-- dump date 20240506_034951 -- class Genbank::Contig -- table contig_comment -- id comment NZ_CP039247.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP039247.1.REFSEQ INFORMATION: The reference sequence is identical to CP039247.1. Annotated using prokka v1.11 from http://www.vicbioinformatics.com.REFSEQ INFORMATION: The reference sequence is identical to CP039247.1. Annotated using prokka v1.11 from http://www.vicbioinformatics.com. Bacteria and source DNA available from Busse Lab, Institute forREFSEQ INFORMATION: The reference sequence is identical to CP039247.1. Annotated using prokka v1.11 from http://www.vicbioinformatics.com. Bacteria and source DNA available from Busse Lab, Institute for Microbiology, Department of Pathobiology, Veterinary MedicineREFSEQ INFORMATION: The reference sequence is identical to CP039247.1. Annotated using prokka v1.11 from http://www.vicbioinformatics.com. Bacteria and source DNA available from Busse Lab, Institute for Microbiology, Department of Pathobiology, Veterinary Medicine University of Vienna.REFSEQ INFORMATION: The reference sequence is identical to CP039247.1. Annotated using prokka v1.11 from http://www.vicbioinformatics.com. Bacteria and source DNA available from Busse Lab, Institute for Microbiology, Department of Pathobiology, Veterinary Medicine University of Vienna. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP039247.1. Annotated using prokka v1.11 from http://www.vicbioinformatics.com. Bacteria and source DNA available from Busse Lab, Institute for Microbiology, Department of Pathobiology, Veterinary Medicine University of Vienna. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP039247.1. Annotated using prokka v1.11 from http://www.vicbioinformatics.com. Bacteria and source DNA available from Busse Lab, Institute for Microbiology, Department of Pathobiology, Veterinary Medicine University of Vienna. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP039247.1. Annotated using prokka v1.11 from http://www.vicbioinformatics.com. Bacteria and source DNA available from Busse Lab, Institute for Microbiology, Department of Pathobiology, Veterinary Medicine University of Vienna. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP039247.1. Annotated using prokka v1.11 from http://www.vicbioinformatics.com. Bacteria and source DNA available from Busse Lab, Institute for Microbiology, Department of Pathobiology, Veterinary Medicine University of Vienna. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.6REFSEQ INFORMATION: The reference sequence is identical to CP039247.1. Annotated using prokka v1.11 from http://www.vicbioinformatics.com. Bacteria and source DNA available from Busse Lab, Institute for Microbiology, Department of Pathobiology, Veterinary Medicine University of Vienna. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.6 Genome Representation :: FullREFSEQ INFORMATION: The reference sequence is identical to CP039247.1. Annotated using prokka v1.11 from http://www.vicbioinformatics.com. Bacteria and source DNA available from Busse Lab, Institute for Microbiology, Department of Pathobiology, Veterinary Medicine University of Vienna. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.6 Genome Representation :: Full Expected Final Version :: YesREFSEQ INFORMATION: The reference sequence is identical to CP039247.1. Annotated using prokka v1.11 from http://www.vicbioinformatics.com. Bacteria and source DNA available from Busse Lab, Institute for Microbiology, Department of Pathobiology, Veterinary Medicine University of Vienna. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.6 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 124.1xREFSEQ INFORMATION: The reference sequence is identical to CP039247.1. Annotated using prokka v1.11 from http://www.vicbioinformatics.com. Bacteria and source DNA available from Busse Lab, Institute for Microbiology, Department of Pathobiology, Veterinary Medicine University of Vienna. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.6 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 124.1x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniIONREFSEQ INFORMATION: The reference sequence is identical to CP039247.1. Annotated using prokka v1.11 from http://www.vicbioinformatics.com. Bacteria and source DNA available from Busse Lab, Institute for Microbiology, Department of Pathobiology, Veterinary Medicine University of Vienna. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.6 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 124.1x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP039247.1. Annotated using prokka v1.11 from http://www.vicbioinformatics.com. Bacteria and source DNA available from Busse Lab, Institute for Microbiology, Department of Pathobiology, Veterinary Medicine University of Vienna. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.6 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 124.1x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP039247.1. Annotated using prokka v1.11 from http://www.vicbioinformatics.com. Bacteria and source DNA available from Busse Lab, Institute for Microbiology, Department of Pathobiology, Veterinary Medicine University of Vienna. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.6 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 124.1x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP039247.1. Annotated using prokka v1.11 from http://www.vicbioinformatics.com. Bacteria and source DNA available from Busse Lab, Institute for Microbiology, Department of Pathobiology, Veterinary Medicine University of Vienna. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.6 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 124.1x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/05/2023 02:34:28REFSEQ INFORMATION: The reference sequence is identical to CP039247.1. Annotated using prokka v1.11 from http://www.vicbioinformatics.com. Bacteria and source DNA available from Busse Lab, Institute for Microbiology, Department of Pathobiology, Veterinary Medicine University of Vienna. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.6 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 124.1x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/05/2023 02:34:28 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP039247.1. Annotated using prokka v1.11 from http://www.vicbioinformatics.com. Bacteria and source DNA available from Busse Lab, Institute for Microbiology, Department of Pathobiology, Veterinary Medicine University of Vienna. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.6 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 124.1x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/05/2023 02:34:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP039247.1. Annotated using prokka v1.11 from http://www.vicbioinformatics.com. Bacteria and source DNA available from Busse Lab, Institute for Microbiology, Department of Pathobiology, Veterinary Medicine University of Vienna. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.6 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 124.1x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/05/2023 02:34:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP039247.1. Annotated using prokka v1.11 from http://www.vicbioinformatics.com. Bacteria and source DNA available from Busse Lab, Institute for Microbiology, Department of Pathobiology, Veterinary Medicine University of Vienna. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.6 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 124.1x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/05/2023 02:34:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP039247.1. Annotated using prokka v1.11 from http://www.vicbioinformatics.com. Bacteria and source DNA available from Busse Lab, Institute for Microbiology, Department of Pathobiology, Veterinary Medicine University of Vienna. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.6 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 124.1x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/05/2023 02:34:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5REFSEQ INFORMATION: The reference sequence is identical to CP039247.1. Annotated using prokka v1.11 from http://www.vicbioinformatics.com. Bacteria and source DNA available from Busse Lab, Institute for Microbiology, Department of Pathobiology, Veterinary Medicine University of Vienna. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.6 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 124.1x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/05/2023 02:34:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP039247.1. Annotated using prokka v1.11 from http://www.vicbioinformatics.com. Bacteria and source DNA available from Busse Lab, Institute for Microbiology, Department of Pathobiology, Veterinary Medicine University of Vienna. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.6 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 124.1x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/05/2023 02:34:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,222REFSEQ INFORMATION: The reference sequence is identical to CP039247.1. Annotated using prokka v1.11 from http://www.vicbioinformatics.com. Bacteria and source DNA available from Busse Lab, Institute for Microbiology, Department of Pathobiology, Veterinary Medicine University of Vienna. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.6 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 124.1x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/05/2023 02:34:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,222 CDSs (total) :: 2,158REFSEQ INFORMATION: The reference sequence is identical to CP039247.1. Annotated using prokka v1.11 from http://www.vicbioinformatics.com. Bacteria and source DNA available from Busse Lab, Institute for Microbiology, Department of Pathobiology, Veterinary Medicine University of Vienna. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.6 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 124.1x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/05/2023 02:34:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,222 CDSs (total) :: 2,158 Genes (coding) :: 2,126REFSEQ INFORMATION: The reference sequence is identical to CP039247.1. Annotated using prokka v1.11 from http://www.vicbioinformatics.com. Bacteria and source DNA available from Busse Lab, Institute for Microbiology, Department of Pathobiology, Veterinary Medicine University of Vienna. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.6 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 124.1x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/05/2023 02:34:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,222 CDSs (total) :: 2,158 Genes (coding) :: 2,126 CDSs (with protein) :: 2,126REFSEQ INFORMATION: The reference sequence is identical to CP039247.1. Annotated using prokka v1.11 from http://www.vicbioinformatics.com. Bacteria and source DNA available from Busse Lab, Institute for Microbiology, Department of Pathobiology, Veterinary Medicine University of Vienna. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.6 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 124.1x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/05/2023 02:34:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,222 CDSs (total) :: 2,158 Genes (coding) :: 2,126 CDSs (with protein) :: 2,126 Genes (RNA) :: 64REFSEQ INFORMATION: The reference sequence is identical to CP039247.1. Annotated using prokka v1.11 from http://www.vicbioinformatics.com. Bacteria and source DNA available from Busse Lab, Institute for Microbiology, Department of Pathobiology, Veterinary Medicine University of Vienna. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.6 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 124.1x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/05/2023 02:34:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,222 CDSs (total) :: 2,158 Genes (coding) :: 2,126 CDSs (with protein) :: 2,126 Genes (RNA) :: 64 rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP039247.1. Annotated using prokka v1.11 from http://www.vicbioinformatics.com. Bacteria and source DNA available from Busse Lab, Institute for Microbiology, Department of Pathobiology, Veterinary Medicine University of Vienna. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.6 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 124.1x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/05/2023 02:34:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,222 CDSs (total) :: 2,158 Genes (coding) :: 2,126 CDSs (with protein) :: 2,126 Genes (RNA) :: 64 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP039247.1. Annotated using prokka v1.11 from http://www.vicbioinformatics.com. Bacteria and source DNA available from Busse Lab, Institute for Microbiology, Department of Pathobiology, Veterinary Medicine University of Vienna. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.6 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 124.1x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/05/2023 02:34:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,222 CDSs (total) :: 2,158 Genes (coding) :: 2,126 CDSs (with protein) :: 2,126 Genes (RNA) :: 64 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 49REFSEQ INFORMATION: The reference sequence is identical to CP039247.1. Annotated using prokka v1.11 from http://www.vicbioinformatics.com. Bacteria and source DNA available from Busse Lab, Institute for Microbiology, Department of Pathobiology, Veterinary Medicine University of Vienna. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.6 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 124.1x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/05/2023 02:34:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,222 CDSs (total) :: 2,158 Genes (coding) :: 2,126 CDSs (with protein) :: 2,126 Genes (RNA) :: 64 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 3REFSEQ INFORMATION: The reference sequence is identical to CP039247.1. Annotated using prokka v1.11 from http://www.vicbioinformatics.com. Bacteria and source DNA available from Busse Lab, Institute for Microbiology, Department of Pathobiology, Veterinary Medicine University of Vienna. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.6 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 124.1x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/05/2023 02:34:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,222 CDSs (total) :: 2,158 Genes (coding) :: 2,126 CDSs (with protein) :: 2,126 Genes (RNA) :: 64 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 3 Pseudo Genes (total) :: 32REFSEQ INFORMATION: The reference sequence is identical to CP039247.1. Annotated using prokka v1.11 from http://www.vicbioinformatics.com. Bacteria and source DNA available from Busse Lab, Institute for Microbiology, Department of Pathobiology, Veterinary Medicine University of Vienna. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.6 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 124.1x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/05/2023 02:34:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,222 CDSs (total) :: 2,158 Genes (coding) :: 2,126 CDSs (with protein) :: 2,126 Genes (RNA) :: 64 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 3 Pseudo Genes (total) :: 32 CDSs (without protein) :: 32REFSEQ INFORMATION: The reference sequence is identical to CP039247.1. Annotated using prokka v1.11 from http://www.vicbioinformatics.com. Bacteria and source DNA available from Busse Lab, Institute for Microbiology, Department of Pathobiology, Veterinary Medicine University of Vienna. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.6 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 124.1x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/05/2023 02:34:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,222 CDSs (total) :: 2,158 Genes (coding) :: 2,126 CDSs (with protein) :: 2,126 Genes (RNA) :: 64 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 3 Pseudo Genes (total) :: 32 CDSs (without protein) :: 32 Pseudo Genes (ambiguous residues) :: 0 of 32REFSEQ INFORMATION: The reference sequence is identical to CP039247.1. Annotated using prokka v1.11 from http://www.vicbioinformatics.com. Bacteria and source DNA available from Busse Lab, Institute for Microbiology, Department of Pathobiology, Veterinary Medicine University of Vienna. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.6 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 124.1x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/05/2023 02:34:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,222 CDSs (total) :: 2,158 Genes (coding) :: 2,126 CDSs (with protein) :: 2,126 Genes (RNA) :: 64 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 3 Pseudo Genes (total) :: 32 CDSs (without protein) :: 32 Pseudo Genes (ambiguous residues) :: 0 of 32 Pseudo Genes (frameshifted) :: 9 of 32REFSEQ INFORMATION: The reference sequence is identical to CP039247.1. Annotated using prokka v1.11 from http://www.vicbioinformatics.com. Bacteria and source DNA available from Busse Lab, Institute for Microbiology, Department of Pathobiology, Veterinary Medicine University of Vienna. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.6 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 124.1x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/05/2023 02:34:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,222 CDSs (total) :: 2,158 Genes (coding) :: 2,126 CDSs (with protein) :: 2,126 Genes (RNA) :: 64 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 3 Pseudo Genes (total) :: 32 CDSs (without protein) :: 32 Pseudo Genes (ambiguous residues) :: 0 of 32 Pseudo Genes (frameshifted) :: 9 of 32 Pseudo Genes (incomplete) :: 22 of 32REFSEQ INFORMATION: The reference sequence is identical to CP039247.1. Annotated using prokka v1.11 from http://www.vicbioinformatics.com. Bacteria and source DNA available from Busse Lab, Institute for Microbiology, Department of Pathobiology, Veterinary Medicine University of Vienna. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.6 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 124.1x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/05/2023 02:34:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,222 CDSs (total) :: 2,158 Genes (coding) :: 2,126 CDSs (with protein) :: 2,126 Genes (RNA) :: 64 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 3 Pseudo Genes (total) :: 32 CDSs (without protein) :: 32 Pseudo Genes (ambiguous residues) :: 0 of 32 Pseudo Genes (frameshifted) :: 9 of 32 Pseudo Genes (incomplete) :: 22 of 32 Pseudo Genes (internal stop) :: 6 of 32REFSEQ INFORMATION: The reference sequence is identical to CP039247.1. Annotated using prokka v1.11 from http://www.vicbioinformatics.com. Bacteria and source DNA available from Busse Lab, Institute for Microbiology, Department of Pathobiology, Veterinary Medicine University of Vienna. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.6 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 124.1x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/05/2023 02:34:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,222 CDSs (total) :: 2,158 Genes (coding) :: 2,126 CDSs (with protein) :: 2,126 Genes (RNA) :: 64 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 3 Pseudo Genes (total) :: 32 CDSs (without protein) :: 32 Pseudo Genes (ambiguous residues) :: 0 of 32 Pseudo Genes (frameshifted) :: 9 of 32 Pseudo Genes (incomplete) :: 22 of 32 Pseudo Genes (internal stop) :: 6 of 32 Pseudo Genes (multiple problems) :: 5 of 32REFSEQ INFORMATION: The reference sequence is identical to CP039247.1. Annotated using prokka v1.11 from http://www.vicbioinformatics.com. Bacteria and source DNA available from Busse Lab, Institute for Microbiology, Department of Pathobiology, Veterinary Medicine University of Vienna. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.6 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 124.1x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/05/2023 02:34:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,222 CDSs (total) :: 2,158 Genes (coding) :: 2,126 CDSs (with protein) :: 2,126 Genes (RNA) :: 64 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 3 Pseudo Genes (total) :: 32 CDSs (without protein) :: 32 Pseudo Genes (ambiguous residues) :: 0 of 32 Pseudo Genes (frameshifted) :: 9 of 32 Pseudo Genes (incomplete) :: 22 of 32 Pseudo Genes (internal stop) :: 6 of 32 Pseudo Genes (multiple problems) :: 5 of 32 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP039247.1. Annotated using prokka v1.11 from http://www.vicbioinformatics.com. Bacteria and source DNA available from Busse Lab, Institute for Microbiology, Department of Pathobiology, Veterinary Medicine University of Vienna. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.6 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 124.1x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/05/2023 02:34:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,222 CDSs (total) :: 2,158 Genes (coding) :: 2,126 CDSs (with protein) :: 2,126 Genes (RNA) :: 64 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 3 Pseudo Genes (total) :: 32 CDSs (without protein) :: 32 Pseudo Genes (ambiguous residues) :: 0 of 32 Pseudo Genes (frameshifted) :: 9 of 32 Pseudo Genes (incomplete) :: 22 of 32 Pseudo Genes (internal stop) :: 6 of 32 Pseudo Genes (multiple problems) :: 5 of 32 ##Genome-Annotation-Data-END## COMPLETENESS: full length.