-- dump date   	20140619_052917
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_006493607.1	helix-turn-helix domain-containing protein
YP_006493609.1	HIRAN domain-containing protein. The HIRAN domain is found as a standalone protein in several bacteria and prophages.
YP_006493611.1	helix-turn-helix XRE-family protein
YP_006493612.1	helix-turn-helix domain-containing protein
YP_006493616.1	Similar to Corynebacterium diphtheriae NCTC13129 prophage putative anti-repressor protein DIP0190 (272 aa) blastp scores: E(): 2e-35, 43% id in 187 aa.
YP_006493617.1	Similar to Corynebacterium diphtheriae NCTC13129 prophage hypothetical protein DIP0191 (80 aa) blastp scores: E(): 5e-06, 34% id in 64 aa.
YP_006493618.1	Similar to Corynebacterium diphtheriae NCTC13129 prophage hypothetical protein DIP0195 (49 aa) blastp scores: E(): 6e-04, 49% id in 49 aa.
YP_006493619.1	Similar to Corynebacterium diphtheriae NCTC13129 prophage hypothetical protein DIP0196 (147 aa) blastp scores: E(): 2e-20, 43% id in 145 aa.
YP_006493620.1	Similar to Corynebacterium diphtheriae NCTC13129 prophage hypothetical protein DIP0197A (102 aa) blastp scores: E(): 4e-16, 44% id in 103 aa.
YP_006493621.1	Similar to Corynebacterium diphtheriae NCTC13129 prophage hypothetical protein DIP0198 (402 aa) blastp scores: E(): 2e-126, 67% id in 383 aa.
YP_006493622.1	Similar to Corynebacterium diphtheriae NCTC13129 prophage hypothetical protein DIP0199 (204 aa) blastp scores: E(): 5e-31, 47% id in 187 aa.
YP_006493624.1	Similar to Streptomyces phage phiSASD1 gp21 (125 aa) blastp scores: E(): 2e-11, 37% id in 126 aa.
YP_006493625.1	Similar to Streptomyces phage phiSASD1 gp22 terminase large subunit (536 aa) blastp scores: E(): 2e-79, 49% id in 325 aa.
YP_006493626.1	Similar to Streptomyces phage phiSASD1 gp22 terminase large subunit (536 aa) blastp scores: E(): 4e-44, 48% id in 175 aa.
YP_006493627.1	Similar to Mycobacterium phage Bxz2 gp14 (484 aa) blastp scores: E(): 2e-53, 32% id in 445 aa.
YP_006493628.1	Similar to Streptomyces phage phiSASD1 gp24 (214 aa) blastp scores: E(): 2e-07, 33% id in 118 aa, and Streptomyces phage phiSASD1 gp25 (89 aa) blastp scores: E(): 2e-04, 37% id in 110 aa. Note: It seems these two bacterophage proteins have been fused in this gene.
YP_006493630.1	Similar to Streptococcus phage 23782 phage protein (156 aa) blastp scores: E(): 0.006, 32% id in 147 aa.
YP_006493631.1	Similar to Synechococcus phage S-CBS2 major capsid protein (300 aa) blastp scores: E(): 3e-04, 25% id in 279 aa.
YP_006493635.1	DUF646 family protein. This family of proteins is found in the caudovirales and prophage. It may be a head/tail component or be involved in tail assembly.
YP_006493637.1	Similar to Corynebacterium diphtheriae NCTC13129 prophage hypothetical protein DIP0210 (315 aa) blastp scores: E(): 3e-22, 62% id in 84 aa.
YP_006493640.1	Similar to Corynebacterium diphtheriae NCTC13129 prophage immunity-specific protein Beta241 (1880 aa) blastp scores: E(): 2e-36, 31% id in 514 aa.
YP_006493641.1	Similar to Corynebacterium diphtheriae NCTC13129 prophage immunity-specific protein Beta201 (250 aa) blastp scores: E(): 1e-16, 27% id in 253 aa.
YP_006493642.1	Similar to Corynebacterium diphtheriae NCTC13129 prophage immunity-specific protein Beta286 (286 aa) blastp scores: E(): 2e-50, 39% id in 290 aa.
YP_006493643.1	Similar to Corynebacterium diphtheriae NCTC13129 prophage immunity-specific protein Beta371 (371 aa) blastp scores: E(): 9e-60, 39% id in 370 aa.
YP_006493644.1	Similar to Corynebacterium diphtheriae NCTC13129 prophage putative phage tail fiber protein (475 aa) blastp scores: E(): 1e-21, 44% id in 137 aa.
YP_006493645.1	putateive peptidoglycan recognition protein (PGRP)
YP_006493646.1	Holin, bacteriophage r1t-like protein. Holin is a phage membrane protein that is necessary for host cell lysis.
YP_006493647.1	Similar to Corynebacterium diphtheriae NCTC13129 prophage hypothetical protein DIP0220 (154 aa) blastp scores: E(): 3e-64, 80% id in 151 aa.
YP_006493648.1	Similar to Corynebacterium diphtheriae NCTC13129 prophage hypothetical protein DIP0221 (112 aa) blastp scores: E(): 3e-48, 85% id in 112 aa.