRFAM: sporulation protein YqfC; PFAM: protein of unknown function DUF1429; KEGG: cth:Cthe_1073 hypothetical protein
YP_002504934.1	TIGRFAM: sporulation protein YqfD; PFAM:  stage IV sporulation YqfD; KEGG: cth:Cthe_1072  stage IV sporulation YqfD
YP_002504935.1	PFAM: PhoH family protein; KEGG: cth:Cthe_1071 PhoH-like protein
YP_002504936.1	KEGG: cth:Cthe_1070 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; metal-dependent phosphohydrolase 7TM intracellular region; SMART: metal-dependent phosphohydrolase HD region
YP_002504937.1	PFAM: protein of unknown function UPF0054; KEGG: cth:Cthe_1069 hypothetical protein
YP_002504938.1	PFAM: diacylglycerol kinase; KEGG: cbt:CLH_0872 diacylglycerol kinase/PAP2 family protein
YP_002504939.1	TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; KEGG: cth:Cthe_1068 cytidine deaminase
YP_002504940.1	TIGRFAM: small GTP-binding protein; GTP-binding protein Era; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; Miro domain protein; KEGG: cth:Cthe_1067 GTP-binding protein Era
YP_002504941.1	KEGG: afl:Aflv_0851 hypothetical protein
YP_002504942.1	TIGRFAM: DNA repair protein RecO; PFAM: recombination protein O RecO; KEGG: cth:Cthe_1066 DNA replication and repair protein RecO
YP_002504943.1	PFAM: phospholipase D/transphosphatidylase; KEGG: cno:NT01CX_1068 cardiolipin synthetase
YP_002504944.1	PFAM: ABC transporter transmembrane protein; ABC transporter related; SMART: ATPase AAA; KEGG: cbe:Cbei_2144 ABC transporter related
YP_002504945.1	PFAM: ABC transporter transmembrane protein; ABC transporter related; SMART: ATPase AAA; KEGG: cbe:Cbei_2145 ABC transporter related
YP_002504946.1	KEGG: fma:FMG_1340 hypothetical protein
YP_002504947.1	PFAM: integrase; KEGG: lpf:lpl2033 hypothetical protein
YP_002504948.1	PFAM: protein of unknown function DUF896; KEGG: lmo:lmo1304 hypothetical protein
YP_002504949.1	PFAM: CheW domain protein; KEGG: cth:Cthe_0878 CheW protein
YP_002504950.1	PFAM: integrase; KEGG: lpf:lpl2033 hypothetical protein
YP_002504951.1	translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1
YP_002504952.1	PFAM: hypothetical protein; KEGG: det:DET0230 TM2 domain-containing protein
YP_002504953.1	PFAM: regulatory protein MerR; KEGG: cth:Cthe_0804 MerR family transcriptional regulator
YP_002504954.1	TIGRFAM: pseudouridine synthase; PFAM: pseudouridine synthase; KEGG: cth:Cthe_0803 RluA family pseudouridine synthase
YP_002504955.1	PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aluminum resistance protein; KEGG: cth:Cthe_0794 aluminium resistance protein
YP_002504956.1	KEGG: cth:Cthe_0793 hypothetical protein
YP_002504957.1	PFAM: alanine racemase domain protein; KEGG: cth:Cthe_0792 hypothetical protein
YP_002504958.1	PFAM: protein of unknown function DUF552; KEGG: cth:Cthe_0791 hypothetical protein
YP_002504959.1	PFAM: protein of unknown function YGGT; KEGG: cth:Cthe_0790 hypothetical protein
YP_002504960.1	PFAM: RNA-binding S4 domain protein; KEGG: cth:Cthe_0789 RNA-binding S4
YP_002504961.1	PFAM: DivIVA family protein; KEGG: cth:Cthe_0788 hypothetical protein
YP_002504962.1	PFAM: cell divisionFtsK/SpoIIIE; KEGG: cth:Cthe_1095 cell divisionFtsK/SpoIIIE
YP_002504963.1	PFAM: hypothetical protein; Tetratricopeptide TPR_2 repeat protein; SMART: hypothetical protein; KEGG: TPR Domain containing protein
YP_002504964.1	PFAM: radical SAM protein; radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cth:Cthe_1094 hypothetical protein
YP_002504965.1	PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: cth:Cthe_1093 methenyltetrahydrofolate cyclohydrolase
YP_002504966.1	KEGG: cth:Cthe_1091 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; YmdA/YtgF protein; PFAM: KH type 1 domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KH domain protein
YP_002504967.1	PFAM: metallophosphoesterase; KEGG: cth:Cthe_1090 hypothetical protein
YP_002504968.1	PFAM: protein of unknown function DUF152; KEGG: cth:Cthe_0911 hypothetical protein
YP_002504969.1	PFAM: extracellular solute-binding protein family 5; KEGG: cth:Cthe_0910 extracellular solute-binding protein
YP_002504970.1	lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis
YP_002504971.1	TIGRFAM: pseudouridine synthase; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: cth:Cthe_0908 ribosomal large subunit pseudouridine synthase D
YP_002504972.1	PFAM: phosphoribosyltransferase; KEGG: cth:Cthe_0954 uracil phosphoribosyltransferase
YP_002504973.1	catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis
YP_002504974.1	TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; amidohydrolase; KEGG: cth:Cthe_0952 dihydroorotase
YP_002504975.1	TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: cth:Cthe_0951 orotidine 5'-phosphate decarboxylase
YP_002504976.1	TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; carbamoyl-phosphate synthase small chain; KEGG: cth:Cthe_0950 carbamoyl-phosphate synthase small subunit
YP_002504977.1	four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity
YP_002504978.1	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: cth:Cthe_0948 dihydroorotate oxidase B, electron transfer subunit
YP_002504979.1	TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: dihydroorotate dehydrogenase; KEGG: cth:Cthe_0947 dihydroorotate oxidase B, catalytic subunit
YP_002504980.1	PFAM: phosphoglycerate mutase; KEGG: cth:Cthe_0946 phosphoglycerate mutase
YP_002504981.1	KEGG: cth:Cthe_0784 hypothetical protein
YP_002504982.1	PFAM: protein of unknown function DUF1287; KEGG: chy:CHY_2180 hypothetical protein
YP_002504983.1	TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: amt:Amet_3503 YbaK/EbsC protein
YP_002504984.1	KEGG: gur:Gura_0797 hypothetical protein
YP_002504985.1	PFAM: radical SAM protein; KEGG: cbe:Cbei_4361 radical SAM protein
YP_002504986.1	PFAM: YibE/F family protein; KEGG: dsy:DSY3067 hypothetical protein
YP_002504987.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: wsu:WS2095 hypothetical protein
YP_002504988.1	PFAM: protein of unknown function DUF134; KEGG: csc:Csac_0224 hypothetical protein
YP_002504989.1	PFAM: dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: cpy:Cphy_3017 dinitrogenase iron-molybdenum cofactor biosynthesis protein
YP_002504990.1	PFAM: conserved hypothetical protein; KEGG: cbf:CLI_0435 hypothetical protein
YP_002504991.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: cno:NT01CX_0182 LysR family transcriptional regulator
YP_002504992.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cbe:Cbei_3003 4Fe-4S ferredoxin iron-sulfur binding domain protein
YP_002504993.1	KEGG: cts:Ctha_2703 hypothetical protein
YP_002504994.1	KEGG: ckl:CKL_1492 hypothetical protein
YP_002504995.1	KEGG: ckl:CKL_2293 hypothetical protein
YP_002504996.1	PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: cac:CAC3420 low specificity L-threonine aldolase
YP_002504997.1	KEGG: cth:Cthe_2177 hypothetical protein
YP_002504998.1	KEGG: cth:Cthe_2178 hypothetical protein
YP_002504999.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ckl:CKL_2395 short-chain dehydrogenases/reductase
YP_002505000.1	KEGG: csc:Csac_0382 DNA repair photolyase-like protein
YP_002505001.1	KEGG: tex:Teth514_2337 hypothetical protein
YP_002505002.1	KEGG: cpy:Cphy_1776 hypothetical protein
YP_002505003.1	PFAM: NAD(P)H dehydrogenase (quinone); KEGG: cdf:CD1543  acyl carrier protein phosphodiesterase
YP_002505004.1	PFAM: S-layer domain protein; glycoside hydrolase family 18; SMART: chitinase II; KEGG: aoe:Clos_1547 glycoside hydrolase family protein
YP_002505005.1	PFAM: cobalbumin biosynthesis protein; SMART: AAA ATPase; KEGG: tte:TTE0381 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase
YP_002505006.1	catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole
YP_002505007.1	catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole
YP_002505008.1	KEGG: aoe:Clos_0104 hypothetical protein
YP_002505009.1	PFAM: Fibronectin type III domain protein; KEGG: swd:Swoo_0198 hypothetical protein
YP_002505010.1	PFAM: cellulosome protein dockerin type I; KEGG: cac:CA_P0119 xylan degradation protein
YP_002505011.1	PFAM: transposase IS116/IS110/IS902 family protein; KEGG: tte:TTE1030 transposase
YP_002505012.1	KEGG: cac:CAC3440 hypothetical protein
YP_002505013.1	TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: amt:Amet_1283 spore germination protein
YP_002505014.1	PFAM: GerA spore germination protein; KEGG: cac:CA_P0020 spore germination protein, GrkA
YP_002505016.1	KEGG: bcj:BCAL2501 hypothetical protein
YP_002505018.1	KEGG: amt:Amet_3180 hypothetical protein
YP_002505019.1	PFAM: GCN5-related N-acetyltransferase; KEGG: cbf:CLI_3229 acetyltransferase
YP_002505020.1	PFAM: DEAD_2 domain protein; SMART: Helicase-like, DEXD box c2 type; helicase c2; KEGG: cth:Cthe_0289 DEAD_2
YP_002505021.1	PFAM: UvrD/REP helicase; KEGG: cth:Cthe_0968 UvrD/REP helicase
YP_002505022.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; hydrolase, HAD-superfamily, subfamily IIIA; HAD superfamily (subfamily IIIA) phosphatase, TIGR01668; PFAM: HAD-superfamily phosphatase subfamily IIIA; KEGG: cth:Cthe_0855 HAD family phosphatase
YP_002505023.1	TIGRFAM: shikimate 5-dehydrogenase; PFAM: shikimate/quinate 5-dehydrogenase; shikimate dehydrogenase substrate binding domain protein; KEGG: cth:Cthe_0854 shikimate dehydrogenase
YP_002505024.1	KEGG: cth:Cthe_0851 hypothetical protein
YP_002505025.1	PFAM: hypothetical protein; KEGG: lwe:lwe1513 DedA family membrane protein
YP_002505026.1	TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: cth:Cthe_0727 cell envelope-related transcriptional attenuator
YP_002505027.1	TIGRFAM: indolepyruvate ferredoxin oxidoreductase, alpha subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; thiamine pyrophosphate protein domain protein TPP-binding; KEGG: cth:Cthe_0613 thiamine pyrophosphate enzyme-like TPP-binding
YP_002505028.1	Involved in the incorporation of exogenous aryl acids in the biosynthesis of aromatic amino acids: catalysis of the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
YP_002505029.1	KEGG: cth:Cthe_0615 phenylacetate-CoA ligase
YP_002505030.1	PFAM: amino acid-binding ACT domain protein; KEGG: cth:Cthe_0616 ACT domain-containing protein
YP_002505031.1	PFAM: 4'-phosphopantetheinyl transferase; KEGG: ckl:CKL_1736 4'-phosphopantetheinyl transferase
YP_002505032.1	PFAM: thioesterase; KEGG: bcz:BCZK1713 thioesterase
YP_002505033.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: cpy:Cphy_0710 NAD-dependent epimerase/dehydratase
YP_002505034.1	TIGRFAM: molybdenum cofactor synthesis protein; competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; damage inducible protein CinA; KEGG: cth:Cthe_1052 competence/damage-inducible protein CinA
YP_002505035.1	TIGRFAM: integral membrane protein MviN; PFAM: multi antimicrobial extrusion protein MatE; virulence factor MVIN family protein; KEGG: cth:Cthe_1051 integral membrane protein MviN
YP_002505036.1	KEGG: cth:Cthe_1050 RecA protein; TIGRFAM: recA protein; PFAM: RecA domain protein; SMART: ATPase AAA
YP_002505037.1	PFAM: regulatory protein RecX; KEGG: cth:Cthe_1049 regulatory protein RecX
YP_002505038.1	KEGG: cth:Cthe_0942 MiaB-like tRNA modifying enzyme YliG; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme YliG; PFAM: radical SAM protein; protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB
YP_002505039.1	TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: cth:Cthe_0941 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
YP_002505040.1	negative regulator of genes involved in fatty acid and phospholipid biosynthesis for gram positive bacteria
YP_002505041.1	TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein; KEGG: cth:Cthe_0937 phosphate:acyl-[acyl carrier protein] acyltransferase
YP_002505042.1	TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: chalcone and stilbene synthase domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: cth:Cthe_0936 3-oxoacyl-[acyl-carrier-protein] synthase III
YP_002505043.1	TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase; KEGG: cth:Cthe_0935 [acyl-carrier-protein] S-malonyltransferase
YP_002505044.1	TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Male sterility domain; KR domain protein; KEGG: cth:Cthe_0934 3-oxoacyl-[acyl-carrier-protein] reductase
YP_002505045.1	TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine-binding; KEGG: cth:Cthe_0933 acyl carrier protein
YP_002505046.1	TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: beta-ketoacyl synthase; KEGG: cth:Cthe_0932 3-oxoacyl-[acyl-carrier-protein] synthase II
YP_002505047.1	cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity
YP_002505048.1	PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cth:Cthe_0930 radical SAM family protein
YP_002505049.1	PFAM: stage V sporulation protein S; KEGG: cac:CAC1750 SpoVS-related protein
YP_002505050.1	PFAM: manganese and iron superoxide dismutase; KEGG: cth:Cthe_3008 superoxide dismutase
YP_002505051.1	PFAM: Coat F domain protein; KEGG: cac:CAC1335 spore coat protein F (cotf) related protein
YP_002505052.1	KEGG: cth:Cthe_3195 hypothetical protein
YP_002505053.1	KEGG: mth:MTH933 hypothetical protein
YP_002505054.1	PFAM: aldo/keto reductase; KEGG: mba:Mbar_A2639 aldo/keto reductase
YP_002505055.1	TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: cth:Cthe_0927 condensin subunit Smc
YP_002505056.1	KEGG: cth:Cthe_0926 signal recognition particle-docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: ATPase AAA
YP_002505057.1	PFAM: protein of unknown function UPF0182; KEGG: csc:Csac_0864 hypothetical protein
YP_002505058.1	KEGG: csc:Csac_0715 amino acid transporter-like protein
YP_002505059.1	PFAM: ROK family protein; KEGG: cth:Cthe_2938 glucokinase
YP_002505060.1	KEGG: amt:Amet_3099 hypothetical protein
YP_002505061.1	Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates
YP_002505062.1	TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: radical SAM protein; KEGG: aoe:Clos_1145 anaerobic ribonucleoside-triphosphate reductase activating protein
YP_002505063.1	PFAM: sulfatase; KEGG: lsa:LSA1585  teichoic acid/polysaccharide phosphoglycerol transferase
YP_002505064.1	catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type II pantothenate kinases are not regulated by feedback inhibition by coenzyme A
YP_002505065.1	TIGRFAM: oligopeptide transporters, OPT superfamily; PFAM: oligopeptide transporter OPT superfamily protein; KEGG: fma:FMG_1322  oligopeptide transporter
YP_002505066.1	PFAM: protein of unknown function DUF88; KEGG: fjo:Fjoh_2410 hypothetical protein
YP_002505067.1	PFAM:  helix-turn-helix protein YlxM/p13 family protein; KEGG: cth:Cthe_0771  helix-turn-helix protein, YlxM/p13-like protein
YP_002505068.1	KEGG: cth:Cthe_0770 signal recognition particle subunit FFH/SRP54 (SRP54); TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: ATPase AAA
YP_002505069.1	binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity
YP_002505070.1	KEGG: cth:Cthe_0768 nucleic acid binding protein
YP_002505071.1	Essential for efficient processing of 16S rRNA
YP_002505072.1	TIGRFAM: tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; KEGG: cth:Cthe_0766 tRNA (guanine37-N1) methyltransferase
YP_002505073.1	this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
YP_002505074.1	TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; KEGG: cth:Cthe_0764 signal peptidase I
YP_002505075.1	TIGRFAM: GTP1/OBG protein; PFAM: GTP-binding protein HSR1-related; KEGG: cth:Cthe_0763 GTP-binding protein YlqF
YP_002505076.1	RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids
YP_002505077.1	KEGG: cth:Cthe_0760 hypothetical protein
YP_002505078.1	KEGG: cth:Cthe_0759 flagellar biosynthesis
YP_002505079.1	PFAM: protein of unknown function UPF0102; KEGG: cth:Cthe_0758 hypothetical protein
YP_002505080.1	PFAM: peptidase M19 renal dipeptidase; KEGG: cth:Cthe_0756 thermostable dipeptidase
YP_002505081.1	PFAM: aminotransferase class I and II; KEGG: bpu:BPUM_2114 aminotransferase
YP_002505082.1	Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide
YP_002505083.1	PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: cth:Cthe_0740 GntR family transcriptional regulator
YP_002505084.1	KEGG: cth:Cthe_1169 beta-lactamase class A-like protein
YP_002505085.1	PFAM: hypothetical protein; KEGG: cma:Cmaq_1693 hypothetical protein
YP_002505086.1	PFAM: protein of unknown function DUF1540; KEGG: amt:Amet_4089 hypothetical protein
YP_002505087.1	PFAM: type 3a cellulose-binding domain protein; cellulosome anchoring protein cohesin region; protein of unknown function DUF291; KEGG: cth:Cthe_3077 cellulosome anchoring protein, cohesin region
YP_002505088.1	PFAM: glycoside hydrolase family 48; cellulosome protein dockerin type I; KEGG: cpy:Cphy_3368 cellulose 1,4-beta-cellobiosidase
YP_002505089.1	PFAM: glycoside hydrolase family 8; cellulosome protein dockerin type I; KEGG: cth:Cthe_0269 glycoside hydrolase family protein
YP_002505090.1	PFAM: glycoside hydrolase family 9; type 3a cellulose-binding domain protein; cellulosome protein dockerin type I; KEGG: cac:CAC0913 non-processive endoglucanase
YP_002505091.1	PFAM: glycoside hydrolase family 9; cellulosome protein dockerin type I; carbohydrate-binding CenC domain protein; glycoside hydrolase family 9 domain protein Ig domain protein; KEGG: cac:CAC0561 cellulase CelE-like protein
YP_002505092.1	PFAM: cellulosome anchoring protein cohesin region; KEGG: cac:CAC0914 cellulosome integrating cohesin-containing protein, secreted
YP_002505093.1	PFAM: glycoside hydrolase family 9; type 3a cellulose-binding domain protein; cellulosome protein dockerin type I; KEGG: hau:Haur_0296 glycoside hydrolase family protein
YP_002505094.1	PFAM: glycoside hydrolase family 9; type 3a cellulose-binding domain protein; cellulosome protein dockerin type I; KEGG: cth:Cthe_2360 glycoside hydrolase family protein
YP_002505095.1	PFAM: cellulosome protein dockerin type I; KEGG: cac:CAC0918 non-processive endoglucanase
YP_002505096.1	PFAM: glycoside hydrolase family 9; cellulosome protein dockerin type I; KEGG: cth:Cthe_0274 glycoside hydrolase family protein
YP_002505097.1	PFAM: cellulosome protein dockerin type I; FG-GAP repeat protein; KEGG: bld:BLi01376 YesW
YP_002505098.1	PFAM: glycoside hydrolase family 5; cellulosome protein dockerin type I; KEGG: cth:Cthe_2872 glycoside hydrolase family protein
YP_002505099.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: cbe:Cbei_3221 LysR family transcriptional regulator
YP_002505100.1	KEGG: cpy:Cphy_2263 hypothetical protein
YP_002505101.1	PFAM: cell wall hydrolase/autolysin; KEGG: aoe:Clos_2218 cell wall hydrolase/autolysin
YP_002505102.1	PFAM: metallophosphoesterase; KEGG: bcl:ABC0931 hypothetical protein
YP_002505103.1	PFAM: Heavy metal transport/detoxification protein; KEGG: cth:Cthe_1849 heavy metal transport/detoxification protein
YP_002505104.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper ion binding protein; copper-translocating P-type ATPase; ATPase P; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: cth:Cthe_1848 copper-translocating P-type ATPase
YP_002505105.1	PFAM: NLP/P60 protein; SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: csc:Csac_1052 NLP/P60 protein
YP_002505106.1	PFAM: transposase IS200-family protein; KEGG: dsy:DSY1392 hypothetical protein
YP_002505107.1	catalyzes the reduction of hydroxylamine to ammonia and water
YP_002505108.1	PFAM: glycoside hydrolase family 11; cellulosome protein dockerin type I; KEGG: cth:Cthe_2972 glycoside hydrolase family protein
YP_002505109.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: cth:Cthe_2633 hypothetical protein
YP_002505110.1	PFAM: glycoside hydrolase family 26; cellulosome protein dockerin type I; KEGG: cth:Cthe_2811 glycoside hydrolase family protein
YP_002505111.1	PFAM: glycoside hydrolase family 9; cellulosome protein dockerin type I; KEGG: cth:Cthe_0433 glycoside hydrolase family protein
YP_002505112.1	PFAM: transposase IS116/IS110/IS902 family protein; KEGG: tte:TTE1030 transposase
YP_002505113.1	PFAM: glycoside hydrolase family 9; cellulosome protein dockerin type I; glycoside hydrolase family 9 domain protein Ig domain protein; KEGG: cth:Cthe_0825 glycoside hydrolase family protein
YP_002505114.1	KEGG: amt:Amet_3724 glutamine-rich
YP_002505115.1	NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex
YP_002505116.1	binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin
YP_002505117.1	L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA
YP_002505118.1	binds third domain of 23S rRNA and protein L29; part of exit tunnel
YP_002505119.1	one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation
YP_002505120.1	protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
YP_002505121.1	binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center
YP_002505122.1	KEGG: cth:Cthe_2909 30S ribosomal protein S3P; TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; KH type 2 domain protein; ribosomal protein S3 domain; SMART: KH domain protein
YP_002505123.1	located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e
YP_002505124.1	one of the stabilizing components for the large ribosomal subunit
YP_002505125.1	PFAM: ribosomal protein S17; KEGG: cpy:Cphy_3658 ribosomal protein S17
YP_002505126.1	binds to the 23S rRNA between the centers for peptidyl transferase and GTPase
YP_002505127.1	assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel
YP_002505128.1	part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13
YP_002505129.1	located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif
YP_002505130.1	binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
YP_002505131.1	TIGRFAM: ribosomal protein L6 signature 1; PFAM: ribosomal protein L6; KEGG: cth:Cthe_2918 50S ribosomal protein L6P
YP_002505132.1	TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E; KEGG: tpd:Teth39_0390 50S ribosomal protein L18
YP_002505133.1	located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance
YP_002505134.1	L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7
YP_002505135.1	late assembly protein
YP_002505136.1	TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein; KEGG: cth:Cthe_2923 protein translocase subunit SecY/sec61 alpha
YP_002505137.1	PFAM: adenylate kinase; adenylate kinase lid domain protein; KEGG: cth:Cthe_2924 adenylate kinase
YP_002505138.1	TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: cth:Cthe_2925 methionine aminopeptidase, type I
YP_002505139.1	KEGG: cth:Cthe_2926 hypothetical protein
YP_002505140.1	stimulates the activities of the other two initiation factors, IF-2 and IF-3
YP_002505141.1	smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif
YP_002505142.1	located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA
YP_002505143.1	located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3
YP_002505144.1	PFAM: ribosomal protein S4; RNA-binding S4 domain protein; KEGG: cth:Cthe_2931 30S ribosomal protein S4P
YP_002505145.1	catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme
YP_002505146.1	is a component of the macrolide binding site in the peptidyl transferase center
YP_002505147.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cth:Cthe_2934 ABC transporter
YP_002505148.1	PFAM: methyltransferase small; KEGG: pmo:Pmob_1502 methyltransferase small
YP_002505149.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cth:Cthe_2936 cobalt transporter ATP-binding subunit
YP_002505150.1	PFAM: cobalt transporter; KEGG: cth:Cthe_2937 cobalt transporter
YP_002505151.1	mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability
YP_002505152.1	in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit
YP_002505153.1	forms a direct contact with the tRNA during translation
YP_002505154.1	TIGRFAM: Mn2+/Fe2+ transporter NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: cac:CA_P0063 NRAMP manganese transporter MntA
YP_002505155.1	PFAM: iron dependent repressor; KEGG: cth:Cthe_1402 DtxR family iron dependent repressor
YP_002505156.1	PFAM: amidohydrolase; amidohydrolase; KEGG: cth:Cthe_1777 amidohydrolase
YP_002505157.1	PFAM: protein of unknown function UPF0079; KEGG: cth:Cthe_1776 hypothetical protein
YP_002505158.1	PFAM: peptidase M22 glycoprotease; KEGG: cth:Cthe_1775 peptidase M22, glycoprotease
YP_002505159.1	TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: cth:Cthe_1774 30S ribosomal protein S18P alanine acetyltransferase
YP_002505160.1	KEGG: cth:Cthe_1773 peptidase S16, lon-like protein
YP_002505161.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: cth:Cthe_2731 ECF subfamily RNA polymerase sigma-24 factor
YP_002505162.1	KEGG: cth:Cthe_2732 hypothetical protein
YP_002505163.1	KEGG: nth:Nther_2043 hypothetical protein
YP_002505164.1	TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: cth:Cthe_2735 HPrNtr domain-containing protein
YP_002505165.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
YP_002505166.1	PFAM: metallophosphoesterase; KEGG: cth:Cthe_2738 metallophosphoesterase
YP_002505167.1	Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer
YP_002505168.1	hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates
YP_002505169.1	binds and unfolds substrates as part of the ClpXP protease
YP_002505170.1	KEGG: cth:Cthe_2742 endopeptidase La; TIGRFAM: ATP-dependent protease LonB; PFAM: magnesium chelatase ChlI subunit; AAA ATPase central domain protein; peptidase S16; SMART: AAA ATPase
YP_002505172.1	in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity
YP_002505173.1	PFAM: lytic transglycosylase catalytic; KEGG: cth:Cthe_2744 lytic transglycosylase, catalytic
YP_002505174.1	KEGG: cth:Cthe_2745 hypothetical protein
YP_002505175.1	PFAM: protein of unknown function DUF402; KEGG: cth:Cthe_2746 hypothetical protein
YP_002505176.1	PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: cth:Cthe_2747 PHP-like protein
YP_002505177.1	binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation
YP_002505178.1	PFAM: integrase family protein; KEGG: chy:CHY_1702 prophage LambdaCh01, site-specific recombinase phage integrase family protein protein
YP_002505179.1	KEGG: mfl:Mfl667 ribose ABC transporter permease component
YP_002505180.1	KEGG: cpy:Cphy_2996 hypothetical protein
YP_002505181.1	PFAM: integrase; KEGG: lpf:lpl2033 hypothetical protein
YP_002505182.1	PFAM: transposase IS3/IS911 family protein; KEGG: cth:Cthe_0590 transposase IS3/IS911
YP_002505183.1	KEGG: cbb:CLD_2462 hypothetical protein
YP_002505184.1	KEGG: cbb:CLD_2071 hypothetical protein
YP_002505187.1	PFAM: SH3 type 3 domain protein; KEGG: NLP/P60 family protein
YP_002505189.1	PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: bha:BH3665 N-acetylmuramoyl-L-alanine amidase (major autolysin)
YP_002505191.1	TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: ckl:CKL_4048 DNA methylase
YP_002505192.1	KEGG: hypothetical protein
YP_002505193.1	KEGG: cbe:Cbei_3830 hypothetical protein
YP_002505194.1	KEGG: tex:Teth514_0698 recombinase
YP_002505195.1	PFAM: transposase IS3/IS911 family protein; KEGG: cth:Cthe_0590 transposase IS3/IS911
YP_002505196.1	PFAM: glycoside hydrolase family 5; cellulosome protein dockerin type I; carbohydrate binding family 11; KEGG: cth:Cthe_1472 carbohydrate-binding family 11 protein
YP_002505197.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: cbk:CLL_A3535 AraC family transcriptional regulator
YP_002505198.1	PFAM: transposase IS3/IS911 family protein; KEGG: cth:Cthe_0590 transposase IS3/IS911
YP_002505199.1	KEGG: cbf:CLI_1565 hypothetical protein
YP_002505200.1	PFAM: Resolvase domain; Recombinase; KEGG: tex:Teth514_0698 recombinase
YP_002505201.1	KEGG: cpy:Cphy_3763 hypothetical protein
YP_002505202.1	KEGG: dsy:DSY0716 hypothetical protein
YP_002505203.1	PFAM: NGN domain protein; KEGG: cth:Cthe_1362 NusG antitermination factor
YP_002505204.1	PFAM: beta-lactamase; KEGG: bsu:BSU17090 involved in polyketide synthesis
YP_002505205.1	PFAM: acyl transferase; KEGG: bay:RBAM_016920 BaeD
YP_002505206.1	TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PfaD family protein; PFAM: 2-nitropropane dioxygenase NPD; acyl transferase; KEGG: gur:Gura_3105 malonyl CoA-acyl carrier protein transacylase
YP_002505207.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mxa:MXAN_2430 ABC transporter ATP-binding protein
YP_002505208.1	PFAM: protein of unknown function DUF214; KEGG: afw:Anae109_0497 hypothetical protein
YP_002505209.1	PFAM: protein of unknown function DUF214; KEGG: ade:Adeh_3937 hypothetical protein
YP_002505210.1	PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; beta-ketoacyl synthase; KEGG: bay:RBAM_014340 MlnB
YP_002505211.1	PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; beta-ketoacyl synthase; KEGG: bay:RBAM_014350 MlnC
YP_002505212.1	PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; beta-ketoacyl synthase; KEGG: bay:RBAM_014390 MlnG
YP_002505213.1	PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; beta-ketoacyl synthase; KEGG: bay:RBAM_014360 MlnD
YP_002505214.1	PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; beta-ketoacyl synthase; KEGG: gur:Gura_3095 beta-ketoacyl synthase
YP_002505215.1	PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; beta-ketoacyl synthase; KEGG: bay:RBAM_014350 MlnC
YP_002505216.1	TIGRFAM: amino acid adenylation protein; PFAM: alpha/beta hydrolase fold; AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; beta-ketoacyl synthase; KEGG: bay:RBAM_016980 BaeJ
YP_002505217.1	KEGG: lpc:LPC_2985 acyl carrier protein
YP_002505218.1	PFAM: beta-ketoacyl synthase; KEGG: tte:TTE1470 3-oxoacyl-(acyl-carrier-protein) synthase
YP_002505219.1	PFAM: beta-ketoacyl synthase; KEGG: tye:THEYE_A0103 beta-ketoacyl-acyl carrier protein synthase II
YP_002505220.1	PFAM: beta-ketoacyl synthase; KEGG: bcl:ABC2546 3-oxoacyl-[acyl-carrier-protein] synthase
YP_002505222.1	PFAM: alpha/beta hydrolase fold; KEGG: amt:Amet_0320 alpha/beta hydrolase fold
YP_002505224.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: tpd:Teth39_1287 3-oxoacyl-(acyl-carrier-protein) reductase
YP_002505225.1	PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: sez:Sez_1209 oxygen-independent coproporphyrinogen III oxidase 1
YP_002505226.1	PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: wpi:WP1025 3-oxoacyl-(acyl-carrier-protein) synthase III
YP_002505227.1	KEGG: rxy:Rxyl_2997 coenzyme F390 synthetase-like protein
YP_002505228.1	PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: rfr:Rfer_3218 UBA/ThiF-type NAD/FAD binding protein
YP_002505229.1	PFAM: major facilitator superfamily MFS_1; KEGG: csc:Csac_1170 major facilitator transporter
YP_002505230.1	KEGG: cth:Cthe_2575 hypothetical protein
YP_002505231.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: dsy:DSY3394 hypothetical protein
YP_002505232.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cth:Cthe_2573 ABC transporter
YP_002505233.1	KEGG: cth:Cthe_2805 carbohydrate-binding, CenC-like protein
YP_002505234.1	KEGG: dsy:DSY3041 hypothetical protein
YP_002505235.1	PFAM: polysaccharide deacetylase; KEGG: tte:TTE2603 xylanase/chitin deacetylase
YP_002505236.1	PFAM: peptidase M23; KEGG: cpy:Cphy_2289 peptidase M23B
YP_002505237.1	PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: swo:Swol_0316 extracellular solute-binding protein, family 3
YP_002505238.1	TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mst:Msp_0959 polar amino acid ABC transporter permease
YP_002505239.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dsy:DSY3385 hypothetical protein
YP_002505240.1	PFAM: hypothetical protein; Cupin 2 conserved barrel domain protein; KEGG: cno:NT01CX_1225 DNA-binding protein
YP_002505241.1	KEGG: dsy:DSY1461 hypothetical protein; TIGRFAM: spermidine/putrescine ABC transporter ATPase; PFAM: ABC transporter related; transport-associated OB domain protein; SMART: ATPase AAA
YP_002505242.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: aoe:Clos_2539 binding-protein-dependent transport systems inner membrane component
YP_002505243.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: aoe:Clos_2538 ornithine carbamoyltransferase
YP_002505244.1	PFAM: extracellular solute-binding protein family 1; KEGG: cno:NT01CX_1229 extracellular solute-binding protein
YP_002505245.1	PFAM: rubrerythrin; KEGG: ckl:CKL_2032 Rbr1
YP_002505246.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: mta:Moth_1911 iron-containing alcohol dehydrogenase
YP_002505247.1	KEGG: cac:CAC3321 hypothetical protein
YP_002505248.1	PFAM: AMP-dependent synthetase and ligase; KEGG: cth:Cthe_1232 AMP-dependent synthetase and ligase
YP_002505249.1	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: ctc:CTC00443 Na+ driven multidrug efflux pump
YP_002505250.1	binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential
YP_002505251.1	PFAM: protein of unknown function DUF445; KEGG: mab:MAB_4085c hypothetical protein
YP_002505252.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: aoe:Clos_0392 cation diffusion facilitator family transporter
YP_002505253.1	PFAM: copper amine oxidase domain protein; KEGG: aoe:Clos_2285 copper amine oxidase domain-containing protein
YP_002505254.1	PFAM: rubrerythrin; Rubredoxin-type Fe(Cys)4 protein; KEGG: drm:Dred_0588 rubrerythrin
YP_002505255.1	KEGG: cbh:CLC_2757 phage integrase family site specific recombinase
YP_002505256.1	PFAM: transposase IS3/IS911 family protein; KEGG: lwe:lwe2186 transposase
YP_002505257.1	PFAM: integrase; KEGG: ckl:CKL_3445 transposase
YP_002505258.1	KEGG: mba:Mbar_A0786 hypothetical protein
YP_002505259.1	PFAM: permease; KEGG: mac:MA0366 hypothetical protein
YP_002505260.1	PFAM: major facilitator superfamily MFS_1; KEGG: pha:PSHAa1178 L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein (MFS)
YP_002505261.1	PFAM: amidohydrolase; amidohydrolase; KEGG: net:Neut_1722 N-isopropylammelide isopropylaminohydrolase
YP_002505262.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: tte:TTE1472 dehydrogenase
YP_002505264.1	PFAM: hypothetical protein; KEGG: msi:Msm_0803 metal-dependent membrane protease
YP_002505265.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ckl:CKL_1682 transcriptional regulator
YP_002505266.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ckl:CKL_1681 two component sensor kinase
YP_002505267.1	PFAM: integrase; KEGG: lpf:lpl2033 hypothetical protein
YP_002505268.1	PFAM: cellulosome protein dockerin type I; KEGG: cth:Cthe_0912 glycoside hydrolase family protein
YP_002505269.1	decatenates replicating daughter chromosomes
YP_002505270.1	PFAM: ExsB family protein; KEGG: cth:Cthe_1841 hypothetical protein
YP_002505271.1	TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: cth:Cthe_1558 BadM/Rrf2 family transcriptional regulator
YP_002505273.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: lsp:Bsph_1728 RNA polymerase sigma factor SigX
YP_002505276.1	PFAM: alkaline phosphatase; KEGG: dsy:DSY4404 hypothetical protein
YP_002505277.1	PFAM: glycoside hydrolase family 10; cellulosome protein dockerin type I; KEGG: hau:Haur_4805 glycoside hydrolase family protein
YP_002505278.1	PFAM: carbamoyl-phosphate synthase L chain ATP-binding; carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: mja:MJ1229 pyruvate carboxylase subunit A
YP_002505279.1	PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: cno:NT01CX_0927 acetyl-CoA carboxylase, biotin carboxyl carrier protein
YP_002505280.1	TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; carbamoyl-phosphate synthase L chain ATP-binding; carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: cbf:CLI_3821 biotin carboxylase
YP_002505281.1	TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, subunit beta; KEGG: efa:EF2876 acetyl-CoA carboxylase subunit beta
YP_002505282.1	TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, subunit alpha; PFAM: acetyl-CoA carboxylase subunit alpha; KEGG: ctc:CTC00135 acetyl-CoA carboxylase carboxyl transferase subunit beta/alpha
YP_002505283.1	PFAM: amine oxidase; KEGG: cpy:Cphy_1763 FAD dependent oxidoreductase
YP_002505284.1	PFAM: xylose isomerase; KEGG: atc:AGR_L_260 hypothetical protein
YP_002505285.1	KEGG: cpy:Cphy_3243 hypothetical protein
YP_002505286.1	PFAM: FAD dependent oxidoreductase; KEGG: rle:RL3853  protein involved in invasion
YP_002505287.1	PFAM: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: cpy:Cphy_2007 two component AraC family transcriptional regulator
YP_002505288.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase internal region; KEGG: cbe:Cbei_4677 integral membrane sensor signal transduction histidine kinase
YP_002505289.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: cpy:Cphy_3242 binding-protein-dependent transport systems inner membrane component
YP_002505290.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU07120 transmembrane lipoprotein
YP_002505291.1	PFAM: extracellular solute-binding protein family 1; KEGG: cpy:Cphy_3240 extracellular solute-binding protein
YP_002505292.1	PFAM: FAD dependent oxidoreductase; KEGG: rle:RL3853  protein involved in invasion
YP_002505293.1	PFAM: glucose-inhibited division protein A; HI0933 family protein; FAD dependent oxidoreductase; KEGG: tbd:Tbd_1475 hypothetical protein
YP_002505294.1	KEGG: bcl:ABC3582 hypothetical protein
YP_002505295.1	PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: ssp:SSP0524  dehydrogenase
YP_002505296.1	PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: scl:sce9297  zinc-binding dehydrogenase
YP_002505297.1	PFAM: PfkB domain protein; KEGG: tpd:Teth39_0632 ribokinase-like domain-containing protein
YP_002505298.1	PFAM: Accessory gene regulator B; KEGG: cth:Cthe_2358 accessory gene regulator B
YP_002505299.1	KEGG: ENSAPMG00000003711.
YP_002505301.1	PFAM: hypothetical protein; KEGG: tpd:Teth39_2244 XRE family transcriptional regulator
YP_002505302.1	PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: swd:Swoo_2001 methyltransferase type 11
YP_002505303.1	PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mae:Maeo_0046 radical SAM domain-containing protein
YP_002505304.1	KEGG: dsy:DSY0670 hypothetical protein
YP_002505305.1	KEGG: dsy:DSY0671 hypothetical protein
YP_002505306.1	PFAM: helicase; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: dsy:DSY0672 hypothetical protein
YP_002505307.1	TIGRFAM: non-ribosomal peptide synthase; amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: bwe:BcerKBAB4_1782 amino acid adenylation domain-containing protein
YP_002505308.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: pfu:PF1011 daunorubicin resistance ATP-binding protein DrrA
YP_002505309.1	PFAM: ABC transporter; KEGG: swd:Swoo_2004 ABC-2 type transporter
YP_002505310.1	PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: sus:acid_0877 radical SAM domain-containing protein
YP_002505311.1	PFAM: NAD-dependent epimerase/dehydratase; polysaccharide biosynthesis protein CapD; Male sterility domain; KEGG: dol:Dole_0520 NAD-dependent epimerase/dehydratase
YP_002505312.1	PFAM: nucleotidyl transferase; KEGG: dol:Dole_0521 nucleotidyl transferase
YP_002505313.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mja:MJ0211 UDP-glucose 4-epimerase (GalE)
YP_002505314.1	TIGRFAM: glycosyltransferase, MGT family; PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; glycosyltransferase 28 domain; KEGG: cbe:Cbei_1729 glycosyltransferase, MGT family
YP_002505315.1	PFAM: beta-lactamase; KEGG: bwe:BcerKBAB4_1783 cyclic peptide transporter
YP_002505316.1	PFAM: AMP-dependent synthetase and ligase; condensation domain protein; cobalamin B12-binding domain protein; phosphopantetheine-binding; radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: bwe:BcerKBAB4_1784 amino acid adenylation domain-containing protein
YP_002505317.1	PFAM: acyl transferase; KEGG: ckl:CKL_1732 PKS acyltransferase domain-containing protein
YP_002505318.1	PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; beta-ketoacyl synthase; KEGG: ckl:CKL_2355 hybrid nonribosomal peptide synthetase/polyketide synthase
YP_002505319.1	TIGRFAM: amino acid adenylation protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; aminotransferase class-III; phosphopantetheine-binding; Non-ribosomal peptide synthetase; beta-ketoacyl synthase; KEGG: cyt:cce_3073 peptide synthetase
YP_002505320.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; beta-ketoacyl synthase ; acyl transferase; KEGG: amr:AM1_A0228 beta-ketoacyl synthase
YP_002505321.1	TIGRFAM: amino acid adenylation protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; Non-ribosomal peptide synthetase; KEGG: pfo:Pfl01_2265 amino acid adenylation
YP_002505322.1	TIGRFAM: amino acid adenylation protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: npu:Npun_CR072 amino acid adenylation domain-containing protein
YP_002505323.1	PFAM: pyridoxal-dependent decarboxylase; KEGG: spc:Sputcn32_1469 pyridoxal-dependent decarboxylase
YP_002505324.1	TIGRFAM: non-ribosomal peptide synthase; amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: ava:Ava_4099 non-ribosomal peptide synthase
YP_002505325.1	PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mae:Maeo_0046 radical SAM domain-containing protein
YP_002505326.1	KEGG: dde:Dde_1603 hypothetical protein
YP_002505327.1	PFAM: phosphopantetheine-binding; KEGG: npu:Npun_R3441  D-alanyl carrier protein
YP_002505328.1	PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: npu:Npun_R3442 3-hydroxyacyl-CoA dehydrogenase, NAD-binding
YP_002505329.1	KEGG: hau:Haur_3969 hypothetical protein
YP_002505330.1	PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: npu:Npun_R3440 acyl-CoA dehydrogenase domain-containing protein
YP_002505331.1	TIGRFAM: HAD-superfamily phosphatase, subfamily IIIC; FkbH like protein; KEGG: npu:Npun_R3439 FkbH like protein
YP_002505332.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: cpy:Cphy_2734 AraC family transcriptional regulator
YP_002505333.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: csc:Csac_1725 AraC family transcriptional regulator
YP_002505334.1	PFAM: coagulation factor 5/8 type domain protein; glycoside hydrolase family 2 sugar binding; KEGG: bth:BT_4151 beta-glucuronidase
YP_002505335.1	PFAM: S-layer domain protein; Fibronectin type III domain protein; carbohydrate-binding family 9; KEGG: cth:Cthe_2195 carbohydrate-binding family 6 protein
YP_002505336.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase internal region; KEGG: cbe:Cbei_4458 histidine kinase internal region
YP_002505337.1	PFAM: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: csc:Csac_0684 response regulator receiver protein
YP_002505338.1	PFAM: extracellular solute-binding protein family 1; KEGG: gtn:GTNG_1780 sugar ABC transporter sugar-binding protein
YP_002505339.1	PFAM: protein of unknown function DUF1680; KEGG: sus:acid_1242 hypothetical protein
YP_002505340.1	PFAM: extracellular solute-binding protein family 1; KEGG: cpy:Cphy_3409 extracellular solute-binding protein
YP_002505341.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: csc:Csac_2515 binding-protein-dependent transport systems inner membrane component
YP_002505342.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: rxy:Rxyl_0623 binding-protein-dependent transport systems inner membrane component
YP_002505343.1	PFAM: helix-turn-helix- domain containing protein AraC type; cupin; KEGG: bcl:ABC0403 AraC/XylS family transcriptional regulator
YP_002505344.1	PFAM: glycoside hydrolase family 4; KEGG: bcl:ABC0412 alpha-galactosidase
YP_002505345.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: cbk:CLL_A1996 AraC-family transcriptional regulator
YP_002505346.1	PFAM: glycoside hydrolase family 31; KEGG: bvu:BVU_0491 alpha-glycosidase
YP_002505347.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: csc:Csac_1338 alanine racemase
YP_002505348.1	PFAM: carbohydrate kinase FGGY; KEGG: mta:Moth_2025 xylulokinase
YP_002505349.1	PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: cbl:CLK_2861  L-iditol 2-dehydrogenase
YP_002505350.1	PFAM: D-tagatose-bisphosphate aldolase class II accessory protein AgaZ; KEGG: sed:SeD_A3612 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit
YP_002505351.1	PFAM: aldo/keto reductase; KEGG: sus:acid_2860 aldehyde reductase
YP_002505352.1	PFAM: RbsD or FucU transport; KEGG: cpf:CPF_1050 fucose operon protein FucU
YP_002505353.1	PFAM: glycoside hydrolase family 43; KEGG: cpy:Cphy_0531 alpha-N-arabinofuranosidase
YP_002505354.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: cpy:Cphy_1546 AraC family transcriptional regulator
YP_002505355.1	PFAM: glycoside hydrolase family 42 domain 5 loop region; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 ; glycoside hydrolase family 2 sugar binding; KEGG: pin:Ping_2019 beta-D-galactosidase
YP_002505356.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: cpy:Cphy_0393 binding-protein-dependent transport systems inner membrane component
YP_002505357.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: oih:OB3208 hypothetical protein
YP_002505358.1	PFAM: extracellular solute-binding protein family 1; KEGG: cpy:Cphy_2193 extracellular solute-binding protein
YP_002505359.1	KEGG: cpy:Cphy_2189 glutaredoxin 2
YP_002505360.1	KEGG: cpy:Cphy_2188 hypothetical protein
YP_002505361.1	PFAM: transposase IS116/IS110/IS902 family protein; KEGG: tte:TTE1030 transposase
YP_002505362.1	KEGG: cpy:Cphy_0874 hypothetical protein
YP_002505363.1	KEGG: cpy:Cphy_2415 hypothetical protein
YP_002505364.1	PFAM: major facilitator superfamily MFS_1; KEGG: ade:Adeh_0552 major facilitator transporter
YP_002505365.1	TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: cdf:CD1086  peptidase
YP_002505366.1	PFAM: protein of unknown function UPF0126; KEGG: btl:BALH_4926 permease
YP_002505367.1	PFAM: extracellular solute-binding protein family 1; KEGG: cbe:Cbei_4680 extracellular solute-binding protein, family 1
YP_002505368.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: cbe:Cbei_4679 binding-protein-dependent transport systems inner membrane component
YP_002505369.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: cbe:Cbei_4678 binding-protein-dependent transport systems inner membrane component
YP_002505370.1	TIGRFAM: deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: cbe:Cbei_4143 deoxyribose-phosphate aldolase
YP_002505371.1	PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: cbl:CLK_2861  L-iditol 2-dehydrogenase
YP_002505372.1	PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: pac:PPA0918  zinc-binding sorbitol dehydrogenase
YP_002505373.1	TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: chy:CHY_1839 glycerol kinase
YP_002505374.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dth:DICTH_1536 oxidoreductase, short chain dehydrogenase/reductase family
YP_002505375.1	PFAM: L-arabinose isomerase; KEGG: gfo:GFO_0699 L-arabinose isomerase
YP_002505376.1	PFAM:  sugar-binding domain protein; KEGG: afl:Aflv_2782 transcriptional regulator of deoxyribonucleoside metabolism
YP_002505377.1	PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: stl:stu1532 glyoxalase I/lactoylglutathione lyase
YP_002505378.1	PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: gtn:GTNG_1791 alpha-L-arabinofuranosidase
YP_002505379.1	KEGG: cdf:CD2121 hypothetical protein
YP_002505380.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: cpy:Cphy_2132 ATPase, P-type (transporting), HAD superfamily, subfamily IC
YP_002505381.1	PFAM: pyridoxal-dependent decarboxylase; KEGG: mst:Msp_0329 MfnA
YP_002505382.1	KEGG: sso:SSO1759 protease
YP_002505383.1	KEGG: mbn:Mboo_1451 GHMP kinase
YP_002505384.1	PFAM: aminotransferase class I and II; KEGG: cdf:CD1549  histidinol-phosphate aminotransferase
YP_002505385.1	PFAM: haloacid dehalogenase; KEGG: cth:Cthe_1482 Cof-like hydrolase
YP_002505386.1	PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: ctc:CTC01641  transcriptional regulatory protein
YP_002505387.1	PFAM: radical SAM protein; protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB; KEGG: fnu:FN0475 MiaB protein
YP_002505388.1	PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: gme:Gmet_1705 cobalamin B12-binding/radical SAM family protein
YP_002505389.1	PFAM: chloramphenicol acetyltransferase; KEGG: cbk:CLL_A2166 chloramphenicol O-acetyltransferase
YP_002505390.1	KEGG: cdf:CD0455 hypothetical protein
YP_002505391.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: dsy:DSY0018 hypothetical protein
YP_002505392.1	PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: chy:CHY_1052 hypothetical protein
YP_002505393.1	TIGRFAM: small GTP-binding protein; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor G domain IV; protein of unknown function DUF901; KEGG: cth:Cthe_0033 small GTP-binding protein
YP_002505394.1	PFAM: dihydrouridine synthase; KEGG: cbt:CLH_1332 dihydrouridine synthase family protein
YP_002505395.1	PFAM: nitroreductase; KEGG: cbe:Cbei_0725 nitroreductase
YP_002505396.1	KEGG: cbk:CLL_A1368 hypothetical protein
YP_002505397.1	KEGG: cbk:CLL_A1370 pyridine nucleotide-disulphide oxidoreductase domain protein
YP_002505398.1	PFAM: HI0933 family protein; FAD dependent oxidoreductase; KEGG: cbk:CLL_A1369 pyridine nucleotide-disulphide oxidoreductase domain protein
YP_002505399.1	PFAM: regulatory protein TetR; KEGG: cbk:CLL_A1977 transcription regulator
YP_002505400.1	PFAM: cellulosome protein dockerin type I; KEGG: scl:sce3301 hypothetical protein
YP_002505401.1	KEGG: ckl:CKL_2028 hypothetical protein
YP_002505402.1	KEGG: cpy:Cphy_2066 hypothetical protein
YP_002505403.1	KEGG: amt:Amet_1577 hypothetical protein
YP_002505404.1	PFAM: regulatory protein ArsR; KEGG: dsy:DSY4600 hypothetical protein
YP_002505405.1	PFAM: permease; KEGG: blj:BLD_1092 hypothetical permease
YP_002505406.1	TIGRFAM: redox-active disulfide protein 2; KEGG: dsy:DSY4674 hypothetical protein
YP_002505407.1	PFAM: protein-tyrosine phosphatase, low molecular weight; KEGG: dsy:DSY4671 hypothetical protein
YP_002505408.1	PFAM: cytochrome b5; KEGG: cac:CA_P0144 steroid-binding protein
YP_002505409.1	TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: cbl:CLK_1224 [Ni/Fe] hydrogenase, small subunit
YP_002505410.1	PFAM: nickel-dependent hydrogenase large subunit; KEGG: cbb:CLD_2800 [Ni/Fe] hydrogenase, large subunit
YP_002505411.1	TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; KEGG: cac:CA_P0143 hydrogenase maturation protease subunit delta, HyaD-like
YP_002505412.1	PFAM: cupin; KEGG: cth:Cthe_2503 cupin 2, barrel
YP_002505413.1	PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: cbt:CLH_3253 transcriptional regulator
YP_002505414.1	PFAM: basic membrane lipoprotein; KEGG: cbt:CLH_3251  basic membrane lipoprotein
YP_002505415.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cbt:CLH_3250 ribose import ATP-binding protein RbsA
YP_002505416.1	PFAM: inner-membrane translocator; KEGG: cbt:CLH_3249 sugar ABC transporter permease
YP_002505417.1	PFAM: inner-membrane translocator; KEGG: cbt:CLH_3248 inner-membrane translocator
YP_002505418.1	PFAM: isochorismatase hydrolase; KEGG: cbt:CLH_3247 isochorismatase family protein
YP_002505419.1	PFAM: PfkB domain protein; KEGG: cbt:CLH_3246 kinase, PfkB family
YP_002505420.1	PFAM: purine or other phosphorylase family 1; KEGG: cbt:CLH_3244 uridine phosphorylase
YP_002505421.1	PFAM: photosystem I assembly BtpA; KEGG: cbt:CLH_3243 hypothetical protein
YP_002505422.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: cbt:CLH_3242 NADPH-dependent butanol dehydrogenase
YP_002505423.1	TIGRFAM: tryptophan synthase, subunit alpha; PFAM: tryptophan synthase alpha chain; KEGG: cbt:CLH_3241 tryptophan synthase, alpha subunit
YP_002505424.1	KEGG: chy:CHY_0611 hypothetical protein
YP_002505426.1	PFAM: protein of unknown function DUF43; KEGG: cbl:CLK_2780 hypothetical protein
YP_002505427.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rpb:RPB_2043 GCN5-related N-acetyltransferase
YP_002505428.1	TIGRFAM: HAD-superfamily phosphatase, subfamily IIIC; FkbH like protein; KEGG: npu:Npun_R3439 FkbH like protein
YP_002505429.1	KEGG: nmu:Nmul_A0275 hypothetical protein
YP_002505430.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: cac:CAC2332 dTDP-D-glucose 4,6-dehydratase
YP_002505431.1	TIGRFAM: S-adenosylmethionine decarboxylase proenzyme; PFAM: S-adenosylmethionine decarboxylase related; KEGG: mja:MJ0315 hypothetical protein
YP_002505432.1	KEGG: cth:Cthe_1933 Zn-dependent hydrolase of the beta-lactamase fold
YP_002505433.1	PFAM: methyladenine glycosylase; KEGG: lin:lin1680 hypothetical protein
YP_002505434.1	KEGG: bcs:BCAN_A0517 hypothetical protein
YP_002505436.1	PFAM: PKD domain containing protein; NHL repeat containing protein; Fibronectin type III domain protein; Kelch repeat-containing protein; Two component regulator propeller; Kelch repeat protein; KEGG: csc:Csac_0278 hypothetical protein
YP_002505437.1	TIGRFAM: methionyl-tRNA synthetase; methionyl-tRNA synthetase subunit beta; PFAM: t-RNA-binding domain protein; tRNA synthetase class I (M); KEGG: cpy:Cphy_0025 methionyl-tRNA synthetase
YP_002505438.1	PFAM: glycoside hydrolase family 5; cellulosome protein dockerin type I; KEGG: cpy:Cphy_2058 cellulase
YP_002505439.1	KEGG: cpr:CPR_0657 hypothetical protein
YP_002505440.1	PFAM: cellulosome protein dockerin type I; Spore coat protein CotH; KEGG: scl:sce0771 hypothetical protein
YP_002505441.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bfs:BF1698  ferredoxin
YP_002505442.1	PFAM: transcriptional regulator PadR family protein; KEGG: ckl:CKL_2542 transcriptional regulator
YP_002505443.1	KEGG: bwe:BcerKBAB4_2612 hypothetical protein
YP_002505444.1	PFAM: Tail Collar domain protein; KEGG: bra:BRADO4738 phage-like protein
YP_002505445.1	PFAM: Tail Collar domain protein; KEGG: bra:BRADO4738 phage-like protein
YP_002505446.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: ckl:CKL_0344 NADH oxidase
YP_002505447.1	PFAM: Domain of unknown function DUF1858; KEGG: dsy:DSY4252 hypothetical protein
YP_002505448.1	PFAM: protein of unknown function DUF1646; KEGG: tte:TTE0261 hypothetical protein
YP_002505449.1	PFAM: glycoside hydrolase family 18; peptidoglycan-binding LysM; SMART: chitinase II; KEGG: cno:NT01CX_1510 spore peptidogylcan hydrolase
YP_002505450.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: tte:TTE2486 NADH dehydrogenase, FAD-containing subunit
YP_002505451.1	PFAM: UbiA prenyltransferase; KEGG: lwe:lwe2585 1,4-dihydroxy-2-naphthoate octaprenyltransferase
YP_002505452.1	PFAM: protein of unknown function DUF1312; KEGG: cdf:CD2482  lipoprotein
YP_002505453.1	PFAM: Heptaprenyl diphosphate synthase component I; KEGG: cno:NT01CX_0720 hypothetical protein
YP_002505454.1	KEGG: aoe:Clos_0885 hypothetical protein
YP_002505455.1	PFAM: ApbE family lipoprotein; KEGG: aoe:Clos_0889 ApbE family lipoprotein
YP_002505456.1	PFAM: major facilitator superfamily MFS_1; KEGG: ckl:CKL_2256 transporter protein
YP_002505457.1	catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis
YP_002505458.1	PFAM: FRG domain protein; KEGG: hne:HNE_3339 hypothetical protein
YP_002505459.1	KEGG: cac:CAC1520 hypothetical protein
YP_002505460.1	PFAM: protein of unknown function DUF421; KEGG: cbe:Cbei_2942 protein of unknown function DUF421
YP_002505461.1	KEGG: cdf:CD1788 hypothetical protein
YP_002505462.1	PFAM: protein of unknown function DUF421; KEGG: bsu:BSU13060 hypothetical protein
YP_002505463.1	PFAM: semialdehyde dehydrogenase NAD - binding; oxidoreductase domain protein; oxidoreductase domain; homoserine dehydrogenase NAD-binding; KEGG: cac:CAC1480 dehydrogenase
YP_002505464.1	PFAM: copper amine oxidase domain protein; KEGG: nmr:Nmar_0998 hypothetical protein
YP_002505466.1	PFAM: saccharopine dehydrogenase; KEGG: cbe:Cbei_4409 saccharopine dehydrogenase
YP_002505467.1	TIGRFAM: carboxynorspermidine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: dsy:DSY3820 hypothetical protein
YP_002505468.1	KEGG: pth:PTH_1215 hypothetical protein
YP_002505469.1	PFAM: transposase IS116/IS110/IS902 family protein; KEGG: tte:TTE1030 transposase
YP_002505470.1	PFAM: extracellular solute-binding protein family 1; KEGG: cbe:Cbei_4680 extracellular solute-binding protein, family 1
YP_002505471.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: cbe:Cbei_4679 binding-protein-dependent transport systems inner membrane component
YP_002505472.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: cbe:Cbei_4678 binding-protein-dependent transport systems inner membrane component
YP_002505473.1	PFAM: extracellular solute-binding protein family 1; KEGG: csc:Csac_0692 extracellular solute-binding protein
YP_002505474.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase internal region; KEGG: cbe:Cbei_4677 integral membrane sensor signal transduction histidine kinase
YP_002505475.1	PFAM: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: cbe:Cbei_4676 response regulator receiver protein
YP_002505476.1	PFAM: glycoside hydrolase; KEGG: cbe:Cbei_3765 glycoside hydrolase, family 3 domain protein
YP_002505477.1	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) in DNA. Repairs alkylated guanine in DNA by stoichiometrically transferring the alkyl group at the O-6 position to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated
YP_002505478.1	KEGG: aoe:Clos_0866 hypothetical protein
YP_002505479.1	PFAM: radical SAM protein; KEGG: cbl:CLK_0309 radical SAM domain-containing protein
YP_002505480.1	PFAM: regulatory protein ArsR; KEGG: pth:PTH_1733 transcriptional regulator
YP_002505481.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SirA family protein; rhodanese; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: afl:Aflv_0303 multidomain redox protein (NAD(FAD)-dependent oxidoreductase; rhodanese domain; SirA-like redox domain; peroxiredoxin domain)
YP_002505482.1	KEGG: ckl:CKL_2423 hypothetical protein
YP_002505483.1	PFAM: copper amine oxidase domain protein; KEGG: cth:Cthe_0744 copper amine oxidase-like protein
YP_002505484.1	PFAM: bacitracin resistance protein BacA; KEGG: cbl:CLK_3605  undecaprenol kinase
YP_002505485.1	tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine
YP_002505486.1	PFAM: methyltransferase type 11; methyltransferase type 12; Tellurite resistance methyltransferase, TehB, core; KEGG: cth:Cthe_1959 methyltransferase type 11
YP_002505487.1	PFAM: hypothetical protein; KEGG: cth:Cthe_0049 XRE family transcriptional regulator
YP_002505488.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cbl:CLK_0187 ABC transporter ATP-binding protein
YP_002505489.1	PFAM: protein of unknown function DUF214; KEGG: cbh:CLC_0840  ABC transporter permease
YP_002505490.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cbf:CLI_0872 DNA-binding response regulator
YP_002505491.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: cbl:CLK_0191 sensor histidine kinase
YP_002505492.1	PFAM: PfkB domain protein; KEGG: ote:Oter_2311 ribokinase-like domain-containing protein
YP_002505493.1	PFAM: periplasmic solute binding protein; KEGG: cpy:Cphy_3491 periplasmic solute binding protein
YP_002505494.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ckl:CKL_0966 transcriptional regulator
YP_002505495.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ctc:CTC01804 sensory transduction protein kinase
YP_002505496.1	KEGG: ckl:CKL_0962 transporter protein
YP_002505497.1	KEGG: hmo:HM1_1647 hypothetical protein
YP_002505498.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cbb:CLD_2289 antibiotic ABC transporter ATP-binding protein
YP_002505499.1	PFAM: transposase IS3/IS911 family protein; KEGG: lwe:lwe2186 transposase
YP_002505500.1	PFAM: integrase; KEGG: ckl:CKL_3445 transposase
YP_002505501.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; 4Fe-4S ferredoxin iron-sulphur binding, conserved site; KEGG: cdf:CD2682 pyruvate-flavodoxin oxidoreductase
YP_002505502.1	KEGG: cpy:Cphy_0602 hypothetical protein
YP_002505503.1	KEGG: dsy:DSY1962 hypothetical protein
YP_002505504.1	PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: cdf:CD3255 two-component response regulator
YP_002505505.1	PFAM: rubrerythrin; KEGG: cpy:Cphy_2815 rubrerythrin
YP_002505506.1	PFAM: hypothetical protein; KEGG: sat:SYN_00515 DedA family protein
YP_002505507.1	KEGG: cth:Cthe_0055 hypothetical protein
YP_002505508.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: amt:Amet_1076 hypothetical protein
YP_002505509.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: cbl:CLK_3774 AraC family transcriptional regulator
YP_002505510.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: tpd:Teth39_2175 3-ketoacyl-(acyl-carrier-protein) reductase
YP_002505511.1	PFAM: metallophosphoesterase; 5'-nucleotidase domain protein; KEGG: pmy:Pmen_1038 metallophosphoesterase
YP_002505512.1	PFAM: transcriptional regulator PadR family protein; KEGG: lmo:lmo1213 hypothetical protein
YP_002505513.1	KEGG: cdf:CD1088 hypothetical protein
YP_002505514.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cpy:Cphy_1057 ABC transporter
YP_002505515.1	KEGG: bcy:Bcer98_3209 sodium export permease
YP_002505516.1	TIGRFAM: mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase type I; KEGG: cno:NT01CX_1588 mannose-6-phosphate isomerase, class I
YP_002505517.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cno:NT01CX_1191 ABC transporter ATP-binding protein
YP_002505518.1	KEGG: cbl:CLK_2533 ABC transporter permease
YP_002505519.1	PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: cth:Cthe_1803 cobalamin (vitamin B12) biosynthesis CbiM protein
YP_002505520.1	TIGRFAM: cobalt ABC transporter inner membrane subunit CbiQ; PFAM: cobalt transporter; KEGG: cth:Cthe_1802 cobalt ABC transporter inner membrane subunit CbiQ
YP_002505521.1	KEGG: cth:Cthe_1801 ABC transporter protein; TIGRFAM: cobalt ABC transporter ATPase; PFAM: SMC domain protein; ABC transporter; SMART: ATPase AAA
YP_002505522.1	KEGG: cth:Cthe_1015 hypothetical protein
YP_002505523.1	KEGG: dau:Daud_0289 hypothetical protein
YP_002505524.1	PFAM: hypothetical protein; Sel1 domain protein repeat-containing protein; hypothetical protein; SMART: hypothetical protein; KEGG: aoe:Clos_1403 TPR repeat-containing protein
YP_002505525.1	PFAM: aminotransferase class V; KEGG: csc:Csac_1303 aminotransferase, class V
YP_002505526.1	catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate
YP_002505527.1	PFAM: regulatory protein MarR; KEGG: cbl:CLK_1389 MarR family transcriptional regulator
YP_002505528.1	PFAM: ABC transporter transmembrane protein; ABC transporter related; SMART: ATPase AAA; KEGG: bwe:BcerKBAB4_2432 ABC transporter related
YP_002505529.1	PFAM: ABC transporter transmembrane protein; ABC transporter related; SMART: ATPase AAA; KEGG: bwe:BcerKBAB4_2433 ABC transporter related
YP_002505530.1	PFAM: conserved hypothetical protein; KEGG: cth:Cthe_3196 hypothetical protein
YP_002505531.1	PFAM: PRC-barrel domain protein; KEGG: cth:Cthe_3197 PRC-barrel domain-containing protein
YP_002505532.1	KEGG: cth:Cthe_3198 hypothetical protein
YP_002505533.1	PFAM: protein of unknown function UPF0118; KEGG: cth:Cthe_3199 hypothetical protein
YP_002505535.1	KEGG: cth:Cthe_0323 hypothetical protein
YP_002505536.1	valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain
YP_002505537.1	catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers
YP_002505538.1	PFAM: protein of unknown function DUF147; KEGG: cth:Cthe_1166 hypothetical protein
YP_002505539.1	PFAM: YbbR family protein; KEGG: cth:Cthe_1165 YbbR-like protein
YP_002505540.1	PFAM: FAD dependent oxidoreductase; KEGG: cth:Cthe_1164 FAD dependent oxidoreductase
YP_002505541.1	catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
YP_002505542.1	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
YP_002505544.1	PFAM: cellulosome protein dockerin type I; Kelch repeat-containing protein; KEGG: cth:Cthe_1398 cellulosome enzyme, dockerin type I
YP_002505545.1	PFAM: transposase IS3/IS911 family protein; KEGG: lwe:lwe2186 transposase
YP_002505546.1	PFAM: integrase; KEGG: ckl:CKL_3445 transposase
YP_002505547.1	KEGG: mac:MA1194 hypothetical protein
YP_002505548.1	PFAM: thioesterase superfamily protein; KEGG: cth:Cthe_1260 4-hydroxybenzoyl-CoA thioesterase
YP_002505549.1	PFAM: aminoglycoside phosphotransferase; KEGG: cac:CAC2572 aminoglycoside phosphotransferase
YP_002505550.1	PFAM: condensation domain protein; alcohol acetyltransferase; KEGG: mac:MA1194 hypothetical protein
YP_002505551.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: swd:Swoo_1668 short-chain dehydrogenase/reductase SDR
YP_002505552.1	PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: mex:Mext_2805 beta-ketoacyl-acyl-carrier-protein synthase I
YP_002505553.1	KEGG: sdn:Sden_3111 hypothetical protein
YP_002505554.1	PFAM: alcohol acetyltransferase; KEGG: mac:MA1194 hypothetical protein
YP_002505555.1	KEGG: cth:Cthe_0615 phenylacetate-CoA ligase
YP_002505556.1	PFAM: integrase; KEGG: lpf:lpl2033 hypothetical protein
YP_002505557.1	PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: gtn:GTNG_1791 alpha-L-arabinofuranosidase
YP_002505558.1	PFAM: regulatory protein ArsR; Helix-turn-helix type 11 domain protein; KEGG: bha:BH1869 hypothetical protein
YP_002505559.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: cbe:Cbei_4462 periplasmic binding protein/LacI transcriptional regulator
YP_002505560.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cbe:Cbei_4461 ABC transporter
YP_002505561.1	PFAM: inner-membrane translocator; KEGG: cbe:Cbei_4460 monosaccharide-transporting ATPase
YP_002505562.1	PFAM: inner-membrane translocator; KEGG: scl:sce3305 inner membrane ABC transporter permease YjfF
YP_002505563.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase internal region; KEGG: hau:Haur_2122 histidine kinase internal region
YP_002505564.1	PFAM: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: cbe:Cbei_4431 response regulator receiver protein
YP_002505565.1	PFAM: cellulosome protein dockerin type I; carbohydrate binding family 6; glycoside hydrolase family 43; SMART: cellulose binding type IV; KEGG: cth:Cthe_1271 carbohydrate-binding family 6 protein
YP_002505566.1	PFAM: glycoside hydrolase family 10; cellulosome protein dockerin type I; carbohydrate binding family 6; SMART: cellulose binding type IV; KEGG: cac:CA_P0116 xylanase
YP_002505567.1	PFAM: cellulosome protein dockerin type I; carbohydrate binding family 6; glycoside hydrolase family 43; SMART: cellulose binding type IV; KEGG: cth:Cthe_2196 carbohydrate-binding family 6 protein
YP_002505568.1	PFAM:  esterase; cellulosome protein dockerin type I; carbohydrate binding family 6; SMART: cellulose binding type IV; KEGG: cth:Cthe_2194 carbohydrate-binding family 6 protein
YP_002505569.1	PFAM: cellulosome protein dockerin type I; carbohydrate binding family 6; glycoside hydrolase family 43; SMART: cellulose binding type IV; KEGG: bfs:BF0575  glycosyl hydrolase/xylanase
YP_002505570.1	PFAM: cellulosome protein dockerin type I; carbohydrate binding family 6; glycoside hydrolase family 62; SMART: cellulose binding type IV; KEGG: cth:Cthe_2194 carbohydrate-binding family 6 protein
YP_002505571.1	PFAM: cellulosome protein dockerin type I; carbohydrate binding family 6; glycoside hydrolase family 43; SMART: cellulose binding type IV; KEGG: cth:Cthe_2196 carbohydrate-binding family 6 protein
YP_002505572.1	PFAM: cellulosome protein dockerin type I; carbohydrate-binding CenC domain protein; protein of unknown function DUF1680; SMART: beta and gamma crystallin; KEGG: sus:acid_1242 hypothetical protein
YP_002505573.1	PFAM: glycoside hydrolase clan GH-D; cellulosome protein dockerin type I; carbohydrate binding family 6; SMART: cellulose binding type IV; KEGG: cak:Caul_2129 alpha-galactosidase
YP_002505574.1	PFAM: cellulosome protein dockerin type I; carbohydrate binding family 6; SMART: cellulose binding type IV; KEGG: cth:Cthe_2197 carbohydrate-binding family 6 protein
YP_002505575.1	PFAM: cellulosome protein dockerin type I; carbohydrate binding family 6; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 ; glycoside hydrolase family 2 sugar binding; SMART: cellulose binding type IV; KEGG: cth:Cthe_2197 carbohydrate-binding family 6 protein
YP_002505576.1	PFAM: cellulosome protein dockerin type I; carbohydrate binding family 6; protein of unknown function DUF303 acetylesterase ; glycoside hydrolase family 62; SMART: cellulose binding type IV; KEGG: cth:Cthe_2194 carbohydrate-binding family 6 protein
YP_002505577.1	PFAM: coagulation factor 5/8 type domain protein; cellulosome protein dockerin type I; carbohydrate binding family 6; SMART: cellulose binding type IV; KEGG: fjo:Fjoh_4083 hypothetical protein
YP_002505578.1	PFAM: cellulosome protein dockerin type I; carbohydrate binding family 6; SMART: cellulose binding type IV; KEGG: cth:Cthe_3012 carbohydrate-binding family 6 protein
YP_002505580.1	KEGG: mhu:Mhun_0855 cytochrome C biogenesis protein, transmembrane region
YP_002505581.1	TIGRFAM: pectate lyase; PFAM: cellulosome protein dockerin type I; Pectic acid lyase; KEGG: sus:acid_1098 pectate lyase
YP_002505582.1	PFAM: pectinesterase; cellulosome protein dockerin type I; KEGG: cth:Cthe_2949 pectinesterase
YP_002505583.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cpf:CPF_0829 ABC transporter ATP-binding protein
YP_002505584.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cau:Caur_2439 ABC transporter
YP_002505585.1	PFAM: glycoside hydrolase family 9; cellulosome protein dockerin type I; KEGG: cth:Cthe_2761 glycoside hydrolase family protein
YP_002505586.1	PFAM: histidine kinase HAMP region domain protein; histidine kinase internal region; KEGG: hypothetical protein
YP_002505587.1	PFAM: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: hypothetical protein
YP_002505588.1	PFAM: extracellular solute-binding protein family 1; KEGG: gtn:GTNG_1773 peripheral protein
YP_002505589.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bcl:ABC0727 polysaccharide ABC transporter permease
YP_002505590.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH1066 hypothetical protein
YP_002505591.1	PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: bcl:ABC3371 alpha-L-arabinofuranosidase
YP_002505592.1	KEGG: bcl:ABC3370 hypothetical protein
YP_002505593.1	PFAM: glycoside hydrolase family 43; KEGG: fjo:Fjoh_3875 glycoside hydrolase family protein
YP_002505594.1	PFAM: glycoside hydrolase family 8; KEGG: bha:BH2105 xylanase Y
YP_002505595.1	PFAM: glycoside hydrolase family 39; KEGG: csc:Csac_2409 xylan 1,4-beta-xylosidase
YP_002505596.1	PFAM:  esterase; phospholipase/carboxylesterase; KEGG: csc:Csac_2407  esterase
YP_002505597.1	KEGG: ote:Oter_3211 hypothetical protein
YP_002505598.1	PFAM: protein of unknown function DUF303 acetylesterase ; glycoside hydrolase family 2 sugar binding; KEGG: csc:Csac_0206 protein of unknown function DUF303, acetylesterase
YP_002505599.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: cac:CAC3603 FadR family transcriptional regulator
YP_002505600.1	PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; KEGG: amt:Amet_0502 dihydroxy-acid dehydratase
YP_002505601.1	PFAM: dihydrodipicolinate synthetase; KEGG: cdf:CD3000  dihydrodipicolinate synthase
YP_002505602.1	TIGRFAM: cobalamin biosynthesis protein CbiM; PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: ckl:CKL_3429 cobalt transporter CbiM
YP_002505603.1	TIGRFAM: cobalt transporter; PFAM: Cobalt transport protein CbiN; KEGG: cno:NT01CX_1330 cobalt transporter CbiN
YP_002505604.1	TIGRFAM: cobalt ABC transporter inner membrane subunit CbiQ; PFAM: cobalt transporter; KEGG: cpr:CPR_0184 cobalt ABC transporter permease CbiQ
YP_002505605.1	KEGG: cpf:CPF_0188 cobalt transporter ATP-binding subunit; TIGRFAM: cobalt ABC transporter ATPase; PFAM: ABC transporter related; SMART: ATPase AAA
YP_002505606.1	TIGRFAM: cobalamin biosynthesis protein CbiD; PFAM: cobalamin (vitamin B12) biosynthesis CbiD protein; KEGG: cpy:Cphy_1374 cobalamin biosynthesis protein CbiD
YP_002505607.1	TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: cpy:Cphy_1375 precorrin-2 C20-methyltransferase
YP_002505608.1	TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: cpy:Cphy_1376 precorrin-4 C11-methyltransferase
YP_002505609.1	PFAM: cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: cpy:Cphy_1377 cobalamin (vitamin B12) biosynthesis CbiG protein
YP_002505610.1	PFAM: shikimate/quinate 5-dehydrogenase; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like; KEGG: cth:Cthe_2525 glutamyl-tRNA reductase
YP_002505611.1	TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: cpy:Cphy_1378 precorrin-3B C17-methyltransferase
YP_002505612.1	TIGRFAM: precorrin-6x reductase; siroheme synthase; PFAM: precorrin-6x reductase CbiJ/CobK; KEGG: aoe:Clos_1326 precorrin-6X reductase
YP_002505613.1	transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis
YP_002505614.1	TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; uroporphyrinogen III synthase HEM4; KEGG: cth:Cthe_2528 uroporphyrinogen-III synthase / uroporphyrinogen-III C-methyltransferase
YP_002505615.1	catalyzes the formation of porphobilinogen from 5-aminolevulinate
YP_002505616.1	TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III; KEGG: aoe:Clos_1330 glutamate-1-semialdehyde-2,1-aminomutase
YP_002505617.1	PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: ppd:Ppro_1299 cobalamin (vitamin B12) biosynthesis CbiX protein
YP_002505618.1	TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: cpy:Cphy_1379 precorrin-6x reductase
YP_002505619.1	TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: aoe:Clos_0862 cobyrinic acid a,c-diamide synthase
YP_002505620.1	catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation
YP_002505621.1	PFAM: precorrin-8X methylmutase CbiC/CobH; KEGG: cpy:Cphy_1382 precorrin-8X methylmutase CbiC/CobH
YP_002505622.1	TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; KEGG: cpy:Cphy_1110 cobalamin biosynthesis protein CobD
YP_002505623.1	PFAM: aminotransferase class I and II; Allinase-like; KEGG: cbk:CLL_A2918 threonine-phosphate decarboxylase
YP_002505624.1	related protein from Bacillus subtilis functions as methylribose kinase and functions in salvage pathway
YP_002505625.1	isomerizes methylthioribose-1-phosphate into methylthioribulose-1-phosphate; involved in methionine salvage pathway
YP_002505626.1	PFAM: class II aldolase/adducin family protein; KEGG: cpy:Cphy_1177 class II aldolase/adducin family protein
YP_002505628.1	PFAM: transposase IS116/IS110/IS902 family protein; KEGG: tte:TTE1030 transposase
YP_002505629.1	KEGG: hypothetical protein
YP_002505630.1	KEGG: bhr:BH0553 myosin family protein
YP_002505631.1	PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
YP_002505632.1	KEGG: cth:Cthe_2499 hypothetical protein
YP_002505633.1	PFAM: glycoside hydrolase family 8; cellulosome protein dockerin type I; KEGG: chu:CHU_1240 bifunctional xylanase/esterase; CBM9 module, glycoside hydrolase family 8 protein and carbohydrate esterase family 4 protein
YP_002505634.1	PFAM: transposase IS3/IS911 family protein; KEGG: cth:Cthe_0590 transposase IS3/IS911
YP_002505635.1	PFAM: Penicillinase repressor; KEGG: hmo:HM1_2921 hypothetical protein
YP_002505636.1	KEGG: ckl:CKL_2387 transcriptional regulator
YP_002505637.1	PFAM: Spore coat protein CotH; KEGG: mla:Mlab_1597 hypothetical protein
YP_002505638.1	KEGG: mla:Mlab_1595 hypothetical protein
YP_002505639.1	KEGG: cpf:CPF_1142 hypothetical protein
YP_002505640.1	PFAM: phosphoesterase PA-phosphatase related; KEGG: cno:NT01CX_1615 PAP2 family protein
YP_002505641.1	PFAM: glycosyl transferase family 2; KEGG: cth:Cthe_3094 glycosyl transferase
YP_002505642.1	KEGG: btk:BT9727_5109 hypothetical protein
YP_002505643.1	PFAM: thymidylate synthase; KEGG: chu:CHU_1289 thymidylate synthase
YP_002505644.1	PFAM: dihydrofolate reductase region; KEGG: gtn:GTNG_1670 dihydrofolate reductase
YP_002505645.1	TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; KEGG: cth:Cthe_1225 translation initiation factor 3
YP_002505646.1	PFAM: ribosomal protein L35; KEGG: cac:CAC2360 50S ribosomal protein L35
YP_002505647.1	binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit
YP_002505648.1	PFAM: UMUC domain protein DNA-repair protein; KEGG: ckl:CKL_3439 DinB
YP_002505649.1	PFAM: type IV pilus assembly PilZ; KEGG: cth:Cthe_0488 type IV pilus assembly PilZ
YP_002505650.1	PFAM: phospholipid/glycerol acyltransferase; KEGG: lip:LI0013 1-acyl-sn-glycerol-3-phosphate acyltransferase
YP_002505651.1	PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cth:Cthe_0156 radical SAM family protein
YP_002505652.1	KEGG: cth:Cthe_0157 hypothetical protein
YP_002505653.1	TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; ribonuclease E and G; KEGG: cth:Cthe_0158 ribonuclease G
YP_002505654.1	PFAM: ribosomal protein L21; KEGG: cth:Cthe_0160 50S ribosomal protein L21
YP_002505655.1	PFAM: protein of unknown function DUF464; KEGG: cth:Cthe_0161 hypothetical protein
YP_002505656.1	involved in the peptidyltransferase reaction during translation
YP_002505657.1	TIGRFAM: GTP-binding protein Obg/CgtA; PFAM: GTP-binding protein HSR1-related; GTP1/OBG sub domain protein; GTP1/OBG domain protein; KEGG: cth:Cthe_0163 GTP1/OBG subdomain-containing protein
YP_002505658.1	PFAM: protein of unknown function UPF0044; KEGG: cth:Cthe_0164 hypothetical protein
YP_002505660.1	KEGG: cth:Cthe_0165 hypothetical protein
YP_002505661.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cth:Cthe_0166 4Fe-4S ferredoxin iron-sulfur binding
YP_002505662.1	involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer
YP_002505663.1	KEGG: amt:Amet_2156 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_002505664.1	TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; KEGG: cpr:CPR_1098 dihydropteroate synthase
YP_002505665.1	TIGRFAM: dihydroneopterin aldolase; KEGG: cac:CAC2927 dihydroneopterin aldolase fused to 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase
YP_002505666.1	TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; KEGG: cno:NT01CX_0374 bifunctional folate synthesis protein
YP_002505667.1	PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; KEGG: tte:TTE0370 ATP:corrinoid adenosyltransferase
YP_002505668.1	TIGRFAM: glycogen/starch synthase, ADP-glucose type; PFAM: glycosyl transferase group 1; Starch synthase catalytic domain protein; KEGG: cth:Cthe_0282 glycogen/starch synthases, ADP-glucose type
YP_002505669.1	KEGG: cpf:CPF_1268 hypothetical protein
YP_002505670.1	KEGG: cth:Cthe_0076 hypothetical protein
YP_002505671.1	KEGG: cth:Cthe_0077 hypothetical protein
YP_002505672.1	PFAM: peptidoglycan-binding LysM; SMART: protein phosphatase 2C domain protein; KEGG: cth:Cthe_0635 protein serine/threonine phosphatases
YP_002505673.1	PFAM: propeptide PepSY amd peptidase M4; KEGG: cth:Cthe_2168 peptidase
YP_002505674.1	PFAM: stress responsive alpha-beta barrel domain protein; KEGG: drm:Dred_1344 stress responsive alpha-beta barrel domain-containing protein
YP_002505675.1	PFAM: polysaccharide deacetylase; KEGG: cth:Cthe_0175 polysaccharide deacetylase
YP_002505676.1	KEGG: cth:Cthe_0176 hypothetical protein
YP_002505678.1	TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: cth:Cthe_0178 argininosuccinate lyase
YP_002505679.1	catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming
YP_002505680.1	endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity
YP_002505681.1	plays an essential role in ATP-dependent branch migration of the Holliday junction
YP_002505682.1	promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration
YP_002505683.1	PFAM: protein of unknown function DUF208; KEGG: cth:Cthe_0183 hypothetical protein
YP_002505684.1	PFAM: cell wall hydrolase/autolysin; copper amine oxidase domain protein; KEGG: cth:Cthe_0185 cell wall hydrolase/autolysin
YP_002505685.1	KEGG: cth:Cthe_0187 hypothetical protein
YP_002505686.1	TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; KEGG: cth:Cthe_0188 ribonuclease PH
YP_002505687.1	TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein; KEGG: cth:Cthe_0189 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
YP_002505688.1	TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; KEGG: gur:Gura_2286 phosphodiesterase
YP_002505689.1	KEGG: fjo:Fjoh_0116 hypothetical protein
YP_002505690.1	KEGG: cth:Cthe_2351 hypothetical protein
YP_002505691.1	KEGG: cth:Cthe_2350 cell wall hydrolase, SleB
YP_002505692.1	PFAM: purine or other phosphorylase family 1; KEGG: reu:Reut_A3041 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
YP_002505693.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pth:PTH_0780 hypothetical protein
YP_002505694.1	PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: pth:PTH_0781 cAMP-binding proteins
YP_002505695.1	PFAM: band 7 protein; KEGG: ote:Oter_2237 band 7 protein
YP_002505696.1	KEGG: aoe:Clos_0565 hypothetical protein
YP_002505697.1	TIGRFAM: cytidyltransferase-related domain protein; nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase; KEGG: cth:Cthe_1241 nicotinate-nucleotide adenylyltransferase
YP_002505698.1	KEGG: ctc:CTC02054 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_002505699.1	KEGG: cth:Cthe_1239 hypothetical protein
YP_002505700.1	TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: cth:Cthe_1238 iojap-like protein
YP_002505701.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ctc:CTC00580 ABC transporter ATP-binding protein
YP_002505702.1	KEGG: LOC799651; similar to serine/threonine kinase 32C
YP_002505703.1	PFAM: AMP-dependent synthetase and ligase; KEGG: cth:Cthe_1232 AMP-dependent synthetase and ligase
YP_002505704.1	PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: cth:Cthe_1231 serine-type D-Ala-D-Ala carboxypeptidase
YP_002505705.1	KEGG: cth:Cthe_1230 helix-hairpin-helix repeat-containing competence protein ComEA; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; PFAM: helix-hairpin-helix motif; Competence protein ComEA helix-hairpin-helix region; SMART: DNA-binding protein
YP_002505706.1	catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr)
YP_002505707.1	TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); TGS domain protein; anticodon-binding domain protein; threonyl/alanyl tRNA synthetase SAD; KEGG: cpr:CPR_2317 threonyl-tRNA synthetase
YP_002505708.1	KEGG: cts:Ctha_0982 hypothetical protein
YP_002505709.1	KEGG: cth:Cthe_1210 hypothetical protein
YP_002505710.1	PFAM: S-layer domain protein; copper amine oxidase domain protein; KEGG: lsp:Bsph_1041  S-layer protein/N-acetylmuramoyl-L-alanine amidase
YP_002505711.1	PFAM: transposase IS3/IS911 family protein; KEGG: lwe:lwe2186 transposase
YP_002505712.1	PFAM: integrase; KEGG: ckl:CKL_3445 transposase
YP_002505714.1	KEGG: drm:Dred_3020 hypothetical protein
YP_002505715.1	KEGG: aoe:Clos_1044 hypothetical protein
YP_002505716.1	PFAM: band 7 protein; KEGG: aoe:Clos_1045 band 7 protein
YP_002505717.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: cbe:Cbei_2787 methyl-accepting chemotaxis sensory transducer
YP_002505718.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: drm:Dred_1812 ABC transporter
YP_002505719.1	PFAM: ABC transporter transmembrane protein; ABC transporter related; SMART: ATPase AAA; KEGG: cbe:Cbei_3300 ABC transporter related
YP_002505720.1	PFAM: ABC transporter transmembrane protein; ABC transporter related; SMART: ATPase AAA; KEGG: cbe:Cbei_3299 ABC transporter related
YP_002505721.1	KEGG: lsp:Bsph_2991 hypothetical protein
YP_002505722.1	KEGG: lsp:Bsph_2991 hypothetical protein
YP_002505723.1	TIGRFAM: indolepyruvate ferredoxin oxidoreductase, alpha subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; thiamine pyrophosphate protein domain protein TPP-binding; KEGG: mba:Mbar_A2988 indolepyruvate ferredoxin oxidoreductase, subunit alpha
YP_002505724.1	PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: mbu:Mbur_0761 indolepyruvate oxidoreductase subunit B
YP_002505725.1	catalyzes the formation of methylglyoxal from glycerone phosphate
YP_002505726.1	KEGG: mmp:MMP0314 coenzyme F390 synthetase
YP_002505727.1	KEGG: bha:BH2390 hypothetical protein
YP_002505728.1	PFAM: FMN-binding domain protein; KEGG: cbt:CLH_3155  lipoprotein
YP_002505729.1	KEGG: ctc:CTC01689 hypothetical protein
YP_002505730.1	KEGG: ote:Oter_1909 hypothetical protein
YP_002505731.1	KEGG: cth:Cthe_0657 hypothetical protein
YP_002505732.1	PFAM: DNA gyrase subunit B domain protein; TOPRIM domain protein; DNA topoisomerase type IIsubunit alpha B region 2 domain protein; SMART: DNA topoisomerase II; KEGG: cth:Cthe_0305 DNA topoisomerase (ATP-hydrolyzing)
YP_002505733.1	PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; KEGG: cth:Cthe_0306 DNA gyrase/topoisomerase IV, subunit A
YP_002505734.1	PFAM: integrase; KEGG: lpf:lpl2033 hypothetical protein
YP_002505735.1	KEGG: lsa:LSA1580 integral membrane protein
YP_002505736.1	PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: aoe:Clos_0898 peptidylprolyl isomerase
YP_002505737.1	PFAM: FAD dependent oxidoreductase; KEGG: hmo:HM1_1957 fad dependent oxidoreductase
YP_002505738.1	PFAM: protein of unknown function DUF1393; protein of unknown function DUF988; KEGG: cbf:CLI_3316 hypothetical protein
YP_002505739.1	Catalyzes the transfer of the phosphoribosyl moiety from 5-phospho--D-ribosyl-1-pyrophosphate (PRib-PP) to the 6-oxo-guanine and -xanthine
YP_002505740.1	PFAM: basic membrane lipoprotein; KEGG: cno:NT01CX_0401 Bmp family membrane protein
YP_002505741.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cno:NT01CX_0400 ABC transporter ATP-binding protein
YP_002505742.1	PFAM: inner-membrane translocator; KEGG: cno:NT01CX_0399 branched chain amino acid ABC transporter permease
YP_002505743.1	PFAM: inner-membrane translocator; KEGG: cno:NT01CX_0398 branched chain amino acid ABC transporter permease
YP_002505745.1	TIGRFAM: tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; KEGG: cno:NT01CX_1355 tryptophanyl-tRNA synthetase
YP_002505746.1	PFAM: protein of unknown function DUF204; KEGG: cju:C8J_0163 hypothetical protein
YP_002505747.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-subunit beta is inserted between the strands, where it probes for the presence of a lesion
YP_002505748.1	PFAM: LrgA family protein; KEGG: cbl:CLK_3512 LrgA family protein
YP_002505749.1	PFAM: LrgB family protein; KEGG: cbf:CLI_0396 LrgB-like family protein
YP_002505750.1	KEGG: cbh:CLC_1692 hypothetical protein
YP_002505751.1	PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: cth:Cthe_1265 alpha-phosphoglucomutase
YP_002505752.1	PFAM: metallophosphoesterase; KEGG: cth:Cthe_0218 metallophosphoesterase
YP_002505753.1	PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: mta:Moth_2263 metal dependent phosphohydrolase
YP_002505754.1	KEGG: bha:BH1410 hypothetical protein
YP_002505755.1	PFAM: hypothetical protein; KEGG: pmr:PMI0244 hypothetical protein
YP_002505756.1	KEGG: cpy:Cphy_3771 antifreeze protein type I
YP_002505757.1	PFAM: cyclic nucleotide-binding; KEGG: cdf:CD2170  cNMP-binding regulatory protein
YP_002505758.1	catalyzes the reduction of hydroxylamine to ammonia and water
YP_002505759.1	TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; KEGG: pmu:PM1564 MscL
YP_002505760.1	PFAM: SCP-like extracellular; KEGG: cdf:CD2681  calcium-chelating exported protein
YP_002505761.1	PFAM: zinc/iron permease; KEGG: cbf:CLI_1259 ZIP family zinc transporter
YP_002505762.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: cpy:Cphy_3256 AraC family transcriptional regulator
YP_002505763.1	PFAM: ABC transporter transmembrane protein; ABC transporter related; SMART: ATPase AAA; KEGG: lin:lin0156 hypothetical protein
YP_002505764.1	PFAM: ABC transporter transmembrane protein; ABC transporter related; SMART: ATPase AAA; KEGG: efa:EF1593 ABC transporter ATP-binding/permease
YP_002505765.1	PFAM: aldose 1-epimerase; KEGG: amt:Amet_3800 aldose 1-epimerase
YP_002505766.1	KEGG: drm:Dred_2849 hypothetical protein
YP_002505767.1	PFAM: DNA mismatch repair protein MutS domain protein; SMART: MutS III domain protein; KEGG: cpy:Cphy_1218 DNA mismatch repair protein MutS domain-containing protein
YP_002505768.1	TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: cth:Cthe_0328 peptide chain release factor 3
YP_002505769.1	SMART: ATPase AAA; KEGG: cth:Cthe_0332 phosphoribulokinase/uridine kinase
YP_002505770.1	KEGG: cth:Cthe_0336 DRTGG domain-containing protein
YP_002505771.1	TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: cth:Cthe_1222 RNA methyltransferase
YP_002505772.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: mta:Moth_2024 LacI family transcription regulator
YP_002505773.1	PFAM:  carbohydrate binding; glycosyltransferase 36; glycosyltransferase 36 associated; KEGG: csc:Csac_1090 glycosyltransferase 36
YP_002505775.1	KEGG: cpy:Cphy_0712 hypothetical protein
YP_002505776.1	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily
YP_002505777.1	TIGRFAM: phenylalanyl-tRNA synthetase subunit beta; KEGG: cbb:CLD_1411 phenylalanyl-tRNA synthetase subunit beta
YP_002505778.1	PFAM: small acid-soluble spore protein alpha/beta type; KEGG: cth:Cthe_0216 small acid-soluble spore protein, alpha/beta type
YP_002505779.1	functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family
YP_002505781.1	TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: cth:Cthe_1384 FolC bifunctional protein
YP_002505782.1	KEGG: cth:Cthe_1383 tetratricopeptide TPR_2
YP_002505783.1	PFAM: patatin; KEGG: cth:Cthe_1382 patatin
YP_002505784.1	catalyzes the formation of L-threonine from O-phospho-L-homoserine
YP_002505785.1	PFAM: amino acid-binding ACT domain protein; KEGG: cth:Cthe_1377 hypothetical protein
YP_002505786.1	PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; KEGG: cth:Cthe_1376 homoserine dehydrogenase
YP_002505787.1	PFAM: protein of unknown function DUF1393; KEGG: csc:Csac_2314 hypothetical protein
YP_002505789.1	TIGRFAM: TrpR like protein, YerC/YecD; PFAM: Trp repressor; KEGG: cth:Cthe_1388 TrpR like protein, YerC/YecD
YP_002505791.1	functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins
YP_002505793.1	catalyzes DNA-template-directed extension of the 3'-end of a DNA strand by one nucleotide at a time. Proposed to be responsible for the synthesis of the lagging strand. In the low GC gram positive bacteria this enzyme is less processive and more error prone than its counterpart in other bacteria.
YP_002505794.1	tryptophan RNA-binding attenuator protein; binds leader Trp transcript causing transcription termination
YP_002505795.1	KEGG: cth:Cthe_1262 hypothetical protein
YP_002505796.1	PFAM: thioesterase superfamily protein; KEGG: cth:Cthe_1260 4-hydroxybenzoyl-CoA thioesterase
YP_002505797.1	PFAM: CDP-alcohol phosphatidyltransferase; KEGG: cth:Cthe_1259 CDP-alcohol phosphatidyltransferase
YP_002505798.1	KEGG: cpy:Cphy_0207 hypothetical protein
YP_002505799.1	PFAM: heat shock protein DnaJ domain protein; KEGG: cno:NT01CX_1376 molecular chaperone
YP_002505800.1	KEGG: cno:NT01CX_1375 hypothetical protein
YP_002505801.1	KEGG: cth:Cthe_1017 hypothetical protein
YP_002505802.1	PFAM: hypothetical protein; Cupin 2 conserved barrel domain protein; KEGG: cth:Cthe_0552 transcriptional regulator
YP_002505803.1	PFAM: AMP-dependent synthetase and ligase; KEGG: cth:Cthe_0551 AMP-dependent synthetase and ligase
YP_002505804.1	KEGG: cth:Cthe_1014 MutS2 family protein; TIGRFAM: MutS2 family protein; PFAM: DNA mismatch repair protein MutS; Smr protein/MutS2; SMART: MutS III domain protein
YP_002505805.1	TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: cth:Cthe_1007 GTP-binding protein TypA
YP_002505806.1	PFAM: aminodeoxychorismate lyase; KEGG: cth:Cthe_1008 aminodeoxychorismate lyase
YP_002505807.1	PFAM: O-methyltransferase family 3; methyltransferase type 11; KEGG: cth:Cthe_1009 O-methyltransferase family protein
YP_002505808.1	PFAM: peptidase U32; KEGG: cth:Cthe_1010 peptidase U32
YP_002505809.1	KEGG: cbe:Cbei_4766  cell wall binding repeat-containing protein
YP_002505810.1	KEGG: drm:Dred_1002 metal dependent phosphohydrolase; TIGRFAM: CRISPR-associated helicase Cas3; metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; DEAD/DEAH box helicase; SMART: metal-dependent phosphohydrolase HD region; DEAD-like helicases
YP_002505811.1	TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; KEGG: drm:Dred_1003 CRISPR-associated Cas5 family protein
YP_002505812.1	PFAM: integrase; KEGG: lpf:lpl2033 hypothetical protein
YP_002505813.1	TIGRFAM: CRISPR-associated protein, CT1132 family; CRISPR-associated protein, Csd2 family; PFAM: CRISPR-associated protein TM1801; KEGG: drm:Dred_1005 CRISPR-associated Csd2 family protein
YP_002505814.1	TIGRFAM: CRISPR-associated protein Cas4; PFAM: protein of unknown function DUF83; KEGG: amt:Amet_1666 CRISPR-associated Cas4 family protein
YP_002505815.1	TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; KEGG: amt:Amet_1667 CRISPR-associated Cas1 family protein
YP_002505816.1	TIGRFAM: CRISPR-associated protein Cas2; PFAM: protein of unknown function DUF196; KEGG: amt:Amet_1668 CRISPR-associated Cas2 family protein
YP_002505817.1	PFAM: integrase; KEGG: afl:Aflv_2378 transposase
YP_002505818.1	PFAM: transposase IS3/IS911 family protein; KEGG: drm:Dred_1014 transposase IS3/IS911 family protein
YP_002505819.1	PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: cth:Cthe_1011 peptidoglycan glycosyltransferase
YP_002505820.1	PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
YP_002505821.1	KEGG: bcl:ABC2817 hypothetical protein
YP_002505823.1	KEGG: tte:TTE0428 hypothetical protein
YP_002505824.1	PFAM: type 3a cellulose-binding domain protein; Hyalin; KEGG: LOC587453; similar to hyalin
YP_002505825.1	KEGG: cau:Caur_2163 hypothetical protein
YP_002505826.1	PFAM: ankyrin; KEGG: ankyrin repeat protein
YP_002505827.1	KEGG: ypp:YPDSF_0215 hypothetical protein
YP_002505828.1	KEGG: bfs:BF1743 hypothetical protein
YP_002505829.1	KEGG: bsu:BSU39290 hypothetical protein
YP_002505831.1	PFAM: ATPase AAA; SMART: AAA ATPase; KEGG: gsu:GSU0972 ATPase AAA
YP_002505832.1	KEGG: mag:amb1882 hypothetical protein
YP_002505833.1	PFAM: tail sheath protein; KEGG: sgr:SGR_2066  phage tail sheath protein
YP_002505834.1	TIGRFAM: conserved hypothetical protein; KEGG: gsu:GSU0976 hypothetical protein
YP_002505835.1	KEGG: gsu:GSU0977 hypothetical protein
YP_002505836.1	KEGG: mlo:msr6553 hypothetical protein
YP_002505837.1	TIGRFAM: conserved hypothetical protein; KEGG: gsu:GSU0979 hypothetical protein
YP_002505838.1	KEGG: hypothetical protein
YP_002505839.1	KEGG: mag:amb1890 LysM domain-containing protein
YP_002505840.1	KEGG: mag:amb1891 phage protein D
YP_002505841.1	PFAM: Rhs element Vgr protein; KEGG: gsu:GSU0983 hypothetical protein
YP_002505842.1	PFAM: PAAR repeat-containing protein; KEGG: scl:sce8200 hypothetical protein
YP_002505843.1	PFAM: GPW/gp25 family protein; KEGG: gsu:GSU0986 tail lysozyme
YP_002505844.1	KEGG: noc:Noc_1865 hypothetical protein
YP_002505845.1	KEGG: npu:Npun_F1413 hypothetical protein
YP_002505846.1	TIGRFAM: phage tail protein; KEGG: npu:Npun_F1414 phage tail protein
YP_002505847.1	KEGG: bba:Bd2582 cell wall surface anchor family protein
YP_002505848.1	KEGG: npu:Npun_F1417 hypothetical protein
YP_002505849.1	KEGG: sfu:Sfum_1625 hypothetical protein
YP_002505850.1	KEGG: npu:Npun_F1417 hypothetical protein
YP_002505851.1	KEGG: predicted protein
YP_002505852.1	PFAM: protein of unknown function DUF1212; KEGG: cbl:CLK_3663 hypothetical protein
YP_002505853.1	KEGG: cbb:CLD_0282 hypothetical protein
YP_002505854.1	binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA
YP_002505855.1	PFAM: ApbE family lipoprotein; KEGG: cth:Cthe_0561 ApbE-like lipoprotein
YP_002505856.1	PFAM: protein of unknown function DUF1312; KEGG: cth:Cthe_0562 hypothetical protein
YP_002505857.1	PFAM: Heptaprenyl diphosphate synthase component I; KEGG: cth:Cthe_0563 heptaprenyl diphosphate synthase component I
YP_002505858.1	PFAM: polyprenyl synthetase; KEGG: cth:Cthe_0564 trans-hexaprenyltranstransferase
YP_002505859.1	KEGG: cth:Cthe_0566 replication restart DNA helicase PriA; TIGRFAM: primosomal protein N'; PFAM: helicase; type III restriction protein res subunit; DEAD/DEAH box helicase; SMART: DEAD-like helicases
YP_002505860.1	TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; KEGG: cth:Cthe_0567 peptide deformylase
YP_002505861.1	TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: cth:Cthe_0568 methionyl-tRNA formyltransferase
YP_002505862.1	PFAM: protein of unknown function DUF116; KEGG: cth:Cthe_0569 hypothetical protein
YP_002505863.1	PFAM: peptidase membrane zinc metallopeptidase KEGG: cth:Cthe_0570 peptidase, membrane zinc metallopeptidase
YP_002505864.1	TIGRFAM: sun protein; transcription antitermination factor NusB; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: cth:Cthe_0571 sun protein
YP_002505865.1	23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance
YP_002505866.1	PFAM: protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: cth:Cthe_0573 protein serine/threonine phosphatases
YP_002505867.1	PFAM: tyrosine protein kinase; PASTA domain containing protein; serine/threonine protein kinase-related; SMART: serine/threonine protein kinase; KEGG: cth:Cthe_0574 serine/threonine protein kinase
YP_002505868.1	TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; KEGG: cth:Cthe_0575 ribosome small subunit-dependent GTPase A
YP_002505869.1	PFAM: ribulose-phosphate 3-epimerase; KEGG: cth:Cthe_0576 ribulose-5-phosphate 3-epimerase
YP_002505870.1	TIGRFAM: thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase catalytic region; KEGG: cth:Cthe_0577 thiamine pyrophosphokinase
YP_002505871.1	PFAM: GCN5-related N-acetyltransferase; KEGG: cpy:Cphy_1822 GCN5-related N-acetyltransferase
YP_002505873.1	KEGG: dsy:DSY1230 hypothetical protein
YP_002505874.1	PFAM: transposase mutator type; KEGG: glo:Glov_3450 transposase mutator type
YP_002505875.1	PFAM: cellulosome anchoring protein cohesin region; Fibronectin type III domain protein; KEGG: hypothetical protein
YP_002505876.1	PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: swo:Swol_0724 transposase
YP_002505877.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Diverse 7TM receptor transmembrane region; KEGG: amt:Amet_1771 integral membrane sensor signal transduction histidine kinase
YP_002505878.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: amt:Amet_1770 two component transcriptional regulator
YP_002505879.1	PFAM: PKD domain containing protein; S-layer domain protein; KEGG: swo:Swol_0298 hypothetical protein
YP_002505880.1	PFAM: helix-turn-helix- domain containing protein AraC type; cupin; KEGG: cpy:Cphy_0464 AraC family transcriptional regulator
YP_002505881.1	KEGG: pmo:Pmob_0233  outer membrane protein
YP_002505882.1	PFAM: glycoside hydrolase family 18; cellulosome protein dockerin type I; SMART: chitinase II; KEGG: bcl:ABC0646 chitinase
YP_002505883.1	PFAM: glycoside hydrolase family 26; cellulosome protein dockerin type I; KEGG: cth:Cthe_0032 glycoside hydrolase family protein
YP_002505884.1	PFAM: protein of unknown function DUF1232; KEGG: cpy:Cphy_3605 hypothetical protein
YP_002505885.1	KEGG: cau:Caur_2780 endonuclease/exonuclease/phosphatase
YP_002505886.1	KEGG: cpf:CPF_1618 OB-fold nucleic acid binding domain-containing protein
YP_002505887.1	PFAM: phosphoesterase PA-phosphatase related; KEGG: tpd:Teth39_0213 phosphoesterase, PA-phosphatase related
YP_002505888.1	SMART: regulatory protein ArsR; KEGG: ccv:CCV52592_2058 ArsR family transcriptional regulator
YP_002505889.1	PFAM: glutamate--cysteine ligase; KEGG: cac:CAC1539 gamma-glutamylcysteine synthetase
YP_002505890.1	KEGG: cac:CAC1540 hypothetical protein
YP_002505891.1	PFAM: integrase; KEGG: afl:Aflv_2378 transposase
YP_002505892.1	PFAM: transposase IS3/IS911 family protein; KEGG: drm:Dred_1014 transposase IS3/IS911 family protein
YP_002505893.1	PFAM: small acid-soluble spore protein alpha/beta type; KEGG: ckl:CKL_3529 small acid-soluble spore protein
YP_002505894.1	PFAM: mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2; KEGG: cac:CAC2325 N-acetylglucosaminidase domain- and ChW repeat-containing cell wall hydrolase
YP_002505895.1	KEGG: hypothetical protein
YP_002505897.1	PFAM: hypothetical protein; KEGG: ckl:CKL_3317 transcriptional regulator
YP_002505898.1	PFAM: replication initiation factor; KEGG: efa:EF2528 Cro/CI family transcriptional regulator
YP_002505904.1	KEGG: ppd:Ppro_1760 hypothetical protein
YP_002505905.1	PFAM: integrase; KEGG: ckl:CKL_3445 transposase
YP_002505906.1	PFAM: transposase IS3/IS911 family protein; KEGG: lwe:lwe2186 transposase
YP_002505908.1	PFAM: hypothetical protein; KEGG: ckl:CKL_3317 transcriptional regulator
YP_002505909.1	PFAM: replication initiation factor; KEGG: efa:EF2528 Cro/CI family transcriptional regulator
YP_002505915.1	KEGG: ppd:Ppro_1760 hypothetical protein
YP_002505916.1	PFAM: integrase; KEGG: ckl:CKL_3445 transposase
YP_002505917.1	PFAM: transposase IS3/IS911 family protein; KEGG: lwe:lwe2186 transposase
YP_002505919.1	PFAM: hypothetical protein; KEGG: ckl:CKL_3317 transcriptional regulator
YP_002505920.1	PFAM: replication initiation factor; KEGG: efa:EF2528 Cro/CI family transcriptional regulator
YP_002505926.1	KEGG: ppd:Ppro_1760 hypothetical protein
YP_002505927.1	PFAM: integrase; KEGG: ckl:CKL_3445 transposase
YP_002505928.1	PFAM: transposase IS3/IS911 family protein; KEGG: lwe:lwe2186 transposase
YP_002505929.1	PFAM: glycoside hydrolase clan GH-D; cellulosome protein dockerin type I; KEGG: aba:acid345_1677 alpha-galactosidase
YP_002505930.1	KEGG: sat:SYN_00482 molybdopterin-guanine dinucleotide biosynthesis protein A
YP_002505931.1	TIGRFAM: NifC-like ABC-type porter; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: cac:CAC0280 molybdate ABC transporter permease
YP_002505932.1	TIGRFAM: molybdenum ABC transporter periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: cac:CAC0281 molybdate-binding periplasmic protein
YP_002505933.1	TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; KEGG: dau:Daud_1891 molybdenum cofactor synthesis domain-containing protein
YP_002505934.1	PFAM: MOSC domain containing protein; KEGG: tye:THEYE_A1201 MOSC domain protein
YP_002505935.1	TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: dsy:DSY3965 hypothetical protein
YP_002505936.1	KEGG: drm:Dred_2268 molybdenum cofactor biosynthesis protein A; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: radical SAM domain protein; molybdenum cofactor synthesis protein; SMART: Elongator protein 3/MiaB/NifB
YP_002505937.1	TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: nth:Nther_1267 molybdopterin-guanine dinucleotide biosynthesis protein B
YP_002505938.1	TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: sat:SYN_00272 molybdopterin biosynthesis MoeA protein
YP_002505939.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; electron transfer flavoprotein alpha/beta-subunit ; electron transfer flavoprotein subunit alpha; KEGG: cno:NT01CX_1204 electron transfer flavoprotein, subunit alpha
YP_002505940.1	PFAM: electron transfer flavoprotein alpha/beta-subunit; KEGG: cno:NT01CX_1205 electron transfer flavoprotein subunit beta
YP_002505941.1	PFAM: regulatory protein MarR; KEGG: bca:BCE_A0172 MarR family transcriptional regulator protein
YP_002505942.1	PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: paa:Paes_1634 nitrogenase cofactor biosynthesis protein NifB
YP_002505943.1	TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; KEGG: tye:THEYE_A0933 dihydrodipicolinate synthase
YP_002505944.1	PFAM: aminotransferase class-III; KEGG: reu:Reut_A2723 bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein
YP_002505946.1	PFAM: oxidoreductase/nitrogenase component 1; KEGG: ckl:CKL_1743 VnfN
YP_002505947.1	PFAM: oxidoreductase/nitrogenase component 1; KEGG: mac:MA1631 nitrogenase associated protein E
YP_002505948.1	PFAM: NifH/frxC-family protein; KEGG: csc:Csac_2466 nitrogenase iron protein
YP_002505949.1	PFAM: GCN5-related N-acetyltransferase; KEGG: ton:TON_1418 ribosomal protein-alanine acetyltransferase
YP_002505950.1	catalyzes the formation of 3-deoxy-D-aribino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate and the formation of prephenate from chorismate
YP_002505951.1	KEGG: chy:CHY_0557 hypothetical protein
YP_002505952.1	KEGG: mar:MAE_56560 bacilysin biosynthesis protein BacA-like protein
YP_002505953.1	TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein; KEGG: hhe:HH1135 3-isopropylmalate dehydratase
YP_002505954.1	TIGRFAM: homoaconitate hydratase family protein; 3-isopropylmalate dehydratase; PFAM: aconitate hydratase domain protein; KEGG: tye:THEYE_A0867 3-isopropylmalate dehydratase, large subunit
YP_002505955.1	PFAM: cupin; KEGG: bte:BTH_II0571 pectin degradation protein KdgF
YP_002505956.1	PFAM: pyruvate carboxyltransferase; KEGG: mth:MTH1630 trans-homoaconitate synthase
YP_002505957.1	PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: chy:CHY_1732 acyl-CoA dehydrogenase
YP_002505958.1	PFAM: AMP-dependent synthetase and ligase; KEGG: vpa:VP2425  long-chain-fatty-acid-CoA ligase
YP_002505960.1	KEGG: cac:CA_P0134 hypothetical protein
YP_002505961.1	KEGG: cpr:CPR_1477 PP-loop family protein
YP_002505962.1	TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: dde:Dde_1431 amino acid ABC transporter permease
YP_002505963.1	TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: dde:Dde_1430 amino acid ABC transporter permease
YP_002505964.1	PFAM: extracellular solute-binding protein family 3; ABC transporter related; SMART: ATPase AAA; KEGG: tth:TTC0795 amino acid ABC transporter ATP-binding protein
YP_002505965.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: dsy:DSY4615  anaerobic dehydrogenase
YP_002505966.1	PFAM: extracellular solute-binding protein family 3; KEGG: dde:Dde_2764 extracellular solute-binding protein
YP_002505967.1	KEGG: cth:Cthe_1362 NusG antitermination factor
YP_002505968.1	KEGG: cth:Cthe_0351 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_002505969.1	TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; KEGG: oan:Oant_4070 dihydroxyacetone kinase, L subunit
YP_002505970.1	PFAM: Dak kinase; KEGG: smd:Smed_3823 glycerone kinase
YP_002505971.1	TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: ribose/galactose isomerase; KEGG: msu:MS0383 RpiB protein
YP_002505972.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pmr:PMI3007 short chain dehydrogenase
YP_002505973.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: vei:Veis_2044 periplasmic binding protein/LacI transcriptional regulator
YP_002505974.1	PFAM: inner-membrane translocator; KEGG: dac:Daci_4580 monosaccharide-transporting ATPase
YP_002505975.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bha:BH2322 sugar ABC transporter ATP-binding protein
YP_002505976.1	PFAM: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: cbe:Cbei_4431 response regulator receiver protein
YP_002505977.1	PFAM: histidine kinase HAMP region domain protein; histidine kinase internal region; KEGG: csc:Csac_2551 integral membrane sensor signal transduction histidine kinase
YP_002505978.1	PFAM: integral membrane protein TerC; KEGG: ckl:CKL_2793 hypothetical protein
YP_002505979.1	PFAM: glycoside hydrolase family 9; type 3a cellulose-binding domain protein; cellulosome protein dockerin type I; KEGG: cth:Cthe_2760 glycoside hydrolase family protein
YP_002505980.1	PFAM: protein of unknown function DUF81; KEGG: tte:TTE0100 permease
YP_002505981.1	PFAM: protein of unknown function DUF1634; KEGG: tte:TTE0099 hypothetical protein
YP_002505982.1	TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: pna:Pnap_4548 40-residue YVTN family beta-propeller repeat protein
YP_002505983.1	PFAM: NLP/P60 protein; KEGG: tte:TTE0880 cell wall-associated hydrolase (invasion-associated proteins)
YP_002505984.1	KEGG: cbe:Cbei_2773 hypothetical protein
YP_002505985.1	site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs
YP_002505986.1	PFAM: cellulosome protein dockerin type I; KEGG: sus:acid_0258 hypothetical protein
YP_002505987.1	PFAM: cellulosome protein dockerin type I; carbohydrate binding family 6; SMART: cellulose binding type IV; Parallel beta-helix repeat; KEGG: cth:Cthe_2195 carbohydrate-binding family 6 protein
YP_002505988.1	KEGG: dsy:DSY1199 hypothetical protein
YP_002505989.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: dsy:DSY1198 hypothetical protein
YP_002505990.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pth:PTH_2684 signal transduction histidine kinase
YP_002505991.1	PFAM: cytochrome C biogenesis protein transmembrane region; KEGG: cth:Cthe_1948 cytochrome C biogenesis protein, transmembrane region
YP_002505992.1	PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; electron transporter SCO1/SenC; Redoxin domain protein; thioredoxin domain; KEGG: cth:Cthe_1947 redoxin
YP_002505993.1	PFAM: major facilitator superfamily MFS_1; KEGG: cbe:Cbei_3888 major facilitator superfamily MFS_1
YP_002505994.1	PFAM: ROK family protein; KEGG: bcl:ABC1130 transcriptional regulator
YP_002505996.1	PFAM: radical SAM protein; KEGG: tye:THEYE_A0807 radical SAM protein
YP_002505997.1	PFAM: transposase IS3/IS911 family protein; KEGG: cth:Cthe_0590 transposase IS3/IS911
YP_002505998.1	PFAM: transposase IS200-family protein; KEGG: sha:SH2597 IS605/IS200-like transposase
YP_002505999.1	PFAM: transposase IS200-family protein; KEGG: dsy:DSY1392 hypothetical protein
YP_002506000.1	PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: cpr:CPR_0435 BFD-like iron-sulfur cluster-binding protein
YP_002506001.1	PFAM: glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 ; glycoside hydrolase family 2 sugar binding; KEGG: cpe:CPE0147 beta-D-glucuronidase
YP_002506002.1	PFAM: PfkB domain protein; KEGG: cpy:Cphy_0227 ribokinase-like domain-containing protein
YP_002506003.1	TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; KEGG: cpy:Cphy_0054 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase
YP_002506004.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cpe:CPE0149 D-mannonate oxidoreductase
YP_002506005.1	catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate
YP_002506006.1	TIGRFAM: sugar (glycoside-Pentoside-Hexuronide) transporter; PFAM: major facilitator superfamily MFS_1; KEGG: cpe:CPE0153 glucuronide permease
YP_002506007.1	PFAM: glucuronate isomerase; KEGG: csc:Csac_1949 glucuronate isomerase
YP_002506008.1	PFAM: DSBA oxidoreductase; KEGG: cpy:Cphy_1656 DsbA oxidoreductase
YP_002506009.1	PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: lsl:LSL_1782 Crp family transcriptional regulator
YP_002506010.1	SMART: hypothetical protein; KEGG: vpa:VPA0765  glutamate synthetase
YP_002506011.1	catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate
YP_002506012.1	PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: cth:Cthe_1060 AIR synthase related protein-like protein
YP_002506013.1	KEGG: cth:Cthe_1061 hypothetical protein
YP_002506014.1	TIGRFAM: thiamine biosynthesis/tRNA modification protein ThiI; PFAM: thiamine biosynthesis protein; THUMP domain protein; ExsB family protein; KEGG: cth:Cthe_1063 thiamine biosynthesis/tRNA modification protein ThiI
YP_002506015.1	PFAM: aminotransferase class V; KEGG: cth:Cthe_1064 aminotransferase, class V
YP_002506016.1	KEGG: cbl:CLK_1174 hypothetical protein
YP_002506017.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: rci:RCIX2382 hydrogenase, small subunit-like protein (HycG-like)
YP_002506018.1	PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: rci:RCIX2383 hydrogenase, large subunit-like protein (HycE-like)
YP_002506019.1	PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rci:RCIX2384 hydrogenase, membrane subunit 1-like protein (EchA-like)
YP_002506020.1	KEGG: rci:RCIX2385 hydrogenase, membrane subunit 2-like protein
YP_002506021.1	KEGG: rpd:RPD_3854 respiratory-chain NADH dehydrogenase, subunit 1
YP_002506022.1	PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rci:RCIX2387 hydrogenase, membrane subunit 4-like protein (HycC-like)
YP_002506023.1	PFAM: peptidoglycan-binding LysM; KEGG: cth:Cthe_0772 peptidoglycan-binding LysM
YP_002506024.1	TIGRFAM: LexA repressor; PFAM: LexA DNA-binding domain protein; peptidase S24 and S26 domain protein; KEGG: cth:Cthe_0773 SOS-response transcriptional repressor, LexA
YP_002506025.1	TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; KEGG: cth:Cthe_0774 RNA chaperone Hfq
YP_002506026.1	IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity
YP_002506027.1	TIGRFAM: DNA mismatch repair protein MutL; PFAM: ATP-binding region ATPase domain protein; DNA mismatch repair protein domain protein; MutL dimerisation; KEGG: cth:Cthe_0776 DNA mismatch repair protein MutL
YP_002506028.1	This protein performs the mismatch recognition step during the DNA repair process
YP_002506029.1	KEGG: cth:Cthe_0778 hypothetical protein
YP_002506030.1	KEGG: cth:Cthe_0783 RNA modification protein; TIGRFAM: RNA modification enzyme, MiaB family; tRNA-i(6)A37 thiotransferase enzyme MiaB; PFAM: deoxyribonuclease/rho motif-related TRAM; radical SAM domain protein; protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB
YP_002506031.1	PFAM: GCN5-related N-acetyltransferase; KEGG: csc:Csac_1138 GCN5-related N-acetyltransferase
YP_002506032.1	PFAM: thioesterase superfamily protein; KEGG: cph:Cpha266_1470 hypothetical protein
YP_002506033.1	KEGG: dau:Daud_0830 hypothetical protein
YP_002506034.1	PFAM: peptidase S14 ClpP; KEGG: cth:Cthe_1097 ATP-dependent Clp protease proteolytic subunit ClpP
YP_002506035.1	involved in production of dipicolinic acid (pyridine-2,6-dicarboxylic acid, DPA) which is synthesized late in sporulation in the mother cell and accumulates in the spore; mutations in this gene result in a lack of DPA synthesis; presumably functions with SpoVFA to form the synthase enzyme
YP_002506036.1	catalyzes the synthesis of dipicolinic acid from dihydroxydipicolinic acid; plays a role in spore heat resistance
YP_002506037.1	PFAM: peptidase M16 domain protein; KEGG: cth:Cthe_0419 peptidase M16-like protein
YP_002506038.1	PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH type 1 domain protein; Exoribonuclease, phosphorolytic domain 2; polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; SMART: KH domain protein; KEGG: cth:Cthe_0418 polynucleotide phosphorylase/polyadenylase
YP_002506039.1	PFAM: ribosomal protein S15; KEGG: cth:Cthe_0417 30S ribosomal protein S15
YP_002506040.1	PFAM: ATPase associated with various cellular activities AAA_3; ATPase AAA; KEGG: cth:Cthe_1054 ATPase
YP_002506041.1	PFAM: protein of unknown function DUF58; KEGG: cth:Cthe_1055 hypothetical protein
YP_002506042.1	PFAM: transglutaminase; KEGG: cth:Cthe_1056 transglutaminase-like protein
YP_002506043.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: tde:TDE2471 hypothetical protein
YP_002506044.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: cth:Cthe_1846 periplasmic sensor signal transduction histidine kinase
YP_002506045.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cth:Cthe_1847 two component transcriptional regulator
YP_002506046.1	TIGRFAM: copper ion binding protein; PFAM: Heavy metal transport/detoxification protein; KEGG: cth:Cthe_0738 copper ion binding protein
YP_002506047.1	KEGG: cth:Cthe_1850 hypothetical protein
YP_002506048.1	TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: cth:Cthe_0727 cell envelope-related transcriptional attenuator
YP_002506049.1	PFAM: copper amine oxidase domain protein; KEGG: cpo:COPRO5265_1378  branched chain amino acid ABC transporter substrate-binding protein
YP_002506050.1	PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein; KEGG: csc:Csac_2307 2-alkenal reductase
YP_002506051.1	KEGG: mgi:Mflv_2011 hypothetical protein
YP_002506052.1	PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: cdf:CD0487  carbon-nitrogen hydrolase
YP_002506053.1	PFAM: protein of unknown function DUF711; KEGG: cth:Cthe_0410 hypothetical protein
YP_002506054.1	ACT domain-containing protein
YP_002506055.1	PFAM: radical SAM protein; KEGG: aoe:Clos_0640 radical SAM domain-containing protein
YP_002506056.1	KEGG: drm:Dred_1283 hypothetical protein
YP_002506057.1	UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation
YP_002506058.1	PFAM: MCP methyltransferase CheR-type; KEGG: cth:Cthe_0717 MCP methyltransferase, CheR-type
YP_002506059.1	these proteins appear to have resulted from a fusion of lytB and rpsA; catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway
YP_002506060.1	TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; KEGG: cth:Cthe_0712 cytidylate kinase
YP_002506061.1	TIGRFAM: chorismate mutase; PFAM: chorismate mutase of the AroH class; KEGG: cth:Cthe_0711 chorismate mutase
YP_002506062.1	KEGG: cth:Cthe_0710 hypothetical protein
YP_002506063.1	KEGG: cth:Cthe_0709 hypothetical protein
YP_002506064.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; KEGG: cth:Cthe_0708 FAD dependent oxidoreductase
YP_002506065.1	PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: cth:Cthe_0706 RpiR family transcriptional regulator
YP_002506066.1	KEGG: cth:Cthe_0704 hypothetical protein
YP_002506067.1	Converts oxaloacetate to phosphoenolpyruvate using ATP as an energy source
YP_002506068.1	PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: cth:Cthe_0700 biotin/lipoyl attachment protein
YP_002506069.1	PFAM: carboxyl transferase; KEGG: cth:Cthe_0699 carboxyl transferase
YP_002506070.1	heat shock-induced
YP_002506071.1	KEGG: cth:Cthe_0316 PA14
YP_002506072.1	PFAM:  rRNA methylase; KEGG: cth:Cthe_0696  rRNA methylase
YP_002506073.1	KEGG: bsu:BSU36610 hypothetical protein
YP_002506074.1	PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: cth:Cthe_0693 ribosomal large subunit pseudouridine synthase B
YP_002506075.1	TIGRFAM: sporulation protein YtfJ; PFAM: sporulation protein YtfJ; KEGG: cth:Cthe_0691 hypothetical protein
YP_002506076.1	KEGG: cth:Cthe_0690 hypothetical protein
YP_002506077.1	TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: cth:Cthe_0688 condensin subunit ScpB
YP_002506078.1	PFAM: chromosome segregation and condensation protein ScpA; KEGG: cth:Cthe_0687 condensin subunit ScpA
YP_002506079.1	PFAM: peptidase M50; KEGG: ckl:CKL_2813 protease
YP_002506080.1	PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: cth:Cthe_0679 serine-type D-Ala-D-Ala carboxypeptidase
YP_002506081.1	TIGRFAM: pyrimidine-nucleoside phosphorylase; PFAM: glycosyl transferase family 3; Pyrimidine nucleoside phosphorylase domain; glycosyl transferase, family 3-like; KEGG: aoe:Clos_1589 pyrimidine-nucleoside phosphorylase
YP_002506082.1	TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase; KEGG: cth:Cthe_0676 tyrosine recombinase XerD subunit
YP_002506083.1	TIGRFAM: stage II sporulation protein M; PFAM: protein of unknown function DUF95 transmembrane; KEGG: cth:Cthe_0675 hypothetical protein
YP_002506084.1	PFAM: NUDIX hydrolase; KEGG: cth:Cthe_0674 NUDIX hydrolase
YP_002506085.1	An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids
YP_002506086.1	TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: cth:Cthe_0672 pyrroline-5-carboxylate reductase
YP_002506087.1	KEGG: csc:Csac_2054 phenylacetate--CoA ligase
YP_002506088.1	KEGG: gsu:GSU0226 L-lactate permease
YP_002506089.1	KEGG: hypothetical protein with 4 transmembrane domains near    carboxy terminus
YP_002506090.1	PFAM: beta-lactamase; RNA-metabolising metallo-beta-lactamase; KEGG: cth:Cthe_0611 RNA-metabolising metallo-beta-lactamase
YP_002506091.1	PFAM: peptidase M20; peptidase M42 family protein; KEGG: cth:Cthe_0609 peptidase M42
YP_002506092.1	PFAM: peptidase M42 family protein; KEGG: cth:Cthe_0608 peptidase M42
YP_002506093.1	PFAM: peptidase M18 aminopeptidase I; peptidase M20; peptidase M42 family protein; KEGG: cth:Cthe_0607 peptidase M42
YP_002506095.1	KEGG: tte:TTE2526 ABC-type dipeptide/oligopeptide/nickel transporter, ATPase component; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA
YP_002506096.1	KEGG: tte:TTE2525 ABC-type dipeptide/oligopeptide/nickel transporter, ATPase component; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA
YP_002506097.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: cpr:CPR_2256 oligopeptide ABC transporter permease component
YP_002506098.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: cac:CAC0177 oligopeptide transport permease
YP_002506099.1	PFAM: extracellular solute-binding protein family 5; KEGG: tpd:Teth39_0202 extracellular solute-binding protein
YP_002506100.1	PFAM: ABC transporter transmembrane protein; ABC transporter related; SMART: ATPase AAA; KEGG: aoe:Clos_1946 ABC transporter related
YP_002506101.1	PFAM: ABC transporter transmembrane protein; ABC transporter related; SMART: ATPase AAA; KEGG: aoe:Clos_1945 ABC transporter related
YP_002506102.1	PFAM: protein of unknown function DUF795; KEGG: cth:Cthe_1301 hypothetical protein
YP_002506103.1	PFAM: beta-lactamase; RNA-metabolising metallo-beta-lactamase; KEGG: cth:Cthe_1302 hypothetical protein
YP_002506104.1	PFAM: glycosyl transferase group 1; KEGG: cth:Cthe_1303 glycosyl transferase, group 1
YP_002506105.1	TIGRFAM: recombination helicase AddA; PFAM: UvrD/REP helicase; KEGG: cth:Cthe_2039 DNA helicase/exodeoxyribonuclease V, subunit A
YP_002506106.1	TIGRFAM: ATP-dependent nuclease subunit B; KEGG: cth:Cthe_2040 DNA helicase/exodeoxyribonuclease V, subunit B
YP_002506107.1	PFAM: hypothetical protein; KEGG: bay:RBAM_037910 YyaK
YP_002506108.1	PFAM: CoA-binding protein; KEGG: cth:Cthe_2077 CoA-binding protein
YP_002506109.1	PFAM: amine oxidase; KEGG: cpy:Cphy_2915 amine oxidase
YP_002506110.1	TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: tex:Teth514_0924 thioredoxin reductase
YP_002506111.1	PFAM: CBS domain containing protein; KEGG: cth:Cthe_2352 signal-transduction protein
YP_002506112.1	PFAM: regulatory protein MerR; TipAS antibiotic-recognition domain protein; KEGG: dsy:DSY4240 hypothetical protein
YP_002506113.1	KEGG: cbb:CLD_3728 rubrerythrin family protein
YP_002506114.1	PFAM: peptidoglycan-binding protein; ErfK/YbiS/YcfS/YnhG family protein; KEGG: cac:CAC2416 peptidoglycan-binding domain-containing protein
YP_002506115.1	Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5)
YP_002506116.1	TIGRFAM: pantoate/beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase; KEGG: cbl:CLK_3626 pantoate--beta-alanine ligase
YP_002506117.1	catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate
YP_002506118.1	KEGG: efa:EF1861 hypothetical protein
YP_002506119.1	Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_002506120.1	TIGRFAM: DNA-directed RNA polymerase subunit omega; PFAM: RNA polymerase Rpb6; KEGG: cth:Cthe_1314 DNA-directed RNA polymerase, omega subunit
YP_002506121.1	Essential for recycling GMP and indirectly, cGMP
YP_002506122.1	PFAM: protein of unknown function DUF370; KEGG: cth:Cthe_1316 hypothetical protein
YP_002506123.1	PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: cth:Cthe_1317 hypothetical protein
YP_002506124.1	PFAM: response regulator receiver; KEGG: cth:Cthe_1318 response regulator receiver protein
YP_002506125.1	PFAM: protein of unknown function DUF558; KEGG: cth:Cthe_1319 hypothetical protein
YP_002506126.1	methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype
YP_002506127.1	chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion
YP_002506128.1	heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria
YP_002506129.1	PFAM: GrpE protein; KEGG: cth:Cthe_1323 GrpE protein
YP_002506130.1	TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: negative regulator of class I heat shock protein; KEGG: cth:Cthe_1324 heat-inducible transcription repressor HrcA
YP_002506131.1	KEGG: cth:Cthe_1220 hypothetical protein
YP_002506132.1	PFAM: aminotransferase class IV; KEGG: cno:NT01CX_1857 branched-chain amino acid aminotransferase
YP_002506133.1	PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: cth:Cthe_2359 metal dependent phosphohydrolase
YP_002506134.1	KEGG: gur:Gura_0243 metal-dependent phosphohydrolase; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_002506135.1	KEGG: bay:RBAM_013480 hypothetical protein
YP_002506136.1	KEGG: bay:RBAM_037190 YycO
YP_002506137.1	PFAM: sulfatase; KEGG: cpy:Cphy_0635 sulfatase
YP_002506138.1	KEGG: cbe:Cbei_4413 hypothetical protein
YP_002506139.1	PFAM: cellulosome protein dockerin type I; KEGG: cth:Cthe_1890 cellulosome enzyme, dockerin type I
YP_002506140.1	PFAM: transposase IS116/IS110/IS902 family protein; KEGG: tte:TTE1030 transposase
YP_002506141.1	PFAM: glycosyl transferase family 2; KEGG: mbu:Mbur_2229 glycosyl transferase
YP_002506142.1	PFAM: endonuclease/exonuclease/phosphatase; KEGG: sgr:SGR_2286 hypothetical protein
YP_002506143.1	PFAM: glycosyl transferase family 2; KEGG: sma:SAV_835 glycosyltransferase
YP_002506144.1	PFAM: aminotransferase class-III; KEGG: bmc:BAbS19_II03620 aminotransferase class-III
YP_002506145.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: rca:Rcas_0368 NAD-dependent epimerase/dehydratase
YP_002506146.1	PFAM: glycosyl transferase family 2; KEGG: sgr:SGR_2292  sugar transferase
YP_002506147.1	PFAM: polysaccharide biosynthesis protein; KEGG: mmz:MmarC7_1361 polysaccharide biosynthesis protein
YP_002506148.1	PFAM: UbiA prenyltransferase; KEGG: cth:Cthe_2690 phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase
YP_002506149.1	PFAM: transposase IS200-family protein; KEGG: dsy:DSY1392 hypothetical protein
YP_002506150.1	PFAM: integrase; KEGG: lpf:lpl2033 hypothetical protein
YP_002506152.1	PFAM: integrase; KEGG: afl:Aflv_2378 transposase
YP_002506153.1	PFAM: transposase IS3/IS911 family protein; KEGG: drm:Dred_1014 transposase IS3/IS911 family protein
YP_002506155.1	TIGRFAM: DNA binding domain protein, excisionase family; KEGG: azo:azo3490 hypothetical protein
YP_002506156.1	KEGG: aby:ABAYE0548 NAD-dependent DNA ligase
YP_002506157.1	PFAM: transposase IS3/IS911 family protein; KEGG: drm:Dred_1014 transposase IS3/IS911 family protein
YP_002506158.1	PFAM: integrase; KEGG: afl:Aflv_2378 transposase
YP_002506160.1	PFAM: RelA/SpoT domain protein; KEGG: esi:Exig_1629 RelA/SpoT domain-containing protein
YP_002506161.1	PFAM: integrase; KEGG: lpf:lpl2033 hypothetical protein
YP_002506162.1	KEGG: cth:Cthe_0517 hypothetical protein
YP_002506163.1	PFAM: IS66 Orf2 family protein; KEGG: cth:Cthe_0516 IS66 Orf2 like
YP_002506164.1	PFAM: transposase IS66; KEGG: cth:Cthe_0515 transposase IS66
YP_002506165.1	PFAM: 20S proteasome A and subunit betas
YP_002506166.1	PFAM: integrase; KEGG: lpf:lpl2033 hypothetical protein
YP_002506167.1	PFAM: peptidase U35 phage prohead HK97; KEGG: bce:BC2586 phage prohead protease
YP_002506168.1	KEGG: hypothetical protein
YP_002506169.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; KEGG: hmo:HM1_0052 hypothetical protein
YP_002506173.1	KEGG: cbf:CLI_3296 hypothetical protein
YP_002506174.1	KEGG: ckl:CKL_2947 hypothetical protein
YP_002506175.1	KEGG: bat:BAS0421 prophage LambdaBa04, DNA binding protein
YP_002506176.1	KEGG: cdf:CD0846 hypothetical protein
YP_002506177.1	PFAM: integrase family protein; KEGG: ckl:CKL_2943 integrase-related protein
YP_002506178.1	PFAM: integrase; KEGG: lpf:lpl2033 hypothetical protein
YP_002506179.1	TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase type 3; KEGG: cac:CAC2941 HAD family phosphatase
YP_002506180.1	PFAM: zinc finger DksA/TraR C4-type; KEGG: cth:Cthe_0623 TraR/DksA family transcriptional regulator
YP_002506181.1	KEGG: tpd:Teth39_0898 hypothetical protein
YP_002506182.1	PFAM: 3-dehydroquinate synthase; KEGG: cth:Cthe_0786 3-dehydroquinate synthase
YP_002506183.1	IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme
YP_002506184.1	KEGG: cbk:CLL_A2183 hypothetical protein
YP_002506185.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: aoe:Clos_1183 transcriptional regulator
YP_002506186.1	with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate
YP_002506187.1	with PdxST is involved in the biosynthesis of pyridoxal 5'-phosphate; PdxT catalyzes the hydrolysis of glutamine to glutamate and ammonia; PdxS utilizes the ammonia to synthesize pyridoxal 5'-phosphate
YP_002506188.1	PFAM: rhomboid family protein; KEGG: cth:Cthe_1048 rhomboid family protein
YP_002506189.1	PFAM: homocysteine S-methyltransferase; KEGG: tex:Teth514_1211 homocysteine S-methyltransferase
YP_002506190.1	PFAM: AMP-dependent synthetase and ligase; KEGG: csc:Csac_0934 AMP-dependent synthetase and ligase
YP_002506191.1	PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: cth:Cthe_1267 two component LuxR family transcriptional regulator
YP_002506192.1	PFAM: ATP-binding region ATPase domain protein; Sensor DegS domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: cth:Cthe_1268 histidine kinase
YP_002506193.1	PFAM: protein of unknown function DUF323; KEGG: cbe:Cbei_3040 protein of unknown function DUF323
YP_002506194.1	PFAM: glycoside hydrolase family 11; KEGG: cpy:Cphy_2105 endo-1,4-beta-xylanase
YP_002506195.1	PFAM: excinuclease ABC C subunit domain protein; KEGG: cbt:CLH_0313 GIY-YIG domain protein
YP_002506196.1	PFAM: cyclase family protein; KEGG: amt:Amet_4419 cyclase family protein
YP_002506197.1	PFAM: rubrerythrin; KEGG: cbk:CLL_A1055 rubrerythrin
YP_002506198.1	PFAM: thioesterase superfamily protein; KEGG: cpy:Cphy_2327 thioesterase superfamily protein
YP_002506199.1	KEGG: cbe:Cbei_3616 transcriptional regulator, XRE family
YP_002506200.1	Modulates the activities of several enzymes which are inactive in their acetylated form
YP_002506201.1	TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein; KEGG: cbe:Cbei_4956 CrcB protein
YP_002506204.1	TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase class V; KEGG: cth:Cthe_0655 cysteine desulfurase family protein
YP_002506205.1	TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV; KEGG: cth:Cthe_0856 branched chain amino acid aminotransferase
YP_002506206.1	TIGRFAM: sporulation integral membrane protein YlbJ; PFAM: nucleoside recognition domain protein; KEGG: cth:Cthe_1274 nucleoside recognition
YP_002506207.1	KEGG: cth:Cthe_1275 H+-ATPase H
YP_002506208.1	Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA
YP_002506209.1	TIGRFAM: methyltransferase; PFAM: protein of unknown function methylase KEGG: cth:Cthe_1277  methyltransferase
YP_002506210.1	catalyzes branch migration in Holliday junction intermediates
YP_002506211.1	required for 70S ribosome assembly
YP_002506212.1	KEGG: cth:Cthe_1281 hypothetical protein
YP_002506213.1	KEGG: cth:Cthe_1282 diguanylate cyclase with GAF sensor; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GAF domain protein
YP_002506214.1	PFAM: cell division protein FtsA; KEGG: cno:NT01CX_1629 cell division protein FtsA
YP_002506215.1	KEGG: cth:Cthe_1283 DNA-(apurinic or apyrimidinic site) lyase / endonuclease III; TIGRFAM: endonuclease III; PFAM: HhH-GPD family protein; endonuclease III/Nth; SMART: iron-sulfur cluster loop
YP_002506216.1	TIGRFAM: glycogen/starch synthase, ADP-glucose type; PFAM: glycosyl transferase group 1; Starch synthase catalytic domain protein; KEGG: cth:Cthe_1284 glycogen/starch synthases, ADP-glucose type
YP_002506217.1	PFAM: GAF domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: cth:Cthe_1285 metal dependent phosphohydrolase
YP_002506218.1	PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein; KEGG: cth:Cthe_1286 peptidase S1 and S6, chymotrypsin/Hap
YP_002506219.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: cth:Cthe_1287 periplasmic sensor signal transduction histidine kinase
YP_002506220.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cth:Cthe_1288 two component transcriptional regulator
YP_002506221.1	PFAM: SH3 type 3 domain protein; KEGG: tel:tll0075 hypothetical protein
YP_002506222.1	TIGRFAM: sporulation transcription factor Spo0A; PFAM: response regulator receiver; sporulation initiation factor Spo0A; KEGG: cth:Cthe_0812 response regulator receiver protein
YP_002506223.1	KEGG: cth:Cthe_0813 SpoIVB peptidase; TIGRFAM: stage IV sporulation protein B; PFAM: peptidase S55 SpoIVB; SMART: PDZ/DHR/GLGF domain protein
YP_002506224.1	TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: cth:Cthe_0814 DNA repair protein RecN
YP_002506225.1	PFAM: arginine repressor; KEGG: cth:Cthe_0815 ArgR family transcriptional regulator
YP_002506226.1	PFAM: ATP-NAD/AcoX kinase; KEGG: cth:Cthe_0816 NAD(+) kinase
YP_002506227.1	TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; KEGG: cth:Cthe_0827 hemolysin A
YP_002506228.1	TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: transketolase; transketolase; KEGG: cth:Cthe_0828 1-deoxy-D-xylulose-5-phosphate synthase
YP_002506229.1	KEGG: cth:Cthe_0829 hypothetical protein
YP_002506230.1	PFAM: polyprenyl synthetase; KEGG: cth:Cthe_0831 farnesyl-diphosphate synthase
YP_002506231.1	TIGRFAM: exodeoxyribonuclease VII small subunit; PFAM: exonuclease VII small subunit; KEGG: nth:Nther_1698 exodeoxyribonuclease VII small subunit
YP_002506232.1	TIGRFAM: exodeoxyribonuclease VII large subunit; PFAM: exonuclease VII large subunit; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: cth:Cthe_0833 exodeoxyribonuclease VII large subunit
YP_002506233.1	TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: cth:Cthe_0834 NusB antitermination factor
YP_002506234.1	KEGG: cth:Cthe_0835 hypothetical protein
YP_002506235.1	KEGG: cth:Cthe_0836 hypothetical protein
YP_002506236.1	PFAM: protein of unknown function DUF322; KEGG: cth:Cthe_0837 hypothetical protein
YP_002506237.1	KEGG: cth:Cthe_0838 hypothetical protein
YP_002506238.1	KEGG: cth:Cthe_0839 stage III sporulation protein AG
YP_002506239.1	KEGG: cth:Cthe_0840 hypothetical protein
YP_002506240.1	TIGRFAM: stage III sporulation protein AE; PFAM: sporulation stage III protein AE; KEGG: cth:Cthe_0841 mutants block sporulation after engulfment
YP_002506241.1	TIGRFAM: stage III sporulation protein AD; PFAM: sporulation stage III protein AD; KEGG: cth:Cthe_0842 stage III sporulation protein AD
YP_002506242.1	TIGRFAM: stage III sporulation protein AC; PFAM: stage III sporulation AC family protein; KEGG: cth:Cthe_0843 stage III sporulation AC
YP_002506243.1	TIGRFAM: stage III sporulation protein AB; PFAM: sporulation stage III protein AB; KEGG: cth:Cthe_0844 stage III sporulation protein spoIIIAB
YP_002506244.1	TIGRFAM: stage III sporulation protein AA; SMART: AAA ATPase; KEGG: cth:Cthe_0845 stage III sporulation protein spoIIIAA
YP_002506245.1	KEGG: cdf:CD1619  ABC transporter peremase
YP_002506246.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cdf:CD1618 ABC transporter ATP-binding protein
YP_002506247.1	PFAM: regulatory protein GntR HTH; KEGG: cbt:CLH_0644 GntR family transcriptional regulator
YP_002506248.1	KEGG: btk:BT9727_4703 hypothetical protein
YP_002506249.1	KEGG: cth:Cthe_0846 hypothetical protein
YP_002506250.1	Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA
YP_002506251.1	PFAM: creatinase; peptidase M24; KEGG: cth:Cthe_0848 peptidase M24
YP_002506252.1	catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis
YP_002506253.1	PFAM: xylose isomerase; SMART: AP endonuclease family 2; KEGG: tpd:Teth39_1081 xylose isomerase domain-containing protein
YP_002506254.1	catalyzes the removal of amino acids from the N termini of peptides
YP_002506255.1	TIGRFAM: histidinol phosphate phosphatase HisJ family; PFAM: PHP domain protein; KEGG: cth:Cthe_0724 HisJ family histidinol phosphate phosphatase
YP_002506256.1	KEGG: ckl:CKL_3623 hypothetical protein
YP_002506257.1	KEGG: nth:Nther_2705 hypothetical protein
YP_002506258.1	catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs
YP_002506259.1	TIGRFAM: FeS cluster assembly scaffold protein NifU; PFAM: nitrogen-fixing NifU domain protein; KEGG: cth:Cthe_0721 nitrogen-fixing NifU-like protein
YP_002506260.1	TIGRFAM: cysteine desulfurase NifS; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: cth:Cthe_0720 aminotransferase, class V
YP_002506261.1	TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: cth:Cthe_0719 BadM/Rrf2 family transcriptional regulator
YP_002506262.1	KEGG: cth:Cthe_0718 hypothetical protein
YP_002506264.1	PFAM: ATPase AAA; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: cth:Cthe_0617 recombination factor protein RarA
YP_002506265.1	PFAM: copper amine oxidase domain protein; KEGG: cth:Cthe_0243 copper amine oxidase-like protein
YP_002506266.1	PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein; KEGG: csc:Csac_2307 2-alkenal reductase
YP_002506267.1	TIGRFAM: 2'-5' RNA ligase; PFAM: phosphoesterase HXTX; KEGG: amt:Amet_0775 2'-5' RNA ligase
YP_002506268.1	PFAM: transferase; nucleotidyl transferase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; KEGG: cth:Cthe_1079 nucleotidyl transferase
YP_002506269.1	binds to the ribosome on the universally-conserved alpha-sarcin loop
YP_002506270.1	PFAM: copper amine oxidase domain protein; KEGG: cpf:CPF_2611 hypothetical protein
YP_002506272.1	TIGRFAM: stage II sporulation protein P; PFAM: stage II sporulation P family protein; KEGG: cth:Cthe_1328 stage II sporulation P
YP_002506273.1	TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; CoA protein activase; KEGG: cth:Cthe_1329  CoA-substrate-specific enzyme activase
YP_002506274.1	catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes
YP_002506275.1	catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG
YP_002506276.1	catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III
YP_002506277.1	PFAM: beta-lactamase; KEGG: cth:Cthe_1342 beta-lactamase-like protein
YP_002506278.1	hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); defense mechanism against a harmful effect of D-tyrosine
YP_002506279.1	KEGG: cth:Cthe_1344 (p)ppGpp synthetase I, SpoT/RelA; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase HD region
YP_002506280.1	catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis
YP_002506281.1	TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: cbe:Cbei_4321 single-stranded-DNA-specific exonuclease RecJ
YP_002506282.1	TIGRFAM: DNA polymerase III subunit delta; PFAM: DNA polymerase III delta; KEGG: cth:Cthe_1040 DNA polymerase III subunit delta
YP_002506283.1	TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; PFAM: beta-lactamase; ComEC/Rec2-related protein; KEGG: cth:Cthe_0606 DNA internalization-related competence protein ComEC/Rec2
YP_002506284.1	PFAM: NLP/P60 protein; SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: tte:TTE0880 cell wall-associated hydrolase (invasion-associated proteins)
YP_002506285.1	PFAM: GCN5-related N-acetyltransferase; KEGG: cth:Cthe_0603 GCN5-related N-acetyltransferase
YP_002506287.1	PFAM: regulatory protein MarR; KEGG: ckl:CKL_0101 transcriptional regulator
YP_002506288.1	TIGRFAM: YhgE/Pip N-terminal domain protein; YhgE/Pip C-terminal domain protein; PFAM: ABC transporter; KEGG: cpy:Cphy_0609 hypothetical protein
YP_002506290.1	TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: cbt:CLH_0332 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein
YP_002506291.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: dsy:DSY2399 hypothetical protein
YP_002506292.1	PFAM: protein of unknown function DUF814; Fibronectin-binding A domain protein; KEGG: cth:Cthe_0581 fibronectin-binding A-like protein
YP_002506293.1	catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate
YP_002506294.1	PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: bcl:ABC0853 hypothetical protein
YP_002506295.1	PFAM: protein of unknown function DUF362; KEGG: cpy:Cphy_1972 hypothetical protein
YP_002506297.1	TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: cth:Cthe_0669 spore germination B3 GerAC like
YP_002506298.1	TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: cth:Cthe_0668 spore germination protein
YP_002506299.1	PFAM: GerA spore germination protein; KEGG: cth:Cthe_0667 GerA spore germination protein
YP_002506300.1	PFAM: glycoside hydrolase family 43; KEGG: cth:Cthe_0661 ricin B lectin
YP_002506302.1	KEGG: csc:Csac_1811 hypothetical protein
YP_002506303.1	KEGG: cja:CJA_3689 hypothetical protein
YP_002506304.1	KEGG: cpy:Cphy_2927 DNA ligase, NAD-dependent; TIGRFAM: DNA ligase, NAD-dependent; PFAM: BRCT domain protein; NAD-dependent DNA ligase OB-fold; NAD-dependent DNA ligase adenylation; SMART: Helix-hairpin-helix DNA-binding class 1; NAD-dependent DNA ligase
YP_002506305.1	KEGG: cth:Cthe_1036 hypothetical protein
YP_002506306.1	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
YP_002506307.1	PFAM: ribosomal protein S20; KEGG: cth:Cthe_1039 ribosomal protein S20
YP_002506308.1	KEGG: cth:Cthe_1325 coproporphyrinogen III oxidase anaerobic; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: radical SAM protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_002506309.1	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: fnu:FN1789 Na+ driven multidrug efflux pump
YP_002506310.1	PFAM: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: cbe:Cbei_4431 response regulator receiver protein
YP_002506311.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase internal region; KEGG: cbe:Cbei_4458 histidine kinase internal region
YP_002506312.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bja:blr1123 ABC transporter sugar-binding protein
YP_002506313.1	PFAM: inner-membrane translocator; KEGG: gka:GK1908 L-arabinose ABC transporter (permease)
YP_002506314.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK1909 ABC transporter ATP-binding protein
YP_002506315.1	KEGG: amt:Amet_3799  solute-binding component of ABC transporter
YP_002506316.1	PFAM: glycosyl transferase family 2; chitin synthase; KEGG: cpo:COPRO5265_0045 chitin synthase
YP_002506317.1	TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; KEGG: cbe:Cbei_4487 thiamine-phosphate pyrophosphorylase
YP_002506318.1	catalyzes the formation of 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP
YP_002506319.1	required for the synthesis of the hydromethylpyrimidine moiety of thiamine
YP_002506320.1	TIGRFAM: phosphomethylpyrimidine kinase; PFAM: phosphomethylpyrimidine kinase type-1; KEGG: cbf:CLI_0857 phosphomethylpyrimidine kinase
YP_002506322.1	KEGG: aoe:Clos_0174 hypothetical protein
YP_002506323.1	PFAM: ferric-uptake regulator; KEGG: cpf:CPF_2029 FUR family transcriptional regulator
YP_002506325.1	TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Ferrous iron transporter B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; KEGG: mta:Moth_1182 small GTP-binding protein domain-containing protein
YP_002506326.1	PFAM: FeoA family protein; KEGG: hmo:HM1_2506 ferrous iron uptake protein FeoA
YP_002506327.1	KEGG: afl:Aflv_2769 hypothetical protein
YP_002506329.1	PFAM: Mg2 transporter protein CorA family protein; KEGG: mba:Mbar_A0156 transporter
YP_002506330.1	RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; subunit beta of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not
YP_002506331.1	TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: cth:Cthe_0106 GTP cyclohydrolase II
YP_002506332.1	catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine
YP_002506333.1	TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein; KEGG: cth:Cthe_0104 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase
YP_002506334.1	PFAM: UMUC domain protein DNA-repair protein; KEGG: cth:Cthe_2083 DNA-directed DNA polymerase
YP_002506335.1	KEGG: csc:Csac_0616 hypothetical protein
YP_002506336.1	PFAM: transposase IS3/IS911 family protein; KEGG: drm:Dred_1014 transposase IS3/IS911 family protein
YP_002506337.1	PFAM: integrase; KEGG: afl:Aflv_2378 transposase
YP_002506338.1	SMART: Parallel beta-helix repeat; KEGG: dol:Dole_0363 parallel beta-helix repeat-containing protein
YP_002506339.1	PFAM: protein of unknown function DUF159; KEGG: csc:Csac_0196 hypothetical protein
YP_002506340.1	KEGG: cpy:Cphy_2209 hypothetical protein
YP_002506341.1	KEGG: cpy:Cphy_3137 hypothetical protein
YP_002506342.1	SMART: helix-turn-helix- domain containing protein AraC type; KEGG: lmo:lmo2672 hypothetical protein
YP_002506343.1	PFAM: lipolytic protein G-D-S-L family; cellulosome protein dockerin type I; KEGG: scl:sce3301 hypothetical protein
YP_002506344.1	KEGG: cth:Cthe_0501 hypothetical protein
YP_002506345.1	KEGG: cth:Cthe_0500 hypothetical protein
YP_002506346.1	KEGG: cth:Cthe_0499 hypothetical protein
YP_002506347.1	PFAM: protein of unknown function DUF342; KEGG: cth:Cthe_0498 hypothetical protein
YP_002506348.1	TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: cth:Cthe_0495 RNA polymerase, sigma 28 subunit
YP_002506349.1	KEGG: cth:Cthe_0494 hypothetical protein
YP_002506350.1	stimulates methylation of MCP proteins; PFAM: CheD family protein; KEGG: cth:Cthe_0493 chemoreceptor glutamine deamidase CheD
YP_002506351.1	PFAM: CheC domain protein; KEGG: cth:Cthe_0492 CheC, inhibitor of MCP methylation
YP_002506352.1	PFAM: CheW domain protein; KEGG: cth:Cthe_0491 CheW protein
YP_002506353.1	PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; P2 response regulator binding domain protein; KEGG: cth:Cthe_0490 CheA signal transduction histidine kinases
YP_002506354.1	PFAM: CheB methylesterase; response regulator receiver; KEGG: cth:Cthe_0489 response regulator receiver modulated CheB methylesterase
YP_002506355.1	PFAM: cobyrinic acid ac-diamide synthase; KEGG: cth:Cthe_0487 cobyrinic acid a,c-diamide synthase
YP_002506356.1	PFAM: GTP-binding signal recognition particle SRP54 G- domain; SMART: ATPase AAA; KEGG: cth:Cthe_0486 GTP-binding signal recognition particle
YP_002506357.1	TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein; KEGG: cth:Cthe_0485 flagellar biosynthesis protein FlhA
YP_002506358.1	TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter; KEGG: cth:Cthe_0484 flagellar biosynthetic protein FlhB
YP_002506359.1	FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus
YP_002506360.1	TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; KEGG: cth:Cthe_0482 flagellar biosynthetic protein FliQ
YP_002506361.1	FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus
YP_002506362.1	KEGG: cth:Cthe_0480 hypothetical protein
YP_002506363.1	PFAM: response regulator receiver; KEGG: cth:Cthe_0479 response regulator receiver protein
YP_002506364.1	One of three proteins involved in switching the direction of the flagellar rotation
YP_002506365.1	PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: cth:Cthe_0477 flagellar motor switch protein FliM
YP_002506366.1	PFAM: flagellar basal body-associated protein FliL; KEGG: cth:Cthe_0476 hypothetical protein
YP_002506367.1	PFAM: flagellar FlbD family protein; KEGG: cth:Cthe_0475 flagellar protein
YP_002506368.1	PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; KEGG: cth:Cthe_0474 protein of unknown function DUF1078-like protein
YP_002506369.1	TIGRFAM: flagellar operon protein; KEGG: cth:Cthe_0473 flagellar operon protein
YP_002506370.1	PFAM: flagellar hook capping protein; KEGG: cth:Cthe_0472 flagellar hook capping protein
YP_002506371.1	PFAM: flagellar hook-length control protein; KEGG: cth:Cthe_0471 flagellar hook-length control protein
YP_002506372.1	KEGG: cth:Cthe_0470 hypothetical protein
YP_002506373.1	TIGRFAM: flagellar export protein FliJ; PFAM: flagellar FliJ protein; KEGG: cth:Cthe_0469 flagellar export protein FliJ
YP_002506374.1	KEGG: cth:Cthe_0468 flagellar protein export ATPase FliI; TIGRFAM: ATPase, FliI/YscN family; ATPase FliI/YscN; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; H+transporting two-sector ATPase alpha/subunit beta domain protein; SMART: ATPase AAA
YP_002506375.1	PFAM: flagellar assembly protein FliH; KEGG: cth:Cthe_0467 flagellar biosynthesis/type III secretory pathway protein-like protein
YP_002506376.1	One of three proteins involved in switching the direction of the flagellar rotation
YP_002506377.1	TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; flagellar M-ring domain protein; KEGG: cth:Cthe_0465 flagellar M-ring protein FliF
YP_002506378.1	TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: cth:Cthe_0464 flagellar hook-basal body complex subunit FliE
YP_002506379.1	TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: cth:Cthe_0463 flagellar basal-body rod protein FlgC
YP_002506380.1	TIGRFAM: flagellar basal-body rod protein FlgB; KEGG: cth:Cthe_0462 flagellar basal-body rod protein FlgB
YP_002506381.1	TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine
YP_002506382.1	KEGG: cth:Cthe_0460 DNA topoisomerase I; TIGRFAM: DNA topoisomerase I; PFAM: TOPRIM domain protein; DNA topoisomerase type IA central domain protein; DNA topoisomerase type IA zn finger domain protein; SMART: DNA topoisomerase I ATP-binding; DNA topoisomerase I DNA-binding; Toprim sub domain protein
YP_002506383.1	TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: cth:Cthe_0459 DNA protecting protein DprA
YP_002506384.1	TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; KEGG: cth:Cthe_0455 Mg chelatase, subunit ChlI
YP_002506385.1	PFAM: ATP-cone domain protein; KEGG: cth:Cthe_0450 NrdR family transcriptional regulator
YP_002506386.1	TIGRFAM: sporulation protein, YlmC/YmxH family; PFAM: PRC-barrel domain protein; KEGG: cth:Cthe_0449 hypothetical protein
YP_002506387.1	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed after engulfment; this factor is involved in the transcription of small acid-soluble proteins involved in protecting the forespore chromatin
YP_002506388.1	sigma-29; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the mother cell at the onset of sporulation
YP_002506389.1	TIGRFAM: sigma-E processing peptidase SpoIIGA; PFAM: peptidase U4 sporulation factor SpoIIGA; KEGG: cth:Cthe_0446 peptidase U4, sporulation factor SpoIIGA
YP_002506390.1	TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ domain protein; KEGG: cth:Cthe_0445 cell division protein FtsZ
YP_002506391.1	PFAM: cell division protein FtsA; KEGG: cth:Cthe_0444 cell division protein FtsA
YP_002506392.1	PFAM: protein of unknown function DUF1290; KEGG: cth:Cthe_0443 hypothetical protein
YP_002506393.1	PFAM: polypeptide-transport-associated domain protein FtsQ-type; KEGG: cth:Cthe_0442 cell division protein FtsQ
YP_002506394.1	PFAM: Mur ligase middle domain protein; domain of unknown function DUF1727; KEGG: cth:Cthe_0440 hypothetical protein
YP_002506395.1	PFAM: CobB/CobQ domain protein glutamine amidotransferase; KEGG: cth:Cthe_0439 CobB/CobQ-like glutamine amidotransferase
YP_002506396.1	TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; KEGG: cth:Cthe_0880 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase
YP_002506397.1	KEGG: csc:Csac_1706 hypothetical protein
YP_002506398.1	PFAM: lytic transglycosylase catalytic; KEGG: cpr:CPR_1960 secreted protein
YP_002506399.1	TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; KEGG: cth:Cthe_0885 dephospho-CoA kinase
YP_002506400.1	has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair
YP_002506401.1	KEGG: cth:Cthe_0889  transmembrane anti-sigma factor
YP_002506402.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: cth:Cthe_0890 ECF subfamily RNA polymerase sigma-24 factor
YP_002506403.1	PFAM: Coat F domain protein; KEGG: csc:Csac_2706 coat F domain-containing protein
YP_002506404.1	KEGG: tpd:Teth39_0443 hypothetical protein
YP_002506405.1	TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter; KEGG: cbk:CLL_A1845 V-type sodium ATP synthase subunit J
YP_002506406.1	TIGRFAM: tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA-binding S4 domain protein; KEGG: cth:Cthe_0723 tyrosyl-tRNA synthetase
YP_002506407.1	PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: csc:Csac_0150 TrkA domain-containing protein
YP_002506408.1	PFAM: TrkA-N domain protein; KEGG: csc:Csac_0151 TrkA domain-containing protein
YP_002506409.1	PFAM: protein of unknown function DUF421; KEGG: cth:Cthe_3175 hypothetical protein
YP_002506410.1	KEGG: cth:Cthe_3174 hypothetical protein
YP_002506411.1	PFAM: sodium/calcium exchanger membrane region; KEGG: cth:Cthe_3173 sodium/calcium exchanger membrane region
YP_002506412.1	PFAM: major facilitator superfamily MFS_1; KEGG: cpy:Cphy_1907 major facilitator transporter
YP_002506413.1	KEGG: hma:rrnAC2457 hypothetical protein
YP_002506414.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: aoe:Clos_2696 short-chain dehydrogenase/reductase SDR
YP_002506415.1	PFAM: ThiJ/PfpI domain protein; KEGG: cbe:Cbei_3829 ThiJ/PfpI domain protein
YP_002506416.1	PFAM: protein of unknown function UPF0153; KEGG: mms:mma_2931 hypothetical protein
YP_002506417.1	PFAM: adenylate cyclase; KEGG: cth:Cthe_2577 adenylate cyclase
YP_002506418.1	PFAM: GatB/Yqey domain protein; KEGG: cth:Cthe_1347 GatB/YqeY
YP_002506419.1	a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA
YP_002506420.1	PFAM: histidine triad (HIT) protein; KEGG: cth:Cthe_1369 histidine triad (HIT) protein
YP_002506421.1	Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_002506422.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sfu:Sfum_3382 HAD-superfamily hydrolase, subfamily IA, variant 1
YP_002506423.1	TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ; KEGG: cth:Cthe_0081 N-acetylglutamate synthase / glutamate N-acetyltransferase
YP_002506424.1	PFAM: CheW domain protein; KEGG: tpd:Teth39_1010 CheW protein
YP_002506425.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: cbe:Cbei_1428 methyl-accepting chemotaxis sensory transducer
YP_002506426.1	TIGRFAM: phosphate binding protein; KEGG: aoe:Clos_1116 phosphate binding protein
YP_002506427.1	TIGRFAM: phosphate ABC transporter inner membrane subunit PstA; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gtn:GTNG_2395 phosphate ABC transporter
YP_002506428.1	TIGRFAM: phosphate ABC transporter inner membrane subunit PstC; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: aoe:Clos_1117 phosphate ABC transporter inner membrane subunit PstC
YP_002506429.1	KEGG: cbf:CLI_2585 phosphate ABC transporter ATP-binding protein; TIGRFAM: phosphate ABC transporter ATPase; PFAM: ABC transporter related; SMART: ATPase AAA
YP_002506430.1	TIGRFAM: phosphate transporter regulatory protein PhoU; PFAM: PhoU family protein; KEGG: csc:Csac_2029 phosphate uptake regulator, PhoU
YP_002506431.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cth:Cthe_1394 two component transcriptional regulator
YP_002506432.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: cth:Cthe_1393 multi-sensor signal transduction histidine kinase
YP_002506433.1	PFAM: transposase IS200-family protein; KEGG: dsy:DSY1392 hypothetical protein
YP_002506434.1	PFAM:  carbohydrate binding; glycosyltransferase 36; glycosyltransferase 36 associated; KEGG: cth:Cthe_0275 cellobiose phosphorylase
YP_002506435.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: rfr:Rfer_1101 binding-protein-dependent transport systems inner membrane component
YP_002506436.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bcl:ABC3214 sugar ABC transporter permease
YP_002506437.1	PFAM: extracellular solute-binding protein family 1; KEGG: ace:Acel_0130 extracellular solute-binding protein, family 1
YP_002506438.1	PFAM: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: csc:Csac_0684 response regulator receiver protein
YP_002506439.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase internal region; KEGG: csc:Csac_0683 histidine kinase internal region
YP_002506440.1	PFAM: extracellular solute-binding protein family 1; KEGG: csc:Csac_0682 extracellular solute-binding protein
YP_002506441.1	PFAM: ATPase AAA; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: ATPase AAA; KEGG: cth:Cthe_0312 ATPase AAA-2
YP_002506442.1	PFAM: phosphate transporter; KEGG: csc:Csac_2032 phosphate transporter
YP_002506443.1	PFAM: protein of unknown function DUF47; KEGG: ckl:CKL_1353 pit accessory protein
YP_002506444.1	KEGG: cth:Cthe_0311 excinuclease ABC subunit A; TIGRFAM: excinuclease ABC subunit A; PFAM: ABC transporter; SMART: ATPase AAA
YP_002506445.1	TIGRFAM: proton-coupled thiamine transporter YuaJ; PFAM: thiamine transporter YuaJ; KEGG: chy:CHY_0230 proton-coupled thiamine transporter YuaJ
YP_002506446.1	PFAM: Resolvase domain; Recombinase; KEGG: cdf:CD0436  recombinase
YP_002506447.1	PFAM: cellulosome protein dockerin type I; glycosyl hydrolase 53; KEGG: cth:Cthe_1400 glycosyl hydrolase 53
YP_002506449.1	KEGG: cth:Cthe_1311 signal transduction histidine kinase regulating citrate/malate metabolism
YP_002506451.1	PFAM: Accessory gene regulator B; KEGG: cth:Cthe_1310 accessory gene regulator B
YP_002506452.1	PFAM: NLP/P60 protein; SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: cth:Cthe_0605 PgdS peptidase. Cysteine peptidase. MEROPS family C40
YP_002506453.1	PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; 6-phosphogluconate dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; ketopantoate reductase; KEGG: cth:Cthe_1022 glycerol-3-phosphate dehydrogenase (NAD(P)(+))
YP_002506454.1	PFAM: protein of unknown function DUF205; KEGG: cth:Cthe_1023 acyl-phosphate glycerol-3-phosphate acyltransferase
YP_002506455.1	EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains
YP_002506456.1	PFAM: protein of unknown function DUF512; KEGG: cth:Cthe_1025 hypothetical protein
YP_002506457.1	PFAM: transposase IS200-family protein; KEGG: dsy:DSY1392 hypothetical protein
YP_002506458.1	some L32 proteins have zinc finger motifs consisting of CXXC while others do not
YP_002506459.1	PFAM: protein of unknown function DUF177; KEGG: cth:Cthe_1027 hypothetical protein
YP_002506460.1	TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: cth:Cthe_1028 acetate kinase
YP_002506461.1	TIGRFAM: phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase; KEGG: cth:Cthe_1029 phosphotransacetylase
YP_002506462.1	KEGG: ckl:CKL_2500 hypothetical protein
YP_002506463.1	Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation
YP_002506464.1	TIGRFAM: phosphonopyruvate decarboxylase-related protein; proposed homoserine kinase; PFAM: metalloenzyme domain protein; homoserine kinase family protein; KEGG: cth:Cthe_1292 phosphoglycerate mutase
YP_002506466.1	PFAM: Resolvase domain; Recombinase; KEGG: aoe:Clos_1652 recombinase
YP_002506467.1	PFAM: Fascin family protein; KEGG: fscn1l; fascin homolog 1-like, actin-bundling protein   (Strongylocentrotus purpuratus)
YP_002506468.1	PFAM: ATP-binding region ATPase domain protein; KEGG: cth:Cthe_2944 periplasmic sensor signal transduction histidine kinase
YP_002506469.1	PFAM: hypothetical protein; response regulator receiver; KEGG: cth:Cthe_0725 response regulator receiver modulated metal dependent phosphohydrolase
YP_002506470.1	KEGG: fjo:Fjoh_0438 hypothetical protein
YP_002506471.1	KEGG: fjo:Fjoh_0437 hypothetical protein
YP_002506472.1	PFAM: integrase; KEGG: lpf:lpl2033 hypothetical protein
YP_002506473.1	KEGG: cth:Cthe_2851 hypothetical protein
YP_002506474.1	PFAM: peptidoglycan-binding protein
YP_002506475.1	TIGRFAM: hypothetical protein; PFAM: YD repeat-containing protein; KEGG: cth:Cthe_3052 hypothetical protein
YP_002506476.1	PFAM: integrase; KEGG: ckl:CKL_3445 transposase
YP_002506477.1	PFAM: transposase IS3/IS911 family protein; KEGG: lwe:lwe2186 transposase
YP_002506478.1	PFAM: alpha/beta hydrolase fold-3 domain protein; KEGG: nar:Saro_0231 esterase/lipase/thioesterase
YP_002506479.1	KEGG: afl:Aflv_1572 ABC-type multidrug transporter, permease
YP_002506480.1	KEGG: tle:Tlet_1861  ABC transporter permease
YP_002506481.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: afl:Aflv_1573 ABC-type multidrug transporter, ATPase component
YP_002506482.1	PFAM: transposase IS116/IS110/IS902 family protein; KEGG: tte:TTE1030 transposase
YP_002506483.1	PFAM: regulatory protein TetR; KEGG: ckl:CKL_3748 transcriptional regulator
YP_002506484.1	PFAM: lipolytic protein G-D-S-L family; cellulosome protein dockerin type I; KEGG: cac:CAC0537 acetylxylan esterase
YP_002506486.1	PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: amt:Amet_4132 5-formyltetrahydrofolate cyclo-ligase
YP_002506487.1	KEGG: cth:Cthe_1296 hypothetical protein
YP_002506488.1	KEGG: cth:Cthe_1299 hypothetical protein
YP_002506489.1	PFAM: amidohydrolase; amidohydrolase; KEGG: cth:Cthe_1199 amidohydrolase
YP_002506490.1	TIGRFAM: adenosylhomocysteinase; PFAM: S-adenosyl-L-homocysteine hydrolase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; S-adenosyl-L-homocysteine hydrolase, NAD binding; KEGG: cth:Cthe_1200 adenosylhomocysteinase
YP_002506491.1	KEGG: cth:Cthe_3163 carbohydrate-binding family 25 protein
YP_002506492.1	KEGG: cth:Cthe_3162 SAM dependent methyltransferase
YP_002506493.1	PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: cth:Cthe_3161 ribosomal small subunit pseudouridine synthase A
YP_002506494.1	TIGRFAM: RNA methylase, NOL1/NOP2/sun family; PFAM: Fmu (Sun) domain protein; KEGG: cth:Cthe_3160 NOL1/NOP2/sun family RNA methylase
YP_002506495.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: cdf:CD0677  RNA polymerase sigma factor
YP_002506496.1	KEGG: mst:Msp_0912 asn/thr-rich large protein family protein
YP_002506497.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: cth:Cthe_3159 GntR family transcriptional regulator
YP_002506498.1	Catalyzes the conversion of citrate to isocitrate
YP_002506499.1	PFAM: pyruvate carboxyltransferase; KEGG: cth:Cthe_3157 pyruvate carboxyltransferase
YP_002506500.1	PFAM: transposase IS3/IS911 family protein; KEGG: cth:Cthe_0590 transposase IS3/IS911
YP_002506501.1	PFAM: chemotaxis sensory transducer; KEGG: cth:Cthe_3156 methyl-accepting chemotaxis sensory transducer
YP_002506502.1	catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis
YP_002506503.1	involved in de novo purine biosynthesis
YP_002506504.1	TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase; KEGG: cth:Cthe_1247 phosphoribosylglycinamide formyltransferase
YP_002506505.1	catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis
YP_002506506.1	TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase; KEGG: cth:Cthe_1249 amidophosphoribosyltransferase
YP_002506507.1	TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; KEGG: cth:Cthe_1250 phosphoribosylaminoimidazole carboxylase, catalytic subunit
YP_002506508.1	PFAM: Auxin Efflux Carrier; KEGG: cth:Cthe_1252 auxin efflux carrier
YP_002506510.1	PFAM: NLP/P60 protein; peptidoglycan-binding domain 1 protein; KEGG: cpy:Cphy_1886 peptidoglycan binding domain-containing protein
YP_002506511.1	PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: amt:Amet_0590 alcohol dehydrogenase
YP_002506512.1	PFAM: ROK family protein; KEGG: cbt:CLH_2695 ROK family protein
YP_002506513.1	KEGG: ssa:SSA_1346 hypothetical protein
YP_002506514.1	PFAM: exonuclease RNase T and DNA polymerase III; SMART: exonuclease; KEGG: ava:Ava_B0286 exonuclease
YP_002506515.1	KEGG: cbh:CLC_1041 hypothetical protein
YP_002506516.1	PFAM: transcriptional regulator PadR family protein; KEGG: cth:Cthe_1491 PadR family transcriptional regulator
YP_002506517.1	KEGG: pdi:BDI_2325 RNA polymerase ECF-type sigma factor
YP_002506518.1	KEGG: cth:Cthe_3222 hypothetical protein
YP_002506519.1	KEGG: cdf:CD0474  iron-sulfur protein
YP_002506520.1	PFAM: regulatory protein MerR; transcription regulator MerR DNA binding; KEGG: plu:plu4700 zinc-responsive transcriptional regulator
YP_002506521.1	PFAM: integrase; KEGG: afl:Aflv_2378 transposase
YP_002506522.1	PFAM: transposase IS3/IS911 family protein; KEGG: drm:Dred_1014 transposase IS3/IS911 family protein
YP_002506524.1	contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway
YP_002506525.1	KEGG: cth:Cthe_0370  radical SAM protein; TIGRFAM: conserved hypothetical protein; PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB
YP_002506526.1	PFAM: protein of unknown function DUF111; KEGG: cth:Cthe_0369 hypothetical protein
YP_002506527.1	PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; KEGG: cth:Cthe_0368 NCAIR mutase (PurE)-related protein
YP_002506529.1	TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase type 3; KEGG: csc:Csac_1293 Cof-like hydrolase
YP_002506530.1	PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: cpr:CPR_0701 aspartate aminotransferase
YP_002506531.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: cth:Cthe_0362 AsnC family transcriptional regulator
YP_002506532.1	KEGG: cth:Cthe_0361 hypothetical protein
YP_002506533.1	TIGRFAM: thioredoxin; PFAM: thioredoxin domain; KEGG: cth:Cthe_0360 thioredoxin
YP_002506534.1	KEGG: ckl:CKL_2814 hypothetical protein
YP_002506535.1	KEGG: ckl:CKL_2815 hypothetical protein
YP_002506536.1	KEGG: cth:Cthe_0359 hypothetical protein
YP_002506537.1	TIGRFAM: alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; KEGG: cth:Cthe_0357 alpha-glucan phosphorylases
YP_002506540.1	TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: cth:Cthe_0354  CoA-substrate-specific enzyme activase
YP_002506541.1	KEGG: cth:Cthe_0353 hypothetical protein
YP_002506542.1	KEGG: cth:Cthe_0352 hypothetical protein
YP_002506543.1	PFAM: cell wall hydrolase/autolysin; protein of unknown function DUF187; KEGG: bce:BC2392 FenI
YP_002506544.1	TIGRFAM: ketose-bisphosphate aldolase; fructose-1,6-bisphosphate aldolase, class II; PFAM: ketose-bisphosphate aldolase class-II; KEGG: cth:Cthe_0349 fructose-bisphosphate aldolase
YP_002506545.1	catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis
YP_002506546.1	TIGRFAM: formate acetyltransferase; PFAM: formate C-acetyltransferase glycine radical; pyruvate formate-lyase PFL; KEGG: drm:Dred_0039 formate acetyltransferase
YP_002506547.1	PFAM: flavin reductase domain protein FMN-binding; KEGG: cth:Cthe_0343 flavin reductase-like, FMN-binding
YP_002506548.1	PFAM: glycoside hydrolase family 9; glycoside hydrolase family 9 domain protein Ig domain protein; KEGG: sus:acid_2606 cellulase
YP_002506549.1	PFAM: Platelet-activating factor acetylhydrolase plasma/intracellular isoform II; KEGG: bce:BC1813 carboxylic ester hydrolase
YP_002506550.1	PFAM: Platelet-activating factor acetylhydrolase plasma/intracellular isoform II; KEGG: bce:BC1813 carboxylic ester hydrolase
YP_002506551.1	KEGG: cbe:Cbei_4038 hypothetical protein
YP_002506552.1	KEGG: cpy:Cphy_0280 hypothetical protein
YP_002506553.1	PFAM: transposase IS200-family protein; KEGG: dsy:DSY1392 hypothetical protein
YP_002506554.1	TIGRFAM: hydrogenase, Fe-only; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; iron hydrogenase small subunit; hydrogenase large subunit domain protein; 4Fe-4S ferredoxin iron-sulphur binding, conserved site; KEGG: cth:Cthe_0342 hydrogenase, Fe-only
YP_002506555.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; 4Fe-4S ferredoxin iron-sulphur binding, conserved site; KEGG: cth:Cthe_0341 NADH dehydrogenase (quinone)
YP_002506556.1	KEGG: cth:Cthe_0340 ferredoxin
YP_002506557.1	PFAM: ATP-binding region ATPase domain protein; KEGG: cth:Cthe_0339 histidine kinase
YP_002506558.1	TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: cth:Cthe_0338 NADH-quinone oxidoreductase, E subunit
YP_002506559.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: cac:CAC1600 methyl-accepting chemotaxis-like protein (chemotaxis sensory transducer)
YP_002506560.1	PFAM: protein of unknown function DUF1292; KEGG: cth:Cthe_0154 hypothetical protein
YP_002506561.1	similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function
YP_002506562.1	PFAM: protein of unknown function DUF965; KEGG: cth:Cthe_0151 hypothetical protein
YP_002506563.1	KEGG: cth:Cthe_0150 RNA modification protein; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: radical SAM protein; protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB
YP_002506564.1	KEGG: cpy:Cphy_0674 AraC family transcriptional regulator
YP_002506565.1	PFAM: Pectate lyase/Amb allergen; cellulosome protein dockerin type I; KEGG: cth:Cthe_2179 pectate lyase/Amb allergen
YP_002506566.1	KEGG: cth:Cthe_0149 HPrNtr domain-containing protein
YP_002506567.1	PFAM: protein of unknown function DUF523; KEGG: ckl:CKL_3182 hypothetical protein
YP_002506568.1	KEGG: cth:Cthe_0146 ribonuclease R; TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; ribonuclease B OB region domain; SMART: Cold shock protein
YP_002506569.1	KEGG: ctc:CTC01950 hypothetical protein
YP_002506570.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ctc:CTC01951 alkaline phosphatase synthesis sensor protein PhoR
YP_002506571.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cbf:CLI_0424 DNA-binding response regulator
YP_002506572.1	PFAM: polysaccharide deacetylase; KEGG: cpy:Cphy_3069 polysaccharide deacetylase
YP_002506573.1	TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: cth:Cthe_0145 metal dependent phosphohydrolase
YP_002506574.1	TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: cth:Cthe_0144 preprotein translocase, SecG subunit
YP_002506575.1	enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis
YP_002506576.1	PFAM: hypothetical protein; KEGG: cdf:CD1360  phage repressor
YP_002506577.1	KEGG: hypothetical protein
YP_002506578.1	catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
YP_002506579.1	converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway and catalyzes the reversable isomerization of dihydroxyacetone phosphate to glyceraldehyde-3-phosphate
YP_002506581.1	PFAM: pentapeptide repeat protein; KEGG: cbt:CLH_1771 pentapeptide repeat protein
YP_002506582.1	KEGG: viral A-type inclusion protein
YP_002506583.1	KEGG: cbl:CLK_3683  bacteriocin ABC transporter bacteriocin-binding protein
YP_002506584.1	KEGG: amt:Amet_1032 bacteriocin ABC transporter; TIGRFAM: bacteriocin ABC transporter; PFAM: ABC transporter transmembrane protein; ABC transporter; peptidase C39 bacteriocin processing; SMART: ATPase AAA
YP_002506586.1	PFAM: ATP-binding region ATPase domain protein; KEGG: cbh:CLC_1104 sensor histidine kinase
YP_002506587.1	PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: cac:CAC1581 response regulator
YP_002506588.1	PFAM: SecA DEAD domain protein; SecA Wing and Scaffold; SecA preprotein cross-linking region; KEGG: amt:Amet_3779 SecA DEAD domain-containing protein
YP_002506589.1	catalyzes the formation of alpha-D-glucose 1-phosphate and UDP-galactose from UDP-glucose and alpha-D-galactose 1-phosphate in galactose metabolism
YP_002506590.1	enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity
YP_002506592.1	TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; KEGG: cth:Cthe_0137 glyceraldehyde-3-phosphate dehydrogenase
YP_002506593.1	KEGG: wsu:WS0153 hypothetical protein
YP_002506594.1	TIGRFAM: peptidase T-like protein; PFAM: peptidase M20; peptidase M42 family protein; peptidase dimerisation domain protein; KEGG: amt:Amet_0148 peptidase T-like protein
YP_002506595.1	PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: cth:Cthe_0127 RNA methyltransferase
YP_002506596.1	PFAM: CheC domain protein; KEGG: cth:Cthe_0126 CheC-like protein
YP_002506597.1	TIGRFAM: stage V sporulation protein AE; PFAM: SpoVA protein; KEGG: cth:Cthe_0124 SpoVA protein
YP_002506598.1	TIGRFAM: stage V sporulation protein AD; PFAM: stage V sporulation AD family protein; KEGG: cth:Cthe_0123 stage V sporulation protein AD
YP_002506599.1	TIGRFAM: stage V sporulation protein AC; PFAM: SpoVA protein; KEGG: cth:Cthe_0122 SpoVA protein
YP_002506601.1	TIGRFAM: RNA polymerase sigma-F factor; RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, sigma-B/F/G subfamily; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: cth:Cthe_0120 RNA polymerase, sigma 28 subunit
YP_002506602.1	binds to sigma F preventing its association with RNA polymerase during sporulation
YP_002506603.1	TIGRFAM: anti-anti-sigma factor; anti-sigma F factor antagonist; PFAM: sulfate transporter/antisigma-factor antagonist STAS; KEGG: cth:Cthe_0118 anti-sigma-factor antagonist
YP_002506604.1	PFAM: protein of unknown function DUF199; KEGG: cth:Cthe_0116 hypothetical protein
YP_002506605.1	TIGRFAM: glycogen debranching enzyme; PFAM: Amylo-alpha-16-glucosidase; KEGG: cth:Cthe_0115 glycogen debranching enzyme
YP_002506606.1	PFAM: protein of unknown function UPF0052 and CofD; KEGG: cth:Cthe_0114 hypothetical protein
YP_002506607.1	PFAM: conserved hypothetical protein; KEGG: cth:Cthe_0113 hypothetical protein
YP_002506608.1	catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis
YP_002506609.1	PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: cth:Cthe_0111  hydrolase
YP_002506610.1	TIGRFAM: HPr(Ser) kinase/phosphatase; PFAM: HPr serine kinase domain protein; KEGG: cth:Cthe_0110 HPr kinase
YP_002506611.1	pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient
YP_002506612.1	PFAM: polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; KEGG: cth:Cthe_1389 metal dependent phosphohydrolase
YP_002506613.1	KEGG: cth:Cthe_0454 hypothetical protein
YP_002506614.1	PFAM: integral membrane protein TerC; KEGG: ckl:CKL_2793 hypothetical protein
YP_002506615.1	PFAM: transposase IS605 OrfB; KEGG: tma:TM1831 transposase
YP_002506616.1	PFAM: stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: cbh:CLC_1773 sporulation domain-containing protein
YP_002506617.1	KEGG: cpy:Cphy_0092  PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Fe-S cluster domain protein; SMART: PAS domain containing protein
YP_002506618.1	KEGG: cbl:CLK_1211 hypothetical protein
YP_002506620.1	TIGRFAM: hydrogenase, Fe-only; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; iron hydrogenase small subunit; hydrogenase large subunit domain protein; 4Fe-4S ferredoxin iron-sulphur binding, conserved site; KEGG: aoe:Clos_0990 hydrogenase, Fe-only
YP_002506621.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; 4Fe-4S ferredoxin iron-sulphur binding, conserved site; KEGG: aoe:Clos_0989 NADH dehydrogenase (quinone)
YP_002506622.1	PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: aoe:Clos_0988 NADH dehydrogenase (ubiquinone) 24 kDa subunit
YP_002506623.1	PFAM: aldo/keto reductase; KEGG: amt:Amet_0907 aldo/keto reductase
YP_002506624.1	PFAM: protein of unknown function DUF45; KEGG: cth:Cthe_0542 hypothetical protein
YP_002506625.1	PFAM: protein of unknown function DUF1113; KEGG: ckl:CKL_0747 hypothetical protein
YP_002506626.1	PFAM: arsenate reductase; KEGG: cno:NT01CX_2298 arsenate reductase-like protein
YP_002506627.1	PFAM: CheB methylesterase; KEGG: ckl:CKL_0573 CheB1
YP_002506628.1	PFAM: protein of unknown function DUF1540; KEGG: cth:Cthe_3071 hypothetical protein
YP_002506629.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: cbe:Cbei_4828 methyl-accepting chemotaxis sensory transducer
YP_002506630.1	PFAM: CheW domain protein; KEGG: cbe:Cbei_4822  CheW protein
YP_002506631.1	PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: cbe:Cbei_4829 CheA signal transduction histidine kinase
YP_002506632.1	PFAM: response regulator receiver; KEGG: ckl:CKL_1122 hypothetical protein
YP_002506633.1	PFAM: type IV pilus assembly PilZ; KEGG: cth:Cthe_1173 type IV pilus assembly PilZ
YP_002506634.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: cbe:Cbei_3707 diguanylate cyclase
YP_002506635.1	PFAM: glycoside hydrolase family 10; S-layer domain protein; carbohydrate-binding CenC domain protein; carbohydrate-binding family 9; KEGG: swo:Swol_0293 hypothetical protein
YP_002506636.1	PFAM: glycoside hydrolase family 10; S-layer domain protein; carbohydrate-binding CenC domain protein; carbohydrate-binding family 9; KEGG: ote:Oter_1101 endo-1,4-beta-xylanase
YP_002506637.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: cbk:CLL_A1409 two component sensor kinase
YP_002506638.1	KEGG: cbk:CLL_A1408 hypothetical protein
YP_002506639.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cbk:CLL_A1407 bacitracin transport ATP-binding protein BcrA
YP_002506640.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cbk:CLL_A1406 regulatory protein VanR
YP_002506641.1	TIGRFAM: glycosyltransferase, MGT family; PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; glycosyltransferase 28 domain; KEGG: cbe:Cbei_1729 glycosyltransferase, MGT family
YP_002506642.1	PFAM: phosphopantetheine-binding; KEGG: mar:MAE_56580 peptide synthetase
YP_002506643.1	TIGRFAM: glycosyltransferase, MGT family; PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; glycosyltransferase 28 domain; KEGG: cbe:Cbei_1729 glycosyltransferase, MGT family
YP_002506644.1	TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase; KEGG: ckl:CKL_1732 PKS acyltransferase domain-containing protein
YP_002506645.1	TIGRFAM: HAD-superfamily phosphatase, subfamily IIIC; FkbH like protein; amino acid adenylation protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: ava:Ava_1613 non-ribosomal peptide synthase
YP_002506646.1	PFAM: phosphopantetheine-binding; beta-ketoacyl synthase; KEGG: npu:Npun_R3426 beta-ketoacyl synthase
YP_002506647.1	TIGRFAM: amino acid adenylation protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; beta-ketoacyl synthase; KEGG: bsu:BSU17180 polyketide synthase of type I
YP_002506648.1	KEGG: hypothetical protein
YP_002506649.1	KEGG: bwe:BcerKBAB4_1783 cyclic peptide transporter; TIGRFAM: cyclic peptide transporter; PFAM: ABC transporter related; SMART: ATPase AAA
YP_002506650.1	PFAM: copper amine oxidase domain protein; KEGG: cth:Cthe_1909 copper amine oxidase-like protein
YP_002506651.1	PFAM: copper amine oxidase domain protein; SMART: hypothetical protein; KEGG: cth:Cthe_1908 copper amine oxidase-like protein
YP_002506652.1	KEGG: cth:Cthe_1910 hypothetical protein
YP_002506653.1	PFAM: glycoside hydrolase family 5; cellulosome protein dockerin type I; KEGG: cth:Cthe_0536 glycoside hydrolase family protein
YP_002506654.1	KEGG: cts:Ctha_1865 filamentous haemagglutinin family outer membrane protein
YP_002506655.1	KEGG: dsy:DSY2854 hypothetical protein
YP_002506656.1	KEGG: paa:Paes_2303 hypothetical protein
YP_002506657.1	KEGG: cbf:CLI_2416 hypothetical protein
YP_002506658.1	PFAM: ABC transporter; KEGG: cdf:CD3195  excinuclease ABC subunit A
YP_002506659.1	PFAM: beta-lactamase; KEGG: bcy:Bcer98_1900 beta-lactamase
YP_002506660.1	PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: cpy:Cphy_0123 FMN-dependent alpha-hydroxy acid dehydrogenase
YP_002506661.1	KEGG: cpy:Cphy_2165 hypothetical protein
YP_002506662.1	PFAM: protein of unknown function DUF990; KEGG: cau:Caur_0437 hypothetical protein
YP_002506663.1	PFAM: protein of unknown function DUF990; KEGG: fnu:FN0879 ABC transporter integral membrane protein
YP_002506664.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: rba:RB5056 ABC transporter ATP-binding protein
YP_002506665.1	PFAM: cobalamin B12-binding domain protein; radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cpy:Cphy_3574 radical SAM domain-containing protein
YP_002506666.1	PFAM: NUDIX hydrolase; radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mgi:Mflv_5060 radical SAM domain-containing protein
YP_002506667.1	PFAM: radical SAM protein; KEGG: tme:Tmel_0507 radical SAM domain-containing protein
YP_002506668.1	PFAM:  carbohydrate binding; glycosyltransferase 36; glycosyltransferase 36 associated; KEGG: dth:DICTH_0484 N,N'-diacetylchitobiose phosphorylase
YP_002506669.1	PFAM: protein of unknown function DUF214; KEGG: lmf:LMOf2365_1233 ABC transporter permease
YP_002506670.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cpy:Cphy_2590 ABC transporter
YP_002506671.1	PFAM: regulatory protein TetR; KEGG: bha:BH0719 TetR/AcrR family transcriptional regulator
YP_002506672.1	SMART: hypothetical protein; KEGG: cpy:Cphy_3430 Ig domain-containing protein
YP_002506675.1	PFAM: transposase IS3/IS911 family protein; KEGG: cth:Cthe_0590 transposase IS3/IS911
YP_002506676.1	KEGG: hypothetical protein
YP_002506677.1	PFAM: S-layer domain protein; Ig domain protein group 2 domain protein; KEGG: drm:Dred_2357 S-layer domain-containing protein
YP_002506680.1	KEGG: cbf:CLI_3231 hypothetical protein
YP_002506682.1	KEGG: cbf:CLI_3233 hypothetical protein
YP_002506683.1	PFAM: radical SAM protein; KEGG: cbf:CLI_3234 radical SAM domain-containing protein
YP_002506684.1	PFAM: integrase; KEGG: ckl:CKL_3445 transposase
YP_002506685.1	PFAM: transposase IS3/IS911 family protein; KEGG: lwe:lwe2186 transposase
YP_002506686.1	PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: hya:HY04AAS1_1586 predicted phospho-2-dehydro-3-deoxyheptonate aldolase
YP_002506687.1	PFAM: 3-dehydroquinate synthase; KEGG: hmo:HM1_1788 3-dehydroquinate synthase
YP_002506688.1	KEGG: krh:KRH_20410 hypothetical protein
YP_002506689.1	PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; beta-ketoacyl synthase; KEGG: bay:RBAM_014370 MlnE
YP_002506690.1	PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; beta-ketoacyl synthase; KEGG: ckl:CKL_1731 polyketide synthase
YP_002506691.1	TIGRFAM: amino acid adenylation protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; beta-ketoacyl synthase; KEGG: bld:BLi00401 lichenysin synthetase A
YP_002506692.1	PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: sus:acid_0877 radical SAM domain-containing protein
YP_002506693.1	TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase; KEGG: ckl:CKL_1732 PKS acyltransferase domain-containing protein
YP_002506694.1	TIGRFAM: amino acid adenylation protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; alcohol acetyltransferase; KEGG: mar:MAE_60010 McnC protein
YP_002506695.1	KEGG: cbh:CLC_2462 hypothetical protein
YP_002506696.1	PFAM: condensation domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; beta-ketoacyl synthase; KEGG: ckl:CKL_1731 polyketide synthase
YP_002506697.1	TIGRFAM: amino acid adenylation protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; beta-ketoacyl synthase; KEGG: ckl:CKL_1733 hybrid nonribosomal peptide synthetase/polyketide synthase
YP_002506698.1	PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; beta-ketoacyl synthase; KEGG: ckl:CKL_2355 hybrid nonribosomal peptide synthetase/polyketide synthase
YP_002506699.1	KEGG: ckl:CKL_1733 hybrid nonribosomal peptide synthetase/polyketide synthase; TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; cobalamin B12-binding domain protein; phosphopantetheine-binding; SMART: Elongator protein 3/MiaB/NifB
YP_002506700.1	PFAM: cobalamin B12-binding domain protein; radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: tle:Tlet_1717 radical SAM domain-containing protein
YP_002506701.1	PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; KEGG: bay:RBAM_032330 YvkC
YP_002506702.1	KEGG: bwe:BcerKBAB4_1783 cyclic peptide transporter; TIGRFAM: cyclic peptide transporter; PFAM: beta-lactamase; ABC transporter related; SMART: ATPase AAA
YP_002506703.1	TIGRFAM: non-ribosomal peptide synthase; amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: bwe:BcerKBAB4_1782 amino acid adenylation domain-containing protein
YP_002506704.1	KEGG: baf:BAPKO_4042 hypothetical protein
YP_002506705.1	PFAM: glycoside hydrolase family 9; cellulosome protein dockerin type I; carbohydrate-binding CenC domain protein; glycoside hydrolase family 9 domain protein Ig domain protein; KEGG: cac:CAC0561 cellulase CelE-like protein
YP_002506706.1	PFAM: S-layer domain protein; KEGG: btk:BT9727_0789 S-layer protein
YP_002506707.1	PFAM: major facilitator superfamily MFS_1; KEGG: amt:Amet_3887 major facilitator transporter
YP_002506708.1	PFAM: lipolytic protein G-D-S-L family; cellulosome protein dockerin type I; KEGG: gvi:gll2764 unknown protein
YP_002506709.1	KEGG: cbk:CLL_A1624 SMI1 / KNR4 family
YP_002506710.1	KEGG: psp:PSPPH_1453 rhs family protein
YP_002506711.1	Catalyzes the rate-limiting step in dNTP synthesis
YP_002506712.1	KEGG: cth:Cthe_0051 hypothetical protein
YP_002506713.1	PFAM: Fibronectin type III domain protein; PA14 domain protein; KEGG: cth:Cthe_0316 PA14
YP_002506714.1	KEGG: cno:NT01CX_1600 hypothetical protein
YP_002506715.1	KEGG: cbt:CLH_3049 prokaryotic N-methylation motif domain protein
YP_002506716.1	KEGG: cno:NT01CX_1598 hypothetical protein
YP_002506717.1	PFAM: fimbrial assembly family protein; KEGG: dth:DICTH_0890 fimbrial assembly membrane protein
YP_002506719.1	TIGRFAM: type IV pilus assembly protein PilM; KEGG: cth:Cthe_0656 type IV pilus assembly protein PilM
YP_002506720.1	PFAM: peptidase A24A prepilin type IV; peptidase A24A domain protein; KEGG: cth:Cthe_0852 type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A
YP_002506721.1	KEGG: tte:TTE1265 hypothetical protein
YP_002506722.1	PFAM: type II secretion system protein; KEGG: amt:Amet_3480 type II secretion system protein
YP_002506723.1	KEGG: tpd:Teth39_1068 twitching motility protein; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: ATPase AAA
YP_002506724.1	PFAM: type II secretion system protein E; general secretory system II protein E domain protein; SMART: ATPase AAA; KEGG: tte:TTE1262 pili biogenesis protein PilB-like ATPase
YP_002506725.1	PFAM: uracil-DNA glycosylase; KEGG: cth:Cthe_3109 uracil-DNA glycosylase protein
YP_002506726.1	TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: uracil-DNA glycosylase; KEGG: cth:Cthe_3108 phage SPO1 DNA polymerase-related protein
YP_002506727.1	PFAM: glycosyl transferase family 39; KEGG: cth:Cthe_3095 glycosyl transferase
YP_002506728.1	KEGG: cdf:CD0277 hypothetical protein
YP_002506729.1	PFAM: adenylosuccinate synthetase; KEGG: cth:Cthe_3093 adenylosuccinate synthetase
YP_002506730.1	PFAM: Domain of unknown function DUF1858; KEGG: cth:Cthe_3092 hypothetical protein
YP_002506731.1	TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily subunit beta; PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: cth:Cthe_3091 tartrate/fumarate subfamily Fe-S type hydro-lyase subunit beta
YP_002506732.1	Catalyzes the reversible hydration of fumaric acid to yield I-malic acid
YP_002506733.1	PFAM: UspA domain protein; KEGG: cth:Cthe_3089 hypothetical protein
YP_002506734.1	PFAM: histone family protein DNA-binding protein; KEGG: tpd:Teth39_0249 histone family protein DNA-binding protein
YP_002506735.1	PFAM: response regulator receiver; KEGG: cth:Cthe_3087 response regulator receiver protein
YP_002506736.1	PFAM: shikimate kinase; KEGG: cth:Cthe_0731 shikimate kinase
YP_002506737.1	catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis
YP_002506738.1	TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); KEGG: cth:Cthe_3086 3-phosphoshikimate 1-carboxyvinyltransferase
YP_002506739.1	PFAM:  RNA methylase; THUMP domain protein; KEGG: hmo:HM1_0388 THUMP domain-containing protein
YP_002506740.1	converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer
YP_002506741.1	PFAM: pseudouridine synthase; KEGG: cth:Cthe_0278 ribosomal large subunit pseudouridine synthase D
YP_002506742.1	KEGG: cth:Cthe_0277 hypothetical protein
YP_002506743.1	KEGG: tte:TTE2521 hypothetical protein
YP_002506744.1	TIGRFAM: agmatinase; PFAM: arginase/agmatinase/formiminoglutamase; KEGG: amt:Amet_2650  agmatinase
YP_002506745.1	TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; KEGG: pca:Pcar_2167 glutamyl-tRNA (gln) amidotransferase subunit C, GatC-like
YP_002506746.1	TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, A subunit; PFAM: amidase; KEGG: tex:Teth514_0540 glutamyl-tRNA(Gln) amidotransferase, subunit alpha
YP_002506747.1	TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB/Yqey domain protein; GatB region; GatB central domain protein; KEGG: csc:Csac_0910 glutamyl-tRNA(Gln) amidotransferase subunit beta
YP_002506749.1	PFAM: Resolvase domain; Recombinase; KEGG: cdf:CD1905 site-specific recombinases
YP_002506751.1	PFAM: cellulosome protein dockerin type I; KEGG: gvi:gll3705 unknown protein
YP_002506752.1	PFAM: major facilitator superfamily MFS_1; KEGG: mem:Memar_2034 major facilitator transporter
YP_002506753.1	PFAM: sodium/hydrogen exchanger; KEGG: ckl:CKL_0508 NapA
YP_002506754.1	KEGG: tex:Teth514_2383 hypothetical protein
YP_002506755.1	PFAM: small multidrug resistance protein; KEGG: cbe:Cbei_3445 small multidrug resistance protein
YP_002506756.1	PFAM: peptidase M16 domain protein; peptidase M16C associated domain protein; KEGG: ckl:CKL_0709 peptidase
YP_002506757.1	PFAM: Rieske [2Fe-2S] domain protein; FAD dependent oxidoreductase; KEGG: nth:Nther_0727 FAD dependent oxidoreductase
YP_002506758.1	TIGRFAM: conserved hypothetical protein; KEGG: cau:Caur_2739 hypothetical protein
YP_002506759.1	catalyzes the formation of L-tryptophan from indole and L-serine
YP_002506760.1	PFAM: glycoside hydrolase family 42; beta-galactosidase trimerisation domain protein; beta-galactosidase domain protein; KEGG: pmo:Pmob_0829 beta-galactosidase
YP_002506761.1	PFAM: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: dth:DICTH_0042 two-component response regulator
YP_002506762.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase internal region; KEGG: csc:Csac_1355 integral membrane sensor signal transduction histidine kinase
YP_002506763.1	PFAM: glycoside hydrolase; KEGG: cpy:Cphy_0220 glycoside hydrolase family 3 protein
YP_002506764.1	catalyzes the transfer of alpha-xylosyl residue from alpha-xyloside to xylose, glucose, mannose, fructose, maltose, isomaltose, nigerose, kojibiose, sucrose, and trehalose; shows higher activity against alpha-xylosyl fluoride, isoprimeverose (6-O-alpha-xylopyranosyl-glucopyranose), and alpha-xyloside in xyloglucan oligosaccharides
YP_002506765.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: cpy:Cphy_1547 binding-protein-dependent transport systems inner membrane component
YP_002506766.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: cpy:Cphy_1548 binding-protein-dependent transport systems inner membrane component
YP_002506767.1	PFAM: extracellular solute-binding protein family 1; KEGG: cpy:Cphy_1549 hypothetical protein
YP_002506768.1	PFAM: protein of unknown function DUF218; KEGG: cth:Cthe_1772 hypothetical protein
YP_002506769.1	KEGG: cth:Cthe_2543 spore germination protein-like protein
YP_002506770.1	PFAM: acyl-ACP thioesterase; KEGG: ckl:CKL_0088 acyl-acyl carrier protein thioesterase
YP_002506771.1	TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; KEGG: cth:Cthe_2079 thylakoidal processing peptidase
YP_002506772.1	PFAM: pyrrolo-quinoline quinone; KEGG: cth:Cthe_0739 hypothetical protein
YP_002506773.1	PFAM: pyrrolo-quinoline quinone; KEGG: cth:Cthe_0739 hypothetical protein
YP_002506774.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: cpe:CPE0333 cation-transporting ATPase
YP_002506776.1	TIGRFAM: hydrogenase, Fe-only; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; iron hydrogenase small subunit; hydrogenase large subunit domain protein; 4Fe-4S ferredoxin iron-sulphur binding, conserved site; KEGG: cth:Cthe_0342 hydrogenase, Fe-only
YP_002506777.1	PFAM: DNA mismatch repair protein MutS domain protein; KEGG: dsy:DSY2437 hypothetical protein
YP_002506779.1	PFAM: inositol monophosphatase; KEGG: nis:NIS_1712 inositol-phosphate phosphatase
YP_002506780.1	PFAM: AMP-dependent synthetase and ligase; KEGG: cth:Cthe_1232 AMP-dependent synthetase and ligase
YP_002506781.1	PFAM: dihydropteroate synthase DHPS; KEGG: mta:Moth_1207 methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase
YP_002506782.1	catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine; expressed in B. subtilis under methionine starvation conditions
YP_002506783.1	KEGG: amt:Amet_0741 hypothetical protein
YP_002506784.1	PFAM: penicillin-binding protein transpeptidase; KEGG: cac:CAC0506 penicillin-binding protein
YP_002506785.1	PFAM: cell cycle protein; KEGG: cac:CAC0505 cell division membrane protein
YP_002506786.1	PFAM: Forkhead-associated protein; KEGG: cbf:CLI_3569 FHA domain-containing protein
YP_002506787.1	PFAM: protein of unknown function DUF1294; KEGG: cth:Cthe_0204 hypothetical protein
YP_002506788.1	TIGRFAM: stage V sporulation protein B; PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: ctc:CTC00988 stage V sporulation protein B
YP_002506789.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase; KEGG: sth:STH2367 phosphoglycolate phosphatase
YP_002506790.1	TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: ckl:CKL_1650 transporter protein
YP_002506791.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: tme:Tmel_0141 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_002506792.1	TIGRFAM: hemerythrin-like metal-binding protein; PFAM: hemerythrin HHE cation binding domain protein; KEGG: swo:Swol_2168 iron-binding protein, hemerythrin
YP_002506793.1	Converts (S)-lactate and NAD(+) to pyruvate and NADH
YP_002506794.1	PFAM: iron-containing alcohol dehydrogenase; 3-dehydroquinate synthase; KEGG: cbe:Cbei_4092 3-dehydroquinate synthase
YP_002506795.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; KEGG: cac:CAC1625 phosphoserine phosphatase family protein
YP_002506796.1	PFAM: helicase; DbpA RNA-binding domain protein; DEAD/DEAH box helicase; SMART: DEAD-like helicases; KEGG: cno:NT01CX_0997 ATP-dependent RNA helicase
YP_002506797.1	PFAM: S-layer domain protein; Na-Ca exchanger/integrin-beta4; KEGG: cyt:cce_5280 hypothetical protein
YP_002506798.1	KEGG: gur:Gura_0755 coagulation factor 5/8 type domain-containing protein
YP_002506799.1	PFAM: Tail Collar domain protein; KEGG: pna:Pnap_4722 phage tail collar domain protein
YP_002506800.1	PFAM: Tail Collar domain protein; KEGG: gur:Gura_0754 phage tail collar domain-containing protein
YP_002506801.1	PFAM: Tail Collar domain protein; KEGG: pna:Pnap_4722 phage tail collar domain protein
YP_002506802.1	PFAM: nitroreductase; KEGG: cbl:CLK_1643 hypothetical protein
YP_002506803.1	PFAM: hemerythrin HHE cation binding domain protein; KEGG: cbf:CLI_1733 hypothetical protein
YP_002506804.1	KEGG: cbb:CLD_2900 hypothetical protein
YP_002506805.1	PFAM: alpha/beta hydrolase fold; KEGG: cbk:CLL_A2130 alpha/beta superfamily hydrolase
YP_002506806.1	PFAM: sodium:neurotransmitter symporter; KEGG: cbt:CLH_2732 sodium/proline symporter
YP_002506808.1	TIGRFAM: small, acid-soluble spore protein tlp; KEGG: cbe:Cbei_4610 small acid-soluble spore protein Tlp
YP_002506810.1	KEGG: cbe:Cbei_0745 hypothetical protein
YP_002506811.1	PFAM: aldo/keto reductase; KEGG: cth:Cthe_0236 aldo/keto reductase
YP_002506812.1	KEGG: cbo:CBO0408 hypothetical protein
YP_002506813.1	KEGG: cbe:Cbei_4617 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_002506815.1	PFAM: adenylate cyclase; KEGG: mac:MA0084 hypothetical protein
YP_002506817.1	PFAM: phosphopantetheine-binding; KEGG: oan:Oant_1477 acyl carrier protein
YP_002506818.1	PFAM: protein of unknown function DUF201; KEGG: saq:Sare_0485 hypothetical protein
YP_002506819.1	PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: aeh:Mlg_0126 Orn/DAP/Arg decarboxylase 2
YP_002506820.1	PFAM: thioesterase; KEGG: bcz:BCZK1713 thioesterase
YP_002506821.1	KEGG: sai:Saci_2019 thymidylate kinase
YP_002506822.1	KEGG: cac:CA_P0137 hypothetical protein
YP_002506823.1	KEGG: plu:plu2412 hypothetical protein
YP_002506824.1	PFAM: AMP-dependent synthetase and ligase; KEGG: nis:NIS_0535 long-chain fatty-acid-CoA ligase
YP_002506826.1	PFAM: phosphopantetheine-binding; KEGG: trq:TRQ2_0267 acyl carrier protein
YP_002506827.1	PFAM: metallophosphoesterase; 5'-nucleotidase domain protein; KEGG: afl:Aflv_2607 protein UshA precursor (two S-layer domains; UDP-sugar hydrolase; 5'-nucleotidase)
YP_002506828.1	PFAM: protein of unknown function DUF990; KEGG: cpy:Cphy_0980 hypothetical protein
YP_002506829.1	PFAM: protein of unknown function DUF990; KEGG: cpy:Cphy_0979 hypothetical protein
YP_002506830.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: sth:STH2664 ABC transporter ATP-binding protein
YP_002506831.1	PFAM: regulatory protein LuxR; KEGG: tex:Teth514_0348 regulatory protein, LuxR
YP_002506832.1	KEGG: tex:Teth514_0348 regulatory protein, LuxR
YP_002506833.1	PFAM: beta-lactamase; KEGG: cpy:Cphy_0866 beta-lactamase
YP_002506834.1	PFAM: chemotaxis sensory transducer; KEGG: bat:BAS3056 methyl-accepting chemotaxis protein
YP_002506835.1	PFAM: regulatory protein TetR; KEGG: cno:NT01CX_1607 transcriptional regulator
YP_002506836.1	TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: cac:CAC3368 permease
YP_002506837.1	KEGG: cch:Cag_0738 VCBS
YP_002506838.1	PFAM: ricin B lectin; cellulosome protein dockerin type I; KEGG: scl:sce5172  secreted protein
YP_002506841.1	TIGRFAM: diaminopimelate dehydrogenase; KEGG: cth:Cthe_0922 diaminopimelate dehydrogenase
YP_002506842.1	TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: dvl:Dvul_0681 diaminopimelate decarboxylase
YP_002506843.1	PFAM: transcriptional regulator TrmB; KEGG: drm:Dred_3250 TrmB family transcriptional regulator
YP_002506845.1	PFAM: protein of unknown function DUF58; KEGG: tpd:Teth39_1921 hypothetical protein
YP_002506846.1	PFAM: ATPase associated with various cellular activities AAA_3; ATPase AAA; KEGG: tte:TTE0367 MoxR-like ATPase
YP_002506847.1	KEGG: cth:Cthe_1214 hypothetical protein
YP_002506848.1	KEGG: cth:Cthe_1215 permease
YP_002506849.1	PFAM: protein of unknown function UPF0118; KEGG: lsp:Bsph_4383 hypothetical protein
YP_002506850.1	PFAM: metallophosphoesterase; KEGG: mma:MM_3285 hypothetical protein
YP_002506851.1	KEGG: cac:CAC2257 hypothetical protein
YP_002506852.1	PFAM: flavodoxin/nitric oxide synthase; KEGG: rci:RCIX1229 flavodoxin
YP_002506853.1	TIGRFAM: glutamate synthase (NADPH), homotetrameric; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cth:Cthe_0372 sulfide dehydrogenase (flavoprotein) subunit SudA
YP_002506854.1	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD-binding domain protein; KEGG: cth:Cthe_0373 ferredoxin--NADP(+) reductase subunit alpha
YP_002506855.1	PFAM: peptidase M50; KEGG: cth:Cthe_0098 peptidase M50
YP_002506856.1	PFAM: peptidase M23; KEGG: cth:Cthe_0097 peptidase M23B
YP_002506857.1	TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: mat:MARTH_orf138 cytosine-specific methyltransferase, related to HhaI
YP_002506859.1	PFAM: integrase; KEGG: lpf:lpl2033 hypothetical protein
YP_002506860.1	KEGG: mat:MARTH_orf139 hypothetical protein
YP_002506861.1	PFAM: integrase; KEGG: lpf:lpl2033 hypothetical protein
YP_002506862.1	KEGG: mat:MARTH_orf139 hypothetical protein
YP_002506864.1	PFAM: MGS domain protein; KEGG: cth:Cthe_0095 methylglyoxal synthase
YP_002506865.1	TIGRFAM: cell division topological specificity factor MinE; PFAM: septum formation topological specificity factor MinE; KEGG: cth:Cthe_0094 cell division topological specificity factor MinE
YP_002506866.1	TIGRFAM: septum site-determining protein MinD; PFAM: cobyrinic acid ac-diamide synthase; KEGG: cth:Cthe_0093 septum site-determining protein MinD
YP_002506867.1	blocks the formation of polar Z-ring septums
YP_002506868.1	TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: cth:Cthe_0091 peptidoglycan glycosyltransferase
YP_002506869.1	TIGRFAM: rod shape-determining protein MreD; KEGG: cth:Cthe_0090 hypothetical protein
YP_002506870.1	TIGRFAM: rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; KEGG: cth:Cthe_0089 rod shape-determining protein MreC
YP_002506871.1	functions in MreBCD complex in some organisms
YP_002506872.1	PFAM: helix-hairpin-helix motif; DNA repair protein RadC; KEGG: aoe:Clos_1766 DNA repair protein RadC
YP_002506873.1	TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: pth:PTH_0815 nucleotide-binding protein
YP_002506874.1	PFAM: negative regulator of genetic competence; KEGG: cth:Cthe_0085 negative regulator of genetic competence
YP_002506875.1	TIGRFAM: tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: bcy:Bcer98_0765 tartrate dehydrogenase
YP_002506876.1	KEGG: cth:Cthe_0082 Lon-A peptidase; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16; ATPase AAA central domain protein; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA
YP_002506877.1	TIGRFAM: pyruvate kinase; PFAM: PEP-utilising protein mobile region; pyruvate kinase barrel; pyruvate kinase alpha/beta; KEGG: csc:Csac_1831 pyruvate kinase
YP_002506878.1	PFAM: sodium:neurotransmitter symporter; KEGG: chy:CHY_0068 sodium transporter family protein
YP_002506879.1	catalyzes the formation of citrate from acetyl-CoA and oxaloacetate
YP_002506880.1	PFAM: SEC-C motif domain protein; KEGG: cth:Cthe_0060 hypothetical protein
YP_002506881.1	KEGG: hmo:HM1_2071 hypothetical protein
YP_002506882.1	catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_002506883.1	catalyzes the formation of asparagine from aspartate and ammonia
YP_002506884.1	Converts isocitrate to alpha ketoglutarate
YP_002506885.1	PFAM:  carbohydrate binding; glycosyltransferase 36; glycosyltransferase 36 associated; KEGG: tex:Teth514_0980  carbohydrate binding
YP_002506886.1	KEGG: cno:NT01CX_0017 hypothetical protein
YP_002506887.1	PFAM: thioesterase superfamily protein; KEGG: cbe:Cbei_2899 thioesterase superfamily protein
YP_002506888.1	KEGG: cpy:Cphy_1044 hypothetical protein
YP_002506889.1	TIGRFAM: pyruvate formate-lyase activating enzyme; PFAM: radical SAM protein; KEGG: cth:Cthe_0506 pyruvate formate-lyase activating enzyme
YP_002506890.1	TIGRFAM: formate acetyltransferase; PFAM: formate C-acetyltransferase glycine radical; pyruvate formate-lyase PFL; KEGG: cth:Cthe_0505 formate acetyltransferase
YP_002506891.1	KEGG: bte:BTH_II0957 outer membrane protein
YP_002506893.1	PFAM: peptidase M48 Ste24p; KEGG: cac:CAC0557 Zn-dependent protease with chaperone function
YP_002506894.1	TIGRFAM: isoaspartyl dipeptidase; PFAM: amidohydrolase; amidohydrolase; KEGG: tpd:Teth39_1494 isoaspartyl dipeptidase
YP_002506895.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cno:NT01CX_0934 ABC transporter
YP_002506896.1	TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: cbb:CLD_2608 His/Glu/Gln/Arg/opine ABC transporter permease
YP_002506897.1	PFAM: extracellular solute-binding protein family 3; KEGG: aoe:Clos_0183 extracellular solute-binding protein
YP_002506898.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: amt:Amet_3113 ErfK/YbiS/YcfS/YnhG family protein
YP_002506899.1	catalyzes the formation of aspartate semialdehyde from aspartyl phosphate
YP_002506900.1	KEGG: swo:Swol_0580 hypothetical protein
YP_002506901.1	TIGRFAM: endoribonuclease L-PSP; PFAM: endoribonuclease L-PSP; KEGG: mta:Moth_1495 endoribonuclease L-PSP
YP_002506902.1	Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway
YP_002506903.1	TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: tte:TTE2002 glycerol kinase
YP_002506904.1	PFAM: branched-chain amino acid transport; KEGG: cth:Cthe_1427 branched-chain amino acid transport
YP_002506905.1	PFAM: AzlC family protein; KEGG: cbt:CLH_2216 AzlC family protein
YP_002506906.1	KEGG: cbf:CLI_3231 hypothetical protein
YP_002506907.1	KEGG: cbf:CLI_3233 hypothetical protein
YP_002506908.1	PFAM: radical SAM protein; KEGG: cbf:CLI_3234 radical SAM domain-containing protein
YP_002506910.1	PFAM: protein of unknown function DUF124; KEGG: cts:Ctha_1472 protein of unknown function DUF124
YP_002506911.1	catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate)
YP_002506912.1	PFAM: regulatory protein GntR HTH; KEGG: nth:Nther_0732 GntR family transcriptional regulator
YP_002506913.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: amt:Amet_1324 ABC transporter
YP_002506914.1	KEGG: amt:Amet_1325 hypothetical protein
YP_002506915.1	KEGG: cbf:CLI_1290 hypothetical protein
YP_002506916.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cpy:Cphy_0186 ABC transporter
YP_002506917.1	PFAM: regulatory protein GntR HTH; KEGG: aoe:Clos_0645 GntR family transcriptional regulator
YP_002506918.1	KEGG: oih:OB1131 hypothetical protein
YP_002506919.1	PFAM: glycerate kinase; KEGG: cth:Cthe_1592 glycerate kinase
YP_002506920.1	TIGRFAM: 6-phosphofructokinase; PFAM: phosphofructokinase; KEGG: cth:Cthe_1261 6-phosphofructokinase
YP_002506921.1	catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine
YP_002506922.1	PFAM: glycoside hydrolase family 43; KEGG: cbe:Cbei_4973 alpha-N-arabinofuranosidase
YP_002506923.1	PFAM: methyltransferase type 11; KEGG: swp:swp_3034 rRNA (guanine-N(1)-)-methyltransferase
YP_002506924.1	PFAM: acyltransferase 3; KEGG: sgo:SGO_2012 transmembrane protein
YP_002506925.1	PFAM: acyltransferase 3; KEGG: cac:CAC1402 hypothetical protein
YP_002506926.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: aoe:Clos_0849 short-chain dehydrogenase/reductase SDR
YP_002506927.1	TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; KEGG: cth:Cthe_1225 translation initiation factor 3
YP_002506928.1	PFAM: transposase IS3/IS911 family protein; KEGG: cth:Cthe_0590 transposase IS3/IS911
YP_002506929.1	PFAM: glycoside hydrolase family 9; cellulosome protein dockerin type I; glycoside hydrolase family 9 domain protein Ig domain protein; KEGG: cth:Cthe_0624 glycoside hydrolase family protein
YP_002506930.1	KEGG: fma:FMG_1597 hypothetical protein
YP_002506932.1	KEGG: cth:Cthe_0517 hypothetical protein
YP_002506933.1	PFAM: IS66 Orf2 family protein; KEGG: cth:Cthe_0516 IS66 Orf2 like
YP_002506934.1	PFAM: transposase IS66; KEGG: cth:Cthe_0515 transposase IS66
YP_002506935.1	KEGG: ENSAPMG00000006632.
YP_002506936.1	KEGG: ctc:pE88_37  membrane-spanning permease
YP_002506937.1	KEGG: ctc:pE88_35  membrane-spanning permease
YP_002506939.1	KEGG: csc:Csac_2638 PKD domain-containing protein
YP_002506940.1	PFAM: S-layer domain protein; KEGG: amt:Amet_3262 NLP/P60 protein
YP_002506941.1	KEGG: cpy:Cphy_1095 signal peptidase I
YP_002506942.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: cpy:Cphy_1094 ECF subfamily RNA polymerase sigma-24 factor
YP_002506943.1	PFAM: chemotaxis sensory transducer; KEGG: cth:Cthe_0266 methyl-accepting chemotaxis sensory transducer
YP_002506944.1	PFAM: regulatory protein MerR; transcription activator effector binding; KEGG: cbb:CLD_2330 MerR family transcriptional regulator
YP_002506945.1	KEGG: dsy:DSY1956 hypothetical protein
YP_002506946.1	SMART: hypothetical protein; KEGG: dsy:DSY1958 hypothetical protein
YP_002506947.1	PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; S-layer domain protein; KEGG: gme:Gmet_0749 peptidase S8 and S53, subtilisin, kexin, sedolisin
YP_002506948.1	TIGRFAM: cell wall/surface repeat protein; PFAM: S-layer domain protein; Listeria/Bacterioides repeat protein; KEGG: lin:lin2724 internalin-like protein
YP_002506950.1	PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: dsy:DSY1957 hypothetical protein
YP_002506951.1	KEGG: dsy:DSY1956 hypothetical protein
YP_002506952.1	KEGG: tde:TDE1306 hypothetical protein
YP_002506954.1	PFAM: transglutaminase; KEGG: ppr:PBPRA1946 hypothetical protein
YP_002506955.1	KEGG: cpy:Cphy_3139 hypothetical protein
YP_002506957.1	PFAM: amidase; KEGG: ana:all7525 amidase
YP_002506958.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: vvy:VVA1253 hypothetical protein
YP_002506959.1	KEGG: cpf:CPF_1493 hypothetical protein
YP_002506960.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: cbl:CLK_3452 sensory transduction histidine kinase
YP_002506961.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cbk:CLL_A1387 regulatory protein VanR
YP_002506962.1	PFAM: beta-lactamase; KEGG: cbl:CLK_3450  beta-lactamase
YP_002506963.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dsy:DSY1761 hypothetical protein
YP_002506964.1	PFAM: transporter permease; KEGG: dsy:DSY1762 hypothetical protein
YP_002506965.1	PFAM: transporter permease; KEGG: dsy:DSY1763 hypothetical protein
YP_002506966.1	PFAM: periplasmic binding protein; KEGG: dsy:DSY1764 hypothetical protein
YP_002506967.1	KEGG: cth:Cthe_0078 hypothetical protein
YP_002506968.1	TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; KEGG: cth:Cthe_1225 translation initiation factor 3
YP_002506971.1	PFAM: carbohydrate-binding family 9; KEGG: cth:Cthe_0912 glycoside hydrolase family protein
YP_002506972.1	PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cdf:CD1758 radical SAM-superfamily protein
YP_002506973.1	KEGG: dsy:DSY0048 hypothetical protein
YP_002506974.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: cdf:CD1725 AraC family transcription regulator
YP_002506975.1	PFAM: transposase IS116/IS110/IS902 family protein; KEGG: tte:TTE1030 transposase
YP_002506976.1	PFAM: transposase mutator type; KEGG: glo:Glov_3450 transposase mutator type
YP_002506977.1	PFAM: integrase; KEGG: lpf:lpl2033 hypothetical protein
YP_002506978.1	PFAM: helix-turn-helix- domain containing protein AraC type; transcription activator effector binding; KEGG: cpy:Cphy_2556 AraC family transcriptional regulator
YP_002506979.1	PFAM: VanZ family protein; KEGG: cbl:CLK_2172 VanZ family membrane protein
YP_002506980.1	KEGG: amt:Amet_4173 hypothetical protein
YP_002506981.1	PFAM: inner-membrane translocator; KEGG: gka:GK1908 L-arabinose ABC transporter (permease)
YP_002506982.1	PFAM: integrase; KEGG: lpf:lpl2033 hypothetical protein
YP_002506983.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK1909 ABC transporter ATP-binding protein
YP_002506984.1	KEGG: rle:RL3617  solute-binding component of ABC transporter
YP_002506985.1	PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: csc:Csac_0239 DeoR family transcriptional regulator
YP_002506986.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ctc:CTC02350 ribose transport ATP-binding protein RbsA
YP_002506987.1	PFAM: integrase; KEGG: lpf:lpl2033 hypothetical protein
YP_002506988.1	PFAM: integrase; KEGG: lpf:lpl2033 hypothetical protein
YP_002506989.1	PFAM: transposase IS3/IS911 family protein; KEGG: drm:Dred_1014 transposase IS3/IS911 family protein
YP_002506990.1	PFAM: filamentation induced by cAMP protein Fic; KEGG: acl:ACL_0438 Fic-domain containing protein
YP_002506991.1	KEGG: hmo:HM1_0131 resolvase, N-terminal:recombinase
YP_002506992.1	PFAM: transposase IS3/IS911 family protein; KEGG: cth:Cthe_0590 transposase IS3/IS911
YP_002506993.1	PFAM: transposase IS116/IS110/IS902 family protein; KEGG: tte:TTE1030 transposase
YP_002506994.1	PFAM: transposase IS3/IS911 family protein; KEGG: cth:Cthe_0590 transposase IS3/IS911
YP_002506995.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bat:BAS3158 ABC transporter ATP-binding protein
YP_002506996.1	KEGG: cth:Cthe_0517 hypothetical protein
YP_002506997.1	PFAM: IS66 Orf2 family protein; KEGG: cth:Cthe_0516 IS66 Orf2 like
YP_002506998.1	PFAM: transposase IS66; KEGG: cth:Cthe_0515 transposase IS66
YP_002506999.1	PFAM: integrase; KEGG: lpf:lpl2033 hypothetical protein
YP_002507000.1	PFAM: SMC domain protein; KEGG: chu:CHU_0040 ATPase involved in DNA repair
YP_002507001.1	KEGG: sbn:Sbal195_4565 hypothetical protein
YP_002507002.1	KEGG: plu:plu4346 hypothetical protein
YP_002507003.1	KEGG: sbn:Sbal195_4563 beta-lactamase domain-containing protein
YP_002507006.1	KEGG: swo:Swol_2268 hypothetical protein
YP_002507007.1	KEGG: btl:BALH_0836 hypothetical protein
YP_002507008.1	KEGG: btl:BALH_0835 hypothetical protein
YP_002507010.1	KEGG: cyt:cce_4310 hypothetical protein
YP_002507011.1	KEGG: lsp:Bsph_2414 hypothetical protein
YP_002507012.1	KEGG: aoe:Clos_0102 hypothetical protein
YP_002507013.1	PFAM: restriction modification system DNA specificity domain; KEGG: lsl:LSL_0915 type I restriction-modification system specificity subunit
YP_002507014.1	PFAM: integrase family protein; KEGG: lwe:lwe0480 bacteriophage integrase
YP_002507015.1	PFAM: restriction modification system DNA specificity domain; KEGG: cbk:CLL_A2082 Sau1hsdS1
YP_002507016.1	TIGRFAM: type I restriction-modification system, M subunit; PFAM: N-6 DNA methylase; KEGG: llm:llmg_0659  type I site-specific deoxyribonuclease
YP_002507017.1	KEGG: llm:llmg_0658 type I restriction-modification system restriction subunit; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: type III restriction protein res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases
YP_002507018.1	PFAM: Resolvase domain; Recombinase; KEGG: dsy:DSY3426 hypothetical protein
YP_002507019.1	PFAM: Recombinase; KEGG: dsy:DSY3427 hypothetical protein
YP_002507020.1	PFAM: Resolvase domain; Recombinase; KEGG: dsy:DSY4592 hypothetical protein
YP_002507021.1	KEGG: bca:BCE_0416 hypothetical protein
YP_002507022.1	PFAM: Resolvase domain; KEGG: hmo:HM1_0135 hypothetical protein
YP_002507023.1	PFAM: sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: efa:EF2290 ECF subfamily RNA polymerase sigma factor
YP_002507026.1	KEGG: hmo:HM1_0623 hypothetical protein
YP_002507027.1	PFAM: TRAG family protein; KEGG: hmo:HM1_0622 TraG/TraD family protein
YP_002507028.1	KEGG: cdf:CD3213 hypothetical protein
YP_002507029.1	KEGG: ckl:CKL_3863 hypothetical protein
YP_002507030.1	TIGRFAM: arsenic resistance protein; PFAM: Bile acid:sodium symporter; KEGG: cbe:Cbei_2112 arsenic resistance protein
YP_002507031.1	KEGG: cpr:CPR_0876 hypothetical protein
YP_002507032.1	KEGG: ckl:CKL_3870 hypothetical protein
YP_002507033.1	KEGG: hmo:HM1_0617 hypothetical protein
YP_002507034.1	KEGG: hmo:HM1_0614 hypothetical protein
YP_002507035.1	PFAM: NLP/P60 protein; KEGG: dsy:DSY0034 hypothetical protein
YP_002507036.1	PFAM: RNA-directed DNA polymerase (Reverse transcriptase); SMART: HNH nuclease; KEGG: efa:EF2326 group II intron reverse transcriptase maturase
YP_002507037.1	KEGG: dsy:DSY4546 hypothetical protein
YP_002507038.1	KEGG: hmo:HM1_0605 hypothetical protein
YP_002507039.1	KEGG: hmo:HM1_0601 hypothetical protein
YP_002507040.1	PFAM: pirin; KEGG: fma:FMG_0205  pirin
YP_002507041.1	SMART: hypothetical protein; KEGG: gtn:GTNG_2257 hypothetical protein
YP_002507042.1	KEGG: mac:MA2044 hypothetical protein
YP_002507043.1	KEGG: cja:CJA_3689 hypothetical protein
YP_002507044.1	KEGG: hmo:HM1_0599 hypothetical protein
YP_002507046.1	KEGG: ckl:CKL_3882 hypothetical protein
YP_002507047.1	KEGG: dsy:DSY4556 hypothetical protein
YP_002507048.1	KEGG: hmo:HM1_0593 hypothetical protein
YP_002507049.1	KEGG: dsy:DSY4557 hypothetical protein
YP_002507050.1	KEGG: hmo:HM1_0591 hypothetical protein
YP_002507052.1	KEGG: hmo:HM1_0589 hypothetical protein
YP_002507053.1	KEGG: hmo:HM1_0588 hypothetical protein
YP_002507054.1	PFAM: type II secretion system protein E; KEGG: hmo:HM1_0587 type II/IV secretion system protein
YP_002507055.1	KEGG: hmo:HM1_0586 hypothetical protein
YP_002507056.1	PFAM: SAF domain protein; KEGG: hmo:HM1_0585 hypothetical protein
YP_002507057.1	PFAM: peptidase A24A prepilin type IV; KEGG: hmo:HM1_0584 type IV prepilin-like proteins leader peptide-processing enzyme
YP_002507058.1	KEGG: hmo:HM1_0583 hypothetical protein
YP_002507059.1	PFAM: SpoVG family protein; KEGG: hmo:HM1_0580 SpoVG septation protein
YP_002507060.1	KEGG: hmo:HM1_0579 hypothetical protein
YP_002507061.1	PFAM: S-layer domain protein; SMART: PKD domain containing protein; KEGG: hmo:HM1_0578 hypothetical protein
YP_002507062.1	KEGG: hmo:HM1_0577 hypothetical protein
YP_002507063.1	PFAM: SpoVT/AbrB domain protein; KEGG: hmo:HM1_0576 stage V sporulation protein T
YP_002507064.1	KEGG: hmo:HM1_0575 hypothetical protein
YP_002507065.1	PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: hmo:HM1_0574 d12 class n6 adenine-specific DNA methyltransferase superfamily protein
YP_002507066.1	KEGG: hmo:HM1_0573 hypothetical protein
YP_002507068.1	PFAM: hypothetical protein; KEGG: tpd:Teth39_0032 XRE family transcriptional regulator
YP_002507070.1	KEGG: cth:Cthe_2161 hypothetical protein
YP_002507071.1	PFAM: hypothetical protein; KEGG: chy:CHY_1862 DNA-binding protein
YP_002507073.1	KEGG: mbu:Mbur_0532 hypothetical protein
YP_002507075.1	PFAM: Accessory gene regulator B; KEGG: cth:Cthe_2358 accessory gene regulator B
YP_002507076.1	PFAM: methyltransferase type 11; KEGG: bsu:BSU01510 hypothetical protein
YP_002507077.1	TIGRFAM: polymorphic outer membrane protein; PFAM: polymorphic membrane protein Chlamydia; KEGG: msi:Msm_1188 adhesin-like protein
YP_002507078.1	KEGG: LOC100051265; similar to glycosyltransferase-like 1
YP_002507079.1	KEGG: sso:SSO1618 glycosyltransferase
YP_002507080.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; Male sterility domain; KEGG: cac:CAC0794 nucleoside-diphosphate-sugar epimerase (UDP-glucose 4-epimerase)
YP_002507081.1	TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: ckl:CKL_3169 polysaccharide biosynthesis protein
YP_002507082.1	PFAM: DNA polymerase beta domain protein region; KEGG: ckl:CKL_2614 streptomycin 3''-adenylyltransferase
YP_002507083.1	PFAM: GCN5-related N-acetyltransferase; protein of unknown function UPF0157; KEGG: ckl:CKL_2615 hypothetical protein
YP_002507084.1	PFAM: UbiE/COQ5 methyltransferase; methyltransferase type 11; methyltransferase type 12; KEGG: ckl:CKL_2616 methyltransferase
YP_002507085.1	PFAM: DNA polymerase beta domain protein region; KEGG: ckl:CKL_2617 hypothetical protein
YP_002507086.1	KEGG: dde:Dde_0890 hypothetical protein
YP_002507087.1	KEGG: amt:Amet_3967 hypothetical protein
YP_002507088.1	PFAM: Resolvase domain; Recombinase; KEGG: ckl:CKL_2620 hypothetical protein
YP_002507089.1	PFAM: Recombinase; KEGG: bca:BCE_0418 hypothetical protein
YP_002507090.1	PFAM: Resolvase domain; Recombinase; KEGG: ckl:CKL_2622 hypothetical protein
YP_002507091.1	KEGG: ckl:CKL_2623 hypothetical protein
YP_002507092.1	PFAM: N-acetylmuramoyl-L-alanine amidase family 2; sporulation domain protein; KEGG: bca:BCE_0415 N-acetylmuramoyl-L-alanine amidase domain-containing protein
YP_002507093.1	TIGRFAM: toxin secretion/phage lysis holin; PFAM: Holin toxin secretion/phage lysis; KEGG: hmo:HM1_2868 holin, toxin secretion/phage lysis family protein
YP_002507094.1	KEGG: hmo:HM1_2974 hypothetical protein
YP_002507095.1	KEGG: hmo:HM1_2973 hypothetical protein
YP_002507096.1	KEGG: hmo:HM1_2972 hypothetical protein
YP_002507097.1	TIGRFAM: phage minor structural protein; KEGG: hmo:HM1_2971 phage minor structural protein, N-terminal
YP_002507098.1	TIGRFAM: phage tail component; KEGG: hmo:HM1_2970 phage tail protein
YP_002507099.1	KEGG: bca:BCE_0409 hypothetical protein
YP_002507100.1	KEGG: hmo:HM1_2968 hypothetical protein
YP_002507101.1	KEGG: hmo:HM1_2967 hypothetical protein
YP_002507102.1	TIGRFAM: phage major tail protein, phi13 family; KEGG: hmo:HM1_2966 phi13 family phage major tail protein
YP_002507103.1	KEGG: hmo:HM1_2965 hypothetical protein
YP_002507104.1	TIGRFAM: phage protein, HK97 gp10 family; KEGG: hmo:HM1_2964 HK97 family phage protein
YP_002507105.1	TIGRFAM: phage head-tail adaptor; PFAM:  head-tail adaptor protein; KEGG: tex:Teth514_1257 phage head-tail adaptor
YP_002507106.1	TIGRFAM:  phage protein ( DNA packaging); KEGG: bca:BCE_0402 phage protein DNA packaging protein
YP_002507107.1	KEGG: bca:BCE_0401 hypothetical protein
YP_002507108.1	TIGRFAM: phage major capsid protein, HK97 family; PFAM: major capsid protein HK97; KEGG: bca:BCE_0400 HK97 family phage major capsid protein
YP_002507109.1	PFAM: peptidase S14 ClpP; KEGG: bca:BCE_0399 ClpP protease family protein
YP_002507110.1	TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein; KEGG: bca:BCE_0398 HK97 family phage portal protein
YP_002507111.1	PFAM: terminase; KEGG: bca:BCE_0397 phage terminase, large subunit
YP_002507112.1	KEGG: bca:BCE_0396 hypothetical protein
YP_002507113.1	KEGG: tex:Teth514_1247 hypothetical protein
YP_002507114.1	KEGG: bca:BCE_0394 hypothetical protein
YP_002507115.1	TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: bca:BCE_0393 DNA-cytosine methyltransferase
YP_002507116.1	PFAM: DNA methylase N-4/N-6 domain protein; ParB domain protein nuclease; KEGG: bca:BCE_0392 DNA methylase, family protein
YP_002507117.1	catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase
YP_002507118.1	KEGG: ckl:CKL_2651 hypothetical protein
YP_002507119.1	PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: bca:BCE_0389 HNH endonuclease domain-containing protein
YP_002507120.1	KEGG: ckl:CKL_2654 hypothetical protein
YP_002507121.1	KEGG: bca:BCE_0387 hypothetical protein
YP_002507122.1	PFAM: SNF2-related protein; SMART: DEAD-like helicases; KEGG: ckl:CKL_2656 phage-related DNA helicase
YP_002507123.1	PFAM: VRR-NUC domain protein; KEGG: ckl:CKL_2657 hypothetical protein
YP_002507124.1	PFAM: virulence-associated E family protein; KEGG: bca:BCE_0384 virulence-associated protein E
YP_002507125.1	KEGG: bca:BCE_0383 hypothetical protein
YP_002507126.1	PFAM: phage antirepressor protein; AntA/AntB antirepressor domain protein; KEGG: bca:BCE_0382 phage antirepressor protein
YP_002507127.1	KEGG: bca:BCE_0380 hypothetical protein
YP_002507128.1	KEGG: bca:BCE_0379 hypothetical protein
YP_002507129.1	PFAM: regulatory protein TetR; KEGG: bca:BCE_0378 TetR family transcriptional regulator
YP_002507130.1	PFAM: DNA-directed DNA polymerase; KEGG: bca:BCE_0377 DNA polymerase I
YP_002507131.1	PFAM: HNH endonuclease; NUMOD4 domain protein; KEGG: amt:Amet_4010 NUMOD4 domain-containing protein
YP_002507132.1	KEGG: bca:BCE_0376 hypothetical protein
YP_002507133.1	KEGG: ckl:CKL_2663 hypothetical protein
YP_002507134.1	KEGG: bca:BCE_0374 rRNA biogenesis protein rrp5
YP_002507135.1	KEGG: ckl:CKL_2665 hypothetical protein
YP_002507136.1	KEGG: ckl:CKL_2666 hypothetical protein
YP_002507137.1	KEGG: ckl:CKL_2667 hypothetical protein
YP_002507138.1	KEGG: ckl:CKL_2668 hypothetical protein
YP_002507139.1	KEGG: ckl:CKL_2669 hypothetical protein
YP_002507140.1	PFAM: Restriction endonuclease MspI; KEGG: ckl:CKL_2670 hypothetical protein
YP_002507141.1	TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: ckl:CKL_2671 DNA methylase
YP_002507142.1	TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; (uracil-5)-methyltransferase; KEGG: cth:Cthe_1751 RNA methyltransferase
YP_002507143.1	KEGG: cth:Cthe_0894 hypothetical protein
YP_002507144.1	PFAM: uracil-DNA glycosylase; KEGG: sth:STH940 G/U mismatch-specific DNA glycosylase
YP_002507145.1	KEGG: ctc:CTC01970 membrane associated protein
YP_002507146.1	KEGG: cno:NT01CX_1826 hypothetical protein
YP_002507147.1	PFAM: membrane protein of unknown function; KEGG: cth:Cthe_2067 hypothetical protein
YP_002507148.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bwe:BcerKBAB4_1871 methyl-accepting chemotaxis sensory transducer with cache sensor
YP_002507149.1	PFAM: peptidase M23; KEGG: cth:Cthe_1757 peptidase M23B
YP_002507150.1	PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: cth:Cthe_1760 1A family penicillin-binding protein
YP_002507151.1	catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis
YP_002507152.1	KEGG: dsy:DSY1039 hypothetical protein
YP_002507153.1	EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene
YP_002507154.1	TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; KEGG: cth:Cthe_1795 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase
YP_002507155.1	PFAM: amino acid-binding ACT domain protein; prephenate dehydrogenase; KEGG: cth:Cthe_1796 prephenate dehydrogenase
YP_002507156.1	modulates transcription in response to the NADH/NAD(+) redox state
YP_002507157.1	PFAM: glycosyl transferase group 1; polysaccharide pyruvyl transferase; KEGG: cth:Cthe_2702 polysaccharide pyruvyl transferase
YP_002507158.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cth:Cthe_1799 ABC transporter
YP_002507159.1	PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: cno:NT01CX_0098 3-oxoacyl-(acyl-carrier-protein) synthase III
YP_002507160.1	PFAM: chemotaxis sensory transducer; KEGG: cbt:CLH_3030 methyl-accepting chemotaxis protein
YP_002507161.1	PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: cno:NT01CX_0098 3-oxoacyl-(acyl-carrier-protein) synthase III
YP_002507162.1	PFAM: chemotaxis sensory transducer; KEGG: cbk:CLL_A3277 methyl-accepting chemotaxis protein
YP_002507163.1	PFAM: integrase; KEGG: lpf:lpl2033 hypothetical protein
YP_002507164.1	PFAM: cell wall hydrolase/autolysin; KEGG: cth:Cthe_1804 cell wall hydrolase/autolysin
YP_002507167.1	SMART: leucine-rich repeat-containing protein typical subtype; chitinase II; KEGG: cpy:Cphy_1815 leucine-rich repeat-containing protein
YP_002507168.1	KEGG: swo:Swol_0655 hypothetical protein
YP_002507169.1	KEGG: cth:Cthe_0453 hypothetical protein
YP_002507170.1	KEGG: cth:Cthe_0453 hypothetical protein
YP_002507172.1	KEGG: cth:Cthe_0453 hypothetical protein
YP_002507173.1	KEGG: cth:Cthe_0263 hypothetical protein
YP_002507174.1	PFAM: Hsp33 protein; KEGG: cth:Cthe_1852 HSP33 protein
YP_002507175.1	PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: cth:Cthe_1853 cold-shock DNA-binding protein family protein
YP_002507176.1	PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: cth:Cthe_1855 methyltransferase type 11
YP_002507177.1	KEGG: cth:Cthe_1856 small acid-soluble spore protein beta
YP_002507178.1	TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; KEGG: cth:Cthe_1857 carboxyl-terminal protease
YP_002507179.1	PFAM: peptidase M23; KEGG: cth:Cthe_1858 peptidase M23B
YP_002507180.1	PFAM: protein of unknown function DUF214; KEGG: cth:Cthe_1859 cell division protein FtsX
YP_002507181.1	KEGG: cth:Cthe_1860 cell division ATP-binding protein FtsE; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: ATPase AAA
YP_002507182.1	PFAM: helix-turn-helix Fis-type; KEGG: cth:Cthe_1861 CdaR family transcriptional regulator
YP_002507183.1	PFAM: ABC transporter; TOBE domain protein; transport-associated OB domain protein; SMART: ATPase AAA; KEGG: cth:Cthe_1862 ABC transporter
YP_002507184.1	catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis
YP_002507185.1	catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate
YP_002507186.1	TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: cth:Cthe_1866 acetylornithine aminotransferase
YP_002507187.1	TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; carbamoyl-phosphate synthase small chain; KEGG: cth:Cthe_1867 carbamoyl-phosphate synthase small subunit
YP_002507188.1	TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; protein of unknown function DUF201; carbamoyl-phosphate synthase L chain ATP-binding; carbamoyl-phosphate synthetase large chain oligomerisation; carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; RimK domain protein ATP-grasp; KEGG: cth:Cthe_1868 carbamoyl-phosphate synthase large subunit
YP_002507189.1	TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; KEGG: cth:Cthe_1869 ornithine carbamoyltransferase
YP_002507190.1	PFAM: GCN5-related N-acetyltransferase; KEGG: cth:Cthe_1870 GCN5-related N-acetyltransferase
YP_002507191.1	KEGG: sth:STH1943 hypothetical protein
YP_002507192.1	TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit; PFAM: Prismane; KEGG: amt:Amet_1177 carbon-monoxide dehydrogenase, catalytic subunit
YP_002507193.1	KEGG: sth:STH1266 hypothetical protein
YP_002507194.1	PFAM: protein of unknown function DUF161; KEGG: cth:Cthe_2703 hypothetical protein
YP_002507195.1	TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: cth:Cthe_2701 N-acetylmannosaminyltransferase
YP_002507196.1	KEGG: lsp:Bsph_2834 hypothetical protein
YP_002507197.1	KEGG: aoe:Clos_2272 hypothetical protein
YP_002507198.1	PFAM: PemK family protein; KEGG: cth:Cthe_2699 MazF family transcriptional regulator
YP_002507199.1	PFAM: CopG domain protein DNA-binding domain protein; KEGG: aoe:Clos_2274 CopG family transcriptional regulator
YP_002507200.1	converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer
YP_002507201.1	TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: cth:Cthe_2696 carbohydrate kinase, YjeF related protein
YP_002507202.1	KEGG: cth:Cthe_2695 hypothetical protein
YP_002507203.1	TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; 6-phosphogluconate dehydrogenase NAD-binding; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: bat:BAS5120 UDP-N-acetyl-D-mannosamine dehydrogenase
YP_002507204.1	KEGG: bat:BAS1576 TPR/glycosyl transferase domain-containing protein
YP_002507205.1	KEGG: pth:PTH_2771 hypothetical protein
YP_002507207.1	PFAM: O-antigen polymerase; KEGG: csc:Csac_2364 O-antigen polymerase
YP_002507208.1	PFAM: cell cycle protein; KEGG: aoe:Clos_2351 cell division membrane protein-like protein
YP_002507209.1	TIGRFAM: transcriptional regulator, PadR-family; PFAM: transcriptional regulator PadR family protein; KEGG: aoe:Clos_2352 PadR-like family transcriptional regulator
YP_002507210.1	KEGG: csc:Csac_0270 hypothetical protein
YP_002507211.1	PFAM: NUDIX hydrolase; NADH pyrophosphatase-like ; Zinc ribbon NADH pyrophosphatase; KEGG: mma:MM_2542 phosphohydrolase
YP_002507212.1	PFAM: heat shock protein Hsp20; KEGG: cbe:Cbei_4123 heat shock protein HSP20
YP_002507213.1	TIGRFAM: stage V sporulation protein B; PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: cth:Cthe_2688 polysaccharide biosynthesis protein
YP_002507214.1	PFAM: NLP/P60 protein; KEGG: dsy:DSY2087 hypothetical protein
YP_002507215.1	PFAM: cell wall hydrolase/autolysin; KEGG: cth:Cthe_1037 cell wall hydrolase/autolysin
YP_002507216.1	TIGRFAM: hypothetical protein; PFAM: dihydrouridine synthase; KEGG: cth:Cthe_2685 nifR3 family TIM-barrel protein
YP_002507217.1	TIGRFAM: toxin secretion/phage lysis holin; PFAM: Holin toxin secretion/phage lysis; KEGG: cpy:Cphy_0798 toxin secretion/phage lysis holin
YP_002507218.1	PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
YP_002507223.1	PFAM: integrase; KEGG: afl:Aflv_2378 transposase
YP_002507224.1	PFAM: transposase IS3/IS911 family protein; KEGG: drm:Dred_1014 transposase IS3/IS911 family protein
YP_002507225.1	KEGG: cbe:Cbei_0914 hypothetical protein
YP_002507226.1	KEGG: cbe:Cbei_0913 hypothetical protein
YP_002507227.1	KEGG: amt:Amet_2418 hypothetical protein
YP_002507228.1	TIGRFAM: phage head-tail adaptor; KEGG: amt:Amet_2417 phage head-tail adaptor
YP_002507229.1	TIGRFAM:  phage protein ( DNA packaging); KEGG: cbk:CLL_A0947 hypothetical protein
YP_002507230.1	TIGRFAM: phage major capsid protein, HK97 family; PFAM: major capsid protein HK97; KEGG: cbk:CLL_A0946 phage major capsid protein, HK97 family
YP_002507232.1	TIGRFAM: phage prohead protease HK97 family; PFAM: peptidase U35 phage prohead HK97; KEGG: cpe:CPE1121 phage phi-C31 GP35-like protein
YP_002507233.1	TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein; KEGG: cbk:CLL_A0944 phage portal protein, HK97 family
YP_002507234.1	PFAM: terminase; KEGG: spa:M6_Spy1141 terminase large subunit
YP_002507235.1	PFAM: integrase; KEGG: lpf:lpl2033 hypothetical protein
YP_002507236.1	KEGG: amt:Amet_2852 phage related protein
YP_002507237.1	KEGG: cpe:CPE1107 hypothetical protein
YP_002507238.1	KEGG: ctc:CTC01564 hypothetical protein
YP_002507241.1	KEGG: cbl:CLK_0861 type I restriction enzyme R protein n terminus (hsdr_n)
YP_002507242.1	KEGG: cth:Cthe_0517 hypothetical protein
YP_002507243.1	PFAM: IS66 Orf2 family protein; KEGG: cth:Cthe_0516 IS66 Orf2 like
YP_002507244.1	PFAM: transposase IS66; KEGG: cth:Cthe_0515 transposase IS66
YP_002507246.1	PFAM: integrase; KEGG: lpf:lpl2033 hypothetical protein
YP_002507248.1	KEGG: cno:NT01CX_0032 hypothetical protein
YP_002507251.1	PFAM: integrase; KEGG: lpf:lpl2033 hypothetical protein
YP_002507252.1	KEGG: bsu:BSU11950 hypothetical protein
YP_002507253.1	KEGG: bsu:BSU20890 hypothetical protein
YP_002507255.1	PFAM: integrase family protein; KEGG: pth:PTH_2135 integrase
YP_002507257.1	KEGG: cbl:CLK_0744 hypothetical protein
YP_002507258.1	KEGG: cth:Cthe_2683 hypothetical protein
YP_002507259.1	KEGG: cth:Cthe_2682 hypothetical protein
YP_002507260.1	KEGG: cth:Cthe_2681 serine phosphatase; TIGRFAM: stage II sporulation protein E; PFAM: stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein
YP_002507261.1	catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate
YP_002507262.1	KEGG: amt:Amet_2970 hypothetical protein
YP_002507264.1	PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: ckl:CKL_2696 protease
YP_002507265.1	KEGG: cbe:Cbei_1948 hypothetical protein
YP_002507266.1	PFAM: protein of unknown function DUF503; KEGG: cpy:Cphy_1545 hypothetical protein
YP_002507267.1	PFAM: protein of unknown function DUF1121; KEGG: cbl:CLK_0192 hypothetical protein
YP_002507268.1	PFAM: protein of unknown function DUF188; KEGG: aoe:Clos_2709 hypothetical protein
YP_002507269.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: sco:SCO6229 sugar transporter permease
YP_002507270.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: llc:LACR_1477 ABC-type sugar transporter, permease
YP_002507271.1	PFAM: extracellular solute-binding protein family 1; KEGG: sco:SCO6231 sugar transporter sugar-binding lipoprotein
YP_002507272.1	PFAM: transposase IS200-family protein; KEGG: cth:Cthe_2031 transposase IS200-like protein
YP_002507273.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bcl:ABC0314 transcriptional regulator
YP_002507274.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: cth:Cthe_2505 LacI family transcription regulator
YP_002507275.1	PFAM: glycosidase PH1107-related; KEGG: tpt:Tpet_1543 glycosidase, PH1107-related
YP_002507276.1	PFAM: N-acylglucosamine 2-epimerase; KEGG: bfr:BF0849  N-acyl-D-glucosamine 2-epimerase
YP_002507277.1	PFAM: glycosidase PH1107-related; KEGG: cja:CJA_0242 hypothetical protein
YP_002507278.1	PFAM: protein of unknown function DUF1980; KEGG: dsy:DSY0109 hypothetical protein
YP_002507279.1	PFAM: permease; KEGG: cbe:Cbei_4662 permease
YP_002507280.1	PFAM: cobalamin synthesis protein P47K; KEGG: cbe:Cbei_2463 cobalamin synthesis protein, P47K
YP_002507281.1	PFAM: ferric-uptake regulator; KEGG: cth:Cthe_0546 ferric uptake regulator family protein
YP_002507282.1	PFAM: GCN5-related N-acetyltransferase; KEGG: npu:Npun_F4186 GCN5-related N-acetyltransferase
YP_002507283.1	PFAM: transcription factor CarD; KEGG: cdf:CD3037  regulatory protein
YP_002507284.1	KEGG: cpy:Cphy_2664 CarD family transcriptional regulator
YP_002507285.1	TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: aoe:Clos_2720 spore germination protein
YP_002507287.1	TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: aoe:Clos_2719 spore germination B3 GerAC family protein
YP_002507288.1	PFAM: GerA spore germination protein; KEGG: aoe:Clos_2718 GerA spore germination protein
YP_002507291.1	PFAM: S-layer domain protein; KEGG: swo:Swol_0298 hypothetical protein
YP_002507292.1	KEGG: hypothetical protein
YP_002507295.1	KEGG: dvu:DVU1121 hypothetical protein
YP_002507297.1	PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
YP_002507300.1	KEGG: mbb:BCG_3414c hypothetical protein
YP_002507301.1	KEGG: mag:amb4272 hypothetical protein
YP_002507304.1	KEGG: hypothetical protein
YP_002507305.1	KEGG: cpf:CPF_0969 KID repeat-containing protein
YP_002507306.1	KEGG: ljo:LJ0323 Lj965 prophage protein
YP_002507307.1	KEGG: dsy:DSY2176 hypothetical protein
YP_002507308.1	KEGG: cpf:CPF_0964 hypothetical protein
YP_002507310.1	KEGG: cpf:CPF_0962 hypothetical protein
YP_002507311.1	KEGG: cpf:CPF_0961 hypothetical protein
YP_002507312.1	KEGG: cpf:CPF_0960 hypothetical protein
YP_002507313.1	KEGG: cpf:CPF_0959 hypothetical protein
YP_002507314.1	KEGG: cpf:CPF_0958 hypothetical protein
YP_002507315.1	KEGG: cpf:CPF_0957 hypothetical protein
YP_002507316.1	KEGG: cpf:CPF_0956  phage major capsid protein
YP_002507317.1	PFAM: minor structural GP20 protein; KEGG: cno:NT01CX_2174 scaffold protein
YP_002507320.1	KEGG: cpf:CPF_0952  phage minor capsid protein
YP_002507321.1	KEGG: cpf:CPF_0951  phage minor capsid protein
YP_002507322.1	KEGG: cpf:CPF_0949  phage terminase, large subunit
YP_002507323.1	PFAM: terminase small subunit; KEGG: bpt:Bpet0975 hypothetical protein
YP_002507325.1	KEGG: ckl:CKL_4074 hypothetical protein
YP_002507327.1	PFAM: SNF2-related protein; SMART: DEAD-like helicases; KEGG: drm:Dred_1198 SNF2-related protein
YP_002507328.1	PFAM: VRR-NUC domain protein; KEGG: cbf:CLI_2427 VRR-NUC domain-containing protein
YP_002507329.1	PFAM: virulence-associated E family protein; KEGG: cbf:CLI_2429  virulence-associated protein E
YP_002507330.1	KEGG: bwe:BcerKBAB4_4105 hypothetical protein
YP_002507331.1	PFAM: DNA methylase N-4/N-6 domain protein; KEGG: drm:Dred_1193 DNA methylase N-4/N-6 domain-containing protein
YP_002507332.1	PFAM: helicase; SMART: DEAD-like helicases; KEGG: drm:Dred_1192 helicase domain-containing protein
YP_002507334.1	PFAM: DNA-directed DNA polymerase; KEGG: drm:Dred_1191 DNA-directed DNA polymerase
YP_002507337.1	KEGG: drm:Dred_1189 hypothetical protein
YP_002507338.1	KEGG: drm:Dred_1188 hypothetical protein
YP_002507339.1	KEGG: drm:Dred_1187 hypothetical protein
YP_002507340.1	KEGG: hit:NTHI1489 hypothetical protein
YP_002507342.1	TIGRFAM: AbrB family transcriptional regulator; PFAM: SpoVT/AbrB domain protein; KEGG: cth:Cthe_2100 AbrB family transcriptional regulator
YP_002507345.1	PFAM: NUMOD4 domain protein; KEGG: ser:SERP1512 HNH endonuclease family protein
YP_002507347.1	SMART: hypothetical protein; KEGG: bat:BAS3545 hypothetical protein
YP_002507348.1	PFAM: hypothetical protein; KEGG: spv:SPH_0073 repressor protein
YP_002507349.1	PFAM: protein of unknown function DUF955; KEGG: sha:SH1806 hypothetical protein
YP_002507350.1	PFAM: Resolvase domain; Recombinase; KEGG: tex:Teth514_0698 recombinase
YP_002507351.1	PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: cth:Cthe_0068 peptidylprolyl isomerase
YP_002507352.1	PFAM: RNA binding S1 domain protein; KEGG: cth:Cthe_2662 RNA binding S1
YP_002507353.1	PFAM: septum formation initiator; KEGG: cth:Cthe_2661 septum formation initiator
YP_002507354.1	KEGG: cth:Cthe_2660 hypothetical protein
YP_002507355.1	TIGRFAM: sporulation protein YabP; PFAM: YabP family protein; KEGG: cth:Cthe_2659 YabP-like protein
YP_002507356.1	PFAM: RNA-binding S4 domain protein; KEGG: cth:Cthe_2658 RNA-binding S4
YP_002507357.1	PFAM: histone family protein DNA-binding protein; KEGG: tpd:Teth39_0249 histone family protein DNA-binding protein
YP_002507358.1	TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: cth:Cthe_2656 MazG family protein
YP_002507359.1	TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: cth:Cthe_2186 single-strand binding protein
YP_002507360.1	TIGRFAM: AbrB family transcriptional regulator; stage V sporulation protein T; PFAM: SpoVT/AbrB domain protein; KEGG: cth:Cthe_2655 AbrB family transcriptional regulator
YP_002507361.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: cth:Cthe_2633 hypothetical protein
YP_002507362.1	KEGG: cth:Cthe_2632 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase; SMART: DEAD-like helicases
YP_002507363.1	Enables the recycling of peptidyl-tRNAs produced at termination of translation
YP_002507364.1	TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; KEGG: cth:Cthe_2630 ribose-phosphate pyrophosphokinase
YP_002507365.1	KEGG: cth:Cthe_2629 UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase
YP_002507366.1	PFAM: SpoVG family protein; KEGG: cth:Cthe_2628 hypothetical protein
YP_002507367.1	TIGRFAM: pur operon repressor; PFAM: phosphoribosyltransferase; purine repressor; KEGG: cth:Cthe_2627 purine operon repressor
YP_002507368.1	Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis
YP_002507369.1	in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP
YP_002507370.1	KEGG: cth:Cthe_2623 exopolysaccharide biosynthesis protein
YP_002507371.1	KEGG: cth:Cthe_2622 hypothetical protein
YP_002507372.1	PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: cth:Cthe_2621 protein of unknown function DUF1078-like protein
YP_002507373.1	PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: cth:Cthe_2620 protein of unknown function DUF1078-like protein
YP_002507374.1	TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; KEGG: cth:Cthe_2619 rod shape-determining protein MreB
YP_002507375.1	TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KEGG: bth:BT_1837  GTP-binding protein,  GTPase
YP_002507376.1	in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and IscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; in Thermotoga this enzyme has an extra C-terminal domain
YP_002507377.1	KEGG: cbe:Cbei_4440 hypothetical protein
YP_002507378.1	KEGG: cbe:Cbei_4697 Zn-finger containing protein
YP_002507379.1	KEGG: tme:Tmel_0283 hypothetical protein
YP_002507380.1	PFAM: sodium/hydrogen exchanger; KEGG: bce:BC4739 Na+/H+ antiporter NapA
YP_002507381.1	PFAM: TrkA-C domain protein; KEGG: mta:Moth_2066 TrkA-C
YP_002507382.1	PFAM: Resolvase domain; Recombinase; KEGG: amt:Amet_4005 resolvase domain-containing protein
YP_002507385.1	KEGG: bce:BC3703 phage protein
YP_002507386.1	PFAM: hypothetical protein; KEGG: ctc:CTC01070 DNA-binding protein
YP_002507387.1	PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: cbe:Cbei_4580  LytTR family transcriptional regulator
YP_002507388.1	KEGG: cth:Cthe_1311 signal transduction histidine kinase regulating citrate/malate metabolism
YP_002507389.1	TIGRFAM: CRISPR-associated protein Cas2; PFAM: protein of unknown function DUF196; KEGG: rsd:TGRD_224 CRISPR-associated protein Cas2
YP_002507390.1	TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; KEGG: asu:Asuc_0377 CRISPR-associated Cas1 family protein
YP_002507391.1	TIGRFAM: CRISPR-associated protein, Csn1 family; KEGG: nmn:NMCC_0397 hypothetical protein
YP_002507392.1	KEGG: stc:str1466 hypothetical protein
YP_002507394.1	KEGG: hmo:HM1_0623 hypothetical protein
YP_002507395.1	KEGG: aoe:Clos_1875 hypothetical protein
YP_002507397.1	PFAM: peptidase M23; KEGG: oih:OB2491 hypothetical protein
YP_002507398.1	KEGG: aoe:Clos_1879 hypothetical protein
YP_002507399.1	KEGG: aoe:Clos_1880 hypothetical protein
YP_002507401.1	TIGRFAM: AbrB family transcriptional regulator; PFAM: SpoVT/AbrB domain protein; KEGG: cbe:Cbei_3375 transcriptional regulator, AbrB family
YP_002507402.1	KEGG: csc:Csac_2638 PKD domain-containing protein
YP_002507403.1	PFAM: S-layer domain protein; KEGG: amt:Amet_3262 NLP/P60 protein
YP_002507410.1	KEGG: drm:Dred_0825 type II secretion system protein E
YP_002507411.1	KEGG: maq:Maqu_2336 septum site-determining protein MinD
YP_002507413.1	KEGG: csc:Csac_2637 hypothetical protein
YP_002507414.1	KEGG: aoe:Clos_1909 hypothetical protein
YP_002507416.1	KEGG: aoe:Clos_1910 hypothetical protein
YP_002507417.1	KEGG: aoe:Clos_1911 hypothetical protein
YP_002507418.1	KEGG: csc:Csac_2619 hypothetical protein
YP_002507421.1	KEGG: efa:EF2316 hypothetical protein
YP_002507423.1	PFAM: DNA methylase N-4/N-6 domain protein; KEGG: psb:Psyr_2825 DNA methylase N-4/N-6
YP_002507424.1	PFAM: TRAG family protein; KEGG: aoe:Clos_1912 TraG family protein
YP_002507425.1	KEGG: tpd:Teth39_0051 hypothetical protein
YP_002507427.1	KEGG: tde:TDE1803 hypothetical protein
YP_002507428.1	KEGG: tpd:Teth39_0047 hypothetical protein
YP_002507431.1	KEGG: tpd:Teth39_0050 hypothetical protein
YP_002507432.1	PFAM: hypothetical protein; KEGG: aoe:Clos_1919 hypothetical protein
YP_002507433.1	SMART: ankyrin; KEGG: LOC586468; similar to ankyrin 2,3/unc44
YP_002507434.1	TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: aoe:Clos_1923 nuclease
YP_002507435.1	PFAM: cobyrinic acid ac-diamide synthase; KEGG: lrf:LAR_0100 chromosome partitioning protein ParA
YP_002507436.1	KEGG: lpc:LPC_0185 hypothetical protein
YP_002507438.1	PFAM: HNH endonuclease; KEGG: mhu:Mhun_1686 HNH endonuclease
YP_002507444.1	KEGG: nar:Saro_0028 XRE family transcriptional regulator
YP_002507448.1	PFAM: helicase; SMART: DEAD-like helicases; KEGG: efa:EF2307 hypothetical protein
YP_002507450.1	KEGG: ctc:CTC01854 transcriptional regulator
YP_002507451.1	TIGRFAM: glycosyltransferase, MGT family; PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; glycosyltransferase 28 domain; KEGG: cbe:Cbei_1729 glycosyltransferase, MGT family
YP_002507452.1	KEGG: cbe:Cbei_3683 cell wall-associated hydrolase-like protein
YP_002507453.1	TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like; KEGG: cbe:Cbei_1431 seryl-tRNA synthetase
YP_002507454.1	TIGRFAM: metal dependent phophohydrolase; KEGG: cpy:Cphy_1236 metal dependent phophohydrolase
YP_002507455.1	PFAM: aminotransferase class I and II; KEGG: cpy:Cphy_0455 aminotransferase class I and II
YP_002507456.1	TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta; KEGG: cpy:Cphy_0011 cysteine synthase A
YP_002507457.1	PFAM: DNA/pantothenate metabolism flavoprotein domain protein; KEGG: efa:EF2655 phosphopantothenate--cysteine ligase
YP_002507458.1	decarboxylates 4-phosphopantothenoylcysteine to form 4'-phosphopantotheine.
YP_002507459.1	catalyzes the formation of biotin from dethiobiotin and sulfur
YP_002507460.1	PFAM: protein of unknown function DUF1696; KEGG: cdi:DIP0385 hypothetical protein
YP_002507461.1	PFAM: PfkB domain protein; KEGG: ote:Oter_4259 ribokinase-like domain-containing protein
YP_002507462.1	TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; KEGG: amt:Amet_1261 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase
YP_002507463.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: cbe:Cbei_4085 GntR family transcriptional regulator
YP_002507464.1	KEGG: lwe:lwe0436 hypothetical protein
YP_002507465.1	KEGG: sus:acid_4088 OmpA/MotB domain-containing protein
YP_002507466.1	PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: mem:Memar_1274 peptidase S8 and S53, subtilisin, kexin, sedolisin
YP_002507467.1	KEGG: sus:acid_4088 OmpA/MotB domain-containing protein
YP_002507468.1	PFAM: iron-containing alcohol dehydrogenase; aldehyde dehydrogenase; KEGG: cdf:CD2966 bifunctional acetaldehyde-CoA/alcohol dehydrogenase
YP_002507469.1	PFAM: methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; KEGG: csc:Csac_0423 cobalamin B12-binding domain-containing protein
YP_002507470.1	KEGG: ote:Oter_3656 hypothetical protein
YP_002507471.1	PFAM: ferredoxin; KEGG: tte:TTE1028 hypothetical protein
YP_002507472.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: csc:Csac_1050 ABC transporter
YP_002507473.1	PFAM: transporter permease; ABC-3 protein; KEGG: fnu:FN1969 hemin transporter permease HmuU
YP_002507474.1	PFAM: periplasmic binding protein; KEGG: csc:Csac_1048 periplasmic binding protein
YP_002507475.1	TIGRFAM: phosphopentomutase; PFAM: metalloenzyme domain protein; phosphopentomutase domain protein; KEGG: tte:TTE0463 phosphopentomutase
YP_002507476.1	KEGG: nth:Nther_0726 CapA domain protein
YP_002507477.1	PFAM: sulfatase; KEGG: cbb:CLD_1681 sulfatase family protein
YP_002507478.1	KEGG: efa:EF2212 hypothetical protein
YP_002507479.1	PFAM: hypothetical protein; Tetratricopeptide TPR_2 repeat protein; SMART: hypothetical protein; KEGG: cth:Cthe_1030 hypothetical protein
YP_002507480.1	PFAM: lipolytic protein G-D-S-L family; KEGG: lin:lin0634 hypothetical protein
YP_002507481.1	PFAM: Domain of unknown function DUF1836; KEGG: spd:SPD_1294 hypothetical protein
YP_002507482.1	PFAM: protein of unknown function DUF204; KEGG: cac:CAC0130 hypothetical protein
YP_002507483.1	TIGRFAM: anthranilate synthase component I; PFAM: anthranilate synthase component I domain protein; chorismate binding-like; KEGG: msi:Msm_1146 anthranilate/para-aminobenzoate synthase component I, TrpE
YP_002507484.1	TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: rsd:TGRD_117 anthranilate synthase glutamine amidotransferase component
YP_002507485.1	Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate
YP_002507486.1	involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water
YP_002507487.1	PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: rsd:TGRD_120 phosphoribosylanthranilate isomerase
YP_002507488.1	catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate
YP_002507489.1	TIGRFAM: tryptophan synthase, subunit alpha; PFAM: tryptophan synthase alpha chain; KEGG: msi:Msm_1141 tryptophan synthase, alpha subunit, TrpA
YP_002507490.1	PFAM: aldo/keto reductase; KEGG: cac:CAC3378 aldo/keto reductase
YP_002507491.1	PFAM: hexokinase; KEGG: hmo:HM1_0763 hexokinase
YP_002507492.1	KEGG: tte:TTE1902 hypothetical protein
YP_002507493.1	PFAM: cell wall hydrolase/autolysin; KEGG: esi:Exig_1130 cell wall hydrolase/autolysin
YP_002507494.1	PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: csa:Csal_0359 alcohol dehydrogenase GroES-like protein
YP_002507495.1	TIGRFAM: ribokinase; PFAM: PfkB domain protein; KEGG: pae:PA1950 ribokinase
YP_002507496.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: cth:Cthe_1488 methyl-accepting chemotaxis sensory transducer
YP_002507497.1	PFAM: RelA/SpoT domain protein; KEGG: cbe:Cbei_2333 RelA/SpoT domain protein
YP_002507498.1	KEGG: efa:EF1536 hypothetical protein
YP_002507499.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cbe:Cbei_3089 ABC transporter
YP_002507500.1	PFAM: uracil-DNA glycosylase; KEGG: dsy:DSY3733 hypothetical protein
YP_002507501.1	PFAM: BioY protein; KEGG: cbe:Cbei_1913 BioY protein
YP_002507503.1	PFAM: isoprenylcysteine carboxyl methyltransferase; KEGG: ckl:CKL_0584 hypothetical protein
YP_002507504.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: nth:Nther_2579 methyl-accepting chemotaxis sensory transducer with cache sensor
YP_002507505.1	KEGG: dsy:DSY4338 hypothetical protein
YP_002507507.1	TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: cth:Cthe_0186 UDP-galactose 4-epimerase
YP_002507508.1	TIGRFAM: galactokinase; PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: csc:Csac_1511 galactokinase
YP_002507509.1	PFAM: ricin B lectin; S-layer domain protein; carbohydrate binding family 6; protein of unknown function DUF291; glycoside hydrolase family 43; KEGG: hmo:HM1_0142 hypothetical protein
YP_002507510.1	KEGG: psa:PST_0303 hypothetical protein
YP_002507511.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; beta-phosphoglucomutase; beta-phosphoglucomutase family hydrolase; PFAM: haloacid dehalogenase; KEGG: pmo:Pmob_0141 beta-phosphoglucomutase
YP_002507512.1	PFAM: glycoside hydrolase family 65 central catalytic; glycoside hydrolase family 65 domain protein; KEGG: tex:Teth514_2202 kojibiose phosphorylase
YP_002507513.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: oih:OB0776 sugar ABC transporter permease
YP_002507514.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: tle:Tlet_1426 binding-protein-dependent transport systems inner membrane component
YP_002507515.1	PFAM: extracellular solute-binding protein family 1; KEGG: tpd:Teth39_1520 extracellular solute-binding protein
YP_002507516.1	PFAM: S-layer domain protein; Ig family protein; sugar-binding domain protein; KEGG: swo:Swol_0298 hypothetical protein
YP_002507517.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase internal region; KEGG: csc:Csac_0125 histidine kinase internal region
YP_002507518.1	PFAM: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: csc:Csac_0684 response regulator receiver protein
YP_002507519.1	PFAM: aldo/keto reductase; KEGG: amt:Amet_0907 aldo/keto reductase
YP_002507520.1	KEGG: fth:FTH_0345 hypothetical protein
YP_002507521.1	PFAM: AMP-dependent synthetase and ligase; KEGG: hmo:HM1_0197 long-chain-fatty-acid-CoA ligase
YP_002507522.1	KEGG: acyl carrier protein, mitochondrial precursor,   ; K03955 NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1
YP_002507524.1	PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: gme:Gmet_2019 Orn/DAP/Arg decarboxylase 2
YP_002507525.1	PFAM: phosphopantetheine-binding; KEGG: sat:SYN_01151 acyl carrier protein
YP_002507526.1	KEGG: saq:Sare_0485 hypothetical protein
YP_002507527.1	KEGG: dde:Dde_1603 hypothetical protein
YP_002507528.1	PFAM: aminotransferase class-III; KEGG: bca:BCE_4189 adenosylmethionine--8-amino-7-oxononanoate transaminase
YP_002507529.1	PFAM: protein of unknown function DUF98; KEGG: btl:BALH_2115 hypothetical protein
YP_002507530.1	PFAM: ABC transporter; KEGG: cdf:CD1603 ABC transporter permease
YP_002507531.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cdf:CD1604 ABC transporter ATP-binding protein
YP_002507532.1	PFAM: transcription activator effector binding; KEGG: cdf:CD1605 hypothetical protein
YP_002507533.1	PFAM: helix-turn-helix- domain containing protein AraC type; transcription activator effector binding; KEGG: cdf:CD1883 AraC family transcription regulator
YP_002507534.1	TIGRFAM: excinuclease ABC subunit A; PFAM: ABC transporter related; KEGG: cau:Caur_1688 excinuclease ABC subunit A
YP_002507535.1	PFAM: transposase IS200-family protein; KEGG: dsy:DSY1392 hypothetical protein
YP_002507541.1	KEGG: dsy:DSY4643 hypothetical protein
YP_002507544.1	KEGG: mbb:BCG_3414c hypothetical protein
YP_002507545.1	KEGG: mag:amb4272 hypothetical protein
YP_002507546.1	KEGG: ctc:CTC01541 phage pre-neck appendage-like protein
YP_002507549.1	KEGG: cpf:CPF_0969 KID repeat-containing protein
YP_002507550.1	KEGG: ljo:LJ0323 Lj965 prophage protein
YP_002507551.1	KEGG: dsy:DSY2176 hypothetical protein
YP_002507552.1	KEGG: cpf:CPF_0964 hypothetical protein
YP_002507554.1	KEGG: cpf:CPF_0962 hypothetical protein
YP_002507555.1	KEGG: cpf:CPF_0961 hypothetical protein
YP_002507556.1	KEGG: cpf:CPF_0960 hypothetical protein
YP_002507557.1	KEGG: cpf:CPF_0959 hypothetical protein
YP_002507558.1	KEGG: cpf:CPF_0958 hypothetical protein
YP_002507559.1	KEGG: cpf:CPF_0957 hypothetical protein
YP_002507560.1	KEGG: cpf:CPF_0956  phage major capsid protein
YP_002507561.1	PFAM: minor structural GP20 protein; KEGG: cno:NT01CX_2174 scaffold protein
YP_002507564.1	KEGG: cpf:CPF_0952  phage minor capsid protein
YP_002507565.1	KEGG: cpf:CPF_0951  phage minor capsid protein
YP_002507566.1	KEGG: cpf:CPF_0949  phage terminase, large subunit
YP_002507567.1	PFAM: terminase small subunit; KEGG: bpt:Bpet0975 hypothetical protein
YP_002507570.1	KEGG: cbl:CLK_A0265 phage protein
YP_002507571.1	PFAM: endodeoxyribonuclease RusA; KEGG: spj:MGAS2096_Spy0569 phage protein
YP_002507573.1	PFAM: primase; KEGG: spj:MGAS2096_Spy0567 ATPase
YP_002507574.1	KEGG: bce:BC1869 phage protein
YP_002507575.1	TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: sha:SH2634 hypothetical protein
YP_002507576.1	PFAM: helicase; type III restriction protein res subunit; DEAD/DEAH box helicase; SMART: DEAD-like helicases; KEGG: spj:MGAS2096_Spy0565 DNA/RNA helicase
YP_002507577.1	KEGG: spj:MGAS2096_Spy0564 phage protein
YP_002507578.1	KEGG: spj:MGAS2096_Spy0561 phage protein
YP_002507579.1	PFAM: SMC domain protein; KEGG: spj:MGAS2096_Spy0560 chromosome segregation ATPases
YP_002507581.1	TIGRFAM: AbrB family transcriptional regulator; PFAM: SpoVT/AbrB domain protein; KEGG: cth:Cthe_2100 AbrB family transcriptional regulator
YP_002507584.1	KEGG: bat:BAS0421 prophage LambdaBa04, DNA binding protein
YP_002507585.1	PFAM: hypothetical protein; KEGG: ckl:CKL_1947 hypothetical protein
YP_002507586.1	PFAM: hypothetical protein; peptidase S24 and S26 domain protein; KEGG: bce:BC3704 LexA repressor
YP_002507587.1	PFAM: integrase family protein; KEGG: bce:BC2556 DNA integration/recombination/invertion protein
YP_002507588.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
YP_002507589.1	TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: cth:Cthe_2060 RNA methyltransferase
YP_002507590.1	PFAM: ribonuclease III; KEGG: cth:Cthe_2061 hypothetical protein
YP_002507591.1	TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: endonuclease/exonuclease/phosphatase; KEGG: cth:Cthe_0458 exodeoxyribonuclease III Xth
YP_002507592.1	PFAM: NLP/P60 protein; SH3 type 3 domain protein; KEGG: cpy:Cphy_1440 peptidoglycan binding domain-containing protein
YP_002507593.1	TIGRFAM: cysteinyl-tRNA synthetase; PFAM: tRNA synthetase class I (M); Cysteinyl-tRNA synthetase class Ia; KEGG: dth:DICTH_1585 cysteinyl-tRNA synthetase
YP_002507594.1	TIGRFAM: serine O-acetyltransferase; KEGG: cth:Cthe_2066 serine O-acetyltransferase
YP_002507595.1	KEGG: cac:CAC2342 hypothetical protein
YP_002507596.1	KEGG: amt:Amet_2448 hypothetical protein
YP_002507597.1	KEGG: cac:CAC2352 hypothetical protein
YP_002507598.1	PFAM: helix-hairpin-helix motif; 8-oxoguanine DNA glycosylase domain protein; SMART: HhH-GPD family protein; KEGG: cth:Cthe_2068 8-oxoguanine DNA glycosylase-like protein
YP_002507599.1	KEGG: cth:Cthe_2069 hypothetical protein
YP_002507600.1	catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis
YP_002507601.1	TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: cth:Cthe_1842 O-acetylhomoserine/O-acetylserine sulfhydrylase
YP_002507602.1	PFAM: binding-protein-dependent transporters inner membrane component; substrate-binding region of ABC-type glycine betaine transporter; KEGG: cbt:CLH_2668 glycine betaine/carnitine/choline transporter permease opucb
YP_002507603.1	KEGG: cbt:CLH_2669 glycine betaine/L-proline ABC transporter ATP-binding protein; TIGRFAM: glycine betaine/L-proline ABC transporter ATPase; PFAM: CBS domain containing protein; ABC transporter related; SMART: ATPase AAA
YP_002507604.1	PFAM: regulatory protein GntR HTH; TrkA-C domain protein; KEGG: cbt:CLH_2670 GntR family transcriptional regulator
YP_002507605.1	KEGG: cth:Cthe_2383 hypothetical protein
YP_002507606.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: amu:Amuc_1566 iron-containing alcohol dehydrogenase
YP_002507607.1	PFAM: regulatory protein MerR; KEGG: cbe:Cbei_0557  MerR family transcriptional regulator
YP_002507608.1	KEGG: cth:Cthe_2070 hypothetical protein
YP_002507609.1	TIGRFAM: sporulation protein YtxC; PFAM: sporulation protein YtxC; KEGG: cth:Cthe_2071 hypothetical protein
YP_002507610.1	KEGG: cth:Cthe_2072 hypothetical protein
YP_002507611.1	PFAM: protein of unknown function DUF378; KEGG: cth:Cthe_2074 hypothetical protein
YP_002507612.1	PFAM: small acid-soluble spore protein alpha/beta type; KEGG: cth:Cthe_3176 small acid-soluble spore protein, alpha/beta type
YP_002507613.1	PFAM: protein of unknown function UPF0118; KEGG: bwe:BcerKBAB4_1797 hypothetical protein
YP_002507614.1	KEGG: trq:TRQ2_0769 hypothetical protein
YP_002507615.1	KEGG: cth:Cthe_2247 regulatory protein, MerR
YP_002507617.1	PFAM: phosphoesterase PA-phosphatase related; KEGG: cbt:CLH_3231 PAP2 family protein
YP_002507618.1	KEGG: ckl:CKL_2427 hypothetical protein
YP_002507619.1	PFAM: extracellular solute-binding protein family 1; KEGG: esi:Exig_0586 extracellular solute-binding protein
YP_002507620.1	PFAM: ABC transporter transmembrane protein; ABC transporter related; SMART: ATPase AAA; KEGG: dsy:DSY1412 hypothetical protein
YP_002507621.1	PFAM: hemerythrin HHE cation binding domain protein; KEGG: cth:Cthe_1509 hypothetical protein
YP_002507622.1	KEGG: cth:Cthe_2514 hypothetical protein
YP_002507623.1	PFAM: protein of unknown function DUF951; KEGG: cth:Cthe_2512 hypothetical protein
YP_002507624.1	PFAM: MscS Mechanosensitive ion channel; KEGG: cth:Cthe_2511 MscS mechanosensitive ion channel
YP_002507625.1	PFAM: glutamine amidotransferase class-I; peptidase C26; KEGG: cth:Cthe_2162 peptidase C26
YP_002507626.1	PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: cth:Cthe_2164 rubredoxin-type Fe(Cys)4 protein
YP_002507628.1	KEGG: bay:RBAM_013480 hypothetical protein
YP_002507629.1	TIGRFAM: sporulation protein YyaC; PFAM: protein of unknown function DUF1256; KEGG: cth:Cthe_2165 hypothetical protein
YP_002507630.1	KEGG: cth:Cthe_2166  PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein
YP_002507631.1	TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: pdi:BDI_3150  methionine aminopeptidase A
YP_002507632.1	TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; KEGG: det:DET1431 hydrogenase accessory protein HypB
YP_002507633.1	PFAM: protein of unknown function UPF0126; KEGG: btl:BALH_4926 permease
YP_002507634.1	TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis HypA; KEGG: tte:TTE0129 hypothetical protein
YP_002507635.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: csc:Csac_1539 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_002507636.1	PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: csc:Csac_1538 NADH-ubiquinone oxidoreductase, chain 49kDa
YP_002507637.1	PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: csc:Csac_1537 NADH dehydrogenase (ubiquinone), 30 kDa subunit
YP_002507638.1	PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: csc:Csac_1536 NADH ubiquinone oxidoreductase, 20 kDa subunit
YP_002507639.1	PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: csc:Csac_1535 respiratory-chain NADH dehydrogenase, subunit 1
YP_002507640.1	PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: dvl:Dvul_2501 NADH dehydrogenase (quinone)
YP_002507641.1	TIGRFAM: sporulation integral membrane protein YtvI; PFAM: protein of unknown function UPF0118; KEGG: cth:Cthe_2429 hypothetical protein
YP_002507642.1	TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; KEGG: cth:Cthe_2428 HemK family modification methylase
YP_002507643.1	PFAM: protein of unknown function DUF1385; KEGG: cth:Cthe_2427 hypothetical protein
YP_002507644.1	PFAM: ribosomal protein L31; KEGG: cth:Cthe_2172 50S ribosomal protein L31P
YP_002507645.1	An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes
YP_002507646.1	PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cpy:Cphy_2411 glyoxalase/bleomycin resistance protein/dioxygenase
YP_002507648.1	KEGG: aoe:Clos_0811 hypothetical protein
YP_002507649.1	TIGRFAM: purine nucleoside phosphorylase; PFAM: purine or other phosphorylase family 1; KEGG: cpy:Cphy_0752 purine nucleoside phosphorylase
YP_002507650.1	PFAM: sulfatase; KEGG: bwe:BcerKBAB4_4608 sulfatase
YP_002507651.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: cbe:Cbei_4484 multi-sensor signal transduction histidine kinase
YP_002507652.1	PFAM: amidinotransferase; KEGG: amt:Amet_3161 arginine deiminase
YP_002507653.1	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: cbe:Cbei_2656 MATE efflux family protein
YP_002507654.1	PFAM: protein of unknown function DUF1061; KEGG: bca:BCE_3298 hypothetical protein
YP_002507655.1	SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA
YP_002507656.1	PFAM: beta-lactamase; KEGG: cth:Cthe_2327 beta-lactamase-like protein
YP_002507657.1	adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active
YP_002507658.1	KEGG: cth:Cthe_2329 hypothetical protein
YP_002507659.1	KEGG: cth:Cthe_2330 hypothetical protein
YP_002507660.1	KEGG: cth:Cthe_2331 hypothetical protein
YP_002507661.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: cth:Cthe_2332 multi-sensor signal transduction histidine kinase
YP_002507662.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cth:Cthe_2333 two component transcriptional regulator
YP_002507663.1	KEGG: cno:NT01CX_1552 hypothetical protein
YP_002507664.1	KEGG: cth:Cthe_1765 hypothetical protein
YP_002507665.1	PFAM: S-layer domain protein; KEGG: cth:Cthe_2348 Ig-related protein
YP_002507666.1	KEGG: cth:Cthe_2348 Ig-related protein
YP_002507667.1	KEGG: cth:Cthe_2348 Ig-related protein
YP_002507668.1	TIGRFAM: glucose-1-phosphate adenylyltransferase, GlgD subunit; PFAM: nucleotidyl transferase; KEGG: cth:Cthe_3167 glucose-1-phosphate adenylyltransferase, GlgD subunit
YP_002507669.1	catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate
YP_002507670.1	TIGRFAM: glutamate racemase; PFAM: Asp/Glu/hydantoin racemase; KEGG: cbe:Cbei_3599 glutamate racemase
YP_002507672.1	KEGG: chy:CHY_2613 hypothetical protein
YP_002507673.1	PFAM: PP-loop domain protein; KEGG: cth:Cthe_2181 ATPase
YP_002507674.1	KEGG: cth:Cthe_2182 Ig-like, group 2
YP_002507675.1	TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: nucleotidyl transferase; KEGG: cth:Cthe_2183 UDP-glucose pyrophosphorylase
YP_002507676.1	KEGG: cbb:CLD_3208 hypothetical protein
YP_002507677.1	KEGG: hypothetical protein
YP_002507678.1	PFAM: glycoside hydrolase; KEGG: acl:ACL_0715 glycosyl hydrolase, family 3
YP_002507679.1	PFAM: GumN family protein; KEGG: sru:SRU_0130 GumN protein
YP_002507680.1	PFAM:  carbohydrate binding; glycosyltransferase 36; glycosyltransferase 36 associated; KEGG: dth:DICTH_0484 N,N'-diacetylchitobiose phosphorylase
YP_002507681.1	PFAM: transporter permease; ABC-3 protein; KEGG: cpy:Cphy_3489 ABC transporter
YP_002507682.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cpy:Cphy_3490 ABC transporter
YP_002507683.1	TIGRFAM: transketolase; PFAM: transketolase domain protein; transketolase; KEGG: ctc:CTC01332 transketolase
YP_002507684.1	KEGG: cbt:CLH_3078 hypothetical protein
YP_002507685.1	SMART: hypothetical protein; KEGG: gtn:GTNG_0162 DNA-binding protein
YP_002507686.1	KEGG: ckl:CKL_3399 hypothetical protein
YP_002507688.1	PFAM: protein of unknown function DUF815; KEGG: cpy:Cphy_1275 hypothetical protein
YP_002507689.1	PFAM: peptidase M14 carboxypeptidase A; KEGG: cbf:CLI_1470 zinc carboxypeptidase family protein
YP_002507691.1	KEGG: amt:Amet_1004 superfamily I DNA helicase
YP_002507692.1	PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: rci:RCIX2497 hypothetical protein
YP_002507693.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: ppd:Ppro_2951 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
YP_002507694.1	PFAM: glycoside hydrolase family 4; KEGG: cbe:Cbei_4359 glycoside hydrolase, family 4
YP_002507695.1	PFAM: nitroreductase; KEGG: cth:Cthe_3037 nitroreductase
YP_002507696.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: cpr:CPR_0474 AraC family transcriptional regulator
YP_002507697.1	TIGRFAM: xylose isomerase; PFAM: Xylose isomerase domain protein TIM barrel; KEGG: cdf:CD3064 xylose isomerase
YP_002507698.1	PFAM: ROK family protein; KEGG: csc:Csac_0695 ROK family protein
YP_002507699.1	TIGRFAM: xylulokinase; PFAM: carbohydrate kinase FGGY; KEGG: cdf:CD3065 xylulose kinase
YP_002507700.1	KEGG: cth:Cthe_2520 hypothetical protein
YP_002507701.1	TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: cth:Cthe_2519 alpha-isopropylmalate/homocitrate synthase family transferase
YP_002507702.1	TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: csc:Csac_1145 2-isopropylmalate synthase
YP_002507703.1	TIGRFAM: ketol-acid reductoisomerase; PFAM: acetohydroxy acid isomeroreductase; CoA-binding protein; acetohydroxy acid isomeroreductase catalytic domain protein; KEGG: cth:Cthe_2518 ketol-acid reductoisomerase
YP_002507704.1	TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; acetolactate synthase small subunit; KEGG: cth:Cthe_2517 acetolactate synthase, small subunit
YP_002507705.1	TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: cth:Cthe_2516 acetolactate synthase, large subunit
YP_002507706.1	PFAM: glycoside hydrolase family 43; KEGG: oih:OB2087 arabinofuranosidase
YP_002507708.1	PFAM: CMP/dCMP deaminase zinc-binding; KEGG: cth:Cthe_2502 tRNA-adenosine deaminase
YP_002507709.1	TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: gur:Gura_3210 GDP-mannose 4,6-dehydratase
YP_002507710.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: mba:Mbar_A0035 GDP-fucose synthetase
YP_002507711.1	PFAM: DivIVA family protein; KEGG: cth:Cthe_0788 hypothetical protein
YP_002507712.1	KEGG: gbm:Gbem_3741 hypothetical protein
YP_002507713.1	KEGG: gbm:Gbem_3741 hypothetical protein
YP_002507714.1	KEGG: gbm:Gbem_3741 hypothetical protein
YP_002507715.1	PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: cbf:CLI_3230 S8/S53 family peptidase
YP_002507716.1	PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: pfu:PF1357 UDP-or dTTP-glucose 4-epimerase or 4-6-dehydratase
YP_002507717.1	PFAM: transketolase; transketolase domain protein; KEGG: rpb:RPB_3807 acetoin dehydrogenase (TPP-dependent) beta chain
YP_002507718.1	PFAM: dehydrogenase E1 component; KEGG: tpd:Teth39_0790 pyruvate dehydrogenase (acetyl-transferring)
YP_002507719.1	KEGG: gbm:Gbem_3741 hypothetical protein
YP_002507720.1	PFAM: nucleotidyl transferase; KEGG: csc:Csac_2018 mannose-1-phosphate guanylyltransferase (GDP)
YP_002507721.1	KEGG: gtn:GTNG_3084 hypothetical protein
YP_002507722.1	leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase
YP_002507723.1	PFAM: Accessory gene regulator B; KEGG: ckl:CKL_3367 AgrB-like protein
YP_002507725.1	PFAM: ATP-binding region ATPase domain protein; KEGG: ckl:CKL_3318 two-component sensor histidine kinase
YP_002507726.1	PFAM: SNF2-related protein; helicase; zinc finger SWIM domain protein; SNF2 helicase associated domain protein; SMART: DEAD-like helicases; KEGG: aoe:Clos_1039 non-specific serine/threonine protein kinase
YP_002507727.1	KEGG: drm:Dred_3214  aminopeptidase
YP_002507728.1	TIGRFAM: oligoendopeptidase F; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; oligopeptidase F; KEGG: cth:Cthe_2452 oligopeptidase F
YP_002507729.1	KEGG: fta:FTA_1106 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
YP_002507731.1	PFAM: hypothetical protein; carbohydrate-binding family 9; KEGG: cth:Cthe_0912 glycoside hydrolase family protein
YP_002507732.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: cac:CAC3553 LacI family transcription regulator
YP_002507734.1	PFAM: protein of unknown function UPF0180; KEGG: cth:Cthe_0096 hypothetical protein
YP_002507735.1	TIGRFAM: L-ribulose-5-phosphate 4-epimerase; PFAM: class II aldolase/adducin family protein; KEGG: cbt:CLH_3015 L-ribulose-5-phosphate 4-epimerase
YP_002507736.1	PFAM: carbohydrate kinase FGGY; KEGG: cbe:Cbei_4452 carbohydrate kinase, FGGY
YP_002507737.1	KEGG: csc:Csac_0877 L-fucose isomerase-like protein
YP_002507738.1	PFAM: regulatory protein GntR HTH; periplasmic binding protein/LacI transcriptional regulator; KEGG: bld:BLi03256 hypothetical protein
YP_002507740.1	PFAM: protein of unknown function UPF0047; KEGG: cac:CAC0907 hypothetical protein
YP_002507741.1	Regulatory factor involved in maltose metabolism
YP_002507742.1	TIGRFAM: desulfoferrodoxin; PFAM: Desulfoferrodoxin ferrous iron-binding region; Desulfoferrodoxin Dfx domain protein; KEGG: dps:DP1668 desulfoferrodoxin
YP_002507743.1	KEGG: cth:Cthe_2436 hypothetical protein
YP_002507744.1	similar to YegS from E. coli
YP_002507745.1	KEGG: cth:Cthe_2349 small, acid-soluble spore proteins, alpha/be
YP_002507746.1	TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; KEGG: cth:Cthe_2354 nicotinate-nucleotide pyrophosphorylase [carboxylating]
YP_002507747.1	TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: cth:Cthe_2355 L-aspartate oxidase
YP_002507748.1	TIGRFAM: quinolinate synthetase complex, subunit alpha; PFAM: Quinolinate synthetase A; KEGG: cth:Cthe_2356 quinolinate synthetase A
YP_002507749.1	TIGRFAM: DNA gyrase subunit alpha; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; KEGG: cth:Cthe_2361 DNA gyrase subunit A
YP_002507750.1	TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: cth:Cthe_2362 ParB family protein
YP_002507751.1	TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; KEGG: cth:Cthe_2363 methyltransferase GidB
YP_002507752.1	GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs
YP_002507753.1	TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Miro domain protein; KEGG: cth:Cthe_2365 tRNA modification GTPase TrmE
YP_002507754.1	PFAM: single-stranded nucleic acid binding R3H domain protein; KEGG: cth:Cthe_2366 single-stranded nucleic acid binding R3H
YP_002507755.1	PFAM: hypothetical protein; KEGG: ckl:CKL_3476 hypothetical protein
YP_002507756.1	PFAM: protein of unknown function DUF37; KEGG: cth:Cthe_2368 hypothetical protein
YP_002507757.1	protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates
YP_002507758.1	in Escherichia coli transcription of this gene is enhanced by polyamines