-- dump date 20140619_060705 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_001561033.1 160895451 5751690 16..1422 1 NC_010002.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 1422 dnaA 5751690 dnaA Delftia acidovorans SPH-1 chromosomal replication initiation protein YP_001561033.1 16 D 398578 CDS YP_001561034.1 160895452 5745538 1544..2662 1 NC_010002.1 KEGG: aav:Aave_0002 DNA polymerase III, beta subunit; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain; DNA polymerase III subunit beta 2662 5745538 Daci_0002 Delftia acidovorans SPH-1 DNA polymerase III subunit beta YP_001561034.1 1544 D 398578 CDS YP_001561035.1 160895453 5745539 2865..5444 1 NC_010002.1 KEGG: ajs:Ajs_4146 DNA gyrase, B subunit; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase subunit B domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA topoisomerase type IIA subunit B region 2 domain protein; SMART: DNA topoisomerase II; DNA gyrase subunit B 5444 5745539 Daci_0003 Delftia acidovorans SPH-1 DNA gyrase subunit B YP_001561035.1 2865 D 398578 CDS YP_001561036.1 160895454 5745540 complement(5770..6699) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: vei:Veis_4576 transcriptional regulator, LysR family; LysR family transcriptional regulator 6699 5745540 Daci_0004 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001561036.1 5770 R 398578 CDS YP_001561037.1 160895455 5745541 6915..7727 1 NC_010002.1 PFAM: LamB/YcsF family protein; KEGG: vei:Veis_4577 LamB/YcsF family protein; hypothetical protein 7727 5745541 Daci_0005 Delftia acidovorans SPH-1 hypothetical protein YP_001561037.1 6915 D 398578 CDS YP_001561038.1 160895456 5745542 7781..8029 1 NC_010002.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: vei:Veis_4578 biotin/lipoyl attachment domain-containing protein; hypothetical protein 8029 5745542 Daci_0006 Delftia acidovorans SPH-1 hypothetical protein YP_001561038.1 7781 D 398578 CDS YP_001561039.1 160895457 5745543 8040..9437 1 NC_010002.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: vei:Veis_4579 carbamoyl-phosphate synthase L chain, ATP-binding; acetyl-CoA carboxylase, biotin carboxylase 9437 5745543 Daci_0007 Delftia acidovorans SPH-1 acetyl-CoA carboxylase, biotin carboxylase YP_001561039.1 8040 D 398578 CDS YP_001561040.1 160895458 5745544 9434..10345 1 NC_010002.1 PFAM: Allophanate hydrolase subunit 1; KEGG: bur:Bcep18194_A6283 allophanate hydrolase subunit 1; allophanate hydrolase subunit 1 10345 5745544 Daci_0008 Delftia acidovorans SPH-1 allophanate hydrolase subunit 1 YP_001561040.1 9434 D 398578 CDS YP_001561041.1 160895459 5745545 10335..11312 1 NC_010002.1 KEGG: vei:Veis_4581 UreA amidolyase related protein; TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; urea amidolyase-like protein 11312 5745545 Daci_0009 Delftia acidovorans SPH-1 urea amidolyase-like protein YP_001561041.1 10335 D 398578 CDS YP_001561042.1 160895460 5745546 complement(11432..12595) 1 NC_010002.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: reh:H16_A3377 predicted acyl-CoA transferase/carnitine dehydratase; L-carnitine dehydratase/bile acid-inducible protein F 12595 5745546 Daci_0010 Delftia acidovorans SPH-1 L-carnitine dehydratase/bile acid-inducible protein F YP_001561042.1 11432 R 398578 CDS YP_001561043.1 160895461 5745547 complement(12690..13610) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_A3376 transcriptional regulator, LysR-family; LysR family transcriptional regulator 13610 5745547 Daci_0011 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001561043.1 12690 R 398578 CDS YP_001561044.1 160895462 5745548 13737..14708 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: rme:Rmet_3811 uncharacterized protein UPF0065; hypothetical protein 14708 5745548 Daci_0012 Delftia acidovorans SPH-1 hypothetical protein YP_001561044.1 13737 D 398578 CDS YP_001561045.1 160895463 5745549 14720..15184 1 NC_010002.1 PFAM: MaoC domain protein dehydratase; KEGG: rme:Rmet_3812 MaoC-like dehydratase; dehydratase 15184 5745549 Daci_0013 Delftia acidovorans SPH-1 dehydratase YP_001561045.1 14720 D 398578 CDS YP_001561046.1 160895464 5745550 15195..15713 1 NC_010002.1 PFAM: protein of unknown function UPF0153; KEGG: ajs:Ajs_4149 protein of unknown function UPF0153; hypothetical protein 15713 5745550 Daci_0014 Delftia acidovorans SPH-1 hypothetical protein YP_001561046.1 15195 D 398578 CDS YP_001561047.1 160895465 5745551 complement(15884..17290) 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mms:mma_0288 two-component sensor histidine kinase; histidine kinase 17290 5745551 Daci_0015 Delftia acidovorans SPH-1 histidine kinase YP_001561047.1 15884 R 398578 CDS YP_001561048.1 160895466 5745552 complement(17295..18083) 1 NC_010002.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mms:mma_0289 two-components system response regulator; two component transcriptional regulator 18083 5745552 Daci_0016 Delftia acidovorans SPH-1 two component transcriptional regulator YP_001561048.1 17295 R 398578 CDS YP_001561049.1 160895467 5745553 complement(18230..19651) 1 NC_010002.1 PFAM: outer membrane efflux protein; KEGG: mxa:MXAN_7436 outer membrane efflux protein; outer membrane efflux protein 19651 5745553 Daci_0017 Delftia acidovorans SPH-1 outer membrane efflux protein YP_001561049.1 18230 R 398578 CDS YP_001561050.1 160895468 5745554 complement(19638..22742) 1 NC_010002.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: mxa:MXAN_7437 heavy metal efflux pump, CzcA family; CzcA family heavy metal efflux protein 22742 5745554 Daci_0018 Delftia acidovorans SPH-1 CzcA family heavy metal efflux protein YP_001561050.1 19638 R 398578 CDS YP_001561051.1 160895469 5745555 complement(22764..23912) 1 NC_010002.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: mxa:MXAN_7438 putative cobalt-zinc-cadmium resistance protein; RND family efflux transporter MFP subunit 23912 5745555 Daci_0019 Delftia acidovorans SPH-1 RND family efflux transporter MFP subunit YP_001561051.1 22764 R 398578 CDS YP_001561052.1 160895470 5745556 24333..24644 1 NC_010002.1 hypothetical protein 24644 5745556 Daci_0020 Delftia acidovorans SPH-1 hypothetical protein YP_001561052.1 24333 D 398578 CDS YP_001561053.1 160895471 5745557 24810..26888 1 NC_010002.1 helicase involved in DNA repair and perhaps also replication; ATP-dependent DNA helicase DinG 26888 dinG 5745557 dinG Delftia acidovorans SPH-1 ATP-dependent DNA helicase DinG YP_001561053.1 24810 D 398578 CDS YP_001561054.1 160895472 5745558 complement(28449..29111) 1 NC_010002.1 KEGG: aav:Aave_0023 hypothetical protein; hypothetical protein 29111 5745558 Daci_0022 Delftia acidovorans SPH-1 hypothetical protein YP_001561054.1 28449 R 398578 CDS YP_001561055.1 160895473 5745559 complement(29287..29841) 1 NC_010002.1 KEGG: ajs:Ajs_0007 hypothetical protein; hypothetical protein 29841 5745559 Daci_0023 Delftia acidovorans SPH-1 hypothetical protein YP_001561055.1 29287 R 398578 CDS YP_001561056.1 160895474 5745560 30152..31207 1 NC_010002.1 Required for efficient pilin antigenic variation; recombination associated protein 31207 rdgC 5745560 rdgC Delftia acidovorans SPH-1 recombination associated protein YP_001561056.1 30152 D 398578 CDS YP_001561057.1 160895475 5745561 complement(31268..32455) 1 NC_010002.1 catalyzes the formation of beta-ketovaleryl-CoA from acetyl-CoA and propionyl-CoA; beta-ketothiolase 32455 5745561 Daci_0025 Delftia acidovorans SPH-1 beta-ketothiolase YP_001561057.1 31268 R 398578 CDS YP_001561058.1 160895476 5745562 complement(32555..33343) 1 NC_010002.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rfr:Rfer_4068 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 33343 5745562 Daci_0026 Delftia acidovorans SPH-1 enoyl-CoA hydratase/isomerase YP_001561058.1 32555 R 398578 CDS YP_001561059.1 160895477 5745563 complement(33353..35188) 1 NC_010002.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rfr:Rfer_4067 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 35188 5745563 Daci_0027 Delftia acidovorans SPH-1 AMP-dependent synthetase/ligase YP_001561059.1 33353 R 398578 CDS YP_001561060.1 160895478 5745564 complement(35334..36152) 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rfr:Rfer_4066 ABC transporter related; ABC transporter-like protein 36152 5745564 Daci_0028 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001561060.1 35334 R 398578 CDS YP_001561061.1 160895479 5745565 complement(36178..37359) 1 NC_010002.1 PFAM: Extracellular ligand-binding receptor; KEGG: rfr:Rfer_4065 extracellular ligand-binding receptor; extracellular ligand-binding receptor 37359 5745565 Daci_0029 Delftia acidovorans SPH-1 extracellular ligand-binding receptor YP_001561061.1 36178 R 398578 CDS YP_001561062.1 160895480 5745566 complement(37397..38434) 1 NC_010002.1 PFAM: inner-membrane translocator; KEGG: rfr:Rfer_4064 inner-membrane translocator; inner-membrane translocator 38434 5745566 Daci_0030 Delftia acidovorans SPH-1 inner-membrane translocator YP_001561062.1 37397 R 398578 CDS YP_001561063.1 160895481 5745567 complement(38457..39338) 1 NC_010002.1 PFAM: inner-membrane translocator; KEGG: rfr:Rfer_4063 inner-membrane translocator; inner-membrane translocator 39338 5745567 Daci_0031 Delftia acidovorans SPH-1 inner-membrane translocator YP_001561063.1 38457 R 398578 CDS YP_001561064.1 160895482 5745568 complement(39335..40219) 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bpa:BPP2037 high-affinity branched-chain amino acid transport ATP-binding protein; ABC transporter-like protein 40219 5745568 Daci_0032 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001561064.1 39335 R 398578 CDS YP_001561065.1 160895483 5745569 40350..41120 1 NC_010002.1 PFAM: regulatory protein TetR; KEGG: rfr:Rfer_4061 transcriptional regulator, TetR family; TetR family transcriptional regulator 41120 5745569 Daci_0033 Delftia acidovorans SPH-1 TetR family transcriptional regulator YP_001561065.1 40350 D 398578 CDS YP_001561066.1 160895484 5745570 complement(41147..41581) 1 NC_010002.1 TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: ajs:Ajs_0017 putative transcriptional regulator, MerR family; MerR family transcriptional regulator 41581 5745570 Daci_0034 Delftia acidovorans SPH-1 MerR family transcriptional regulator YP_001561066.1 41147 R 398578 CDS YP_001561067.1 160895485 5745571 complement(41626..41820) 1 NC_010002.1 PFAM: Heavy metal transport/detoxification protein; KEGG: vei:Veis_1021 heavy metal transport/detoxification protein; heavy metal transport/detoxification protein 41820 5745571 Daci_0035 Delftia acidovorans SPH-1 heavy metal transport/detoxification protein YP_001561067.1 41626 R 398578 CDS YP_001561068.1 160895486 5745572 42121..43824 1 NC_010002.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: aav:Aave_0035 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 43824 5745572 Daci_0036 Delftia acidovorans SPH-1 methyl-accepting chemotaxis sensory transducer YP_001561068.1 42121 D 398578 CDS YP_001561069.1 160895487 5745573 complement(43930..45048) 1 NC_010002.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: ajs:Ajs_0022 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase 45048 5745573 Daci_0037 Delftia acidovorans SPH-1 NADH:flavin oxidoreductase YP_001561069.1 43930 R 398578 CDS YP_001561070.1 160895488 5745574 complement(45130..45711) 1 NC_010002.1 PFAM: NADPH-dependent FMN reductase; KEGG: azo:azo2988 probable chromate reductase; NADPH-dependent FMN reductase 45711 5745574 Daci_0038 Delftia acidovorans SPH-1 NADPH-dependent FMN reductase YP_001561070.1 45130 R 398578 CDS YP_001561071.1 160895489 5745575 complement(45716..46690) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: bja:blr3080 hypothetical protein; hypothetical protein 46690 5745575 Daci_0039 Delftia acidovorans SPH-1 hypothetical protein YP_001561071.1 45716 R 398578 CDS YP_001561072.1 160895490 5745576 complement(46791..47342) 1 NC_010002.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: eli:ELI_06420 glyoxalase family protein; glyoxalase/bleomycin resistance protein/dioxygenase 47342 5745576 Daci_0040 Delftia acidovorans SPH-1 glyoxalase/bleomycin resistance protein/dioxygenase YP_001561072.1 46791 R 398578 CDS YP_001561073.1 160895491 5745577 complement(47355..47741) 1 NC_010002.1 PFAM: NIPSNAP family containing protein; KEGG: rsh:Rsph17029_3880 NIPSNAP family containing protein; NIPSNAP family protein 47741 5745577 Daci_0041 Delftia acidovorans SPH-1 NIPSNAP family protein YP_001561073.1 47355 R 398578 CDS YP_001561074.1 160895492 5745578 complement(47755..48510) 1 NC_010002.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: swi:Swit_1570 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 48510 5745578 Daci_0042 Delftia acidovorans SPH-1 short-chain dehydrogenase/reductase SDR YP_001561074.1 47755 R 398578 CDS YP_001561075.1 160895493 5745579 48625..49398 1 NC_010002.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bpe:BP2655 putative IclR-family regulatory protein; IclR family transcriptional regulator 49398 5745579 Daci_0043 Delftia acidovorans SPH-1 IclR family transcriptional regulator YP_001561075.1 48625 D 398578 CDS YP_001561076.1 160895494 5745580 complement(49470..50120) 1 NC_010002.1 PFAM: Glutathione S-transferase domain; KEGG: ajs:Ajs_0023 glutathione S-transferase, C-terminal domain; glutathione S-transferase domain-containing protein 50120 5745580 Daci_0044 Delftia acidovorans SPH-1 glutathione S-transferase domain-containing protein YP_001561076.1 49470 R 398578 CDS YP_001561077.1 160895495 5745581 complement(50174..50761) 1 NC_010002.1 PFAM: NADPH-dependent FMN reductase; KEGG: aav:Aave_0050 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 50761 5745581 Daci_0045 Delftia acidovorans SPH-1 NADPH-dependent FMN reductase YP_001561077.1 50174 R 398578 CDS YP_001561078.1 160895496 5745582 51062..53041 1 NC_010002.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 53041 5745582 Daci_0046 Delftia acidovorans SPH-1 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_001561078.1 51062 D 398578 CDS YP_001561079.1 160895497 5745583 53038..53697 1 NC_010002.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB 53697 gidB 5745583 gidB Delftia acidovorans SPH-1 16S rRNA methyltransferase GidB YP_001561079.1 53038 D 398578 CDS YP_001561080.1 160895498 5745584 53804..54418 1 NC_010002.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: ajs:Ajs_0028 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA 54418 5745584 Daci_0048 Delftia acidovorans SPH-1 lysine exporter protein LysE/YggA YP_001561080.1 53804 D 398578 CDS YP_001561081.1 160895499 5745585 54432..55202 1 NC_010002.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: ajs:Ajs_0029 cobyrinic acid a,c-diamide synthase; cobyrinic acid ac-diamide synthase 55202 5745585 Daci_0049 Delftia acidovorans SPH-1 cobyrinic acid ac-diamide synthase YP_001561081.1 54432 D 398578 CDS YP_001561082.1 160895500 5745586 55374..55934 1 NC_010002.1 PFAM: protein of unknown function DUF1234; KEGG: aav:Aave_0055 protein of unknown function DUF1234; hypothetical protein 55934 5745586 Daci_0050 Delftia acidovorans SPH-1 hypothetical protein YP_001561082.1 55374 D 398578 CDS YP_001561083.1 160895501 5745587 55948..56883 1 NC_010002.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: aav:Aave_0056 ParB-like partition protein; parB-like partition protein 56883 5745587 Daci_0051 Delftia acidovorans SPH-1 parB-like partition protein YP_001561083.1 55948 D 398578 CDS YP_001561084.1 160895502 5745588 57079..58113 1 NC_010002.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: aav:Aave_0066 peptidoglycan-binding domain 1 protein; peptidoglycan-binding domain-containing protein 58113 5745588 Daci_0052 Delftia acidovorans SPH-1 peptidoglycan-binding domain-containing protein YP_001561084.1 57079 D 398578 CDS YP_001561085.1 160895503 5745589 58302..59123 1 NC_010002.1 KEGG: ajs:Ajs_0032 methyltransferase type 12; type 12 methyltransferase 59123 5745589 Daci_0053 Delftia acidovorans SPH-1 type 12 methyltransferase YP_001561085.1 58302 D 398578 CDS YP_001561086.1 160895504 5745590 complement(59137..59484) 1 NC_010002.1 KEGG: ajs:Ajs_0034 cytochrome c, class I; class I cytochrome c 59484 5745590 Daci_0054 Delftia acidovorans SPH-1 class I cytochrome c YP_001561086.1 59137 R 398578 CDS YP_001561087.1 160895505 5745591 complement(59571..60824) 1 NC_010002.1 PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: ajs:Ajs_0035 oxidoreductase, molybdopterin binding; molybdopterin-binding oxidoreductase 60824 5745591 Daci_0055 Delftia acidovorans SPH-1 molybdopterin-binding oxidoreductase YP_001561087.1 59571 R 398578 CDS YP_001561088.1 160895506 5745592 complement(60896..61483) 1 NC_010002.1 hypothetical protein 61483 5745592 Daci_0056 Delftia acidovorans SPH-1 hypothetical protein YP_001561088.1 60896 R 398578 CDS YP_001561089.1 160895507 5745593 complement(61480..62070) 1 NC_010002.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: ajs:Ajs_0037 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 62070 5745593 Daci_0057 Delftia acidovorans SPH-1 ECF subfamily RNA polymerase sigma-24 factor YP_001561089.1 61480 R 398578 CDS YP_001561090.1 160895508 5745594 complement(62127..63056) 1 NC_010002.1 PFAM: AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: aav:Aave_0082 transcriptional regulator, AraC family; AraC family transcriptional regulator 63056 5745594 Daci_0058 Delftia acidovorans SPH-1 AraC family transcriptional regulator YP_001561090.1 62127 R 398578 CDS YP_001561091.1 160895509 5745595 63263..64516 1 NC_010002.1 PFAM: major facilitator superfamily MFS_1; KEGG: aav:Aave_0083 major facilitator superfamily MFS_1; major facilitator transporter 64516 5745595 Daci_0059 Delftia acidovorans SPH-1 major facilitator transporter YP_001561091.1 63263 D 398578 CDS YP_001561092.1 160895510 5745596 64674..65963 1 NC_010002.1 catalyzes the release of C-terminal glutamate residues from N-acylating moieties; glutamate carboxypeptidase 65963 5745596 Daci_0060 Delftia acidovorans SPH-1 glutamate carboxypeptidase YP_001561092.1 64674 D 398578 CDS YP_001561093.1 160895511 5745597 complement(66152..67153) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: rme:Rmet_1755 twin-arginine translocation pathway signal; hypothetical protein 67153 5745597 Daci_0061 Delftia acidovorans SPH-1 hypothetical protein YP_001561093.1 66152 R 398578 CDS YP_001561094.1 160895512 5745598 complement(67225..68433) 1 NC_010002.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rme:Rmet_1756 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 68433 5745598 Daci_0062 Delftia acidovorans SPH-1 L-carnitine dehydratase/bile acid-inducible protein F YP_001561094.1 67225 R 398578 CDS YP_001561095.1 160895513 5745599 68563..69468 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rme:Rmet_1757 transcriptional regulator, LysR family; LysR family transcriptional regulator 69468 5745599 Daci_0063 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001561095.1 68563 D 398578 CDS YP_001561096.1 160895514 5745600 complement(69458..70882) 1 NC_010002.1 PFAM: FAD linked oxidase domain protein; KEGG: aav:Aave_0095 FAD linked oxidase domain protein; FAD linked oxidase domain-containing protein 70882 5745600 Daci_0064 Delftia acidovorans SPH-1 FAD linked oxidase domain-containing protein YP_001561096.1 69458 R 398578 CDS YP_001561097.1 160895515 5745601 complement(70965..71333) 1 NC_010002.1 KEGG: ajs:Ajs_0042 calcium-binding EF-hand-containing protein; signal transduction protein 71333 5745601 Daci_0065 Delftia acidovorans SPH-1 signal transduction protein YP_001561097.1 70965 R 398578 CDS YP_001561098.1 160895516 5745602 71515..72087 1 NC_010002.1 TIGRFAM: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: ajs:Ajs_0043 ATP--cobalamin adenosyltransferase; ATP--cobalamin adenosyltransferase 72087 5745602 Daci_0066 Delftia acidovorans SPH-1 ATP--cobalamin adenosyltransferase YP_001561098.1 71515 D 398578 CDS YP_001561099.1 160895517 5745603 72141..73046 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_1935 transcriptional regulator, LysR family; LysR family transcriptional regulator 73046 5745603 Daci_0067 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001561099.1 72141 D 398578 CDS YP_001561100.1 160895518 5745604 73214..74146 1 NC_010002.1 KEGG: mag:amb0959 uncharacterized membrane-bound protein; hypothetical protein 74146 5745604 Daci_0068 Delftia acidovorans SPH-1 hypothetical protein YP_001561100.1 73214 D 398578 CDS YP_001561101.1 160895519 5745605 complement(74836..76071) 1 NC_010002.1 PFAM: FAD dependent oxidoreductase; KEGG: pol:Bpro_1999 D-amino-acid dehydrogenase; D-amino-acid dehydrogenase 76071 5745605 Daci_0069 Delftia acidovorans SPH-1 D-amino-acid dehydrogenase YP_001561101.1 74836 R 398578 CDS YP_001561102.1 160895520 5745606 76294..77175 1 NC_010002.1 PFAM: extracellular solute-binding protein family 3; KEGG: vei:Veis_4737 extracellular solute-binding protein, family 3; extracellular solute-binding protein 77175 5745606 Daci_0070 Delftia acidovorans SPH-1 extracellular solute-binding protein YP_001561102.1 76294 D 398578 CDS YP_001561103.1 160895521 5745607 77190..77951 1 NC_010002.1 TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; KEGG: vei:Veis_4736 aspartate racemase; aspartate racemase 77951 5745607 Daci_0071 Delftia acidovorans SPH-1 aspartate racemase YP_001561103.1 77190 D 398578 CDS YP_001561104.1 160895522 5745608 complement(77945..79264) 1 NC_010002.1 TIGRFAM: benzoyl-CoA oxygenase/reductase, BoxA protein; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: vei:Veis_0734 oxidoreductase FAD/NAD(P)-binding domain protein; benzoyl-CoA oxygenase/reductase, BoxA protein 79264 5745608 Daci_0072 Delftia acidovorans SPH-1 benzoyl-CoA oxygenase/reductase, BoxA protein YP_001561104.1 77945 R 398578 CDS YP_001561105.1 160895523 5745609 complement(79291..80718) 1 NC_010002.1 KEGG: pna:Pnap_2943 benzoyl-CoA oxygenase component B; benzoyl-CoA oxygenase component B 80718 5745609 Daci_0073 Delftia acidovorans SPH-1 benzoyl-CoA oxygenase component B YP_001561105.1 79291 R 398578 CDS YP_001561106.1 160895524 5745610 complement(80757..82427) 1 NC_010002.1 cleaves the ring of 2,3-dihydro-2,3-dihydroxybenzoyl-CoA forming 6-hydroxy-3-hexenoyl-CoA; benzoyl-CoA-dihydrodiol lyase 82427 5745610 Daci_0074 Delftia acidovorans SPH-1 benzoyl-CoA-dihydrodiol lyase YP_001561106.1 80757 R 398578 CDS YP_001561107.1 160895525 5745611 complement(82621..83535) 1 NC_010002.1 consists of N-terminal helix-turn-helix domain and C-terminal shikimate kinase-like domain which may bind benzoyl-CoA; controls inducible expression of the bzd catabolic operon that is involved in the anaerobic catabolism of benzoate; anaerobic benzoate catabolism transcriptional regulator 83535 5745611 Daci_0075 Delftia acidovorans SPH-1 anaerobic benzoate catabolism transcriptional regulator YP_001561107.1 82621 R 398578 CDS YP_001561108.1 160895526 5745612 83710..85266 1 NC_010002.1 TIGRFAM: benzoate-CoA ligase family; PFAM: AMP-dependent synthetase and ligase; KEGG: reh:H16_B1918 benzoate-coenzyme A ligase; benzoate-CoA ligase family protein 85266 5745612 Daci_0076 Delftia acidovorans SPH-1 benzoate-CoA ligase family protein YP_001561108.1 83710 D 398578 CDS YP_001561109.1 160895527 5745613 85325..86488 1 NC_010002.1 PFAM: Extracellular ligand-binding receptor; KEGG: pna:Pnap_2950 extracellular ligand-binding receptor; extracellular ligand-binding receptor 86488 5745613 Daci_0077 Delftia acidovorans SPH-1 extracellular ligand-binding receptor YP_001561109.1 85325 D 398578 CDS YP_001561110.1 160895528 5745614 86539..87411 1 NC_010002.1 PFAM: inner-membrane translocator; KEGG: reh:H16_A1415 ABC-type transporter, permease component: HAAT family; inner-membrane translocator 87411 5745614 Daci_0078 Delftia acidovorans SPH-1 inner-membrane translocator YP_001561110.1 86539 D 398578 CDS YP_001561111.1 160895529 5745615 87415..88500 1 NC_010002.1 PFAM: inner-membrane translocator; KEGG: rfr:Rfer_0212 inner-membrane translocator; inner-membrane translocator 88500 5745615 Daci_0079 Delftia acidovorans SPH-1 inner-membrane translocator YP_001561111.1 87415 D 398578 CDS YP_001561112.1 160895530 5745616 88493..89251 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pna:Pnap_2953 ABC transporter related; ABC transporter-like protein 89251 5745616 Daci_0080 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001561112.1 88493 D 398578 CDS YP_001561113.1 160895531 5745617 89244..89957 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pna:Pnap_2954 ABC transporter related; ABC transporter-like protein 89957 5745617 Daci_0081 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001561113.1 89244 D 398578 CDS YP_001561114.1 160895532 5745618 complement(89990..90835) 1 NC_010002.1 PFAM: Domain of unknown function DUF1814; KEGG: xom:XOO_2997 hypothetical protein; hypothetical protein 90835 5745618 Daci_0082 Delftia acidovorans SPH-1 hypothetical protein YP_001561114.1 89990 R 398578 CDS YP_001561115.1 160895533 5745619 complement(90832..91446) 1 NC_010002.1 KEGG: xom:XOO_2998 hypothetical protein; hypothetical protein 91446 5745619 Daci_0083 Delftia acidovorans SPH-1 hypothetical protein YP_001561115.1 90832 R 398578 CDS YP_001561116.1 160895534 5745620 complement(91554..92027) 1 NC_010002.1 PFAM: thioesterase superfamily protein; KEGG: ajs:Ajs_0044 uncharacterized domain 1; thioesterase superfamily protein 92027 5745620 Daci_0084 Delftia acidovorans SPH-1 thioesterase superfamily protein YP_001561116.1 91554 R 398578 CDS YP_001561117.1 160895535 5745621 complement(92166..93680) 1 NC_010002.1 KEGG: ajs:Ajs_0046 acetyl-CoA hydrolase; TIGRFAM: succinate CoA transferase; PFAM: acetyl-CoA hydrolase/transferase; succinate CoA transferase 93680 5745621 Daci_0085 Delftia acidovorans SPH-1 succinate CoA transferase YP_001561117.1 92166 R 398578 CDS YP_001561118.1 160895536 5745622 complement(93888..95195) 1 NC_010002.1 TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: ajs:Ajs_0048 uracil-xanthine permease; uracil-xanthine permease 95195 5745622 Daci_0086 Delftia acidovorans SPH-1 uracil-xanthine permease YP_001561118.1 93888 R 398578 CDS YP_001561119.1 160895537 5745623 95340..97454 1 NC_010002.1 AcsA; in Sinorhizobium meliloti this enzyme is required for acetoacetate activation; similar to acetyl-CoA synthase; acetoacetyl-CoA synthetase 97454 5745623 Daci_0087 Delftia acidovorans SPH-1 acetoacetyl-CoA synthetase YP_001561119.1 95340 D 398578 CDS YP_001561120.1 160895538 5745624 97543..98700 1 NC_010002.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: ajs:Ajs_0061 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 98700 5745624 Daci_0088 Delftia acidovorans SPH-1 acyl-CoA dehydrogenase domain-containing protein YP_001561120.1 97543 D 398578 CDS YP_001561121.1 160895539 5745625 98869..99897 1 NC_010002.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: vei:Veis_4039 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 99897 5745625 Daci_0089 Delftia acidovorans SPH-1 acyl-CoA dehydrogenase domain-containing protein YP_001561121.1 98869 D 398578 CDS YP_001561122.1 160895540 5745626 99921..100709 1 NC_010002.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 100709 5745626 Daci_0090 Delftia acidovorans SPH-1 enoyl-CoA hydratase YP_001561122.1 99921 D 398578 CDS YP_001561123.1 160895541 5745627 100809..101624 1 NC_010002.1 TIGRFAM: septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC; KEGG: aav:Aave_0124 septum site-determining protein MinC; septum site-determining protein MinC 101624 5745627 Daci_0091 Delftia acidovorans SPH-1 septum site-determining protein MinC YP_001561123.1 100809 D 398578 CDS YP_001561124.1 160895542 5745628 101674..102486 1 NC_010002.1 TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: aav:Aave_0125 septum site-determining protein MinD; septum site-determining protein MinD 102486 5745628 Daci_0092 Delftia acidovorans SPH-1 septum site-determining protein MinD YP_001561124.1 101674 D 398578 CDS YP_001561125.1 160895543 5745629 102493..102756 1 NC_010002.1 TIGRFAM: cell division topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE; KEGG: ajs:Ajs_0067 cell division topological specificity factor MinE; cell division topological specificity factor MinE 102756 5745629 Daci_0093 Delftia acidovorans SPH-1 cell division topological specificity factor MinE YP_001561125.1 102493 D 398578 CDS YP_001561126.1 160895544 5745630 complement(102986..104047) 1 NC_010002.1 PFAM: amino acid permease-associated region; KEGG: pfl:PFL_0408 amino acid transporter; amino acid permease-associated protein 104047 5745630 Daci_0094 Delftia acidovorans SPH-1 amino acid permease-associated protein YP_001561126.1 102986 R 398578 CDS YP_001561127.1 160895545 5745632 complement(104602..105105) 1 NC_010002.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: vei:Veis_5008 flavin reductase domain protein, FMN-binding; flavin reductase domain-containing protein 105105 5745632 Daci_0096 Delftia acidovorans SPH-1 flavin reductase domain-containing protein YP_001561127.1 104602 R 398578 CDS YP_001561128.1 160895546 5745633 complement(105296..105931) 1 NC_010002.1 KEGG: ajs:Ajs_4160 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; DNA polymerase III subunit epsilon 105931 5745633 Daci_0097 Delftia acidovorans SPH-1 DNA polymerase III subunit epsilon YP_001561128.1 105296 R 398578 CDS YP_001561129.1 160895547 5745634 complement(105976..106476) 1 NC_010002.1 TIGRFAM: homoprotocatechuate degradation operon regulator, HpaR; PFAM: regulatory protein MarR; KEGG: bra:BRADO2596 putative homoprotocatechuate degradative operon repressor, transcriptional regulatory protein MarR family, HpcR-like; MarR family transcriptional regulator 106476 5745634 Daci_0098 Delftia acidovorans SPH-1 MarR family transcriptional regulator YP_001561129.1 105976 R 398578 CDS YP_001561130.1 160895548 5745635 complement(106551..107372) 1 NC_010002.1 KEGG: rha:RHA1_ro10138 4-hydroxy-2-oxovalerate aldolase; TIGRFAM: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; PFAM: HpcH/HpaI aldolase; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 107372 5745635 Daci_0099 Delftia acidovorans SPH-1 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase YP_001561130.1 106551 R 398578 CDS YP_001561131.1 160895549 5745636 complement(107391..108845) 1 NC_010002.1 TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: eba:ebA2996 succinate-semialdehyde dehydrogenase; succinate-semialdehyde dehydrogenase 108845 5745636 Daci_0100 Delftia acidovorans SPH-1 succinate-semialdehyde dehydrogenase YP_001561131.1 107391 R 398578 CDS YP_001561132.1 160895550 5745637 complement(108891..109724) 1 NC_010002.1 KEGG: bbr:BB0739 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; TIGRFAM: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; PFAM: Hydratase/decarboxylase; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 109724 5745637 Daci_0101 Delftia acidovorans SPH-1 2-oxo-hepta-3-ene-1,7-dioic acid hydratase YP_001561132.1 108891 R 398578 CDS YP_001561133.1 160895551 5745638 complement(109726..110160) 1 NC_010002.1 PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase; KEGG: bbr:BB0738 5-carboxymethyl-2-hydroxymuconate delta-isomerase; 5-carboxymethyl-2-hydroxymuconate isomerase 110160 5745638 Daci_0102 Delftia acidovorans SPH-1 5-carboxymethyl-2-hydroxymuconate isomerase YP_001561133.1 109726 R 398578 CDS YP_001561134.1 160895552 5745639 complement(110161..110979) 1 NC_010002.1 PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: swi:Swit_4311 extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; extradiol ring-cleavage dioxygenase class III protein subunit B 110979 5745639 Daci_0103 Delftia acidovorans SPH-1 extradiol ring-cleavage dioxygenase class III protein subunit B YP_001561134.1 110161 R 398578 CDS YP_001561135.1 160895553 5745640 complement(110981..111307) 1 NC_010002.1 PFAM: Extradiol ring-cleavage dioxygenase LigAB LigA subunit; KEGG: swi:Swit_4310 hypothetical protein; extradiol ring-cleavage dioxygenase LigAB LigA subunit 111307 5745640 Daci_0104 Delftia acidovorans SPH-1 extradiol ring-cleavage dioxygenase LigAB LigA subunit YP_001561135.1 110981 R 398578 CDS YP_001561136.1 160895554 5745641 complement(111328..112320) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0143 uncharacterized protein UPF0065; hypothetical protein 112320 5745641 Daci_0105 Delftia acidovorans SPH-1 hypothetical protein YP_001561136.1 111328 R 398578 CDS YP_001561137.1 160895555 5745642 complement(112366..113823) 1 NC_010002.1 TIGRFAM: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: bbr:BB0736 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase 113823 5745642 Daci_0106 Delftia acidovorans SPH-1 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase YP_001561137.1 112366 R 398578 CDS YP_001561138.1 160895556 5745643 complement(113852..114613) 1 NC_010002.1 KEGG: bcy:Bcer98_0972 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, HpaG2 subunit; TIGRFAM: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase,HpaG2 subunit; PFAM: fumarylacetoacetate (FAA) hydrolase; 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase subunit HpaG2 114613 5745643 Daci_0107 Delftia acidovorans SPH-1 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase subunit HpaG2 YP_001561138.1 113852 R 398578 CDS YP_001561139.1 160895557 5745644 complement(114610..115290) 1 NC_010002.1 KEGG: bte:BTH_II1735 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit; TIGRFAM: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, HpaG1 subunit; PFAM: fumarylacetoacetate (FAA) hydrolase; 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase subunit HpaG1 115290 5745644 Daci_0108 Delftia acidovorans SPH-1 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase subunit HpaG1 YP_001561139.1 114610 R 398578 CDS YP_001561140.1 160895558 5745645 complement(115464..119141) 1 NC_010002.1 PFAM: Fibronectin type III domain protein; KEGG: ava:Ava_4728 endonuclease/exonuclease/phosphatase; fibronectin type III domain-containing protein 119141 5745645 Daci_0109 Delftia acidovorans SPH-1 fibronectin type III domain-containing protein YP_001561140.1 115464 R 398578 CDS YP_001561141.1 160895559 5745646 complement(119345..119767) 1 NC_010002.1 PFAM: UspA domain protein; KEGG: ajs:Ajs_0074 UspA domain protein; UspA domain-containing protein 119767 5745646 Daci_0110 Delftia acidovorans SPH-1 UspA domain-containing protein YP_001561141.1 119345 R 398578 CDS YP_001561142.1 160895560 5745647 complement(119831..120730) 1 NC_010002.1 PFAM: metallophosphoesterase; KEGG: aav:Aave_0135 metallophosphoesterase; metallophosphoesterase 120730 5745647 Daci_0111 Delftia acidovorans SPH-1 metallophosphoesterase YP_001561142.1 119831 R 398578 CDS YP_001561143.1 160895561 5745648 complement(120779..121738) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pol:Bpro_0158 transcriptional regulator, LysR family; LysR family transcriptional regulator 121738 5745648 Daci_0112 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001561143.1 120779 R 398578 CDS YP_001561144.1 160895562 5745649 121880..122299 1 NC_010002.1 KEGG: ajs:Ajs_0077 hypothetical protein; hypothetical protein 122299 5745649 Daci_0113 Delftia acidovorans SPH-1 hypothetical protein YP_001561144.1 121880 D 398578 CDS YP_001561145.1 160895563 5745650 complement(122441..124306) 1 NC_010002.1 catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP; phosphoenolpyruvate carboxykinase 124306 5745650 Daci_0114 Delftia acidovorans SPH-1 phosphoenolpyruvate carboxykinase YP_001561145.1 122441 R 398578 CDS YP_001561146.1 160895564 5745651 complement(124632..124784) 1 NC_010002.1 KEGG: rfr:Rfer_0345 hypothetical protein; hypothetical protein 124784 5745651 Daci_0115 Delftia acidovorans SPH-1 hypothetical protein YP_001561146.1 124632 R 398578 CDS YP_001561147.1 160895565 5745652 complement(124875..126122) 1 NC_010002.1 catalyzes the formation of 2-oxobutanoate from L-threonine; threonine dehydratase 126122 5745652 Daci_0116 Delftia acidovorans SPH-1 threonine dehydratase YP_001561147.1 124875 R 398578 CDS YP_001561148.1 160895566 5745653 126210..127238 1 NC_010002.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bam:Bamb_1692 transcriptional regulator, AraC family; AraC family transcriptional regulator 127238 5745653 Daci_0117 Delftia acidovorans SPH-1 AraC family transcriptional regulator YP_001561148.1 126210 D 398578 CDS YP_001561149.1 160895567 5745654 127377..128489 1 NC_010002.1 PFAM: Siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: oan:Oant_1901 siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain-containing protein 128489 5745654 Daci_0118 Delftia acidovorans SPH-1 FAD-binding 9 siderophore-interacting domain-containing protein YP_001561149.1 127377 D 398578 CDS YP_001561150.1 160895568 5745655 complement(128511..130031) 1 NC_010002.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bur:Bcep18194_A3296 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 130031 5745655 Daci_0119 Delftia acidovorans SPH-1 AMP-dependent synthetase/ligase YP_001561150.1 128511 R 398578 CDS YP_001561151.1 160895569 5745656 complement(130077..131771) 1 NC_010002.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_0081 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 131771 5745656 Daci_0120 Delftia acidovorans SPH-1 acyl-CoA dehydrogenase domain-containing protein YP_001561151.1 130077 R 398578 CDS YP_001561152.1 160895570 5745657 131868..132476 1 NC_010002.1 PFAM: regulatory protein TetR; KEGG: bam:Bamb_0108 transcriptional regulator, TetR family; TetR family transcriptional regulator 132476 5745657 Daci_0121 Delftia acidovorans SPH-1 TetR family transcriptional regulator YP_001561152.1 131868 D 398578 CDS YP_001561153.1 160895571 5745658 complement(132518..133696) 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: aav:Aave_4320 histidine kinase; histidine kinase 133696 5745658 Daci_0122 Delftia acidovorans SPH-1 histidine kinase YP_001561153.1 132518 R 398578 CDS YP_001561154.1 160895572 5745659 complement(133681..134406) 1 NC_010002.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: aav:Aave_4321 two component transcriptional regulator, winged helix family; two component transcriptional regulator 134406 5745659 Daci_0123 Delftia acidovorans SPH-1 two component transcriptional regulator YP_001561154.1 133681 R 398578 CDS YP_001561155.1 160895573 5745660 complement(134540..135544) 1 NC_010002.1 PFAM: Fimbrial protein; KEGG: kpn:KPN_03276 putative fimbrial-like protein; fimbrial protein 135544 5745660 Daci_0124 Delftia acidovorans SPH-1 fimbrial protein YP_001561155.1 134540 R 398578 CDS YP_001561156.1 160895574 5745661 135577..137361 1 NC_010002.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: aav:Aave_4322 transcriptional regulator, fis family; RND efflux system outer membrane lipoprotein 137361 5745661 Daci_0125 Delftia acidovorans SPH-1 RND efflux system outer membrane lipoprotein YP_001561156.1 135577 D 398578 CDS YP_001561157.1 160895575 5745662 137358..138512 1 NC_010002.1 PFAM: protein of unknown function DUF214; KEGG: aav:Aave_4323 protein of unknown function DUF214; hypothetical protein 138512 5745662 Daci_0126 Delftia acidovorans SPH-1 hypothetical protein YP_001561157.1 137358 D 398578 CDS YP_001561158.1 160895576 5745663 138528..139286 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_4324 ABC transporter-related protein; ABC transporter-like protein 139286 5745663 Daci_0127 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001561158.1 138528 D 398578 CDS YP_001561159.1 160895577 5745664 139283..140227 1 NC_010002.1 PFAM: secretion protein HlyD family protein; KEGG: aav:Aave_4325 secretion protein HlyD family protein; secretion protein HlyD family protein 140227 5745664 Daci_0128 Delftia acidovorans SPH-1 secretion protein HlyD family protein YP_001561159.1 139283 D 398578 CDS YP_001561160.1 160895578 5745665 140220..140924 1 NC_010002.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; PFAM: HAD-superfamily hydrolase subfamily IB hypothetical 1; KEGG: aav:Aave_4326 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 140924 5745665 Daci_0129 Delftia acidovorans SPH-1 2,3-diketo-5-methylthio-1-phosphopentane phosphatase YP_001561160.1 140220 D 398578 CDS YP_001561161.1 160895579 5745666 140921..141862 1 NC_010002.1 PFAM: alpha/beta hydrolase fold; KEGG: aav:Aave_4327 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 141862 5745666 Daci_0130 Delftia acidovorans SPH-1 alpha/beta hydrolase fold protein YP_001561161.1 140921 D 398578 CDS YP_001561162.1 160895580 5745667 141852..142220 1 NC_010002.1 KEGG: aav:Aave_4328 hypothetical protein; hypothetical protein 142220 5745667 Daci_0131 Delftia acidovorans SPH-1 hypothetical protein YP_001561162.1 141852 D 398578 CDS YP_001561163.1 160895581 5745668 142385..142879 1 NC_010002.1 KEGG: aav:Aave_4329 hypothetical protein; hypothetical protein 142879 5745668 Daci_0132 Delftia acidovorans SPH-1 hypothetical protein YP_001561163.1 142385 D 398578 CDS YP_001561164.1 160895582 5745669 142872..144098 1 NC_010002.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: aav:Aave_4330 DegT/DnrJ/EryC1/StrS aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase 144098 5745669 Daci_0133 Delftia acidovorans SPH-1 DegT/DnrJ/EryC1/StrS aminotransferase YP_001561164.1 142872 D 398578 CDS YP_001561165.1 160895583 5745670 complement(144061..145383) 1 NC_010002.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mes:Meso_3871 cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase 145383 5745670 Daci_0134 Delftia acidovorans SPH-1 cyclopropane-fatty-acyl-phospholipid synthase YP_001561165.1 144061 R 398578 CDS YP_001561166.1 160895584 5745671 complement(145461..146372) 1 NC_010002.1 KEGG: aav:Aave_4331 hypothetical protein; hypothetical protein 146372 5745671 Daci_0135 Delftia acidovorans SPH-1 hypothetical protein YP_001561166.1 145461 R 398578 CDS YP_001561167.1 160895585 5745672 complement(146354..147427) 1 NC_010002.1 KEGG: aav:Aave_4332 hypothetical protein; hypothetical protein 147427 5745672 Daci_0136 Delftia acidovorans SPH-1 hypothetical protein YP_001561167.1 146354 R 398578 CDS YP_001561168.1 160895586 5745673 complement(147435..149063) 1 NC_010002.1 PFAM: aminotransferase class-III; KEGG: aav:Aave_4333 aminotransferase class-III; class III aminotransferase 149063 5745673 Daci_0137 Delftia acidovorans SPH-1 class III aminotransferase YP_001561168.1 147435 R 398578 CDS YP_001561169.1 160895587 5745674 149086..151518 1 NC_010002.1 TIGRFAM: TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: kpn:KPN_03087 outer membrane porin, receptor for ferric enterobactin and colicins B and D; TonB-dependent hemoglobin/transferrin/lactoferrin family receptor 151518 5745674 Daci_0138 Delftia acidovorans SPH-1 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor YP_001561169.1 149086 D 398578 CDS YP_001561170.1 160895588 5745675 151691..152179 1 NC_010002.1 KEGG: ccr:CC_2193 hypothetical protein; hypothetical protein 152179 5745675 Daci_0139 Delftia acidovorans SPH-1 hypothetical protein YP_001561170.1 151691 D 398578 CDS YP_001561171.1 160895589 5745676 152186..152995 1 NC_010002.1 KEGG: xcb:XC_1336 hypothetical protein; hypothetical protein 152995 5745676 Daci_0140 Delftia acidovorans SPH-1 hypothetical protein YP_001561171.1 152186 D 398578 CDS YP_001561172.1 160895590 5745677 complement(153096..155129) 1 NC_010002.1 KEGG: aav:Aave_0181 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases; ATP-dependent DNA helicase RecQ 155129 5745677 Daci_0141 Delftia acidovorans SPH-1 ATP-dependent DNA helicase RecQ YP_001561172.1 153096 R 398578 CDS YP_001561173.1 160895591 5745678 complement(155248..156399) 1 NC_010002.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: reh:H16_B0975 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 156399 5745678 Daci_0142 Delftia acidovorans SPH-1 acyl-CoA dehydrogenase domain-containing protein YP_001561173.1 155248 R 398578 CDS YP_001561174.1 160895592 5745679 complement(156410..157651) 1 NC_010002.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: reh:H16_B0974 predicted acyl-CoA transferase/carnitine dehydratase; L-carnitine dehydratase/bile acid-inducible protein F 157651 5745679 Daci_0143 Delftia acidovorans SPH-1 L-carnitine dehydratase/bile acid-inducible protein F YP_001561174.1 156410 R 398578 CDS YP_001561175.1 160895593 5745680 157746..158636 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_A0487 transcriptional regulator, LysR-family; LysR family transcriptional regulator 158636 5745680 Daci_0144 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001561175.1 157746 D 398578 CDS YP_001561176.1 160895594 5745681 158911..159885 1 NC_010002.1 KEGG: aav:Aave_2969 substrate-binding region of ABC-type glycine betaine transport system; glycine betaine ABC transporter substrate-binding protein 159885 5745681 Daci_0145 Delftia acidovorans SPH-1 glycine betaine ABC transporter substrate-binding protein YP_001561176.1 158911 D 398578 CDS YP_001561177.1 160895595 5745682 159898..160788 1 NC_010002.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_1046 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 160788 5745682 Daci_0146 Delftia acidovorans SPH-1 binding-protein-dependent transport system inner membrane protein YP_001561177.1 159898 D 398578 CDS YP_001561178.1 160895596 5745683 160788..161567 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pol:Bpro_1045 ABC transporter related; ABC transporter-like protein 161567 5745683 Daci_0147 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001561178.1 160788 D 398578 CDS YP_001561179.1 160895597 5745684 161577..162365 1 NC_010002.1 TIGRFAM: histidine utilization repressor; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: aav:Aave_2966 transcriptional regulator, histidine utilization repressor, GntR family; histidine utilization repressor 162365 5745684 Daci_0148 Delftia acidovorans SPH-1 histidine utilization repressor YP_001561179.1 161577 D 398578 CDS YP_001561180.1 160895598 5745685 162479..164050 1 NC_010002.1 catalyzes the degradation of histidine to urocanate and ammmonia; histidine ammonia-lyase 164050 5745685 Daci_0149 Delftia acidovorans SPH-1 histidine ammonia-lyase YP_001561180.1 162479 D 398578 CDS YP_001561181.1 160895599 5745686 164090..165823 1 NC_010002.1 catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; urocanate hydratase 165823 5745686 Daci_0150 Delftia acidovorans SPH-1 urocanate hydratase YP_001561181.1 164090 D 398578 CDS YP_001561182.1 160895600 5745687 165829..166407 1 NC_010002.1 PFAM: protein of unknown function DUF886; KEGG: aav:Aave_2962 protein of unknown function DUF886; hypothetical protein 166407 5745687 Daci_0151 Delftia acidovorans SPH-1 hypothetical protein YP_001561182.1 165829 D 398578 CDS YP_001561183.1 160895601 5745688 166437..167732 1 NC_010002.1 catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway; imidazolonepropionase 167732 5745688 Daci_0152 Delftia acidovorans SPH-1 imidazolonepropionase YP_001561183.1 166437 D 398578 CDS YP_001561184.1 160895602 5745689 167743..169131 1 NC_010002.1 PFAM: FAD linked oxidase domain protein; KEGG: bxe:Bxe_B1817 putative oxidoreductase; FAD linked oxidase domain-containing protein 169131 5745689 Daci_0153 Delftia acidovorans SPH-1 FAD linked oxidase domain-containing protein YP_001561184.1 167743 D 398578 CDS YP_001561185.1 160895603 5745690 169128..170273 1 NC_010002.1 catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate and L-glutamate from L-histidinol phosphate and 2-oxoglutarate; histidinol-phosphate aminotransferase 170273 5745690 Daci_0154 Delftia acidovorans SPH-1 histidinol-phosphate aminotransferase YP_001561185.1 169128 D 398578 CDS YP_001561186.1 160895604 5745691 170270..171670 1 NC_010002.1 catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate; N-formimino-L-glutamate deiminase 171670 5745691 Daci_0155 Delftia acidovorans SPH-1 N-formimino-L-glutamate deiminase YP_001561186.1 170270 D 398578 CDS YP_001561187.1 160895605 5745692 171685..172548 1 NC_010002.1 PFAM: N-formylglutamate amidohydrolase; KEGG: aav:Aave_2959 N-formylglutamate amidohydrolase; N-formylglutamate amidohydrolase 172548 5745692 Daci_0156 Delftia acidovorans SPH-1 N-formylglutamate amidohydrolase YP_001561187.1 171685 D 398578 CDS YP_001561188.1 160895606 5745693 complement(172549..173052) 1 NC_010002.1 TIGRFAM: redox-sensitive transcriptional activator SoxR; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: bte:BTH_II1612 redox-sensitive transcriptional activator SoxR; MerR family transcriptional regulator 173052 5745693 Daci_0157 Delftia acidovorans SPH-1 MerR family transcriptional regulator YP_001561188.1 172549 R 398578 CDS YP_001561189.1 160895607 5745694 173156..173659 1 NC_010002.1 KEGG: pap:PSPA7_4422 hypothetical protein; hypothetical protein 173659 5745694 Daci_0158 Delftia acidovorans SPH-1 hypothetical protein YP_001561189.1 173156 D 398578 CDS YP_001561190.1 160895608 5745695 173691..174524 1 NC_010002.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pap:PSPA7_4421 putative HTH-type transcriptional regulator YeaM; AraC family transcriptional regulator 174524 5745695 Daci_0159 Delftia acidovorans SPH-1 AraC family transcriptional regulator YP_001561190.1 173691 D 398578 CDS YP_001561191.1 160895609 5745696 complement(174545..176521) 1 NC_010002.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); KEGG: hch:HCH_03958 retron-type reverse transcriptase; RNA-directed DNA polymerase 176521 5745696 Daci_0160 Delftia acidovorans SPH-1 RNA-directed DNA polymerase YP_001561191.1 174545 R 398578 CDS YP_001561192.1 160895610 5745697 complement(176829..178556) 1 NC_010002.1 PFAM: zinc finger SWIM domain protein; KEGG: hch:HCH_03960 protein containing SWIM zinc finger domain; zinc finger SWIM domain-containing protein 178556 5745697 Daci_0161 Delftia acidovorans SPH-1 zinc finger SWIM domain-containing protein YP_001561192.1 176829 R 398578 CDS YP_001561193.1 160895611 5745698 complement(178588..181731) 1 NC_010002.1 KEGG: hch:HCH_03961 probable DNA binding protein containing WGR domain; hypothetical protein 181731 5745698 Daci_0162 Delftia acidovorans SPH-1 hypothetical protein YP_001561193.1 178588 R 398578 CDS YP_001561194.1 160895612 5745699 182181..183395 1 NC_010002.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bch:Bcen2424_4746 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 183395 5745699 Daci_0163 Delftia acidovorans SPH-1 RND family efflux transporter MFP subunit YP_001561194.1 182181 D 398578 CDS YP_001561195.1 160895613 5745700 183409..186603 1 NC_010002.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: bch:Bcen2424_4745 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; hydrophobe/amphiphile efflux-1 family protein 186603 5745700 Daci_0164 Delftia acidovorans SPH-1 hydrophobe/amphiphile efflux-1 family protein YP_001561195.1 183409 D 398578 CDS YP_001561196.1 160895614 5745701 186596..188029 1 NC_010002.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bch:Bcen2424_4744 RND efflux system, outer membrane lipoprotein, NodT family; RND efflux system outer membrane lipoprotein 188029 5745701 Daci_0165 Delftia acidovorans SPH-1 RND efflux system outer membrane lipoprotein YP_001561196.1 186596 D 398578 CDS YP_001561197.1 160895615 5745702 188179..189336 1 NC_010002.1 PFAM: FAD dependent oxidoreductase; KEGG: pfl:PFL_0805 FAD dependent oxidoreductase; FAD dependent oxidoreductase 189336 5745702 Daci_0166 Delftia acidovorans SPH-1 FAD dependent oxidoreductase YP_001561197.1 188179 D 398578 CDS YP_001561198.1 160895616 5745703 189398..190483 1 NC_010002.1 KEGG: pfl:PFL_0803 hypothetical protein; hypothetical protein 190483 5745703 Daci_0167 Delftia acidovorans SPH-1 hypothetical protein YP_001561198.1 189398 D 398578 CDS YP_001561199.1 160895617 5745704 190537..191220 1 NC_010002.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: pol:Bpro_1469 transcriptional regulator, XRE family; XRE family transcriptional regulator 191220 5745704 Daci_0168 Delftia acidovorans SPH-1 XRE family transcriptional regulator YP_001561199.1 190537 D 398578 CDS YP_001561200.1 160895618 5745705 191412..192518 1 NC_010002.1 PFAM: homocysteine S-methyltransferase; KEGG: aav:Aave_0174 methionine synthase; homocysteine S-methyltransferase 192518 5745705 Daci_0169 Delftia acidovorans SPH-1 homocysteine S-methyltransferase YP_001561200.1 191412 D 398578 CDS YP_001561201.1 160895619 5745706 192541..193977 1 NC_010002.1 KEGG: aav:Aave_0187 putative Fe-S oxidoreductase; putative Fe-S oxidoreductase 193977 5745706 Daci_0170 Delftia acidovorans SPH-1 putative Fe-S oxidoreductase YP_001561201.1 192541 D 398578 CDS YP_001561202.1 160895620 5745707 194297..195295 1 NC_010002.1 PFAM: porin Gram-negative type; KEGG: ajs:Ajs_0134 porin, gram-negative type; porin 195295 5745707 Daci_0171 Delftia acidovorans SPH-1 porin YP_001561202.1 194297 D 398578 CDS YP_001561203.1 160895621 5745708 complement(195296..196948) 1 NC_010002.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mms:mma_0161 methyl-accepting chemotaxis transducer transmembrane protein; methyl-accepting chemotaxis sensory transducer 196948 5745708 Daci_0172 Delftia acidovorans SPH-1 methyl-accepting chemotaxis sensory transducer YP_001561203.1 195296 R 398578 CDS YP_001561204.1 160895622 5745709 complement(197543..198844) 1 NC_010002.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: ajs:Ajs_0133 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 198844 5745709 Daci_0173 Delftia acidovorans SPH-1 L-carnitine dehydratase/bile acid-inducible protein F YP_001561204.1 197543 R 398578 CDS YP_001561205.1 160895623 5745710 199007..199921 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_0132 transcriptional regulator, LysR family; LysR family transcriptional regulator 199921 5745710 Daci_0174 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001561205.1 199007 D 398578 CDS YP_001561206.1 160895624 5745711 complement(199958..200386) 1 NC_010002.1 PFAM: thioesterase superfamily protein; KEGG: ajs:Ajs_0131 uncharacterized domain 1; thioesterase superfamily protein 200386 5745711 Daci_0175 Delftia acidovorans SPH-1 thioesterase superfamily protein YP_001561206.1 199958 R 398578 CDS YP_001561207.1 160895625 5745712 complement(200383..201540) 1 NC_010002.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_0130 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 201540 5745712 Daci_0176 Delftia acidovorans SPH-1 acyl-CoA dehydrogenase domain-containing protein YP_001561207.1 200383 R 398578 CDS YP_001561208.1 160895626 5745713 complement(201563..202774) 1 NC_010002.1 KEGG: ajs:Ajs_0129 thiolase; thiolase 202774 5745713 Daci_0177 Delftia acidovorans SPH-1 thiolase YP_001561208.1 201563 R 398578 CDS YP_001561209.1 160895627 5745714 complement(202771..203175) 1 NC_010002.1 PFAM: protein of unknown function DUF35; KEGG: ajs:Ajs_0128 protein of unknown function DUF35; hypothetical protein 203175 5745714 Daci_0178 Delftia acidovorans SPH-1 hypothetical protein YP_001561209.1 202771 R 398578 CDS YP_001561210.1 160895628 5745715 203540..204772 1 NC_010002.1 PFAM: Acetamidase/Formamidase; KEGG: pol:Bpro_0569 formamidase; formamidase 204772 5745715 Daci_0179 Delftia acidovorans SPH-1 formamidase YP_001561210.1 203540 D 398578 CDS YP_001561211.1 160895629 5745716 204790..205143 1 NC_010002.1 TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: pol:Bpro_0570 regulatory protein, putative; FmdB family regulatory protein 205143 5745716 Daci_0180 Delftia acidovorans SPH-1 FmdB family regulatory protein YP_001561211.1 204790 D 398578 CDS YP_001561212.1 160895630 5745717 205290..206315 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0127 uncharacterized protein UPF0065; hypothetical protein 206315 5745717 Daci_0181 Delftia acidovorans SPH-1 hypothetical protein YP_001561212.1 205290 D 398578 CDS YP_001561213.1 160895631 5745718 206462..207703 1 NC_010002.1 PFAM: Extracellular ligand-binding receptor; KEGG: rme:Rmet_1640 putative UreA/short-chain amide ABC transporter; extracellular ligand-binding receptor 207703 5745718 Daci_0182 Delftia acidovorans SPH-1 extracellular ligand-binding receptor YP_001561213.1 206462 D 398578 CDS YP_001561214.1 160895632 5745719 207700..208830 1 NC_010002.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sme:SMc03929 putative zinc-type alcohol dehydrogenase transmembrane protein; alcohol dehydrogenase 208830 5745719 Daci_0183 Delftia acidovorans SPH-1 alcohol dehydrogenase YP_001561214.1 207700 D 398578 CDS YP_001561215.1 160895633 5745720 complement(208894..210336) 1 NC_010002.1 PFAM: Amidase; KEGG: rrs:RoseRS_3083 amidase; amidase 210336 5745720 Daci_0184 Delftia acidovorans SPH-1 amidase YP_001561215.1 208894 R 398578 CDS YP_001561216.1 160895634 5745721 complement(210507..211478) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: reu:Reut_B3884 hypothetical protein; hypothetical protein 211478 5745721 Daci_0185 Delftia acidovorans SPH-1 hypothetical protein YP_001561216.1 210507 R 398578 CDS YP_001561217.1 160895635 5745722 complement(211834..213345) 1 NC_010002.1 PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_0126 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 213345 5745722 Daci_0186 Delftia acidovorans SPH-1 AMP-dependent synthetase/ligase YP_001561217.1 211834 R 398578 CDS YP_001561218.1 160895636 5745723 complement(213360..214358) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0125 uncharacterized protein UPF0065; hypothetical protein 214358 5745723 Daci_0187 Delftia acidovorans SPH-1 hypothetical protein YP_001561218.1 213360 R 398578 CDS YP_001561219.1 160895637 5745724 complement(214514..215578) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rme:Rmet_4850 transcriptional regulator, LysR family; LysR family transcriptional regulator 215578 5745724 Daci_0188 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001561219.1 214514 R 398578 CDS YP_001561220.1 160895638 5745725 215624..216832 1 NC_010002.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: reh:H16_B2003 predicted acyl-CoA transferase/carnitine dehydratase; L-carnitine dehydratase/bile acid-inducible protein F 216832 5745725 Daci_0189 Delftia acidovorans SPH-1 L-carnitine dehydratase/bile acid-inducible protein F YP_001561220.1 215624 D 398578 CDS YP_001561221.1 160895639 5745726 216889..217908 1 NC_010002.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: reh:H16_B2004 NADPH:quinone reductase or related Zn-dependent oxidoreductase; alcohol dehydrogenase 217908 5745726 Daci_0190 Delftia acidovorans SPH-1 alcohol dehydrogenase YP_001561221.1 216889 D 398578 CDS YP_001561222.1 160895640 5745727 217905..218912 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: reh:H16_B2005 probable extra-cytoplasmic solute receptor; hypothetical protein 218912 5745727 Daci_0191 Delftia acidovorans SPH-1 hypothetical protein YP_001561222.1 217905 D 398578 CDS YP_001561223.1 160895641 5745728 complement(219150..220358) 1 NC_010002.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 220358 5745728 Daci_0192 Delftia acidovorans SPH-1 acetyl-CoA acetyltransferase YP_001561223.1 219150 R 398578 CDS YP_001561224.1 160895642 5745729 complement(220394..221695) 1 NC_010002.1 KEGG: ajs:Ajs_0123 acetyl-CoA hydrolase/transferase; acetyl-CoA hydrolase/transferase 221695 5745729 Daci_0193 Delftia acidovorans SPH-1 acetyl-CoA hydrolase/transferase YP_001561224.1 220394 R 398578 CDS YP_001561225.1 160895643 5745730 complement(221692..222489) 1 NC_010002.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ajs:Ajs_0122 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 222489 5745730 Daci_0194 Delftia acidovorans SPH-1 enoyl-CoA hydratase/isomerase YP_001561225.1 221692 R 398578 CDS YP_001561226.1 160895644 5745731 complement(222541..223488) 1 NC_010002.1 PFAM: MaoC domain protein dehydratase; KEGG: ajs:Ajs_0121 MaoC domain protein dehydratase; 3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase 223488 5745731 Daci_0195 Delftia acidovorans SPH-1 3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase YP_001561226.1 222541 R 398578 CDS YP_001561227.1 160895645 5745732 complement(223606..224610) 1 NC_010002.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ajs:Ajs_0120 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 224610 5745732 Daci_0196 Delftia acidovorans SPH-1 short-chain dehydrogenase/reductase SDR YP_001561227.1 223606 R 398578 CDS YP_001561228.1 160895646 5745733 224731..225636 1 NC_010002.1 KEGG: ajs:Ajs_0119 hypothetical protein; hypothetical protein 225636 5745733 Daci_0197 Delftia acidovorans SPH-1 hypothetical protein YP_001561228.1 224731 D 398578 CDS YP_001561229.1 160895647 5745734 225667..226833 1 NC_010002.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: reh:H16_B1367 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 226833 5745734 Daci_0198 Delftia acidovorans SPH-1 acyl-CoA dehydrogenase domain-containing protein YP_001561229.1 225667 D 398578 CDS YP_001561230.1 160895648 5745735 226844..228046 1 NC_010002.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: ajs:Ajs_0117 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 228046 5745735 Daci_0199 Delftia acidovorans SPH-1 L-carnitine dehydratase/bile acid-inducible protein F YP_001561230.1 226844 D 398578 CDS YP_001561231.1 160895649 5745736 228088..229452 1 NC_010002.1 PFAM: MmgE/PrpD family protein; KEGG: ajs:Ajs_0116 MmgE/PrpD family protein; MmgE/PrpD family protein 229452 5745736 Daci_0200 Delftia acidovorans SPH-1 MmgE/PrpD family protein YP_001561231.1 228088 D 398578 CDS YP_001561232.1 160895650 5745737 229556..230563 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0115 uncharacterized protein UPF0065; hypothetical protein 230563 5745737 Daci_0201 Delftia acidovorans SPH-1 hypothetical protein YP_001561232.1 229556 D 398578 CDS YP_001561233.1 160895651 5745738 230587..231459 1 NC_010002.1 PFAM: HpcH/HpaI aldolase; KEGG: ajs:Ajs_0114 HpcH/HpaI aldolase; HpcH/HpaI aldolase 231459 5745738 Daci_0202 Delftia acidovorans SPH-1 HpcH/HpaI aldolase YP_001561233.1 230587 D 398578 CDS YP_001561234.1 160895652 5745739 231646..232713 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0101 uncharacterized protein UPF0065; hypothetical protein 232713 5745739 Daci_0203 Delftia acidovorans SPH-1 hypothetical protein YP_001561234.1 231646 D 398578 CDS YP_001561235.1 160895653 5745740 232852..233397 1 NC_010002.1 hypothetical protein 233397 5745740 Daci_0204 Delftia acidovorans SPH-1 hypothetical protein YP_001561235.1 232852 D 398578 CDS YP_001561236.1 160895654 5745741 complement(233475..234017) 1 NC_010002.1 KEGG: aav:Aave_1934 hypothetical protein; hypothetical protein 234017 5745741 Daci_0205 Delftia acidovorans SPH-1 hypothetical protein YP_001561236.1 233475 R 398578 CDS YP_001561237.1 160895655 5745742 complement(234050..234460) 1 NC_010002.1 KEGG: stm:STM0283 putative inner membrane protein; hypothetical protein 234460 5745742 Daci_0206 Delftia acidovorans SPH-1 hypothetical protein YP_001561237.1 234050 R 398578 CDS YP_001561238.1 160895656 5745743 complement(234499..234981) 1 NC_010002.1 PFAM: thioesterase superfamily protein; KEGG: ajs:Ajs_0100 uncharacterized domain 1; thioesterase superfamily protein 234981 5745743 Daci_0207 Delftia acidovorans SPH-1 thioesterase superfamily protein YP_001561238.1 234499 R 398578 CDS YP_001561239.1 160895657 5745744 complement(234978..235985) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0099 uncharacterized protein UPF0065; hypothetical protein 235985 5745744 Daci_0208 Delftia acidovorans SPH-1 hypothetical protein YP_001561239.1 234978 R 398578 CDS YP_001561240.1 160895658 5745745 complement(235982..237562) 1 NC_010002.1 PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_0098 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 237562 5745745 Daci_0209 Delftia acidovorans SPH-1 AMP-dependent synthetase/ligase YP_001561240.1 235982 R 398578 CDS YP_001561241.1 160895659 5745746 complement(237592..238560) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0097 uncharacterized protein UPF0065; hypothetical protein 238560 5745746 Daci_0210 Delftia acidovorans SPH-1 hypothetical protein YP_001561241.1 237592 R 398578 CDS YP_001561242.1 160895660 5745747 complement(238881..240185) 1 NC_010002.1 PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: aav:Aave_0188 Glu/Leu/Phe/Val dehydrogenase, C terminal; Glu/Leu/Phe/Val dehydrogenase 240185 5745747 Daci_0211 Delftia acidovorans SPH-1 Glu/Leu/Phe/Val dehydrogenase YP_001561242.1 238881 R 398578 CDS YP_001561243.1 160895661 5745748 240362..241180 1 NC_010002.1 KEGG: reh:H16_B1174 hypothetical protein; hypothetical protein 241180 5745748 Daci_0212 Delftia acidovorans SPH-1 hypothetical protein YP_001561243.1 240362 D 398578 CDS YP_001561244.1 160895662 5745749 complement(241205..242077) 1 NC_010002.1 PFAM: protein of unknown function DUF344; KEGG: aav:Aave_0190 protein of unknown function DUF344; hypothetical protein 242077 5745749 Daci_0213 Delftia acidovorans SPH-1 hypothetical protein YP_001561244.1 241205 R 398578 CDS YP_001561245.1 160895663 5745750 complement(242106..242519) 1 NC_010002.1 hypothetical protein 242519 5745750 Daci_0214 Delftia acidovorans SPH-1 hypothetical protein YP_001561245.1 242106 R 398578 CDS YP_001561246.1 160895664 5745751 complement(242516..244165) 1 NC_010002.1 KEGG: rso:RS01899 probable hemagglutinin-related transmembrane protein; putative hemagglutinin-like transmembrane protein 244165 5745751 Daci_0215 Delftia acidovorans SPH-1 putative hemagglutinin-like transmembrane protein YP_001561246.1 242516 R 398578 CDS YP_001561247.1 160895665 5745752 complement(244318..245229) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_0137 transcriptional regulator, LysR family; LysR family transcriptional regulator 245229 5745752 Daci_0216 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001561247.1 244318 R 398578 CDS YP_001561248.1 160895666 5745753 245304..245798 1 NC_010002.1 PFAM: transmembrane pair domain protein; KEGG: ajs:Ajs_0138 transmembrane pair domain protein; transmembrane pair domain-containing protein 245798 5745753 Daci_0217 Delftia acidovorans SPH-1 transmembrane pair domain-containing protein YP_001561248.1 245304 D 398578 CDS YP_001561249.1 160895667 5745754 complement(245771..246790) 1 NC_010002.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: pol:Bpro_0562 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 246790 5745754 Daci_0218 Delftia acidovorans SPH-1 two component LuxR family transcriptional regulator YP_001561249.1 245771 R 398578 CDS YP_001561250.1 160895668 5745755 complement(246783..250283) 1 NC_010002.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pol:Bpro_0563 periplasmic sensor hybrid histidine kinase; histidine kinase 250283 5745755 Daci_0219 Delftia acidovorans SPH-1 histidine kinase YP_001561250.1 246783 R 398578 CDS YP_001561251.1 160895669 5745756 250498..251763 1 NC_010002.1 TIGRFAM: urea ABC transporter, urea binding protein; KEGG: mpt:Mpe_A3587 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein; urea ABC transporter urea-binding protein 251763 5745756 Daci_0220 Delftia acidovorans SPH-1 urea ABC transporter urea-binding protein YP_001561251.1 250498 D 398578 CDS YP_001561252.1 160895670 5745757 251874..252788 1 NC_010002.1 TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; KEGG: mpt:Mpe_A3588 branched-chain amino acid ABC transporter, permease protein; urea ABC transporter permease UrtB 252788 5745757 Daci_0221 Delftia acidovorans SPH-1 urea ABC transporter permease UrtB YP_001561252.1 251874 D 398578 CDS YP_001561253.1 160895671 5745758 252860..254050 1 NC_010002.1 TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; KEGG: mpt:Mpe_A3589 branched-chain amino acid ABC transporter, permease protein; urea ABC transporter permease UrtC 254050 5745758 Daci_0222 Delftia acidovorans SPH-1 urea ABC transporter permease UrtC YP_001561253.1 252860 D 398578 CDS YP_001561254.1 160895672 5745759 254070..254813 1 NC_010002.1 TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related; KEGG: mpt:Mpe_A3590 branched-chain amino acid ABC transporter, ATP-binding protein; urea ABC transporter ATP-binding protein UrtD 254813 5745759 Daci_0223 Delftia acidovorans SPH-1 urea ABC transporter ATP-binding protein UrtD YP_001561254.1 254070 D 398578 CDS YP_001561255.1 160895673 5745760 254834..255523 1 NC_010002.1 KEGG: mpt:Mpe_A3591 ABC transporter ATP-binding protein; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; SMART: AAA ATPase; urea ABC transporter ATP-binding protein UrtE 255523 5745760 Daci_0224 Delftia acidovorans SPH-1 urea ABC transporter ATP-binding protein UrtE YP_001561255.1 254834 D 398578 CDS YP_001561256.1 160895674 5745761 255560..256789 1 NC_010002.1 PFAM: Acetamidase/Formamidase; KEGG: bxe:Bxe_B1706 formamidase (FmdA); formamidase 256789 5745761 Daci_0225 Delftia acidovorans SPH-1 formamidase YP_001561256.1 255560 D 398578 CDS YP_001561257.1 160895675 5745762 256836..257195 1 NC_010002.1 TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: mpt:Mpe_A3593 regulatory protein, putative; FmdB family regulatory protein 257195 5745762 Daci_0226 Delftia acidovorans SPH-1 FmdB family regulatory protein YP_001561257.1 256836 D 398578 CDS YP_001561258.1 160895676 5745763 complement(257266..258012) 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rso:RSc2106 probable amino-acid ATP-binding ABC transporter protein; ABC transporter-like protein 258012 5745763 Daci_0227 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001561258.1 257266 R 398578 CDS YP_001561259.1 160895677 5745764 complement(257999..258652) 1 NC_010002.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_0209 polar amino acid ABC transporter, inner membrane subunit; polar amino acid ABC transporter inner membrane protein 258652 5745764 Daci_0228 Delftia acidovorans SPH-1 polar amino acid ABC transporter inner membrane protein YP_001561259.1 257999 R 398578 CDS YP_001561260.1 160895678 5745765 complement(258649..259377) 1 NC_010002.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc2104 probable amino-acid transmembrane ABC transporter protein; polar amino acid ABC transporter inner membrane protein 259377 5745765 Daci_0229 Delftia acidovorans SPH-1 polar amino acid ABC transporter inner membrane protein YP_001561260.1 258649 R 398578 CDS YP_001561261.1 160895679 5745766 complement(259409..260215) 1 NC_010002.1 PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: aav:Aave_0211 extracellular solute-binding protein, family 3; extracellular solute-binding protein 260215 5745766 Daci_0230 Delftia acidovorans SPH-1 extracellular solute-binding protein YP_001561261.1 259409 R 398578 CDS YP_001561262.1 160895680 5745767 complement(260212..261018) 1 NC_010002.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: rso:RSc2102 probable transcription regulator protein; GntR family transcriptional regulator 261018 5745767 Daci_0231 Delftia acidovorans SPH-1 GntR family transcriptional regulator YP_001561262.1 260212 R 398578 CDS YP_001561263.1 160895681 5745768 261450..264206 1 NC_010002.1 KEGG: aav:Aave_0214 methionine synthase; TIGRFAM: methionine synthase; PFAM: dihydropteroate synthase DHPS; Methionine synthase B12-binding module cap domain protein; Vitamin B12 dependent methionine synthase activation region; cobalamin B12-binding domain protein; methionine synthase 264206 5745768 Daci_0232 Delftia acidovorans SPH-1 methionine synthase YP_001561263.1 261450 D 398578 CDS YP_001561264.1 160895682 5745769 complement(264389..264733) 1 NC_010002.1 KEGG: bov:BOV_A0145 hypothetical protein; hypothetical protein 264733 5745769 Daci_0233 Delftia acidovorans SPH-1 hypothetical protein YP_001561264.1 264389 R 398578 CDS YP_001561265.1 160895683 5745770 complement(264762..265268) 1 NC_010002.1 KEGG: bpa:BPP0722 hypothetical protein; hypothetical protein 265268 5745770 Daci_0234 Delftia acidovorans SPH-1 hypothetical protein YP_001561265.1 264762 R 398578 CDS YP_001561266.1 160895684 5745771 complement(265592..266950) 1 NC_010002.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: pol:Bpro_3128 glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 266950 5745771 Daci_0235 Delftia acidovorans SPH-1 glycerophosphoryl diester phosphodiesterase YP_001561266.1 265592 R 398578 CDS YP_001561267.1 160895685 5745772 complement(267107..267793) 1 NC_010002.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: aav:Aave_1099 transcriptional regulator, GntR family; GntR family transcriptional regulator 267793 5745772 Daci_0236 Delftia acidovorans SPH-1 GntR family transcriptional regulator YP_001561267.1 267107 R 398578 CDS YP_001561268.1 160895686 5745773 complement(267790..269133) 1 NC_010002.1 involved in the transport of C4-dicarboxylates across the membrane; C4-dicarboxylate transporter DctA 269133 5745773 Daci_0237 Delftia acidovorans SPH-1 C4-dicarboxylate transporter DctA YP_001561268.1 267790 R 398578 CDS YP_001561269.1 160895687 5745774 complement(269452..270765) 1 NC_010002.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bja:blr0239 probable citrate-proton symporter; major facilitator transporter 270765 5745774 Daci_0238 Delftia acidovorans SPH-1 major facilitator transporter YP_001561269.1 269452 R 398578 CDS YP_001561270.1 160895688 5745775 270807..272093 1 NC_010002.1 catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; acetylornithine deacetylase 272093 5745775 Daci_0239 Delftia acidovorans SPH-1 acetylornithine deacetylase YP_001561270.1 270807 D 398578 CDS YP_001561271.1 160895689 5745776 272174..272587 1 NC_010002.1 TIGRFAM: alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein; KEGG: rfr:Rfer_3747 alkylphosphonate utilization operon protein PhnA; alkylphosphonate utilization operon protein PhnA 272587 5745776 Daci_0240 Delftia acidovorans SPH-1 alkylphosphonate utilization operon protein PhnA YP_001561271.1 272174 D 398578 CDS YP_001561272.1 160895690 5745777 272590..273621 1 NC_010002.1 hypothetical protein 273621 5745777 Daci_0241 Delftia acidovorans SPH-1 hypothetical protein YP_001561272.1 272590 D 398578 CDS YP_001561273.1 160895691 5745778 complement(273618..274253) 1 NC_010002.1 PFAM: pseudouridine synthase; KEGG: ajs:Ajs_2497 pseudouridine synthase; pseudouridine synthase 274253 5745778 Daci_0242 Delftia acidovorans SPH-1 pseudouridine synthase YP_001561273.1 273618 R 398578 CDS YP_001561274.1 160895692 5745779 complement(274258..275166) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bpd:BURPS668_0024 transcriptional regulator, LysR family; LysR family transcriptional regulator 275166 5745779 Daci_0243 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001561274.1 274258 R 398578 CDS YP_001561275.1 160895693 5745780 275243..275716 1 NC_010002.1 PFAM: LrgA family protein; KEGG: cvi:CV_1151 probable murein hydrolase exporter; LrgA family protein 275716 5745780 Daci_0244 Delftia acidovorans SPH-1 LrgA family protein YP_001561275.1 275243 D 398578 CDS YP_001561276.1 160895694 5745781 275722..276414 1 NC_010002.1 PFAM: LrgB family protein; KEGG: spe:Spro_4427 LrgB family protein; LrgB family protein 276414 5745781 Daci_0245 Delftia acidovorans SPH-1 LrgB family protein YP_001561276.1 275722 D 398578 CDS YP_001561277.1 160895695 5745782 277305..277619 1 NC_010002.1 KEGG: rso:RSc1866 hypothetical protein; hypothetical protein 277619 5745782 Daci_0246 Delftia acidovorans SPH-1 hypothetical protein YP_001561277.1 277305 D 398578 CDS YP_001561278.1 160895696 5745783 complement(277724..279172) 1 NC_010002.1 PFAM: Aldehyde Dehydrogenase_; KEGG: ajs:Ajs_1126 aldehyde dehydrogenase; aldehyde dehydrogenase 279172 5745783 Daci_0247 Delftia acidovorans SPH-1 aldehyde dehydrogenase YP_001561278.1 277724 R 398578 CDS YP_001561279.1 160895697 5745784 complement(279209..280546) 1 NC_010002.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: ajs:Ajs_1990 glucarate dehydratase; glucarate dehydratase 280546 5745784 Daci_0248 Delftia acidovorans SPH-1 glucarate dehydratase YP_001561279.1 279209 R 398578 CDS YP_001561280.1 160895698 5745785 complement(280591..281577) 1 NC_010002.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: ajs:Ajs_1991 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 281577 5745785 Daci_0249 Delftia acidovorans SPH-1 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_001561280.1 280591 R 398578 CDS YP_001561281.1 160895699 5745786 complement(281683..282642) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_1992 uncharacterized protein UPF0065; hypothetical protein 282642 5745786 Daci_0250 Delftia acidovorans SPH-1 hypothetical protein YP_001561281.1 281683 R 398578 CDS YP_001561282.1 160895700 5745787 complement(282701..283612) 1 NC_010002.1 catalyzes the formation of 2,5-dioxopentanoate from 5-dehydro-4-deoxy-D-glucarate; 5-dehydro-4-deoxyglucarate dehydratase 283612 5745787 Daci_0251 Delftia acidovorans SPH-1 5-dehydro-4-deoxyglucarate dehydratase YP_001561282.1 282701 R 398578 CDS YP_001561283.1 160895701 5745788 complement(283659..284636) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: aav:Aave_2588 uncharacterized protein UPF0065; hypothetical protein 284636 5745788 Daci_0252 Delftia acidovorans SPH-1 hypothetical protein YP_001561283.1 283659 R 398578 CDS YP_001561284.1 160895702 5745789 complement(284785..285573) 1 NC_010002.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: ajs:Ajs_1995 GntR domain protein; GntR family transcriptional regulator 285573 5745789 Daci_0253 Delftia acidovorans SPH-1 GntR family transcriptional regulator YP_001561284.1 284785 R 398578 CDS YP_001561285.1 160895703 5745790 285656..286972 1 NC_010002.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: ajs:Ajs_1996 mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; mandelate racemase/muconate lactonizing protein 286972 5745790 Daci_0254 Delftia acidovorans SPH-1 mandelate racemase/muconate lactonizing protein YP_001561285.1 285656 D 398578 CDS YP_001561286.1 160895704 5745791 287023..288021 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_1997 uncharacterized protein UPF0065; hypothetical protein 288021 5745791 Daci_0255 Delftia acidovorans SPH-1 hypothetical protein YP_001561286.1 287023 D 398578 CDS YP_001561287.1 160895705 5745792 288195..289760 1 NC_010002.1 KEGG: ajs:Ajs_1998 galactarate dehydratase; TIGRFAM: galactarate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; galactarate dehydratase 289760 5745792 Daci_0256 Delftia acidovorans SPH-1 galactarate dehydratase YP_001561287.1 288195 D 398578 CDS YP_001561288.1 160895706 5745793 289777..290829 1 NC_010002.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: ajs:Ajs_1999 gluconolactonase; gluconolactonase 290829 5745793 Daci_0257 Delftia acidovorans SPH-1 gluconolactonase YP_001561288.1 289777 D 398578 CDS YP_001561289.1 160895707 5745794 290899..291894 1 NC_010002.1 PFAM: ribonuclease BN; KEGG: aav:Aave_0221 ribonuclease BN; ribonuclease BN 291894 5745794 Daci_0258 Delftia acidovorans SPH-1 ribonuclease BN YP_001561289.1 290899 D 398578 CDS YP_001561290.1 160895708 5745795 291965..292957 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_3911 transcriptional regulator, LysR family; LysR family transcriptional regulator 292957 5745795 Daci_0259 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001561290.1 291965 D 398578 CDS YP_001561291.1 160895709 5745796 293194..294057 1 NC_010002.1 PFAM: inner-membrane translocator; KEGG: reh:H16_B2037 ABC-type transporter, permease component: HAAT family; inner-membrane translocator 294057 5745796 Daci_0260 Delftia acidovorans SPH-1 inner-membrane translocator YP_001561291.1 293194 D 398578 CDS YP_001561292.1 160895710 5745797 294058..295032 1 NC_010002.1 PFAM: inner-membrane translocator; KEGG: reh:H16_B2038 ABC-type transporter, permease component: HAAT family; inner-membrane translocator 295032 5745797 Daci_0261 Delftia acidovorans SPH-1 inner-membrane translocator YP_001561292.1 294058 D 398578 CDS YP_001561293.1 160895711 5745798 295019..295783 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: reu:Reut_B3658 ABC transporter related; ABC transporter-like protein 295783 5745798 Daci_0262 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001561293.1 295019 D 398578 CDS YP_001561294.1 160895712 5745799 295770..296477 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: reh:H16_B2040 ABC-type transporter, ATPase component: HAAT family; ABC transporter-like protein 296477 5745799 Daci_0263 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001561294.1 295770 D 398578 CDS YP_001561295.1 160895713 5745800 296655..297830 1 NC_010002.1 PFAM: Extracellular ligand-binding receptor; KEGG: rme:Rmet_3976 extracellular ligand-binding receptor; extracellular ligand-binding receptor 297830 5745800 Daci_0264 Delftia acidovorans SPH-1 extracellular ligand-binding receptor YP_001561295.1 296655 D 398578 CDS YP_001561296.1 160895714 5745801 complement(297871..298209) 1 NC_010002.1 KEGG: xft:PD0997 hypothetical protein; hypothetical protein 298209 5745801 Daci_0265 Delftia acidovorans SPH-1 hypothetical protein YP_001561296.1 297871 R 398578 CDS YP_001561297.1 160895715 5745802 complement(298329..299102) 1 NC_010002.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rso:RSc1763 gluconate 5-dehydrogenase; short-chain dehydrogenase/reductase SDR 299102 5745802 Daci_0266 Delftia acidovorans SPH-1 short-chain dehydrogenase/reductase SDR YP_001561297.1 298329 R 398578 CDS YP_001561298.1 160895716 5745803 complement(299247..300053) 1 NC_010002.1 PFAM: regulatory protein IclR; KEGG: reh:H16_A2948 transcriptional regulator, IclR-family; IclR family transcriptional regulator 300053 5745803 Daci_0267 Delftia acidovorans SPH-1 IclR family transcriptional regulator YP_001561298.1 299247 R 398578 CDS YP_001561299.1 160895717 5745804 complement(300098..300871) 1 NC_010002.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: ajs:Ajs_0153 ferredoxin--NADP(+) reductase; oxidoreductase FAD-binding subunit 300871 5745804 Daci_0268 Delftia acidovorans SPH-1 oxidoreductase FAD-binding subunit YP_001561299.1 300098 R 398578 CDS YP_001561300.1 160895718 5745805 complement(301132..302145) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_0158 transcriptional regulator, LysR family; LysR family transcriptional regulator 302145 5745805 Daci_0269 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001561300.1 301132 R 398578 CDS YP_001561301.1 160895719 5745806 302161..302952 1 NC_010002.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ajs:Ajs_0159 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 302952 5745806 Daci_0270 Delftia acidovorans SPH-1 short-chain dehydrogenase/reductase SDR YP_001561301.1 302161 D 398578 CDS YP_001561302.1 160895720 5745807 complement(302970..303251) 1 NC_010002.1 KEGG: pfo:Pfl_0928 hypothetical protein; hypothetical protein 303251 5745807 Daci_0271 Delftia acidovorans SPH-1 hypothetical protein YP_001561302.1 302970 R 398578 CDS YP_001561303.1 160895721 5745808 complement(303248..304975) 1 NC_010002.1 PFAM: PepSY-associated TM helix domain protein; KEGG: rpb:RPB_3524 PepSY-associated TM helix; PepSY-associated TM helix domain-containing protein 304975 5745808 Daci_0272 Delftia acidovorans SPH-1 PepSY-associated TM helix domain-containing protein YP_001561303.1 303248 R 398578 CDS YP_001561304.1 160895722 5745809 complement(304972..305298) 1 NC_010002.1 KEGG: rpc:RPC_2857 hypothetical protein; hypothetical protein 305298 5745809 Daci_0273 Delftia acidovorans SPH-1 hypothetical protein YP_001561304.1 304972 R 398578 CDS YP_001561305.1 160895723 5745810 complement(305443..306303) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: vei:Veis_4138 transcriptional regulator, LysR family; LysR family transcriptional regulator 306303 5745810 Daci_0274 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001561305.1 305443 R 398578 CDS YP_001561306.1 160895724 5745811 306334..307014 1 NC_010002.1 KEGG: vei:Veis_4137 hypothetical protein; hypothetical protein 307014 5745811 Daci_0275 Delftia acidovorans SPH-1 hypothetical protein YP_001561306.1 306334 D 398578 CDS YP_001561307.1 160895725 5745812 307146..308717 1 NC_010002.1 PFAM: Rhodanese domain protein; KEGG: vei:Veis_4136 rhodanese domain protein; rhodanese domain-containing protein 308717 5745812 Daci_0276 Delftia acidovorans SPH-1 rhodanese domain-containing protein YP_001561307.1 307146 D 398578 CDS YP_001561308.1 160895726 5745813 308911..309909 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: vei:Veis_4135 uncharacterized protein UPF0065; hypothetical protein 309909 5745813 Daci_0277 Delftia acidovorans SPH-1 hypothetical protein YP_001561308.1 308911 D 398578 CDS YP_001561309.1 160895727 5745814 309909..311126 1 NC_010002.1 TIGRFAM: cystathionine beta-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: vei:Veis_4134 cystathionine beta-lyase; cystathionine beta-lyase 311126 5745814 Daci_0278 Delftia acidovorans SPH-1 cystathionine beta-lyase YP_001561309.1 309909 D 398578 CDS YP_001561310.1 160895728 5745815 complement(311140..312213) 1 NC_010002.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: reu:Reut_B5128 2-nitropropane dioxygenase, NPD; 2-nitropropane dioxygenase 312213 5745815 Daci_0279 Delftia acidovorans SPH-1 2-nitropropane dioxygenase YP_001561310.1 311140 R 398578 CDS YP_001561311.1 160895729 5745816 complement(312248..313435) 1 NC_010002.1 PFAM: protein of unknown function DUF1228; major facilitator superfamily MFS_1; KEGG: mms:mma_1602 transporter of the MFS superfamily; major facilitator transporter 313435 5745816 Daci_0280 Delftia acidovorans SPH-1 major facilitator transporter YP_001561311.1 312248 R 398578 CDS YP_001561312.1 160895730 5745817 313552..314475 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mms:mma_1603 transcriptional regulator, LysR family; LysR family transcriptional regulator 314475 5745817 Daci_0281 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001561312.1 313552 D 398578 CDS YP_001561313.1 160895731 5745818 complement(314479..315834) 1 NC_010002.1 TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein; KEGG: bam:Bamb_4540 HipA domain protein; HipA domain-containing protein 315834 5745818 Daci_0282 Delftia acidovorans SPH-1 HipA domain-containing protein YP_001561313.1 314479 R 398578 CDS YP_001561314.1 160895732 5745819 complement(315842..316141) 1 NC_010002.1 PFAM: helix-turn-helix domain protein; KEGG: bam:Bamb_4541 transcriptional regulator, XRE family; XRE family transcriptional regulator 316141 5745819 Daci_0283 Delftia acidovorans SPH-1 XRE family transcriptional regulator YP_001561314.1 315842 R 398578 CDS YP_001561315.1 160895733 5745820 complement(316313..317962) 1 NC_010002.1 KEGG: vei:Veis_3316 Mg chelatase, subunit ChlI; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; Mg chelatase subunit ChlI 317962 5745820 Daci_0284 Delftia acidovorans SPH-1 Mg chelatase subunit ChlI YP_001561315.1 316313 R 398578 CDS YP_001561316.1 160895734 5745821 complement(318129..319511) 1 NC_010002.1 KEGG: ppf:Pput_3076 hypothetical protein; hypothetical protein 319511 5745821 Daci_0285 Delftia acidovorans SPH-1 hypothetical protein YP_001561316.1 318129 R 398578 CDS YP_001561317.1 160895735 5745822 complement(319513..319938) 1 NC_010002.1 KEGG: ppf:Pput_3075 hypothetical protein; hypothetical protein 319938 5745822 Daci_0286 Delftia acidovorans SPH-1 hypothetical protein YP_001561317.1 319513 R 398578 CDS YP_001561318.1 160895736 5745823 complement(319980..321269) 1 NC_010002.1 TIGRFAM: hydroxymethylglutaryl-CoA reductase, degradative; KEGG: bch:Bcen2424_3505 hydroxymethylglutaryl-CoA reductase, degradative; hydroxymethylglutaryl-CoA reductase, degradative 321269 5745823 Daci_0287 Delftia acidovorans SPH-1 hydroxymethylglutaryl-CoA reductase, degradative YP_001561318.1 319980 R 398578 CDS YP_001561319.1 160895737 5745824 321388..322794 1 NC_010002.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bch:Bcen2424_3504 transcriptional regulator, GntR family; transcriptional regulator 322794 5745824 Daci_0288 Delftia acidovorans SPH-1 transcriptional regulator YP_001561319.1 321388 D 398578 CDS YP_001561320.1 160895738 5745825 complement(322782..323801) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B1032 transcriptional regulator, LysR family; LysR family transcriptional regulator 323801 5745825 Daci_0289 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001561320.1 322782 R 398578 CDS YP_001561321.1 160895739 5745826 323988..325301 1 NC_010002.1 PFAM: major facilitator superfamily MFS_1; KEGG: pol:Bpro_1492 major facilitator superfamily MFS_1; major facilitator transporter 325301 5745826 Daci_0290 Delftia acidovorans SPH-1 major facilitator transporter YP_001561321.1 323988 D 398578 CDS YP_001561322.1 160895740 5745827 325307..326518 1 NC_010002.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: pol:Bpro_1493 mandelate racemase/muconate lactonizing enzyme; mandelate racemase/muconate lactonizing protein 326518 5745827 Daci_0291 Delftia acidovorans SPH-1 mandelate racemase/muconate lactonizing protein YP_001561322.1 325307 D 398578 CDS YP_001561323.1 160895741 5745828 326530..327339 1 NC_010002.1 PFAM: HpcH/HpaI aldolase; KEGG: csa:Csal_2517 2-dehydro-3-deoxyglucarate aldolase; 2-dehydro-3-deoxyglucarate aldolase 327339 5745828 Daci_0292 Delftia acidovorans SPH-1 2-dehydro-3-deoxyglucarate aldolase YP_001561323.1 326530 D 398578 CDS YP_001561324.1 160895742 5745829 327356..328789 1 NC_010002.1 PFAM: Aldehyde Dehydrogenase_; KEGG: mpt:Mpe_A0361 lactaldehyde dehydrogenase; aldehyde dehydrogenase 328789 5745829 Daci_0293 Delftia acidovorans SPH-1 aldehyde dehydrogenase YP_001561324.1 327356 D 398578 CDS YP_001561325.1 160895743 5745830 complement(328811..329326) 1 NC_010002.1 PFAM: regulatory protein MarR; KEGG: aav:Aave_4468 transcriptional regulator, TrmB; MarR family transcriptional regulator 329326 5745830 Daci_0294 Delftia acidovorans SPH-1 MarR family transcriptional regulator YP_001561325.1 328811 R 398578 CDS YP_001561326.1 160895744 5745831 329429..330406 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: reh:H16_B0482 probable extra-cytoplasmic solute receptor; hypothetical protein 330406 5745831 Daci_0295 Delftia acidovorans SPH-1 hypothetical protein YP_001561326.1 329429 D 398578 CDS YP_001561327.1 160895745 5745832 330492..331820 1 NC_010002.1 PFAM: sulfatase; KEGG: aav:Aave_4466 sulfatase; sulfatase 331820 5745832 Daci_0296 Delftia acidovorans SPH-1 sulfatase YP_001561327.1 330492 D 398578 CDS YP_001561328.1 160895746 5745833 complement(331889..332752) 1 NC_010002.1 KEGG: sse:Ssed_0851 hypothetical protein; hypothetical protein 332752 5745833 Daci_0297 Delftia acidovorans SPH-1 hypothetical protein YP_001561328.1 331889 R 398578 CDS YP_001561329.1 160895747 5745834 complement(333618..333899) 1 NC_010002.1 KEGG: rso:RS06029 hypothetical protein; hypothetical protein 333899 5745834 Daci_0298 Delftia acidovorans SPH-1 hypothetical protein YP_001561329.1 333618 R 398578 CDS YP_001561330.1 160895748 5745835 complement(333949..338526) 1 NC_010002.1 TIGRFAM: YD repeat protein; PFAM: RHS protein; YD repeat-containing protein; KEGG: aav:Aave_4283 YD repeat protein; YD repeat-containing protein 338526 5745835 Daci_0299 Delftia acidovorans SPH-1 YD repeat-containing protein YP_001561330.1 333949 R 398578 CDS YP_001561331.1 160895749 5745836 complement(338605..340989) 1 NC_010002.1 TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; Gp5 domain protein; KEGG: aav:Aave_2735 rhs element Vgr protein; ImpA family type VI secretion-associated protein 340989 5745836 Daci_0300 Delftia acidovorans SPH-1 ImpA family type VI secretion-associated protein YP_001561331.1 338605 R 398578 CDS YP_001561332.1 160895750 5745837 341464..342195 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0162 hypothetical protein; hypothetical protein 342195 5745837 Daci_0301 Delftia acidovorans SPH-1 hypothetical protein YP_001561332.1 341464 D 398578 CDS YP_001561333.1 160895751 5745838 342219..342557 1 NC_010002.1 PFAM: nitrogen regulatory protein P-II; KEGG: pna:Pnap_0120 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 342557 5745838 Daci_0302 Delftia acidovorans SPH-1 nitrogen regulatory protein P-II YP_001561333.1 342219 D 398578 CDS YP_001561334.1 160895752 5745839 342589..343962 1 NC_010002.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: ajs:Ajs_0164 ammonium transporter; ammonium transporter 343962 5745839 Daci_0303 Delftia acidovorans SPH-1 ammonium transporter YP_001561334.1 342589 D 398578 CDS YP_001561335.1 160895753 5745840 344041..345309 1 NC_010002.1 PFAM: FAD linked oxidase domain protein; KEGG: vei:Veis_3312 FAD linked oxidase domain protein; FAD linked oxidase domain-containing protein 345309 5745840 Daci_0304 Delftia acidovorans SPH-1 FAD linked oxidase domain-containing protein YP_001561335.1 344041 D 398578 CDS YP_001561336.1 160895754 5745841 345335..346117 1 NC_010002.1 PFAM: protein of unknown function DUF1275; KEGG: ajs:Ajs_0167 protein of unknown function DUF1275; hypothetical protein 346117 5745841 Daci_0305 Delftia acidovorans SPH-1 hypothetical protein YP_001561336.1 345335 D 398578 CDS YP_001561337.1 160895755 5745842 346179..347429 1 NC_010002.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: ajs:Ajs_0168 protein of unknown function DUF224, cysteine-rich region domain protein; glycolate oxidase iron-sulfur subunit 347429 glcF 5745842 glcF Delftia acidovorans SPH-1 glycolate oxidase iron-sulfur subunit YP_001561337.1 346179 D 398578 CDS YP_001561338.1 160895756 5745843 347514..348380 1 NC_010002.1 PFAM: ProQ activator of osmoprotectant transporter ProP; KEGG: ajs:Ajs_0169 ProQ activator of osmoprotectant transporter ProP; ProQ activator of osmoprotectant transporter ProP 348380 5745843 Daci_0307 Delftia acidovorans SPH-1 ProQ activator of osmoprotectant transporter ProP YP_001561338.1 347514 D 398578 CDS YP_001561339.1 160895757 5745844 348610..349188 1 NC_010002.1 PFAM: AmiS/UreI transporter; KEGG: har:HEAR1450 putative transporter protein AmiS; AmiS/UreI transporter 349188 5745844 Daci_0308 Delftia acidovorans SPH-1 AmiS/UreI transporter YP_001561339.1 348610 D 398578 CDS YP_001561340.1 160895758 5745845 complement(349216..350115) 1 NC_010002.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ajs:Ajs_0174 protein of unknown function DUF6, transmembrane; hypothetical protein 350115 5745845 Daci_0309 Delftia acidovorans SPH-1 hypothetical protein YP_001561340.1 349216 R 398578 CDS YP_001561341.1 160895759 5745846 complement(350314..351615) 1 NC_010002.1 PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_0175 major facilitator superfamily MFS_1; lysophospholipid transporter LplT 351615 5745846 Daci_0310 Delftia acidovorans SPH-1 lysophospholipid transporter LplT YP_001561341.1 350314 R 398578 CDS YP_001561342.1 160895760 5745847 351750..352853 1 NC_010002.1 KEGG: ajs:Ajs_0176 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein; alanine racemase 352853 5745847 Daci_0311 Delftia acidovorans SPH-1 alanine racemase YP_001561342.1 351750 D 398578 CDS YP_001561343.1 160895761 5745848 complement(352854..353294) 1 NC_010002.1 PFAM: regulatory protein MarR; KEGG: sit:TM1040_1546 transcriptional regulator, MarR family; MarR family transcriptional regulator 353294 5745848 Daci_0312 Delftia acidovorans SPH-1 MarR family transcriptional regulator YP_001561343.1 352854 R 398578 CDS YP_001561344.1 160895762 5745849 353391..354203 1 NC_010002.1 PFAM: Siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: reh:H16_B1184 siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain-containing protein 354203 5745849 Daci_0313 Delftia acidovorans SPH-1 FAD-binding 9 siderophore-interacting domain-containing protein YP_001561344.1 353391 D 398578 CDS YP_001561345.1 160895763 5745851 354447..355877 1 NC_010002.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 355877 5745851 Daci_0314 Delftia acidovorans SPH-1 DNA repair protein RadA YP_001561345.1 354447 D 398578 CDS YP_001561346.1 160895764 5745852 355957..356394 1 NC_010002.1 KEGG: aav:Aave_0263 hypothetical protein; hypothetical protein 356394 5745852 Daci_0315 Delftia acidovorans SPH-1 hypothetical protein YP_001561346.1 355957 D 398578 CDS YP_001561347.1 160895765 5745853 356439..357377 1 NC_010002.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 357377 5745853 Daci_0316 Delftia acidovorans SPH-1 branched-chain amino acid aminotransferase YP_001561347.1 356439 D 398578 CDS YP_001561348.1 160895766 5745854 357413..357622 1 NC_010002.1 KEGG: aav:Aave_0265 hypothetical protein; hypothetical protein 357622 5745854 Daci_0317 Delftia acidovorans SPH-1 hypothetical protein YP_001561348.1 357413 D 398578 CDS YP_001561349.1 160895767 5745855 complement(357654..358598) 1 NC_010002.1 KEGG: aav:Aave_0266 hypothetical protein; hypothetical protein 358598 5745855 Daci_0318 Delftia acidovorans SPH-1 hypothetical protein YP_001561349.1 357654 R 398578 CDS YP_001561350.1 160895768 5745856 358652..359920 1 NC_010002.1 PFAM: O-antigen polymerase; KEGG: aav:Aave_0267 O-antigen polymerase; O-antigen polymerase 359920 5745856 Daci_0319 Delftia acidovorans SPH-1 O-antigen polymerase YP_001561350.1 358652 D 398578 CDS YP_001561351.1 160895769 5745857 359917..361038 1 NC_010002.1 PFAM: glycosyl transferase group 1; KEGG: ajs:Ajs_0185 glycosyl transferase, group 1; glycosyl transferase group 1 protein 361038 5745857 Daci_0320 Delftia acidovorans SPH-1 glycosyl transferase group 1 protein YP_001561351.1 359917 D 398578 CDS YP_001561352.1 160895770 5745858 361035..362063 1 NC_010002.1 PFAM: glycosyl transferase family 2; KEGG: ajs:Ajs_0186 glycosyl transferase, family 2; glycosyl transferase family protein 362063 5745858 Daci_0321 Delftia acidovorans SPH-1 glycosyl transferase family protein YP_001561352.1 361035 D 398578 CDS YP_001561353.1 160895771 5745859 362060..363013 1 NC_010002.1 KEGG: aav:Aave_0270 mannosyltransferase OCH1-related enzyme; mannosyltransferase OCH1-like enzyme 363013 5745859 Daci_0322 Delftia acidovorans SPH-1 mannosyltransferase OCH1-like enzyme YP_001561353.1 362060 D 398578 CDS YP_001561354.1 160895772 5745860 complement(363036..363455) 1 NC_010002.1 KEGG: pen:PSEEN3249 hypothetical protein; hypothetical protein 363455 5745860 Daci_0323 Delftia acidovorans SPH-1 hypothetical protein YP_001561354.1 363036 R 398578 CDS YP_001561355.1 160895773 5745861 complement(363427..364815) 1 NC_010002.1 PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN3248 transporter, MFS family; major facilitator transporter 364815 5745861 Daci_0324 Delftia acidovorans SPH-1 major facilitator transporter YP_001561355.1 363427 R 398578 CDS YP_001561356.1 160895774 5745862 364905..365816 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN3247 transcriptional regulator, LysR family; LysR family transcriptional regulator 365816 5745862 Daci_0325 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001561356.1 364905 D 398578 CDS YP_001561357.1 160895775 5745863 366191..366628 1 NC_010002.1 hypothetical protein 366628 5745863 Daci_0326 Delftia acidovorans SPH-1 hypothetical protein YP_001561357.1 366191 D 398578 CDS YP_001561358.1 160895776 5745864 complement(366644..367870) 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ajs:Ajs_0193 integral membrane sensor signal transduction histidine kinase; histidine kinase 367870 5745864 Daci_0327 Delftia acidovorans SPH-1 histidine kinase YP_001561358.1 366644 R 398578 CDS YP_001561359.1 160895777 5745865 complement(367878..368636) 1 NC_010002.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ajs:Ajs_0194 two component transcriptional regulator, winged helix family; two component transcriptional regulator 368636 5745865 Daci_0328 Delftia acidovorans SPH-1 two component transcriptional regulator YP_001561359.1 367878 R 398578 CDS YP_001561360.1 160895778 5745866 complement(368741..370177) 1 NC_010002.1 PFAM: major facilitator superfamily MFS_1; KEGG: aav:Aave_0276 major facilitator superfamily MFS_1; major facilitator transporter 370177 5745866 Daci_0329 Delftia acidovorans SPH-1 major facilitator transporter YP_001561360.1 368741 R 398578 CDS YP_001561361.1 160895779 5745867 370198..370926 1 NC_010002.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ajs:Ajs_0200 cupin 2, conserved barrel domain protein; AraC family transcriptional regulator 370926 5745867 Daci_0330 Delftia acidovorans SPH-1 AraC family transcriptional regulator YP_001561361.1 370198 D 398578 CDS YP_001561362.1 160895780 5745868 370999..371970 1 NC_010002.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ajs:Ajs_0201 protein of unknown function DUF6, transmembrane; hypothetical protein 371970 5745868 Daci_0331 Delftia acidovorans SPH-1 hypothetical protein YP_001561362.1 370999 D 398578 CDS YP_001561363.1 160895781 5745869 372016..372933 1 NC_010002.1 PFAM: peptidase M48 Ste24p; KEGG: aav:Aave_0280 peptidase M48, Ste24p; peptidase M48 Ste24p 372933 5745869 Daci_0332 Delftia acidovorans SPH-1 peptidase M48 Ste24p YP_001561363.1 372016 D 398578 CDS YP_001561364.1 160895782 5745870 complement(372944..374401) 1 NC_010002.1 PFAM: Aldehyde Dehydrogenase_; KEGG: pla:Plav_1859 aldehyde dehydrogenase; aldehyde dehydrogenase 374401 5745870 Daci_0333 Delftia acidovorans SPH-1 aldehyde dehydrogenase YP_001561364.1 372944 R 398578 CDS YP_001561365.1 160895783 5745871 complement(374517..375155) 1 NC_010002.1 PFAM: beta-lactamase domain protein; KEGG: aav:Aave_0282 beta-lactamase domain protein; beta-lactamase domain-containing protein 375155 5745871 Daci_0334 Delftia acidovorans SPH-1 beta-lactamase domain-containing protein YP_001561365.1 374517 R 398578 CDS YP_001561366.1 160895784 5745872 complement(375241..375471) 1 NC_010002.1 KEGG: sfr:Sfri_3475 hypothetical protein; hypothetical protein 375471 5745872 Daci_0335 Delftia acidovorans SPH-1 hypothetical protein YP_001561366.1 375241 R 398578 CDS YP_001561367.1 160895785 5745873 375801..376916 1 NC_010002.1 PFAM: alanine dehydrogenase/PNT domain protein; KEGG: ajs:Ajs_3954 NAD(P)(+) transhydrogenase (AB-specific); NAD(P)(+) transhydrogenase 376916 5745873 Daci_0336 Delftia acidovorans SPH-1 NAD(P)(+) transhydrogenase YP_001561367.1 375801 D 398578 CDS YP_001561368.1 160895786 5745874 376918..377262 1 NC_010002.1 KEGG: ajs:Ajs_3952 NAD(P) transhydrogenase, subunit alpha part 2; NAD(P) transhydrogenase subunit alpha part 2 377262 5745874 Daci_0337 Delftia acidovorans SPH-1 NAD(P) transhydrogenase subunit alpha part 2 YP_001561368.1 376918 D 398578 CDS YP_001561369.1 160895787 5745875 377259..378683 1 NC_010002.1 PFAM: NAD(P) transhydrogenase beta subunit; KEGG: mpt:Mpe_A3571 NAD(P) transhydrogenase, beta subunit; NAD(P)(+) transhydrogenase 378683 5745875 Daci_0338 Delftia acidovorans SPH-1 NAD(P)(+) transhydrogenase YP_001561369.1 377259 D 398578 CDS YP_001561370.1 160895788 5745876 complement(378736..379539) 1 NC_010002.1 KEGG: aav:Aave_0288 exodeoxyribonuclease III Xth; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III Xth 379539 5745876 Daci_0339 Delftia acidovorans SPH-1 exodeoxyribonuclease III Xth YP_001561370.1 378736 R 398578 CDS YP_001561371.1 160895789 5745877 379556..380251 1 NC_010002.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 380251 pyrE 5745877 pyrE Delftia acidovorans SPH-1 orotate phosphoribosyltransferase YP_001561371.1 379556 D 398578 CDS YP_001561372.1 160895790 5745878 380259..380927 1 NC_010002.1 KEGG: aav:Aave_0290 hypothetical protein; hypothetical protein 380927 5745878 Daci_0341 Delftia acidovorans SPH-1 hypothetical protein YP_001561372.1 380259 D 398578 CDS YP_001561373.1 160895791 5745879 381139..383745 1 NC_010002.1 TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; PFAM: Pyrrolo-quinoline quinone; KEGG: aav:Aave_0411 pyrrolo-quinoline quinone; PQQ-dependent dehydrogenase glucose/quinate/shikimate family protein 383745 5745879 Daci_0342 Delftia acidovorans SPH-1 PQQ-dependent dehydrogenase glucose/quinate/shikimate family protein YP_001561373.1 381139 D 398578 CDS YP_001561374.1 160895792 5745880 complement(383776..384264) 1 NC_010002.1 hypothetical protein 384264 5745880 Daci_0343 Delftia acidovorans SPH-1 hypothetical protein YP_001561374.1 383776 R 398578 CDS YP_001561375.1 160895793 5745881 384284..384499 1 NC_010002.1 hypothetical protein 384499 5745881 Daci_0344 Delftia acidovorans SPH-1 hypothetical protein YP_001561375.1 384284 D 398578 CDS YP_001561376.1 160895794 5745882 complement(384565..385203) 1 NC_010002.1 PFAM: nitroreductase; KEGG: psb:Psyr_1566 nitroreductase; nitroreductase 385203 5745882 Daci_0345 Delftia acidovorans SPH-1 nitroreductase YP_001561376.1 384565 R 398578 CDS YP_001561377.1 160895795 5745883 complement(385178..386140) 1 NC_010002.1 hypothetical protein 386140 5745883 Daci_0346 Delftia acidovorans SPH-1 hypothetical protein YP_001561377.1 385178 R 398578 CDS YP_001561378.1 160895796 5745884 386499..387728 1 NC_010002.1 PFAM: amino acid-binding ACT domain protein; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: aav:Aave_3649 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 387728 5745884 Daci_0347 Delftia acidovorans SPH-1 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_001561378.1 386499 D 398578 CDS YP_001561379.1 160895797 5745885 complement(387793..389055) 1 NC_010002.1 PFAM: CBS domain containing protein; HPP family protein?; KEGG: rsh:Rsph17029_2488 CBS domain containing protein; hypothetical protein 389055 5745885 Daci_0348 Delftia acidovorans SPH-1 hypothetical protein YP_001561379.1 387793 R 398578 CDS YP_001561380.1 160895798 5745886 complement(389093..390316) 1 NC_010002.1 PFAM: beta-lactamase; KEGG: rpb:RPB_2265 beta-lactamase; beta-lactamase 390316 5745886 Daci_0349 Delftia acidovorans SPH-1 beta-lactamase YP_001561380.1 389093 R 398578 CDS YP_001561381.1 160895799 5745887 390405..391415 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: aav:Aave_2466 uncharacterized protein UPF0065; hypothetical protein 391415 5745887 Daci_0350 Delftia acidovorans SPH-1 hypothetical protein YP_001561381.1 390405 D 398578 CDS YP_001561382.1 160895800 5745888 complement(391461..392906) 1 NC_010002.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB/Yqey domain protein; GatB region; GatB central domain protein; KEGG: ajs:Ajs_0236 glutamyl-tRNA(Gln) amidotransferase, B subunit; glutamyl-tRNA(Gln) amidotransferase subunit B 392906 5745888 Daci_0351 Delftia acidovorans SPH-1 glutamyl-tRNA(Gln) amidotransferase subunit B YP_001561382.1 391461 R 398578 CDS YP_001561383.1 160895801 5745889 complement(392913..394409) 1 NC_010002.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 394409 gatA 5745889 gatA Delftia acidovorans SPH-1 aspartyl/glutamyl-tRNA amidotransferase subunit A YP_001561383.1 392913 R 398578 CDS YP_001561384.1 160895802 5745890 complement(394462..394761) 1 NC_010002.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 394761 gatC 5745890 gatC Delftia acidovorans SPH-1 aspartyl/glutamyl-tRNA amidotransferase subunit C YP_001561384.1 394462 R 398578 CDS YP_001561385.1 160895803 5745891 394974..396017 1 NC_010002.1 functions in MreBCD complex in some organisms; rod shape-determining protein MreB 396017 5745891 Daci_0354 Delftia acidovorans SPH-1 rod shape-determining protein MreB YP_001561385.1 394974 D 398578 CDS YP_001561386.1 160895804 5745892 396202..397272 1 NC_010002.1 TIGRFAM: rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; KEGG: aav:Aave_0295 rod shape-determining protein MreC; rod shape-determining protein MreC 397272 5745892 Daci_0355 Delftia acidovorans SPH-1 rod shape-determining protein MreC YP_001561386.1 396202 D 398578 CDS YP_001561387.1 160895805 5745893 397269..397787 1 NC_010002.1 TIGRFAM: rod shape-determining protein MreD; PFAM: Rod shape-determining protein MreD; KEGG: vei:Veis_1608 putative rod shape-determining MreD transmembrane protein; rod shape-determining protein MreD 397787 5745893 Daci_0356 Delftia acidovorans SPH-1 rod shape-determining protein MreD YP_001561387.1 397269 D 398578 CDS YP_001561388.1 160895806 5745894 397801..399846 1 NC_010002.1 KEGG: ajs:Ajs_0242 peptidoglycan glycosyltransferase; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; penicillin-binding protein 2 399846 5745894 Daci_0357 Delftia acidovorans SPH-1 penicillin-binding protein 2 YP_001561388.1 397801 D 398578 CDS YP_001561389.1 160895807 5745895 complement(399915..400673) 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_0244 ABC transporter related; ABC transporter-like protein 400673 5745895 Daci_0358 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001561389.1 399915 R 398578 CDS YP_001561390.1 160895808 5745896 complement(400670..401452) 1 NC_010002.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_0245 polar amino acid ABC transporter, inner membrane subunit; polar amino acid ABC transporter inner membrane protein 401452 5745896 Daci_0359 Delftia acidovorans SPH-1 polar amino acid ABC transporter inner membrane protein YP_001561390.1 400670 R 398578 CDS YP_001561391.1 160895809 5745897 complement(401518..402288) 1 NC_010002.1 PFAM: extracellular solute-binding protein family 3; KEGG: aav:Aave_0301 extracellular solute-binding protein, family 3; extracellular solute-binding protein 402288 5745897 Daci_0360 Delftia acidovorans SPH-1 extracellular solute-binding protein YP_001561391.1 401518 R 398578 CDS YP_001561392.1 160895810 5745898 complement(402540..403298) 1 NC_010002.1 PFAM: protein of unknown function DUF81; KEGG: ajs:Ajs_0248 protein of unknown function DUF81; hypothetical protein 403298 5745898 Daci_0361 Delftia acidovorans SPH-1 hypothetical protein YP_001561392.1 402540 R 398578 CDS YP_001561393.1 160895811 5745899 complement(403596..404597) 1 NC_010002.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: reh:H16_B0517 Zn-dependent alcohol dehydrogenase; alcohol dehydrogenase 404597 5745899 Daci_0362 Delftia acidovorans SPH-1 alcohol dehydrogenase YP_001561393.1 403596 R 398578 CDS YP_001561394.1 160895812 5745900 404724..405647 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_B0516 transcriptional regulator, LysR-family; LysR family transcriptional regulator 405647 5745900 Daci_0363 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001561394.1 404724 D 398578 CDS YP_001561395.1 160895813 5745901 complement(405644..407500) 1 NC_010002.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: aav:Aave_0305 glucose-methanol-choline oxidoreductase; glucose-methanol-choline oxidoreductase 407500 5745901 Daci_0364 Delftia acidovorans SPH-1 glucose-methanol-choline oxidoreductase YP_001561395.1 405644 R 398578 CDS YP_001561396.1 160895814 5745902 407693..408823 1 NC_010002.1 PFAM: protein of unknown function DUF140; KEGG: vei:Veis_0920 protein of unknown function DUF140; hypothetical protein 408823 5745902 Daci_0365 Delftia acidovorans SPH-1 hypothetical protein YP_001561396.1 407693 D 398578 CDS YP_001561397.1 160895815 5745903 408823..409626 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_0307 ABC transporter-related protein; ABC transporter-like protein 409626 5745903 Daci_0366 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001561397.1 408823 D 398578 CDS YP_001561398.1 160895816 5745904 409826..410788 1 NC_010002.1 PFAM: Mammalian cell entry related domain protein; KEGG: vei:Veis_0922 mammalian cell entry related domain protein; hypothetical protein 410788 5745904 Daci_0367 Delftia acidovorans SPH-1 hypothetical protein YP_001561398.1 409826 D 398578 CDS YP_001561399.1 160895817 5745905 410803..411471 1 NC_010002.1 KEGG: ajs:Ajs_0253 putative lipoprotein; putative lipoprotein 411471 5745905 Daci_0368 Delftia acidovorans SPH-1 putative lipoprotein YP_001561399.1 410803 D 398578 CDS YP_001561400.1 160895818 5745906 412129..412347 1 NC_010002.1 PFAM: CsbD family protein; KEGG: aav:Aave_0312 CsbD family protein; CsbD family protein 412347 5745906 Daci_0369 Delftia acidovorans SPH-1 CsbD family protein YP_001561400.1 412129 D 398578 CDS YP_001561401.1 160895819 5745907 412492..413079 1 NC_010002.1 KEGG: ajs:Ajs_0255 hypothetical protein; hypothetical protein 413079 5745907 Daci_0370 Delftia acidovorans SPH-1 hypothetical protein YP_001561401.1 412492 D 398578 CDS YP_001561402.1 160895820 5745908 413326..413826 1 NC_010002.1 TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: pna:Pnap_1243 hemerythrin-like metal-binding protein; hemerythrin-like metal-binding protein 413826 5745908 Daci_0371 Delftia acidovorans SPH-1 hemerythrin-like metal-binding protein YP_001561402.1 413326 D 398578 CDS YP_001561403.1 160895821 5745909 complement(413870..414517) 1 NC_010002.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: aav:Aave_0319 multiple antibiotic resistance (MarC)-related protein; multiple antibiotic resistance (MarC)-like protein 414517 5745909 Daci_0372 Delftia acidovorans SPH-1 multiple antibiotic resistance (MarC)-like protein YP_001561403.1 413870 R 398578 CDS YP_001561404.1 160895822 5745910 414707..415399 1 NC_010002.1 PFAM: dienelactone hydrolase; KEGG: ajs:Ajs_0260 carboxymethylenebutenolidase; carboxymethylenebutenolidase 415399 5745910 Daci_0373 Delftia acidovorans SPH-1 carboxymethylenebutenolidase YP_001561404.1 414707 D 398578 CDS YP_001561405.1 160895823 5745911 complement(415400..415717) 1 NC_010002.1 hypothetical protein 415717 5745911 Daci_0374 Delftia acidovorans SPH-1 hypothetical protein YP_001561405.1 415400 R 398578 CDS YP_001561406.1 160895824 5745912 complement(416080..416724) 1 NC_010002.1 KEGG: pol:Bpro_1655 hypothetical protein; hypothetical protein 416724 5745912 Daci_0375 Delftia acidovorans SPH-1 hypothetical protein YP_001561406.1 416080 R 398578 CDS YP_001561407.1 160895825 5745913 complement(416721..419333) 1 NC_010002.1 KEGG: nha:Nham_3087 outer membrane autotransporter barrel; hypothetical protein 419333 5745913 Daci_0376 Delftia acidovorans SPH-1 hypothetical protein YP_001561407.1 416721 R 398578 CDS YP_001561408.1 160895826 5745914 419553..420290 1 NC_010002.1 PFAM: regulatory protein LuxR; response regulator receiver; Bacterio-opsin activator HTH domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: pna:Pnap_4084 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 420290 5745914 Daci_0377 Delftia acidovorans SPH-1 two component LuxR family transcriptional regulator YP_001561408.1 419553 D 398578 CDS YP_001561409.1 160895827 5745915 420310..422268 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; KEGG: pna:Pnap_4085 integral membrane sensor signal transduction histidine kinase; putative signal transduction histidine kinase 422268 5745915 Daci_0378 Delftia acidovorans SPH-1 putative signal transduction histidine kinase YP_001561409.1 420310 D 398578 CDS YP_001561410.1 160895828 5745916 complement(422265..423458) 1 NC_010002.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: aav:Aave_0326 Mg2+ transporter protein, CorA family protein; Mg2 transporter protein CorA family protein 423458 5745916 Daci_0379 Delftia acidovorans SPH-1 Mg2 transporter protein CorA family protein YP_001561410.1 422265 R 398578 CDS YP_001561411.1 160895829 5745917 complement(423463..424530) 1 NC_010002.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 424530 5745917 Daci_0380 Delftia acidovorans SPH-1 delta-aminolevulinic acid dehydratase YP_001561411.1 423463 R 398578 CDS YP_001561412.1 160895830 5745918 424594..425022 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0268 conserved hypothetical protein 701; hypothetical protein 425022 5745918 Daci_0381 Delftia acidovorans SPH-1 hypothetical protein YP_001561412.1 424594 D 398578 CDS YP_001561413.1 160895831 5745919 425054..426187 1 NC_010002.1 PFAM: VanZ family protein; KEGG: ajs:Ajs_0269 VanZ family protein; VanZ family protein 426187 5745919 Daci_0382 Delftia acidovorans SPH-1 VanZ family protein YP_001561413.1 425054 D 398578 CDS YP_001561414.1 160895832 5745920 426198..426572 1 NC_010002.1 KEGG: ajs:Ajs_0270 ferredoxin-like protein; ferredoxin-like protein 426572 5745920 Daci_0383 Delftia acidovorans SPH-1 ferredoxin-like protein YP_001561414.1 426198 D 398578 CDS YP_001561415.1 160895833 5745921 426653..427288 1 NC_010002.1 KEGG: ajs:Ajs_0271 putative transmembrane protein; putative transmembrane protein 427288 5745921 Daci_0384 Delftia acidovorans SPH-1 putative transmembrane protein YP_001561415.1 426653 D 398578 CDS YP_001561416.1 160895834 5745922 427381..428550 1 NC_010002.1 PFAM: beta-lactamase; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: aav:Aave_0332 serine-type D-Ala-D-Ala carboxypeptidase; serine-type D-Ala-D-Ala carboxypeptidase 428550 5745922 Daci_0385 Delftia acidovorans SPH-1 serine-type D-Ala-D-Ala carboxypeptidase YP_001561416.1 427381 D 398578 CDS YP_001561417.1 160895835 5745923 428708..429085 1 NC_010002.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 429085 rpsL 5745923 rpsL Delftia acidovorans SPH-1 30S ribosomal protein S12 YP_001561417.1 428708 D 398578 CDS YP_001561418.1 160895836 5745924 429246..429719 1 NC_010002.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 429719 5745924 Daci_0387 Delftia acidovorans SPH-1 30S ribosomal protein S7 YP_001561418.1 429246 D 398578 CDS YP_001561419.1 160895837 5745925 429868..431976 1 NC_010002.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 431976 5745925 Daci_0388 Delftia acidovorans SPH-1 elongation factor G YP_001561419.1 429868 D 398578 CDS YP_001561420.1 160895838 5745926 432152..433342 1 NC_010002.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 433342 5745926 Daci_0389 Delftia acidovorans SPH-1 elongation factor Tu YP_001561420.1 432152 D 398578 CDS YP_001561421.1 160895839 5745927 433367..433678 1 NC_010002.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 433678 rpsJ 5745927 rpsJ Delftia acidovorans SPH-1 30S ribosomal protein S10 YP_001561421.1 433367 D 398578 CDS YP_001561422.1 160895840 5745928 433889..434563 1 NC_010002.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 434563 rplC 5745928 rplC Delftia acidovorans SPH-1 50S ribosomal protein L3 YP_001561422.1 433889 D 398578 CDS YP_001561423.1 160895841 5745929 434563..435183 1 NC_010002.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 435183 rplD 5745929 rplD Delftia acidovorans SPH-1 50S ribosomal protein L4 YP_001561423.1 434563 D 398578 CDS YP_001561424.1 160895842 5745930 435180..435494 1 NC_010002.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 435494 rplW 5745930 rplW Delftia acidovorans SPH-1 50S ribosomal protein L23 YP_001561424.1 435180 D 398578 CDS YP_001561425.1 160895843 5745931 435497..436321 1 NC_010002.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 436321 rplB 5745931 rplB Delftia acidovorans SPH-1 50S ribosomal protein L2 YP_001561425.1 435497 D 398578 CDS YP_001561426.1 160895844 5745932 436332..436607 1 NC_010002.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 436607 rpsS 5745932 rpsS Delftia acidovorans SPH-1 30S ribosomal protein S19 YP_001561426.1 436332 D 398578 CDS YP_001561427.1 160895845 5745933 436618..436950 1 NC_010002.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 436950 rplV 5745933 rplV Delftia acidovorans SPH-1 50S ribosomal protein L22 YP_001561427.1 436618 D 398578 CDS YP_001561428.1 160895846 5745934 436967..437839 1 NC_010002.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 437839 rpsC 5745934 rpsC Delftia acidovorans SPH-1 30S ribosomal protein S3 YP_001561428.1 436967 D 398578 CDS YP_001561429.1 160895847 5745935 437842..438258 1 NC_010002.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 438258 rplP 5745935 rplP Delftia acidovorans SPH-1 50S ribosomal protein L16 YP_001561429.1 437842 D 398578 CDS YP_001561430.1 160895848 5745936 438269..438466 1 NC_010002.1 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 438466 5745936 Daci_0399 Delftia acidovorans SPH-1 50S ribosomal protein L29 YP_001561430.1 438269 D 398578 CDS YP_001561431.1 160895849 5745937 438480..438749 1 NC_010002.1 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 438749 rpsQ 5745937 rpsQ Delftia acidovorans SPH-1 30S ribosomal protein S17 YP_001561431.1 438480 D 398578 CDS YP_001561432.1 160895850 5745938 438796..439374 1 NC_010002.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: ajs:Ajs_0288 redoxin domain protein; redoxin domain-containing protein 439374 5745938 Daci_0401 Delftia acidovorans SPH-1 redoxin domain-containing protein YP_001561432.1 438796 D 398578 CDS YP_001561433.1 160895851 5745939 complement(439486..440076) 1 NC_010002.1 PFAM: GCN5-related N-acetyltransferase; KEGG: aav:Aave_0349 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 440076 5745939 Daci_0402 Delftia acidovorans SPH-1 N-acetyltransferase GCN5 YP_001561433.1 439486 R 398578 CDS YP_001561434.1 160895852 5745940 complement(440043..440801) 1 NC_010002.1 PFAM: cytochrome B561; KEGG: ajs:Ajs_0290 cytochrome b561; cytochrome B561 440801 5745940 Daci_0403 Delftia acidovorans SPH-1 cytochrome B561 YP_001561434.1 440043 R 398578 CDS YP_001561435.1 160895853 5745941 440966..441376 1 NC_010002.1 PFAM: cytochrome c prime; KEGG: ajs:Ajs_0291 cytochrome c, class II; cytochrome c prime 441376 5745941 Daci_0404 Delftia acidovorans SPH-1 cytochrome c prime YP_001561435.1 440966 D 398578 CDS YP_001561436.1 160895854 5745942 complement(441449..442060) 1 NC_010002.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: aav:Aave_0350 redoxin domain protein; redoxin domain-containing protein 442060 5745942 Daci_0405 Delftia acidovorans SPH-1 redoxin domain-containing protein YP_001561436.1 441449 R 398578 CDS YP_001561437.1 160895855 5745943 442076..442693 1 NC_010002.1 KEGG: ajs:Ajs_0293 hypothetical protein; hypothetical protein 442693 5745943 Daci_0406 Delftia acidovorans SPH-1 hypothetical protein YP_001561437.1 442076 D 398578 CDS YP_001561438.1 160895856 5745944 442741..443280 1 NC_010002.1 PFAM: PTS system fructose subfamily IIA component; KEGG: ajs:Ajs_0295 PTS system fructose subfamily IIA component; PTS system fructose subfamily transporter subunit IIA 443280 5745944 Daci_0407 Delftia acidovorans SPH-1 PTS system fructose subfamily transporter subunit IIA YP_001561438.1 442741 D 398578 CDS YP_001561439.1 160895857 5745945 443249..443518 1 NC_010002.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: aav:Aave_0353 phosphotransferase system, phosphocarrier protein HPr; phosphotransferase system, phosphocarrier protein HPr 443518 5745945 Daci_0408 Delftia acidovorans SPH-1 phosphotransferase system, phosphocarrier protein HPr YP_001561439.1 443249 D 398578 CDS YP_001561440.1 160895858 5745946 443636..445411 1 NC_010002.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: aav:Aave_0354 phosphoenolpyruvate-protein phosphotransferase; phosphoenolpyruvate-protein phosphotransferase 445411 5745946 Daci_0409 Delftia acidovorans SPH-1 phosphoenolpyruvate-protein phosphotransferase YP_001561440.1 443636 D 398578 CDS YP_001561441.1 160895859 5745947 complement(445806..446786) 1 NC_010002.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 446786 5745947 Daci_0410 Delftia acidovorans SPH-1 lipoyl synthase YP_001561441.1 445806 R 398578 CDS YP_001561442.1 160895860 5745948 complement(446797..447522) 1 NC_010002.1 lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; lipoate-protein ligase B 447522 5745948 Daci_0411 Delftia acidovorans SPH-1 lipoate-protein ligase B YP_001561442.1 446797 R 398578 CDS YP_001561443.1 160895861 5745949 complement(447519..447836) 1 NC_010002.1 PFAM: protein of unknown function DUF493; KEGG: aav:Aave_0364 protein of unknown function DUF493; hypothetical protein 447836 5745949 Daci_0412 Delftia acidovorans SPH-1 hypothetical protein YP_001561443.1 447519 R 398578 CDS YP_001561444.1 160895862 5745950 448122..448604 1 NC_010002.1 KEGG: ajs:Ajs_0301 putative ATP synthase protein I; putative ATP synthase protein I 448604 5745950 Daci_0413 Delftia acidovorans SPH-1 putative ATP synthase protein I YP_001561444.1 448122 D 398578 CDS YP_001561445.1 160895863 5745951 448626..449489 1 NC_010002.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 449489 5745951 Daci_0414 Delftia acidovorans SPH-1 F0F1 ATP synthase subunit A YP_001561445.1 448626 D 398578 CDS YP_001561446.1 160895864 5745952 449541..449789 1 NC_010002.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 449789 5745952 Daci_0415 Delftia acidovorans SPH-1 F0F1 ATP synthase subunit C YP_001561446.1 449541 D 398578 CDS YP_001561447.1 160895865 5745953 449825..450295 1 NC_010002.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B 450295 5745953 Daci_0416 Delftia acidovorans SPH-1 F0F1 ATP synthase subunit B YP_001561447.1 449825 D 398578 CDS YP_001561448.1 160895866 5745954 450308..450847 1 NC_010002.1 Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta 450847 5745954 Daci_0417 Delftia acidovorans SPH-1 F0F1 ATP synthase subunit delta YP_001561448.1 450308 D 398578 CDS YP_001561449.1 160895867 5745955 450896..452449 1 NC_010002.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 452449 5745955 Daci_0418 Delftia acidovorans SPH-1 F0F1 ATP synthase subunit alpha YP_001561449.1 450896 D 398578 CDS YP_001561450.1 160895868 5745956 452468..453340 1 NC_010002.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 453340 5745956 Daci_0419 Delftia acidovorans SPH-1 F0F1 ATP synthase subunit gamma YP_001561450.1 452468 D 398578 CDS YP_001561451.1 160895869 5745957 453375..454784 1 NC_010002.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 454784 5745957 Daci_0420 Delftia acidovorans SPH-1 F0F1 ATP synthase subunit beta YP_001561451.1 453375 D 398578 CDS YP_001561452.1 160895870 5745958 454945..455361 1 NC_010002.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon 455361 atpC 5745958 atpC Delftia acidovorans SPH-1 F0F1 ATP synthase subunit epsilon YP_001561452.1 454945 D 398578 CDS YP_001561453.1 160895871 5745959 complement(455427..455687) 1 NC_010002.1 hypothetical protein 455687 5745959 Daci_0422 Delftia acidovorans SPH-1 hypothetical protein YP_001561453.1 455427 R 398578 CDS YP_001561454.1 160895872 5745960 complement(455796..456338) 1 NC_010002.1 PFAM: protein of unknown function DUF477; KEGG: aav:Aave_0379 protein of unknown function DUF477; hypothetical protein 456338 5745960 Daci_0423 Delftia acidovorans SPH-1 hypothetical protein YP_001561454.1 455796 R 398578 CDS YP_001561455.1 160895873 5745961 complement(456340..457212) 1 NC_010002.1 PFAM: protein of unknown function DUF477; KEGG: ajs:Ajs_0315 protein of unknown function DUF477; hypothetical protein 457212 5745961 Daci_0424 Delftia acidovorans SPH-1 hypothetical protein YP_001561455.1 456340 R 398578 CDS YP_001561456.1 160895874 5745962 complement(457246..457833) 1 NC_010002.1 PFAM: LemA family protein; KEGG: aav:Aave_0381 LemA family protein; LemA family protein 457833 5745962 Daci_0425 Delftia acidovorans SPH-1 LemA family protein YP_001561456.1 457246 R 398578 CDS YP_001561457.1 160895875 5745963 457982..458968 1 NC_010002.1 KEGG: aav:Aave_0383 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 458968 5745963 Daci_0426 Delftia acidovorans SPH-1 alpha/beta hydrolase fold protein YP_001561457.1 457982 D 398578 CDS YP_001561458.1 160895876 5745964 458974..459525 1 NC_010002.1 KEGG: pna:Pnap_0262 hypothetical protein; hypothetical protein 459525 5745964 Daci_0427 Delftia acidovorans SPH-1 hypothetical protein YP_001561458.1 458974 D 398578 CDS YP_001561459.1 160895877 5745965 complement(459805..460050) 1 NC_010002.1 KEGG: rme:Rmet_1560 hypothetical protein; hypothetical protein 460050 5745965 Daci_0428 Delftia acidovorans SPH-1 hypothetical protein YP_001561459.1 459805 R 398578 CDS YP_001561460.1 160895878 5745966 complement(460047..461321) 1 NC_010002.1 PFAM: conjugation TrbI family protein; KEGG: rme:Rmet_1559 conjugation TrbI-like protein; conjugation TrbI family protein 461321 5745966 Daci_0429 Delftia acidovorans SPH-1 conjugation TrbI family protein YP_001561460.1 460047 R 398578 CDS YP_001561461.1 160895879 5745967 complement(461324..462313) 1 NC_010002.1 TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: pau:PA14_30860 TrbG-like protein; P-type conjugative transfer protein TrbG 462313 5745967 Daci_0430 Delftia acidovorans SPH-1 P-type conjugative transfer protein TrbG YP_001561461.1 461324 R 398578 CDS YP_001561462.1 160895880 5745968 complement(462310..463014) 1 NC_010002.1 PFAM: Conjugal transfer protein; KEGG: ajs:Ajs_2904 conjugal transfer protein; conjugal transfer protein TrbF 463014 5745968 Daci_0431 Delftia acidovorans SPH-1 conjugal transfer protein TrbF YP_001561462.1 462310 R 398578 CDS YP_001561463.1 160895881 5745969 complement(463033..464406) 1 NC_010002.1 type IV secretion VirB6 family; conjugal transfer protein TrbL 464406 5745969 Daci_0432 Delftia acidovorans SPH-1 conjugal transfer protein TrbL YP_001561463.1 463033 R 398578 CDS YP_001561464.1 160895882 5745970 complement(464403..464702) 1 NC_010002.1 KEGG: ajs:Ajs_2906 putative lipoprotein; putative lipoprotein 464702 5745970 Daci_0433 Delftia acidovorans SPH-1 putative lipoprotein YP_001561464.1 464403 R 398578 CDS YP_001561465.1 160895883 5745971 complement(464715..465440) 1 NC_010002.1 TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: pau:PA14_30900 TrbJ-like protein; conjugal transfer protein TrbJ 465440 5745971 Daci_0434 Delftia acidovorans SPH-1 conjugal transfer protein TrbJ YP_001561465.1 464715 R 398578 CDS YP_001561466.1 160895884 5745972 complement(465437..467890) 1 NC_010002.1 type IV secretion system VirB4 family; conjugal transfer ATPase TrbE 467890 5745972 Daci_0435 Delftia acidovorans SPH-1 conjugal transfer ATPase TrbE YP_001561466.1 465437 R 398578 CDS YP_001561467.1 160895885 5745973 complement(467906..468178) 1 NC_010002.1 KEGG: rme:Rmet_1552 putative conjugal transfer TrbD transmembrane protein; putative conjugal transfer TrbD transmembrane protein 468178 5745973 Daci_0436 Delftia acidovorans SPH-1 putative conjugal transfer TrbD transmembrane protein YP_001561467.1 467906 R 398578 CDS YP_001561468.1 160895886 5745974 complement(468175..468558) 1 NC_010002.1 PFAM: Conjugal transfer protein TrbC; KEGG: rme:Rmet_1551 conjugal transfer protein TrbC; conjugal transfer protein TrbC 468558 5745974 Daci_0437 Delftia acidovorans SPH-1 conjugal transfer protein TrbC YP_001561468.1 468175 R 398578 CDS YP_001561469.1 160895887 5745975 complement(468555..469616) 1 NC_010002.1 TIGRFAM: P-type conjugative transfer ATPase TrbB; PFAM: type II secretion system protein E; KEGG: rme:Rmet_1550 type II secretion system protein E; P-type conjugative transfer ATPase TrbB 469616 5745975 Daci_0438 Delftia acidovorans SPH-1 P-type conjugative transfer ATPase TrbB YP_001561469.1 468555 R 398578 CDS YP_001561470.1 160895888 5745976 complement(469613..470077) 1 NC_010002.1 PFAM: CopG domain protein DNA-binding domain protein; KEGG: pau:PA14_30950 hypothetical protein; CopG/DNA-binding domain-containing protein 470077 5745976 Daci_0439 Delftia acidovorans SPH-1 CopG/DNA-binding domain-containing protein YP_001561470.1 469613 R 398578 CDS YP_001561471.1 160895889 5745977 complement(470074..472095) 1 NC_010002.1 type IV secretion VirD4 coupling protein family; conjugal transfer coupling protein TraG 472095 5745977 Daci_0440 Delftia acidovorans SPH-1 conjugal transfer coupling protein TraG YP_001561471.1 470074 R 398578 CDS YP_001561472.1 160895890 5745978 complement(472313..472531) 1 NC_010002.1 KEGG: bte:BTH_I0809 hypothetical protein; hypothetical protein 472531 5745978 Daci_0441 Delftia acidovorans SPH-1 hypothetical protein YP_001561472.1 472313 R 398578 CDS YP_001561473.1 160895891 5745979 complement(472554..473480) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: shn:Shewana3_1278 transcriptional regulator, LysR family; LysR family transcriptional regulator 473480 5745979 Daci_0442 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001561473.1 472554 R 398578 CDS YP_001561474.1 160895892 5745980 complement(473628..473867) 1 NC_010002.1 KEGG: ajs:Ajs_2717 hypothetical protein; hypothetical protein 473867 5745980 Daci_0443 Delftia acidovorans SPH-1 hypothetical protein YP_001561474.1 473628 R 398578 CDS YP_001561475.1 160895893 5745981 complement(474041..474967) 1 NC_010002.1 PFAM: copper resistance D domain protein; KEGG: rso:RSp0659 probable copper resistance D transmembrane protein; copper resistance D domain-containing protein 474967 5745981 Daci_0444 Delftia acidovorans SPH-1 copper resistance D domain-containing protein YP_001561475.1 474041 R 398578 CDS YP_001561476.1 160895894 5745982 complement(474972..475358) 1 NC_010002.1 PFAM: copper resistance protein CopC; KEGG: rme:Rmet_6114 copper resistance protein CopC; copper resistance protein CopC 475358 5745982 Daci_0445 Delftia acidovorans SPH-1 copper resistance protein CopC YP_001561476.1 474972 R 398578 CDS YP_001561477.1 160895895 5745983 complement(475500..477980) 1 NC_010002.1 KEGG: neu:NE1216 haloacid dehalogenase/epoxide hydrolase family:E1-E2 ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; YHS domain protein; E1-E2 ATPase-associated domain protein; SMART: TRASH domain protein; heavy metal translocating P-type ATPase 477980 5745983 Daci_0446 Delftia acidovorans SPH-1 heavy metal translocating P-type ATPase YP_001561477.1 475500 R 398578 CDS YP_001561478.1 160895896 5745984 complement(478093..478365) 1 NC_010002.1 KEGG: pna:Pnap_4518 hypothetical protein; hypothetical protein 478365 5745984 Daci_0447 Delftia acidovorans SPH-1 hypothetical protein YP_001561478.1 478093 R 398578 CDS YP_001561479.1 160895897 5745985 complement(478399..478884) 1 NC_010002.1 PFAM: protein of unknown function DUF411; KEGG: pna:Pnap_1259 protein of unknown function DUF411; hypothetical protein 478884 5745985 Daci_0448 Delftia acidovorans SPH-1 hypothetical protein YP_001561479.1 478399 R 398578 CDS YP_001561480.1 160895898 5745986 complement(478922..479902) 1 NC_010002.1 PFAM: copper resistance B precursor; KEGG: ajs:Ajs_1234 copper resistance B precursor; copper resistance B 479902 5745986 Daci_0449 Delftia acidovorans SPH-1 copper resistance B YP_001561480.1 478922 R 398578 CDS YP_001561481.1 160895899 5745987 complement(479928..481829) 1 NC_010002.1 TIGRFAM: copper-resistance protein, CopA family; PFAM: multicopper oxidase type 1; multicopper oxidase type 2; multicopper oxidase type 3; KEGG: ajs:Ajs_1235 copper-resistance protein, CopA family; CopA family copper resistance protein 481829 5745987 Daci_0450 Delftia acidovorans SPH-1 CopA family copper resistance protein YP_001561481.1 479928 R 398578 CDS YP_001561482.1 160895900 5745988 482085..482777 1 NC_010002.1 TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ajs:Ajs_1236 two component heavy metal response transcriptional regulator, winged helix family; two component heavy metal response transcriptional regulator 482777 5745988 Daci_0451 Delftia acidovorans SPH-1 two component heavy metal response transcriptional regulator YP_001561482.1 482085 D 398578 CDS YP_001561483.1 160895901 5745989 482749..484182 1 NC_010002.1 TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: har:HEAR0537 sensory histidine kinase in two-component regulatory system with CusR, regulation of copper resistance, senses copper ions; heavy metal sensor signal transduction histidine kinase 484182 5745989 Daci_0452 Delftia acidovorans SPH-1 heavy metal sensor signal transduction histidine kinase YP_001561483.1 482749 D 398578 CDS YP_001561484.1 160895902 5745990 complement(484259..486295) 1 NC_010002.1 KEGG: rme:Rmet_1489 hypothetical protein; hypothetical protein 486295 5745990 Daci_0453 Delftia acidovorans SPH-1 hypothetical protein YP_001561484.1 484259 R 398578 CDS YP_001561485.1 160895903 5745991 complement(486690..487277) 1 NC_010002.1 KEGG: rme:Rmet_1258 putative conjugal transfer TRAF transmembrane protein; putative conjugal transfer TRAF transmembrane protein 487277 5745991 Daci_0454 Delftia acidovorans SPH-1 putative conjugal transfer TRAF transmembrane protein YP_001561485.1 486690 R 398578 CDS YP_001561486.1 160895904 5745992 complement(487274..487831) 1 NC_010002.1 KEGG: rme:Rmet_1487 hypothetical protein; hypothetical protein 487831 5745992 Daci_0455 Delftia acidovorans SPH-1 hypothetical protein YP_001561486.1 487274 R 398578 CDS YP_001561487.1 160895905 5745993 complement(487828..488103) 1 NC_010002.1 KEGG: aav:Aave_0688 hypothetical protein; hypothetical protein 488103 5745993 Daci_0456 Delftia acidovorans SPH-1 hypothetical protein YP_001561487.1 487828 R 398578 CDS YP_001561488.1 160895906 5745994 complement(488100..488738) 1 NC_010002.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: rme:Rmet_3023 cobyrinic acid a,c-diamide synthase; cobyrinic acid ac-diamide synthase 488738 5745994 Daci_0457 Delftia acidovorans SPH-1 cobyrinic acid ac-diamide synthase YP_001561488.1 488100 R 398578 CDS YP_001561489.1 160895907 5745995 complement(488992..489849) 1 NC_010002.1 KEGG: ajs:Ajs_2933 conserved hypothetical replication initiator and transcription repressor protein; putative replication initiator and transcription repressor protein 489849 5745995 Daci_0458 Delftia acidovorans SPH-1 putative replication initiator and transcription repressor protein YP_001561489.1 488992 R 398578 CDS YP_001561490.1 160895908 5745996 complement(490250..491023) 1 NC_010002.1 KEGG: ajs:Ajs_2651 hypothetical protein; hypothetical protein 491023 5745996 Daci_0459 Delftia acidovorans SPH-1 hypothetical protein YP_001561490.1 490250 R 398578 CDS YP_001561491.1 160895909 5745997 complement(491367..491714) 1 NC_010002.1 KEGG: rme:Rmet_1482 putative lipoprotein; putative lipoprotein 491714 5745997 Daci_0460 Delftia acidovorans SPH-1 putative lipoprotein YP_001561491.1 491367 R 398578 CDS YP_001561492.1 160895910 5745998 491931..492224 1 NC_010002.1 PFAM: helix-turn-helix domain protein; KEGG: rme:Rmet_1481 transcriptional regulator, XRE family; XRE family transcriptional regulator 492224 5745998 Daci_0461 Delftia acidovorans SPH-1 XRE family transcriptional regulator YP_001561492.1 491931 D 398578 CDS YP_001561493.1 160895911 5745999 complement(492589..493620) 1 NC_010002.1 PFAM: protein of unknown function DUF736; KEGG: pau:PA14_31180 hypothetical protein; hypothetical protein 493620 5745999 Daci_0462 Delftia acidovorans SPH-1 hypothetical protein YP_001561493.1 492589 R 398578 CDS YP_001561494.1 160895912 5746000 complement(493694..494086) 1 NC_010002.1 PFAM: protein of unknown function DUF1232; KEGG: bbr:BB1021 hypothetical protein; hypothetical protein 494086 5746000 Daci_0463 Delftia acidovorans SPH-1 hypothetical protein YP_001561494.1 493694 R 398578 CDS YP_001561495.1 160895913 5746001 complement(494083..495036) 1 NC_010002.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: pde:Pden_3353 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter 495036 5746001 Daci_0464 Delftia acidovorans SPH-1 cation diffusion facilitator family transporter YP_001561495.1 494083 R 398578 CDS YP_001561496.1 160895914 5746002 complement(495083..495355) 1 NC_010002.1 PFAM: protein of unknown function DUF156; KEGG: pde:Pden_3352 protein of unknown function DUF156; hypothetical protein 495355 5746002 Daci_0465 Delftia acidovorans SPH-1 hypothetical protein YP_001561496.1 495083 R 398578 CDS YP_001561497.1 160895915 5746003 complement(495616..495825) 1 NC_010002.1 KEGG: rme:Rmet_3032 hypothetical protein; hypothetical protein 495825 5746003 Daci_0466 Delftia acidovorans SPH-1 hypothetical protein YP_001561497.1 495616 R 398578 CDS YP_001561498.1 160895916 5746004 complement(495889..497952) 1 NC_010002.1 PFAM: ParB domain protein nuclease; KEGG: rme:Rmet_3033 ParB-like nuclease; nuclease 497952 5746004 Daci_0467 Delftia acidovorans SPH-1 nuclease YP_001561498.1 495889 R 398578 CDS YP_001561499.1 160895917 5746005 complement(498017..498841) 1 NC_010002.1 PFAM: protein of unknown function DUF932; KEGG: ajs:Ajs_2944 protein of unknown function DUF932; hypothetical protein 498841 5746005 Daci_0468 Delftia acidovorans SPH-1 hypothetical protein YP_001561499.1 498017 R 398578 CDS YP_001561500.1 160895918 5746006 complement(499552..499830) 1 NC_010002.1 KEGG: pau:PA14_31220 hypothetical protein; hypothetical protein 499830 5746006 Daci_0469 Delftia acidovorans SPH-1 hypothetical protein YP_001561500.1 499552 R 398578 CDS YP_001561501.1 160895919 5746007 complement(499896..500246) 1 NC_010002.1 KEGG: rme:Rmet_3038 hypothetical protein; hypothetical protein 500246 5746007 Daci_0470 Delftia acidovorans SPH-1 hypothetical protein YP_001561501.1 499896 R 398578 CDS YP_001561502.1 160895920 5746008 complement(500712..501149) 1 NC_010002.1 KEGG: pol:Bpro_3490 hypothetical protein; hypothetical protein 501149 5746008 Daci_0471 Delftia acidovorans SPH-1 hypothetical protein YP_001561502.1 500712 R 398578 CDS YP_001561503.1 160895921 5746009 complement(501257..501673) 1 NC_010002.1 hypothetical protein 501673 5746009 Daci_0472 Delftia acidovorans SPH-1 hypothetical protein YP_001561503.1 501257 R 398578 CDS YP_001561504.1 160895922 5746010 complement(501982..505152) 1 NC_010002.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: pol:Bpro_3491 heavy metal efflux pump CzcA; CzcA family heavy metal efflux protein 505152 5746010 Daci_0473 Delftia acidovorans SPH-1 CzcA family heavy metal efflux protein YP_001561504.1 501982 R 398578 CDS YP_001561505.1 160895923 5746011 complement(505149..506786) 1 NC_010002.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pol:Bpro_3492 secretion protein HlyD; RND family efflux transporter MFP subunit 506786 5746011 Daci_0474 Delftia acidovorans SPH-1 RND family efflux transporter MFP subunit YP_001561505.1 505149 R 398578 CDS YP_001561506.1 160895924 5746012 complement(506807..508120) 1 NC_010002.1 KEGG: mpt:Mpe_A1625 putative outer membrane cation efflux protein; putative outer membrane cation efflux protein 508120 5746012 Daci_0475 Delftia acidovorans SPH-1 putative outer membrane cation efflux protein YP_001561506.1 506807 R 398578 CDS YP_001561507.1 160895925 5746013 complement(508255..508728) 1 NC_010002.1 KEGG: rme:Rmet_5030 hypothetical protein; hypothetical protein 508728 5746013 Daci_0476 Delftia acidovorans SPH-1 hypothetical protein YP_001561507.1 508255 R 398578 CDS YP_001561508.1 160895926 5746014 complement(508725..509246) 1 NC_010002.1 PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: azo:azo1354 putative regulatory protein; MerR family transcriptional regulator 509246 5746014 Daci_0477 Delftia acidovorans SPH-1 MerR family transcriptional regulator YP_001561508.1 508725 R 398578 CDS YP_001561509.1 160895927 5746015 complement(509410..509850) 1 NC_010002.1 TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: vei:Veis_2831 putative transcriptional regulator, MerR family; MerR family transcriptional regulator 509850 5746015 Daci_0478 Delftia acidovorans SPH-1 MerR family transcriptional regulator YP_001561509.1 509410 R 398578 CDS YP_001561510.1 160895928 5746016 510137..512956 1 NC_010002.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: pla:Plav_3390 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase 512956 5746016 Daci_0479 Delftia acidovorans SPH-1 heavy metal translocating P-type ATPase YP_001561510.1 510137 D 398578 CDS YP_001561511.1 160895929 5746017 512973..513452 1 NC_010002.1 TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II; KEGG: pla:Plav_3391 lipoprotein signal peptidase; lipoprotein signal peptidase 513452 5746017 Daci_0480 Delftia acidovorans SPH-1 lipoprotein signal peptidase YP_001561511.1 512973 D 398578 CDS YP_001561512.1 160895930 5746018 513540..514343 1 NC_010002.1 KEGG: cvi:CV_1327 undecaprenyl-diphosphatase; TIGRFAM: undecaprenol kinase; PFAM: Bacitracin resistance protein BacA; undecaprenol kinase 514343 5746018 Daci_0481 Delftia acidovorans SPH-1 undecaprenol kinase YP_001561512.1 513540 D 398578 CDS YP_001561513.1 160895931 5746019 514575..516524 1 NC_010002.1 PFAM: cytochrome c class I; iron permease FTR1; KEGG: ajs:Ajs_1240 iron permease FTR1; iron permease FTR1 516524 5746019 Daci_0482 Delftia acidovorans SPH-1 iron permease FTR1 YP_001561513.1 514575 D 398578 CDS YP_001561514.1 160895932 5746020 complement(516588..518276) 1 NC_010002.1 TIGRFAM: mercuric reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; Heavy metal transport/detoxification protein; KEGG: ajs:Ajs_1298 mercuric reductase; putative mercuric reductase 518276 5746020 Daci_0483 Delftia acidovorans SPH-1 putative mercuric reductase YP_001561514.1 516588 R 398578 CDS YP_001561515.1 160895933 5746021 complement(518288..518566) 1 NC_010002.1 TIGRFAM: mercuric transport protein periplasmic component; PFAM: Heavy metal transport/detoxification protein; KEGG: ajs:Ajs_1299 mercuric transport protein periplasmic component; mercuric transport protein periplasmic protein 518566 5746021 Daci_0484 Delftia acidovorans SPH-1 mercuric transport protein periplasmic protein YP_001561515.1 518288 R 398578 CDS YP_001561516.1 160895934 5746022 complement(518579..518929) 1 NC_010002.1 PFAM: Mercuric transport protein MerT; KEGG: ajs:Ajs_1300 mercuric transport protein MerT; putative mercuric transport protein 518929 5746022 Daci_0485 Delftia acidovorans SPH-1 putative mercuric transport protein YP_001561516.1 518579 R 398578 CDS YP_001561517.1 160895935 5746023 519001..519408 1 NC_010002.1 TIGRFAM: Hg(II)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: ajs:Ajs_1301 putative transcriptional regulator, MerR family; MerR family transcriptional regulator 519408 5746023 Daci_0486 Delftia acidovorans SPH-1 MerR family transcriptional regulator YP_001561517.1 519001 D 398578 CDS YP_001561518.1 160895936 5746024 519566..519913 1 NC_010002.1 SMART: regulatory protein ArsR; KEGG: mpt:Mpe_A2347 TC repressor; ArsR family transcriptional regulator 519913 5746024 Daci_0487 Delftia acidovorans SPH-1 ArsR family transcriptional regulator YP_001561518.1 519566 D 398578 CDS YP_001561519.1 160895937 5746025 519926..520396 1 NC_010002.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mpt:Mpe_A2346 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 520396 5746025 Daci_0488 Delftia acidovorans SPH-1 glyoxalase/bleomycin resistance protein/dioxygenase YP_001561519.1 519926 D 398578 CDS YP_001561520.1 160895938 5746026 520409..520906 1 NC_010002.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: mpt:Mpe_A2345 arsenate reductase, putative; protein tyrosine phosphatase 520906 5746026 Daci_0489 Delftia acidovorans SPH-1 protein tyrosine phosphatase YP_001561520.1 520409 D 398578 CDS YP_001561521.1 160895939 5746027 520917..522002 1 NC_010002.1 TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: har:HEAR1962 arsenite efflux pump ACR3; arsenical-resistance protein 522002 5746027 Daci_0490 Delftia acidovorans SPH-1 arsenical-resistance protein YP_001561521.1 520917 D 398578 CDS YP_001561522.1 160895940 5746028 522017..522439 1 NC_010002.1 TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: har:HEAR1960 arsenate reductase (glutaredoxin); arsenate reductase 522439 5746028 Daci_0491 Delftia acidovorans SPH-1 arsenate reductase YP_001561522.1 522017 D 398578 CDS YP_001561523.1 160895941 5746029 522432..523154 1 NC_010002.1 TIGRFAM: arsenical resistance protein ArsH; PFAM: NADPH-dependent FMN reductase; KEGG: ajs:Ajs_1284 NADPH-dependent FMN reductase; arsenical resistance protein ArsH 523154 5746029 Daci_0492 Delftia acidovorans SPH-1 arsenical resistance protein ArsH YP_001561523.1 522432 D 398578 CDS YP_001561524.1 160895942 5746030 523250..523681 1 NC_010002.1 hypothetical protein 523681 5746030 Daci_0493 Delftia acidovorans SPH-1 hypothetical protein YP_001561524.1 523250 D 398578 CDS YP_001561525.1 160895943 5746031 complement(523720..523911) 1 NC_010002.1 KEGG: ajs:Ajs_2957 putative transcriptional regulator; hypothetical protein 523911 5746031 Daci_0494 Delftia acidovorans SPH-1 hypothetical protein YP_001561525.1 523720 R 398578 CDS YP_001561526.1 160895944 5746032 complement(523911..524435) 1 NC_010002.1 KEGG: rme:Rmet_1467 prophage CP4-57 regulatory; prophage CP4-57 regulatory 524435 5746032 Daci_0495 Delftia acidovorans SPH-1 prophage CP4-57 regulatory YP_001561526.1 523911 R 398578 CDS YP_001561527.1 160895945 5746033 complement(524440..524718) 1 NC_010002.1 KEGG: rme:Rmet_1466 hypothetical protein; hypothetical protein 524718 5746033 Daci_0496 Delftia acidovorans SPH-1 hypothetical protein YP_001561527.1 524440 R 398578 CDS YP_001561528.1 160895946 5746034 complement(524894..526132) 1 NC_010002.1 PFAM: integrase family protein; KEGG: rme:Rmet_3045 phage integrase; integrase family protein 526132 5746034 Daci_0497 Delftia acidovorans SPH-1 integrase family protein YP_001561528.1 524894 R 398578 CDS YP_001561529.1 160895947 5746035 complement(526318..526860) 1 NC_010002.1 PFAM: cytochrome c class I; KEGG: aav:Aave_0385 cytochrome c, class I; class I cytochrome c 526860 5746035 Daci_0498 Delftia acidovorans SPH-1 class I cytochrome c YP_001561529.1 526318 R 398578 CDS YP_001561530.1 160895948 5746036 complement(527079..528536) 1 NC_010002.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: aav:Aave_0387 transcriptional regulator, fis family; RND efflux system outer membrane lipoprotein 528536 5746036 Daci_0499 Delftia acidovorans SPH-1 RND efflux system outer membrane lipoprotein YP_001561530.1 527079 R 398578 CDS YP_001561531.1 160895949 5746037 complement(528529..531684) 1 NC_010002.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: pol:Bpro_2036 hydrophobe/amphiphile efflux-1 HAE1; hydrophobe/amphiphile efflux-1 family protein 531684 5746037 Daci_0500 Delftia acidovorans SPH-1 hydrophobe/amphiphile efflux-1 family protein YP_001561531.1 528529 R 398578 CDS YP_001561532.1 160895950 5746038 complement(531700..532992) 1 NC_010002.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pna:Pnap_2887 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 532992 5746038 Daci_0501 Delftia acidovorans SPH-1 RND family efflux transporter MFP subunit YP_001561532.1 531700 R 398578 CDS YP_001561533.1 160895951 5746039 533152..533817 1 NC_010002.1 PFAM: regulatory protein TetR; Tetracycline transcriptional repressor MAATS-type domain protein; KEGG: aav:Aave_0390 transcriptional regulator, TetR family; TetR family transcriptional regulator 533817 5746039 Daci_0502 Delftia acidovorans SPH-1 TetR family transcriptional regulator YP_001561533.1 533152 D 398578 CDS YP_001561534.1 160895952 5746044 534475..535665 1 NC_010002.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 535665 5746044 Daci_0503 Delftia acidovorans SPH-1 elongation factor Tu YP_001561534.1 534475 D 398578 CDS YP_001561535.1 160895953 5746046 535837..536220 1 NC_010002.1 forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 536220 secE 5746046 secE Delftia acidovorans SPH-1 preprotein translocase subunit SecE YP_001561535.1 535837 D 398578 CDS YP_001561536.1 160895954 5746047 536220..536804 1 NC_010002.1 TIGRFAM: transcription termination/antitermination factor NusG; PFAM: KOW domain protein; NGN domain protein; KEGG: ajs:Ajs_3902 NusG antitermination factor; NusG antitermination factor 536804 5746047 Daci_0505 Delftia acidovorans SPH-1 NusG antitermination factor YP_001561536.1 536220 D 398578 CDS YP_001561537.1 160895955 5746048 536946..537377 1 NC_010002.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 537377 rplK 5746048 rplK Delftia acidovorans SPH-1 50S ribosomal protein L11 YP_001561537.1 536946 D 398578 CDS YP_001561538.1 160895956 5746049 537378..538073 1 NC_010002.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 538073 rplA 5746049 rplA Delftia acidovorans SPH-1 50S ribosomal protein L1 YP_001561538.1 537378 D 398578 CDS YP_001561539.1 160895957 5746050 538300..538827 1 NC_010002.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 538827 rplJ 5746050 rplJ Delftia acidovorans SPH-1 50S ribosomal protein L10 YP_001561539.1 538300 D 398578 CDS YP_001561540.1 160895958 5746051 538865..539242 1 NC_010002.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 539242 rplL 5746051 rplL Delftia acidovorans SPH-1 50S ribosomal protein L7/L12 YP_001561540.1 538865 D 398578 CDS YP_001561541.1 160895959 5746052 539519..543631 1 NC_010002.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 543631 rpoB 5746052 rpoB Delftia acidovorans SPH-1 DNA-directed RNA polymerase subunit beta YP_001561541.1 539519 D 398578 CDS YP_001561542.1 160895960 5746053 543655..547884 1 NC_010002.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 547884 5746053 Daci_0511 Delftia acidovorans SPH-1 DNA-directed RNA polymerase subunit beta' YP_001561542.1 543655 D 398578 CDS YP_001561543.1 160895961 5746054 547966..548649 1 NC_010002.1 KEGG: aav:Aave_4529 LemA; hypothetical protein 548649 5746054 Daci_0512 Delftia acidovorans SPH-1 hypothetical protein YP_001561543.1 547966 D 398578 CDS YP_001561544.1 160895962 5746055 548646..550034 1 NC_010002.1 TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; KEGG: vei:Veis_2266 sun protein; sun protein 550034 5746055 Daci_0513 Delftia acidovorans SPH-1 sun protein YP_001561544.1 548646 D 398578 CDS YP_001561545.1 160895963 5746056 550099..550662 1 NC_010002.1 KEGG: aav:Aave_4527 putative proline rich signal peptide protein; putative proline rich signal peptide protein 550662 5746056 Daci_0514 Delftia acidovorans SPH-1 putative proline rich signal peptide protein YP_001561545.1 550099 D 398578 CDS YP_001561546.1 160895964 5746057 550659..553001 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: aav:Aave_4526 multi-sensor signal transduction histidine kinase; PAS/PAC sensor signal transduction histidine kinase 553001 5746057 Daci_0515 Delftia acidovorans SPH-1 PAS/PAC sensor signal transduction histidine kinase YP_001561546.1 550659 D 398578 CDS YP_001561547.1 160895965 5746058 553043..553714 1 NC_010002.1 PFAM: response regulator receiver; helix-turn-helix Fis-type; KEGG: aav:Aave_4525 two component transcriptional regulator, fis family; two component Fis family transcriptional regulator 553714 5746058 Daci_0516 Delftia acidovorans SPH-1 two component Fis family transcriptional regulator YP_001561547.1 553043 D 398578 CDS YP_001561548.1 160895966 5746060 complement(553958..554287) 1 NC_010002.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: mms:mma_3216 hypothetical protein; cupin 554287 5746060 Daci_0517 Delftia acidovorans SPH-1 cupin YP_001561548.1 553958 R 398578 CDS YP_001561549.1 160895967 5746061 554572..555012 1 NC_010002.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: rfr:Rfer_1866 transcriptional regulator, BadM/Rrf2 family; BadM/Rrf2 family transcriptional regulator 555012 5746061 Daci_0518 Delftia acidovorans SPH-1 BadM/Rrf2 family transcriptional regulator YP_001561549.1 554572 D 398578 CDS YP_001561550.1 160895968 5746062 555009..555461 1 NC_010002.1 KEGG: net:Neut_0622 protein of unknown function DUF474; hypothetical protein 555461 5746062 Daci_0519 Delftia acidovorans SPH-1 hypothetical protein YP_001561550.1 555009 D 398578 CDS YP_001561551.1 160895969 5746063 555532..559056 1 NC_010002.1 TIGRFAM: exodeoxyribonuclease V, gamma subunit; PFAM: Exodeoxyribonuclease V RecC subunit; KEGG: pau:PA14_55690 exodeoxyribonuclease V gamma chain; exodeoxyribonuclease V subunit gamma 559056 5746063 Daci_0520 Delftia acidovorans SPH-1 exodeoxyribonuclease V subunit gamma YP_001561551.1 555532 D 398578 CDS YP_001561552.1 160895970 5746064 559053..562877 1 NC_010002.1 TIGRFAM: exodeoxyribonuclease V, beta subunit; PFAM: UvrD/REP helicase; KEGG: pmy:Pmen_1986 exodeoxyribonuclease V, beta subunit; exodeoxyribonuclease V subunit beta 562877 5746064 Daci_0521 Delftia acidovorans SPH-1 exodeoxyribonuclease V subunit beta YP_001561552.1 559053 D 398578 CDS YP_001561553.1 160895971 5746065 562874..565081 1 NC_010002.1 KEGG: pmy:Pmen_1987 exodeoxyribonuclease V, alpha subunit; TIGRFAM: exodeoxyribonuclease V, alpha subunit; SMART: AAA ATPase; exodeoxyribonuclease V subunit alpha 565081 5746065 Daci_0522 Delftia acidovorans SPH-1 exodeoxyribonuclease V subunit alpha YP_001561553.1 562874 D 398578 CDS YP_001561554.1 160895972 5746066 complement(565100..565762) 1 NC_010002.1 PFAM: Glutathione S-transferase domain; KEGG: vei:Veis_4930 glutathione S-transferase, N-terminal domain; glutathione S-transferase domain-containing protein 565762 5746066 Daci_0523 Delftia acidovorans SPH-1 glutathione S-transferase domain-containing protein YP_001561554.1 565100 R 398578 CDS YP_001561555.1 160895973 5746067 565882..566241 1 NC_010002.1 KEGG: ajs:Ajs_3342 hypothetical protein; hypothetical protein 566241 5746067 Daci_0524 Delftia acidovorans SPH-1 hypothetical protein YP_001561555.1 565882 D 398578 CDS YP_001561556.1 160895974 5746068 566338..566850 1 NC_010002.1 PFAM: protein of unknown function DUF461; KEGG: pna:Pnap_1514 protein of unknown function DUF461; hypothetical protein 566850 5746068 Daci_0525 Delftia acidovorans SPH-1 hypothetical protein YP_001561556.1 566338 D 398578 CDS YP_001561557.1 160895975 5746069 566993..567949 1 NC_010002.1 KEGG: ajs:Ajs_3888 hypothetical protein; hypothetical protein 567949 5746069 Daci_0526 Delftia acidovorans SPH-1 hypothetical protein YP_001561557.1 566993 D 398578 CDS YP_001561558.1 160895976 5746070 568026..569261 1 NC_010002.1 KEGG: aav:Aave_4508 domain of unknown function DUF1745; hypothetical protein 569261 5746070 Daci_0527 Delftia acidovorans SPH-1 hypothetical protein YP_001561558.1 568026 D 398578 CDS YP_001561559.1 160895977 5746071 complement(569285..570616) 1 NC_010002.1 PFAM: FAD dependent oxidoreductase; KEGG: ajs:Ajs_3886 D-amino-acid dehydrogenase; D-amino-acid dehydrogenase 570616 5746071 Daci_0528 Delftia acidovorans SPH-1 D-amino-acid dehydrogenase YP_001561559.1 569285 R 398578 CDS YP_001561560.1 160895978 5746072 571464..581093 1 NC_010002.1 PFAM: Ig domain protein group 1 domain protein; KEGG: mmu:239611 mucin 19; Ig domain-containing protein 581093 5746072 Daci_0529 Delftia acidovorans SPH-1 Ig domain-containing protein YP_001561560.1 571464 D 398578 CDS YP_001561561.1 160895979 5746073 581400..584057 1 NC_010002.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; PepSY-associated TM helix domain protein; flavodoxin/nitric oxide synthase; KEGG: aav:Aave_4788 flavodoxin/nitric oxide synthase; flavodoxin/nitric oxide synthase 584057 5746073 Daci_0530 Delftia acidovorans SPH-1 flavodoxin/nitric oxide synthase YP_001561561.1 581400 D 398578 CDS YP_001561562.1 160895980 5746074 complement(584210..585370) 1 NC_010002.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase; KEGG: aav:Aave_4506 uncharacterized peroxidase-related enzyme; hypothetical protein 585370 5746074 Daci_0531 Delftia acidovorans SPH-1 hypothetical protein YP_001561562.1 584210 R 398578 CDS YP_001561563.1 160895981 5746075 complement(585378..586859) 1 NC_010002.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: aav:Aave_4505 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase 586859 5746075 Daci_0532 Delftia acidovorans SPH-1 FAD dependent oxidoreductase YP_001561563.1 585378 R 398578 CDS YP_001561564.1 160895982 5746076 complement(586925..587959) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: aav:Aave_4503 uncharacterized protein UPF0065; hypothetical protein 587959 5746076 Daci_0533 Delftia acidovorans SPH-1 hypothetical protein YP_001561564.1 586925 R 398578 CDS YP_001561565.1 160895983 5746077 complement(588095..588484) 1 NC_010002.1 KEGG: ajs:Ajs_3882 hypothetical protein; hypothetical protein 588484 5746077 Daci_0534 Delftia acidovorans SPH-1 hypothetical protein YP_001561565.1 588095 R 398578 CDS YP_001561566.1 160895984 5746078 complement(588667..589407) 1 NC_010002.1 SMART: helix-turn-helix domain protein; KEGG: aav:Aave_4499 transcriptional regulator, XRE family; XRE family transcriptional regulator 589407 5746078 Daci_0535 Delftia acidovorans SPH-1 XRE family transcriptional regulator YP_001561566.1 588667 R 398578 CDS YP_001561567.1 160895985 5746079 589522..590346 1 NC_010002.1 KEGG: vei:Veis_1658 hypothetical protein; hypothetical protein 590346 5746079 Daci_0536 Delftia acidovorans SPH-1 hypothetical protein YP_001561567.1 589522 D 398578 CDS YP_001561568.1 160895986 5746080 590358..592322 1 NC_010002.1 PFAM: phospholipid/glycerol acyltransferase; major facilitator superfamily MFS_1; KEGG: ajs:Ajs_3878 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 592322 5746080 Daci_0537 Delftia acidovorans SPH-1 phospholipid/glycerol acyltransferase YP_001561568.1 590358 D 398578 CDS YP_001561569.1 160895987 5746081 complement(592319..593503) 1 NC_010002.1 PFAM: Saccharopine dehydrogenase; KEGG: pat:Patl_0966 saccharopine dehydrogenase; saccharopine dehydrogenase 593503 5746081 Daci_0538 Delftia acidovorans SPH-1 saccharopine dehydrogenase YP_001561569.1 592319 R 398578 CDS YP_001561570.1 160895988 5746082 593814..594287 1 NC_010002.1 PFAM: YiaAB two helix domain protein; KEGG: aav:Aave_4490 YiaAB two helix domain protein; YiaAB two helix domain-containing protein 594287 5746082 Daci_0539 Delftia acidovorans SPH-1 YiaAB two helix domain-containing protein YP_001561570.1 593814 D 398578 CDS YP_001561571.1 160895989 5746083 594325..594795 1 NC_010002.1 KEGG: ajs:Ajs_3874 hypothetical protein; hypothetical protein 594795 5746083 Daci_0540 Delftia acidovorans SPH-1 hypothetical protein YP_001561571.1 594325 D 398578 CDS YP_001561572.1 160895990 5746084 594804..595622 1 NC_010002.1 KEGG: aav:Aave_4488 hypothetical protein; hypothetical protein 595622 5746084 Daci_0541 Delftia acidovorans SPH-1 hypothetical protein YP_001561572.1 594804 D 398578 CDS YP_001561573.1 160895991 5746085 595690..596814 1 NC_010002.1 KEGG: ajs:Ajs_3872 hypothetical protein; hypothetical protein 596814 5746085 Daci_0542 Delftia acidovorans SPH-1 hypothetical protein YP_001561573.1 595690 D 398578 CDS YP_001561574.1 160895992 5746086 596924..598186 1 NC_010002.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rca:Rcas_2750 diguanylate cyclase; diguanylate cyclase 598186 5746086 Daci_0543 Delftia acidovorans SPH-1 diguanylate cyclase YP_001561574.1 596924 D 398578 CDS YP_001561575.1 160895993 5746087 598230..599474 1 NC_010002.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bra:BRADO2669 conserved hypothetical protein; putative membrane protein; putative diguanylate cyclase (GGDEF domain); diguanylate cyclase 599474 5746087 Daci_0544 Delftia acidovorans SPH-1 diguanylate cyclase YP_001561575.1 598230 D 398578 CDS YP_001561576.1 160895994 5746088 599595..600365 1 NC_010002.1 KEGG: mlo:mll7009 hypothetical protein; hypothetical protein 600365 5746088 Daci_0545 Delftia acidovorans SPH-1 hypothetical protein YP_001561576.1 599595 D 398578 CDS YP_001561577.1 160895995 5746089 complement(600395..601393) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: reh:H16_A0091 probable extra-cytoplasmic solute receptor; hypothetical protein 601393 5746089 Daci_0546 Delftia acidovorans SPH-1 hypothetical protein YP_001561577.1 600395 R 398578 CDS YP_001561578.1 160895996 5746090 complement(601390..602520) 1 NC_010002.1 KEGG: bch:Bcen2424_6217 hypothetical protein; hypothetical protein 602520 5746090 Daci_0547 Delftia acidovorans SPH-1 hypothetical protein YP_001561578.1 601390 R 398578 CDS YP_001561579.1 160895997 5746091 602632..603582 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bch:Bcen2424_6218 transcriptional regulator, LysR family; LysR family transcriptional regulator 603582 5746091 Daci_0548 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001561579.1 602632 D 398578 CDS YP_001561580.1 160895998 5746092 complement(603619..604791) 1 NC_010002.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 604791 tgt 5746092 tgt Delftia acidovorans SPH-1 queuine tRNA-ribosyltransferase YP_001561580.1 603619 R 398578 CDS YP_001561581.1 160895999 5746093 604927..605397 1 NC_010002.1 PFAM: UspA domain protein; KEGG: ajs:Ajs_3869 UspA domain protein; UspA domain-containing protein 605397 5746093 Daci_0550 Delftia acidovorans SPH-1 UspA domain-containing protein YP_001561581.1 604927 D 398578 CDS YP_001561582.1 160896000 5746094 complement(605421..605873) 1 NC_010002.1 KEGG: ajs:Ajs_3868 hypothetical protein; hypothetical protein 605873 5746094 Daci_0551 Delftia acidovorans SPH-1 hypothetical protein YP_001561582.1 605421 R 398578 CDS YP_001561583.1 160896001 5746095 complement(606041..607261) 1 NC_010002.1 PFAM: phospholipase A1; KEGG: aav:Aave_4476 phospholipase A1; phospholipase A1 607261 5746095 Daci_0552 Delftia acidovorans SPH-1 phospholipase A1 YP_001561583.1 606041 R 398578 CDS YP_001561584.1 160896002 5746096 complement(607350..607796) 1 NC_010002.1 KEGG: ajs:Ajs_3866 hypothetical protein; hypothetical protein 607796 5746096 Daci_0553 Delftia acidovorans SPH-1 hypothetical protein YP_001561584.1 607350 R 398578 CDS YP_001561585.1 160896003 5746097 complement(607856..609973) 1 NC_010002.1 PFAM: UvrD/REP helicase; KEGG: ajs:Ajs_3865 UvrD/REP helicase; UvrD/REP helicase 609973 5746097 Daci_0554 Delftia acidovorans SPH-1 UvrD/REP helicase YP_001561585.1 607856 R 398578 CDS YP_001561586.1 160896004 5746098 610207..610953 1 NC_010002.1 hypothetical protein 610953 5746098 Daci_0555 Delftia acidovorans SPH-1 hypothetical protein YP_001561586.1 610207 D 398578 CDS YP_001561587.1 160896005 5746099 610950..611513 1 NC_010002.1 PFAM: Miro domain protein; KEGG: dno:DNO_0146 hypothetical protein; Miro domain-containing protein 611513 5746099 Daci_0556 Delftia acidovorans SPH-1 Miro domain-containing protein YP_001561587.1 610950 D 398578 CDS YP_001561588.1 160896006 5746100 611510..611911 1 NC_010002.1 KEGG: dno:DNO_0145 hypothetical protein; hypothetical protein 611911 5746100 Daci_0557 Delftia acidovorans SPH-1 hypothetical protein YP_001561588.1 611510 D 398578 CDS YP_001561589.1 160896007 5746101 612011..612370 1 NC_010002.1 KEGG: dno:DNO_0148 hypothetical protein; hypothetical protein 612370 5746101 Daci_0558 Delftia acidovorans SPH-1 hypothetical protein YP_001561589.1 612011 D 398578 CDS YP_001561590.1 160896008 5746102 612499..613449 1 NC_010002.1 PFAM: Auxin Efflux Carrier; KEGG: ajs:Ajs_3864 auxin efflux carrier; auxin efflux carrier 613449 5746102 Daci_0559 Delftia acidovorans SPH-1 auxin efflux carrier YP_001561590.1 612499 D 398578 CDS YP_001561591.1 160896009 5746103 613551..615170 1 NC_010002.1 KEGG: rpb:RPB_0468 hypothetical protein; glycosyltransferase 615170 5746103 Daci_0560 Delftia acidovorans SPH-1 glycosyltransferase YP_001561591.1 613551 D 398578 CDS YP_001561592.1 160896010 5746104 615167..616171 1 NC_010002.1 PFAM: glycosyl transferase family 2; KEGG: aav:Aave_0599 glycosyl transferase, family 2; glycosyl transferase family protein 616171 5746104 Daci_0561 Delftia acidovorans SPH-1 glycosyl transferase family protein YP_001561592.1 615167 D 398578 CDS YP_001561593.1 160896011 5746105 616174..616596 1 NC_010002.1 PFAM: GtrA family protein; KEGG: aav:Aave_0598 GtrA family protein; GtrA family protein 616596 5746105 Daci_0562 Delftia acidovorans SPH-1 GtrA family protein YP_001561593.1 616174 D 398578 CDS YP_001561594.1 160896012 5746106 616593..617459 1 NC_010002.1 PFAM: YdjC family protein; KEGG: aav:Aave_0597 hypothetical protein; hypothetical protein 617459 5746106 Daci_0563 Delftia acidovorans SPH-1 hypothetical protein YP_001561594.1 616593 D 398578 CDS YP_001561595.1 160896013 5746107 complement(617643..618779) 1 NC_010002.1 KEGG: aav:Aave_4182 L-asparaginases, type II; TIGRFAM: L-asparaginase, type II; PFAM: Asparaginase/glutaminase; L-asparaginase I 618779 5746107 Daci_0564 Delftia acidovorans SPH-1 L-asparaginase I YP_001561595.1 617643 R 398578 CDS YP_001561596.1 160896014 5746108 complement(619003..621291) 1 NC_010002.1 KEGG: aav:Aave_4471 primosomal protein N'; TIGRFAM: primosomal protein N'; PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; primosomal protein N' 621291 5746108 Daci_0565 Delftia acidovorans SPH-1 primosomal protein N' YP_001561596.1 619003 R 398578 CDS YP_001561597.1 160896015 5746109 complement(621740..622852) 1 NC_010002.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 622852 hemE 5746109 hemE Delftia acidovorans SPH-1 uroporphyrinogen decarboxylase YP_001561597.1 621740 R 398578 CDS YP_001561598.1 160896016 5746110 623030..624019 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: vei:Veis_2295 uncharacterized protein UPF0065; hypothetical protein 624019 5746110 Daci_0567 Delftia acidovorans SPH-1 hypothetical protein YP_001561598.1 623030 D 398578 CDS YP_001561599.1 160896017 5746111 624251..625033 1 NC_010002.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mpt:Mpe_A0984 putative enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 625033 5746111 Daci_0568 Delftia acidovorans SPH-1 enoyl-CoA hydratase/isomerase YP_001561599.1 624251 D 398578 CDS YP_001561600.1 160896018 5746112 625045..625512 1 NC_010002.1 TIGRFAM: phenylacetic acid degradation protein PaaD; PFAM: thioesterase superfamily protein; KEGG: azo:azo0302 phenylacetic acid degradation protein PaaI; phenylacetic acid degradation protein PaaD 625512 5746112 Daci_0569 Delftia acidovorans SPH-1 phenylacetic acid degradation protein PaaD YP_001561600.1 625045 D 398578 CDS YP_001561601.1 160896019 5746113 625524..626828 1 NC_010002.1 TIGRFAM: phenylacetate-CoA ligase; KEGG: mpt:Mpe_A0986 phenylacetate--CoA ligase; phenylacetate-CoA ligase 626828 5746113 Daci_0570 Delftia acidovorans SPH-1 phenylacetate-CoA ligase YP_001561601.1 625524 D 398578 CDS YP_001561602.1 160896020 5746114 626846..627505 1 NC_010002.1 PFAM: regulatory protein TetR; KEGG: vei:Veis_3950 transcriptional regulator, TetR family; TetR family transcriptional regulator 627505 5746114 Daci_0571 Delftia acidovorans SPH-1 TetR family transcriptional regulator YP_001561602.1 626846 D 398578 CDS YP_001561603.1 160896021 5746115 627541..628692 1 NC_010002.1 PFAM: Extracellular ligand-binding receptor; KEGG: vei:Veis_3951 extracellular ligand-binding receptor; extracellular ligand-binding receptor 628692 5746115 Daci_0572 Delftia acidovorans SPH-1 extracellular ligand-binding receptor YP_001561603.1 627541 D 398578 CDS YP_001561604.1 160896022 5746116 628776..629804 1 NC_010002.1 PFAM: inner-membrane translocator; KEGG: vei:Veis_3952 inner-membrane translocator; inner-membrane translocator 629804 5746116 Daci_0573 Delftia acidovorans SPH-1 inner-membrane translocator YP_001561604.1 628776 D 398578 CDS YP_001561605.1 160896023 5746117 629801..631693 1 NC_010002.1 PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_3953 ABC transporter related; ABC transporter-like protein 631693 5746117 Daci_0574 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001561605.1 629801 D 398578 CDS YP_001561606.1 160896024 5746118 631690..632436 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eba:ebA3560 amino-acid composite ATP-binding transmembrane ABC transporter protein; ABC transporter-like protein 632436 5746118 Daci_0575 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001561606.1 631690 D 398578 CDS YP_001561607.1 160896025 5746119 632450..632833 1 NC_010002.1 hypothetical protein 632833 5746119 Daci_0576 Delftia acidovorans SPH-1 hypothetical protein YP_001561607.1 632450 D 398578 CDS YP_001561608.1 160896026 5746120 complement(633469..634557) 1 NC_010002.1 hypothetical protein 634557 5746120 Daci_0577 Delftia acidovorans SPH-1 hypothetical protein YP_001561608.1 633469 R 398578 CDS YP_001561609.1 160896027 5746121 complement(635590..636573) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: pol:Bpro_4537 uncharacterized protein UPF0065; hypothetical protein 636573 5746121 Daci_0578 Delftia acidovorans SPH-1 hypothetical protein YP_001561609.1 635590 R 398578 CDS YP_001561610.1 160896028 5746122 complement(637064..638740) 1 NC_010002.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: pol:Bpro_4535 monooxygenase, FAD-binding; FAD-dependent oxidoreductase 638740 5746122 Daci_0579 Delftia acidovorans SPH-1 FAD-dependent oxidoreductase YP_001561610.1 637064 R 398578 CDS YP_001561611.1 160896029 5746123 complement(638874..639839) 1 NC_010002.1 PFAM: beta-lactamase domain protein; KEGG: vei:Veis_4551 beta-lactamase domain protein; beta-lactamase domain-containing protein 639839 5746123 Daci_0580 Delftia acidovorans SPH-1 beta-lactamase domain-containing protein YP_001561611.1 638874 R 398578 CDS YP_001561612.1 160896030 5746124 639914..640807 1 NC_010002.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bbt:BBta_4674 putative transcriptional regulatory protein; IclR family transcriptional regulator 640807 5746124 Daci_0581 Delftia acidovorans SPH-1 IclR family transcriptional regulator YP_001561612.1 639914 D 398578 CDS YP_001561613.1 160896031 5746125 complement(640827..642659) 1 NC_010002.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: aav:Aave_1100 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 642659 5746125 Daci_0582 Delftia acidovorans SPH-1 methyl-accepting chemotaxis sensory transducer YP_001561613.1 640827 R 398578 CDS YP_001561614.1 160896032 5746126 642838..643800 1 NC_010002.1 KEGG: pol:Bpro_2243 hypothetical protein; putative hemolysin-like protein 643800 5746126 Daci_0583 Delftia acidovorans SPH-1 putative hemolysin-like protein YP_001561614.1 642838 D 398578 CDS YP_001561615.1 160896033 5746127 complement(644057..644584) 1 NC_010002.1 KEGG: ajs:Ajs_3857 CoA-binding domain protein; CoA-binding domain-containing protein 644584 5746127 Daci_0584 Delftia acidovorans SPH-1 CoA-binding domain-containing protein YP_001561615.1 644057 R 398578 CDS YP_001561616.1 160896034 5746128 complement(644553..645824) 1 NC_010002.1 PFAM: Na+/H+ antiporter NhaA; KEGG: ajs:Ajs_3856 Na+/H+ antiporter NhaA; Na+/H+ antiporter NhaA 645824 5746128 Daci_0585 Delftia acidovorans SPH-1 Na+/H+ antiporter NhaA YP_001561616.1 644553 R 398578 CDS YP_001561617.1 160896035 5746129 complement(646060..646593) 1 NC_010002.1 hypothetical protein 646593 5746129 Daci_0586 Delftia acidovorans SPH-1 hypothetical protein YP_001561617.1 646060 R 398578 CDS YP_001561618.1 160896036 5746130 complement(646787..649183) 1 NC_010002.1 PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: aav:Aave_4456 cytochrome c biogenesis protein, transmembrane region; cytochrome c biogenesis protein transmembrane region 649183 5746130 Daci_0587 Delftia acidovorans SPH-1 cytochrome c biogenesis protein transmembrane region YP_001561618.1 646787 R 398578 CDS YP_001561619.1 160896037 5746131 649272..650249 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: rme:Rmet_5616 uncharacterized protein UPF0065; hypothetical protein 650249 5746131 Daci_0588 Delftia acidovorans SPH-1 hypothetical protein YP_001561619.1 649272 D 398578 CDS YP_001561620.1 160896038 5746132 650291..651154 1 NC_010002.1 PFAM: Creatininase; KEGG: ajs:Ajs_3852 creatininase; creatininase 651154 5746132 Daci_0589 Delftia acidovorans SPH-1 creatininase YP_001561620.1 650291 D 398578 CDS YP_001561621.1 160896039 5746133 complement(651513..652487) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: pol:Bpro_4316 uncharacterized protein UPF0065; hypothetical protein 652487 5746133 Daci_0590 Delftia acidovorans SPH-1 hypothetical protein YP_001561621.1 651513 R 398578 CDS YP_001561622.1 160896040 5746134 complement(652607..653290) 1 NC_010002.1 PFAM: Phosphoglycerate mutase; KEGG: aav:Aave_4443 phosphoglycerate mutase; phosphoglycerate mutase 653290 5746134 Daci_0591 Delftia acidovorans SPH-1 phosphoglycerate mutase YP_001561622.1 652607 R 398578 CDS YP_001561623.1 160896041 5746135 complement(653378..654337) 1 NC_010002.1 TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: pol:Bpro_4242 phenazine biosynthesis PhzC/PhzF protein; PhzF family phenazine biosynthesis protein 654337 5746135 Daci_0592 Delftia acidovorans SPH-1 PhzF family phenazine biosynthesis protein YP_001561623.1 653378 R 398578 CDS YP_001561624.1 160896042 5746136 complement(654562..655914) 1 NC_010002.1 PFAM: aminotransferase class I and II; KEGG: aav:Aave_4437 putative transcriptional regulator, GntR family; GntR family transcriptional regulator 655914 5746136 Daci_0593 Delftia acidovorans SPH-1 GntR family transcriptional regulator YP_001561624.1 654562 R 398578 CDS YP_001561625.1 160896043 5746137 complement(655975..656577) 1 NC_010002.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: ajs:Ajs_3843 hypothetical protein; lysine exporter protein LysE/YggA 656577 5746137 Daci_0594 Delftia acidovorans SPH-1 lysine exporter protein LysE/YggA YP_001561625.1 655975 R 398578 CDS YP_001561626.1 160896044 5746138 656795..658246 1 NC_010002.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: aav:Aave_4434 transcriptional regulator, GntR family; transcriptional regulator 658246 5746138 Daci_0595 Delftia acidovorans SPH-1 transcriptional regulator YP_001561626.1 656795 D 398578 CDS YP_001561627.1 160896045 5746139 complement(658460..659173) 1 NC_010002.1 KEGG: ajs:Ajs_3823 RNA polymerase, sigma 28 subunit, FliA/WhiG family; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; RNA polymerase sigma 28 subunit FliA/WhiG 659173 5746139 Daci_0596 Delftia acidovorans SPH-1 RNA polymerase sigma 28 subunit FliA/WhiG YP_001561627.1 658460 R 398578 CDS YP_001561628.1 160896046 5746140 complement(659179..660060) 1 NC_010002.1 KEGG: ajs:Ajs_3822 hypothetical protein; hypothetical protein 660060 5746140 Daci_0597 Delftia acidovorans SPH-1 hypothetical protein YP_001561628.1 659179 R 398578 CDS YP_001561629.1 160896047 5746141 complement(660053..661699) 1 NC_010002.1 PFAM: GTP-binding signal recognition particle SRP54 G- domain; SMART: AAA ATPase; KEGG: aav:Aave_4414 GTP-binding signal recognition particle SRP54, G-domain; GTP-binding signal recognition particle 661699 5746141 Daci_0598 Delftia acidovorans SPH-1 GTP-binding signal recognition particle YP_001561629.1 660053 R 398578 CDS YP_001561630.1 160896048 5746142 complement(661696..663795) 1 NC_010002.1 TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein; KEGG: ajs:Ajs_3820 flagellar biosynthesis protein FlhA; flagellar biosynthesis protein FlhA 663795 5746142 Daci_0599 Delftia acidovorans SPH-1 flagellar biosynthesis protein FlhA YP_001561630.1 661696 R 398578 CDS YP_001561631.1 160896049 5746143 complement(663792..664967) 1 NC_010002.1 PFAM: type III secretion exporter; KEGG: ajs:Ajs_3819 type III secretion exporter; type III secretion exporter 664967 5746143 Daci_0600 Delftia acidovorans SPH-1 type III secretion exporter YP_001561631.1 663792 R 398578 CDS YP_001561632.1 160896050 5746144 complement(665189..665803) 1 NC_010002.1 PFAM: Chemotaxis phosphatase CheZ; KEGG: aav:Aave_4411 chemotaxis phosphatase, CheZ; chemotaxis phosphatase CheZ 665803 5746144 Daci_0601 Delftia acidovorans SPH-1 chemotaxis phosphatase CheZ YP_001561632.1 665189 R 398578 CDS YP_001561633.1 160896051 5746145 complement(665814..666200) 1 NC_010002.1 PFAM: response regulator receiver; KEGG: aav:Aave_4410 response regulator receiver protein; response regulator receiver protein 666200 5746145 Daci_0602 Delftia acidovorans SPH-1 response regulator receiver protein YP_001561633.1 665814 R 398578 CDS YP_001561634.1 160896052 5746146 complement(666325..667362) 1 NC_010002.1 PFAM: OmpA/MotB domain protein; KEGG: aav:Aave_4409 OmpA/MotB domain protein; OmpA/MotB domain-containing protein 667362 5746146 Daci_0603 Delftia acidovorans SPH-1 OmpA/MotB domain-containing protein YP_001561634.1 666325 R 398578 CDS YP_001561635.1 160896053 5746147 complement(667387..668247) 1 NC_010002.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: ajs:Ajs_3815 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 668247 5746147 Daci_0604 Delftia acidovorans SPH-1 MotA/TolQ/ExbB proton channel YP_001561635.1 667387 R 398578 CDS YP_001561636.1 160896054 5746148 668623..670284 1 NC_010002.1 SMART: Tetratricopeptide domain protein; KEGG: mfa:Mfla_2639 tetratricopeptide TPR_2; hypothetical protein 670284 5746148 Daci_0605 Delftia acidovorans SPH-1 hypothetical protein YP_001561636.1 668623 D 398578 CDS YP_001561637.1 160896055 5746149 670281..671486 1 NC_010002.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: mfa:Mfla_2640 DegT/DnrJ/EryC1/StrS aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase 671486 5746149 Daci_0606 Delftia acidovorans SPH-1 DegT/DnrJ/EryC1/StrS aminotransferase YP_001561637.1 670281 D 398578 CDS YP_001561638.1 160896056 5746150 complement(671524..672108) 1 NC_010002.1 KEGG: mfa:Mfla_2647 hypothetical protein; hypothetical protein 672108 5746150 Daci_0607 Delftia acidovorans SPH-1 hypothetical protein YP_001561638.1 671524 R 398578 CDS YP_001561639.1 160896057 5746151 complement(672157..673125) 1 NC_010002.1 hypothetical protein 673125 5746151 Daci_0608 Delftia acidovorans SPH-1 hypothetical protein YP_001561639.1 672157 R 398578 CDS YP_001561640.1 160896058 5746152 complement(673128..673793) 1 NC_010002.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pfl:PFL_3447 hypothetical protein; type 11 methyltransferase 673793 5746152 Daci_0609 Delftia acidovorans SPH-1 type 11 methyltransferase YP_001561640.1 673128 R 398578 CDS YP_001561641.1 160896059 5746153 complement(673829..674974) 1 NC_010002.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: mfa:Mfla_2646 Rieske (2Fe-2S) region; Rieske (2Fe-2S) domain-containing protein 674974 5746153 Daci_0610 Delftia acidovorans SPH-1 Rieske (2Fe-2S) domain-containing protein YP_001561641.1 673829 R 398578 CDS YP_001561642.1 160896060 5746154 complement(674979..675629) 1 NC_010002.1 KEGG: xac:XAC1961 acetyltransferase; acetyltransferase 675629 5746154 Daci_0611 Delftia acidovorans SPH-1 acetyltransferase YP_001561642.1 674979 R 398578 CDS YP_001561643.1 160896061 5746155 complement(675629..676366) 1 NC_010002.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mfa:Mfla_2644 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 676366 5746155 Daci_0612 Delftia acidovorans SPH-1 short-chain dehydrogenase/reductase SDR YP_001561643.1 675629 R 398578 CDS YP_001561644.1 160896062 5746156 complement(676363..677124) 1 NC_010002.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: xac:XAC1963 3-oxoacyl-[ACP] reductase; short-chain dehydrogenase/reductase SDR 677124 5746156 Daci_0613 Delftia acidovorans SPH-1 short-chain dehydrogenase/reductase SDR YP_001561644.1 676363 R 398578 CDS YP_001561645.1 160896063 5746157 complement(677121..678158) 1 NC_010002.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: mfa:Mfla_2642 3-oxoacyl-(acyl-carrier protein) synthase; beta-ketoacyl-acyl-carrier-protein synthase I 678158 5746157 Daci_0614 Delftia acidovorans SPH-1 beta-ketoacyl-acyl-carrier-protein synthase I YP_001561645.1 677121 R 398578 CDS YP_001561646.1 160896064 5746158 complement(678164..678388) 1 NC_010002.1 KEGG: pfl:PFL_1656 acyl carrier protein-related protein; acyl carrier protein-like protein 678388 5746158 Daci_0615 Delftia acidovorans SPH-1 acyl carrier protein-like protein YP_001561646.1 678164 R 398578 CDS YP_001561647.1 160896065 5746159 678625..681549 1 NC_010002.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bte:BTH_I3210 TPR domain protein; hypothetical protein 681549 5746159 Daci_0616 Delftia acidovorans SPH-1 hypothetical protein YP_001561647.1 678625 D 398578 CDS YP_001561648.1 160896066 5746160 681798..682649 1 NC_010002.1 PFAM: flagellin domain protein; KEGG: ajs:Ajs_3813 flagellin domain protein; flagellin domain-containing protein 682649 5746160 Daci_0617 Delftia acidovorans SPH-1 flagellin domain-containing protein YP_001561648.1 681798 D 398578 CDS YP_001561649.1 160896067 5746161 682941..683813 1 NC_010002.1 PFAM: flagellin domain protein; KEGG: ajs:Ajs_3812 flagellin domain protein; flagellin domain-containing protein 683813 5746161 Daci_0618 Delftia acidovorans SPH-1 flagellin domain-containing protein YP_001561649.1 682941 D 398578 CDS YP_001561650.1 160896068 5746162 683995..685416 1 NC_010002.1 PFAM: flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein; KEGG: ajs:Ajs_3811 flagellar hook-associated 2 domain protein; flagellar hook-associated 2 domain-containing protein 685416 5746162 Daci_0619 Delftia acidovorans SPH-1 flagellar hook-associated 2 domain-containing protein YP_001561650.1 683995 D 398578 CDS YP_001561651.1 160896069 5746163 685521..685934 1 NC_010002.1 PFAM: flagellar protein FliS; KEGG: ajs:Ajs_3810 flagellar protein FliS; flagellar protein FliS 685934 5746163 Daci_0620 Delftia acidovorans SPH-1 flagellar protein FliS YP_001561651.1 685521 D 398578 CDS YP_001561652.1 160896070 5746164 685937..686236 1 NC_010002.1 KEGG: ajs:Ajs_3809 flagellar protein FliT; flagellar protein FliT 686236 5746164 Daci_0621 Delftia acidovorans SPH-1 flagellar protein FliT YP_001561652.1 685937 D 398578 CDS YP_001561653.1 160896071 5746165 complement(686380..687672) 1 NC_010002.1 PFAM: Metal-dependent hydrolase HDOD; KEGG: ajs:Ajs_3839 putative signal transduction protein; putative signal transduction protein 687672 5746165 Daci_0622 Delftia acidovorans SPH-1 putative signal transduction protein YP_001561653.1 686380 R 398578 CDS YP_001561654.1 160896072 5746166 complement(687694..688893) 1 NC_010002.1 TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; KEGG: rfr:Rfer_3724 flagellin-like; flagellar hook-associated protein 3 688893 5746166 Daci_0623 Delftia acidovorans SPH-1 flagellar hook-associated protein 3 YP_001561654.1 687694 R 398578 CDS YP_001561655.1 160896073 5746167 complement(688917..690845) 1 NC_010002.1 TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; KEGG: aav:Aave_4430 flagellar hook-associated protein FlgK; flagellar hook-associated protein FlgK 690845 5746167 Daci_0624 Delftia acidovorans SPH-1 flagellar hook-associated protein FlgK YP_001561655.1 688917 R 398578 CDS YP_001561656.1 160896074 5746168 complement(690893..691855) 1 NC_010002.1 KEGG: aav:Aave_4429 flagellar rod assembly protein/muramidase FlgJ; TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2; flagellar rod assembly protein/muramidase FlgJ 691855 5746168 Daci_0625 Delftia acidovorans SPH-1 flagellar rod assembly protein/muramidase FlgJ YP_001561656.1 690893 R 398578 CDS YP_001561657.1 160896075 5746169 complement(691852..693000) 1 NC_010002.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein 693000 flgI 5746169 flgI Delftia acidovorans SPH-1 flagellar basal body P-ring protein YP_001561657.1 691852 R 398578 CDS YP_001561658.1 160896076 5746170 complement(693021..693728) 1 NC_010002.1 PFAM: flagellar L-ring protein; KEGG: aav:Aave_4426 flagellar L-ring protein; flagellar L-ring protein 693728 5746170 Daci_0627 Delftia acidovorans SPH-1 flagellar L-ring protein YP_001561658.1 693021 R 398578 CDS YP_001561659.1 160896077 5746171 complement(693930..694712) 1 NC_010002.1 TIGRFAM: flagellar basal-body rod protein FlgG; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: aav:Aave_4425 flagellar basal-body rod protein FlgG; flagellar basal-body rod protein FlgG 694712 5746171 Daci_0628 Delftia acidovorans SPH-1 flagellar basal-body rod protein FlgG YP_001561659.1 693930 R 398578 CDS YP_001561660.1 160896078 5746172 complement(694735..695475) 1 NC_010002.1 TIGRFAM: flagellar basal-body rod protein FlgF; PFAM: flagellar basal body rod protein; KEGG: aav:Aave_4424 transcriptional regulator, fis family; flagellar basal-body rod protein FlgF 695475 5746172 Daci_0629 Delftia acidovorans SPH-1 flagellar basal-body rod protein FlgF YP_001561660.1 694735 R 398578 CDS YP_001561661.1 160896079 5746173 complement(695505..696776) 1 NC_010002.1 PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; KEGG: vei:Veis_0566 flagellar basal body FlaE domain protein; flagellar basal body FlaE domain-containing protein 696776 5746173 Daci_0630 Delftia acidovorans SPH-1 flagellar basal body FlaE domain-containing protein YP_001561661.1 695505 R 398578 CDS YP_001561662.1 160896080 5746174 complement(696817..697479) 1 NC_010002.1 PFAM: flagellar hook capping protein; KEGG: aav:Aave_4422 flagellar hook capping protein; flagellar hook capping protein 697479 5746174 Daci_0631 Delftia acidovorans SPH-1 flagellar hook capping protein YP_001561662.1 696817 R 398578 CDS YP_001561663.1 160896081 5746175 complement(697514..697918) 1 NC_010002.1 TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: ajs:Ajs_3828 flagellar basal-body rod protein FlgC; flagellar basal-body rod protein FlgC 697918 5746175 Daci_0632 Delftia acidovorans SPH-1 flagellar basal-body rod protein FlgC YP_001561663.1 697514 R 398578 CDS YP_001561664.1 160896082 5746176 complement(697949..698431) 1 NC_010002.1 TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: flagellar basal body rod protein; KEGG: ajs:Ajs_3827 flagellar basal-body rod protein FlgB; flagellar basal-body rod protein FlgB 698431 5746176 Daci_0633 Delftia acidovorans SPH-1 flagellar basal-body rod protein FlgB YP_001561664.1 697949 R 398578 CDS YP_001561665.1 160896083 5746177 698597..699361 1 NC_010002.1 KEGG: aav:Aave_4419 SAF domain; SAF domain-containing protein 699361 5746177 Daci_0634 Delftia acidovorans SPH-1 SAF domain-containing protein YP_001561665.1 698597 D 398578 CDS YP_001561666.1 160896084 5746178 699440..699760 1 NC_010002.1 KEGG: aav:Aave_4418 anti-sigma-28 factor, FlgM; putative anti-sigma-28 factor FlgM 699760 5746178 Daci_0635 Delftia acidovorans SPH-1 putative anti-sigma-28 factor FlgM YP_001561666.1 699440 D 398578 CDS YP_001561667.1 160896085 5746179 699837..700208 1 NC_010002.1 KEGG: vei:Veis_0572 hypothetical protein; hypothetical protein 700208 5746179 Daci_0636 Delftia acidovorans SPH-1 hypothetical protein YP_001561667.1 699837 D 398578 CDS YP_001561668.1 160896086 5746180 complement(700653..700982) 1 NC_010002.1 TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: aav:Aave_4396 flagellar hook-basal body complex subunit FliE; flagellar hook-basal body complex subunit FliE 700982 5746180 Daci_0637 Delftia acidovorans SPH-1 flagellar hook-basal body complex subunit FliE YP_001561668.1 700653 R 398578 CDS YP_001561669.1 160896087 5746181 701148..702848 1 NC_010002.1 TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring domain protein; KEGG: aav:Aave_4395 flagellar M-ring protein FliF; flagellar M-ring protein FliF 702848 5746181 Daci_0638 Delftia acidovorans SPH-1 flagellar M-ring protein FliF YP_001561669.1 701148 D 398578 CDS YP_001561670.1 160896088 5746182 702876..703871 1 NC_010002.1 PFAM: flagellar motor switch protein FliG; KEGG: aav:Aave_4394 flagellar motor switch protein FliG; flagellar motor switch protein FliG 703871 5746182 Daci_0639 Delftia acidovorans SPH-1 flagellar motor switch protein FliG YP_001561670.1 702876 D 398578 CDS YP_001561671.1 160896089 5746183 703864..704775 1 NC_010002.1 PFAM: flagellar assembly protein FliH; KEGG: aav:Aave_4393 flagellar assembly protein FliH; flagellar assembly protein FliH 704775 5746183 Daci_0640 Delftia acidovorans SPH-1 flagellar assembly protein FliH YP_001561671.1 703864 D 398578 CDS YP_001561672.1 160896090 5746184 704765..706207 1 NC_010002.1 KEGG: aav:Aave_4392 flagellar protein export ATPase FliI; TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; SMART: AAA ATPase; flagellar protein export ATPase FliI 706207 5746184 Daci_0641 Delftia acidovorans SPH-1 flagellar protein export ATPase FliI YP_001561672.1 704765 D 398578 CDS YP_001561673.1 160896091 5746185 706273..706737 1 NC_010002.1 TIGRFAM: flagellar export protein FliJ; KEGG: aav:Aave_4391 flagellar export protein FliJ; flagellar export protein FliJ 706737 5746185 Daci_0642 Delftia acidovorans SPH-1 flagellar export protein FliJ YP_001561673.1 706273 D 398578 CDS YP_001561674.1 160896092 5746186 706741..708252 1 NC_010002.1 PFAM: flagellar hook-length control protein; KEGG: ajs:Ajs_3802 flagellar hook-length control protein; flagellar hook-length control protein 708252 5746186 Daci_0643 Delftia acidovorans SPH-1 flagellar hook-length control protein YP_001561674.1 706741 D 398578 CDS YP_001561675.1 160896093 5746187 708506..709081 1 NC_010002.1 PFAM: flagellar basal body-associated protein FliL; KEGG: ajs:Ajs_3801 flagellar basal body-associated protein FliL; flagellar basal body-associated protein FliL 709081 5746187 Daci_0644 Delftia acidovorans SPH-1 flagellar basal body-associated protein FliL YP_001561675.1 708506 D 398578 CDS YP_001561676.1 160896094 5746188 709100..710104 1 NC_010002.1 PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: ajs:Ajs_3800 flagellar motor switch protein FliM; flagellar motor switch protein FliM 710104 5746188 Daci_0645 Delftia acidovorans SPH-1 flagellar motor switch protein FliM YP_001561676.1 709100 D 398578 CDS YP_001561677.1 160896095 5746189 710094..710525 1 NC_010002.1 TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: aav:Aave_4387 flagellar motor switch protein FliN; flagellar motor switch protein FliN 710525 5746189 Daci_0646 Delftia acidovorans SPH-1 flagellar motor switch protein FliN YP_001561677.1 710094 D 398578 CDS YP_001561678.1 160896096 5746190 710536..710871 1 NC_010002.1 PFAM: flagellar biosynthesis protein FliO; KEGG: ajs:Ajs_3798 flagellar biosynthesis protein, FliO; flagellar biosynthesis protein FliO 710871 5746190 Daci_0647 Delftia acidovorans SPH-1 flagellar biosynthesis protein FliO YP_001561678.1 710536 D 398578 CDS YP_001561679.1 160896097 5746191 710864..711649 1 NC_010002.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 711649 fliP 5746191 fliP Delftia acidovorans SPH-1 flagellar biosynthesis protein FliP YP_001561679.1 710864 D 398578 CDS YP_001561680.1 160896098 5746192 711677..711946 1 NC_010002.1 TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; KEGG: ajs:Ajs_3796 flagellar biosynthetic protein FliQ; flagellar biosynthetic protein FliQ 711946 5746192 Daci_0649 Delftia acidovorans SPH-1 flagellar biosynthetic protein FliQ YP_001561680.1 711677 D 398578 CDS YP_001561681.1 160896099 5746193 711976..712746 1 NC_010002.1 TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; KEGG: ajs:Ajs_3795 flagellar biosynthetic protein FliR; flagellar biosynthetic protein FliR 712746 5746193 Daci_0650 Delftia acidovorans SPH-1 flagellar biosynthetic protein FliR YP_001561681.1 711976 D 398578 CDS YP_001561682.1 160896100 5746194 complement(712795..713424) 1 NC_010002.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: aav:Aave_4382 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 713424 5746194 Daci_0651 Delftia acidovorans SPH-1 two component LuxR family transcriptional regulator YP_001561682.1 712795 R 398578 CDS YP_001561683.1 160896101 5746195 complement(713464..714612) 1 NC_010002.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: ajs:Ajs_3793 response regulator receiver sensor signal transduction histidine kinase; response regulator receiver sensor signal transduction histidine kinase 714612 5746195 Daci_0652 Delftia acidovorans SPH-1 response regulator receiver sensor signal transduction histidine kinase YP_001561683.1 713464 R 398578 CDS YP_001561684.1 160896102 5746196 714732..715178 1 NC_010002.1 KEGG: ajs:Ajs_3792 hypothetical protein; hypothetical protein 715178 5746196 Daci_0653 Delftia acidovorans SPH-1 hypothetical protein YP_001561684.1 714732 D 398578 CDS YP_001561685.1 160896103 5746197 715231..715593 1 NC_010002.1 PFAM: response regulator receiver; KEGG: vei:Veis_2177 response regulator receiver protein; response regulator receiver protein 715593 5746197 Daci_0654 Delftia acidovorans SPH-1 response regulator receiver protein YP_001561685.1 715231 D 398578 CDS YP_001561686.1 160896104 5746198 715633..717831 1 NC_010002.1 PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: aav:Aave_4378 CheA signal transduction histidine kinase; CheA signal transduction histidine kinase 717831 5746198 Daci_0655 Delftia acidovorans SPH-1 CheA signal transduction histidine kinase YP_001561686.1 715633 D 398578 CDS YP_001561687.1 160896105 5746199 717947..718435 1 NC_010002.1 PFAM: CheW domain protein; KEGG: vei:Veis_2175 putative CheW protein; CheW protein 718435 5746199 Daci_0656 Delftia acidovorans SPH-1 CheW protein YP_001561687.1 717947 D 398578 CDS YP_001561688.1 160896106 5746200 718462..719352 1 NC_010002.1 PFAM: MCP methyltransferase CheR-type; KEGG: rfr:Rfer_0569 MCP methyltransferase, CheR-type; CheR-type MCP methyltransferase 719352 5746200 Daci_0657 Delftia acidovorans SPH-1 CheR-type MCP methyltransferase YP_001561688.1 718462 D 398578 CDS YP_001561689.1 160896107 5746201 719386..720123 1 NC_010002.1 stimulates methylation of MCP proteins; catalyzes the conversion of glutamine residues to glutamate on methyl-accepting chemotaxis receptors; chemoreceptor glutamine deamidase CheD 720123 5746201 Daci_0658 Delftia acidovorans SPH-1 chemoreceptor glutamine deamidase CheD YP_001561689.1 719386 D 398578 CDS YP_001561690.1 160896108 5746202 720139..721272 1 NC_010002.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: aav:Aave_4374 response regulator receiver modulated CheB methylesterase; response regulator receiver modulated CheB methylesterase 721272 5746202 Daci_0659 Delftia acidovorans SPH-1 response regulator receiver modulated CheB methylesterase YP_001561690.1 720139 D 398578 CDS YP_001561691.1 160896109 5746203 complement(721348..723228) 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_3785 ABC transporter related; ABC transporter-like protein 723228 5746203 Daci_0660 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001561691.1 721348 R 398578 CDS YP_001561692.1 160896110 5746214 complement(734915..735682) 1 NC_010002.1 PFAM: glutamine amidotransferase class-II; KEGG: aav:Aave_0403 glutamine amidotransferase, class-II; class II glutamine amidotransferase 735682 5746214 Daci_0661 Delftia acidovorans SPH-1 class II glutamine amidotransferase YP_001561692.1 734915 R 398578 CDS YP_001561693.1 160896111 5746215 735923..736450 1 NC_010002.1 KEGG: bte:BTH_I2428 hypothetical protein; hypothetical protein 736450 5746215 Daci_0662 Delftia acidovorans SPH-1 hypothetical protein YP_001561693.1 735923 D 398578 CDS YP_001561694.1 160896112 5746216 complement(736514..736702) 1 NC_010002.1 4-OT; member of subfamily 5; forms a dimer; the function in the Escherichia coli cell is unknown; 4-oxalocrotonate tautomerase 736702 5746216 Daci_0663 Delftia acidovorans SPH-1 4-oxalocrotonate tautomerase YP_001561694.1 736514 R 398578 CDS YP_001561695.1 160896113 5746217 complement(736720..736974) 1 NC_010002.1 KEGG: aav:Aave_0406 hypothetical protein; hypothetical protein 736974 5746217 Daci_0664 Delftia acidovorans SPH-1 hypothetical protein YP_001561695.1 736720 R 398578 CDS YP_001561696.1 160896114 5746218 complement(737055..739247) 1 NC_010002.1 catalyzes the formation of malate from glyoxylate and acetyl-CoA; malate synthase G 739247 5746218 Daci_0665 Delftia acidovorans SPH-1 malate synthase G YP_001561696.1 737055 R 398578 CDS YP_001561697.1 160896115 5746219 739513..740487 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_0339 transcriptional regulator, LysR family; LysR family transcriptional regulator 740487 5746219 Daci_0666 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001561697.1 739513 D 398578 CDS YP_001561698.1 160896116 5746220 740516..741121 1 NC_010002.1 KEGG: aav:Aave_0410 hypothetical protein; hypothetical protein 741121 5746220 Daci_0667 Delftia acidovorans SPH-1 hypothetical protein YP_001561698.1 740516 D 398578 CDS YP_001561699.1 160896117 5746221 741229..741675 1 NC_010002.1 KEGG: aav:Aave_0412 putative transmembrane protein; putative transmembrane protein 741675 5746221 Daci_0668 Delftia acidovorans SPH-1 putative transmembrane protein YP_001561699.1 741229 D 398578 CDS YP_001561700.1 160896118 5746222 741730..743427 1 NC_010002.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 743427 argS 5746222 argS Delftia acidovorans SPH-1 arginyl-tRNA synthetase YP_001561700.1 741730 D 398578 CDS YP_001561701.1 160896119 5746223 743448..744137 1 NC_010002.1 PFAM: Sporulation domain protein; KEGG: aav:Aave_0415 sporulation domain protein; sporulation domain-containing protein 744137 5746223 Daci_0670 Delftia acidovorans SPH-1 sporulation domain-containing protein YP_001561701.1 743448 D 398578 CDS YP_001561702.1 160896120 5746224 744219..744869 1 NC_010002.1 PFAM: DSBA oxidoreductase; KEGG: ajs:Ajs_0345 DsbA oxidoreductase; DSBA oxidoreductase 744869 5746224 Daci_0671 Delftia acidovorans SPH-1 DSBA oxidoreductase YP_001561702.1 744219 D 398578 CDS YP_001561703.1 160896121 5746225 745017..745703 1 NC_010002.1 TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA family protein; KEGG: ajs:Ajs_0346 OstA family protein; lipopolysaccharide transport periplasmic protein LptA 745703 5746225 Daci_0672 Delftia acidovorans SPH-1 lipopolysaccharide transport periplasmic protein LptA YP_001561703.1 745017 D 398578 CDS YP_001561704.1 160896122 5746226 745700..746488 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_0418 ABC transporter-related protein; ABC transporter-like protein 746488 5746226 Daci_0673 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001561704.1 745700 D 398578 CDS YP_001561705.1 160896123 5746227 746543..748159 1 NC_010002.1 TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor; sigma-54 factor core-binding region; sigma-54 DNA-binding domain protein; KEGG: ajs:Ajs_0348 RNA polymerase, sigma 54 subunit, RpoN; RNA polymerase sigma 54 subunit RpoN 748159 5746227 Daci_0674 Delftia acidovorans SPH-1 RNA polymerase sigma 54 subunit RpoN YP_001561705.1 746543 D 398578 CDS YP_001561706.1 160896124 5746228 complement(748198..749805) 1 NC_010002.1 PFAM: sigma-54 factor interaction domain-containing protein; regulator of RNA terminal phosphate cyclase; SMART: AAA ATPase; KEGG: pna:Pnap_0497 regulator of RNA terminal phosphate cyclase; regulator of RNA terminal phosphate cyclase 749805 5746228 Daci_0675 Delftia acidovorans SPH-1 regulator of RNA terminal phosphate cyclase YP_001561706.1 748198 R 398578 CDS YP_001561707.1 160896125 5746230 750503..751642 1 NC_010002.1 PFAM: band 7 protein; KEGG: pol:Bpro_1471 band 7 protein; hypothetical protein 751642 5746230 Daci_0676 Delftia acidovorans SPH-1 hypothetical protein YP_001561707.1 750503 D 398578 CDS YP_001561708.1 160896126 5746231 751714..752559 1 NC_010002.1 KEGG: sdy:SDY_3647 hypothetical protein; hypothetical protein 752559 5746231 Daci_0677 Delftia acidovorans SPH-1 hypothetical protein YP_001561708.1 751714 D 398578 CDS YP_001561709.1 160896127 5746232 752592..753830 1 NC_010002.1 PFAM: protein of unknown function UPF0027; KEGG: pol:Bpro_1473 protein of unknown function UPF0027; hypothetical protein 753830 5746232 Daci_0678 Delftia acidovorans SPH-1 hypothetical protein YP_001561709.1 752592 D 398578 CDS YP_001561710.1 160896128 5746233 753989..754804 1 NC_010002.1 KEGG: bam:Bamb_5431 nucleotidyltransferase-like protein; nucleotidyltransferase-like protein 754804 5746233 Daci_0679 Delftia acidovorans SPH-1 nucleotidyltransferase-like protein YP_001561710.1 753989 D 398578 CDS YP_001561711.1 160896129 5746234 754814..755857 1 NC_010002.1 KEGG: pna:Pnap_0499 RNA-3'-phosphate cyclase; TIGRFAM: RNA 3'-phosphate cyclase; PFAM: RNA 3'-terminal phosphate cyclase; RNA 3'-phosphate cyclase 755857 5746234 Daci_0680 Delftia acidovorans SPH-1 RNA 3'-phosphate cyclase YP_001561711.1 754814 D 398578 CDS YP_001561712.1 160896130 5746235 complement(755864..756829) 1 NC_010002.1 TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: aav:Aave_0120 arginase; arginase 756829 5746235 Daci_0681 Delftia acidovorans SPH-1 arginase YP_001561712.1 755864 R 398578 CDS YP_001561713.1 160896131 5746236 complement(756847..757920) 1 NC_010002.1 catalyzes the formation of L-proline from L-ornithine; ornithine cyclodeaminase 757920 5746236 Daci_0682 Delftia acidovorans SPH-1 ornithine cyclodeaminase YP_001561713.1 756847 R 398578 CDS YP_001561714.1 160896132 5746237 758036..759316 1 NC_010002.1 PFAM: putative RNA methylase; THUMP domain protein; KEGG: aav:Aave_0422 putative RNA methylase; putative RNA methylase 759316 5746237 Daci_0683 Delftia acidovorans SPH-1 putative RNA methylase YP_001561714.1 758036 D 398578 CDS YP_001561715.1 160896133 5746238 759313..759801 1 NC_010002.1 KEGG: aav:Aave_0423 PilT protein domain protein; PilT domain-containing protein 759801 5746238 Daci_0684 Delftia acidovorans SPH-1 PilT domain-containing protein YP_001561715.1 759313 D 398578 CDS YP_001561716.1 160896134 5746239 759992..760309 1 NC_010002.1 PFAM: small multidrug resistance protein; KEGG: swi:Swit_3611 small multidrug resistance protein; small multidrug resistance protein 760309 5746239 Daci_0685 Delftia acidovorans SPH-1 small multidrug resistance protein YP_001561716.1 759992 D 398578 CDS YP_001561717.1 160896135 5746240 complement(760322..760873) 1 NC_010002.1 PFAM: GCN5-related N-acetyltransferase; KEGG: psa:PST_2696 IAA acetyltransferase; N-acetyltransferase GCN5 760873 5746240 Daci_0686 Delftia acidovorans SPH-1 N-acetyltransferase GCN5 YP_001561717.1 760322 R 398578 CDS YP_001561718.1 160896136 5746241 complement(761274..763658) 1 NC_010002.1 PFAM: ferredoxin; cytochrome P450; Oxidoreductase FAD-binding domain protein; KEGG: reu:Reut_B5278 ferredoxin:cytochrome P450:oxidoreductase FAD/NAD(P)-binding:oxidoreductase FAD-binding region; ferredoxin 763658 5746241 Daci_0687 Delftia acidovorans SPH-1 ferredoxin YP_001561718.1 761274 R 398578 CDS YP_001561719.1 160896137 5746242 complement(763686..764666) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: reh:H16_B1280 probable extra-cytoplasmic solute receptor; hypothetical protein 764666 5746242 Daci_0688 Delftia acidovorans SPH-1 hypothetical protein YP_001561719.1 763686 R 398578 CDS YP_001561720.1 160896138 5746243 764827..765651 1 NC_010002.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: reu:Reut_B5276 regulatory protein, IclR; IclR family transcriptional regulator 765651 5746243 Daci_0689 Delftia acidovorans SPH-1 IclR family transcriptional regulator YP_001561720.1 764827 D 398578 CDS YP_001561721.1 160896139 5746244 complement(765693..766709) 1 NC_010002.1 KEGG: aav:Aave_0425 hypothetical protein; hypothetical protein 766709 5746244 Daci_0690 Delftia acidovorans SPH-1 hypothetical protein YP_001561721.1 765693 R 398578 CDS YP_001561722.1 160896140 5746245 766712..767494 1 NC_010002.1 PFAM: regulatory protein IclR; KEGG: ajs:Ajs_0111 regulatory proteins, IclR; IclR family transcriptional regulator 767494 5746245 Daci_0691 Delftia acidovorans SPH-1 IclR family transcriptional regulator YP_001561722.1 766712 D 398578 CDS YP_001561723.1 160896141 5746246 complement(767496..768620) 1 NC_010002.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: ajs:Ajs_0112 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 768620 5746246 Daci_0692 Delftia acidovorans SPH-1 L-carnitine dehydratase/bile acid-inducible protein F YP_001561723.1 767496 R 398578 CDS YP_001561724.1 160896142 5746247 complement(768642..769604) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0108 uncharacterized protein UPF0065; hypothetical protein 769604 5746247 Daci_0693 Delftia acidovorans SPH-1 hypothetical protein YP_001561724.1 768642 R 398578 CDS YP_001561725.1 160896143 5746248 complement(769645..770424) 1 NC_010002.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ajs:Ajs_0106 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 770424 5746248 Daci_0694 Delftia acidovorans SPH-1 short-chain dehydrogenase/reductase SDR YP_001561725.1 769645 R 398578 CDS YP_001561726.1 160896144 5746249 complement(770447..771625) 1 NC_010002.1 TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: ajs:Ajs_0105 acetyl-CoA acetyltransferases; acetyl-CoA acetyltransferase 771625 5746249 Daci_0695 Delftia acidovorans SPH-1 acetyl-CoA acetyltransferase YP_001561726.1 770447 R 398578 CDS YP_001561727.1 160896145 5746250 771789..773354 1 NC_010002.1 PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_0104 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 773354 5746250 Daci_0696 Delftia acidovorans SPH-1 AMP-dependent synthetase/ligase YP_001561727.1 771789 D 398578 CDS YP_001561728.1 160896146 5746251 773403..774545 1 NC_010002.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_0103 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 774545 5746251 Daci_0697 Delftia acidovorans SPH-1 acyl-CoA dehydrogenase domain-containing protein YP_001561728.1 773403 D 398578 CDS YP_001561729.1 160896147 5746252 774815..777193 1 NC_010002.1 TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; KEGG: aav:Aave_3486 rhs element Vgr protein; ImpA family type VI secretion-associated protein 777193 5746252 Daci_0698 Delftia acidovorans SPH-1 ImpA family type VI secretion-associated protein YP_001561729.1 774815 D 398578 CDS YP_001561730.1 160896148 5746253 777209..777550 1 NC_010002.1 PFAM: PAAR repeat-containing protein; KEGG: ppr:PBPRA3102 hypothetical protein; PAAR repeat-containing protein 777550 5746253 Daci_0699 Delftia acidovorans SPH-1 PAAR repeat-containing protein YP_001561730.1 777209 D 398578 CDS YP_001561731.1 160896149 5746254 777557..778165 1 NC_010002.1 KEGG: mxa:MXAN_4169 hypothetical protein; hypothetical protein 778165 5746254 Daci_0700 Delftia acidovorans SPH-1 hypothetical protein YP_001561731.1 777557 D 398578 CDS YP_001561732.1 160896150 5746255 778162..778566 1 NC_010002.1 hypothetical protein 778566 5746255 Daci_0701 Delftia acidovorans SPH-1 hypothetical protein YP_001561732.1 778162 D 398578 CDS YP_001561733.1 160896151 5746256 778563..779318 1 NC_010002.1 KEGG: bps:BPSS1058 bacteriophage GP30 protein; hypothetical protein 779318 5746256 Daci_0702 Delftia acidovorans SPH-1 hypothetical protein YP_001561733.1 778563 D 398578 CDS YP_001561734.1 160896152 5746257 779351..780445 1 NC_010002.1 hypothetical protein 780445 5746257 Daci_0703 Delftia acidovorans SPH-1 hypothetical protein YP_001561734.1 779351 D 398578 CDS YP_001561735.1 160896153 5746258 780465..781574 1 NC_010002.1 KEGG: mxa:MXAN_6136 hypothetical protein; hypothetical protein 781574 5746258 Daci_0704 Delftia acidovorans SPH-1 hypothetical protein YP_001561735.1 780465 D 398578 CDS YP_001561736.1 160896154 5746259 781575..782108 1 NC_010002.1 KEGG: aav:Aave_4007 hypothetical protein; hypothetical protein 782108 5746259 Daci_0705 Delftia acidovorans SPH-1 hypothetical protein YP_001561736.1 781575 D 398578 CDS YP_001561737.1 160896155 5746260 782147..783091 1 NC_010002.1 TIGRFAM: yecA family protein; PFAM: SEC-C motif domain protein; KEGG: reu:Reut_B5710 sec-C motif; yecA family protein 783091 5746260 Daci_0706 Delftia acidovorans SPH-1 yecA family protein YP_001561737.1 782147 D 398578 CDS YP_001561738.1 160896156 5746261 783125..783439 1 NC_010002.1 PFAM: helix-turn-helix domain protein; KEGG: gur:Gura_0591 transcriptional regulator, XRE family; XRE family transcriptional regulator 783439 5746261 Daci_0707 Delftia acidovorans SPH-1 XRE family transcriptional regulator YP_001561738.1 783125 D 398578 CDS YP_001561739.1 160896157 5746262 complement(783420..783911) 1 NC_010002.1 PFAM: CinA domain protein; KEGG: ajs:Ajs_0354 CinA domain protein; CinA domain-containing protein 783911 5746262 Daci_0708 Delftia acidovorans SPH-1 CinA domain-containing protein YP_001561739.1 783420 R 398578 CDS YP_001561740.1 160896158 5746263 complement(783922..784422) 1 NC_010002.1 PFAM: phosphatidylglycerophosphatase A; KEGG: ajs:Ajs_0355 phosphatidylglycerophosphatase A; phosphatidylglycerophosphatase A 784422 5746263 Daci_0709 Delftia acidovorans SPH-1 phosphatidylglycerophosphatase A YP_001561740.1 783922 R 398578 CDS YP_001561741.1 160896159 5746264 complement(784553..786205) 1 NC_010002.1 KEGG: aav:Aave_0431 hypothetical protein; hypothetical protein 786205 5746264 Daci_0710 Delftia acidovorans SPH-1 hypothetical protein YP_001561741.1 784553 R 398578 CDS YP_001561742.1 160896160 5746265 complement(786244..787209) 1 NC_010002.1 KEGG: pol:Bpro_4471 thiamine-monophosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein domain protein; thiamine-monophosphate kinase 787209 5746265 Daci_0711 Delftia acidovorans SPH-1 thiamine-monophosphate kinase YP_001561742.1 786244 R 398578 CDS YP_001561743.1 160896161 5746266 complement(787275..788174) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_1817 transcriptional regulator, LysR family; LysR family transcriptional regulator 788174 5746266 Daci_0712 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001561743.1 787275 R 398578 CDS YP_001561744.1 160896162 5746267 788245..789693 1 NC_010002.1 PFAM: protein of unknown function DUF1446; KEGG: ajs:Ajs_1818 protein of unknown function DUF1446; hypothetical protein 789693 5746267 Daci_0713 Delftia acidovorans SPH-1 hypothetical protein YP_001561744.1 788245 D 398578 CDS YP_001561745.1 160896163 5746268 789690..790061 1 NC_010002.1 KEGG: ajs:Ajs_1819 hypothetical protein; hypothetical protein 790061 5746268 Daci_0714 Delftia acidovorans SPH-1 hypothetical protein YP_001561745.1 789690 D 398578 CDS YP_001561746.1 160896164 5746269 790110..791093 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_1820 uncharacterized protein UPF0065; hypothetical protein 791093 5746269 Daci_0715 Delftia acidovorans SPH-1 hypothetical protein YP_001561746.1 790110 D 398578 CDS YP_001561747.1 160896165 5746270 791202..793322 1 NC_010002.1 KEGG: aav:Aave_3389 hypothetical protein; hypothetical protein 793322 5746270 Daci_0716 Delftia acidovorans SPH-1 hypothetical protein YP_001561747.1 791202 D 398578 CDS YP_001561748.1 160896166 5746271 complement(793385..794131) 1 NC_010002.1 hypothetical protein 794131 5746271 Daci_0717 Delftia acidovorans SPH-1 hypothetical protein YP_001561748.1 793385 R 398578 CDS YP_001561749.1 160896167 5746272 complement(794485..795615) 1 NC_010002.1 ATP-dependent; carboxylate-amine ligase with weak glutamate--cysteine ligase activity; carboxylate-amine ligase 795615 5746272 Daci_0718 Delftia acidovorans SPH-1 carboxylate-amine ligase YP_001561749.1 794485 R 398578 CDS YP_001561750.1 160896168 5746273 complement(795599..796861) 1 NC_010002.1 PFAM: sodium/hydrogen exchanger; KEGG: aav:Aave_0435 sodium/hydrogen exchanger; sodium/hydrogen exchanger 796861 5746273 Daci_0719 Delftia acidovorans SPH-1 sodium/hydrogen exchanger YP_001561750.1 795599 R 398578 CDS YP_001561751.1 160896169 5746274 complement(797060..799027) 1 NC_010002.1 KEGG: ajs:Ajs_0359 putative site-specific recombinase transmembrane protein; putative site-specific recombinase transmembrane protein 799027 5746274 Daci_0720 Delftia acidovorans SPH-1 putative site-specific recombinase transmembrane protein YP_001561751.1 797060 R 398578 CDS YP_001561752.1 160896170 5746275 complement(799080..799550) 1 NC_010002.1 protein associated with Co2+ and Mg2+ efflux; ApaG protein 799550 apaG 5746275 apaG Delftia acidovorans SPH-1 ApaG protein YP_001561752.1 799080 R 398578 CDS YP_001561753.1 160896171 5746276 799604..800287 1 NC_010002.1 PFAM: ribulose-phosphate 3-epimerase; KEGG: ajs:Ajs_0361 ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase 800287 5746276 Daci_0722 Delftia acidovorans SPH-1 ribulose-phosphate 3-epimerase YP_001561753.1 799604 D 398578 CDS YP_001561754.1 160896172 5746277 complement(800355..800681) 1 NC_010002.1 hypothetical protein 800681 5746277 Daci_0723 Delftia acidovorans SPH-1 hypothetical protein YP_001561754.1 800355 R 398578 CDS YP_001561755.1 160896173 5746278 complement(800841..801887) 1 NC_010002.1 KEGG: vei:Veis_4644 porin, gram-negative type; porin 801887 5746278 Daci_0724 Delftia acidovorans SPH-1 porin YP_001561755.1 800841 R 398578 CDS YP_001561756.1 160896174 5746279 802253..803788 1 NC_010002.1 PFAM: Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein 803788 5746279 Daci_0725 Delftia acidovorans SPH-1 Sel1 domain-containing protein YP_001561756.1 802253 D 398578 CDS YP_001561757.1 160896175 5746280 803822..804514 1 NC_010002.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pfo:Pfl_3855 two component heavy metal response transcriptional regulator, winged helix family; two component transcriptional regulator 804514 5746280 Daci_0726 Delftia acidovorans SPH-1 two component transcriptional regulator YP_001561757.1 803822 D 398578 CDS YP_001561758.1 160896176 5746281 complement(804567..805574) 1 NC_010002.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: pol:Bpro_1462 transketolase, central region; transketolase central region 805574 5746281 Daci_0727 Delftia acidovorans SPH-1 transketolase central region YP_001561758.1 804567 R 398578 CDS YP_001561759.1 160896177 5746282 complement(805571..806431) 1 NC_010002.1 PFAM: Transketolase domain protein; KEGG: pol:Bpro_1461 transketolase-like; transketolase domain-containing protein 806431 5746282 Daci_0728 Delftia acidovorans SPH-1 transketolase domain-containing protein YP_001561759.1 805571 R 398578 CDS YP_001561760.1 160896178 5746283 complement(806465..807724) 1 NC_010002.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pol:Bpro_1457 TRAP dicarboxylate transporter-DctM subunit; TRAP dicarboxylate transporter subunit DctM 807724 5746283 Daci_0729 Delftia acidovorans SPH-1 TRAP dicarboxylate transporter subunit DctM YP_001561760.1 806465 R 398578 CDS YP_001561761.1 160896179 5746284 complement(807738..808292) 1 NC_010002.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: pol:Bpro_1456 tripartite ATP-independent periplasmic transporter, DctQ component; tripartite ATP-independent periplasmic transporter DctQ 808292 5746284 Daci_0730 Delftia acidovorans SPH-1 tripartite ATP-independent periplasmic transporter DctQ YP_001561761.1 807738 R 398578 CDS YP_001561762.1 160896180 5746285 complement(808310..809296) 1 NC_010002.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: pol:Bpro_1455 TRAP dicarboxylate transporter, DctP subunit; TRAP dicarboxylate transporter subunit DctP 809296 5746285 Daci_0731 Delftia acidovorans SPH-1 TRAP dicarboxylate transporter subunit DctP YP_001561762.1 808310 R 398578 CDS YP_001561763.1 160896181 5746286 complement(809359..810108) 1 NC_010002.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pol:Bpro_1454 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 810108 5746286 Daci_0732 Delftia acidovorans SPH-1 short-chain dehydrogenase/reductase SDR YP_001561763.1 809359 R 398578 CDS YP_001561764.1 160896182 5746287 810213..811184 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pol:Bpro_1453 transcriptional regulator, LysR family; LysR family transcriptional regulator 811184 5746287 Daci_0733 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001561764.1 810213 D 398578 CDS YP_001561765.1 160896183 5746288 811382..814027 1 NC_010002.1 KEGG: cvi:CV_2953 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 814027 5746288 Daci_0734 Delftia acidovorans SPH-1 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_001561765.1 811382 D 398578 CDS YP_001561766.1 160896184 5746289 complement(814072..816597) 1 NC_010002.1 KEGG: aav:Aave_2236 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase 816597 5746289 Daci_0735 Delftia acidovorans SPH-1 PAS/PAC sensor signal transduction histidine kinase YP_001561766.1 814072 R 398578 CDS YP_001561767.1 160896185 5746290 complement(816628..817467) 1 NC_010002.1 PFAM: extracellular solute-binding protein family 3; KEGG: azo:azo0499 putative cyclohexadienyl dehydratase; extracellular solute-binding protein 817467 5746290 Daci_0736 Delftia acidovorans SPH-1 extracellular solute-binding protein YP_001561767.1 816628 R 398578 CDS YP_001561768.1 160896186 5746291 complement(817477..818241) 1 NC_010002.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: shw:Sputw3181_0802 response regulator receiver modulated metal dependent phosphohydrolase; metal dependent phosphohydrolase 818241 5746291 Daci_0737 Delftia acidovorans SPH-1 metal dependent phosphohydrolase YP_001561768.1 817477 R 398578 CDS YP_001561769.1 160896187 5746292 complement(818241..818612) 1 NC_010002.1 PFAM: response regulator receiver; KEGG: aav:Aave_2238 response regulator receiver protein; response regulator receiver protein 818612 5746292 Daci_0738 Delftia acidovorans SPH-1 response regulator receiver protein YP_001561769.1 818241 R 398578 CDS YP_001561770.1 160896188 5746293 complement(818881..820116) 1 NC_010002.1 KEGG: aav:Aave_0592 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase 820116 5746293 Daci_0739 Delftia acidovorans SPH-1 metal dependent phosphohydrolase YP_001561770.1 818881 R 398578 CDS YP_001561771.1 160896189 5746294 complement(820191..821888) 1 NC_010002.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bvi:Bcep1808_5173 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 821888 5746294 Daci_0740 Delftia acidovorans SPH-1 methyl-accepting chemotaxis sensory transducer YP_001561771.1 820191 R 398578 CDS YP_001561772.1 160896190 5746295 822221..822703 1 NC_010002.1 PFAM: CheW domain protein; KEGG: rfr:Rfer_0924 CheW protein; CheW protein 822703 5746295 Daci_0741 Delftia acidovorans SPH-1 CheW protein YP_001561772.1 822221 D 398578 CDS YP_001561773.1 160896191 5746296 822775..824520 1 NC_010002.1 PFAM: chemotaxis sensory transducer; KEGG: bte:BTH_I2374 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 824520 5746296 Daci_0742 Delftia acidovorans SPH-1 methyl-accepting chemotaxis sensory transducer YP_001561773.1 822775 D 398578 CDS YP_001561774.1 160896192 5746297 824673..825350 1 NC_010002.1 TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ajs:Ajs_0363 phosphoglycolate phosphatase; phosphoglycolate phosphatase 825350 5746297 Daci_0743 Delftia acidovorans SPH-1 phosphoglycolate phosphatase YP_001561774.1 824673 D 398578 CDS YP_001561775.1 160896193 5746298 825503..826798 1 NC_010002.1 catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase 826798 5746298 Daci_0744 Delftia acidovorans SPH-1 spermidine synthase YP_001561775.1 825503 D 398578 CDS YP_001561776.1 160896194 5746299 827142..827735 1 NC_010002.1 KEGG: aav:Aave_2543 hypothetical protein; hypothetical protein 827735 5746299 Daci_0745 Delftia acidovorans SPH-1 hypothetical protein YP_001561776.1 827142 D 398578 CDS YP_001561777.1 160896195 5746300 828300..829070 1 NC_010002.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bch:Bcen2424_3439 two component transcriptional regulator, winged helix family; two component transcriptional regulator 829070 5746300 Daci_0746 Delftia acidovorans SPH-1 two component transcriptional regulator YP_001561777.1 828300 D 398578 CDS YP_001561778.1 160896196 5746301 829039..830454 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bch:Bcen2424_3440 periplasmic sensor signal transduction histidine kinase; histidine kinase 830454 5746301 Daci_0747 Delftia acidovorans SPH-1 histidine kinase YP_001561778.1 829039 D 398578 CDS YP_001561779.1 160896197 5746302 complement(830429..831025) 1 NC_010002.1 KEGG: ajs:Ajs_0365 putative lipoprotein transmembrane; putative lipoprotein transmembrane 831025 5746302 Daci_0748 Delftia acidovorans SPH-1 putative lipoprotein transmembrane YP_001561779.1 830429 R 398578 CDS YP_001561780.1 160896198 5746303 complement(831389..832369) 1 NC_010002.1 PFAM: Patatin; KEGG: swi:Swit_5143 patatin; patatin 832369 5746303 Daci_0749 Delftia acidovorans SPH-1 patatin YP_001561780.1 831389 R 398578 CDS YP_001561781.1 160896199 5746304 complement(832369..832818) 1 NC_010002.1 hypothetical protein 832818 5746304 Daci_0750 Delftia acidovorans SPH-1 hypothetical protein YP_001561781.1 832369 R 398578 CDS YP_001561782.1 160896200 5746305 complement(832815..833210) 1 NC_010002.1 hypothetical protein 833210 5746305 Daci_0751 Delftia acidovorans SPH-1 hypothetical protein YP_001561782.1 832815 R 398578 CDS YP_001561783.1 160896201 5746306 833568..835067 1 NC_010002.1 with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I 835067 5746306 Daci_0752 Delftia acidovorans SPH-1 anthranilate synthase component I YP_001561783.1 833568 D 398578 CDS YP_001561784.1 160896202 5746307 835064..835414 1 NC_010002.1 PFAM: Chorismate mutase; KEGG: aav:Aave_0443 chorismate mutase; chorismate mutase 835414 5746307 Daci_0753 Delftia acidovorans SPH-1 chorismate mutase YP_001561784.1 835064 D 398578 CDS YP_001561785.1 160896203 5746308 complement(835411..836643) 1 NC_010002.1 TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: pla:Plav_3453 acetate kinase; acetate kinase 836643 5746308 Daci_0754 Delftia acidovorans SPH-1 acetate kinase YP_001561785.1 835411 R 398578 CDS YP_001561786.1 160896204 5746309 complement(836640..838118) 1 NC_010002.1 PFAM: phosphate acetyl/butaryl transferase; MaoC domain protein dehydratase; KEGG: pla:Plav_3451 phosphate butyryltransferase; bifunctional enoyl-CoA hydratase/phosphate acetyltransferase 838118 5746309 Daci_0755 Delftia acidovorans SPH-1 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase YP_001561786.1 836640 R 398578 CDS YP_001561787.1 160896205 5746310 complement(838115..840574) 1 NC_010002.1 KEGG: pla:Plav_3450 hypothetical protein; hypothetical protein 840574 5746310 Daci_0756 Delftia acidovorans SPH-1 hypothetical protein YP_001561787.1 838115 R 398578 CDS YP_001561788.1 160896206 5746311 complement(840712..841221) 1 NC_010002.1 KEGG: pla:Plav_3448 hypothetical protein; hypothetical protein 841221 5746311 Daci_0757 Delftia acidovorans SPH-1 hypothetical protein YP_001561788.1 840712 R 398578 CDS YP_001561789.1 160896207 5746312 complement(841275..842405) 1 NC_010002.1 PFAM: ABC-2 type transporter; KEGG: pla:Plav_3447 ABC-2 type transporter; ABC-2 type transporter 842405 5746312 Daci_0758 Delftia acidovorans SPH-1 ABC-2 type transporter YP_001561789.1 841275 R 398578 CDS YP_001561790.1 160896208 5746313 complement(842407..845163) 1 NC_010002.1 PFAM: ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase; KEGG: ajs:Ajs_2361 ABC transporter related; ABC transporter-like protein 845163 5746313 Daci_0759 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001561790.1 842407 R 398578 CDS YP_001561791.1 160896209 5746314 complement(845160..846251) 1 NC_010002.1 PFAM: secretion protein HlyD family protein; KEGG: pla:Plav_3445 secretion protein HlyD family protein; secretion protein HlyD family protein 846251 5746314 Daci_0760 Delftia acidovorans SPH-1 secretion protein HlyD family protein YP_001561791.1 845160 R 398578 CDS YP_001561792.1 160896210 5746315 complement(846269..847744) 1 NC_010002.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: pla:Plav_3444 RND efflux system, outer membrane lipoprotein, NodT family; RND efflux system outer membrane lipoprotein 847744 5746315 Daci_0761 Delftia acidovorans SPH-1 RND efflux system outer membrane lipoprotein YP_001561792.1 846269 R 398578 CDS YP_001561793.1 160896211 5746316 complement(847778..848545) 1 NC_010002.1 Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-(acyl carrier protein) reductase 848545 5746316 Daci_0762 Delftia acidovorans SPH-1 enoyl-(acyl carrier protein) reductase YP_001561793.1 847778 R 398578 CDS YP_001561794.1 160896212 5746317 849107..850603 1 NC_010002.1 KEGG: mms:mma_1885 hypothetical protein; hypothetical protein 850603 5746317 Daci_0763 Delftia acidovorans SPH-1 hypothetical protein YP_001561794.1 849107 D 398578 CDS YP_001561795.1 160896213 5746318 850799..851911 1 NC_010002.1 KEGG: fra:Francci3_2920 hypothetical protein; hypothetical protein 851911 5746318 Daci_0764 Delftia acidovorans SPH-1 hypothetical protein YP_001561795.1 850799 D 398578 CDS YP_001561796.1 160896214 5746319 851934..853178 1 NC_010002.1 PFAM: toxic anion resistance family protein; KEGG: prw:PsycPRwf_2138 toxic anion resistance family protein; toxic anion resistance family protein 853178 5746319 Daci_0765 Delftia acidovorans SPH-1 toxic anion resistance family protein YP_001561796.1 851934 D 398578 CDS YP_001561797.1 160896215 5746320 853181..854791 1 NC_010002.1 PFAM: von Willebrand factor type A; KEGG: fra:Francci3_2918 von Willebrand factor, type A; von Willebrand factor type A 854791 5746320 Daci_0766 Delftia acidovorans SPH-1 von Willebrand factor type A YP_001561797.1 853181 D 398578 CDS YP_001561798.1 160896216 5746321 854820..855443 1 NC_010002.1 KEGG: mca:MCA1631 hypothetical protein; hypothetical protein 855443 5746321 Daci_0767 Delftia acidovorans SPH-1 hypothetical protein YP_001561798.1 854820 D 398578 CDS YP_001561799.1 160896217 5746322 855842..856429 1 NC_010002.1 TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: pna:Pnap_3652 glutamine amidotransferase of anthranilate synthase; glutamine amidotransferase of anthranilate synthase 856429 5746322 Daci_0768 Delftia acidovorans SPH-1 glutamine amidotransferase of anthranilate synthase YP_001561799.1 855842 D 398578 CDS YP_001561800.1 160896218 5746323 856458..857492 1 NC_010002.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 857492 trpD 5746323 trpD Delftia acidovorans SPH-1 anthranilate phosphoribosyltransferase YP_001561800.1 856458 D 398578 CDS YP_001561801.1 160896219 5746324 857543..858346 1 NC_010002.1 involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; indole-3-glycerol-phosphate synthase 858346 trpC 5746324 trpC Delftia acidovorans SPH-1 indole-3-glycerol-phosphate synthase YP_001561801.1 857543 D 398578 CDS YP_001561802.1 160896220 5746325 858532..859278 1 NC_010002.1 KEGG: bja:bll6026 probable outer membrane protein B; putative outer membrane protein B 859278 5746325 Daci_0771 Delftia acidovorans SPH-1 putative outer membrane protein B YP_001561802.1 858532 D 398578 CDS YP_001561803.1 160896221 5746326 859297..860790 1 NC_010002.1 PFAM: Fibronectin type III domain protein; KEGG: aav:Aave_4710 ubiquitin; fibronectin type III domain-containing protein 860790 5746326 Daci_0772 Delftia acidovorans SPH-1 fibronectin type III domain-containing protein YP_001561803.1 859297 D 398578 CDS YP_001561804.1 160896222 5746327 860855..861679 1 NC_010002.1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 861679 5746327 Daci_0773 Delftia acidovorans SPH-1 uracil-DNA glycosylase YP_001561804.1 860855 D 398578 CDS YP_001561805.1 160896223 5746328 complement(861673..863706) 1 NC_010002.1 PFAM: beta-lactamase domain protein; KEGG: rme:Rmet_2149 beta-lactamase-like protein; beta-lactamase domain-containing protein 863706 5746328 Daci_0774 Delftia acidovorans SPH-1 beta-lactamase domain-containing protein YP_001561805.1 861673 R 398578 CDS YP_001561806.1 160896224 5746329 863796..864509 1 NC_010002.1 PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: aav:Aave_2665 transcriptional regulator, Crp/Fnr family; Crp/FNR family transcriptional regulator 864509 5746329 Daci_0775 Delftia acidovorans SPH-1 Crp/FNR family transcriptional regulator YP_001561806.1 863796 D 398578 CDS YP_001561807.1 160896225 5746330 complement(864694..865242) 1 NC_010002.1 PFAM: protein of unknown function ATP binding; Miro domain protein; KEGG: nmc:NMC1671 hypothetical protein; hypothetical protein 865242 5746330 Daci_0776 Delftia acidovorans SPH-1 hypothetical protein YP_001561807.1 864694 R 398578 CDS YP_001561808.1 160896226 5746331 complement(865235..865894) 1 NC_010002.1 hypothetical protein 865894 5746331 Daci_0777 Delftia acidovorans SPH-1 hypothetical protein YP_001561808.1 865235 R 398578 CDS YP_001561809.1 160896227 5746332 complement(866348..867268) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: vei:Veis_0178 transcriptional regulator, LysR family; LysR family transcriptional regulator 867268 5746332 Daci_0778 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001561809.1 866348 R 398578 CDS YP_001561810.1 160896228 5746333 867422..868429 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: vei:Veis_0179 uncharacterized protein UPF0065; hypothetical protein 868429 5746333 Daci_0779 Delftia acidovorans SPH-1 hypothetical protein YP_001561810.1 867422 D 398578 CDS YP_001561811.1 160896229 5746334 868492..870198 1 NC_010002.1 PFAM: gamma-glutamyltranspeptidase; KEGG: aav:Aave_0589 gamma-glutamyltransferase; gamma-glutamyltransferase 870198 5746334 Daci_0780 Delftia acidovorans SPH-1 gamma-glutamyltransferase YP_001561811.1 868492 D 398578 CDS YP_001561812.1 160896230 5746335 complement(870221..870862) 1 NC_010002.1 KEGG: rha:RHA1_ro03885 hypothetical protein; hypothetical protein 870862 5746335 Daci_0781 Delftia acidovorans SPH-1 hypothetical protein YP_001561812.1 870221 R 398578 CDS YP_001561813.1 160896231 5746336 complement(870859..871728) 1 NC_010002.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: vei:Veis_3271 xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein 871728 5746336 Daci_0782 Delftia acidovorans SPH-1 xylose isomerase domain-containing protein YP_001561813.1 870859 R 398578 CDS YP_001561814.1 160896232 5746337 complement(871725..872762) 1 NC_010002.1 PFAM: inner-membrane translocator; KEGG: ypi:YpsIP31758_3268 carbohydrate uptake ABC transporter 2 (CUT2) family, permease protein; monosaccharide-transporting ATPase 872762 5746337 Daci_0783 Delftia acidovorans SPH-1 monosaccharide-transporting ATPase YP_001561814.1 871725 R 398578 CDS YP_001561815.1 160896233 5746338 complement(872759..873793) 1 NC_010002.1 PFAM: inner-membrane translocator; KEGG: rle:pRL120193 putative permease component of ABC transporter; monosaccharide-transporting ATPase 873793 5746338 Daci_0784 Delftia acidovorans SPH-1 monosaccharide-transporting ATPase YP_001561815.1 872759 R 398578 CDS YP_001561816.1 160896234 5746339 complement(873786..875285) 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rle:pRL80086 putative ATP-binding component of ABC transporter; ABC transporter-like protein 875285 5746339 Daci_0785 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001561816.1 873786 R 398578 CDS YP_001561817.1 160896235 5746340 complement(875299..876288) 1 NC_010002.1 KEGG: sme:SMb20484 putative ABC transporter periplasmic sugar-binding protein; putative ABC transporter periplasmic sugar-binding protein 876288 5746340 Daci_0786 Delftia acidovorans SPH-1 putative ABC transporter periplasmic sugar-binding protein YP_001561817.1 875299 R 398578 CDS YP_001561818.1 160896236 5746341 876355..877482 1 NC_010002.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: rsh:Rsph17029_3435 regulatory protein, LacI; LacI family transcriptional regulator 877482 5746341 Daci_0787 Delftia acidovorans SPH-1 LacI family transcriptional regulator YP_001561818.1 876355 D 398578 CDS YP_001561819.1 160896237 5746342 complement(877704..878708) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bte:BTH_II0814 transcriptional regulator, LysR family; LysR family transcriptional regulator 878708 5746342 Daci_0788 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001561819.1 877704 R 398578 CDS YP_001561820.1 160896238 5746343 878712..880007 1 NC_010002.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: bpl:BURPS1106A_A2112 dehydrogenase, FMN-dependent family; FMN-dependent alpha-hydroxy acid dehydrogenase 880007 5746343 Daci_0789 Delftia acidovorans SPH-1 FMN-dependent alpha-hydroxy acid dehydrogenase YP_001561820.1 878712 D 398578 CDS YP_001561821.1 160896239 5746344 880059..881045 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: aav:Aave_1312 uncharacterized protein UPF0065; hypothetical protein 881045 5746344 Daci_0790 Delftia acidovorans SPH-1 hypothetical protein YP_001561821.1 880059 D 398578 CDS YP_001561822.1 160896240 5746345 881183..881686 1 NC_010002.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: pol:Bpro_2923 alkylhydroperoxidase AhpD core; alkylhydroperoxidase 881686 5746345 Daci_0791 Delftia acidovorans SPH-1 alkylhydroperoxidase YP_001561822.1 881183 D 398578 CDS YP_001561823.1 160896241 5746346 complement(881702..882682) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_4073 uncharacterized protein UPF0065; hypothetical protein 882682 5746346 Daci_0792 Delftia acidovorans SPH-1 hypothetical protein YP_001561823.1 881702 R 398578 CDS YP_001561824.1 160896242 5746347 complement(882725..883936) 1 NC_010002.1 TIGRFAM: CitB domain protein; KEGG: ajs:Ajs_4071 CitB domain protein; CitB domain-containing protein 883936 5746347 Daci_0793 Delftia acidovorans SPH-1 CitB domain-containing protein YP_001561824.1 882725 R 398578 CDS YP_001561825.1 160896243 5746348 complement(883933..885357) 1 NC_010002.1 catalyzes the oxidation of tricarballylate to cis-aconitate; FAD-dependent; required for the utilization of tricarballylate as a carbon and energy source by S. enterica; tricarballylate dehydrogenase 885357 5746348 Daci_0794 Delftia acidovorans SPH-1 tricarballylate dehydrogenase YP_001561825.1 883933 R 398578 CDS YP_001561826.1 160896244 5746349 complement(885445..886407) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_4069 transcriptional regulator, LysR family; LysR family transcriptional regulator 886407 5746349 Daci_0795 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001561826.1 885445 R 398578 CDS YP_001561827.1 160896245 5746350 complement(886464..887270) 1 NC_010002.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: rme:Rmet_5383 transcriptional regulator, IclR family; IclR family transcriptional regulator 887270 5746350 Daci_0796 Delftia acidovorans SPH-1 IclR family transcriptional regulator YP_001561827.1 886464 R 398578 CDS YP_001561828.1 160896246 5746351 887291..888451 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: rme:Rmet_5382 uncharacterized protein UPF0065; hypothetical protein 888451 5746351 Daci_0797 Delftia acidovorans SPH-1 hypothetical protein YP_001561828.1 887291 D 398578 CDS YP_001561829.1 160896247 5746352 888508..890007 1 NC_010002.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rme:Rmet_5381 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 890007 5746352 Daci_0798 Delftia acidovorans SPH-1 AMP-dependent synthetase/ligase YP_001561829.1 888508 D 398578 CDS YP_001561830.1 160896248 5746353 890039..890824 1 NC_010002.1 KEGG: rme:Rmet_5380 hypothetical protein; citrate synthase 890824 5746353 Daci_0799 Delftia acidovorans SPH-1 citrate synthase YP_001561830.1 890039 D 398578 CDS YP_001561831.1 160896249 5746354 890864..892039 1 NC_010002.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bbr:BB1217 hypothetical protein; L-carnitine dehydratase/bile acid-inducible protein F 892039 5746354 Daci_0800 Delftia acidovorans SPH-1 L-carnitine dehydratase/bile acid-inducible protein F YP_001561831.1 890864 D 398578 CDS YP_001561832.1 160896250 5746355 892076..893089 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: reh:H16_B2533 probable extra-cytoplasmic solute receptor; hypothetical protein 893089 5746355 Daci_0801 Delftia acidovorans SPH-1 hypothetical protein YP_001561832.1 892076 D 398578 CDS YP_001561833.1 160896251 5746356 893101..893889 1 NC_010002.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 893889 5746356 Daci_0802 Delftia acidovorans SPH-1 enoyl-CoA hydratase YP_001561833.1 893101 D 398578 CDS YP_001561834.1 160896252 5746357 complement(893892..894818) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bbr:BB1219 LysR-family transcriptional regulator; LysR family transcriptional regulator 894818 5746357 Daci_0803 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001561834.1 893892 R 398578 CDS YP_001561835.1 160896253 5746358 894920..896038 1 NC_010002.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 896038 mnmA 5746358 mnmA Delftia acidovorans SPH-1 tRNA-specific 2-thiouridylase MnmA YP_001561835.1 894920 D 398578 CDS YP_001561836.1 160896254 5746359 896170..897729 1 NC_010002.1 PFAM: beta-lactamase; KEGG: reh:H16_A2128 beta-lactamase class C; beta-lactamase 897729 5746359 Daci_0805 Delftia acidovorans SPH-1 beta-lactamase YP_001561836.1 896170 D 398578 CDS YP_001561837.1 160896255 5746360 complement(897698..900463) 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; KEGG: rme:Rmet_5166 putative signal transduction histidine kinase; histidine kinase 900463 5746360 Daci_0806 Delftia acidovorans SPH-1 histidine kinase YP_001561837.1 897698 R 398578 CDS YP_001561838.1 160896256 5746361 900576..901211 1 NC_010002.1 PFAM: regulatory protein TetR; KEGG: vei:Veis_3950 transcriptional regulator, TetR family; TetR family transcriptional regulator 901211 5746361 Daci_0807 Delftia acidovorans SPH-1 TetR family transcriptional regulator YP_001561838.1 900576 D 398578 CDS YP_001561839.1 160896257 5746362 complement(901227..902885) 1 NC_010002.1 TIGRFAM: phenylacetic acid degradation protein paaN; PFAM: Aldehyde Dehydrogenase_; KEGG: eba:ebA3541 PaaZ protein involved in aerobic phenylacetate metabolism; phenylacetic acid degradation protein paaN 902885 5746362 Daci_0808 Delftia acidovorans SPH-1 phenylacetic acid degradation protein paaN YP_001561839.1 901227 R 398578 CDS YP_001561840.1 160896258 5746363 903034..904353 1 NC_010002.1 KEGG: mpt:Mpe_A0986 phenylacetate--CoA ligase; TIGRFAM: phenylacetate-CoA ligase; PFAM: AMP-dependent synthetase and ligase; phenylacetate-CoA ligase 904353 5746363 Daci_0809 Delftia acidovorans SPH-1 phenylacetate-CoA ligase YP_001561840.1 903034 D 398578 CDS YP_001561841.1 160896259 5746364 904399..905421 1 NC_010002.1 with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; phenylacetate-CoA oxygenase subunit PaaA 905421 paaA 5746364 paaA Delftia acidovorans SPH-1 phenylacetate-CoA oxygenase subunit PaaA YP_001561841.1 904399 D 398578 CDS YP_001561842.1 160896260 5746365 905418..905723 1 NC_010002.1 with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation; phenylacetate-CoA oxygenase subunit PaaB 905723 paaB 5746365 paaB Delftia acidovorans SPH-1 phenylacetate-CoA oxygenase subunit PaaB YP_001561842.1 905418 D 398578 CDS YP_001561843.1 160896261 5746366 905737..906519 1 NC_010002.1 TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: vei:Veis_3947 phenylacetate-CoA oxygenase, PaaI subunit; phenylacetate-CoA oxygenase subunit PaaI 906519 5746366 Daci_0812 Delftia acidovorans SPH-1 phenylacetate-CoA oxygenase subunit PaaI YP_001561843.1 905737 D 398578 CDS YP_001561844.1 160896262 5746367 906519..907088 1 NC_010002.1 TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: protein of unknown function DUF59; KEGG: mpt:Mpe_A0990 putative ring oxidation complex protein 3; phenylacetate-CoA oxygenase subunit PaaJ 907088 5746367 Daci_0813 Delftia acidovorans SPH-1 phenylacetate-CoA oxygenase subunit PaaJ YP_001561844.1 906519 D 398578 CDS YP_001561845.1 160896263 5746368 907085..908182 1 NC_010002.1 TIGRFAM: phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mpt:Mpe_A0991 putative ring-hydroxylation complex protein 4; phenylacetate-CoA oxygenase/reductase subunit PaaK 908182 5746368 Daci_0814 Delftia acidovorans SPH-1 phenylacetate-CoA oxygenase/reductase subunit PaaK YP_001561845.1 907085 D 398578 CDS YP_001561846.1 160896264 5746369 complement(908213..909667) 1 NC_010002.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: aav:Aave_0427 sulphate transporter; sulfate transporter 909667 5746369 Daci_0815 Delftia acidovorans SPH-1 sulfate transporter YP_001561846.1 908213 R 398578 CDS YP_001561847.1 160896265 5746370 complement(910001..910498) 1 NC_010002.1 hypothetical protein 910498 5746370 Daci_0816 Delftia acidovorans SPH-1 hypothetical protein YP_001561847.1 910001 R 398578 CDS YP_001561848.1 160896266 5746371 complement(910585..911151) 1 NC_010002.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: aav:Aave_4713 single-strand binding protein; ssDNA-binding protein 911151 5746371 Daci_0817 Delftia acidovorans SPH-1 ssDNA-binding protein YP_001561848.1 910585 R 398578 CDS YP_001561849.1 160896267 5746372 complement(911312..912601) 1 NC_010002.1 PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_4065 major facilitator superfamily MFS_1; major facilitator transporter 912601 5746372 Daci_0818 Delftia acidovorans SPH-1 major facilitator transporter YP_001561849.1 911312 R 398578 CDS YP_001561850.1 160896268 5746373 912751..915864 1 NC_010002.1 TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: aav:Aave_4708 excinuclease ABC, A subunit; excinuclease ABC subunit A 915864 5746373 Daci_0819 Delftia acidovorans SPH-1 excinuclease ABC subunit A YP_001561850.1 912751 D 398578 CDS YP_001561851.1 160896269 5746374 915873..917027 1 NC_010002.1 PFAM: FAD dependent oxidoreductase; KEGG: aav:Aave_2431 FAD dependent oxidoreductase; FAD dependent oxidoreductase 917027 5746374 Daci_0820 Delftia acidovorans SPH-1 FAD dependent oxidoreductase YP_001561851.1 915873 D 398578 CDS YP_001561852.1 160896270 5746375 complement(917049..918026) 1 NC_010002.1 PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: ajs:Ajs_4061 hypothetical protein; succinylglutamate desuccinylase/aspartoacylase 918026 5746375 Daci_0821 Delftia acidovorans SPH-1 succinylglutamate desuccinylase/aspartoacylase YP_001561852.1 917049 R 398578 CDS YP_001561853.1 160896271 5746376 complement(918177..919304) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_4060 uncharacterized protein UPF0065; hypothetical protein 919304 5746376 Daci_0822 Delftia acidovorans SPH-1 hypothetical protein YP_001561853.1 918177 R 398578 CDS YP_001561854.1 160896272 5746377 complement(919316..920221) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_4698 transcriptional regulator, LysR family; LysR family transcriptional regulator 920221 5746377 Daci_0823 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001561854.1 919316 R 398578 CDS YP_001561855.1 160896273 5746378 complement(920242..921069) 1 NC_010002.1 type 2 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 921069 pyrF 5746378 pyrF Delftia acidovorans SPH-1 orotidine 5'-phosphate decarboxylase YP_001561855.1 920242 R 398578 CDS YP_001561856.1 160896274 5746379 921188..922039 1 NC_010002.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ajs:Ajs_4057 protein of unknown function DUF6, transmembrane; hypothetical protein 922039 5746379 Daci_0825 Delftia acidovorans SPH-1 hypothetical protein YP_001561856.1 921188 D 398578 CDS YP_001561857.1 160896275 5746380 complement(922114..922713) 1 NC_010002.1 KEGG: mfa:Mfla_2213 hypothetical protein; hypothetical protein 922713 5746380 Daci_0826 Delftia acidovorans SPH-1 hypothetical protein YP_001561857.1 922114 R 398578 CDS YP_001561858.1 160896276 5746381 complement(922710..923249) 1 NC_010002.1 KEGG: ajs:Ajs_2887 hypothetical protein; hypothetical protein 923249 5746381 Daci_0827 Delftia acidovorans SPH-1 hypothetical protein YP_001561858.1 922710 R 398578 CDS YP_001561859.1 160896277 5746382 complement(923370..924686) 1 NC_010002.1 PFAM: phosphoglycerate kinase; KEGG: ajs:Ajs_4056 phosphoglycerate kinase; phosphoglycerate kinase 924686 5746382 Daci_0828 Delftia acidovorans SPH-1 phosphoglycerate kinase YP_001561859.1 923370 R 398578 CDS YP_001561860.1 160896278 5746383 complement(924757..925092) 1 NC_010002.1 PFAM: branched-chain amino acid transport; KEGG: ajs:Ajs_4055 branched-chain amino acid transport; branched-chain amino acid transport 925092 5746383 Daci_0829 Delftia acidovorans SPH-1 branched-chain amino acid transport YP_001561860.1 924757 R 398578 CDS YP_001561861.1 160896279 5746384 complement(925092..925955) 1 NC_010002.1 PFAM: AzlC family protein; KEGG: ajs:Ajs_4054 AzlC family protein; AzlC family protein 925955 5746384 Daci_0830 Delftia acidovorans SPH-1 AzlC family protein YP_001561861.1 925092 R 398578 CDS YP_001561862.1 160896280 5746385 complement(925952..926935) 1 NC_010002.1 TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: ajs:Ajs_4053 methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase 926935 5746385 Daci_0831 Delftia acidovorans SPH-1 methionyl-tRNA formyltransferase YP_001561862.1 925952 R 398578 CDS YP_001561863.1 160896281 5746386 complement(926971..927510) 1 NC_010002.1 KEGG: ajs:Ajs_4052 putative lipoprotein transmembrane; putative lipoprotein transmembrane 927510 5746386 Daci_0832 Delftia acidovorans SPH-1 putative lipoprotein transmembrane YP_001561863.1 926971 R 398578 CDS YP_001561864.1 160896282 5746387 complement(927507..928019) 1 NC_010002.1 KEGG: ajs:Ajs_4051 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; peptide deformylase 928019 5746387 Daci_0833 Delftia acidovorans SPH-1 peptide deformylase YP_001561864.1 927507 R 398578 CDS YP_001561865.1 160896283 5746388 928219..929424 1 NC_010002.1 PFAM: Peptidoglycan-binding LysM; KEGG: aav:Aave_4687 peptidoglycan-binding LysM; peptidoglycan-binding LysM 929424 5746388 Daci_0834 Delftia acidovorans SPH-1 peptidoglycan-binding LysM YP_001561865.1 928219 D 398578 CDS YP_001561866.1 160896284 5746389 929450..930667 1 NC_010002.1 TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: ajs:Ajs_4049 transcriptional regulator, fis family; DNA protecting protein DprA 930667 5746389 Daci_0835 Delftia acidovorans SPH-1 DNA protecting protein DprA YP_001561866.1 929450 D 398578 CDS YP_001561867.1 160896285 5746390 complement(930811..933216) 1 NC_010002.1 KEGG: ajs:Ajs_4003 hypothetical protein; hypothetical protein 933216 5746390 Daci_0836 Delftia acidovorans SPH-1 hypothetical protein YP_001561867.1 930811 R 398578 CDS YP_001561868.1 160896286 5746391 complement(933256..934206) 1 NC_010002.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 934206 secF 5746391 secF Delftia acidovorans SPH-1 preprotein translocase subunit SecF YP_001561868.1 933256 R 398578 CDS YP_001561869.1 160896287 5746392 complement(934220..936142) 1 NC_010002.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 936142 secD 5746392 secD Delftia acidovorans SPH-1 preprotein translocase subunit SecD YP_001561869.1 934220 R 398578 CDS YP_001561870.1 160896288 5746393 complement(936234..936569) 1 NC_010002.1 TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: mpt:Mpe_A0276 preprotein translocase YajC subunit; preprotein translocase subunit YajC 936569 5746393 Daci_0839 Delftia acidovorans SPH-1 preprotein translocase subunit YajC YP_001561870.1 936234 R 398578 CDS YP_001561871.1 160896289 5746394 complement(936901..940482) 1 NC_010002.1 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; indolepyruvate ferredoxin oxidoreductase 940482 5746394 Daci_0840 Delftia acidovorans SPH-1 indolepyruvate ferredoxin oxidoreductase YP_001561871.1 936901 R 398578 CDS YP_001561872.1 160896290 5746395 940671..941174 1 NC_010002.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: ajs:Ajs_4009 putative transcriptional regulator, AsnC family; AsnC family transcriptional regulator 941174 5746395 Daci_0841 Delftia acidovorans SPH-1 AsnC family transcriptional regulator YP_001561872.1 940671 D 398578 CDS YP_001561873.1 160896291 5746396 941336..943096 1 NC_010002.1 PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: aav:Aave_4649 protein of unknown function DUF894, DitE; hypothetical protein 943096 5746396 Daci_0842 Delftia acidovorans SPH-1 hypothetical protein YP_001561873.1 941336 D 398578 CDS YP_001561874.1 160896292 5746397 complement(943344..944594) 1 NC_010002.1 PFAM: MltA domain protein; 3D domain protein; KEGG: ajs:Ajs_4013 MltA domain protein; MltA domain-containing protein 944594 5746397 Daci_0843 Delftia acidovorans SPH-1 MltA domain-containing protein YP_001561874.1 943344 R 398578 CDS YP_001561875.1 160896293 5746398 944844..945578 1 NC_010002.1 PFAM: OmpA/MotB domain protein; KEGG: aav:Aave_4652 OmpA/MotB domain protein; OmpA/MotB domain-containing protein 945578 5746398 Daci_0844 Delftia acidovorans SPH-1 OmpA/MotB domain-containing protein YP_001561875.1 944844 D 398578 CDS YP_001561876.1 160896294 5746399 945684..946958 1 NC_010002.1 KEGG: rso:RSp1185 probable D-serine deaminase (d-serine dehydratase) protein; putative D-serine deaminase (d-serine dehydratase) protein 946958 5746399 Daci_0845 Delftia acidovorans SPH-1 putative D-serine deaminase (d-serine dehydratase) protein YP_001561876.1 945684 D 398578 CDS YP_001561877.1 160896295 5746400 complement(946964..947593) 1 NC_010002.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: vei:Veis_4829 response regulator receiver protein; two component LuxR family transcriptional regulator 947593 5746400 Daci_0846 Delftia acidovorans SPH-1 two component LuxR family transcriptional regulator YP_001561877.1 946964 R 398578 CDS YP_001561878.1 160896296 5746401 complement(947610..949679) 1 NC_010002.1 KEGG: aav:Aave_4654 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase 949679 5746401 Daci_0847 Delftia acidovorans SPH-1 PAS/PAC sensor signal transduction histidine kinase YP_001561878.1 947610 R 398578 CDS YP_001561879.1 160896297 5746402 complement(949697..950512) 1 NC_010002.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: aav:Aave_4655 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 950512 5746402 Daci_0848 Delftia acidovorans SPH-1 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001561879.1 949697 R 398578 CDS YP_001561880.1 160896298 5746403 complement(950509..954663) 1 NC_010002.1 KEGG: aav:Aave_4656 hypothetical protein; hypothetical protein 954663 5746403 Daci_0849 Delftia acidovorans SPH-1 hypothetical protein YP_001561880.1 950509 R 398578 CDS YP_001561881.1 160896299 5746404 954767..957532 1 NC_010002.1 PFAM: glutamate-ammonia ligase adenylyltransferase; KEGG: ajs:Ajs_4019 (glutamate--ammonia-ligase) adenylyltransferase; (glutamate--ammonia-ligase) adenylyltransferase 957532 5746404 Daci_0850 Delftia acidovorans SPH-1 (glutamate--ammonia-ligase) adenylyltransferase YP_001561881.1 954767 D 398578 CDS YP_001561882.1 160896300 5746405 complement(957907..958527) 1 NC_010002.1 PFAM: Glutathione S-transferase domain; KEGG: ajs:Ajs_4025 glutathione S-transferase, N-terminal domain; glutathione S-transferase domain-containing protein 958527 5746405 Daci_0851 Delftia acidovorans SPH-1 glutathione S-transferase domain-containing protein YP_001561882.1 957907 R 398578 CDS YP_001561883.1 160896301 5746406 958577..960022 1 NC_010002.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 960022 5746406 Daci_0852 Delftia acidovorans SPH-1 adenylosuccinate lyase YP_001561883.1 958577 D 398578 CDS YP_001561884.1 160896302 5746407 960027..961103 1 NC_010002.1 PFAM: acyltransferase 3; KEGG: xom:XOO_0713 putative O-antigen acetylase; acyltransferase 3 961103 5746407 Daci_0853 Delftia acidovorans SPH-1 acyltransferase 3 YP_001561884.1 960027 D 398578 CDS YP_001561885.1 160896303 5746408 961131..961691 1 NC_010002.1 PFAM: YaeQ family protein; KEGG: ajs:Ajs_4027 YaeQ family protein; YaeQ family protein 961691 5746408 Daci_0854 Delftia acidovorans SPH-1 YaeQ family protein YP_001561885.1 961131 D 398578 CDS YP_001561886.1 160896304 5746409 complement(961718..962431) 1 NC_010002.1 KEGG: rme:Rmet_4803 hypothetical protein; hypothetical protein 962431 5746409 Daci_0855 Delftia acidovorans SPH-1 hypothetical protein YP_001561886.1 961718 R 398578 CDS YP_001561887.1 160896305 5746410 complement(962843..963274) 1 NC_010002.1 PFAM: protein of unknown function DUF1289; KEGG: vei:Veis_2838 protein of unknown function DUF1289; hypothetical protein 963274 5746410 Daci_0856 Delftia acidovorans SPH-1 hypothetical protein YP_001561887.1 962843 R 398578 CDS YP_001561888.1 160896306 5746411 963786..964526 1 NC_010002.1 PFAM: Integral membrane protein TerC; KEGG: ajs:Ajs_4030 integral membrane protein TerC; integral membrane protein TerC 964526 5746411 Daci_0857 Delftia acidovorans SPH-1 integral membrane protein TerC YP_001561888.1 963786 D 398578 CDS YP_001561889.1 160896307 5746412 964662..965120 1 NC_010002.1 KEGG: aav:Aave_4674 hypothetical protein; hypothetical protein 965120 5746412 Daci_0858 Delftia acidovorans SPH-1 hypothetical protein YP_001561889.1 964662 D 398578 CDS YP_001561890.1 160896308 5746413 965273..965620 1 NC_010002.1 PFAM: membrane protein of unknown function; KEGG: vei:Veis_0393 membrane protein of unknown function; hypothetical protein 965620 5746413 Daci_0859 Delftia acidovorans SPH-1 hypothetical protein YP_001561890.1 965273 D 398578 CDS YP_001561891.1 160896309 5746414 complement(965594..967219) 1 NC_010002.1 PFAM: peptidase M48 Ste24p; KEGG: ajs:Ajs_4033 peptidase M48, Ste24p; peptidase M48 Ste24p 967219 5746414 Daci_0860 Delftia acidovorans SPH-1 peptidase M48 Ste24p YP_001561891.1 965594 R 398578 CDS YP_001561892.1 160896310 5746415 967372..967842 1 NC_010002.1 TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: ajs:Ajs_4034 molybdenum cofactor biosynthesis protein C; molybdenum cofactor biosynthesis protein C 967842 5746415 Daci_0861 Delftia acidovorans SPH-1 molybdenum cofactor biosynthesis protein C YP_001561892.1 967372 D 398578 CDS YP_001561893.1 160896311 5746416 967920..968222 1 NC_010002.1 hypothetical protein 968222 5746416 Daci_0862 Delftia acidovorans SPH-1 hypothetical protein YP_001561893.1 967920 D 398578 CDS YP_001561894.1 160896312 5746417 968239..970182 1 NC_010002.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: gsu:GSU2601 TPR domain/SEC-C motif domain protein; hypothetical protein 970182 5746417 Daci_0863 Delftia acidovorans SPH-1 hypothetical protein YP_001561894.1 968239 D 398578 CDS YP_001561895.1 160896313 5746418 complement(970388..970879) 1 NC_010002.1 KEGG: mpt:Mpe_A0065 pilin; pilin 970879 5746418 Daci_0864 Delftia acidovorans SPH-1 pilin YP_001561895.1 970388 R 398578 CDS YP_001561896.1 160896314 5746419 complement(971104..971817) 1 NC_010002.1 PFAM: Forkhead-associated protein; KEGG: aav:Aave_4680 FHA domain containing protein; FHA domain-containing protein 971817 5746419 Daci_0865 Delftia acidovorans SPH-1 FHA domain-containing protein YP_001561896.1 971104 R 398578 CDS YP_001561897.1 160896315 5746420 complement(972061..972942) 1 NC_010002.1 PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: mpt:Mpe_A0068 serine/threonine specific protein phosphatase (putative); protein serine/threonine phosphatase 972942 5746420 Daci_0866 Delftia acidovorans SPH-1 protein serine/threonine phosphatase YP_001561897.1 972061 R 398578 CDS YP_001561898.1 160896316 5746421 complement(973139..973831) 1 NC_010002.1 PFAM: Integral membrane protein TerC; KEGG: ajs:Ajs_4045 integral membrane protein TerC; integral membrane protein TerC 973831 5746421 Daci_0867 Delftia acidovorans SPH-1 integral membrane protein TerC YP_001561898.1 973139 R 398578 CDS YP_001561899.1 160896317 5746422 complement(973998..974891) 1 NC_010002.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha 974891 5746422 Daci_0868 Delftia acidovorans SPH-1 succinyl-CoA synthetase subunit alpha YP_001561899.1 973998 R 398578 CDS YP_001561900.1 160896318 5746423 complement(974912..976072) 1 NC_010002.1 catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 976072 sucC 5746423 sucC Delftia acidovorans SPH-1 succinyl-CoA synthetase subunit beta YP_001561900.1 974912 R 398578 CDS YP_001561901.1 160896319 5746424 976509..977441 1 NC_010002.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis; N-acetyl-gamma-glutamyl-phosphate reductase 977441 5746424 Daci_0870 Delftia acidovorans SPH-1 N-acetyl-gamma-glutamyl-phosphate reductase YP_001561901.1 976509 D 398578 CDS YP_001561902.1 160896320 5746425 977438..979324 1 NC_010002.1 KEGG: vei:Veis_0689 hypothetical protein; hypothetical protein 979324 5746425 Daci_0871 Delftia acidovorans SPH-1 hypothetical protein YP_001561902.1 977438 D 398578 CDS YP_001561903.1 160896321 5746426 979347..980267 1 NC_010002.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: esa:ESA_02149 hypothetical protein; hypothetical protein 980267 5746426 Daci_0872 Delftia acidovorans SPH-1 hypothetical protein YP_001561903.1 979347 D 398578 CDS YP_001561904.1 160896322 5746427 complement(980264..980740) 1 NC_010002.1 KEGG: aav:Aave_4641 regulatory protein RecX; regulatory protein RecX 980740 5746427 Daci_0873 Delftia acidovorans SPH-1 regulatory protein RecX YP_001561904.1 980264 R 398578 CDS YP_001561905.1 160896323 5746428 complement(980943..982046) 1 NC_010002.1 KEGG: ajs:Ajs_4001 RecA protein; TIGRFAM: recA protein; PFAM: RecA domain protein; SMART: AAA ATPase; recA protein 982046 5746428 Daci_0874 Delftia acidovorans SPH-1 recA protein YP_001561905.1 980943 R 398578 CDS YP_001561906.1 160896324 5746429 982194..982694 1 NC_010002.1 PFAM: regulatory protein MarR; KEGG: ajs:Ajs_4000 transcriptional regulator, MarR family; MarR family transcriptional regulator 982694 5746429 Daci_0875 Delftia acidovorans SPH-1 MarR family transcriptional regulator YP_001561906.1 982194 D 398578 CDS YP_001561907.1 160896325 5746430 982794..983468 1 NC_010002.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ajs:Ajs_3999 two component transcriptional regulator, winged helix family; two component transcriptional regulator 983468 5746430 Daci_0876 Delftia acidovorans SPH-1 two component transcriptional regulator YP_001561907.1 982794 D 398578 CDS YP_001561908.1 160896326 5746431 983563..985065 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; KEGG: aav:Aave_4637 integral membrane sensor signal transduction histidine kinase; histidine kinase 985065 5746431 Daci_0877 Delftia acidovorans SPH-1 histidine kinase YP_001561908.1 983563 D 398578 CDS YP_001561909.1 160896327 5746432 complement(985022..986032) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_3997 transcriptional regulator, LysR family; LysR family transcriptional regulator 986032 5746432 Daci_0878 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001561909.1 985022 R 398578 CDS YP_001561910.1 160896328 5746433 986142..987110 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_3996 uncharacterized protein UPF0065; hypothetical protein 987110 5746433 Daci_0879 Delftia acidovorans SPH-1 hypothetical protein YP_001561910.1 986142 D 398578 CDS YP_001561911.1 160896329 5746434 987278..988210 1 NC_010002.1 PFAM: N-formylglutamate amidohydrolase; KEGG: ajs:Ajs_3995 N-formylglutamate amidohydrolase; N-formylglutamate amidohydrolase 988210 5746434 Daci_0880 Delftia acidovorans SPH-1 N-formylglutamate amidohydrolase YP_001561911.1 987278 D 398578 CDS YP_001561912.1 160896330 5746435 complement(988286..989041) 1 NC_010002.1 PFAM: Sporulation domain protein; KEGG: aav:Aave_4630 sporulation domain protein; sporulation domain-containing protein 989041 5746435 Daci_0881 Delftia acidovorans SPH-1 sporulation domain-containing protein YP_001561912.1 988286 R 398578 CDS YP_001561913.1 160896331 5746436 complement(989076..989906) 1 NC_010002.1 TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; KEGG: aav:Aave_4629 biotin--acetyl-CoA-carboxylase ligase; biotin--acetyl-CoA-carboxylase ligase 989906 5746436 Daci_0882 Delftia acidovorans SPH-1 biotin--acetyl-CoA-carboxylase ligase YP_001561913.1 989076 R 398578 CDS YP_001561914.1 160896332 5746437 complement(989903..990661) 1 NC_010002.1 PFAM: nuclear protein SET; KEGG: ajs:Ajs_3991 nuclear protein SET; nuclear protein SET 990661 5746437 Daci_0883 Delftia acidovorans SPH-1 nuclear protein SET YP_001561914.1 989903 R 398578 CDS YP_001561915.1 160896333 5746438 990694..993621 1 NC_010002.1 decatenates replicating daughter chromosomes; DNA topoisomerase III 993621 5746438 Daci_0884 Delftia acidovorans SPH-1 DNA topoisomerase III YP_001561915.1 990694 D 398578 CDS YP_001561916.1 160896334 5746439 993777..994604 1 NC_010002.1 KEGG: aav:Aave_4511 protein tyrosine/serine phosphatase; protein tyrosine/serine phosphatase 994604 5746439 Daci_0885 Delftia acidovorans SPH-1 protein tyrosine/serine phosphatase YP_001561916.1 993777 D 398578 CDS YP_001561917.1 160896335 5746440 995110..996297 1 NC_010002.1 PFAM: Integrase catalytic region; KEGG: ppf:Pput_3520 integrase, catalytic region; integrase catalytic subunit 996297 5746440 Daci_0886 Delftia acidovorans SPH-1 integrase catalytic subunit YP_001561917.1 995110 D 398578 CDS YP_001561918.1 160896336 5746441 complement(996639..999164) 1 NC_010002.1 PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: rme:Rmet_4835 glycosyl transferase, family 51; peptidoglycan glycosyltransferase 999164 5746441 Daci_0887 Delftia acidovorans SPH-1 peptidoglycan glycosyltransferase YP_001561918.1 996639 R 398578 CDS YP_001561919.1 160896337 5746442 complement(999329..999913) 1 NC_010002.1 PFAM: Rubrerythrin; Ferritin Dps family protein; KEGG: aav:Aave_3866 ferritin, Dps family protein; ferritin Dps family protein 999913 5746442 Daci_0888 Delftia acidovorans SPH-1 ferritin Dps family protein YP_001561919.1 999329 R 398578 CDS YP_001561920.1 160896338 5746443 1000140..1000646 1 NC_010002.1 PFAM: glutathione peroxidase; KEGG: ajs:Ajs_0173 glutathione peroxidase; glutathione peroxidase 1000646 5746443 Daci_0889 Delftia acidovorans SPH-1 glutathione peroxidase YP_001561920.1 1000140 D 398578 CDS YP_001561921.1 160896339 5746444 1000776..1001840 1 NC_010002.1 PFAM: Asparaginase/glutaminase; KEGG: har:HEAR1103 putative L-asparaginase; putative signal peptide protein; asparaginase 1001840 5746444 Daci_0890 Delftia acidovorans SPH-1 asparaginase YP_001561921.1 1000776 D 398578 CDS YP_001561922.1 160896340 5746445 1001954..1002412 1 NC_010002.1 PFAM: RDD domain containing protein; KEGG: aav:Aave_4623 RDD domain containing protein; RDD domain-containing protein 1002412 5746445 Daci_0891 Delftia acidovorans SPH-1 RDD domain-containing protein YP_001561922.1 1001954 D 398578 CDS YP_001561923.1 160896341 5746446 complement(1002450..1002893) 1 NC_010002.1 KEGG: aav:Aave_0036 hypothetical protein; hypothetical protein 1002893 5746446 Daci_0892 Delftia acidovorans SPH-1 hypothetical protein YP_001561923.1 1002450 R 398578 CDS YP_001561924.1 160896342 5746447 complement(1003087..1003695) 1 NC_010002.1 hypothetical protein 1003695 5746447 Daci_0893 Delftia acidovorans SPH-1 hypothetical protein YP_001561924.1 1003087 R 398578 CDS YP_001561925.1 160896343 5746448 complement(1003951..1007448) 1 NC_010002.1 PFAM: SMC domain protein; KEGG: dar:Daro_1919 SMC protein, N-terminal; SMC domain-containing protein 1007448 5746448 Daci_0894 Delftia acidovorans SPH-1 SMC domain-containing protein YP_001561925.1 1003951 R 398578 CDS YP_001561926.1 160896344 5746449 complement(1007445..1008722) 1 NC_010002.1 with SbcC cleaves DNA hairpin structure, also has 5' single-strand endonuclease activity; exonuclease subunit SbcD 1008722 5746449 Daci_0895 Delftia acidovorans SPH-1 exonuclease subunit SbcD YP_001561926.1 1007445 R 398578 CDS YP_001561927.1 160896345 5746450 1008862..1009248 1 NC_010002.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ajs:Ajs_3978 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 1009248 5746450 Daci_0896 Delftia acidovorans SPH-1 glyoxalase/bleomycin resistance protein/dioxygenase YP_001561927.1 1008862 D 398578 CDS YP_001561928.1 160896346 5746451 complement(1009388..1009828) 1 NC_010002.1 hypothetical protein 1009828 5746451 Daci_0897 Delftia acidovorans SPH-1 hypothetical protein YP_001561928.1 1009388 R 398578 CDS YP_001561929.1 160896347 5746452 complement(1010132..1010428) 1 NC_010002.1 KEGG: aav:Aave_4248 N-acetylmuramoyl-L-alanine amidase, family 2; hypothetical protein 1010428 5746452 Daci_0898 Delftia acidovorans SPH-1 hypothetical protein YP_001561929.1 1010132 R 398578 CDS YP_001561930.1 160896348 5746453 1010795..1011442 1 NC_010002.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: ajs:Ajs_2324 methyltransferase type 11; type 12 methyltransferase 1011442 5746453 Daci_0899 Delftia acidovorans SPH-1 type 12 methyltransferase YP_001561930.1 1010795 D 398578 CDS YP_001561931.1 160896349 5746454 1011451..1012296 1 NC_010002.1 PFAM: DTW domain containing protein; KEGG: pol:Bpro_4750 hypothetical protein; DTW domain-containing protein 1012296 5746454 Daci_0900 Delftia acidovorans SPH-1 DTW domain-containing protein YP_001561931.1 1011451 D 398578 CDS YP_001561932.1 160896350 5746455 1012807..1013955 1 NC_010002.1 PFAM: acyltransferase 3; KEGG: ajs:Ajs_2326 acyltransferase 3; acyltransferase 3 1013955 5746455 Daci_0901 Delftia acidovorans SPH-1 acyltransferase 3 YP_001561932.1 1012807 D 398578 CDS YP_001561933.1 160896351 5746456 complement(1014037..1014684) 1 NC_010002.1 PFAM: protein of unknown function DUF924; KEGG: tbd:Tbd_0861 hypothetical protein; hypothetical protein 1014684 5746456 Daci_0902 Delftia acidovorans SPH-1 hypothetical protein YP_001561933.1 1014037 R 398578 CDS YP_001561934.1 160896352 5746457 complement(1014884..1016272) 1 NC_010002.1 PFAM: HipA domain protein; KEGG: mxa:MXAN_0015 hypothetical protein; hypothetical protein 1016272 5746457 Daci_0903 Delftia acidovorans SPH-1 hypothetical protein YP_001561934.1 1014884 R 398578 CDS YP_001561935.1 160896353 5746458 complement(1016553..1017635) 1 NC_010002.1 PFAM: porin Gram-negative type; KEGG: pol:Bpro_4315 putative transmembrane outer membrane porin signal peptide protein; porin 1017635 5746458 Daci_0904 Delftia acidovorans SPH-1 porin YP_001561935.1 1016553 R 398578 CDS YP_001561936.1 160896354 5746459 1017855..1018478 1 NC_010002.1 KEGG: ajs:Ajs_3969 hypothetical protein; hypothetical protein 1018478 5746459 Daci_0905 Delftia acidovorans SPH-1 hypothetical protein YP_001561936.1 1017855 D 398578 CDS YP_001561937.1 160896355 5746460 complement(1018518..1019504) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: rme:Rmet_4203 uncharacterized protein UPF0065; hypothetical protein 1019504 5746460 Daci_0906 Delftia acidovorans SPH-1 hypothetical protein YP_001561937.1 1018518 R 398578 CDS YP_001561938.1 160896356 5746461 1019647..1020369 1 NC_010002.1 PFAM: Glutathione S-transferase domain; KEGG: cvi:CV_2745 probable glutathione S-transferase family protein; glutathione S-transferase domain-containing protein 1020369 5746461 Daci_0907 Delftia acidovorans SPH-1 glutathione S-transferase domain-containing protein YP_001561938.1 1019647 D 398578 CDS YP_001561939.1 160896357 5746462 1020502..1021548 1 NC_010002.1 PFAM: Pirin domain protein; KEGG: ajs:Ajs_3965 pirin domain protein domain protein; pirin domain-containing protein 1021548 5746462 Daci_0908 Delftia acidovorans SPH-1 pirin domain-containing protein YP_001561939.1 1020502 D 398578 CDS YP_001561940.1 160896358 5746463 complement(1021575..1022027) 1 NC_010002.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: mpt:Mpe_A3531 hydrolase or acyltransferase-like protein; carboxymuconolactone decarboxylase 1022027 5746463 Daci_0909 Delftia acidovorans SPH-1 carboxymuconolactone decarboxylase YP_001561940.1 1021575 R 398578 CDS YP_001561941.1 160896359 5746464 complement(1022044..1023420) 1 NC_010002.1 PFAM: fumarate lyase; KEGG: pol:Bpro_1855 3-carboxy-cis,cis-muconate cycloisomerase; fumarate lyase 1023420 5746464 Daci_0910 Delftia acidovorans SPH-1 fumarate lyase YP_001561941.1 1022044 R 398578 CDS YP_001561942.1 160896360 5746465 complement(1023437..1024453) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: pol:Bpro_1233 uncharacterized protein UPF0065; hypothetical protein 1024453 5746465 Daci_0911 Delftia acidovorans SPH-1 hypothetical protein YP_001561942.1 1023437 R 398578 CDS YP_001561943.1 160896361 5746466 1024545..1025456 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: vei:Veis_3047 transcriptional regulator, LysR family; LysR family transcriptional regulator 1025456 5746466 Daci_0912 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001561943.1 1024545 D 398578 CDS YP_001561944.1 160896362 5746467 1025514..1026038 1 NC_010002.1 KEGG: ajs:Ajs_3964 peptidylprolyl isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase 1026038 5746467 Daci_0913 Delftia acidovorans SPH-1 FKBP-type peptidylprolyl isomerase YP_001561944.1 1025514 D 398578 CDS YP_001561945.1 160896363 5746468 complement(1026126..1026971) 1 NC_010002.1 extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols; part of the bacterial aromatic compound degradation pathway; protocatechuate 4,5-dioxygenase subunit beta 1026971 5746468 Daci_0914 Delftia acidovorans SPH-1 protocatechuate 4,5-dioxygenase subunit beta YP_001561945.1 1026126 R 398578 CDS YP_001561946.1 160896364 5746469 complement(1027019..1027360) 1 NC_010002.1 extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols; part of the bacterial aromatic compound degradation pathway; protocatechuate 4,5-dioxygenase subunit alpha 1027360 5746469 Daci_0915 Delftia acidovorans SPH-1 protocatechuate 4,5-dioxygenase subunit alpha YP_001561946.1 1027019 R 398578 CDS YP_001561947.1 160896365 5746470 1027437..1028456 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pna:Pnap_2735 transcriptional regulator, LysR family; LysR family transcriptional regulator 1028456 5746470 Daci_0916 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001561947.1 1027437 D 398578 CDS YP_001561948.1 160896366 5746471 complement(1028358..1029239) 1 NC_010002.1 PFAM: glutamine amidotransferase class-I; peptidase C26; KEGG: ajs:Ajs_3963 peptidase C26; peptidase C26 1029239 5746471 Daci_0917 Delftia acidovorans SPH-1 peptidase C26 YP_001561948.1 1028358 R 398578 CDS YP_001561949.1 160896367 5746472 1029612..1029992 1 NC_010002.1 KEGG: aav:Aave_4596 ribosomal subunit interface protein, putative; ribosomal subunit interface protein 1029992 5746472 Daci_0918 Delftia acidovorans SPH-1 ribosomal subunit interface protein YP_001561949.1 1029612 D 398578 CDS YP_001561950.1 160896368 5746473 complement(1030093..1031109) 1 NC_010002.1 PFAM: Pirin domain protein; KEGG: csa:Csal_1778 pirin-like protein; pirin domain-containing protein 1031109 5746473 Daci_0919 Delftia acidovorans SPH-1 pirin domain-containing protein YP_001561950.1 1030093 R 398578 CDS YP_001561951.1 160896369 5746474 1031238..1031534 1 NC_010002.1 hypothetical protein 1031534 5746474 Daci_0920 Delftia acidovorans SPH-1 hypothetical protein YP_001561951.1 1031238 D 398578 CDS YP_001561952.1 160896370 5746475 complement(1031616..1032026) 1 NC_010002.1 PFAM: OsmC family protein; KEGG: acb:A1S_1522 predicted redox disulfide bond formation protein OsmC-like protein; OsmC family protein 1032026 5746475 Daci_0921 Delftia acidovorans SPH-1 OsmC family protein YP_001561952.1 1031616 R 398578 CDS YP_001561953.1 160896371 5746476 complement(1032083..1032979) 1 NC_010002.1 PFAM: beta-lactamase domain protein; KEGG: rpa:RPA0365 beta-lactamase-like; beta-lactamase domain-containing protein 1032979 5746476 Daci_0922 Delftia acidovorans SPH-1 beta-lactamase domain-containing protein YP_001561953.1 1032083 R 398578 CDS YP_001561954.1 160896372 5746477 1033065..1033382 1 NC_010002.1 PFAM: regulatory protein ArsR; transcriptional regulator TrmB; KEGG: rme:Rmet_2370 transcriptional regulator, ArsR family; transcriptional regulator TrmB 1033382 5746477 Daci_0923 Delftia acidovorans SPH-1 transcriptional regulator TrmB YP_001561954.1 1033065 D 398578 CDS YP_001561955.1 160896373 5746478 1033410..1033940 1 NC_010002.1 PFAM: Rhodanese domain protein; KEGG: rme:Rmet_2371 rhodanese-like protein; rhodanese domain-containing protein 1033940 5746478 Daci_0924 Delftia acidovorans SPH-1 rhodanese domain-containing protein YP_001561955.1 1033410 D 398578 CDS YP_001561956.1 160896374 5746479 1034040..1035422 1 NC_010002.1 PFAM: peptidase M24; peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein; KEGG: ajs:Ajs_3957 peptidase M24; peptidase M24 1035422 5746479 Daci_0925 Delftia acidovorans SPH-1 peptidase M24 YP_001561956.1 1034040 D 398578 CDS YP_001561957.1 160896375 5746480 1035415..1036233 1 NC_010002.1 KEGG: csa:Csal_2373 abortive infection protein; abortive infection protein 1036233 5746480 Daci_0926 Delftia acidovorans SPH-1 abortive infection protein YP_001561957.1 1035415 D 398578 CDS YP_001561958.1 160896376 5746481 complement(1036236..1037501) 1 NC_010002.1 KEGG: rha:RHA1_ro07024 hypothetical protein; hypothetical protein 1037501 5746481 Daci_0927 Delftia acidovorans SPH-1 hypothetical protein YP_001561958.1 1036236 R 398578 CDS YP_001561959.1 160896377 5746482 complement(1037693..1039354) 1 NC_010002.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rme:Rmet_4454 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 1039354 5746482 Daci_0928 Delftia acidovorans SPH-1 AMP-dependent synthetase/ligase YP_001561959.1 1037693 R 398578 CDS YP_001561960.1 160896378 5746483 complement(1039351..1040334) 1 NC_010002.1 KEGG: rme:Rmet_4455 hypothetical protein; hypothetical protein 1040334 5746483 Daci_0929 Delftia acidovorans SPH-1 hypothetical protein YP_001561960.1 1039351 R 398578 CDS YP_001561961.1 160896379 5746484 1040708..1042144 1 NC_010002.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 1042144 5746484 Daci_0930 Delftia acidovorans SPH-1 pyruvate kinase YP_001561961.1 1040708 D 398578 CDS YP_001561962.1 160896380 5746485 complement(1042220..1042789) 1 NC_010002.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: aav:Aave_4580 phosphoesterase, PA-phosphatase related protein; phosphoesterase PA-phosphatase-like protein 1042789 5746485 Daci_0931 Delftia acidovorans SPH-1 phosphoesterase PA-phosphatase-like protein YP_001561962.1 1042220 R 398578 CDS YP_001561963.1 160896381 5746486 complement(1042802..1043578) 1 NC_010002.1 KEGG: vei:Veis_0197 PAP2 (acid phosphatase) superfamily protein-like protein; PAP2 (acid phosphatase) superfamily protein-like protein 1043578 5746486 Daci_0932 Delftia acidovorans SPH-1 PAP2 (acid phosphatase) superfamily protein-like protein YP_001561963.1 1042802 R 398578 CDS YP_001561964.1 160896382 5746487 1043609..1044370 1 NC_010002.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: aav:Aave_4578 two component transcriptional regulator, winged helix family; two component transcriptional regulator 1044370 5746487 Daci_0933 Delftia acidovorans SPH-1 two component transcriptional regulator YP_001561964.1 1043609 D 398578 CDS YP_001561965.1 160896383 5746488 1044367..1045737 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: aav:Aave_4577 histidine kinase; histidine kinase 1045737 5746488 Daci_0934 Delftia acidovorans SPH-1 histidine kinase YP_001561965.1 1044367 D 398578 CDS YP_001561966.1 160896384 5746489 1045819..1046931 1 NC_010002.1 KEGG: aav:Aave_4576 fructose-bisphosphate aldolase, class II, Calvin cycle subtype; TIGRFAM: ketose-bisphosphate aldolase; fructose-bisphosphate aldolase, class II, Calvin cycle subtype; PFAM: ketose-bisphosphate aldolase class-II; fructose-bisphosphate aldolase 1046931 5746489 Daci_0935 Delftia acidovorans SPH-1 fructose-bisphosphate aldolase YP_001561966.1 1045819 D 398578 CDS YP_001561967.1 160896385 5746490 complement(1046988..1047824) 1 NC_010002.1 KEGG: bbr:BB1856 putative integral membrane protein; putative integral membrane protein 1047824 5746490 Daci_0936 Delftia acidovorans SPH-1 putative integral membrane protein YP_001561967.1 1046988 R 398578 CDS YP_001561968.1 160896386 5746491 complement(1047957..1048775) 1 NC_010002.1 PFAM: Nucleotidyl transferase; KEGG: aav:Aave_4583 nucleotidyl transferase; nucleotidyl transferase 1048775 5746491 Daci_0937 Delftia acidovorans SPH-1 nucleotidyl transferase YP_001561968.1 1047957 R 398578 CDS YP_001561969.1 160896387 5746492 1048860..1050905 1 NC_010002.1 TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: ajs:Ajs_3959 transketolase; transketolase 1050905 5746492 Daci_0938 Delftia acidovorans SPH-1 transketolase YP_001561969.1 1048860 D 398578 CDS YP_001561970.1 160896388 5746493 1051015..1052016 1 NC_010002.1 TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; KEGG: ajs:Ajs_3960 glyceraldehyde-3-phosphate dehydrogenase, type I; glyceraldehyde-3-phosphate dehydrogenase 1052016 5746493 Daci_0939 Delftia acidovorans SPH-1 glyceraldehyde-3-phosphate dehydrogenase YP_001561970.1 1051015 D 398578 CDS YP_001561971.1 160896389 5746494 1052141..1052677 1 NC_010002.1 KEGG: xac:XAC3665 hypothetical protein; hypothetical protein 1052677 5746494 Daci_0940 Delftia acidovorans SPH-1 hypothetical protein YP_001561971.1 1052141 D 398578 CDS YP_001561972.1 160896390 5746495 1052732..1053118 1 NC_010002.1 TIGRFAM: export-related chaperone CsaA; PFAM: t-RNA-binding domain protein; KEGG: mfa:Mfla_1103 secretion chaperone CsaA; export-like chaperone CsaA 1053118 5746495 Daci_0941 Delftia acidovorans SPH-1 export-like chaperone CsaA YP_001561972.1 1052732 D 398578 CDS YP_001561973.1 160896391 5746496 complement(1053119..1054093) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: pol:Bpro_3412 uncharacterized protein UPF0065; hypothetical protein 1054093 5746496 Daci_0942 Delftia acidovorans SPH-1 hypothetical protein YP_001561973.1 1053119 R 398578 CDS YP_001561974.1 160896392 5746497 complement(1054090..1055343) 1 NC_010002.1 KEGG: rme:Rmet_3159 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 1055343 5746497 Daci_0943 Delftia acidovorans SPH-1 amidohydrolase YP_001561974.1 1054090 R 398578 CDS YP_001561975.1 160896393 5746498 complement(1055486..1056379) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pna:Pnap_4004 transcriptional regulator, LysR family; LysR family transcriptional regulator 1056379 5746498 Daci_0944 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001561975.1 1055486 R 398578 CDS YP_001561976.1 160896394 5746499 1056520..1057341 1 NC_010002.1 PFAM: aldo/keto reductase; KEGG: esa:ESA_03132 hypothetical protein; aldo/keto reductase 1057341 5746499 Daci_0945 Delftia acidovorans SPH-1 aldo/keto reductase YP_001561976.1 1056520 D 398578 CDS YP_001561977.1 160896395 5746500 1057498..1059177 1 NC_010002.1 PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_3950 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 1059177 5746500 Daci_0946 Delftia acidovorans SPH-1 AMP-dependent synthetase/ligase YP_001561977.1 1057498 D 398578 CDS YP_001561978.1 160896396 5746501 complement(1059246..1059392) 1 NC_010002.1 hypothetical protein 1059392 5746501 Daci_0947 Delftia acidovorans SPH-1 hypothetical protein YP_001561978.1 1059246 R 398578 CDS YP_001561979.1 160896397 5746502 1059413..1059778 1 NC_010002.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: mlo:mll7935 transcriptional regulator; AsnC family transcriptional regulator 1059778 5746502 Daci_0948 Delftia acidovorans SPH-1 AsnC family transcriptional regulator YP_001561979.1 1059413 D 398578 CDS YP_001561980.1 160896398 5746503 1059964..1060494 1 NC_010002.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: pol:Bpro_3691 cupin 2, conserved barrel; cupin 1060494 5746503 Daci_0949 Delftia acidovorans SPH-1 cupin YP_001561980.1 1059964 D 398578 CDS YP_001561981.1 160896399 5746504 1060509..1061363 1 NC_010002.1 PFAM: alpha/beta hydrolase fold; KEGG: pol:Bpro_3690 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 1061363 5746504 Daci_0950 Delftia acidovorans SPH-1 alpha/beta hydrolase fold protein YP_001561981.1 1060509 D 398578 CDS YP_001561982.1 160896400 5746505 1061386..1062192 1 NC_010002.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: pol:Bpro_3689 transcriptional regulator, IclR family; IclR family transcriptional regulator 1062192 5746505 Daci_0951 Delftia acidovorans SPH-1 IclR family transcriptional regulator YP_001561982.1 1061386 D 398578 CDS YP_001561983.1 160896401 5746506 1062241..1063044 1 NC_010002.1 catalyzes the formation of L-aspartate to iminoaspartate in NAD(+) biosynthesis; L-aspartate dehydrogenase 1063044 5746506 Daci_0952 Delftia acidovorans SPH-1 L-aspartate dehydrogenase YP_001561983.1 1062241 D 398578 CDS YP_001561984.1 160896402 5746507 1063156..1063911 1 NC_010002.1 enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1063911 5746507 Daci_0953 Delftia acidovorans SPH-1 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase YP_001561984.1 1063156 D 398578 CDS YP_001561985.1 160896403 5746508 1064136..1065323 1 NC_010002.1 PFAM: Integrase catalytic region; KEGG: ppf:Pput_3520 integrase, catalytic region; integrase catalytic subunit 1065323 5746508 Daci_0954 Delftia acidovorans SPH-1 integrase catalytic subunit YP_001561985.1 1064136 D 398578 CDS YP_001561986.1 160896404 5746509 complement(1065602..1065877) 1 NC_010002.1 KEGG: rso:RSc1866 hypothetical protein; hypothetical protein 1065877 5746509 Daci_0955 Delftia acidovorans SPH-1 hypothetical protein YP_001561986.1 1065602 R 398578 CDS YP_001561987.1 160896405 5746510 1066710..1067480 1 NC_010002.1 member of a large family of NAD or NADP-dependent oxidoreductases; paralogs occur in many bacteria; short chain dehydrogenase 1067480 5746510 Daci_0956 Delftia acidovorans SPH-1 short chain dehydrogenase YP_001561987.1 1066710 D 398578 CDS YP_001561988.1 160896406 5746511 1067493..1068380 1 NC_010002.1 PFAM: regulatory protein MarR; regulatory protein IclR; Transcriptional regulator IclR; KEGG: pol:Bpro_3689 transcriptional regulator, IclR family; IclR family transcriptional regulator 1068380 5746511 Daci_0957 Delftia acidovorans SPH-1 IclR family transcriptional regulator YP_001561988.1 1067493 D 398578 CDS YP_001561989.1 160896407 5746512 1068373..1069170 1 NC_010002.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pol:Bpro_3688 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase 1069170 5746512 Daci_0958 Delftia acidovorans SPH-1 short chain dehydrogenase YP_001561989.1 1068373 D 398578 CDS YP_001561990.1 160896408 5746513 1069205..1070911 1 NC_010002.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: reu:Reut_B3575 hypothetical protein; hypothetical protein 1070911 5746513 Daci_0959 Delftia acidovorans SPH-1 hypothetical protein YP_001561990.1 1069205 D 398578 CDS YP_001561991.1 160896409 5746514 1070947..1072422 1 NC_010002.1 PFAM: Aldehyde Dehydrogenase_; KEGG: pol:Bpro_3685 betaine-aldehyde dehydrogenase; aldehyde dehydrogenase 1072422 5746514 Daci_0960 Delftia acidovorans SPH-1 aldehyde dehydrogenase YP_001561991.1 1070947 D 398578 CDS YP_001561992.1 160896410 5746515 1072435..1073409 1 NC_010002.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pol:Bpro_3684 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 1073409 5746515 Daci_0961 Delftia acidovorans SPH-1 glyoxalase/bleomycin resistance protein/dioxygenase YP_001561992.1 1072435 D 398578 CDS YP_001561993.1 160896411 5746516 1073460..1074437 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: pol:Bpro_3683 twin-arginine translocation pathway signal; hypothetical protein 1074437 5746516 Daci_0962 Delftia acidovorans SPH-1 hypothetical protein YP_001561993.1 1073460 D 398578 CDS YP_001561994.1 160896412 5746517 1074622..1074843 1 NC_010002.1 KEGG: pol:Bpro_3682 hypothetical protein; hypothetical protein 1074843 5746517 Daci_0963 Delftia acidovorans SPH-1 hypothetical protein YP_001561994.1 1074622 D 398578 CDS YP_001561995.1 160896413 5746518 1074868..1075893 1 NC_010002.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: pol:Bpro_3681 Rieske (2Fe-2S) region; Rieske (2Fe-2S) domain-containing protein 1075893 5746518 Daci_0964 Delftia acidovorans SPH-1 Rieske (2Fe-2S) domain-containing protein YP_001561995.1 1074868 D 398578 CDS YP_001561996.1 160896414 5746519 1075890..1076849 1 NC_010002.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: pol:Bpro_3680 ferredoxin; ferredoxin 1076849 5746519 Daci_0965 Delftia acidovorans SPH-1 ferredoxin YP_001561996.1 1075890 D 398578 CDS YP_001561997.1 160896415 5746520 1076929..1077996 1 NC_010002.1 PFAM: porin Gram-negative type; KEGG: pol:Bpro_3679 porin, gram-negative type; porin 1077996 5746520 Daci_0966 Delftia acidovorans SPH-1 porin YP_001561997.1 1076929 D 398578 CDS YP_001561998.1 160896416 5746521 1078026..1079321 1 NC_010002.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: spe:Spro_3970 major facilitator superfamily MFS_1; major facilitator transporter 1079321 5746521 Daci_0967 Delftia acidovorans SPH-1 major facilitator transporter YP_001561998.1 1078026 D 398578 CDS YP_001561999.1 160896417 5746522 complement(1079329..1080237) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bbr:BB0448 probable transcriptional regulator; LysR family transcriptional regulator 1080237 5746522 Daci_0968 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001561999.1 1079329 R 398578 CDS YP_001562000.1 160896418 5746523 1080310..1080987 1 NC_010002.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bpe:BP0523 probable haloacid dehalogenase; HAD family hydrolase 1080987 5746523 Daci_0969 Delftia acidovorans SPH-1 HAD family hydrolase YP_001562000.1 1080310 D 398578 CDS YP_001562001.1 160896419 5746524 1081054..1082067 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: rpc:RPC_3267 uncharacterized protein UPF0065; hypothetical protein 1082067 5746524 Daci_0970 Delftia acidovorans SPH-1 hypothetical protein YP_001562001.1 1081054 D 398578 CDS YP_001562002.1 160896420 5746525 1082087..1083229 1 NC_010002.1 PFAM: alanine racemase domain protein; KEGG: bpe:BP0522 putative metal-activated pyridoxal enzyme; alanine racemase domain-containing protein 1083229 5746525 Daci_0971 Delftia acidovorans SPH-1 alanine racemase domain-containing protein YP_001562002.1 1082087 D 398578 CDS YP_001562003.1 160896421 5746526 1083219..1083614 1 NC_010002.1 PFAM: Endoribonuclease L-PSP; KEGG: bbr:BB0442 hypothetical protein; endoribonuclease L-PSP 1083614 5746526 Daci_0972 Delftia acidovorans SPH-1 endoribonuclease L-PSP YP_001562003.1 1083219 D 398578 CDS YP_001562004.1 160896422 5746527 complement(1083649..1084635) 1 NC_010002.1 TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: ajs:Ajs_3948 magnesium and cobalt transport protein CorA; magnesium and cobalt transport protein CorA 1084635 5746527 Daci_0973 Delftia acidovorans SPH-1 magnesium and cobalt transport protein CorA YP_001562004.1 1083649 R 398578 CDS YP_001562005.1 160896423 5746528 complement(1084809..1085771) 1 NC_010002.1 KEGG: aav:Aave_4571 phage SPO1 DNA polymerase-related protein; phage SPO1 DNA polymerase-like protein 1085771 5746528 Daci_0974 Delftia acidovorans SPH-1 phage SPO1 DNA polymerase-like protein YP_001562005.1 1084809 R 398578 CDS YP_001562006.1 160896424 5746529 complement(1085762..1086211) 1 NC_010002.1 TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: aav:Aave_4570 ribosomal-protein-alanine acetyltransferase; ribosomal-protein-alanine acetyltransferase 1086211 5746529 Daci_0975 Delftia acidovorans SPH-1 ribosomal-protein-alanine acetyltransferase YP_001562006.1 1085762 R 398578 CDS YP_001562007.1 160896425 5746530 complement(1086283..1087134) 1 NC_010002.1 PFAM: peptidase M22 glycoprotease; KEGG: ajs:Ajs_3940 peptidase M22, glycoprotease; peptidase M22 glycoprotease 1087134 5746530 Daci_0976 Delftia acidovorans SPH-1 peptidase M22 glycoprotease YP_001562007.1 1086283 R 398578 CDS YP_001562008.1 160896426 5746531 1087249..1088661 1 NC_010002.1 KEGG: ajs:Ajs_3939 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 1088661 5746531 Daci_0977 Delftia acidovorans SPH-1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase YP_001562008.1 1087249 D 398578 CDS YP_001562009.1 160896427 5746532 1088914..1090047 1 NC_010002.1 PFAM: lipolytic protein G-D-S-L family; KEGG: aav:Aave_4567 phospholipase/lecithinase/hemolysin-like protein; GDSL family lipase 1090047 5746532 Daci_0978 Delftia acidovorans SPH-1 GDSL family lipase YP_001562009.1 1088914 D 398578 CDS YP_001562010.1 160896428 5746533 1090079..1090750 1 NC_010002.1 PFAM: OmpW family protein; KEGG: aav:Aave_4566 OmpW family protein; OmpW family protein 1090750 5746533 Daci_0979 Delftia acidovorans SPH-1 OmpW family protein YP_001562010.1 1090079 D 398578 CDS YP_001562011.1 160896429 5746534 complement(1090815..1092353) 1 NC_010002.1 TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: pol:Bpro_4547 methylmalonate-semialdehyde dehydrogenase; methylmalonate-semialdehyde dehydrogenase 1092353 5746534 Daci_0980 Delftia acidovorans SPH-1 methylmalonate-semialdehyde dehydrogenase YP_001562011.1 1090815 R 398578 CDS YP_001562012.1 160896430 5746535 1092436..1093410 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reu:Reut_B5829 regulatory protein, LysR:LysR, substrate-binding; LysR family transcriptional regulator 1093410 5746535 Daci_0981 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001562012.1 1092436 D 398578 CDS YP_001562013.1 160896431 5746536 complement(1093424..1094404) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: reh:H16_B1814 probable extra-cytoplasmic solute receptor; hypothetical protein 1094404 5746536 Daci_0982 Delftia acidovorans SPH-1 hypothetical protein YP_001562013.1 1093424 R 398578 CDS YP_001562014.1 160896432 5746537 complement(1094447..1095466) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: vei:Veis_0062 uncharacterized protein UPF0065; hypothetical protein 1095466 5746537 Daci_0983 Delftia acidovorans SPH-1 hypothetical protein YP_001562014.1 1094447 R 398578 CDS YP_001562015.1 160896433 5746538 complement(1095511..1096314) 1 NC_010002.1 PFAM: Myo-inositol catabolism IolB domain protein; KEGG: vei:Veis_0068 myo-inositol catabolism IolB domain protein; myo-inositol catabolism IolB domain-containing protein 1096314 5746538 Daci_0984 Delftia acidovorans SPH-1 myo-inositol catabolism IolB domain-containing protein YP_001562015.1 1095511 R 398578 CDS YP_001562016.1 160896434 5746539 complement(1096311..1098290) 1 NC_010002.1 PFAM: PfkB domain protein; KEGG: rso:RSc1240 probable transferase kinase protein; ribokinase-like domain-containing protein 1098290 5746539 Daci_0985 Delftia acidovorans SPH-1 ribokinase-like domain-containing protein YP_001562016.1 1096311 R 398578 CDS YP_001562017.1 160896435 5746540 1098385..1099284 1 NC_010002.1 PFAM: sugar isomerase (SIS); KEGG: vei:Veis_4368 transcriptional regulator, RpiR family; RpiR family transcriptional regulator 1099284 5746540 Daci_0986 Delftia acidovorans SPH-1 RpiR family transcriptional regulator YP_001562017.1 1098385 D 398578 CDS YP_001562018.1 160896436 5746541 complement(1099321..1100025) 1 NC_010002.1 KEGG: ppr:PBPRC0042 hypothetical protein; hypothetical protein 1100025 5746541 Daci_0987 Delftia acidovorans SPH-1 hypothetical protein YP_001562018.1 1099321 R 398578 CDS YP_001562019.1 160896437 5746542 complement(1100225..1101223) 1 NC_010002.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5 domain protein; SUA5/yciO/yrdC domain; KEGG: ajs:Ajs_3936 SUA5/YciO/YrdC/YwlC family protein; Sua5/YciO/YrdC/YwlC family protein 1101223 5746542 Daci_0988 Delftia acidovorans SPH-1 Sua5/YciO/YrdC/YwlC family protein YP_001562019.1 1100225 R 398578 CDS YP_001562020.1 160896438 5746543 complement(1101235..1102398) 1 NC_010002.1 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit 1102398 5746543 Daci_0989 Delftia acidovorans SPH-1 phosphoribosylaminoimidazole carboxylase ATPase subunit YP_001562020.1 1101235 R 398578 CDS YP_001562021.1 160896439 5746544 complement(1102395..1102892) 1 NC_010002.1 KEGG: ajs:Ajs_3934 phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit 1102892 5746544 Daci_0990 Delftia acidovorans SPH-1 phosphoribosylaminoimidazole carboxylase catalytic subunit YP_001562021.1 1102395 R 398578 CDS YP_001562022.1 160896440 5746545 complement(1102976..1104364) 1 NC_010002.1 KEGG: mpt:Mpe_A0314 hypothetical protein; hypothetical protein 1104364 5746545 Daci_0991 Delftia acidovorans SPH-1 hypothetical protein YP_001562022.1 1102976 R 398578 CDS YP_001562023.1 160896441 5746546 complement(1104361..1105347) 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A0313 ABC-type multidrug transport system ATPase component-like protein; ABC transporter-like protein 1105347 5746546 Daci_0992 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001562023.1 1104361 R 398578 CDS YP_001562024.1 160896442 5746547 1105623..1106579 1 NC_010002.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: ajs:Ajs_3931 thioredoxin; thioredoxin 1106579 5746547 Daci_0993 Delftia acidovorans SPH-1 thioredoxin YP_001562024.1 1105623 D 398578 CDS YP_001562025.1 160896443 5746548 complement(1106644..1107462) 1 NC_010002.1 KEGG: bur:Bcep18194_A5272 hypothetical protein; hypothetical protein 1107462 5746548 Daci_0994 Delftia acidovorans SPH-1 hypothetical protein YP_001562025.1 1106644 R 398578 CDS YP_001562026.1 160896444 5746549 1107547..1108458 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A5271 transcriptional regulator, LysR family; LysR family transcriptional regulator 1108458 5746549 Daci_0995 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001562026.1 1107547 D 398578 CDS YP_001562027.1 160896445 5746550 complement(1108462..1109358) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mpt:Mpe_A1047 transcriptional regulator, LysR family; LysR family transcriptional regulator 1109358 5746550 Daci_0996 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001562027.1 1108462 R 398578 CDS YP_001562028.1 160896446 5746551 1109453..1110313 1 NC_010002.1 KEGG: pol:Bpro_4689 protein of unknown function DUF6, transmembrane; hypothetical protein 1110313 5746551 Daci_0997 Delftia acidovorans SPH-1 hypothetical protein YP_001562028.1 1109453 D 398578 CDS YP_001562029.1 160896447 5746552 complement(1110343..1110927) 1 NC_010002.1 TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: ajs:Ajs_3932 intracellular protease, PfpI family; PfpI family intracellular peptidase 1110927 5746552 Daci_0998 Delftia acidovorans SPH-1 PfpI family intracellular peptidase YP_001562029.1 1110343 R 398578 CDS YP_001562030.1 160896448 5746553 complement(1111086..1112009) 1 NC_010002.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 1112009 5746553 Daci_0999 Delftia acidovorans SPH-1 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_001562030.1 1111086 R 398578 CDS YP_001562031.1 160896449 5746554 1112374..1112733 1 NC_010002.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: ajs:Ajs_3927 sigma 54 modulation protein/ribosomal protein S30EA; sigma 54 modulation protein/30S ribosomal protein S30EA 1112733 5746554 Daci_1000 Delftia acidovorans SPH-1 sigma 54 modulation protein/30S ribosomal protein S30EA YP_001562031.1 1112374 D 398578 CDS YP_001562032.1 160896450 5746555 1112829..1113362 1 NC_010002.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: aav:Aave_4557 putative PTS IIA-like nitrogen-regulatory protein PtsN; putative PTS IIA-like nitrogen-regulatory protein PtsN 1113362 5746555 Daci_1001 Delftia acidovorans SPH-1 putative PTS IIA-like nitrogen-regulatory protein PtsN YP_001562032.1 1112829 D 398578 CDS YP_001562033.1 160896451 5746556 1113403..1114359 1 NC_010002.1 catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system; HPr kinase/phosphorylase 1114359 5746556 Daci_1002 Delftia acidovorans SPH-1 HPr kinase/phosphorylase YP_001562033.1 1113403 D 398578 CDS YP_001562034.1 160896452 5746557 1114513..1116789 1 NC_010002.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pen:PSEEN4326 TonB-dependent ferric siderophore receptor; TonB-dependent siderophore receptor 1116789 5746557 Daci_1003 Delftia acidovorans SPH-1 TonB-dependent siderophore receptor YP_001562034.1 1114513 D 398578 CDS YP_001562035.1 160896453 5746558 1116794..1118569 1 NC_010002.1 PFAM: putative esterase; KEGG: bur:Bcep18194_A5450 putative esterase; putative esterase 1118569 5746558 Daci_1004 Delftia acidovorans SPH-1 putative esterase YP_001562035.1 1116794 D 398578 CDS YP_001562036.1 160896454 5746559 1118569..1119594 1 NC_010002.1 PFAM: periplasmic binding protein; KEGG: oan:Oant_3797 periplasmic binding protein; periplasmic-binding protein 1119594 5746559 Daci_1005 Delftia acidovorans SPH-1 periplasmic-binding protein YP_001562036.1 1118569 D 398578 CDS YP_001562037.1 160896455 5746560 1119575..1120624 1 NC_010002.1 PFAM: transport system permease protein; KEGG: bov:BOV_A0633 iron compound ABC transporter, permease protein; transport system permease 1120624 5746560 Daci_1006 Delftia acidovorans SPH-1 transport system permease YP_001562037.1 1119575 D 398578 CDS YP_001562038.1 160896456 5746561 1120621..1121619 1 NC_010002.1 PFAM: transport system permease protein; KEGG: atc:AGR_C_4491 ferrichrome ABC transporter (permease) homolog; transport system permease 1121619 5746561 Daci_1007 Delftia acidovorans SPH-1 transport system permease YP_001562038.1 1120621 D 398578 CDS YP_001562039.1 160896457 5746562 1121616..1122374 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aau:AAur_3854 putative iron ABC transporter, ATP-binding protein; ABC transporter-like protein 1122374 5746562 Daci_1008 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001562039.1 1121616 D 398578 CDS YP_001562040.1 160896458 5746563 complement(1122555..1123721) 1 NC_010002.1 TIGRFAM: S-adenosylmethionine--tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; KEGG: ajs:Ajs_0374 S-adenosylmethionine--tRNA-ribosyltransferase-isomerase; S-adenosylmethionine--tRNA-ribosyltransferase- isomerase 1123721 5746563 Daci_1009 Delftia acidovorans SPH-1 S-adenosylmethionine--tRNA-ribosyltransferase- isomerase YP_001562040.1 1122555 R 398578 CDS YP_001562041.1 160896459 5746564 complement(1123754..1125013) 1 NC_010002.1 KEGG: aav:Aave_0592 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; Metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase 1125013 5746564 Daci_1010 Delftia acidovorans SPH-1 metal dependent phosphohydrolase YP_001562041.1 1123754 R 398578 CDS YP_001562042.1 160896460 5746565 1125208..1127448 1 NC_010002.1 catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 1127448 5746565 Daci_1011 Delftia acidovorans SPH-1 ATP-dependent DNA helicase RecG YP_001562042.1 1125208 D 398578 CDS YP_001562043.1 160896461 5746566 1127785..1128558 1 NC_010002.1 PFAM: MHYT domain protein; KEGG: bbr:BB1820 hypothetical protein; putative integral membrane sensor protein 1128558 5746566 Daci_1012 Delftia acidovorans SPH-1 putative integral membrane sensor protein YP_001562043.1 1127785 D 398578 CDS YP_001562044.1 160896462 5746567 1128785..1129750 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_0377 transcriptional regulator, LysR family; LysR family transcriptional regulator 1129750 5746567 Daci_1013 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001562044.1 1128785 D 398578 CDS YP_001562045.1 160896463 5746568 1129871..1130476 1 NC_010002.1 PFAM: Ferritin Dps family protein; KEGG: ajs:Ajs_0378 ferritin, Dps family protein; ferritin Dps family protein 1130476 5746568 Daci_1014 Delftia acidovorans SPH-1 ferritin Dps family protein YP_001562045.1 1129871 D 398578 CDS YP_001562046.1 160896464 5746569 1130536..1131333 1 NC_010002.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: aav:Aave_3491 phosphoesterase, PA-phosphatase related protein; phosphoesterase PA-phosphatase-like protein 1131333 5746569 Daci_1015 Delftia acidovorans SPH-1 phosphoesterase PA-phosphatase-like protein YP_001562046.1 1130536 D 398578 CDS YP_001562047.1 160896465 5746570 1131435..1132328 1 NC_010002.1 TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; PFAM: UbiA prenyltransferase; KEGG: ajs:Ajs_0380 4-hydroxybenzoate polyprenyl transferase; 4-hydroxybenzoate polyprenyltransferase 1132328 5746570 Daci_1016 Delftia acidovorans SPH-1 4-hydroxybenzoate polyprenyltransferase YP_001562047.1 1131435 D 398578 CDS YP_001562048.1 160896466 5746571 complement(1132401..1133240) 1 NC_010002.1 KEGG: ajs:Ajs_0381 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; pyrroline-5-carboxylate reductase 1133240 5746571 Daci_1017 Delftia acidovorans SPH-1 pyrroline-5-carboxylate reductase YP_001562048.1 1132401 R 398578 CDS YP_001562049.1 160896467 5746572 complement(1133273..1134064) 1 NC_010002.1 KEGG: rpa:RPA2648 hypothetical protein; hypothetical protein 1134064 5746572 Daci_1018 Delftia acidovorans SPH-1 hypothetical protein YP_001562049.1 1133273 R 398578 CDS YP_001562050.1 160896468 5746573 complement(1134104..1135096) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: rme:Rmet_5038 uncharacterized protein UPF0065; hypothetical protein 1135096 5746573 Daci_1019 Delftia acidovorans SPH-1 hypothetical protein YP_001562050.1 1134104 R 398578 CDS YP_001562051.1 160896469 5746574 complement(1135161..1136858) 1 NC_010002.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: reh:H16_B0313 acetolactate synthase large subunit (TPP dependent); thiamine pyrophosphate-binding domain-containing protein 1136858 5746574 Daci_1020 Delftia acidovorans SPH-1 thiamine pyrophosphate-binding domain-containing protein YP_001562051.1 1135161 R 398578 CDS YP_001562052.1 160896470 5746575 1136955..1137650 1 NC_010002.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: reh:H16_B0314 transcriptional regulator, GntR-family; GntR family transcriptional regulator 1137650 5746575 Daci_1021 Delftia acidovorans SPH-1 GntR family transcriptional regulator YP_001562052.1 1136955 D 398578 CDS YP_001562053.1 160896471 5746576 complement(1137658..1138863) 1 NC_010002.1 KEGG: aav:Aave_3774 hypothetical protein; hypothetical protein 1138863 5746576 Daci_1022 Delftia acidovorans SPH-1 hypothetical protein YP_001562053.1 1137658 R 398578 CDS YP_001562054.1 160896472 5746577 complement(1138832..1140328) 1 NC_010002.1 TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: ajs:Ajs_0382 glycerol kinase; glycerol kinase 1140328 5746577 Daci_1023 Delftia acidovorans SPH-1 glycerol kinase YP_001562054.1 1138832 R 398578 CDS YP_001562055.1 160896473 5746578 complement(1140402..1141166) 1 NC_010002.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: aav:Aave_0603 transcriptional regulator, DeoR family; DeoR family transcriptional regulator 1141166 5746578 Daci_1024 Delftia acidovorans SPH-1 DeoR family transcriptional regulator YP_001562055.1 1140402 R 398578 CDS YP_001562056.1 160896474 5746579 1141353..1142516 1 NC_010002.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: aav:Aave_0604 ABC transporter-related protein; ABC transporter-like protein 1142516 5746579 Daci_1025 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001562056.1 1141353 D 398578 CDS YP_001562057.1 160896475 5746580 1142518..1143600 1 NC_010002.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: aav:Aave_0605 ABC transporter-related protein; ABC transporter-like protein 1143600 5746580 Daci_1026 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001562057.1 1142518 D 398578 CDS YP_001562058.1 160896476 5746581 1143597..1144490 1 NC_010002.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_0606 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1144490 5746581 Daci_1027 Delftia acidovorans SPH-1 binding-protein-dependent transport system inner membrane protein YP_001562058.1 1143597 D 398578 CDS YP_001562059.1 160896477 5746582 1144566..1145381 1 NC_010002.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_0387 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1145381 5746582 Daci_1028 Delftia acidovorans SPH-1 binding-protein-dependent transport system inner membrane protein YP_001562059.1 1144566 D 398578 CDS YP_001562060.1 160896478 5746583 1145542..1145850 1 NC_010002.1 KEGG: ajs:Ajs_0388 putative integral membrane protein; putative integral membrane protein 1145850 5746583 Daci_1029 Delftia acidovorans SPH-1 putative integral membrane protein YP_001562060.1 1145542 D 398578 CDS YP_001562061.1 160896479 5746584 1145951..1147684 1 NC_010002.1 KEGG: aav:Aave_0609 extracellular solute-binding protein, family 1; extracellular solute-binding protein 1147684 5746584 Daci_1030 Delftia acidovorans SPH-1 extracellular solute-binding protein YP_001562061.1 1145951 D 398578 CDS YP_001562062.1 160896480 5746585 1148029..1149618 1 NC_010002.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: aav:Aave_0610 FAD dependent oxidoreductase; FAD dependent oxidoreductase 1149618 5746585 Daci_1031 Delftia acidovorans SPH-1 FAD dependent oxidoreductase YP_001562062.1 1148029 D 398578 CDS YP_001562063.1 160896481 5746586 1150307..1150675 1 NC_010002.1 TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e; KEGG: vei:Veis_2315 ribosomal protein L14; 50S ribosomal protein L14 1150675 5746586 Daci_1032 Delftia acidovorans SPH-1 50S ribosomal protein L14 YP_001562063.1 1150307 D 398578 CDS YP_001562064.1 160896482 5746587 1150686..1151006 1 NC_010002.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 1151006 rplX 5746587 rplX Delftia acidovorans SPH-1 50S ribosomal protein L24 YP_001562064.1 1150686 D 398578 CDS YP_001562065.1 160896483 5746588 1151017..1151556 1 NC_010002.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 1151556 rplE 5746588 rplE Delftia acidovorans SPH-1 50S ribosomal protein L5 YP_001562065.1 1151017 D 398578 CDS YP_001562066.1 160896484 5746589 1151565..1151870 1 NC_010002.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 1151870 rpsN 5746589 rpsN Delftia acidovorans SPH-1 30S ribosomal protein S14 YP_001562066.1 1151565 D 398578 CDS YP_001562067.1 160896485 5746590 1151891..1152286 1 NC_010002.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 1152286 rpsH 5746590 rpsH Delftia acidovorans SPH-1 30S ribosomal protein S8 YP_001562067.1 1151891 D 398578 CDS YP_001562068.1 160896486 5746591 1152311..1152844 1 NC_010002.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 1152844 rplF 5746591 rplF Delftia acidovorans SPH-1 50S ribosomal protein L6 YP_001562068.1 1152311 D 398578 CDS YP_001562069.1 160896487 5746592 1152856..1153221 1 NC_010002.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 1153221 rplR 5746592 rplR Delftia acidovorans SPH-1 50S ribosomal protein L18 YP_001562069.1 1152856 D 398578 CDS YP_001562070.1 160896488 5746593 1153237..1153758 1 NC_010002.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 1153758 rpsE 5746593 rpsE Delftia acidovorans SPH-1 30S ribosomal protein S5 YP_001562070.1 1153237 D 398578 CDS YP_001562071.1 160896489 5746594 1153773..1153955 1 NC_010002.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 1153955 rpmD 5746594 rpmD Delftia acidovorans SPH-1 50S ribosomal protein L30 YP_001562071.1 1153773 D 398578 CDS YP_001562072.1 160896490 5746595 1153967..1154398 1 NC_010002.1 late assembly protein; 50S ribosomal protein L15 1154398 rplO 5746595 rplO Delftia acidovorans SPH-1 50S ribosomal protein L15 YP_001562072.1 1153967 D 398578 CDS YP_001562073.1 160896491 5746596 1154423..1155742 1 NC_010002.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 1155742 secY 5746596 secY Delftia acidovorans SPH-1 preprotein translocase subunit SecY YP_001562073.1 1154423 D 398578 CDS YP_001562074.1 160896492 5746598 1156011..1156376 1 NC_010002.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 1156376 rpsM 5746598 rpsM Delftia acidovorans SPH-1 30S ribosomal protein S13 YP_001562074.1 1156011 D 398578 CDS YP_001562075.1 160896493 5746599 1156395..1156799 1 NC_010002.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 1156799 5746599 Daci_1045 Delftia acidovorans SPH-1 30S ribosomal protein S11 YP_001562075.1 1156395 D 398578 CDS YP_001562076.1 160896494 5746600 1156890..1157513 1 NC_010002.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 1157513 rpsD 5746600 rpsD Delftia acidovorans SPH-1 30S ribosomal protein S4 YP_001562076.1 1156890 D 398578 CDS YP_001562077.1 160896495 5746601 1157626..1158624 1 NC_010002.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 1158624 5746601 Daci_1047 Delftia acidovorans SPH-1 DNA-directed RNA polymerase subunit alpha YP_001562077.1 1157626 D 398578 CDS YP_001562078.1 160896496 5746602 1158811..1159203 1 NC_010002.1 PFAM: ribosomal protein L17; KEGG: ajs:Ajs_0407 ribosomal protein L17; 50S ribosomal protein L17 1159203 5746602 Daci_1048 Delftia acidovorans SPH-1 50S ribosomal protein L17 YP_001562078.1 1158811 D 398578 CDS YP_001562079.1 160896497 5746604 complement(1159384..1159701) 1 NC_010002.1 KEGG: rso:RS02287 hypothetical protein; hypothetical protein 1159701 5746604 Daci_1049 Delftia acidovorans SPH-1 hypothetical protein YP_001562079.1 1159384 R 398578 CDS YP_001562080.1 160896498 5746605 1159996..1161501 1 NC_010002.1 TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; KEGG: rme:Rmet_4303 anion transporter; anion transporter 1161501 5746605 Daci_1050 Delftia acidovorans SPH-1 anion transporter YP_001562080.1 1159996 D 398578 CDS YP_001562081.1 160896499 5746606 complement(1161514..1162101) 1 NC_010002.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase; KEGG: bja:bll6900 hypothetical protein; hypothetical protein 1162101 5746606 Daci_1051 Delftia acidovorans SPH-1 hypothetical protein YP_001562081.1 1161514 R 398578 CDS YP_001562082.1 160896500 5746607 complement(1162098..1162793) 1 NC_010002.1 KEGG: bbt:BBta_4849 hypothetical protein; hypothetical protein 1162793 5746607 Daci_1052 Delftia acidovorans SPH-1 hypothetical protein YP_001562082.1 1162098 R 398578 CDS YP_001562083.1 160896501 5746608 complement(1162790..1163920) 1 NC_010002.1 PFAM: luciferase family protein; KEGG: bbt:BBta_4850 hypothetical protein; luciferase family protein 1163920 5746608 Daci_1053 Delftia acidovorans SPH-1 luciferase family protein YP_001562083.1 1162790 R 398578 CDS YP_001562084.1 160896502 5746609 complement(1163901..1165592) 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA0072 ABC transporter ATP-binding protein; ABC transporter-like protein 1165592 5746609 Daci_1054 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001562084.1 1163901 R 398578 CDS YP_001562085.1 160896503 5746610 complement(1165589..1166545) 1 NC_010002.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_4852 putative ABC transporter (permease protein); binding-protein-dependent transport system inner membrane protein 1166545 5746610 Daci_1055 Delftia acidovorans SPH-1 binding-protein-dependent transport system inner membrane protein YP_001562085.1 1165589 R 398578 CDS YP_001562086.1 160896504 5746611 complement(1166542..1167489) 1 NC_010002.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA0074 ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 1167489 5746611 Daci_1056 Delftia acidovorans SPH-1 binding-protein-dependent transport system inner membrane protein YP_001562086.1 1166542 R 398578 CDS YP_001562087.1 160896505 5746612 complement(1167518..1169191) 1 NC_010002.1 PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA0075 ABC-type transporter, substrate binding protein; extracellular solute-binding protein 1169191 5746612 Daci_1057 Delftia acidovorans SPH-1 extracellular solute-binding protein YP_001562087.1 1167518 R 398578 CDS YP_001562088.1 160896506 5746613 1169393..1169995 1 NC_010002.1 PFAM: OsmC family protein; KEGG: bur:Bcep18194_C7506 hypothetical protein; OsmC family protein 1169995 5746613 Daci_1058 Delftia acidovorans SPH-1 OsmC family protein YP_001562088.1 1169393 D 398578 CDS YP_001562089.1 160896507 5746614 1170021..1170845 1 NC_010002.1 KEGG: rpa:RPA2648 hypothetical protein; hypothetical protein 1170845 5746614 Daci_1059 Delftia acidovorans SPH-1 hypothetical protein YP_001562089.1 1170021 D 398578 CDS YP_001562090.1 160896508 5746615 1170887..1172218 1 NC_010002.1 KEGG: aav:Aave_0628 molecular chaperone, HSP70 class; molecular chaperone, HSP70 class 1172218 5746615 Daci_1060 Delftia acidovorans SPH-1 molecular chaperone, HSP70 class YP_001562090.1 1170887 D 398578 CDS YP_001562091.1 160896509 5746616 complement(1172344..1173285) 1 NC_010002.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: aav:Aave_0629 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase; uroporphyrin-III C/tetrapyrrole methyltransferase 1173285 5746616 Daci_1061 Delftia acidovorans SPH-1 uroporphyrin-III C/tetrapyrrole methyltransferase YP_001562091.1 1172344 R 398578 CDS YP_001562092.1 160896510 5746617 1173285..1173701 1 NC_010002.1 PFAM: protein of unknown function UPF0102; KEGG: aav:Aave_0630 protein of unknown function UPF0102; hypothetical protein 1173701 5746617 Daci_1062 Delftia acidovorans SPH-1 hypothetical protein YP_001562092.1 1173285 D 398578 CDS YP_001562093.1 160896511 5746618 1173775..1174383 1 NC_010002.1 KEGG: ajs:Ajs_0415 phosphoheptose isomerase; phosphoheptose isomerase 1174383 5746618 Daci_1063 Delftia acidovorans SPH-1 phosphoheptose isomerase YP_001562093.1 1173775 D 398578 CDS YP_001562094.1 160896512 5746619 1174380..1175111 1 NC_010002.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: vei:Veis_0628 transport-associated; transport-associated protein 1175111 5746619 Daci_1064 Delftia acidovorans SPH-1 transport-associated protein YP_001562094.1 1174380 D 398578 CDS YP_001562095.1 160896513 5746620 complement(1175311..1176222) 1 NC_010002.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: ajs:Ajs_0417 3-hydroxyisobutyrate dehydrogenase; 3-hydroxyisobutyrate dehydrogenase 1176222 5746620 Daci_1065 Delftia acidovorans SPH-1 3-hydroxyisobutyrate dehydrogenase YP_001562095.1 1175311 R 398578 CDS YP_001562096.1 160896514 5746621 complement(1176348..1177484) 1 NC_010002.1 TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: aav:Aave_0635 twitching motility protein; twitching motility protein 1177484 5746621 Daci_1066 Delftia acidovorans SPH-1 twitching motility protein YP_001562096.1 1176348 R 398578 CDS YP_001562097.1 160896515 5746622 complement(1177606..1178238) 1 NC_010002.1 PFAM: cyclic nucleotide-binding; KEGG: aav:Aave_0636 cyclic nucleotide-binding protein; cyclic nucleotide-binding protein 1178238 5746622 Daci_1067 Delftia acidovorans SPH-1 cyclic nucleotide-binding protein YP_001562097.1 1177606 R 398578 CDS YP_001562098.1 160896516 5746623 complement(1178270..1179313) 1 NC_010002.1 TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: aav:Aave_0637 twitching motility protein; twitching motility protein 1179313 5746623 Daci_1068 Delftia acidovorans SPH-1 twitching motility protein YP_001562098.1 1178270 R 398578 CDS YP_001562099.1 160896517 5746624 1179351..1180076 1 NC_010002.1 PFAM: alanine racemase domain protein; KEGG: aav:Aave_0638 alanine racemase domain protein; alanine racemase domain-containing protein 1180076 5746624 Daci_1069 Delftia acidovorans SPH-1 alanine racemase domain-containing protein YP_001562099.1 1179351 D 398578 CDS YP_001562100.1 160896518 5746625 complement(1180115..1181398) 1 NC_010002.1 PFAM: Extracellular ligand-binding receptor; KEGG: vei:Veis_1685 extracellular ligand-binding receptor; extracellular ligand-binding receptor 1181398 5746625 Daci_1070 Delftia acidovorans SPH-1 extracellular ligand-binding receptor YP_001562100.1 1180115 R 398578 CDS YP_001562101.1 160896519 5746626 complement(1181425..1182147) 1 NC_010002.1 PFAM: regulatory protein TetR; KEGG: rfr:Rfer_3897 transcriptional regulator, TetR family; TetR family transcriptional regulator 1182147 5746626 Daci_1071 Delftia acidovorans SPH-1 TetR family transcriptional regulator YP_001562101.1 1181425 R 398578 CDS YP_001562102.1 160896520 5746627 1182307..1183905 1 NC_010002.1 PFAM: AMP-dependent synthetase and ligase; KEGG: vei:Veis_1683 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 1183905 5746627 Daci_1072 Delftia acidovorans SPH-1 AMP-dependent synthetase/ligase YP_001562102.1 1182307 D 398578 CDS YP_001562103.1 160896521 5746628 1184052..1187345 1 NC_010002.1 PFAM: carboxyl transferase; biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: vei:Veis_1682 carbamoyl-phosphate synthase L chain, ATP-binding; carbamoyl-phosphate synthase subunit L 1187345 5746628 Daci_1073 Delftia acidovorans SPH-1 carbamoyl-phosphate synthase subunit L YP_001562103.1 1184052 D 398578 CDS YP_001562104.1 160896522 5746629 1187446..1188588 1 NC_010002.1 PFAM: aminotransferase class V; KEGG: ajs:Ajs_0422 aminotransferase, class V; class V aminotransferase 1188588 5746629 Daci_1074 Delftia acidovorans SPH-1 class V aminotransferase YP_001562104.1 1187446 D 398578 CDS YP_001562105.1 160896523 5746630 1188622..1189041 1 NC_010002.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: ajs:Ajs_1935 peptidylprolyl isomerase, FKBP-type; peptidyl-prolyl isomerase 1189041 5746630 Daci_1075 Delftia acidovorans SPH-1 peptidyl-prolyl isomerase YP_001562105.1 1188622 D 398578 CDS YP_001562106.1 160896524 5746631 1189130..1190044 1 NC_010002.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: rfr:Rfer_0410 protein of unknown function DUF6, transmembrane; hypothetical protein 1190044 5746631 Daci_1076 Delftia acidovorans SPH-1 hypothetical protein YP_001562106.1 1189130 D 398578 CDS YP_001562107.1 160896525 5746632 complement(1190054..1191235) 1 NC_010002.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: pde:Pden_3305 filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein fic 1191235 5746632 Daci_1077 Delftia acidovorans SPH-1 filamentation induced by cAMP protein fic YP_001562107.1 1190054 R 398578 CDS YP_001562108.1 160896526 5746633 complement(1191360..1192931) 1 NC_010002.1 Required for the expression of anaerobic nitric oxide (NO) reductase; acts as a transcriptional activator for the norVW operon; anaerobic nitric oxide reductase transcriptional regulator 1192931 5746633 Daci_1078 Delftia acidovorans SPH-1 anaerobic nitric oxide reductase transcriptional regulator YP_001562108.1 1191360 R 398578 CDS YP_001562109.1 160896527 5746634 1193052..1194278 1 NC_010002.1 flavohemoprotein; catalyzes the formation of nitrate from nitric oxide; can also catalyze the reduction of dihydropteridine; nitric oxide dioxygenase 1194278 5746634 Daci_1079 Delftia acidovorans SPH-1 nitric oxide dioxygenase YP_001562109.1 1193052 D 398578 CDS YP_001562110.1 160896528 5746635 complement(1194358..1196268) 1 NC_010002.1 KEGG: aav:Aave_0649 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 1196268 5746635 Daci_1080 Delftia acidovorans SPH-1 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_001562110.1 1194358 R 398578 CDS YP_001562111.1 160896529 5746636 1196312..1197235 1 NC_010002.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase 1197235 purU 5746636 purU Delftia acidovorans SPH-1 formyltetrahydrofolate deformylase YP_001562111.1 1196312 D 398578 CDS YP_001562112.1 160896530 5746637 1197255..1198178 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_0647 transcriptional regulator, LysR family; LysR family transcriptional regulator 1198178 5746637 Daci_1082 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001562112.1 1197255 D 398578 CDS YP_001562113.1 160896531 5746638 1198279..1199832 1 NC_010002.1 PFAM: FAD linked oxidase domain protein; KEGG: aav:Aave_0645 FAD linked oxidase domain protein; FAD linked oxidase domain-containing protein 1199832 5746638 Daci_1083 Delftia acidovorans SPH-1 FAD linked oxidase domain-containing protein YP_001562113.1 1198279 D 398578 CDS YP_001562114.1 160896532 5746639 complement(1199909..1200931) 1 NC_010002.1 KEGG: cfa:482083 plectin 1, intermediate filament binding protein 500kDa; hypothetical protein 1200931 5746639 Daci_1084 Delftia acidovorans SPH-1 hypothetical protein YP_001562114.1 1199909 R 398578 CDS YP_001562115.1 160896533 5746640 1201095..1201472 1 NC_010002.1 KEGG: aav:Aave_0643 hypothetical protein; hypothetical protein 1201472 5746640 Daci_1085 Delftia acidovorans SPH-1 hypothetical protein YP_001562115.1 1201095 D 398578 CDS YP_001562116.1 160896534 5746641 complement(1201535..1201885) 1 NC_010002.1 KEGG: ajs:Ajs_2662 hypothetical protein; hypothetical protein 1201885 5746641 Daci_1086 Delftia acidovorans SPH-1 hypothetical protein YP_001562116.1 1201535 R 398578 CDS YP_001562117.1 160896535 5746642 complement(1202095..1205280) 1 NC_010002.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: ajs:Ajs_1849 heavy metal efflux pump, CzcA family; CzcA family heavy metal efflux protein 1205280 5746642 Daci_1087 Delftia acidovorans SPH-1 CzcA family heavy metal efflux protein YP_001562117.1 1202095 R 398578 CDS YP_001562118.1 160896536 5746643 complement(1205292..1206671) 1 NC_010002.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mms:mma_1793 cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family; RND family efflux transporter MFP subunit 1206671 5746643 Daci_1088 Delftia acidovorans SPH-1 RND family efflux transporter MFP subunit YP_001562118.1 1205292 R 398578 CDS YP_001562119.1 160896537 5746644 complement(1206702..1208036) 1 NC_010002.1 PFAM: outer membrane efflux protein; KEGG: har:HEAR1614 cobalt-zinc-cadmium resistance protein CzcC precursor (cation efflux system protein CzcC); outer membrane efflux protein 1208036 5746644 Daci_1089 Delftia acidovorans SPH-1 outer membrane efflux protein YP_001562119.1 1206702 R 398578 CDS YP_001562120.1 160896538 5746645 complement(1208204..1208620) 1 NC_010002.1 KEGG: ajs:Ajs_1846 hypothetical protein; hypothetical protein 1208620 5746645 Daci_1090 Delftia acidovorans SPH-1 hypothetical protein YP_001562120.1 1208204 R 398578 CDS YP_001562121.1 160896539 5746646 1208765..1209463 1 NC_010002.1 TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mpt:Mpe_A1629 two-component response regulator; two component heavy metal response transcriptional regulator 1209463 5746646 Daci_1091 Delftia acidovorans SPH-1 two component heavy metal response transcriptional regulator YP_001562121.1 1208765 D 398578 CDS YP_001562122.1 160896540 5746647 1209460..1210854 1 NC_010002.1 TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mpt:Mpe_A1630 putative two-component sensor; heavy metal sensor signal transduction histidine kinase 1210854 5746647 Daci_1092 Delftia acidovorans SPH-1 heavy metal sensor signal transduction histidine kinase YP_001562122.1 1209460 D 398578 CDS YP_001562123.1 160896541 5746648 1210890..1211318 1 NC_010002.1 hypothetical protein 1211318 5746648 Daci_1093 Delftia acidovorans SPH-1 hypothetical protein YP_001562123.1 1210890 D 398578 CDS YP_001562124.1 160896542 5746649 complement(1211326..1211763) 1 NC_010002.1 PFAM: thioesterase superfamily protein; KEGG: reh:H16_A0241 uncharacterized protein, possibly involved in aromatic compounds catabolism; thioesterase superfamily protein 1211763 5746649 Daci_1094 Delftia acidovorans SPH-1 thioesterase superfamily protein YP_001562124.1 1211326 R 398578 CDS YP_001562125.1 160896543 5746650 complement(1211760..1211984) 1 NC_010002.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: vei:Veis_0828 biotin/lipoyl attachment domain-containing protein; biotin/lipoyl attachment domain-containing protein 1211984 5746650 Daci_1095 Delftia acidovorans SPH-1 biotin/lipoyl attachment domain-containing protein YP_001562125.1 1211760 R 398578 CDS YP_001562126.1 160896544 5746651 complement(1211996..1213357) 1 NC_010002.1 PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: bbr:BB2689 biotin carboxylase; carbamoyl-phosphate synthase subunit L 1213357 5746651 Daci_1096 Delftia acidovorans SPH-1 carbamoyl-phosphate synthase subunit L YP_001562126.1 1211996 R 398578 CDS YP_001562127.1 160896545 5746652 complement(1213354..1215462) 1 NC_010002.1 PFAM: CoA-binding domain protein; KEGG: vei:Veis_0829 CoA-binding domain protein; CoA-binding domain-containing protein 1215462 5746652 Daci_1097 Delftia acidovorans SPH-1 CoA-binding domain-containing protein YP_001562127.1 1213354 R 398578 CDS YP_001562128.1 160896546 5746653 complement(1215473..1216492) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: rme:Rmet_4969 uncharacterized protein UPF0065; hypothetical protein 1216492 5746653 Daci_1098 Delftia acidovorans SPH-1 hypothetical protein YP_001562128.1 1215473 R 398578 CDS YP_001562129.1 160896547 5746654 complement(1216522..1218069) 1 NC_010002.1 PFAM: carboxyl transferase; KEGG: reu:Reut_B3891 propionyl-CoA carboxylase; propionyl-CoA carboxylase 1218069 5746654 Daci_1099 Delftia acidovorans SPH-1 propionyl-CoA carboxylase YP_001562129.1 1216522 R 398578 CDS YP_001562130.1 160896548 5746655 1218214..1219974 1 NC_010002.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: reu:Reut_B3890 helix-turn-helix, fis-type; putative sigma-54 specific transcriptional regulator 1219974 5746655 Daci_1100 Delftia acidovorans SPH-1 putative sigma-54 specific transcriptional regulator YP_001562130.1 1218214 D 398578 CDS YP_001562131.1 160896549 5746656 1220102..1221073 1 NC_010002.1 PFAM: Bile acid:sodium symporter; KEGG: dar:Daro_2614 putative efflux protein; bile acid:sodium symporter 1221073 5746656 Daci_1101 Delftia acidovorans SPH-1 bile acid:sodium symporter YP_001562131.1 1220102 D 398578 CDS YP_001562132.1 160896550 5746657 complement(1221074..1222402) 1 NC_010002.1 PFAM: protein of unknown function DUF445; KEGG: aav:Aave_0641 protein of unknown function DUF445; hypothetical protein 1222402 5746657 Daci_1102 Delftia acidovorans SPH-1 hypothetical protein YP_001562132.1 1221074 R 398578 CDS YP_001562133.1 160896551 5746658 1222500..1222757 1 NC_010002.1 KEGG: aav:Aave_0028 hypothetical protein; hypothetical protein 1222757 5746658 Daci_1103 Delftia acidovorans SPH-1 hypothetical protein YP_001562133.1 1222500 D 398578 CDS YP_001562134.1 160896552 5746659 complement(1222809..1223684) 1 NC_010002.1 KEGG: ajs:Ajs_0430 hypothetical protein; hypothetical protein 1223684 5746659 Daci_1104 Delftia acidovorans SPH-1 hypothetical protein YP_001562134.1 1222809 R 398578 CDS YP_001562135.1 160896553 5746660 1223846..1225744 1 NC_010002.1 PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: ajs:Ajs_0432 multi-sensor signal transduction histidine kinase; GAF sensor signal transduction histidine kinase 1225744 5746660 Daci_1105 Delftia acidovorans SPH-1 GAF sensor signal transduction histidine kinase YP_001562135.1 1223846 D 398578 CDS YP_001562136.1 160896554 5746661 1225773..1226444 1 NC_010002.1 PFAM: regulatory protein LuxR; response regulator receiver; Bacterio-opsin activator HTH domain protein; KEGG: ajs:Ajs_0433 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 1226444 5746661 Daci_1106 Delftia acidovorans SPH-1 two component LuxR family transcriptional regulator YP_001562136.1 1225773 D 398578 CDS YP_001562137.1 160896555 5746662 1226870..1228192 1 NC_010002.1 PFAM: major facilitator superfamily MFS_1; KEGG: aav:Aave_0659 major facilitator superfamily MFS_1; major facilitator transporter 1228192 5746662 Daci_1107 Delftia acidovorans SPH-1 major facilitator transporter YP_001562137.1 1226870 D 398578 CDS YP_001562138.1 160896556 5746663 1228209..1229669 1 NC_010002.1 TIGRFAM: nitrite transporter; PFAM: major facilitator superfamily MFS_1; KEGG: aav:Aave_0660 nitrite transporter; nitrite transporter 1229669 5746663 Daci_1108 Delftia acidovorans SPH-1 nitrite transporter YP_001562138.1 1228209 D 398578 CDS YP_001562139.1 160896557 5746664 1229737..1233576 1 NC_010002.1 TIGRFAM: nitrate reductase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: ajs:Ajs_0436 nitrate reductase, alpha subunit; nitrate reductase subunit alpha 1233576 5746664 Daci_1109 Delftia acidovorans SPH-1 nitrate reductase subunit alpha YP_001562139.1 1229737 D 398578 CDS YP_001562140.1 160896558 5746665 1233754..1235295 1 NC_010002.1 TIGRFAM: nitrate reductase, beta subunit; KEGG: ajs:Ajs_0437 nitrate reductase, beta subunit; nitrate reductase subunit beta 1235295 5746665 Daci_1110 Delftia acidovorans SPH-1 nitrate reductase subunit beta YP_001562140.1 1233754 D 398578 CDS YP_001562141.1 160896559 5746666 1235307..1236020 1 NC_010002.1 TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; PFAM: Nitrate reductase delta subunit; KEGG: ajs:Ajs_0438 nitrate reductase molybdenum cofactor assembly chaperone; nitrate reductase molybdenum cofactor assembly chaperone 1236020 5746666 Daci_1111 Delftia acidovorans SPH-1 nitrate reductase molybdenum cofactor assembly chaperone YP_001562141.1 1235307 D 398578 CDS YP_001562142.1 160896560 5746667 1236017..1236754 1 NC_010002.1 KEGG: ajs:Ajs_0439 respiratory nitrate reductase, gamma subunit; TIGRFAM: respiratory nitrate reductase, gamma subunit; PFAM: Nitrate reductase gamma subunit; respiratory nitrate reductase subunit gamma 1236754 5746667 Daci_1112 Delftia acidovorans SPH-1 respiratory nitrate reductase subunit gamma YP_001562142.1 1236017 D 398578 CDS YP_001562143.1 160896561 5746668 1236765..1237667 1 NC_010002.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: ajs:Ajs_0440 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 1237667 5746668 Daci_1113 Delftia acidovorans SPH-1 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001562143.1 1236765 D 398578 CDS YP_001562144.1 160896562 5746669 1237676..1238368 1 NC_010002.1 PFAM: carbonic anhydrase; KEGG: ajs:Ajs_0441 carbonate dehydratase; carbonate dehydratase 1238368 5746669 Daci_1114 Delftia acidovorans SPH-1 carbonate dehydratase YP_001562144.1 1237676 D 398578 CDS YP_001562145.1 160896563 5746670 1238346..1240868 1 NC_010002.1 KEGG: ajs:Ajs_0431 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase large subunit domain protein; ribonucleoside-diphosphate reductase 1240868 5746670 Daci_1115 Delftia acidovorans SPH-1 ribonucleoside-diphosphate reductase YP_001562145.1 1238346 D 398578 CDS YP_001562146.1 160896564 5746671 1240865..1241443 1 NC_010002.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: aav:Aave_0669 hemerythrin HHE cation binding domain protein; hemerythrin HHE cation-binding domain-containing protein 1241443 5746671 Daci_1116 Delftia acidovorans SPH-1 hemerythrin HHE cation-binding domain-containing protein YP_001562146.1 1240865 D 398578 CDS YP_001562147.1 160896565 5746672 1241515..1242609 1 NC_010002.1 TIGRFAM: membrane protein AbrB duplication; PFAM: putative ammonia monooxygenase; KEGG: pol:Bpro_0442 putative ammonia monooxygenase; membrane protein AbrB 1242609 5746672 Daci_1117 Delftia acidovorans SPH-1 membrane protein AbrB YP_001562147.1 1241515 D 398578 CDS YP_001562148.1 160896566 5746673 complement(1242618..1243184) 1 NC_010002.1 KEGG: reh:H16_B1196 transcriptional regulator, GlpP-family; GlpP family transcriptional regulator 1243184 5746673 Daci_1118 Delftia acidovorans SPH-1 GlpP family transcriptional regulator YP_001562148.1 1242618 R 398578 CDS YP_001562149.1 160896567 5746674 complement(1243186..1244736) 1 NC_010002.1 PFAM: FAD linked oxidase domain protein; KEGG: reh:H16_B1197 alkyldihydroxyacetonephosphate synthase; FAD linked oxidase domain-containing protein 1244736 5746674 Daci_1119 Delftia acidovorans SPH-1 FAD linked oxidase domain-containing protein YP_001562149.1 1243186 R 398578 CDS YP_001562150.1 160896568 5746675 complement(1244730..1246412) 1 NC_010002.1 PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_B2081 FAD dependent oxidoreductase; FAD dependent oxidoreductase 1246412 5746675 Daci_1120 Delftia acidovorans SPH-1 FAD dependent oxidoreductase YP_001562150.1 1244730 R 398578 CDS YP_001562151.1 160896569 5746676 complement(1246409..1247950) 1 NC_010002.1 PFAM: carbohydrate kinase FGGY; KEGG: rme:Rmet_5445 carbohydrate kinase, FGGY; carbohydrate kinase FGGY 1247950 5746676 Daci_1121 Delftia acidovorans SPH-1 carbohydrate kinase FGGY YP_001562151.1 1246409 R 398578 CDS YP_001562152.1 160896570 5746677 complement(1247964..1249412) 1 NC_010002.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: reh:H16_B1200 putative MFS transporter; major facilitator transporter 1249412 5746677 Daci_1122 Delftia acidovorans SPH-1 major facilitator transporter YP_001562152.1 1247964 R 398578 CDS YP_001562153.1 160896571 5746678 complement(1249654..1249947) 1 NC_010002.1 KEGG: vei:Veis_0989 hypothetical protein; hypothetical protein 1249947 5746678 Daci_1123 Delftia acidovorans SPH-1 hypothetical protein YP_001562153.1 1249654 R 398578 CDS YP_001562154.1 160896572 5746679 complement(1250153..1251349) 1 NC_010002.1 KEGG: ajs:Ajs_0447 hypothetical protein; hypothetical protein 1251349 5746679 Daci_1124 Delftia acidovorans SPH-1 hypothetical protein YP_001562154.1 1250153 R 398578 CDS YP_001562155.1 160896573 5746680 complement(1251478..1252257) 1 NC_010002.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: aav:Aave_0741 transcriptional regulator, IclR family; IclR family transcriptional regulator 1252257 5746680 Daci_1125 Delftia acidovorans SPH-1 IclR family transcriptional regulator YP_001562155.1 1251478 R 398578 CDS YP_001562156.1 160896574 5746681 1252384..1253406 1 NC_010002.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: aav:Aave_0742 fumarylacetoacetate (FAA) hydrolase; fumarylacetoacetate (FAA) hydrolase 1253406 5746681 Daci_1126 Delftia acidovorans SPH-1 fumarylacetoacetate (FAA) hydrolase YP_001562156.1 1252384 D 398578 CDS YP_001562157.1 160896575 5746682 1253403..1254416 1 NC_010002.1 PFAM: GumN family protein; KEGG: aav:Aave_0743 GumN family protein; GumN family protein 1254416 5746682 Daci_1127 Delftia acidovorans SPH-1 GumN family protein YP_001562157.1 1253403 D 398578 CDS YP_001562158.1 160896576 5746683 1254498..1255472 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: aav:Aave_0744 uncharacterized protein UPF0065; hypothetical protein 1255472 5746683 Daci_1128 Delftia acidovorans SPH-1 hypothetical protein YP_001562158.1 1254498 D 398578 CDS YP_001562159.1 160896577 5746684 complement(1255637..1257397) 1 NC_010002.1 PFAM: ABC-1 domain protein; KEGG: spe:Spro_2799 ABC-1 domain protein; hypothetical protein 1257397 5746684 Daci_1129 Delftia acidovorans SPH-1 hypothetical protein YP_001562159.1 1255637 R 398578 CDS YP_001562160.1 160896578 5746685 complement(1257488..1259671) 1 NC_010002.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: aav:Aave_0767 molybdopterin oxidoreductase; molybdopterin oxidoreductase 1259671 5746685 Daci_1130 Delftia acidovorans SPH-1 molybdopterin oxidoreductase YP_001562160.1 1257488 R 398578 CDS YP_001562161.1 160896579 5746686 1259765..1260922 1 NC_010002.1 PFAM: Extracellular ligand-binding receptor; KEGG: aav:Aave_0768 extracellular ligand-binding receptor; extracellular ligand-binding receptor 1260922 5746686 Daci_1131 Delftia acidovorans SPH-1 extracellular ligand-binding receptor YP_001562161.1 1259765 D 398578 CDS YP_001562162.1 160896580 5746687 1260949..1262157 1 NC_010002.1 KEGG: aav:Aave_0770 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 1262157 5746687 Daci_1132 Delftia acidovorans SPH-1 amidohydrolase YP_001562162.1 1260949 D 398578 CDS YP_001562163.1 160896581 5746688 1262219..1262998 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: kpn:KPN_01887 putative ABC transporter substrate binding protein; ABC transporter-like protein 1262998 5746688 Daci_1133 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001562163.1 1262219 D 398578 CDS YP_001562164.1 160896582 5746689 1263114..1263368 1 NC_010002.1 PFAM: acyl-coA-binding protein ACBP; KEGG: ajs:Ajs_0455 acyl-coA-binding protein, ACBP; acyl-CoA-binding protein 1263368 5746689 Daci_1134 Delftia acidovorans SPH-1 acyl-CoA-binding protein YP_001562164.1 1263114 D 398578 CDS YP_001562165.1 160896583 5746690 complement(1263596..1264618) 1 NC_010002.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: aav:Aave_1085 2OG-Fe(II) oxygenase; 2OG-Fe(II) oxygenase 1264618 5746690 Daci_1135 Delftia acidovorans SPH-1 2OG-Fe(II) oxygenase YP_001562165.1 1263596 R 398578 CDS YP_001562166.1 160896584 5746691 1265189..1266244 1 NC_010002.1 PFAM: NMT1/THI5 like domain protein; KEGG: aav:Aave_1084 Tat (twin-arginine translocation) pathway signal sequence domain protein; NMT1/THI5-like domain-containing protein 1266244 5746691 Daci_1136 Delftia acidovorans SPH-1 NMT1/THI5-like domain-containing protein YP_001562166.1 1265189 D 398578 CDS YP_001562167.1 160896585 5746692 1266255..1266770 1 NC_010002.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: aav:Aave_1083 CMP/dCMP deaminase, zinc-binding; CMP/dCMP deaminase 1266770 5746692 Daci_1137 Delftia acidovorans SPH-1 CMP/dCMP deaminase YP_001562167.1 1266255 D 398578 CDS YP_001562168.1 160896586 5746693 1266826..1267863 1 NC_010002.1 PFAM: NMT1/THI5 like domain protein; KEGG: aav:Aave_1093 twin-arginine translocation pathway signal; NMT1/THI5-like domain-containing protein 1267863 5746693 Daci_1138 Delftia acidovorans SPH-1 NMT1/THI5-like domain-containing protein YP_001562168.1 1266826 D 398578 CDS YP_001562169.1 160896587 5746694 1267932..1268774 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_1092 ABC transporter-related protein; ABC transporter-like protein 1268774 5746694 Daci_1139 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001562169.1 1267932 D 398578 CDS YP_001562170.1 160896588 5746695 1268791..1269558 1 NC_010002.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_1091 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1269558 5746695 Daci_1140 Delftia acidovorans SPH-1 binding-protein-dependent transport system inner membrane protein YP_001562170.1 1268791 D 398578 CDS YP_001562171.1 160896589 5746696 1269573..1270097 1 NC_010002.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: mpt:Mpe_A0774 hypothetical protein; CMP/dCMP deaminase 1270097 5746696 Daci_1141 Delftia acidovorans SPH-1 CMP/dCMP deaminase YP_001562171.1 1269573 D 398578 CDS YP_001562172.1 160896590 5746697 complement(1270122..1271873) 1 NC_010002.1 PFAM: sulfatase; protein of unknown function DUF1705; KEGG: ajs:Ajs_1955 sulfatase; sulfatase 1271873 5746697 Daci_1142 Delftia acidovorans SPH-1 sulfatase YP_001562172.1 1270122 R 398578 CDS YP_001562173.1 160896591 5746698 1272009..1272683 1 NC_010002.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ajs:Ajs_1953 two component transcriptional regulator, winged helix family; two component transcriptional regulator 1272683 5746698 Daci_1143 Delftia acidovorans SPH-1 two component transcriptional regulator YP_001562173.1 1272009 D 398578 CDS YP_001562174.1 160896592 5746699 1272676..1274103 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ajs:Ajs_1952 integral membrane sensor signal transduction histidine kinase; histidine kinase 1274103 5746699 Daci_1144 Delftia acidovorans SPH-1 histidine kinase YP_001562174.1 1272676 D 398578 CDS YP_001562175.1 160896593 5746700 complement(1274055..1275383) 1 NC_010002.1 KEGG: aav:Aave_0774 putative zinc protease protein; putative zinc protease protein 1275383 5746700 Daci_1145 Delftia acidovorans SPH-1 putative zinc protease protein YP_001562175.1 1274055 R 398578 CDS YP_001562176.1 160896594 5746701 1275472..1275957 1 NC_010002.1 KEGG: aav:Aave_3620 hypothetical protein; hypothetical protein 1275957 5746701 Daci_1146 Delftia acidovorans SPH-1 hypothetical protein YP_001562176.1 1275472 D 398578 CDS YP_001562177.1 160896595 5746702 1275983..1277311 1 NC_010002.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: aav:Aave_0777 cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase 1277311 5746702 Daci_1147 Delftia acidovorans SPH-1 cyclopropane-fatty-acyl-phospholipid synthase YP_001562177.1 1275983 D 398578 CDS YP_001562178.1 160896596 5746703 1277345..1277674 1 NC_010002.1 PFAM: Domain of unknown function DUF1840; KEGG: aav:Aave_0778 hypothetical protein; hypothetical protein 1277674 5746703 Daci_1148 Delftia acidovorans SPH-1 hypothetical protein YP_001562178.1 1277345 D 398578 CDS YP_001562179.1 160896597 5746704 complement(1277697..1278779) 1 NC_010002.1 PFAM: aldo/keto reductase; KEGG: sil:SPOA0345 oxidoreductase, aldo/keto reductase family; aldo/keto reductase 1278779 5746704 Daci_1149 Delftia acidovorans SPH-1 aldo/keto reductase YP_001562179.1 1277697 R 398578 CDS YP_001562180.1 160896598 5746705 1278829..1279731 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: asa:ASA_1236 transcriptional regulator, LysR family; LysR family transcriptional regulator 1279731 5746705 Daci_1150 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001562180.1 1278829 D 398578 CDS YP_001562181.1 160896599 5746706 1279796..1280311 1 NC_010002.1 hypothetical protein 1280311 5746706 Daci_1151 Delftia acidovorans SPH-1 hypothetical protein YP_001562181.1 1279796 D 398578 CDS YP_001562182.1 160896600 5746707 complement(1280420..1281409) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: aav:Aave_0780 uncharacterized protein UPF0065; hypothetical protein 1281409 5746707 Daci_1152 Delftia acidovorans SPH-1 hypothetical protein YP_001562182.1 1280420 R 398578 CDS YP_001562183.1 160896601 5746708 complement(1281651..1282898) 1 NC_010002.1 KEGG: ajs:Ajs_0464 putative phenylacetate-CoA ligase; putative phenylacetate-CoA ligase 1282898 5746708 Daci_1153 Delftia acidovorans SPH-1 putative phenylacetate-CoA ligase YP_001562183.1 1281651 R 398578 CDS YP_001562184.1 160896602 5746709 complement(1282952..1283797) 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_0782 ABC transporter-related protein; ABC transporter-like protein 1283797 5746709 Daci_1154 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001562184.1 1282952 R 398578 CDS YP_001562185.1 160896603 5746710 complement(1283959..1285275) 1 NC_010002.1 KEGG: aav:Aave_0783 hypothetical protein; hypothetical protein 1285275 5746710 Daci_1155 Delftia acidovorans SPH-1 hypothetical protein YP_001562185.1 1283959 R 398578 CDS YP_001562186.1 160896604 5746711 complement(1285355..1286419) 1 NC_010002.1 PFAM: inner-membrane translocator; KEGG: aav:Aave_0784 inner-membrane translocator; inner-membrane translocator 1286419 5746711 Daci_1156 Delftia acidovorans SPH-1 inner-membrane translocator YP_001562186.1 1285355 R 398578 CDS YP_001562187.1 160896605 5746712 complement(1286441..1287370) 1 NC_010002.1 PFAM: inner-membrane translocator; KEGG: aav:Aave_0785 inner-membrane translocator; inner-membrane translocator 1287370 5746712 Daci_1157 Delftia acidovorans SPH-1 inner-membrane translocator YP_001562187.1 1286441 R 398578 CDS YP_001562188.1 160896606 5746713 complement(1287528..1288313) 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_0469 ABC transporter related; ABC transporter-like protein 1288313 5746713 Daci_1158 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001562188.1 1287528 R 398578 CDS YP_001562189.1 160896607 5746714 complement(1288328..1290265) 1 NC_010002.1 PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_0470 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 1290265 5746714 Daci_1159 Delftia acidovorans SPH-1 AMP-dependent synthetase/ligase YP_001562189.1 1288328 R 398578 CDS YP_001562190.1 160896608 5746715 1290585..1291313 1 NC_010002.1 PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: ajs:Ajs_0473 putative transcriptional regulator, Crp/Fnr family; Crp/FNR family transcriptional regulator 1291313 5746715 Daci_1160 Delftia acidovorans SPH-1 Crp/FNR family transcriptional regulator YP_001562190.1 1290585 D 398578 CDS YP_001562191.1 160896609 5746716 1291475..1292212 1 NC_010002.1 KEGG: rme:Rmet_1561 hypothetical protein; hypothetical protein 1292212 5746716 Daci_1161 Delftia acidovorans SPH-1 hypothetical protein YP_001562191.1 1291475 D 398578 CDS YP_001562192.1 160896610 5746717 1292209..1293123 1 NC_010002.1 PFAM: Domain of unknown function DUF1814; KEGG: rme:Rmet_1562 hypothetical protein; hypothetical protein 1293123 5746717 Daci_1162 Delftia acidovorans SPH-1 hypothetical protein YP_001562192.1 1292209 D 398578 CDS YP_001562193.1 160896611 5746718 complement(1293142..1294350) 1 NC_010002.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: vei:Veis_2499 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 1294350 5746718 Daci_1163 Delftia acidovorans SPH-1 L-carnitine dehydratase/bile acid-inducible protein F YP_001562193.1 1293142 R 398578 CDS YP_001562194.1 160896612 5746719 complement(1294350..1295348) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: rme:Rmet_5382 uncharacterized protein UPF0065; hypothetical protein 1295348 5746719 Daci_1164 Delftia acidovorans SPH-1 hypothetical protein YP_001562194.1 1294350 R 398578 CDS YP_001562195.1 160896613 5746720 complement(1295363..1296532) 1 NC_010002.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rme:Rmet_1816 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein 1296532 5746720 Daci_1165 Delftia acidovorans SPH-1 acyl-CoA dehydrogenase domain-containing protein YP_001562195.1 1295363 R 398578 CDS YP_001562196.1 160896614 5746721 1296590..1297456 1 NC_010002.1 PFAM: regulatory protein IclR; KEGG: reu:Reut_B3701 regulatory protein, IclR; IclR family transcriptional regulator 1297456 5746721 Daci_1166 Delftia acidovorans SPH-1 IclR family transcriptional regulator YP_001562196.1 1296590 D 398578 CDS YP_001562197.1 160896615 5746722 complement(1297474..1298013) 1 NC_010002.1 hypothetical protein 1298013 5746722 Daci_1167 Delftia acidovorans SPH-1 hypothetical protein YP_001562197.1 1297474 R 398578 CDS YP_001562198.1 160896616 5746723 1298392..1300167 1 NC_010002.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: bur:Bcep18194_A5332 pseudouridine synthase, Rsu; pseudouridine synthase 1300167 5746723 Daci_1168 Delftia acidovorans SPH-1 pseudouridine synthase YP_001562198.1 1298392 D 398578 CDS YP_001562199.1 160896617 5746724 1300297..1300860 1 NC_010002.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: xcb:XC_0556 RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 factor 1300860 5746724 Daci_1169 Delftia acidovorans SPH-1 ECF subfamily RNA polymerase sigma-24 factor YP_001562199.1 1300297 D 398578 CDS YP_001562200.1 160896618 5746725 1300860..1301930 1 NC_010002.1 PFAM: FecR protein; KEGG: xcb:XC_0557 transmembrane sensor; anti-FecI sigma factor FecR 1301930 5746725 Daci_1170 Delftia acidovorans SPH-1 anti-FecI sigma factor FecR YP_001562200.1 1300860 D 398578 CDS YP_001562201.1 160896619 5746726 1302049..1304460 1 NC_010002.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: pfl:PFL_3315 outer membrane ferripyoverdine receptor; TonB-dependent siderophore receptor 1304460 5746726 Daci_1171 Delftia acidovorans SPH-1 TonB-dependent siderophore receptor YP_001562201.1 1302049 D 398578 CDS YP_001562202.1 160896620 5746727 complement(1304485..1305165) 1 NC_010002.1 PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; KEGG: pla:Plav_0377 2OG-Fe(II) oxygenase; 2OG-Fe(II) oxygenase 1305165 5746727 Daci_1172 Delftia acidovorans SPH-1 2OG-Fe(II) oxygenase YP_001562202.1 1304485 R 398578 CDS YP_001562203.1 160896621 5746728 complement(1305298..1307523) 1 NC_010002.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bxe:Bxe_B0794 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 1307523 5746728 Daci_1173 Delftia acidovorans SPH-1 TonB-dependent siderophore receptor YP_001562203.1 1305298 R 398578 CDS YP_001562204.1 160896622 5746729 complement(1307739..1308443) 1 NC_010002.1 TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: sme:SMc01870 probable aquaporin Z (bacterial nodulin-like intrinsic) transmembrane protein; MIP family channel protein 1308443 5746729 Daci_1174 Delftia acidovorans SPH-1 MIP family channel protein YP_001562204.1 1307739 R 398578 CDS YP_001562205.1 160896623 5746730 1308687..1310639 1 NC_010002.1 molecular chaperone; heat shock protein 90 1310639 5746730 Daci_1175 Delftia acidovorans SPH-1 heat shock protein 90 YP_001562205.1 1308687 D 398578 CDS YP_001562206.1 160896624 5746731 1311005..1314613 1 NC_010002.1 TIGRFAM: conserved repeat domain protein; PFAM: protein of unknown function DUF11; KEGG: aav:Aave_4277 conserved repeat domain; hypothetical protein 1314613 5746731 Daci_1176 Delftia acidovorans SPH-1 hypothetical protein YP_001562206.1 1311005 D 398578 CDS YP_001562207.1 160896625 5746732 1314688..1315314 1 NC_010002.1 KEGG: aav:Aave_4282 hypothetical protein; hypothetical protein 1315314 5746732 Daci_1177 Delftia acidovorans SPH-1 hypothetical protein YP_001562207.1 1314688 D 398578 CDS YP_001562208.1 160896626 5746733 1315325..1316080 1 NC_010002.1 KEGG: aav:Aave_4281 hypothetical protein; hypothetical protein 1316080 5746733 Daci_1178 Delftia acidovorans SPH-1 hypothetical protein YP_001562208.1 1315325 D 398578 CDS YP_001562209.1 160896627 5746734 complement(1316100..1316741) 1 NC_010002.1 TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; KEGG: pnu:Pnuc_1190 urease accessory protein UreG; urease accessory protein UreG 1316741 5746734 Daci_1179 Delftia acidovorans SPH-1 urease accessory protein UreG YP_001562209.1 1316100 R 398578 CDS YP_001562210.1 160896628 5746735 complement(1316762..1317478) 1 NC_010002.1 PFAM: Urease accessory protein UreF; KEGG: reu:Reut_A0997 urease accessory protein UreF; urease accessory protein UreF 1317478 5746735 Daci_1180 Delftia acidovorans SPH-1 urease accessory protein UreF YP_001562210.1 1316762 R 398578 CDS YP_001562211.1 160896629 5746736 complement(1317471..1318121) 1 NC_010002.1 PFAM: UreE urease accessory domain protein; KEGG: bte:BTH_I1495 urease accessory protein UreE; UreE urease accessory domain-containing protein 1318121 5746736 Daci_1181 Delftia acidovorans SPH-1 UreE urease accessory domain-containing protein YP_001562211.1 1317471 R 398578 CDS YP_001562212.1 160896630 5746737 complement(1318129..1319832) 1 NC_010002.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha 1319832 ureC 5746737 ureC Delftia acidovorans SPH-1 urease subunit alpha YP_001562212.1 1318129 R 398578 CDS YP_001562213.1 160896631 5746738 complement(1319998..1320315) 1 NC_010002.1 KEGG: bxe:Bxe_A3693 urease, beta subunit; TIGRFAM: urease, beta subunit; PFAM: Urease beta subunit; urease subunit beta 1320315 5746738 Daci_1183 Delftia acidovorans SPH-1 urease subunit beta YP_001562213.1 1319998 R 398578 CDS YP_001562214.1 160896632 5746739 complement(1320331..1320942) 1 NC_010002.1 PFAM: HupE/UreJ protein; KEGG: pna:Pnap_0976 HupE/UreJ protein; HupE/UreJ protein 1320942 5746739 Daci_1184 Delftia acidovorans SPH-1 HupE/UreJ protein YP_001562214.1 1320331 R 398578 CDS YP_001562215.1 160896633 5746740 complement(1320954..1321256) 1 NC_010002.1 KEGG: reh:H16_A1081 UreA amidohydrolase (urease) gamma subunit; TIGRFAM: urease, gamma subunit; PFAM: Urease gamma subunit region; urease subunit gamma 1321256 5746740 Daci_1185 Delftia acidovorans SPH-1 urease subunit gamma YP_001562215.1 1320954 R 398578 CDS YP_001562216.1 160896634 5746741 complement(1321274..1322191) 1 NC_010002.1 PFAM: Urease accessory protein UreD; KEGG: reh:H16_A1080 UreA amidohydrolase (urease) accessory protein UreD; urease accessory protein UreD 1322191 5746741 Daci_1186 Delftia acidovorans SPH-1 urease accessory protein UreD YP_001562216.1 1321274 R 398578 CDS YP_001562217.1 160896635 5746742 complement(1322391..1323656) 1 NC_010002.1 PFAM: major facilitator superfamily MFS_1; KEGG: aav:Aave_2274 major facilitator superfamily MFS_1; major facilitator transporter 1323656 5746742 Daci_1187 Delftia acidovorans SPH-1 major facilitator transporter YP_001562217.1 1322391 R 398578 CDS YP_001562218.1 160896636 5746743 complement(1323703..1324230) 1 NC_010002.1 PFAM: Endoribonuclease L-PSP; KEGG: reh:H16_B2318 ribonuclease; endoribonuclease L-PSP 1324230 5746743 Daci_1188 Delftia acidovorans SPH-1 endoribonuclease L-PSP YP_001562218.1 1323703 R 398578 CDS YP_001562219.1 160896637 5746744 1324360..1324830 1 NC_010002.1 TIGRFAM: redox-sensitive transcriptional activator SoxR; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: reh:H16_B2319 transcriptional regulator, SoxR-family; MerR family transcriptional regulator 1324830 5746744 Daci_1189 Delftia acidovorans SPH-1 MerR family transcriptional regulator YP_001562219.1 1324360 D 398578 CDS YP_001562220.1 160896638 5746745 complement(1324854..1326023) 1 NC_010002.1 PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_2346 major facilitator superfamily MFS_1; major facilitator transporter 1326023 5746745 Daci_1190 Delftia acidovorans SPH-1 major facilitator transporter YP_001562220.1 1324854 R 398578 CDS YP_001562221.1 160896639 5746746 1326344..1326823 1 NC_010002.1 KEGG: ajs:Ajs_2291 hypothetical protein; hypothetical protein 1326823 5746746 Daci_1191 Delftia acidovorans SPH-1 hypothetical protein YP_001562221.1 1326344 D 398578 CDS YP_001562222.1 160896640 5746747 complement(1326875..1327825) 1 NC_010002.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: ppd:Ppro_1341 response regulator receiver modulated diguanylate cyclase; response regulator receiver modulated diguanylate cyclase 1327825 5746747 Daci_1192 Delftia acidovorans SPH-1 response regulator receiver modulated diguanylate cyclase YP_001562222.1 1326875 R 398578 CDS YP_001562223.1 160896641 5746748 complement(1327942..1329006) 1 NC_010002.1 catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages; serine/threonine protein kinase 1329006 5746748 Daci_1193 Delftia acidovorans SPH-1 serine/threonine protein kinase YP_001562223.1 1327942 R 398578 CDS YP_001562224.1 160896642 5746749 1329071..1329808 1 NC_010002.1 KEGG: azo:azo0068 hypothetical protein; hypothetical protein 1329808 5746749 Daci_1194 Delftia acidovorans SPH-1 hypothetical protein YP_001562224.1 1329071 D 398578 CDS YP_001562225.1 160896643 5746750 complement(1329809..1330225) 1 NC_010002.1 PFAM: OsmC family protein; KEGG: aav:Aave_4272 OsmC family protein; OsmC family protein 1330225 5746750 Daci_1195 Delftia acidovorans SPH-1 OsmC family protein YP_001562225.1 1329809 R 398578 CDS YP_001562226.1 160896644 5746751 complement(1330290..1330757) 1 NC_010002.1 PFAM: regulatory protein MarR; KEGG: ajs:Ajs_0483 transcriptional regulator, MarR family; MarR family transcriptional regulator 1330757 5746751 Daci_1196 Delftia acidovorans SPH-1 MarR family transcriptional regulator YP_001562226.1 1330290 R 398578 CDS YP_001562227.1 160896645 5746752 complement(1330851..1331666) 1 NC_010002.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pae:PA2841 probable enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 1331666 5746752 Daci_1197 Delftia acidovorans SPH-1 enoyl-CoA hydratase/isomerase YP_001562227.1 1330851 R 398578 CDS YP_001562228.1 160896646 5746753 complement(1331765..1332613) 1 NC_010002.1 converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; 3-hydroxybutyryl-CoA dehydrogenase 1332613 5746753 Daci_1198 Delftia acidovorans SPH-1 3-hydroxybutyryl-CoA dehydrogenase YP_001562228.1 1331765 R 398578 CDS YP_001562229.1 160896647 5746754 1332770..1334362 1 NC_010002.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: ajs:Ajs_3717 glucose-methanol-choline oxidoreductase; glucose-methanol-choline oxidoreductase 1334362 5746754 Daci_1199 Delftia acidovorans SPH-1 glucose-methanol-choline oxidoreductase YP_001562229.1 1332770 D 398578 CDS YP_001562230.1 160896648 5746755 complement(1334359..1335627) 1 NC_010002.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: aav:Aave_4247 diguanylate cyclase; diguanylate cyclase 1335627 5746755 Daci_1200 Delftia acidovorans SPH-1 diguanylate cyclase YP_001562230.1 1334359 R 398578 CDS YP_001562231.1 160896649 5746756 complement(1335690..1337186) 1 NC_010002.1 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile; AMP nucleosidase 1337186 5746756 Daci_1201 Delftia acidovorans SPH-1 AMP nucleosidase YP_001562231.1 1335690 R 398578 CDS YP_001562232.1 160896650 5746757 complement(1337190..1339268) 1 NC_010002.1 KEGG: ajs:Ajs_3708 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 1339268 5746757 Daci_1202 Delftia acidovorans SPH-1 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_001562232.1 1337190 R 398578 CDS YP_001562233.1 160896651 5746758 complement(1339441..1340031) 1 NC_010002.1 PFAM: protein of unknown function DUF336; KEGG: pol:Bpro_4102 protein of unknown function DUF336; hypothetical protein 1340031 5746758 Daci_1203 Delftia acidovorans SPH-1 hypothetical protein YP_001562233.1 1339441 R 398578 CDS YP_001562234.1 160896652 5746759 complement(1340105..1340746) 1 NC_010002.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: pol:Bpro_4101 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 1340746 5746759 Daci_1204 Delftia acidovorans SPH-1 two component LuxR family transcriptional regulator YP_001562234.1 1340105 R 398578 CDS YP_001562235.1 160896653 5746760 complement(1340743..1342389) 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pol:Bpro_4100 periplasmic sensor signal transduction histidine kinase; histidine kinase 1342389 5746760 Daci_1205 Delftia acidovorans SPH-1 histidine kinase YP_001562235.1 1340743 R 398578 CDS YP_001562236.1 160896654 5746761 1342430..1343380 1 NC_010002.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: ajs:Ajs_3707 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter 1343380 5746761 Daci_1206 Delftia acidovorans SPH-1 cation diffusion facilitator family transporter YP_001562236.1 1342430 D 398578 CDS YP_001562237.1 160896655 5746762 1343377..1343847 1 NC_010002.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase 1343847 5746762 Daci_1207 Delftia acidovorans SPH-1 D-tyrosyl-tRNA(Tyr) deacylase YP_001562237.1 1343377 D 398578 CDS YP_001562238.1 160896656 5746763 1343970..1345745 1 NC_010002.1 KEGG: rme:Rmet_4890 peptidase M20A, peptidase V; TIGRFAM: dipeptidase,; PFAM: peptidase M20; peptidase dimerisation domain protein; hypothetical protein 1345745 5746763 Daci_1208 Delftia acidovorans SPH-1 hypothetical protein YP_001562238.1 1343970 D 398578 CDS YP_001562239.1 160896657 5746764 1345861..1346874 1 NC_010002.1 TIGRFAM: CRISPR-associated protein Cas1; KEGG: ajs:Ajs_0489 CRISPR-associated protein Cas1; CRISPR-associated Cas1 family protein 1346874 5746764 Daci_1209 Delftia acidovorans SPH-1 CRISPR-associated Cas1 family protein YP_001562239.1 1345861 D 398578 CDS YP_001562240.1 160896658 5746766 complement(1350361..1350672) 1 NC_010002.1 TIGRFAM: addiction module antidote protein, HigA family; KEGG: dno:DNO_0272 virulence-associated protein VapI; XRE family plasmid maintenance system antidote protein 1350672 5746766 Daci_1211 Delftia acidovorans SPH-1 XRE family plasmid maintenance system antidote protein YP_001562240.1 1350361 R 398578 CDS YP_001562241.1 160896659 5746767 complement(1350751..1351032) 1 NC_010002.1 PFAM: plasmid maintenance system killer; KEGG: ppf:Pput_4191 plasmid maintenance system killer; plasmid maintenance system killer protein 1351032 5746767 Daci_1212 Delftia acidovorans SPH-1 plasmid maintenance system killer protein YP_001562241.1 1350751 R 398578 CDS YP_001562242.1 160896660 5746768 1351203..1352600 1 NC_010002.1 TIGRFAM: CRISPR-associated protein, Csy1 family; PFAM: CRISPR-associated protein Csy1; KEGG: vei:Veis_1458 CRISPR-associated protein, Csy1 family; CRISPR-associated Csy1 family protein 1352600 5746768 Daci_1213 Delftia acidovorans SPH-1 CRISPR-associated Csy1 family protein YP_001562242.1 1351203 D 398578 CDS YP_001562243.1 160896661 5746769 1352597..1353685 1 NC_010002.1 TIGRFAM: CRISPR-associated protein, Csy2 family; PFAM: CRISPR-associated protein Csy2; KEGG: ajs:Ajs_0486 CRISPR-associated protein, Csy2 family; CRISPR-associated Csy2 family protein 1353685 5746769 Daci_1214 Delftia acidovorans SPH-1 CRISPR-associated Csy2 family protein YP_001562243.1 1352597 D 398578 CDS YP_001562244.1 160896662 5746770 1353740..1354768 1 NC_010002.1 TIGRFAM: CRISPR-associated protein, Csy3 family; PFAM: CRISPR-associated protein Csy3; KEGG: vei:Veis_1456 CRISPR-associated protein, Csy3 family; CRISPR-associated Csy3 family protein 1354768 5746770 Daci_1215 Delftia acidovorans SPH-1 CRISPR-associated Csy3 family protein YP_001562244.1 1353740 D 398578 CDS YP_001562245.1 160896663 5746771 1354768..1355340 1 NC_010002.1 TIGRFAM: CRISPR-associated protein, Csy4 family; PFAM: CRISPR-associated protein Csy4; KEGG: ajs:Ajs_0484 CRISPR-associated protein, Csy4 family; CRISPR-associated Csy4 family protein 1355340 5746771 Daci_1216 Delftia acidovorans SPH-1 CRISPR-associated Csy4 family protein YP_001562245.1 1354768 D 398578 CDS YP_001562246.1 160896664 5746772 complement(1359174..1359560) 1 NC_010002.1 hypothetical protein 1359560 5746772 Daci_1217 Delftia acidovorans SPH-1 hypothetical protein YP_001562246.1 1359174 R 398578 CDS YP_001562247.1 160896665 5746773 1359996..1360241 1 NC_010002.1 hypothetical protein 1360241 5746773 Daci_1218 Delftia acidovorans SPH-1 hypothetical protein YP_001562247.1 1359996 D 398578 CDS YP_001562248.1 160896666 5746774 complement(1360454..1361212) 1 NC_010002.1 PFAM: protein of unknown function DUF81; KEGG: ajs:Ajs_3704 protein of unknown function DUF81; hypothetical protein 1361212 5746774 Daci_1219 Delftia acidovorans SPH-1 hypothetical protein YP_001562248.1 1360454 R 398578 CDS YP_001562249.1 160896667 5746775 complement(1361403..1362392) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: vei:Veis_0434 transcriptional regulator, LysR family; LysR family transcriptional regulator 1362392 5746775 Daci_1220 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001562249.1 1361403 R 398578 CDS YP_001562250.1 160896668 5746776 1362466..1363413 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: vei:Veis_0435 uncharacterized protein UPF0065; hypothetical protein 1363413 5746776 Daci_1221 Delftia acidovorans SPH-1 hypothetical protein YP_001562250.1 1362466 D 398578 CDS YP_001562251.1 160896669 5746777 1363436..1364692 1 NC_010002.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: vei:Veis_0218 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 1364692 5746777 Daci_1222 Delftia acidovorans SPH-1 L-carnitine dehydratase/bile acid-inducible protein F YP_001562251.1 1363436 D 398578 CDS YP_001562252.1 160896670 5746778 1364734..1365720 1 NC_010002.1 TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pna:Pnap_1210 alcohol dehydrogenase GroES domain protein; quinone oxidoreductase 1365720 5746778 Daci_1223 Delftia acidovorans SPH-1 quinone oxidoreductase YP_001562252.1 1364734 D 398578 CDS YP_001562253.1 160896671 5746779 complement(1365735..1366193) 1 NC_010002.1 PFAM: protein of unknown function UPF0054; KEGG: ajs:Ajs_3702 protein of unknown function UPF0054; hypothetical protein 1366193 5746779 Daci_1224 Delftia acidovorans SPH-1 hypothetical protein YP_001562253.1 1365735 R 398578 CDS YP_001562254.1 160896672 5746780 complement(1366258..1367229) 1 NC_010002.1 PFAM: PhoH family protein; KEGG: aav:Aave_4241 PhoH family protein; PhoH family protein 1367229 5746780 Daci_1225 Delftia acidovorans SPH-1 PhoH family protein YP_001562254.1 1366258 R 398578 CDS YP_001562255.1 160896673 5746781 1367355..1367927 1 NC_010002.1 KEGG: ajs:Ajs_3700 Holliday junction DNA helicase RuvA; TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: RuvA domain protein; DNA recombination protein RuvA domain I; SMART: Helix-hairpin-helix DNA-binding class 1; Holliday junction DNA helicase RuvA 1367927 5746781 Daci_1226 Delftia acidovorans SPH-1 Holliday junction DNA helicase RuvA YP_001562255.1 1367355 D 398578 CDS YP_001562256.1 160896674 5746782 1367935..1369020 1 NC_010002.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 1369020 ruvB 5746782 ruvB Delftia acidovorans SPH-1 Holliday junction DNA helicase RuvB YP_001562256.1 1367935 D 398578 CDS YP_001562257.1 160896675 5746783 complement(1369028..1369744) 1 NC_010002.1 PFAM: MgtC/SapB transporter; KEGG: aav:Aave_0651 MgtC/SapB transporter; MgtC/SapB transporter 1369744 5746783 Daci_1228 Delftia acidovorans SPH-1 MgtC/SapB transporter YP_001562257.1 1369028 R 398578 CDS YP_001562258.1 160896676 5746784 complement(1369785..1372544) 1 NC_010002.1 P-type ATPase involved in magnesium influx; magnesium-transporting ATPase MgtA 1372544 5746784 Daci_1229 Delftia acidovorans SPH-1 magnesium-transporting ATPase MgtA YP_001562258.1 1369785 R 398578 CDS YP_001562259.1 160896677 5746785 complement(1372563..1372775) 1 NC_010002.1 hypothetical protein 1372775 5746785 Daci_1230 Delftia acidovorans SPH-1 hypothetical protein YP_001562259.1 1372563 R 398578 CDS YP_001562260.1 160896678 5746786 complement(1373186..1373422) 1 NC_010002.1 hypothetical protein 1373422 5746786 Daci_1231 Delftia acidovorans SPH-1 hypothetical protein YP_001562260.1 1373186 R 398578 CDS YP_001562261.1 160896679 5746787 complement(1373674..1375554) 1 NC_010002.1 PFAM: fatty acid hydroxylase; YhhN family protein; KEGG: ajs:Ajs_3693 YhhN family protein; hypothetical protein 1375554 5746787 Daci_1232 Delftia acidovorans SPH-1 hypothetical protein YP_001562261.1 1373674 R 398578 CDS YP_001562262.1 160896680 5746788 1375659..1376798 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: vei:Veis_2519 uncharacterized protein UPF0065; hypothetical protein 1376798 5746788 Daci_1233 Delftia acidovorans SPH-1 hypothetical protein YP_001562262.1 1375659 D 398578 CDS YP_001562263.1 160896681 5746789 1376974..1378140 1 NC_010002.1 KEGG: rme:Rmet_5702 hypothetical protein; hypothetical protein 1378140 5746789 Daci_1234 Delftia acidovorans SPH-1 hypothetical protein YP_001562263.1 1376974 D 398578 CDS YP_001562264.1 160896682 5746790 1378131..1379270 1 NC_010002.1 KEGG: rme:Rmet_5701 hypothetical protein; hypothetical protein 1379270 5746790 Daci_1235 Delftia acidovorans SPH-1 hypothetical protein YP_001562264.1 1378131 D 398578 CDS YP_001562265.1 160896683 5746791 1379418..1380080 1 NC_010002.1 KEGG: rme:Rmet_5700 hypothetical protein; hypothetical protein 1380080 5746791 Daci_1236 Delftia acidovorans SPH-1 hypothetical protein YP_001562265.1 1379418 D 398578 CDS YP_001562266.1 160896684 5746792 1380107..1381561 1 NC_010002.1 KEGG: rme:Rmet_5699 hypothetical protein; hypothetical protein 1381561 5746792 Daci_1237 Delftia acidovorans SPH-1 hypothetical protein YP_001562266.1 1380107 D 398578 CDS YP_001562267.1 160896685 5746793 complement(1381612..1382253) 1 NC_010002.1 PFAM: Phosphoglycerate mutase; KEGG: ajs:Ajs_0491 phosphoglycerate mutase; phosphoglycerate mutase 1382253 5746793 Daci_1238 Delftia acidovorans SPH-1 phosphoglycerate mutase YP_001562267.1 1381612 R 398578 CDS YP_001562268.1 160896686 5746794 complement(1382400..1382885) 1 NC_010002.1 KEGG: ajs:Ajs_0492 hypothetical protein; hypothetical protein 1382885 5746794 Daci_1239 Delftia acidovorans SPH-1 hypothetical protein YP_001562268.1 1382400 R 398578 CDS YP_001562269.1 160896687 5746795 1383241..1384833 1 NC_010002.1 PFAM: extracellular solute-binding protein family 5; KEGG: sit:TM1040_3144 extracellular solute-binding protein, family 5; extracellular solute-binding protein 1384833 5746795 Daci_1240 Delftia acidovorans SPH-1 extracellular solute-binding protein YP_001562269.1 1383241 D 398578 CDS YP_001562270.1 160896688 5746796 1384840..1385805 1 NC_010002.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sit:TM1040_3142 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1385805 5746796 Daci_1241 Delftia acidovorans SPH-1 binding-protein-dependent transport system inner membrane protein YP_001562270.1 1384840 D 398578 CDS YP_001562271.1 160896689 5746797 1385802..1386740 1 NC_010002.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rde:RD1_2223 peptide ABC transporter, permease protein, putative; binding-protein-dependent transport system inner membrane protein 1386740 5746797 Daci_1242 Delftia acidovorans SPH-1 binding-protein-dependent transport system inner membrane protein YP_001562271.1 1385802 D 398578 CDS YP_001562272.1 160896690 5746798 1386737..1388464 1 NC_010002.1 PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: bbr:BB4911 probable ABC transporter, ATP-binding protein; ABC transporter-like protein 1388464 5746798 Daci_1243 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001562272.1 1386737 D 398578 CDS YP_001562273.1 160896691 5746799 complement(1388492..1388815) 1 NC_010002.1 KEGG: pna:Pnap_0085 putative transcriptional regulator; putative transcriptional regulator 1388815 5746799 Daci_1244 Delftia acidovorans SPH-1 putative transcriptional regulator YP_001562273.1 1388492 R 398578 CDS YP_001562274.1 160896692 5746800 complement(1388812..1389171) 1 NC_010002.1 TIGRFAM: addiction module killer protein; PFAM: protein of unknown function DUF891; KEGG: pna:Pnap_0084 protein of unknown function DUF891; addiction module killer protein 1389171 5746800 Daci_1245 Delftia acidovorans SPH-1 addiction module killer protein YP_001562274.1 1388812 R 398578 CDS YP_001562275.1 160896693 5746801 complement(1389318..1390013) 1 NC_010002.1 KEGG: aav:Aave_4232 hypothetical protein; hypothetical protein 1390013 5746801 Daci_1246 Delftia acidovorans SPH-1 hypothetical protein YP_001562275.1 1389318 R 398578 CDS YP_001562276.1 160896694 5746802 complement(1390091..1391032) 1 NC_010002.1 TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs; C32 tRNA thiolase 1391032 5746802 Daci_1247 Delftia acidovorans SPH-1 C32 tRNA thiolase YP_001562276.1 1390091 R 398578 CDS YP_001562277.1 160896695 5746803 complement(1391045..1391890) 1 NC_010002.1 PFAM: fatty acid hydroxylase; KEGG: ana:all2658 hypothetical protein; fatty acid hydroxylase 1391890 5746803 Daci_1248 Delftia acidovorans SPH-1 fatty acid hydroxylase YP_001562277.1 1391045 R 398578 CDS YP_001562278.1 160896696 5746804 complement(1392031..1392402) 1 NC_010002.1 PFAM: dihydroneopterin aldolase; KEGG: ajs:Ajs_0495 dihydroneopterin aldolase; dihydroneopterin aldolase 1392402 5746804 Daci_1249 Delftia acidovorans SPH-1 dihydroneopterin aldolase YP_001562278.1 1392031 R 398578 CDS YP_001562279.1 160896697 5746805 complement(1392445..1393230) 1 NC_010002.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ajs:Ajs_0496 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1393230 5746805 Daci_1250 Delftia acidovorans SPH-1 short-chain dehydrogenase/reductase SDR YP_001562279.1 1392445 R 398578 CDS YP_001562280.1 160896698 5746806 1393347..1394360 1 NC_010002.1 PFAM: protein of unknown function DUF185; KEGG: ajs:Ajs_0497 protein of unknown function DUF185; hypothetical protein 1394360 5746806 Daci_1251 Delftia acidovorans SPH-1 hypothetical protein YP_001562280.1 1393347 D 398578 CDS YP_001562281.1 160896699 5746807 complement(1394387..1395400) 1 NC_010002.1 KEGG: azo:azo3831 conserved hypothetical secreted protein; hypothetical protein 1395400 5746807 Daci_1252 Delftia acidovorans SPH-1 hypothetical protein YP_001562281.1 1394387 R 398578 CDS YP_001562282.1 160896700 5746808 1395429..1395623 1 NC_010002.1 KEGG: ajs:Ajs_0499 hypothetical protein; hypothetical protein 1395623 5746808 Daci_1253 Delftia acidovorans SPH-1 hypothetical protein YP_001562282.1 1395429 D 398578 CDS YP_001562283.1 160896701 5746809 1395698..1396132 1 NC_010002.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: ajs:Ajs_0504 thioredoxin; thioredoxin 1396132 5746809 Daci_1254 Delftia acidovorans SPH-1 thioredoxin YP_001562283.1 1395698 D 398578 CDS YP_001562284.1 160896702 5746810 complement(1396176..1396859) 1 NC_010002.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mms:mma_2821 two-components system response regulator; two component transcriptional regulator 1396859 5746810 Daci_1255 Delftia acidovorans SPH-1 two component transcriptional regulator YP_001562284.1 1396176 R 398578 CDS YP_001562285.1 160896703 5746811 1396928..1398886 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Diverse 7TM receptor extracellular region 2; KEGG: bur:Bcep18194_B1562 periplasmic sensor signal transduction histidine kinase; histidine kinase 1398886 5746811 Daci_1256 Delftia acidovorans SPH-1 histidine kinase YP_001562285.1 1396928 D 398578 CDS YP_001562286.1 160896704 5746812 complement(1398912..1400165) 1 NC_010002.1 PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; KEGG: ajs:Ajs_0505 metal dependent phosphohydrolase; polynucleotide adenylyltransferase/metal dependent phosphohydrolase 1400165 5746812 Daci_1257 Delftia acidovorans SPH-1 polynucleotide adenylyltransferase/metal dependent phosphohydrolase YP_001562286.1 1398912 R 398578 CDS YP_001562287.1 160896705 5746813 1400260..1401801 1 NC_010002.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: eca:ECA1988 putative peptidase; peptidase dimerisation domain-containing protein 1401801 5746813 Daci_1258 Delftia acidovorans SPH-1 peptidase dimerisation domain-containing protein YP_001562287.1 1400260 D 398578 CDS YP_001562288.1 160896706 5746814 complement(1401834..1402523) 1 NC_010002.1 PFAM: Glutathione S-transferase domain; KEGG: ajs:Ajs_0507 glutathione S-transferase, N-terminal domain; glutathione S-transferase domain-containing protein 1402523 5746814 Daci_1259 Delftia acidovorans SPH-1 glutathione S-transferase domain-containing protein YP_001562288.1 1401834 R 398578 CDS YP_001562289.1 160896707 5746815 1402612..1403370 1 NC_010002.1 TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: pna:Pnap_0636 ExsB protein; exsB protein 1403370 5746815 Daci_1260 Delftia acidovorans SPH-1 exsB protein YP_001562289.1 1402612 D 398578 CDS YP_001562290.1 160896708 5746816 complement(1403512..1404084) 1 NC_010002.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: vei:Veis_1472 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase 1404084 5746816 Daci_1261 Delftia acidovorans SPH-1 5-formyltetrahydrofolate cyclo-ligase YP_001562290.1 1403512 R 398578 CDS YP_001562291.1 160896709 5746817 1404100..1406079 1 NC_010002.1 PFAM: Lytic transglycosylase catalytic; KEGG: aav:Aave_4203 lytic transglycosylase, catalytic; lytic transglycosylase catalytic subunit 1406079 5746817 Daci_1262 Delftia acidovorans SPH-1 lytic transglycosylase catalytic subunit YP_001562291.1 1404100 D 398578 CDS YP_001562292.1 160896710 5746818 1406187..1406750 1 NC_010002.1 KEGG: hch:HCH_06720 hypothetical protein; hypothetical protein 1406750 5746818 Daci_1263 Delftia acidovorans SPH-1 hypothetical protein YP_001562292.1 1406187 D 398578 CDS YP_001562293.1 160896711 5746819 complement(1406899..1407858) 1 NC_010002.1 PFAM: beta-lactamase domain protein; KEGG: aav:Aave_4202 beta-lactamase domain protein; beta-lactamase domain-containing protein 1407858 5746819 Daci_1264 Delftia acidovorans SPH-1 beta-lactamase domain-containing protein YP_001562293.1 1406899 R 398578 CDS YP_001562294.1 160896712 5746820 complement(1407945..1409645) 1 NC_010002.1 PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_0516 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 1409645 5746820 Daci_1265 Delftia acidovorans SPH-1 AMP-dependent synthetase/ligase YP_001562294.1 1407945 R 398578 CDS YP_001562295.1 160896713 5746821 1409816..1410814 1 NC_010002.1 KEGG: ajs:Ajs_0517 PGAP1 family protein; PGAP1 family protein 1410814 5746821 Daci_1266 Delftia acidovorans SPH-1 PGAP1 family protein YP_001562295.1 1409816 D 398578 CDS YP_001562296.1 160896714 5746822 complement(1410763..1411653) 1 NC_010002.1 phenylalanine 4-hydroxylase; phenylalanine 4-hydroxylase; catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin; phenylalanine 4-monooxygenase 1411653 phhA 5746822 phhA Delftia acidovorans SPH-1 phenylalanine 4-monooxygenase YP_001562296.1 1410763 R 398578 CDS YP_001562297.1 160896715 5746823 complement(1411718..1412800) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0519 uncharacterized protein UPF0065; hypothetical protein 1412800 5746823 Daci_1268 Delftia acidovorans SPH-1 hypothetical protein YP_001562297.1 1411718 R 398578 CDS YP_001562298.1 160896716 5746824 1413176..1413658 1 NC_010002.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: aav:Aave_4188 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 1413658 5746824 Daci_1269 Delftia acidovorans SPH-1 AsnC family transcriptional regulator YP_001562298.1 1413176 D 398578 CDS YP_001562299.1 160896717 5746825 1413850..1414521 1 NC_010002.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ajs:Ajs_0522 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1414521 5746825 Daci_1270 Delftia acidovorans SPH-1 N-acetyltransferase GCN5 YP_001562299.1 1413850 D 398578 CDS YP_001562300.1 160896718 5746826 1414585..1415508 1 NC_010002.1 PFAM: CBS domain containing protein; transporter-associated region; KEGG: pol:Bpro_4209 CBS domain; hypothetical protein 1415508 5746826 Daci_1271 Delftia acidovorans SPH-1 hypothetical protein YP_001562300.1 1414585 D 398578 CDS YP_001562301.1 160896719 5746827 1415583..1417235 1 NC_010002.1 TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: ajs:Ajs_0524 apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase 1417235 5746827 Daci_1272 Delftia acidovorans SPH-1 apolipoprotein N-acyltransferase YP_001562301.1 1415583 D 398578 CDS YP_001562302.1 160896720 5746828 1417414..1417938 1 NC_010002.1 catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; 3-hydroxydecanoyl-ACP dehydratase 1417938 5746828 Daci_1273 Delftia acidovorans SPH-1 3-hydroxydecanoyl-ACP dehydratase YP_001562302.1 1417414 D 398578 CDS YP_001562303.1 160896721 5746829 1417935..1419158 1 NC_010002.1 PFAM: Beta-ketoacyl synthase; KEGG: ajs:Ajs_0526 beta-ketoacyl synthase; beta-ketoacyl synthase 1419158 5746829 Daci_1274 Delftia acidovorans SPH-1 beta-ketoacyl synthase YP_001562303.1 1417935 D 398578 CDS YP_001562304.1 160896722 5746830 1419323..1420393 1 NC_010002.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: ajs:Ajs_0537 dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase 1420393 5746830 Daci_1275 Delftia acidovorans SPH-1 dTDP-glucose 4,6-dehydratase YP_001562304.1 1419323 D 398578 CDS YP_001562305.1 160896723 5746831 1420390..1421292 1 NC_010002.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: pol:Bpro_4021 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 1421292 5746831 Daci_1276 Delftia acidovorans SPH-1 dTDP-4-dehydrorhamnose reductase YP_001562305.1 1420390 D 398578 CDS YP_001562306.1 160896724 5746832 1421334..1422224 1 NC_010002.1 TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: pol:Bpro_4018 glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylyltransferase 1422224 5746832 Daci_1277 Delftia acidovorans SPH-1 glucose-1-phosphate thymidylyltransferase YP_001562306.1 1421334 D 398578 CDS YP_001562307.1 160896725 5746833 1422221..1422769 1 NC_010002.1 KEGG: ajs:Ajs_0540 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase 1422769 5746833 Daci_1278 Delftia acidovorans SPH-1 dTDP-4-dehydrorhamnose 3,5-epimerase YP_001562307.1 1422221 D 398578 CDS YP_001562308.1 160896726 5746834 complement(1422776..1423657) 1 NC_010002.1 TIGRFAM: aminoethylphosphonate catabolism associated LysR family transcriptional regulator; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reu:Reut_B5518 regulatory protein, LysR:LysR, substrate-binding; LysR family transcriptional regulator 1423657 5746834 Daci_1279 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001562308.1 1422776 R 398578 CDS YP_001562309.1 160896727 5746835 1423871..1425322 1 NC_010002.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: pol:Bpro_3578 permease for cytosine/purines, uracil, thiamine, allantoin; cytosine/purines uracil thiamine allantoin permease 1425322 5746835 Daci_1280 Delftia acidovorans SPH-1 cytosine/purines uracil thiamine allantoin permease YP_001562309.1 1423871 D 398578 CDS YP_001562310.1 160896728 5746836 1425333..1426082 1 NC_010002.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pol:Bpro_1419 transcriptional regulator, GntR family; GntR family transcriptional regulator 1426082 5746836 Daci_1281 Delftia acidovorans SPH-1 GntR family transcriptional regulator YP_001562310.1 1425333 D 398578 CDS YP_001562311.1 160896729 5746837 1426281..1427324 1 NC_010002.1 TIGRFAM: 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component; PFAM: extracellular solute-binding protein family 1; KEGG: reh:H16_B0111 ABC-type transporter, periplasmic component: BIT family; 2-aminoethylphosphonate ABC transporter substrate-binding protein 1427324 5746837 Daci_1282 Delftia acidovorans SPH-1 2-aminoethylphosphonate ABC transporter substrate-binding protein YP_001562311.1 1426281 D 398578 CDS YP_001562312.1 160896730 5746838 1427339..1428412 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: smd:Smed_4878 ABC transporter related; ABC transporter-like protein 1428412 5746838 Daci_1283 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001562312.1 1427339 D 398578 CDS YP_001562313.1 160896731 5746839 1428409..1430187 1 NC_010002.1 TIGRFAM: 2-aminoethylphosphonate ABC transport system, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hch:HCH_03086 ABC-type Fe3+ transport system, permease component; 2-aminoethylphosphonate ABC transporter permease 1430187 5746839 Daci_1284 Delftia acidovorans SPH-1 2-aminoethylphosphonate ABC transporter permease YP_001562313.1 1428409 D 398578 CDS YP_001562314.1 160896732 5746840 1430220..1431335 1 NC_010002.1 TIGRFAM: FAD dependent oxidoreductase TIGR03364; PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_C6735 FAD dependent oxidoreductase; FAD dependent oxidoreductase 1431335 5746840 Daci_1285 Delftia acidovorans SPH-1 FAD dependent oxidoreductase YP_001562314.1 1430220 D 398578 CDS YP_001562315.1 160896733 5746841 complement(1431351..1432523) 1 NC_010002.1 KEGG: aba:Acid345_4150 hypothetical protein; hypothetical protein 1432523 5746841 Daci_1286 Delftia acidovorans SPH-1 hypothetical protein YP_001562315.1 1431351 R 398578 CDS YP_001562316.1 160896734 5746842 complement(1432603..1433718) 1 NC_010002.1 TIGRFAM: DNA binding domain protein, excisionase family; KEGG: tfu:Tfu_2818 hypothetical protein; DNA-binding domain-containing protein 1433718 5746842 Daci_1287 Delftia acidovorans SPH-1 DNA-binding domain-containing protein YP_001562316.1 1432603 R 398578 CDS YP_001562317.1 160896735 5746843 1434077..1435015 1 NC_010002.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 1435015 glyQ 5746843 glyQ Delftia acidovorans SPH-1 glycyl-tRNA synthetase subunit alpha YP_001562317.1 1434077 D 398578 CDS YP_001562318.1 160896736 5746844 1435050..1437164 1 NC_010002.1 KEGG: aav:Aave_4177 glycine--tRNA ligase; TIGRFAM: glycyl-tRNA synthetase, beta subunit; glycyl-tRNA synthetase subunit beta 1437164 5746844 Daci_1289 Delftia acidovorans SPH-1 glycyl-tRNA synthetase subunit beta YP_001562318.1 1435050 D 398578 CDS YP_001562319.1 160896737 5746845 1437220..1437789 1 NC_010002.1 TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: vei:Veis_2164 histidinol-phosphate phosphatase family protein; histidinol-phosphate phosphatase family protein 1437789 5746845 Daci_1290 Delftia acidovorans SPH-1 histidinol-phosphate phosphatase family protein YP_001562319.1 1437220 D 398578 CDS YP_001562320.1 160896738 5746846 1437940..1438680 1 NC_010002.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: aav:Aave_4174 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 1438680 5746846 Daci_1291 Delftia acidovorans SPH-1 phospholipid/glycerol acyltransferase YP_001562320.1 1437940 D 398578 CDS YP_001562321.1 160896739 5746847 1438697..1439623 1 NC_010002.1 PFAM: protein of unknown function DUF45; KEGG: aav:Aave_4173 protein of unknown function DUF45; hypothetical protein 1439623 5746847 Daci_1292 Delftia acidovorans SPH-1 hypothetical protein YP_001562321.1 1438697 D 398578 CDS YP_001562322.1 160896740 5746848 1439714..1440154 1 NC_010002.1 SMART: Rhodanese domain protein; KEGG: vei:Veis_2167 rhodanese domain protein; rhodanese domain-containing protein 1440154 5746848 Daci_1293 Delftia acidovorans SPH-1 rhodanese domain-containing protein YP_001562322.1 1439714 D 398578 CDS YP_001562323.1 160896741 5746849 complement(1440177..1441112) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reu:Reut_A2109 regulatory protein, LysR:LysR, substrate-binding; LysR family transcriptional regulator 1441112 5746849 Daci_1294 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001562323.1 1440177 R 398578 CDS YP_001562324.1 160896742 5746850 1441218..1442192 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: pol:Bpro_2118 uncharacterized protein UPF0065; hypothetical protein 1442192 5746850 Daci_1295 Delftia acidovorans SPH-1 hypothetical protein YP_001562324.1 1441218 D 398578 CDS YP_001562325.1 160896743 5746851 1442194..1442952 1 NC_010002.1 PFAM: Asp/Glu/hydantoin racemase; KEGG: vei:Veis_4205 Asp/Glu racemase; Asp/Glu/hydantoin racemase 1442952 5746851 Daci_1296 Delftia acidovorans SPH-1 Asp/Glu/hydantoin racemase YP_001562325.1 1442194 D 398578 CDS YP_001562326.1 160896744 5746852 complement(1443122..1443592) 1 NC_010002.1 PFAM: Peptidoglycan-binding LysM; transport-associated; KEGG: ajs:Ajs_0533 peptidoglycan-binding LysM; transport-associated protein 1443592 5746852 Daci_1297 Delftia acidovorans SPH-1 transport-associated protein YP_001562326.1 1443122 R 398578 CDS YP_001562327.1 160896745 5746853 1443736..1444590 1 NC_010002.1 type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase 1444590 5746853 Daci_1298 Delftia acidovorans SPH-1 pantothenate kinase YP_001562327.1 1443736 D 398578 CDS YP_001562328.1 160896746 5746854 1444741..1446468 1 NC_010002.1 KEGG: aav:Aave_4160 general secretory pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; general secretory pathway protein E 1446468 5746854 Daci_1299 Delftia acidovorans SPH-1 general secretory pathway protein E YP_001562328.1 1444741 D 398578 CDS YP_001562329.1 160896747 5746855 1446461..1447678 1 NC_010002.1 PFAM: type II secretion system protein; KEGG: aav:Aave_4159 type II secretion system protein; type II secretion system protein 1447678 5746855 Daci_1300 Delftia acidovorans SPH-1 type II secretion system protein YP_001562329.1 1446461 D 398578 CDS YP_001562330.1 160896748 5746856 1447711..1448151 1 NC_010002.1 TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: aav:Aave_4158 general secretion pathway protein G; general secretion pathway protein G 1448151 5746856 Daci_1301 Delftia acidovorans SPH-1 general secretion pathway protein G YP_001562330.1 1447711 D 398578 CDS YP_001562331.1 160896749 5746857 1448210..1448656 1 NC_010002.1 TIGRFAM: general secretion pathway protein H; KEGG: vei:Veis_0685 general secretion pathway protein H; general secretion pathway protein H 1448656 5746857 Daci_1302 Delftia acidovorans SPH-1 general secretion pathway protein H YP_001562331.1 1448210 D 398578 CDS YP_001562332.1 160896750 5746858 1448656..1449060 1 NC_010002.1 KEGG: vei:Veis_0684 general secretion pathway protein I; general secretion pathway protein I 1449060 5746858 Daci_1303 Delftia acidovorans SPH-1 general secretion pathway protein I YP_001562332.1 1448656 D 398578 CDS YP_001562333.1 160896751 5746859 1449057..1449737 1 NC_010002.1 KEGG: aav:Aave_4155 general secretion pathway protein J; general secretion pathway protein J 1449737 5746859 Daci_1304 Delftia acidovorans SPH-1 general secretion pathway protein J YP_001562333.1 1449057 D 398578 CDS YP_001562334.1 160896752 5746860 1449734..1450522 1 NC_010002.1 KEGG: vei:Veis_0682 general secretory pathway protein K; general secretory pathway protein K 1450522 5746860 Daci_1305 Delftia acidovorans SPH-1 general secretory pathway protein K YP_001562334.1 1449734 D 398578 CDS YP_001562335.1 160896753 5746861 1450685..1451740 1 NC_010002.1 PFAM: Fimbrial assembly family protein; KEGG: aav:Aave_4153 fimbrial assembly family protein; fimbrial assembly family protein 1451740 5746861 Daci_1306 Delftia acidovorans SPH-1 fimbrial assembly family protein YP_001562335.1 1450685 D 398578 CDS YP_001562336.1 160896754 5746862 1451737..1452312 1 NC_010002.1 KEGG: aav:Aave_4152 general secretion pathway protein M; general secretion pathway protein M 1452312 5746862 Daci_1307 Delftia acidovorans SPH-1 general secretion pathway protein M YP_001562336.1 1451737 D 398578 CDS YP_001562337.1 160896755 5746863 1452309..1452977 1 NC_010002.1 KEGG: aav:Aave_4151 hypothetical protein; hypothetical protein 1452977 5746863 Daci_1308 Delftia acidovorans SPH-1 hypothetical protein YP_001562337.1 1452309 D 398578 CDS YP_001562338.1 160896756 5746864 1452998..1455457 1 NC_010002.1 TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: aav:Aave_4150 general secretion pathway protein D; general secretion pathway protein D 1455457 5746864 Daci_1309 Delftia acidovorans SPH-1 general secretion pathway protein D YP_001562338.1 1452998 D 398578 CDS YP_001562339.1 160896757 5746865 1455499..1455921 1 NC_010002.1 KEGG: vei:Veis_0677 hypothetical protein; hypothetical protein 1455921 5746865 Daci_1310 Delftia acidovorans SPH-1 hypothetical protein YP_001562339.1 1455499 D 398578 CDS YP_001562340.1 160896758 5746866 1456445..1458064 1 NC_010002.1 KEGG: aav:Aave_4148 hypothetical protein; hypothetical protein 1458064 5746866 Daci_1311 Delftia acidovorans SPH-1 hypothetical protein YP_001562340.1 1456445 D 398578 CDS YP_001562341.1 160896759 5746867 1458145..1459080 1 NC_010002.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: aav:Aave_4147 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 1459080 5746867 Daci_1312 Delftia acidovorans SPH-1 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001562341.1 1458145 D 398578 CDS YP_001562342.1 160896760 5746868 1459226..1460026 1 NC_010002.1 PFAM: ABC-2 type transporter; KEGG: aav:Aave_4146 ABC-2 type transporter; ABC-2 type transporter 1460026 5746868 Daci_1313 Delftia acidovorans SPH-1 ABC-2 type transporter YP_001562342.1 1459226 D 398578 CDS YP_001562343.1 160896761 5746869 1460023..1461297 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_4145 ABC transporter-related protein; ABC transporter-like protein 1461297 5746869 Daci_1314 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001562343.1 1460023 D 398578 CDS YP_001562344.1 160896762 5746870 1461294..1462187 1 NC_010002.1 KEGG: aav:Aave_4144 hypothetical protein; hypothetical protein 1462187 5746870 Daci_1315 Delftia acidovorans SPH-1 hypothetical protein YP_001562344.1 1461294 D 398578 CDS YP_001562345.1 160896763 5746871 1462208..1463089 1 NC_010002.1 PFAM: Methyltransferase type 12; KEGG: aav:Aave_4143 methyltransferase type 12; type 12 methyltransferase 1463089 5746871 Daci_1316 Delftia acidovorans SPH-1 type 12 methyltransferase YP_001562345.1 1462208 D 398578 CDS YP_001562346.1 160896764 5746872 complement(1463134..1465815) 1 NC_010002.1 KEGG: efa:EF2179 hypothetical protein; hypothetical protein 1465815 5746872 Daci_1317 Delftia acidovorans SPH-1 hypothetical protein YP_001562346.1 1463134 R 398578 CDS YP_001562347.1 160896765 5746873 complement(1465840..1469784) 1 NC_010002.1 PFAM: glycosyl transferase family 2; methyltransferase small; Methionine biosynthesis MetW protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: aav:Aave_4142 glycosyl transferase, family 2; glycosyl transferase family protein 1469784 5746873 Daci_1318 Delftia acidovorans SPH-1 glycosyl transferase family protein YP_001562347.1 1465840 R 398578 CDS YP_001562348.1 160896766 5746874 1469940..1470713 1 NC_010002.1 KEGG: vei:Veis_1228 glycosyl transferase, family 2; glycosyl transferase family protein 1470713 5746874 Daci_1319 Delftia acidovorans SPH-1 glycosyl transferase family protein YP_001562348.1 1469940 D 398578 CDS YP_001562349.1 160896767 5746875 1470719..1471822 1 NC_010002.1 PFAM: glycosyl transferase family 4; KEGG: vei:Veis_1227 glycosyl transferase, family 4; glycosyl transferase family protein 1471822 5746875 Daci_1320 Delftia acidovorans SPH-1 glycosyl transferase family protein YP_001562349.1 1470719 D 398578 CDS YP_001562350.1 160896768 5746876 1471932..1472822 1 NC_010002.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 1472822 5746876 Daci_1321 Delftia acidovorans SPH-1 acetylglutamate kinase YP_001562350.1 1471932 D 398578 CDS YP_001562351.1 160896769 5746877 1472944..1473663 1 NC_010002.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: aav:Aave_4138 two component transcriptional regulator, winged helix family; two component transcriptional regulator 1473663 5746877 Daci_1322 Delftia acidovorans SPH-1 two component transcriptional regulator YP_001562351.1 1472944 D 398578 CDS YP_001562352.1 160896770 5746878 1473701..1475188 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: aav:Aave_4137 integral membrane sensor signal transduction histidine kinase; histidine kinase 1475188 5746878 Daci_1323 Delftia acidovorans SPH-1 histidine kinase YP_001562352.1 1473701 D 398578 CDS YP_001562353.1 160896771 5746879 1475271..1475966 1 NC_010002.1 FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly; nucleoid occlusion protein 1475966 slmA 5746879 slmA Delftia acidovorans SPH-1 nucleoid occlusion protein YP_001562353.1 1475271 D 398578 CDS YP_001562354.1 160896772 5746880 complement(1476070..1476582) 1 NC_010002.1 KEGG: aav:Aave_4135 hypothetical protein; hypothetical protein 1476582 5746880 Daci_1325 Delftia acidovorans SPH-1 hypothetical protein YP_001562354.1 1476070 R 398578 CDS YP_001562355.1 160896773 5746881 1476729..1477343 1 NC_010002.1 PFAM: peptidase S24 and S26 domain protein; KEGG: ppd:Ppro_0272 putative phage repressor; putative phage repressor 1477343 5746881 Daci_1326 Delftia acidovorans SPH-1 putative phage repressor YP_001562355.1 1476729 D 398578 CDS YP_001562356.1 160896774 5746882 1477592..1478269 1 NC_010002.1 KEGG: aav:Aave_4101 hypothetical protein; hypothetical protein 1478269 5746882 Daci_1327 Delftia acidovorans SPH-1 hypothetical protein YP_001562356.1 1477592 D 398578 CDS YP_001562357.1 160896775 5746883 1478399..1479325 1 NC_010002.1 KEGG: rsq:Rsph17025_2092 hypothetical protein; hypothetical protein 1479325 5746883 Daci_1328 Delftia acidovorans SPH-1 hypothetical protein YP_001562357.1 1478399 D 398578 CDS YP_001562358.1 160896776 5746884 1479369..1479824 1 NC_010002.1 hypothetical protein 1479824 5746884 Daci_1329 Delftia acidovorans SPH-1 hypothetical protein YP_001562358.1 1479369 D 398578 CDS YP_001562359.1 160896777 5746885 1479854..1480144 1 NC_010002.1 PFAM: Protein of unknown function DUF1799 phage-related; KEGG: pap:PSPA7_2416 phage protein; hypothetical protein 1480144 5746885 Daci_1330 Delftia acidovorans SPH-1 hypothetical protein YP_001562359.1 1479854 D 398578 CDS YP_001562360.1 160896778 5746886 1480215..1485182 1 NC_010002.1 KEGG: aav:Aave_1628 prophage tail length tape measure; hypothetical protein 1485182 5746886 Daci_1331 Delftia acidovorans SPH-1 hypothetical protein YP_001562360.1 1480215 D 398578 CDS YP_001562361.1 160896779 5746887 1485179..1486114 1 NC_010002.1 KEGG: aav:Aave_1629 carbohydrate-binding family V/XII; hypothetical protein 1486114 5746887 Daci_1332 Delftia acidovorans SPH-1 hypothetical protein YP_001562361.1 1485179 D 398578 CDS YP_001562362.1 160896780 5746888 1486092..1486793 1 NC_010002.1 KEGG: sit:TM1040_1609 hypothetical protein; hypothetical protein 1486793 5746888 Daci_1333 Delftia acidovorans SPH-1 hypothetical protein YP_001562362.1 1486092 D 398578 CDS YP_001562363.1 160896781 5746889 1486784..1487896 1 NC_010002.1 hypothetical protein 1487896 5746889 Daci_1334 Delftia acidovorans SPH-1 hypothetical protein YP_001562363.1 1486784 D 398578 CDS YP_001562364.1 160896782 5746890 1487893..1488435 1 NC_010002.1 hypothetical protein 1488435 5746890 Daci_1335 Delftia acidovorans SPH-1 hypothetical protein YP_001562364.1 1487893 D 398578 CDS YP_001562365.1 160896783 5746891 1488585..1489292 1 NC_010002.1 PFAM: regulatory protein TetR; KEGG: ajs:Ajs_0591 transcriptional regulator, TetR family; TetR family transcriptional regulator 1489292 5746891 Daci_1336 Delftia acidovorans SPH-1 TetR family transcriptional regulator YP_001562365.1 1488585 D 398578 CDS YP_001562366.1 160896784 5746892 1489356..1491161 1 NC_010002.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: aav:Aave_4089 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 1491161 5746892 Daci_1337 Delftia acidovorans SPH-1 acyl-CoA dehydrogenase domain-containing protein YP_001562366.1 1489356 D 398578 CDS YP_001562367.1 160896785 5746893 1491242..1491682 1 NC_010002.1 KEGG: ajs:Ajs_0593 hypothetical protein; hypothetical protein 1491682 5746893 Daci_1338 Delftia acidovorans SPH-1 hypothetical protein YP_001562367.1 1491242 D 398578 CDS YP_001562368.1 160896786 5746894 1491736..1494138 1 NC_010002.1 PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: ajs:Ajs_0594 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; NAD-binding 3-hydroxyacyl-CoA dehydrogenase 1494138 5746894 Daci_1339 Delftia acidovorans SPH-1 NAD-binding 3-hydroxyacyl-CoA dehydrogenase YP_001562368.1 1491736 D 398578 CDS YP_001562369.1 160896787 5746895 1494162..1495358 1 NC_010002.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 1495358 5746895 Daci_1340 Delftia acidovorans SPH-1 acetyl-CoA acetyltransferase YP_001562369.1 1494162 D 398578 CDS YP_001562370.1 160896788 5746896 1495463..1496365 1 NC_010002.1 KEGG: ajs:Ajs_0596 putative hydrolase; putative hydrolase 1496365 5746896 Daci_1341 Delftia acidovorans SPH-1 putative hydrolase YP_001562370.1 1495463 D 398578 CDS YP_001562371.1 160896789 5746897 1496403..1497233 1 NC_010002.1 KEGG: vei:Veis_1900 hypothetical protein; hypothetical protein 1497233 5746897 Daci_1342 Delftia acidovorans SPH-1 hypothetical protein YP_001562371.1 1496403 D 398578 CDS YP_001562372.1 160896790 5746898 1497250..1498044 1 NC_010002.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 1498044 5746898 Daci_1343 Delftia acidovorans SPH-1 enoyl-CoA hydratase YP_001562372.1 1497250 D 398578 CDS YP_001562373.1 160896791 5746899 1498038..1498538 1 NC_010002.1 PFAM: thioesterase superfamily protein; KEGG: ajs:Ajs_0599 uncharacterized domain 1; hypothetical protein 1498538 5746899 Daci_1344 Delftia acidovorans SPH-1 hypothetical protein YP_001562373.1 1498038 D 398578 CDS YP_001562374.1 160896792 5746900 complement(1498579..1499958) 1 NC_010002.1 PFAM: multi antimicrobial extrusion protein MatE; KEGG: rpb:RPB_1675 MATE efflux family protein; multi anti extrusion protein MatE 1499958 5746900 Daci_1345 Delftia acidovorans SPH-1 multi anti extrusion protein MatE YP_001562374.1 1498579 R 398578 CDS YP_001562375.1 160896793 5746901 complement(1499955..1500422) 1 NC_010002.1 PFAM: regulatory protein MarR; KEGG: mca:MCA2812 transcriptional regulator, MarR family; MarR family transcriptional regulator 1500422 5746901 Daci_1346 Delftia acidovorans SPH-1 MarR family transcriptional regulator YP_001562375.1 1499955 R 398578 CDS YP_001562376.1 160896794 5746902 1500641..1501306 1 NC_010002.1 PFAM: protein of unknown function DUF583; KEGG: ajs:Ajs_0600 protein of unknown function DUF583; hypothetical protein 1501306 5746902 Daci_1347 Delftia acidovorans SPH-1 hypothetical protein YP_001562376.1 1500641 D 398578 CDS YP_001562377.1 160896795 5746903 complement(1501382..1501858) 1 NC_010002.1 PFAM: thioesterase superfamily protein; KEGG: aav:Aave_4080 thioesterase superfamily protein; thioesterase superfamily protein 1501858 5746903 Daci_1348 Delftia acidovorans SPH-1 thioesterase superfamily protein YP_001562377.1 1501382 R 398578 CDS YP_001562378.1 160896796 5746904 1501900..1503726 1 NC_010002.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rfr:Rfer_3493 ABC transporter related; ABC transporter-like protein 1503726 5746904 Daci_1349 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001562378.1 1501900 D 398578 CDS YP_001562379.1 160896797 5746905 complement(1503787..1505754) 1 NC_010002.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: bbr:BB3096 putative peptidase; peptidase S9 prolyl oligopeptidase 1505754 5746905 Daci_1350 Delftia acidovorans SPH-1 peptidase S9 prolyl oligopeptidase YP_001562379.1 1503787 R 398578 CDS YP_001562380.1 160896798 5746906 1505910..1506668 1 NC_010002.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pna:Pnap_2731 transcriptional regulator, GntR family; GntR family transcriptional regulator 1506668 5746906 Daci_1351 Delftia acidovorans SPH-1 GntR family transcriptional regulator YP_001562380.1 1505910 D 398578 CDS YP_001562381.1 160896799 5746907 1506763..1507854 1 NC_010002.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: pna:Pnap_2725 Rieske (2Fe-2S) domain protein; vanillate monooxygenase 1507854 5746907 Daci_1352 Delftia acidovorans SPH-1 vanillate monooxygenase YP_001562381.1 1506763 D 398578 CDS YP_001562382.1 160896800 5746908 1507953..1508426 1 NC_010002.1 PFAM: regulatory protein MarR; KEGG: rfr:Rfer_0279 transcriptional regulator, MarR family; MarR family transcriptional regulator 1508426 5746908 Daci_1353 Delftia acidovorans SPH-1 MarR family transcriptional regulator YP_001562382.1 1507953 D 398578 CDS YP_001562383.1 160896801 5746909 1508681..1510033 1 NC_010002.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: ppu:PP_3740 major facilitator family transporter; major facilitator transporter 1510033 5746909 Daci_1354 Delftia acidovorans SPH-1 major facilitator transporter YP_001562383.1 1508681 D 398578 CDS YP_001562384.1 160896802 5746910 1510064..1511140 1 NC_010002.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: bam:Bamb_4593 Rieske (2Fe-2S) domain protein; Rieske (2Fe-2S) domain-containing protein 1511140 5746910 Daci_1355 Delftia acidovorans SPH-1 Rieske (2Fe-2S) domain-containing protein YP_001562384.1 1510064 D 398578 CDS YP_001562385.1 160896803 5746911 1511173..1512135 1 NC_010002.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: rfr:Rfer_0281 ferredoxin; phthalate 4,5-dioxygenase 1512135 5746911 Daci_1356 Delftia acidovorans SPH-1 phthalate 4,5-dioxygenase YP_001562385.1 1511173 D 398578 CDS YP_001562386.1 160896804 5746912 1512242..1513189 1 NC_010002.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: rme:Rmet_5796 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 1513189 5746912 Daci_1357 Delftia acidovorans SPH-1 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_001562386.1 1512242 D 398578 CDS YP_001562387.1 160896805 5746913 complement(1513198..1513623) 1 NC_010002.1 KEGG: xcb:XC_0350 hypothetical protein; hypothetical protein 1513623 5746913 Daci_1358 Delftia acidovorans SPH-1 hypothetical protein YP_001562387.1 1513198 R 398578 CDS YP_001562388.1 160896806 5746914 1513755..1514411 1 NC_010002.1 PFAM: regulatory protein TetR; KEGG: aav:Aave_3134 transcriptional regulator, TetR family; TetR family transcriptional regulator 1514411 5746914 Daci_1359 Delftia acidovorans SPH-1 TetR family transcriptional regulator YP_001562388.1 1513755 D 398578 CDS YP_001562389.1 160896807 5746915 complement(1514568..1515611) 1 NC_010002.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: ajs:Ajs_0604 TRAP dicarboxylate transporter, DctP subunit; TRAP dicarboxylate transporter subunit DctP 1515611 5746915 Daci_1360 Delftia acidovorans SPH-1 TRAP dicarboxylate transporter subunit DctP YP_001562389.1 1514568 R 398578 CDS YP_001562390.1 160896808 5746916 complement(1515644..1516942) 1 NC_010002.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: ajs:Ajs_0605 TRAP dicarboxylate transporter, DctM subunit; TRAP dicarboxylate transporter subunit DctM 1516942 5746916 Daci_1361 Delftia acidovorans SPH-1 TRAP dicarboxylate transporter subunit DctM YP_001562390.1 1515644 R 398578 CDS YP_001562391.1 160896809 5746917 complement(1516939..1517484) 1 NC_010002.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: aav:Aave_4076 tripartite ATP-independent periplasmic transporter, DctQ component; tripartite ATP-independent periplasmic transporter DctQ 1517484 5746917 Daci_1362 Delftia acidovorans SPH-1 tripartite ATP-independent periplasmic transporter DctQ YP_001562391.1 1516939 R 398578 CDS YP_001562392.1 160896810 5746918 1517802..1518746 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_0607 transcriptional regulator, LysR family; LysR family transcriptional regulator 1518746 5746918 Daci_1363 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001562392.1 1517802 D 398578 CDS YP_001562393.1 160896811 5746919 1519190..1520089 1 NC_010002.1 PFAM: extracellular solute-binding protein family 3; KEGG: ajs:Ajs_0609 extracellular solute-binding protein, family 3; extracellular solute-binding protein 1520089 5746919 Daci_1364 Delftia acidovorans SPH-1 extracellular solute-binding protein YP_001562393.1 1519190 D 398578 CDS YP_001562394.1 160896812 5746920 1520202..1520954 1 NC_010002.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_0610 polar amino acid ABC transporter, inner membrane subunit; polar amino acid ABC transporter inner membrane protein 1520954 5746920 Daci_1365 Delftia acidovorans SPH-1 polar amino acid ABC transporter inner membrane protein YP_001562394.1 1520202 D 398578 CDS YP_001562395.1 160896813 5746921 1520956..1521627 1 NC_010002.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_0611 polar amino acid ABC transporter, inner membrane subunit; polar amino acid ABC transporter inner membrane protein 1521627 5746921 Daci_1366 Delftia acidovorans SPH-1 polar amino acid ABC transporter inner membrane protein YP_001562395.1 1520956 D 398578 CDS YP_001562396.1 160896814 5746922 1521778..1522515 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_0612 ABC transporter related; ABC transporter-like protein 1522515 5746922 Daci_1367 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001562396.1 1521778 D 398578 CDS YP_001562397.1 160896815 5746923 complement(1522571..1523515) 1 NC_010002.1 PFAM: sugar isomerase (SIS); KEGG: aav:Aave_1915 transcriptional regulator, RpiR family; RpiR family transcriptional regulator 1523515 5746923 Daci_1368 Delftia acidovorans SPH-1 RpiR family transcriptional regulator YP_001562397.1 1522571 R 398578 CDS YP_001562398.1 160896816 5746924 1523593..1524777 1 NC_010002.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: aav:Aave_1914 peptidase M20; peptidase dimerisation domain-containing protein 1524777 5746924 Daci_1369 Delftia acidovorans SPH-1 peptidase dimerisation domain-containing protein YP_001562398.1 1523593 D 398578 CDS YP_001562399.1 160896817 5746925 1524792..1525808 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: aav:Aave_1913 uncharacterized protein UPF0065; hypothetical protein 1525808 5746925 Daci_1370 Delftia acidovorans SPH-1 hypothetical protein YP_001562399.1 1524792 D 398578 CDS YP_001562400.1 160896818 5746926 1525885..1526913 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: aav:Aave_1913 uncharacterized protein UPF0065; hypothetical protein 1526913 5746926 Daci_1371 Delftia acidovorans SPH-1 hypothetical protein YP_001562400.1 1525885 D 398578 CDS YP_001562401.1 160896819 5746927 complement(1526938..1527927) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: rme:Rmet_5161 uncharacterized protein UPF0065; hypothetical protein 1527927 5746927 Daci_1372 Delftia acidovorans SPH-1 hypothetical protein YP_001562401.1 1526938 R 398578 CDS YP_001562402.1 160896820 5746928 complement(1527979..1529232) 1 NC_010002.1 PFAM: beta-lactamase domain protein; KEGG: reu:Reut_B3706 beta-lactamase-like; beta-lactamase domain-containing protein 1529232 5746928 Daci_1373 Delftia acidovorans SPH-1 beta-lactamase domain-containing protein YP_001562402.1 1527979 R 398578 CDS YP_001562403.1 160896821 5746929 complement(1529229..1530566) 1 NC_010002.1 PFAM: protein of unknown function DUF1214; protein of unknown function DUF1254; KEGG: reu:Reut_B3898 protein of unknown function DUF1214:protein of unknown function DUF1254; hypothetical protein 1530566 5746929 Daci_1374 Delftia acidovorans SPH-1 hypothetical protein YP_001562403.1 1529229 R 398578 CDS YP_001562404.1 160896822 5746930 complement(1530563..1531960) 1 NC_010002.1 PFAM: protein of unknown function DUF1214; protein of unknown function DUF1254; KEGG: reu:Reut_B3704 protein of unknown function DUF1214:protein of unknown function DUF1254; hypothetical protein 1531960 5746930 Daci_1375 Delftia acidovorans SPH-1 hypothetical protein YP_001562404.1 1530563 R 398578 CDS YP_001562405.1 160896823 5746931 complement(1531985..1533007) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: rme:Rmet_3913 uncharacterized protein UPF0065; hypothetical protein 1533007 5746931 Daci_1376 Delftia acidovorans SPH-1 hypothetical protein YP_001562405.1 1531985 R 398578 CDS YP_001562406.1 160896824 5746932 complement(1533004..1535121) 1 NC_010002.1 PFAM: CoA-binding domain protein; KEGG: rme:Rmet_3916 CoA-binding; CoA-binding domain-containing protein 1535121 5746932 Daci_1377 Delftia acidovorans SPH-1 CoA-binding domain-containing protein YP_001562406.1 1533004 R 398578 CDS YP_001562407.1 160896825 5746933 complement(1535131..1536195) 1 NC_010002.1 PFAM: porin Gram-negative type; KEGG: reu:Reut_B3712 porin, gram-negative type; porin 1536195 5746933 Daci_1378 Delftia acidovorans SPH-1 porin YP_001562407.1 1535131 R 398578 CDS YP_001562408.1 160896826 5746934 1536349..1537086 1 NC_010002.1 PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: abo:ABO_1600 transcriptional regulator Anr; Crp/FNR family transcriptional regulator 1537086 5746934 Daci_1379 Delftia acidovorans SPH-1 Crp/FNR family transcriptional regulator YP_001562408.1 1536349 D 398578 CDS YP_001562409.1 160896827 5746935 complement(1537103..1538032) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: psb:Psyr_3111 regulatory protein, LysR:LysR, substrate-binding; LysR family transcriptional regulator 1538032 5746935 Daci_1380 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001562409.1 1537103 R 398578 CDS YP_001562410.1 160896828 5746936 1538070..1539134 1 NC_010002.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: vei:Veis_2905 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 1539134 5746936 Daci_1381 Delftia acidovorans SPH-1 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_001562410.1 1538070 D 398578 CDS YP_001562411.1 160896829 5746937 1539158..1539853 1 NC_010002.1 PFAM: Dimethylmenaquinone methyltransferase; KEGG: smd:Smed_5904 dimethylmenaquinone methyltransferase; dimethylmenaquinone methyltransferase 1539853 5746937 Daci_1382 Delftia acidovorans SPH-1 dimethylmenaquinone methyltransferase YP_001562411.1 1539158 D 398578 CDS YP_001562412.1 160896830 5746938 1539921..1540898 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: vei:Veis_2904 uncharacterized protein UPF0065; hypothetical protein 1540898 5746938 Daci_1383 Delftia acidovorans SPH-1 hypothetical protein YP_001562412.1 1539921 D 398578 CDS YP_001562413.1 160896831 5746939 1540901..1542136 1 NC_010002.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: bte:BTH_II0813 dehydrogenase, FMN-dependent family; L-lactate dehydrogenase 1542136 5746939 Daci_1384 Delftia acidovorans SPH-1 L-lactate dehydrogenase YP_001562413.1 1540901 D 398578 CDS YP_001562414.1 160896832 5746940 1542209..1543249 1 NC_010002.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 1543249 5746940 Daci_1385 Delftia acidovorans SPH-1 dihydroorotase YP_001562414.1 1542209 D 398578 CDS YP_001562415.1 160896833 5746941 1543283..1544194 1 NC_010002.1 PFAM: protein of unknown function DUF88; KEGG: aav:Aave_4318 protein of unknown function DUF88; hypothetical protein 1544194 5746941 Daci_1386 Delftia acidovorans SPH-1 hypothetical protein YP_001562415.1 1543283 D 398578 CDS YP_001562416.1 160896834 5746942 1544191..1545000 1 NC_010002.1 KEGG: aav:Aave_4317 putative transmembrane protein; putative transmembrane protein 1545000 5746942 Daci_1387 Delftia acidovorans SPH-1 putative transmembrane protein YP_001562416.1 1544191 D 398578 CDS YP_001562417.1 160896835 5746943 1544997..1545962 1 NC_010002.1 putative metalloprotease; heat shock protein HtpX 1545962 5746943 Daci_1388 Delftia acidovorans SPH-1 heat shock protein HtpX YP_001562417.1 1544997 D 398578 CDS YP_001562418.1 160896836 5746944 1546117..1546374 1 NC_010002.1 TIGRFAM: prevent-host-death family protein; KEGG: nwi:Nwi_0856 prevent-host-death protein; prevent-host-death family protein 1546374 5746944 Daci_1389 Delftia acidovorans SPH-1 prevent-host-death family protein YP_001562418.1 1546117 D 398578 CDS YP_001562419.1 160896837 5746945 1546374..1546799 1 NC_010002.1 PFAM: PilT protein domain protein; KEGG: gox:GOX2554 plasmid stability-like protein; PilT domain-containing protein 1546799 5746945 Daci_1390 Delftia acidovorans SPH-1 PilT domain-containing protein YP_001562419.1 1546374 D 398578 CDS YP_001562420.1 160896838 5746946 1546928..1547287 1 NC_010002.1 KEGG: ajs:Ajs_3741 hypothetical protein; hypothetical protein 1547287 5746946 Daci_1391 Delftia acidovorans SPH-1 hypothetical protein YP_001562420.1 1546928 D 398578 CDS YP_001562421.1 160896839 5746947 complement(1547289..1548206) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_3740 transcriptional regulator, LysR family; LysR family transcriptional regulator 1548206 5746947 Daci_1392 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001562421.1 1547289 R 398578 CDS YP_001562422.1 160896840 5746948 1548481..1550598 1 NC_010002.1 PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: ajs:Ajs_3739 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; NAD-binding 3-hydroxyacyl-CoA dehydrogenase 1550598 5746948 Daci_1393 Delftia acidovorans SPH-1 NAD-binding 3-hydroxyacyl-CoA dehydrogenase YP_001562422.1 1548481 D 398578 CDS YP_001562423.1 160896841 5746949 1550707..1551903 1 NC_010002.1 KEGG: ajs:Ajs_3738 acetyl-CoA acetyltransferases; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase 1551903 5746949 Daci_1394 Delftia acidovorans SPH-1 acetyl-CoA acetyltransferase YP_001562423.1 1550707 D 398578 CDS YP_001562424.1 160896842 5746950 1552070..1553266 1 NC_010002.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: aav:Aave_4313 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 1553266 5746950 Daci_1395 Delftia acidovorans SPH-1 acyl-CoA dehydrogenase domain-containing protein YP_001562424.1 1552070 D 398578 CDS YP_001562425.1 160896843 5746951 1553287..1554423 1 NC_010002.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_3736 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 1554423 5746951 Daci_1396 Delftia acidovorans SPH-1 acyl-CoA dehydrogenase domain-containing protein YP_001562425.1 1553287 D 398578 CDS YP_001562426.1 160896844 5746952 1554440..1555240 1 NC_010002.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 1555240 5746952 Daci_1397 Delftia acidovorans SPH-1 enoyl-CoA hydratase YP_001562426.1 1554440 D 398578 CDS YP_001562427.1 160896845 5746953 1555283..1556539 1 NC_010002.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: ajs:Ajs_3734 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 1556539 5746953 Daci_1398 Delftia acidovorans SPH-1 L-carnitine dehydratase/bile acid-inducible protein F YP_001562427.1 1555283 D 398578 CDS YP_001562428.1 160896846 5746954 1556658..1557677 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: aav:Aave_4309 uncharacterized protein UPF0065; hypothetical protein 1557677 5746954 Daci_1399 Delftia acidovorans SPH-1 hypothetical protein YP_001562428.1 1556658 D 398578 CDS YP_001562429.1 160896847 5746955 1557743..1558756 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_3733 uncharacterized protein UPF0065; hypothetical protein 1558756 5746955 Daci_1400 Delftia acidovorans SPH-1 hypothetical protein YP_001562429.1 1557743 D 398578 CDS YP_001562430.1 160896848 5746956 1558764..1559738 1 NC_010002.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: ajs:Ajs_3732 2-nitropropane dioxygenase, NPD; 2-nitropropane dioxygenase 1559738 5746956 Daci_1401 Delftia acidovorans SPH-1 2-nitropropane dioxygenase YP_001562430.1 1558764 D 398578 CDS YP_001562431.1 160896849 5746957 1559861..1560610 1 NC_010002.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: ajs:Ajs_3731 electron transfer flavoprotein beta-subunit; electron transfer flavoprotein subunit alpha/beta 1560610 5746957 Daci_1402 Delftia acidovorans SPH-1 electron transfer flavoprotein subunit alpha/beta YP_001562431.1 1559861 D 398578 CDS YP_001562432.1 160896850 5746958 1560624..1561556 1 NC_010002.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: ajs:Ajs_2809 electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein subunit alpha 1561556 5746958 Daci_1403 Delftia acidovorans SPH-1 electron transfer flavoprotein subunit alpha YP_001562432.1 1560624 D 398578 CDS YP_001562433.1 160896851 5746959 1561682..1562668 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: reh:H16_A1555 probable extra-cytoplasmic solute receptor; hypothetical protein 1562668 5746959 Daci_1404 Delftia acidovorans SPH-1 hypothetical protein YP_001562433.1 1561682 D 398578 CDS YP_001562434.1 160896852 5746960 1562755..1564299 1 NC_010002.1 PFAM: AMP-dependent synthetase and ligase; KEGG: reh:H16_A2076 long-chain-fatty-acid--CoA ligase; AMP-dependent synthetase/ligase 1564299 5746960 Daci_1405 Delftia acidovorans SPH-1 AMP-dependent synthetase/ligase YP_001562434.1 1562755 D 398578 CDS YP_001562435.1 160896853 5746961 1564347..1565117 1 NC_010002.1 PFAM: class II aldolase/adducin family protein; KEGG: aav:Aave_4305 class II aldolase/adducin family protein; aldolase II superfamily protein 1565117 5746961 Daci_1406 Delftia acidovorans SPH-1 aldolase II superfamily protein YP_001562435.1 1564347 D 398578 CDS YP_001562436.1 160896854 5746962 1565126..1566055 1 NC_010002.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: reh:H16_B0841 D-3-phosphoglycerate dehydrogenase; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 1566055 5746962 Daci_1407 Delftia acidovorans SPH-1 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_001562436.1 1565126 D 398578 CDS YP_001562437.1 160896855 5746963 1566211..1567206 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: aav:Aave_4304 uncharacterized protein UPF0065; hypothetical protein 1567206 5746963 Daci_1408 Delftia acidovorans SPH-1 hypothetical protein YP_001562437.1 1566211 D 398578 CDS YP_001562438.1 160896856 5746964 1567455..1568084 1 NC_010002.1 KEGG: ppf:Pput_3520 integrase, catalytic region; integrase catalytic subunit 1568084 5746964 Daci_1409 Delftia acidovorans SPH-1 integrase catalytic subunit YP_001562438.1 1567455 D 398578 CDS YP_001562439.1 160896857 5746965 1568126..1568569 1 NC_010002.1 PFAM: transposase IS3/IS911 family protein; KEGG: pna:Pnap_4532 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 1568569 5746965 Daci_1410 Delftia acidovorans SPH-1 transposase IS3/IS911 family protein YP_001562439.1 1568126 D 398578 CDS YP_001562440.1 160896858 5746966 1568545..1568895 1 NC_010002.1 PFAM: IS66 Orf2 family protein; KEGG: reu:Reut_C6378 IS66 Orf2 like; IS66 Orf2 family protein 1568895 5746966 Daci_1411 Delftia acidovorans SPH-1 IS66 Orf2 family protein YP_001562440.1 1568545 D 398578 CDS YP_001562441.1 160896859 5746967 1568997..1570592 1 NC_010002.1 PFAM: transposase IS66; KEGG: pna:Pnap_2521 transposase IS66; transposase IS66 1570592 5746967 Daci_1412 Delftia acidovorans SPH-1 transposase IS66 YP_001562441.1 1568997 D 398578 CDS YP_001562442.1 160896860 5746968 complement(1570626..1571339) 1 NC_010002.1 TIGRFAM: yecA family protein; PFAM: SEC-C motif domain protein; KEGG: bvi:Bcep1808_2979 YecA family protein; yecA family protein 1571339 5746968 Daci_1413 Delftia acidovorans SPH-1 yecA family protein YP_001562442.1 1570626 R 398578 CDS YP_001562443.1 160896861 5746969 1571414..1572070 1 NC_010002.1 KEGG: pen:PSEEN4950 transposase; transposase 1572070 5746969 Daci_1414 Delftia acidovorans SPH-1 transposase YP_001562443.1 1571414 D 398578 CDS YP_001562444.1 160896862 5746970 complement(1572391..1572660) 1 NC_010002.1 hypothetical protein 1572660 5746970 Daci_1415 Delftia acidovorans SPH-1 hypothetical protein YP_001562444.1 1572391 R 398578 CDS YP_001562445.1 160896863 5746971 complement(1573137..1574156) 1 NC_010002.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: rme:Rmet_4871 transcriptional regulator, AraC family; AraC family transcriptional regulator 1574156 5746971 Daci_1416 Delftia acidovorans SPH-1 AraC family transcriptional regulator YP_001562445.1 1573137 R 398578 CDS YP_001562446.1 160896864 5746972 1574253..1575629 1 NC_010002.1 KEGG: reh:H16_A1453 putative peptidase, M20D subfamily; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 1575629 5746972 Daci_1417 Delftia acidovorans SPH-1 amidohydrolase YP_001562446.1 1574253 D 398578 CDS YP_001562447.1 160896865 5746973 complement(1575796..1576365) 1 NC_010002.1 TIGRFAM: conserved hypothetical integral membrane protein; PFAM: protein of unknown function DUF165; KEGG: xcb:XC_0564 hypothetical protein; hypothetical protein 1576365 5746973 Daci_1418 Delftia acidovorans SPH-1 hypothetical protein YP_001562447.1 1575796 R 398578 CDS YP_001562448.1 160896866 5746974 complement(1576362..1578146) 1 NC_010002.1 PFAM: FAD dependent oxidoreductase; KEGG: ajs:Ajs_3727 FAD dependent oxidoreductase; FAD dependent oxidoreductase 1578146 5746974 Daci_1419 Delftia acidovorans SPH-1 FAD dependent oxidoreductase YP_001562448.1 1576362 R 398578 CDS YP_001562449.1 160896867 5746975 1578634..1580649 1 NC_010002.1 TIGRFAM: filamentous haemagglutinin family outer membrane protein; adhesin HecA family; PFAM: filamentous haemagglutinin domain protein; KEGG: bam:Bamb_5443 filamentous haemagglutinin family outer membrane protein; filamentous hemagglutinin outer membrane protein 1580649 5746975 Daci_1420 Delftia acidovorans SPH-1 filamentous hemagglutinin outer membrane protein YP_001562449.1 1578634 D 398578 CDS YP_001562450.1 160896868 5746976 1580655..1582352 1 NC_010002.1 PFAM: Hemolysin activator HlyB domain protein; Polypeptide-transport-associated domain protein ShlB-type; KEGG: reu:Reut_A2932 hemolysin activator HlyB; polypeptide-transport-associated domain-containing protein 1582352 5746976 Daci_1421 Delftia acidovorans SPH-1 polypeptide-transport-associated domain-containing protein YP_001562450.1 1580655 D 398578 CDS YP_001562451.1 160896869 5746977 1582523..1584121 1 NC_010002.1 KEGG: ade:Adeh_0244 LigA; LigA protein 1584121 5746977 Daci_1422 Delftia acidovorans SPH-1 LigA protein YP_001562451.1 1582523 D 398578 CDS YP_001562452.1 160896870 5746978 complement(1584984..1586588) 1 NC_010002.1 KEGG: rci:RRC32 hypothetical protein; hypothetical protein 1586588 5746978 Daci_1423 Delftia acidovorans SPH-1 hypothetical protein YP_001562452.1 1584984 R 398578 CDS YP_001562453.1 160896871 5746979 1586619..1592804 1 NC_010002.1 TIGRFAM: adhesin HecA family; PFAM: Haemagluttinin repeat-containing protein; KEGG: bpl:BURPS1106A_1129 cell surface protein; adhesin 1592804 5746979 Daci_1424 Delftia acidovorans SPH-1 adhesin YP_001562453.1 1586619 D 398578 CDS YP_001562454.1 160896872 5746980 1593263..1593712 1 NC_010002.1 hypothetical protein 1593712 5746980 Daci_1425 Delftia acidovorans SPH-1 hypothetical protein YP_001562454.1 1593263 D 398578 CDS YP_001562455.1 160896873 5746981 1593939..1594193 1 NC_010002.1 hypothetical protein 1594193 5746981 Daci_1426 Delftia acidovorans SPH-1 hypothetical protein YP_001562455.1 1593939 D 398578 CDS YP_001562456.1 160896874 5746982 1594235..1594600 1 NC_010002.1 KEGG: bam:Bamb_5427 hypothetical protein; hypothetical protein 1594600 5746982 Daci_1427 Delftia acidovorans SPH-1 hypothetical protein YP_001562456.1 1594235 D 398578 CDS YP_001562457.1 160896875 5746983 1595100..1595504 1 NC_010002.1 KEGG: rso:RS03931 probable transmembrane protein; putative transmembrane protein 1595504 5746983 Daci_1428 Delftia acidovorans SPH-1 putative transmembrane protein YP_001562457.1 1595100 D 398578 CDS YP_001562458.1 160896876 5746984 1596010..1596273 1 NC_010002.1 KEGG: bam:Bamb_3781 hypothetical protein; hypothetical protein 1596273 5746984 Daci_1429 Delftia acidovorans SPH-1 hypothetical protein YP_001562458.1 1596010 D 398578 CDS YP_001562459.1 160896877 5746985 1596307..1596621 1 NC_010002.1 hypothetical protein 1596621 5746985 Daci_1430 Delftia acidovorans SPH-1 hypothetical protein YP_001562459.1 1596307 D 398578 CDS YP_001562460.1 160896878 5746986 1597126..1597536 1 NC_010002.1 hypothetical protein 1597536 5746986 Daci_1431 Delftia acidovorans SPH-1 hypothetical protein YP_001562460.1 1597126 D 398578 CDS YP_001562461.1 160896879 5746987 1597635..1598015 1 NC_010002.1 KEGG: reu:Reut_A2925 hypothetical protein; hypothetical protein 1598015 5746987 Daci_1432 Delftia acidovorans SPH-1 hypothetical protein YP_001562461.1 1597635 D 398578 CDS YP_001562462.1 160896880 5746988 1598163..1599881 1 NC_010002.1 PFAM: Heat shock protein 70; KEGG: rso:RSp0521 probable chaperone transmembrane protein; 2-alkenal reductase 1599881 5746988 Daci_1433 Delftia acidovorans SPH-1 2-alkenal reductase YP_001562462.1 1598163 D 398578 CDS YP_001562463.1 160896881 5746989 1599884..1601584 1 NC_010002.1 PFAM: heat shock protein DnaJ domain protein; KEGG: rso:RS00401 hypothetical protein; heat shock protein DnaJ domain-containing protein 1601584 5746989 Daci_1434 Delftia acidovorans SPH-1 heat shock protein DnaJ domain-containing protein YP_001562463.1 1599884 D 398578 CDS YP_001562464.1 160896882 5746990 1601817..1603805 1 NC_010002.1 KEGG: aav:Aave_3307 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 1603805 5746990 Daci_1435 Delftia acidovorans SPH-1 gamma-glutamyltransferase YP_001562464.1 1601817 D 398578 CDS YP_001562465.1 160896883 5746991 1604189..1605145 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: rme:Rmet_1719 uncharacterized protein UPF0065; hypothetical protein 1605145 5746991 Daci_1436 Delftia acidovorans SPH-1 hypothetical protein YP_001562465.1 1604189 D 398578 CDS YP_001562466.1 160896884 5746992 complement(1605151..1606584) 1 NC_010002.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 1606584 fumC 5746992 fumC Delftia acidovorans SPH-1 fumarate hydratase YP_001562466.1 1605151 R 398578 CDS YP_001562467.1 160896885 5746993 complement(1606589..1607581) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: vei:Veis_4597 uncharacterized protein UPF0065; hypothetical protein 1607581 5746993 Daci_1438 Delftia acidovorans SPH-1 hypothetical protein YP_001562467.1 1606589 R 398578 CDS YP_001562468.1 160896886 5746994 complement(1607626..1609008) 1 NC_010002.1 TIGRFAM: 3-carboxy-cis,cis-muconate cycloisomerase; PFAM: fumarate lyase; KEGG: vei:Veis_4598 fumarate lyase; 3-carboxy-cis,cis-muconate cycloisomerase 1609008 5746994 Daci_1439 Delftia acidovorans SPH-1 3-carboxy-cis,cis-muconate cycloisomerase YP_001562468.1 1607626 R 398578 CDS YP_001562469.1 160896887 5746995 1609106..1609852 1 NC_010002.1 PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: vei:Veis_4599 transcriptional regulator, fis family; GntR family transcriptional regulator 1609852 5746995 Daci_1440 Delftia acidovorans SPH-1 GntR family transcriptional regulator YP_001562469.1 1609106 D 398578 CDS YP_001562470.1 160896888 5746996 complement(1609849..1611705) 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_2089 ABC transporter related; ABC transporter-like protein 1611705 5746996 Daci_1441 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001562470.1 1609849 R 398578 CDS YP_001562471.1 160896889 5746997 complement(1612013..1612930) 1 NC_010002.1 TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: aav:Aave_4297 cysteine synthase A; cysteine synthase 1612930 5746997 Daci_1442 Delftia acidovorans SPH-1 cysteine synthase YP_001562471.1 1612013 R 398578 CDS YP_001562472.1 160896890 5746998 1613071..1614006 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_4170 transcriptional regulator, LysR family; LysR family transcriptional regulator 1614006 5746998 Daci_1443 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001562472.1 1613071 D 398578 CDS YP_001562473.1 160896891 5746999 complement(1614027..1615397) 1 NC_010002.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 1615397 5746999 Daci_1444 Delftia acidovorans SPH-1 amidase YP_001562473.1 1614027 R 398578 CDS YP_001562474.1 160896892 5747000 complement(1615448..1616125) 1 NC_010002.1 KEGG: bbr:BB2999 hypothetical protein; hypothetical protein 1616125 5747000 Daci_1445 Delftia acidovorans SPH-1 hypothetical protein YP_001562474.1 1615448 R 398578 CDS YP_001562475.1 160896893 5747001 complement(1616213..1617532) 1 NC_010002.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: rme:Rmet_1926 major facilitator superfamily MFS_1; major facilitator transporter 1617532 5747001 Daci_1446 Delftia acidovorans SPH-1 major facilitator transporter YP_001562475.1 1616213 R 398578 CDS YP_001562476.1 160896894 5747002 complement(1617806..1618705) 1 NC_010002.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: pen:PSEEN4902 hypothetical protein; hypothetical protein 1618705 5747002 Daci_1447 Delftia acidovorans SPH-1 hypothetical protein YP_001562476.1 1617806 R 398578 CDS YP_001562477.1 160896895 5747003 1618907..1619680 1 NC_010002.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: pau:PA14_55730 putative transcriptional regulator, AraC family; AraC family transcriptional regulator 1619680 5747003 Daci_1448 Delftia acidovorans SPH-1 AraC family transcriptional regulator YP_001562477.1 1618907 D 398578 CDS YP_001562478.1 160896896 5747005 complement(1620214..1622682) 1 NC_010002.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: psp:PSPPH_1870 outer membrane ferripyoverdine receptor; TonB-dependent siderophore receptor 1622682 5747005 Daci_1449 Delftia acidovorans SPH-1 TonB-dependent siderophore receptor YP_001562478.1 1620214 R 398578 CDS YP_001562479.1 160896897 5747006 complement(1622837..1624159) 1 NC_010002.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: FecR protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: pen:PSEEN1038 FecR-like transmembrane sensor; anti-FecI sigma factor FecR 1624159 5747006 Daci_1450 Delftia acidovorans SPH-1 anti-FecI sigma factor FecR YP_001562479.1 1622837 R 398578 CDS YP_001562480.1 160896898 5747007 complement(1624255..1624998) 1 NC_010002.1 PFAM: RNA-binding S4 domain protein; KEGG: aav:Aave_0792 RNA-binding S4 domain protein; RNA-binding S4 domain-containing protein 1624998 5747007 Daci_1451 Delftia acidovorans SPH-1 RNA-binding S4 domain-containing protein YP_001562480.1 1624255 R 398578 CDS YP_001562481.1 160896899 5747008 complement(1625052..1626722) 1 NC_010002.1 PFAM: NUDIX hydrolase; beta-lactamase domain protein; KEGG: aav:Aave_0793 beta-lactamase domain protein; beta-lactamase domain-containing protein 1626722 5747008 Daci_1452 Delftia acidovorans SPH-1 beta-lactamase domain-containing protein YP_001562481.1 1625052 R 398578 CDS YP_001562482.1 160896900 5747009 1626838..1627698 1 NC_010002.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 1627698 dapF 5747009 dapF Delftia acidovorans SPH-1 diaminopimelate epimerase YP_001562482.1 1626838 D 398578 CDS YP_001562483.1 160896901 5747010 1627695..1628408 1 NC_010002.1 PFAM: protein of unknown function DUF484; KEGG: ajs:Ajs_3687 protein of unknown function DUF484; hypothetical protein 1628408 5747010 Daci_1454 Delftia acidovorans SPH-1 hypothetical protein YP_001562483.1 1627695 D 398578 CDS YP_001562484.1 160896902 5747011 1628423..1629520 1 NC_010002.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: aav:Aave_0801 phage integrase family protein; integrase family protein 1629520 5747011 Daci_1455 Delftia acidovorans SPH-1 integrase family protein YP_001562484.1 1628423 D 398578 CDS YP_001562485.1 160896903 5747012 1629616..1630770 1 NC_010002.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: ajs:Ajs_3684 cobalamin synthesis protein, P47K; cobalamin synthesis protein P47K 1630770 5747012 Daci_1456 Delftia acidovorans SPH-1 cobalamin synthesis protein P47K YP_001562485.1 1629616 D 398578 CDS YP_001562486.1 160896904 5747013 1631302..1631796 1 NC_010002.1 TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: ajs:Ajs_3683 transcriptional regulator, TraR/DksA family; TraR/DksA family transcriptional regulator 1631796 5747013 Daci_1457 Delftia acidovorans SPH-1 TraR/DksA family transcriptional regulator YP_001562486.1 1631302 D 398578 CDS YP_001562487.1 160896905 5747014 1631842..1633623 1 NC_010002.1 KEGG: vei:Veis_4558 hypothetical protein; hypothetical protein 1633623 5747014 Daci_1458 Delftia acidovorans SPH-1 hypothetical protein YP_001562487.1 1631842 D 398578 CDS YP_001562488.1 160896906 5747015 1633748..1634293 1 NC_010002.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 1634293 5747015 Daci_1459 Delftia acidovorans SPH-1 ATP-dependent protease peptidase subunit YP_001562488.1 1633748 D 398578 CDS YP_001562489.1 160896907 5747016 1634393..1635730 1 NC_010002.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 1635730 hslU 5747016 hslU Delftia acidovorans SPH-1 ATP-dependent protease ATP-binding subunit HslU YP_001562489.1 1634393 D 398578 CDS YP_001562490.1 160896908 5747017 1636099..1636527 1 NC_010002.1 MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 1636527 5747017 Daci_1461 Delftia acidovorans SPH-1 cell division protein MraZ YP_001562490.1 1636099 D 398578 CDS YP_001562491.1 160896909 5747018 1636543..1637472 1 NC_010002.1 TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: aav:Aave_0813 S-adenosyl-methyltransferase MraW; S-adenosyl-methyltransferase MraW 1637472 mraW 5747018 mraW Delftia acidovorans SPH-1 S-adenosyl-methyltransferase MraW YP_001562491.1 1636543 D 398578 CDS YP_001562492.1 160896910 5747019 1637510..1637794 1 NC_010002.1 PFAM: cell division protein FtsL; KEGG: ajs:Ajs_3677 cell division protein FtsL; cell division protein FtsL 1637794 5747019 Daci_1463 Delftia acidovorans SPH-1 cell division protein FtsL YP_001562492.1 1637510 D 398578 CDS YP_001562493.1 160896911 5747020 1637791..1639539 1 NC_010002.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: ajs:Ajs_3676 peptidoglycan glycosyltransferase; peptidoglycan glycosyltransferase 1639539 5747020 Daci_1464 Delftia acidovorans SPH-1 peptidoglycan glycosyltransferase YP_001562493.1 1637791 D 398578 CDS YP_001562494.1 160896912 5747021 1639536..1641065 1 NC_010002.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 1641065 murE 5747021 murE Delftia acidovorans SPH-1 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_001562494.1 1639536 D 398578 CDS YP_001562495.1 160896913 5747022 1641062..1642477 1 NC_010002.1 TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: ajs:Ajs_3674 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase 1642477 5747022 Daci_1466 Delftia acidovorans SPH-1 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase YP_001562495.1 1641062 D 398578 CDS YP_001562496.1 160896914 5747023 1642468..1643646 1 NC_010002.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 1643646 mraY 5747023 mraY Delftia acidovorans SPH-1 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_001562496.1 1642468 D 398578 CDS YP_001562497.1 160896915 5747024 1643651..1645603 1 NC_010002.1 TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: aav:Aave_0819 UDP-N-acetylmuramoylalanine--D-glutamate ligase; UDP-N-acetylmuramoylalanine--D-glutamate ligase 1645603 5747024 Daci_1468 Delftia acidovorans SPH-1 UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_001562497.1 1643651 D 398578 CDS YP_001562498.1 160896916 5747025 1645600..1646865 1 NC_010002.1 TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: ajs:Ajs_3671 cell division protein FtsW; cell division protein FtsW 1646865 5747025 Daci_1469 Delftia acidovorans SPH-1 cell division protein FtsW YP_001562498.1 1645600 D 398578 CDS YP_001562499.1 160896917 5747026 1646862..1647956 1 NC_010002.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 1647956 murG 5747026 murG Delftia acidovorans SPH-1 undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase YP_001562499.1 1646862 D 398578 CDS YP_001562500.1 160896918 5747027 1647953..1649386 1 NC_010002.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 1649386 murC 5747027 murC Delftia acidovorans SPH-1 UDP-N-acetylmuramate--L-alanine ligase YP_001562500.1 1647953 D 398578 CDS YP_001562501.1 160896919 5747028 1649383..1650363 1 NC_010002.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase 1650363 ddl 5747028 ddl Delftia acidovorans SPH-1 D-alanine--D-alanine ligase YP_001562501.1 1649383 D 398578 CDS YP_001562502.1 160896920 5747029 1650360..1651160 1 NC_010002.1 PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein FtsQ-type; KEGG: vei:Veis_4573 polypeptide-transport-associated domain protein, FtsQ-type; polypeptide-transport-associated domain-containing protein 1651160 5747029 Daci_1473 Delftia acidovorans SPH-1 polypeptide-transport-associated domain-containing protein YP_001562502.1 1650360 D 398578 CDS YP_001562503.1 160896921 5747030 1651245..1652474 1 NC_010002.1 PFAM: cell division protein FtsA; KEGG: ajs:Ajs_3666 cell division protein FtsA; cell division protein FtsA 1652474 5747030 Daci_1474 Delftia acidovorans SPH-1 cell division protein FtsA YP_001562503.1 1651245 D 398578 CDS YP_001562504.1 160896922 5747031 1652594..1653832 1 NC_010002.1 TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ domain protein; KEGG: aav:Aave_0826 cell division protein FtsZ; cell division protein FtsZ 1653832 5747031 Daci_1475 Delftia acidovorans SPH-1 cell division protein FtsZ YP_001562504.1 1652594 D 398578 CDS YP_001562505.1 160896923 5747032 1653926..1654849 1 NC_010002.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 1654849 lpxC 5747032 lpxC Delftia acidovorans SPH-1 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase YP_001562505.1 1653926 D 398578 CDS YP_001562506.1 160896924 5747033 1654863..1655039 1 NC_010002.1 KEGG: pol:Bpro_1082 hypothetical protein; hypothetical protein 1655039 5747033 Daci_1477 Delftia acidovorans SPH-1 hypothetical protein YP_001562506.1 1654863 D 398578 CDS YP_001562507.1 160896925 5747034 1655435..1656742 1 NC_010002.1 KEGG: mca:MCA0115 oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; coproporphyrinogen dehydrogenase 1656742 5747034 Daci_1478 Delftia acidovorans SPH-1 coproporphyrinogen dehydrogenase YP_001562507.1 1655435 D 398578 CDS YP_001562508.1 160896926 5747035 1656749..1657678 1 NC_010002.1 PFAM: alpha/beta hydrolase fold; KEGG: pcr:Pcryo_2203 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 1657678 5747035 Daci_1479 Delftia acidovorans SPH-1 alpha/beta hydrolase fold protein YP_001562508.1 1656749 D 398578 CDS YP_001562509.1 160896927 5747036 complement(1657654..1658202) 1 NC_010002.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 1658202 ruvC 5747036 ruvC Delftia acidovorans SPH-1 Holliday junction resolvase YP_001562509.1 1657654 R 398578 CDS YP_001562510.1 160896928 5747037 complement(1658220..1658936) 1 NC_010002.1 TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: glycosyl transferase family 51; KEGG: aav:Aave_0840 monofunctional biosynthetic peptidoglycan transglycosylase; monofunctional biosynthetic peptidoglycan transglycosylase 1658936 5747037 Daci_1481 Delftia acidovorans SPH-1 monofunctional biosynthetic peptidoglycan transglycosylase YP_001562510.1 1658220 R 398578 CDS YP_001562511.1 160896929 5747038 complement(1658944..1659801) 1 NC_010002.1 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 1659801 aroE 5747038 aroE Delftia acidovorans SPH-1 shikimate 5-dehydrogenase YP_001562511.1 1658944 R 398578 CDS YP_001562512.1 160896930 5747039 complement(1659840..1660703) 1 NC_010002.1 TIGRFAM: TonB family protein; KEGG: ajs:Ajs_3655 TonB family protein; TonB family protein 1660703 5747039 Daci_1483 Delftia acidovorans SPH-1 TonB family protein YP_001562512.1 1659840 R 398578 CDS YP_001562513.1 160896931 5747040 complement(1660740..1662818) 1 NC_010002.1 PFAM: ribonuclease II; KEGG: aav:Aave_0843 ribonuclease II; ribonuclease II 1662818 5747040 Daci_1484 Delftia acidovorans SPH-1 ribonuclease II YP_001562513.1 1660740 R 398578 CDS YP_001562514.1 160896932 5747041 complement(1662874..1663458) 1 NC_010002.1 PFAM: protein of unknown function UPF0227; KEGG: ajs:Ajs_3649 protein of unknown function UPF0227; hypothetical protein 1663458 5747041 Daci_1485 Delftia acidovorans SPH-1 hypothetical protein YP_001562514.1 1662874 R 398578 CDS YP_001562515.1 160896933 5747042 1663671..1664840 1 NC_010002.1 TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: ajs:Ajs_3647 rod shape-determining protein RodA; rod shape-determining protein RodA 1664840 5747042 Daci_1486 Delftia acidovorans SPH-1 rod shape-determining protein RodA YP_001562515.1 1663671 D 398578 CDS YP_001562516.1 160896934 5747043 1665193..1666653 1 NC_010002.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: ajs:Ajs_3646 peptidase U62, modulator of DNA gyrase; peptidase U62 modulator of DNA gyrase 1666653 5747043 Daci_1487 Delftia acidovorans SPH-1 peptidase U62 modulator of DNA gyrase YP_001562516.1 1665193 D 398578 CDS YP_001562517.1 160896935 5747044 1667808..1668965 1 NC_010002.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 1668965 5747044 Daci_1488 Delftia acidovorans SPH-1 phospho-2-dehydro-3-deoxyheptonate aldolase YP_001562517.1 1667808 D 398578 CDS YP_001562518.1 160896936 5747045 complement(1669024..1669422) 1 NC_010002.1 PFAM: protein of unknown function DUF446; KEGG: shm:Shewmr7_2718 protein of unknown function DUF446; hypothetical protein 1669422 5747045 Daci_1489 Delftia acidovorans SPH-1 hypothetical protein YP_001562518.1 1669024 R 398578 CDS YP_001562519.1 160896937 5747046 1669652..1669969 1 NC_010002.1 KEGG: aav:Aave_0853 hypothetical protein; hypothetical protein 1669969 5747046 Daci_1490 Delftia acidovorans SPH-1 hypothetical protein YP_001562519.1 1669652 D 398578 CDS YP_001562520.1 160896938 5747047 complement(1670044..1671483) 1 NC_010002.1 TIGRFAM: UDP-N-acetylmuramate; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: aav:Aave_0854 UDP-N-acetylmuramate; UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 1671483 5747047 Daci_1491 Delftia acidovorans SPH-1 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase YP_001562520.1 1670044 R 398578 CDS YP_001562521.1 160896939 5747048 1671773..1672336 1 NC_010002.1 KEGG: aav:Aave_0855 hypothetical protein; hypothetical protein 1672336 5747048 Daci_1492 Delftia acidovorans SPH-1 hypothetical protein YP_001562521.1 1671773 D 398578 CDS YP_001562522.1 160896940 5747049 1672311..1672883 1 NC_010002.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: aav:Aave_0856 redoxin domain protein; redoxin domain-containing protein 1672883 5747049 Daci_1493 Delftia acidovorans SPH-1 redoxin domain-containing protein YP_001562522.1 1672311 D 398578 CDS YP_001562523.1 160896941 5747050 1673029..1673493 1 NC_010002.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: ajs:Ajs_3639 acetyl-CoA carboxylase, biotin carboxyl carrier protein; acetyl-CoA carboxylase, biotin carboxyl carrier protein 1673493 5747050 Daci_1494 Delftia acidovorans SPH-1 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_001562523.1 1673029 D 398578 CDS YP_001562524.1 160896942 5747051 1673626..1674990 1 NC_010002.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: ajs:Ajs_3638 acetyl-CoA carboxylase, biotin carboxylase; acetyl-CoA carboxylase, biotin carboxylase 1674990 5747051 Daci_1495 Delftia acidovorans SPH-1 acetyl-CoA carboxylase, biotin carboxylase YP_001562524.1 1673626 D 398578 CDS YP_001562525.1 160896943 5747052 1675075..1675965 1 NC_010002.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; 50S ribosomal protein L11 methyltransferase 1675965 prmA 5747052 prmA Delftia acidovorans SPH-1 50S ribosomal protein L11 methyltransferase YP_001562525.1 1675075 D 398578 CDS YP_001562526.1 160896944 5747053 1676041..1677468 1 NC_010002.1 TIGRFAM: MJ0042 family finger-like protein; KEGG: aav:Aave_0860 MJ0042 family finger-like protein; Zinc finger-domain-containing protein 1677468 5747053 Daci_1497 Delftia acidovorans SPH-1 Zinc finger-domain-containing protein YP_001562526.1 1676041 D 398578 CDS YP_001562527.1 160896945 5747054 1677504..1678406 1 NC_010002.1 PFAM: PfkB domain protein; KEGG: ajs:Ajs_3635 PfkB domain protein; ribokinase-like domain-containing protein 1678406 5747054 Daci_1498 Delftia acidovorans SPH-1 ribokinase-like domain-containing protein YP_001562527.1 1677504 D 398578 CDS YP_001562528.1 160896946 5747055 complement(1678504..1679460) 1 NC_010002.1 KEGG: aav:Aave_0862 histone protein; hypothetical protein 1679460 5747055 Daci_1499 Delftia acidovorans SPH-1 hypothetical protein YP_001562528.1 1678504 R 398578 CDS YP_001562529.1 160896947 5747056 complement(1679638..1680729) 1 NC_010002.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit beta 1680729 5747056 Daci_1500 Delftia acidovorans SPH-1 ribonucleotide-diphosphate reductase subunit beta YP_001562529.1 1679638 R 398578 CDS YP_001562530.1 160896948 5747057 complement(1680936..1683857) 1 NC_010002.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 1683857 5747057 Daci_1501 Delftia acidovorans SPH-1 ribonucleotide-diphosphate reductase subunit alpha YP_001562530.1 1680936 R 398578 CDS YP_001562531.1 160896949 5747058 complement(1684388..1685023) 1 NC_010002.1 PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: aav:Aave_0865 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; N-acetyl-anhydromuranmyl-L-alanine amidase 1685023 5747058 Daci_1502 Delftia acidovorans SPH-1 N-acetyl-anhydromuranmyl-L-alanine amidase YP_001562531.1 1684388 R 398578 CDS YP_001562532.1 160896950 5747059 complement(1685010..1686551) 1 NC_010002.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: aav:Aave_0866 two component, sigma54 specific, transcriptional regulator, fis family; Fis family two component sigma-54-specific transcriptional regulator 1686551 5747059 Daci_1503 Delftia acidovorans SPH-1 Fis family two component sigma-54-specific transcriptional regulator YP_001562532.1 1685010 R 398578 CDS YP_001562533.1 160896951 5747060 complement(1686551..1688314) 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: aav:Aave_0867 integral membrane sensor signal transduction histidine kinase; histidine kinase 1688314 5747060 Daci_1504 Delftia acidovorans SPH-1 histidine kinase YP_001562533.1 1686551 R 398578 CDS YP_001562534.1 160896952 5747061 complement(1688317..1688577) 1 NC_010002.1 KEGG: ajs:Ajs_3628 hypothetical protein; hypothetical protein 1688577 5747061 Daci_1505 Delftia acidovorans SPH-1 hypothetical protein YP_001562534.1 1688317 R 398578 CDS YP_001562535.1 160896953 5747062 complement(1688574..1689389) 1 NC_010002.1 PFAM: cytochrome c assembly protein; KEGG: ajs:Ajs_3627 cytochrome c assembly protein; cytochrome c assembly protein 1689389 5747062 Daci_1506 Delftia acidovorans SPH-1 cytochrome c assembly protein YP_001562535.1 1688574 R 398578 CDS YP_001562536.1 160896954 5747063 complement(1689473..1690399) 1 NC_010002.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: azo:azo2403 probable two-component response regulator; response regulator receiver modulated diguanylate cyclase 1690399 5747063 Daci_1507 Delftia acidovorans SPH-1 response regulator receiver modulated diguanylate cyclase YP_001562536.1 1689473 R 398578 CDS YP_001562537.1 160896955 5747064 complement(1690392..1694303) 1 NC_010002.1 KEGG: mgm:Mmc1_3409 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor hybrid histidine kinase 1694303 5747064 Daci_1508 Delftia acidovorans SPH-1 multi-sensor hybrid histidine kinase YP_001562537.1 1690392 R 398578 CDS YP_001562538.1 160896956 5747065 1694561..1695955 1 NC_010002.1 KEGG: ajs:Ajs_3626 signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; signal recognition particle protein 1695955 5747065 Daci_1509 Delftia acidovorans SPH-1 signal recognition particle protein YP_001562538.1 1694561 D 398578 CDS YP_001562539.1 160896957 5747066 1696062..1696616 1 NC_010002.1 PFAM: NLP/P60 protein; KEGG: rme:Rmet_1972 NLP/P60; NLP/P60 protein 1696616 5747066 Daci_1510 Delftia acidovorans SPH-1 NLP/P60 protein YP_001562539.1 1696062 D 398578 CDS YP_001562540.1 160896958 5747067 1696697..1697101 1 NC_010002.1 KEGG: csa:Csal_0802 hypothetical protein; hypothetical protein 1697101 5747067 Daci_1511 Delftia acidovorans SPH-1 hypothetical protein YP_001562540.1 1696697 D 398578 CDS YP_001562541.1 160896959 5747068 complement(1697150..1697824) 1 NC_010002.1 KEGG: pfl:PFL_4494 hypothetical protein; hypothetical protein 1697824 5747068 Daci_1512 Delftia acidovorans SPH-1 hypothetical protein YP_001562541.1 1697150 R 398578 CDS YP_001562542.1 160896960 5747069 complement(1697821..1699092) 1 NC_010002.1 KEGG: pfl:PFL_4493 hypothetical protein; hypothetical protein 1699092 5747069 Daci_1513 Delftia acidovorans SPH-1 hypothetical protein YP_001562542.1 1697821 R 398578 CDS YP_001562543.1 160896961 5747070 complement(1699086..1701470) 1 NC_010002.1 KEGG: pfl:PFL_4492 hypothetical protein; hypothetical protein 1701470 5747070 Daci_1514 Delftia acidovorans SPH-1 hypothetical protein YP_001562543.1 1699086 R 398578 CDS YP_001562544.1 160896962 5747071 complement(1701578..1702906) 1 NC_010002.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 1702906 5747071 Daci_1515 Delftia acidovorans SPH-1 (dimethylallyl)adenosine tRNA methylthiotransferase YP_001562544.1 1701578 R 398578 CDS YP_001562545.1 160896963 5747072 complement(1703074..1703481) 1 NC_010002.1 KEGG: aav:Aave_0876 hypothetical protein; hypothetical protein 1703481 5747072 Daci_1516 Delftia acidovorans SPH-1 hypothetical protein YP_001562545.1 1703074 R 398578 CDS YP_001562546.1 160896964 5747073 complement(1703546..1704478) 1 NC_010002.1 TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: aav:Aave_3826 formate dehydrogenase family accessory protein FdhD; formate dehydrogenase family accessory protein FdhD 1704478 5747073 Daci_1517 Delftia acidovorans SPH-1 formate dehydrogenase family accessory protein FdhD YP_001562546.1 1703546 R 398578 CDS YP_001562547.1 160896965 5747074 complement(1704531..1705661) 1 NC_010002.1 KEGG: ajs:Ajs_3126 molybdate ABC transporter, ATPase subunit; TIGRFAM: molybdate ABC transporter, ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase; molybdate ABC transporter ATPase 1705661 5747074 Daci_1518 Delftia acidovorans SPH-1 molybdate ABC transporter ATPase YP_001562547.1 1704531 R 398578 CDS YP_001562548.1 160896966 5747075 complement(1705658..1706338) 1 NC_010002.1 TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_3125 molybdate ABC transporter, inner membrane subunit; molybdate ABC transporter inner membrane subunit 1706338 5747075 Daci_1519 Delftia acidovorans SPH-1 molybdate ABC transporter inner membrane subunit YP_001562548.1 1705658 R 398578 CDS YP_001562549.1 160896967 5747076 complement(1706490..1707308) 1 NC_010002.1 TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: ajs:Ajs_3124 molybdenum ABC transporter, periplasmic molybdate-binding protein; molybdenum ABC transporter periplasmic molybdate-binding protein 1707308 5747076 Daci_1520 Delftia acidovorans SPH-1 molybdenum ABC transporter periplasmic molybdate-binding protein YP_001562549.1 1706490 R 398578 CDS YP_001562550.1 160896968 5747077 1707346..1708182 1 NC_010002.1 PFAM: regulatory protein LysR; TOBE domain protein; KEGG: aav:Aave_2030 putative transcriptional regulator, ModE family; ModE family transcriptional regulator 1708182 5747077 Daci_1521 Delftia acidovorans SPH-1 ModE family transcriptional regulator YP_001562550.1 1707346 D 398578 CDS YP_001562551.1 160896969 5747078 1708382..1708657 1 NC_010002.1 hypothetical protein 1708657 5747078 Daci_1522 Delftia acidovorans SPH-1 hypothetical protein YP_001562551.1 1708382 D 398578 CDS YP_001562552.1 160896970 5747079 1708654..1709166 1 NC_010002.1 KEGG: aav:Aave_1558 hypothetical protein; hypothetical protein 1709166 5747079 Daci_1523 Delftia acidovorans SPH-1 hypothetical protein YP_001562552.1 1708654 D 398578 CDS YP_001562553.1 160896971 5747080 complement(1709261..1710736) 1 NC_010002.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: hiq:CGSHiGG_09170 transporter protein; major facilitator transporter 1710736 5747080 Daci_1524 Delftia acidovorans SPH-1 major facilitator transporter YP_001562553.1 1709261 R 398578 CDS YP_001562554.1 160896972 5747081 1711056..1712342 1 NC_010002.1 KEGG: aav:Aave_1925 putative iron-regulated protein; putative iron-regulated protein 1712342 5747081 Daci_1525 Delftia acidovorans SPH-1 putative iron-regulated protein YP_001562554.1 1711056 D 398578 CDS YP_001562555.1 160896973 5747082 1712447..1713958 1 NC_010002.1 PFAM: protein of unknown function DUF1111; KEGG: pna:Pnap_2562 protein of unknown function DUF1111; hypothetical protein 1713958 5747082 Daci_1526 Delftia acidovorans SPH-1 hypothetical protein YP_001562555.1 1712447 D 398578 CDS YP_001562556.1 160896974 5747083 1713958..1715043 1 NC_010002.1 KEGG: aav:Aave_1923 periplasmic lipoprotein-like protein; periplasmic lipoprotein-like protein 1715043 5747083 Daci_1527 Delftia acidovorans SPH-1 periplasmic lipoprotein-like protein YP_001562556.1 1713958 D 398578 CDS YP_001562557.1 160896975 5747084 1715027..1716229 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: mpt:Mpe_A1461 hypothetical protein; hypothetical protein 1716229 5747084 Daci_1528 Delftia acidovorans SPH-1 hypothetical protein YP_001562557.1 1715027 D 398578 CDS YP_001562558.1 160896976 5747086 complement(1716530..1717309) 1 NC_010002.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ajs:Ajs_3623 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 1717309 5747086 Daci_1529 Delftia acidovorans SPH-1 enoyl-CoA hydratase/isomerase YP_001562558.1 1716530 R 398578 CDS YP_001562559.1 160896977 5747087 complement(1717384..1719309) 1 NC_010002.1 PFAM: peptidase M61 domain protein; KEGG: ajs:Ajs_3622 peptidase M61 domain protein; peptidase M61 domain-containing protein 1719309 5747087 Daci_1530 Delftia acidovorans SPH-1 peptidase M61 domain-containing protein YP_001562559.1 1717384 R 398578 CDS YP_001562560.1 160896978 5747088 complement(1719439..1720257) 1 NC_010002.1 KEGG: ajs:Ajs_3621 thiol:disulfide interchange protein DsbC; thiol:disulfide interchange protein DsbC 1720257 5747088 Daci_1531 Delftia acidovorans SPH-1 thiol:disulfide interchange protein DsbC YP_001562560.1 1719439 R 398578 CDS YP_001562561.1 160896979 5747089 complement(1720302..1721570) 1 NC_010002.1 TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; KEGG: ajs:Ajs_3620 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase 1721570 5747089 Daci_1532 Delftia acidovorans SPH-1 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase YP_001562561.1 1720302 R 398578 CDS YP_001562562.1 160896980 5747090 1721621..1722487 1 NC_010002.1 PFAM: MOSC domain containing protein; MOSC domain protein beta barrel domain protein; KEGG: aav:Aave_0886 MOSC domain protein beta barrel domain protein; MOSC domain-containing protein 1722487 5747090 Daci_1533 Delftia acidovorans SPH-1 MOSC domain-containing protein YP_001562562.1 1721621 D 398578 CDS YP_001562563.1 160896981 5747091 1722557..1723651 1 NC_010002.1 TIGRFAM: GTP-binding protein YchF; PFAM: GTP-binding protein HSR1-related; Protein of unknown function DUF933; KEGG: ajs:Ajs_3618 GTP-binding protein YchF; GTP-binding protein YchF 1723651 5747091 Daci_1534 Delftia acidovorans SPH-1 GTP-binding protein YchF YP_001562563.1 1722557 D 398578 CDS YP_001562564.1 160896982 5747092 1723829..1724263 1 NC_010002.1 PFAM: protein of unknown function DUF1044; KEGG: plu:plu2130 hypothetical protein; hypothetical protein 1724263 5747092 Daci_1535 Delftia acidovorans SPH-1 hypothetical protein YP_001562564.1 1723829 D 398578 CDS YP_001562565.1 160896983 5747093 1724241..1724558 1 NC_010002.1 KEGG: plu:plu2131 putative transcriptional regulator; XRE family transcriptional regulator 1724558 5747093 Daci_1536 Delftia acidovorans SPH-1 XRE family transcriptional regulator YP_001562565.1 1724241 D 398578 CDS YP_001562566.1 160896984 5747094 1724592..1724936 1 NC_010002.1 KEGG: bpu:BPUM_2653 hypothetical protein; hypothetical protein 1724936 5747094 Daci_1537 Delftia acidovorans SPH-1 hypothetical protein YP_001562566.1 1724592 D 398578 CDS YP_001562567.1 160896985 5747095 1724942..1725820 1 NC_010002.1 hypothetical protein 1725820 5747095 Daci_1538 Delftia acidovorans SPH-1 hypothetical protein YP_001562567.1 1724942 D 398578 CDS YP_001562568.1 160896986 5747096 1726252..1727400 1 NC_010002.1 PFAM: protein of unknown function DUF1016; KEGG: gur:Gura_1011 protein of unknown function DUF1016; hypothetical protein 1727400 5747096 Daci_1539 Delftia acidovorans SPH-1 hypothetical protein YP_001562568.1 1726252 D 398578 CDS YP_001562569.1 160896987 5747097 1727515..1728549 1 NC_010002.1 KEGG: bbr:BB4287 hypothetical protein; hypothetical protein 1728549 5747097 Daci_1540 Delftia acidovorans SPH-1 hypothetical protein YP_001562569.1 1727515 D 398578 CDS YP_001562570.1 160896988 5747098 1728674..1729555 1 NC_010002.1 catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; nicotinate-nucleotide pyrophosphorylase 1729555 5747098 Daci_1541 Delftia acidovorans SPH-1 nicotinate-nucleotide pyrophosphorylase YP_001562570.1 1728674 D 398578 CDS YP_001562571.1 160896989 5747099 1729566..1730561 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: bbr:BB4285 hypothetical protein; hypothetical protein 1730561 5747099 Daci_1542 Delftia acidovorans SPH-1 hypothetical protein YP_001562571.1 1729566 D 398578 CDS YP_001562572.1 160896990 5747100 complement(1730589..1731371) 1 NC_010002.1 catalyzes the formation of acetoacetate from 3-hydroxybutyrate; 3-hydroxybutyrate dehydrogenase 1731371 5747100 Daci_1543 Delftia acidovorans SPH-1 3-hydroxybutyrate dehydrogenase YP_001562572.1 1730589 R 398578 CDS YP_001562573.1 160896991 5747101 complement(1731808..1732737) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pna:Pnap_1024 transcriptional regulator, LysR family; LysR family transcriptional regulator 1732737 5747101 Daci_1544 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001562573.1 1731808 R 398578 CDS YP_001562574.1 160896992 5747102 1732868..1734514 1 NC_010002.1 catalyzes the formation of benzaldehyde from benzoylformate; benzoylformate decarboxylase 1734514 5747102 Daci_1545 Delftia acidovorans SPH-1 benzoylformate decarboxylase YP_001562574.1 1732868 D 398578 CDS YP_001562575.1 160896993 5747103 1734543..1735481 1 NC_010002.1 KEGG: azo:azo2471 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein; 2-dehydropantoate 2-reductase 1735481 5747103 Daci_1546 Delftia acidovorans SPH-1 2-dehydropantoate 2-reductase YP_001562575.1 1734543 D 398578 CDS YP_001562576.1 160896994 5747104 1735524..1736498 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: pol:Bpro_4537 uncharacterized protein UPF0065; hypothetical protein 1736498 5747104 Daci_1547 Delftia acidovorans SPH-1 hypothetical protein YP_001562576.1 1735524 D 398578 CDS YP_001562577.1 160896995 5747105 1736569..1737567 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: pna:Pnap_1019 uncharacterized protein UPF0065; hypothetical protein 1737567 5747105 Daci_1548 Delftia acidovorans SPH-1 hypothetical protein YP_001562577.1 1736569 D 398578 CDS YP_001562578.1 160896996 5747106 1738015..1739223 1 NC_010002.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: xac:XAC2145 cation efflux system protein; RND family efflux transporter MFP subunit 1739223 5747106 Daci_1549 Delftia acidovorans SPH-1 RND family efflux transporter MFP subunit YP_001562578.1 1738015 D 398578 CDS YP_001562579.1 160896997 5747107 1739220..1742393 1 NC_010002.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: xcv:XCV2107 RND superfamily protein; CzcA family heavy metal efflux protein 1742393 5747107 Daci_1550 Delftia acidovorans SPH-1 CzcA family heavy metal efflux protein YP_001562579.1 1739220 D 398578 CDS YP_001562580.1 160896998 5747108 1742393..1743724 1 NC_010002.1 PFAM: outer membrane efflux protein; KEGG: bth:BT_4695 outer membrane efflux protein precursor; outer membrane efflux protein 1743724 5747108 Daci_1551 Delftia acidovorans SPH-1 outer membrane efflux protein YP_001562580.1 1742393 D 398578 CDS YP_001562581.1 160896999 5747109 1743910..1745058 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: xom:XOO_2258 nodulation protein; histidine kinase 1745058 5747109 Daci_1552 Delftia acidovorans SPH-1 histidine kinase YP_001562581.1 1743910 D 398578 CDS YP_001562582.1 160897000 5747110 1745051..1745689 1 NC_010002.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: xcv:XCV2104 two-component system response regulator; two component LuxR family transcriptional regulator 1745689 5747110 Daci_1553 Delftia acidovorans SPH-1 two component LuxR family transcriptional regulator YP_001562582.1 1745051 D 398578 CDS YP_001562583.1 160897001 5747111 complement(1745751..1747412) 1 NC_010002.1 PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: aav:Aave_0762 protein of unknown function DUF894, DitE; hypothetical protein 1747412 5747111 Daci_1554 Delftia acidovorans SPH-1 hypothetical protein YP_001562583.1 1745751 R 398578 CDS YP_001562584.1 160897002 5747112 complement(1747402..1747857) 1 NC_010002.1 PFAM: DoxX family protein; KEGG: cko:CKO_00429 hypothetical protein; DoxX family protein 1747857 5747112 Daci_1555 Delftia acidovorans SPH-1 DoxX family protein YP_001562584.1 1747402 R 398578 CDS YP_001562585.1 160897003 5747113 complement(1747869..1749767) 1 NC_010002.1 PFAM: Amidohydrolase 3; KEGG: cko:CKO_00430 hypothetical protein; amidohydrolase 3 1749767 5747113 Daci_1556 Delftia acidovorans SPH-1 amidohydrolase 3 YP_001562585.1 1747869 R 398578 CDS YP_001562586.1 160897004 5747114 complement(1749891..1750163) 1 NC_010002.1 PFAM: protein of unknown function DUF1427; KEGG: pau:PA14_29250 hypothetical protein; hypothetical protein 1750163 5747114 Daci_1557 Delftia acidovorans SPH-1 hypothetical protein YP_001562586.1 1749891 R 398578 CDS YP_001562587.1 160897005 5747115 complement(1750203..1750901) 1 NC_010002.1 PFAM: isochorismatase hydrolase; KEGG: smd:Smed_4075 isochorismatase hydrolase; isochorismatase hydrolase 1750901 5747115 Daci_1558 Delftia acidovorans SPH-1 isochorismatase hydrolase YP_001562587.1 1750203 R 398578 CDS YP_001562588.1 160897006 5747116 complement(1750971..1751675) 1 NC_010002.1 PFAM: Pirin domain protein; KEGG: cvi:CV_1283 hypothetical protein; pirin domain-containing protein 1751675 5747116 Daci_1559 Delftia acidovorans SPH-1 pirin domain-containing protein YP_001562588.1 1750971 R 398578 CDS YP_001562589.1 160897007 5747117 1751778..1752701 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: cvi:CV_1282 probable transcriptional regulator; LysR family transcriptional regulator 1752701 5747117 Daci_1560 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001562589.1 1751778 D 398578 CDS YP_001562590.1 160897008 5747118 complement(1752743..1753279) 1 NC_010002.1 KEGG: ajs:Ajs_3587 hypothetical protein; hypothetical protein 1753279 5747118 Daci_1561 Delftia acidovorans SPH-1 hypothetical protein YP_001562590.1 1752743 R 398578 CDS YP_001562591.1 160897009 5747119 1753373..1753987 1 NC_010002.1 KEGG: vei:Veis_3028 hypothetical protein; hypothetical protein 1753987 5747119 Daci_1562 Delftia acidovorans SPH-1 hypothetical protein YP_001562591.1 1753373 D 398578 CDS YP_001562592.1 160897010 5747120 1754131..1755201 1 NC_010002.1 TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; dihydroorotate dehydrogenase; KEGG: ajs:Ajs_3586 putative TIM-barrel protein, nifR3 family; NifR3 family TIM-barrel protein 1755201 5747120 Daci_1563 Delftia acidovorans SPH-1 NifR3 family TIM-barrel protein YP_001562592.1 1754131 D 398578 CDS YP_001562593.1 160897011 5747121 1755476..1757074 1 NC_010002.1 involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 1757074 purH 5747121 purH Delftia acidovorans SPH-1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_001562593.1 1755476 D 398578 CDS YP_001562594.1 160897012 5747122 1757074..1757613 1 NC_010002.1 PFAM: cytochrome c class I; KEGG: ajs:Ajs_3583 cytochrome c, class I; class I cytochrome c 1757613 5747122 Daci_1565 Delftia acidovorans SPH-1 class I cytochrome c YP_001562594.1 1757074 D 398578 CDS YP_001562595.1 160897013 5747123 1757616..1758215 1 NC_010002.1 KEGG: ade:Adeh_2154 DNA-3-methyladenine glycosylase I; TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase; DNA-3-methyladenine glycosylase I 1758215 5747123 Daci_1566 Delftia acidovorans SPH-1 DNA-3-methyladenine glycosylase I YP_001562595.1 1757616 D 398578 CDS YP_001562596.1 160897014 5747124 1758452..1759639 1 NC_010002.1 PFAM: Integrase catalytic region; KEGG: ppf:Pput_3520 integrase, catalytic region; integrase catalytic subunit 1759639 5747124 Daci_1567 Delftia acidovorans SPH-1 integrase catalytic subunit YP_001562596.1 1758452 D 398578 CDS YP_001562597.1 160897015 5747125 1760059..1760457 1 NC_010002.1 hypothetical protein 1760457 5747125 Daci_1568 Delftia acidovorans SPH-1 hypothetical protein YP_001562597.1 1760059 D 398578 CDS YP_001562598.1 160897016 5747126 complement(1760529..1761845) 1 NC_010002.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 1761845 5747126 Daci_1569 Delftia acidovorans SPH-1 glutamate-1-semialdehyde aminotransferase YP_001562598.1 1760529 R 398578 CDS YP_001562599.1 160897017 5747127 complement(1761906..1762862) 1 NC_010002.1 PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: aav:Aave_0899 phosphomethylpyrimidine kinase type-1; phosphomethylpyrimidine kinase type-1 1762862 5747127 Daci_1570 Delftia acidovorans SPH-1 phosphomethylpyrimidine kinase type-1 YP_001562599.1 1761906 R 398578 CDS YP_001562600.1 160897018 5747128 1762984..1763130 1 NC_010002.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: ajs:Ajs_3579 rubredoxin-type Fe(Cys)4 protein; rubredoxin-type Fe(Cys)4 protein 1763130 5747128 Daci_1571 Delftia acidovorans SPH-1 rubredoxin-type Fe(Cys)4 protein YP_001562600.1 1762984 D 398578 CDS YP_001562601.1 160897019 5747129 1763178..1763576 1 NC_010002.1 PFAM: response regulator receiver; KEGG: aav:Aave_0901 response regulator receiver protein; response regulator receiver protein 1763576 5747129 Daci_1572 Delftia acidovorans SPH-1 response regulator receiver protein YP_001562601.1 1763178 D 398578 CDS YP_001562602.1 160897020 5747130 1763576..1763941 1 NC_010002.1 PFAM: response regulator receiver; KEGG: ajs:Ajs_3577 response regulator receiver protein; response regulator receiver protein 1763941 5747130 Daci_1573 Delftia acidovorans SPH-1 response regulator receiver protein YP_001562602.1 1763576 D 398578 CDS YP_001562603.1 160897021 5747131 1763957..1764484 1 NC_010002.1 PFAM: CheW domain protein; KEGG: ajs:Ajs_3576 putative CheW protein; CheW protein 1764484 5747131 Daci_1574 Delftia acidovorans SPH-1 CheW protein YP_001562603.1 1763957 D 398578 CDS YP_001562604.1 160897022 5747132 1764503..1766752 1 NC_010002.1 PFAM: chemotaxis sensory transducer; KEGG: aav:Aave_0904 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1766752 5747132 Daci_1575 Delftia acidovorans SPH-1 methyl-accepting chemotaxis sensory transducer YP_001562604.1 1764503 D 398578 CDS YP_001562605.1 160897023 5747133 1766809..1773222 1 NC_010002.1 PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; KEGG: vei:Veis_3017 CheA signal transduction histidine kinases; CheA signal transduction histidine kinase 1773222 5747133 Daci_1576 Delftia acidovorans SPH-1 CheA signal transduction histidine kinase YP_001562605.1 1766809 D 398578 CDS YP_001562606.1 160897024 5747134 complement(1773286..1774767) 1 NC_010002.1 PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: aav:Aave_0906 deoxyribodipyrimidine photo-lyase; deoxyribodipyrimidine photo-lyase 1774767 5747134 Daci_1577 Delftia acidovorans SPH-1 deoxyribodipyrimidine photo-lyase YP_001562606.1 1773286 R 398578 CDS YP_001562607.1 160897025 5747135 1774792..1775391 1 NC_010002.1 PFAM: protein of unknown function DUF179; KEGG: ajs:Ajs_3573 protein of unknown function DUF179; hypothetical protein 1775391 5747135 Daci_1578 Delftia acidovorans SPH-1 hypothetical protein YP_001562607.1 1774792 D 398578 CDS YP_001562608.1 160897026 5747136 1775388..1775846 1 NC_010002.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 1775846 5747136 Daci_1579 Delftia acidovorans SPH-1 Holliday junction resolvase-like protein YP_001562608.1 1775388 D 398578 CDS YP_001562609.1 160897027 5747137 1775843..1776361 1 NC_010002.1 PFAM: phosphoribosyltransferase; KEGG: aav:Aave_0909 phosphoribosyltransferase; phosphoribosyltransferase 1776361 5747137 Daci_1580 Delftia acidovorans SPH-1 phosphoribosyltransferase YP_001562609.1 1775843 D 398578 CDS YP_001562610.1 160897028 5747138 1776364..1777326 1 NC_010002.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 1777326 pyrB 5747138 pyrB Delftia acidovorans SPH-1 aspartate carbamoyltransferase catalytic subunit YP_001562610.1 1776364 D 398578 CDS YP_001562611.1 160897029 5747139 1777571..1778866 1 NC_010002.1 PFAM: amidohydrolase; KEGG: ajs:Ajs_3569 amidohydrolase; amidohydrolase 1778866 5747139 Daci_1582 Delftia acidovorans SPH-1 amidohydrolase YP_001562611.1 1777571 D 398578 CDS YP_001562612.1 160897030 5747140 1778869..1779618 1 NC_010002.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: vei:Veis_1512 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 1779618 5747140 Daci_1583 Delftia acidovorans SPH-1 phospholipid/glycerol acyltransferase YP_001562612.1 1778869 D 398578 CDS YP_001562613.1 160897031 5747141 1779633..1780109 1 NC_010002.1 PFAM: GCN5-related N-acetyltransferase; KEGG: reh:H16_A2522 hypothetical protein; N-acetyltransferase GCN5 1780109 5747141 Daci_1584 Delftia acidovorans SPH-1 N-acetyltransferase GCN5 YP_001562613.1 1779633 D 398578 CDS YP_001562614.1 160897032 5747142 complement(1780136..1780522) 1 NC_010002.1 KEGG: rme:Rmet_2261 putative lipoprotein; putative lipoprotein 1780522 5747142 Daci_1585 Delftia acidovorans SPH-1 putative lipoprotein YP_001562614.1 1780136 R 398578 CDS YP_001562615.1 160897033 5747143 complement(1780560..1781192) 1 NC_010002.1 KEGG: aav:Aave_2928 hypothetical protein; hypothetical protein 1781192 5747143 Daci_1586 Delftia acidovorans SPH-1 hypothetical protein YP_001562615.1 1780560 R 398578 CDS YP_001562616.1 160897034 5747144 complement(1781189..1782568) 1 NC_010002.1 PFAM: Stage II sporulation E family protein; KEGG: rme:Rmet_2259 serine phosphatase; protein serine/threonine phosphatase 1782568 5747144 Daci_1587 Delftia acidovorans SPH-1 protein serine/threonine phosphatase YP_001562616.1 1781189 R 398578 CDS YP_001562617.1 160897035 5747145 complement(1782666..1783826) 1 NC_010002.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: aav:Aave_0913 ABC transporter-related protein; ABC transporter-like protein 1783826 5747145 Daci_1588 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001562617.1 1782666 R 398578 CDS YP_001562618.1 160897036 5747146 1783976..1785622 1 NC_010002.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_0914 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1785622 5747146 Daci_1589 Delftia acidovorans SPH-1 binding-protein-dependent transport system inner membrane protein YP_001562618.1 1783976 D 398578 CDS YP_001562619.1 160897037 5747147 1785680..1786588 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_A1362 transcriptional regulator, LysR-family; LysR family transcriptional regulator 1786588 5747147 Daci_1590 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001562619.1 1785680 D 398578 CDS YP_001562620.1 160897038 5747148 1786700..1788085 1 NC_010002.1 catalyzes the transformation of hydroxyatrazine to N-isopropylammelide and ethylamine in the atrazine degradation pathway.; hydroxydechloroatrazine ethylaminohydrolase 1788085 5747148 Daci_1591 Delftia acidovorans SPH-1 hydroxydechloroatrazine ethylaminohydrolase YP_001562620.1 1786700 D 398578 CDS YP_001562621.1 160897039 5747149 1788292..1789608 1 NC_010002.1 TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: rme:Rmet_3725 uracil-xanthine permease; xanthine permease 1789608 5747149 Daci_1592 Delftia acidovorans SPH-1 xanthine permease YP_001562621.1 1788292 D 398578 CDS YP_001562622.1 160897040 5747150 1789580..1790008 1 NC_010002.1 TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: ajs:Ajs_3564 arsenate reductase; arsenate reductase 1790008 5747150 Daci_1593 Delftia acidovorans SPH-1 arsenate reductase YP_001562622.1 1789580 D 398578 CDS YP_001562623.1 160897041 5747151 1790104..1791666 1 NC_010002.1 KEGG: aav:Aave_3965 protease Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do 1791666 5747151 Daci_1594 Delftia acidovorans SPH-1 protease Do YP_001562623.1 1790104 D 398578 CDS YP_001562624.1 160897042 5747152 1791975..1793498 1 NC_010002.1 PFAM: Dual specificity protein phosphatase; ABC transporter related; SMART: AAA ATPase; KEGG: pna:Pnap_0369 ABC transporter related; ABC transporter-like protein 1793498 5747152 Daci_1595 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001562624.1 1791975 D 398578 CDS YP_001562625.1 160897043 5747153 1793535..1793939 1 NC_010002.1 KEGG: pna:Pnap_0368 hypothetical protein; hypothetical protein 1793939 5747153 Daci_1596 Delftia acidovorans SPH-1 hypothetical protein YP_001562625.1 1793535 D 398578 CDS YP_001562626.1 160897044 5747154 1794000..1794674 1 NC_010002.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: aav:Aave_3964 two component transcriptional regulator, winged helix family; two component transcriptional regulator 1794674 5747154 Daci_1597 Delftia acidovorans SPH-1 two component transcriptional regulator YP_001562626.1 1794000 D 398578 CDS YP_001562627.1 160897045 5747155 1794671..1796134 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: aav:Aave_3963 integral membrane sensor signal transduction histidine kinase; histidine kinase 1796134 5747155 Daci_1598 Delftia acidovorans SPH-1 histidine kinase YP_001562627.1 1794671 D 398578 CDS YP_001562628.1 160897046 5747156 1796305..1797336 1 NC_010002.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: aha:AHA_2752 GGDEF domain protein; GAF sensor-containing diguanylate cyclase 1797336 5747156 Daci_1599 Delftia acidovorans SPH-1 GAF sensor-containing diguanylate cyclase YP_001562628.1 1796305 D 398578 CDS YP_001562629.1 160897047 5747157 complement(1797432..1799039) 1 NC_010002.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: ajs:Ajs_2152 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1799039 5747157 Daci_1600 Delftia acidovorans SPH-1 methyl-accepting chemotaxis sensory transducer YP_001562629.1 1797432 R 398578 CDS YP_001562630.1 160897048 5747158 1799470..1800060 1 NC_010002.1 KEGG: bch:Bcen2424_2187 hypothetical protein; hypothetical protein 1800060 5747158 Daci_1601 Delftia acidovorans SPH-1 hypothetical protein YP_001562630.1 1799470 D 398578 CDS YP_001562631.1 160897049 5747159 complement(1800083..1800895) 1 NC_010002.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bpe:BP2655 putative IclR-family regulatory protein; IclR family transcriptional regulator 1800895 5747159 Daci_1602 Delftia acidovorans SPH-1 IclR family transcriptional regulator YP_001562631.1 1800083 R 398578 CDS YP_001562632.1 160897050 5747160 1800913..1801926 1 NC_010002.1 PFAM: dihydrodipicolinate synthetase; KEGG: bbr:BB3070 probable dihydrodipicolinate synthase; dihydrodipicolinate synthetase 1801926 5747160 Daci_1603 Delftia acidovorans SPH-1 dihydrodipicolinate synthetase YP_001562632.1 1800913 D 398578 CDS YP_001562633.1 160897051 5747161 1801987..1802991 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: bbr:BB3069 hypothetical protein; hypothetical protein 1802991 5747161 Daci_1604 Delftia acidovorans SPH-1 hypothetical protein YP_001562633.1 1801987 D 398578 CDS YP_001562634.1 160897052 5747162 complement(1803028..1803252) 1 NC_010002.1 hypothetical protein 1803252 5747162 Daci_1605 Delftia acidovorans SPH-1 hypothetical protein YP_001562634.1 1803028 R 398578 CDS YP_001562635.1 160897053 5747163 complement(1803274..1803963) 1 NC_010002.1 PFAM: Glutathione S-transferase domain; KEGG: bur:Bcep18194_B2348 glutathione S-transferase-like; glutathione S-transferase domain-containing protein 1803963 5747163 Daci_1606 Delftia acidovorans SPH-1 glutathione S-transferase domain-containing protein YP_001562635.1 1803274 R 398578 CDS YP_001562636.1 160897054 5747164 complement(1803977..1804657) 1 NC_010002.1 hypothetical protein 1804657 5747164 Daci_1607 Delftia acidovorans SPH-1 hypothetical protein YP_001562636.1 1803977 R 398578 CDS YP_001562637.1 160897055 5747165 1804780..1805337 1 NC_010002.1 PFAM: helix-turn-helix domain protein; KEGG: cvi:CV_2150 probable transcriptional regulator; XRE family transcriptional regulator 1805337 5747165 Daci_1608 Delftia acidovorans SPH-1 XRE family transcriptional regulator YP_001562637.1 1804780 D 398578 CDS YP_001562638.1 160897056 5747166 complement(1805357..1806115) 1 NC_010002.1 KEGG: sil:SPO1406 hypothetical protein; hypothetical protein 1806115 5747166 Daci_1609 Delftia acidovorans SPH-1 hypothetical protein YP_001562638.1 1805357 R 398578 CDS YP_001562639.1 160897057 5747167 complement(1806125..1807606) 1 NC_010002.1 PFAM: tyrosinase; KEGG: sil:SPO1405 tyrosinase domain protein; tyrosinase 1807606 5747167 Daci_1610 Delftia acidovorans SPH-1 tyrosinase YP_001562639.1 1806125 R 398578 CDS YP_001562640.1 160897058 5747168 complement(1808094..1809221) 1 NC_010002.1 PFAM: integrase family protein; KEGG: bte:BTH_II0623 Bbp50; integrase family protein 1809221 5747168 Daci_1611 Delftia acidovorans SPH-1 integrase family protein YP_001562640.1 1808094 R 398578 CDS YP_001562641.1 160897059 5747169 complement(1809439..1809981) 1 NC_010002.1 hypothetical protein 1809981 5747169 Daci_1612 Delftia acidovorans SPH-1 hypothetical protein YP_001562641.1 1809439 R 398578 CDS YP_001562642.1 160897060 5747170 complement(1809978..1810997) 1 NC_010002.1 KEGG: spe:Spro_2032 hypothetical protein; hypothetical protein 1810997 5747170 Daci_1613 Delftia acidovorans SPH-1 hypothetical protein YP_001562642.1 1809978 R 398578 CDS YP_001562643.1 160897061 5747171 complement(1811291..1812109) 1 NC_010002.1 hypothetical protein 1812109 5747171 Daci_1614 Delftia acidovorans SPH-1 hypothetical protein YP_001562643.1 1811291 R 398578 CDS YP_001562644.1 160897062 5747172 complement(1812106..1812921) 1 NC_010002.1 hypothetical protein 1812921 5747172 Daci_1615 Delftia acidovorans SPH-1 hypothetical protein YP_001562644.1 1812106 R 398578 CDS YP_001562645.1 160897063 5747173 complement(1813003..1814121) 1 NC_010002.1 KEGG: stm:STM0902 hypothetical protein; hypothetical protein 1814121 5747173 Daci_1616 Delftia acidovorans SPH-1 hypothetical protein YP_001562645.1 1813003 R 398578 CDS YP_001562646.1 160897064 5747174 1814428..1814709 1 NC_010002.1 hypothetical protein 1814709 5747174 Daci_1617 Delftia acidovorans SPH-1 hypothetical protein YP_001562646.1 1814428 D 398578 CDS YP_001562647.1 160897065 5747175 complement(1814930..1815349) 1 NC_010002.1 hypothetical protein 1815349 5747175 Daci_1618 Delftia acidovorans SPH-1 hypothetical protein YP_001562647.1 1814930 R 398578 CDS YP_001562648.1 160897066 5747176 complement(1815479..1816192) 1 NC_010002.1 PFAM: peptidase S24 and S26 domain protein; KEGG: asa:ASA_3870 prophage transcriptional regulator; putative phage repressor 1816192 5747176 Daci_1619 Delftia acidovorans SPH-1 putative phage repressor YP_001562648.1 1815479 R 398578 CDS YP_001562649.1 160897067 5747177 1816275..1816529 1 NC_010002.1 PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 1816529 5747177 Daci_1620 Delftia acidovorans SPH-1 XRE family transcriptional regulator YP_001562649.1 1816275 D 398578 CDS YP_001562650.1 160897068 5747178 1816855..1817340 1 NC_010002.1 KEGG: aav:Aave_1756 transcriptional regulator CII, putative; transcriptional regulator CII 1817340 5747178 Daci_1621 Delftia acidovorans SPH-1 transcriptional regulator CII YP_001562650.1 1816855 D 398578 CDS YP_001562651.1 160897069 5747179 1817510..1818424 1 NC_010002.1 KEGG: smd:Smed_1667 MT-A70 family protein; hypothetical protein 1818424 5747179 Daci_1622 Delftia acidovorans SPH-1 hypothetical protein YP_001562651.1 1817510 D 398578 CDS YP_001562652.1 160897070 5747180 1818475..1819983 1 NC_010002.1 PFAM: helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: eba:ebA803 putative helicase; helicase domain-containing protein 1819983 5747180 Daci_1623 Delftia acidovorans SPH-1 helicase domain-containing protein YP_001562652.1 1818475 D 398578 CDS YP_001562653.1 160897071 5747181 1819980..1820909 1 NC_010002.1 PFAM: Primase 2; KEGG: bpl:BURPS1106A_0113 hypothetical protein; primase 2 1820909 5747181 Daci_1624 Delftia acidovorans SPH-1 primase 2 YP_001562653.1 1819980 D 398578 CDS YP_001562654.1 160897072 5747182 1821431..1822108 1 NC_010002.1 hypothetical protein 1822108 5747182 Daci_1625 Delftia acidovorans SPH-1 hypothetical protein YP_001562654.1 1821431 D 398578 CDS YP_001562655.1 160897073 5747183 complement(1822258..1822563) 1 NC_010002.1 hypothetical protein 1822563 5747183 Daci_1626 Delftia acidovorans SPH-1 hypothetical protein YP_001562655.1 1822258 R 398578 CDS YP_001562656.1 160897074 5747184 1823020..1823781 1 NC_010002.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: rsh:Rsph17029_3313 HNH endonuclease; HNH endonuclease 1823781 5747184 Daci_1627 Delftia acidovorans SPH-1 HNH endonuclease YP_001562656.1 1823020 D 398578 CDS YP_001562657.1 160897075 5747185 1823793..1824113 1 NC_010002.1 PFAM: transcriptional activator Ogr/delta; KEGG: bps:BPSL0138 hypothetical protein; transcriptional activator Ogr/delta 1824113 5747185 Daci_1628 Delftia acidovorans SPH-1 transcriptional activator Ogr/delta YP_001562657.1 1823793 D 398578 CDS YP_001562658.1 160897076 5747186 1824355..1824615 1 NC_010002.1 hypothetical protein 1824615 5747186 Daci_1629 Delftia acidovorans SPH-1 hypothetical protein YP_001562658.1 1824355 D 398578 CDS YP_001562659.1 160897077 5747187 1824841..1825278 1 NC_010002.1 KEGG: bbr:BB1691 phage-related hypothetical protein; hypothetical protein 1825278 5747187 Daci_1630 Delftia acidovorans SPH-1 hypothetical protein YP_001562659.1 1824841 D 398578 CDS YP_001562660.1 160897078 5747188 1825226..1826986 1 NC_010002.1 PFAM: Terminase; KEGG: bbr:BB1692 terminase; terminase 1826986 5747188 Daci_1631 Delftia acidovorans SPH-1 terminase YP_001562660.1 1825226 D 398578 CDS YP_001562661.1 160897079 5747189 1826983..1828272 1 NC_010002.1 TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein; KEGG: bbr:BB1693 portal protein; HK97 family phage portal protein 1828272 5747189 Daci_1632 Delftia acidovorans SPH-1 HK97 family phage portal protein YP_001562661.1 1826983 D 398578 CDS YP_001562662.1 160897080 5747190 1828276..1829139 1 NC_010002.1 PFAM: peptidase S14 ClpP; KEGG: bbr:BB1694 phage-related Clp protease; peptidase S14 ClpP 1829139 5747190 Daci_1633 Delftia acidovorans SPH-1 peptidase S14 ClpP YP_001562662.1 1828276 D 398578 CDS YP_001562663.1 160897081 5747191 1829149..1830366 1 NC_010002.1 KEGG: bbr:BB1695 major head protein; major head protein 1830366 5747191 Daci_1634 Delftia acidovorans SPH-1 major head protein YP_001562663.1 1829149 D 398578 CDS YP_001562664.1 160897082 5747193 1831137..1831616 1 NC_010002.1 KEGG: ppu:PP_1569 hypothetical protein; hypothetical protein 1831616 5747193 Daci_1636 Delftia acidovorans SPH-1 hypothetical protein YP_001562664.1 1831137 D 398578 CDS YP_001562665.1 160897083 5747194 1831645..1831956 1 NC_010002.1 TIGRFAM: phage head-tail adaptor; PFAM: putative head-tail adaptor protein; KEGG: sit:TM1040_1063 hypothetical protein; phage head-tail adaptor 1831956 5747194 Daci_1637 Delftia acidovorans SPH-1 phage head-tail adaptor YP_001562665.1 1831645 D 398578 CDS YP_001562666.1 160897084 5747195 1831949..1832407 1 NC_010002.1 TIGRFAM: phage protein, HK97 gp10 family; PFAM: TP901-1 ORF40 family protein; KEGG: asu:Asuc_1243 phage protein, HK97 GP10 family; HK97 family phage protein 1832407 5747195 Daci_1638 Delftia acidovorans SPH-1 HK97 family phage protein YP_001562666.1 1831949 D 398578 CDS YP_001562667.1 160897085 5747196 1832404..1832787 1 NC_010002.1 hypothetical protein 1832787 5747196 Daci_1639 Delftia acidovorans SPH-1 hypothetical protein YP_001562667.1 1832404 D 398578 CDS YP_001562668.1 160897086 5747197 1832854..1833507 1 NC_010002.1 KEGG: asu:Asuc_1245 hypothetical protein; hypothetical protein 1833507 5747197 Daci_1640 Delftia acidovorans SPH-1 hypothetical protein YP_001562668.1 1832854 D 398578 CDS YP_001562669.1 160897087 5747198 1833504..1833866 1 NC_010002.1 hypothetical protein 1833866 5747198 Daci_1641 Delftia acidovorans SPH-1 hypothetical protein YP_001562669.1 1833504 D 398578 CDS YP_001562670.1 160897088 5747199 1833923..1834174 1 NC_010002.1 hypothetical protein 1834174 5747199 Daci_1642 Delftia acidovorans SPH-1 hypothetical protein YP_001562670.1 1833923 D 398578 CDS YP_001562671.1 160897089 5747200 1834176..1836650 1 NC_010002.1 KEGG: mms:mma_2779 uncharacterized conserved protein (possible phage related tail length tape measure protein); hypothetical protein 1836650 5747200 Daci_1643 Delftia acidovorans SPH-1 hypothetical protein YP_001562671.1 1834176 D 398578 CDS YP_001562672.1 160897090 5747201 1836654..1837268 1 NC_010002.1 KEGG: rsq:Rsph17025_3709 glycoside hydrolase, family 24; hypothetical protein 1837268 5747201 Daci_1644 Delftia acidovorans SPH-1 hypothetical protein YP_001562672.1 1836654 D 398578 CDS YP_001562673.1 160897091 5747202 1837270..1838202 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: nwi:Nwi_1179 hypothetical protein; hypothetical protein 1838202 5747202 Daci_1645 Delftia acidovorans SPH-1 hypothetical protein YP_001562673.1 1837270 D 398578 CDS YP_001562674.1 160897092 5747203 1838199..1838609 1 NC_010002.1 PFAM: NLP/P60 protein; KEGG: sit:TM1040_1071 putative phage cell wall peptidase, NlpC/P60; NLP/P60 protein 1838609 5747203 Daci_1646 Delftia acidovorans SPH-1 NLP/P60 protein YP_001562674.1 1838199 D 398578 CDS YP_001562675.1 160897093 5747204 1838957..1842331 1 NC_010002.1 KEGG: nwi:Nwi_0792 gene transfer agent (GTA) like protein; hypothetical protein 1842331 5747204 Daci_1647 Delftia acidovorans SPH-1 hypothetical protein YP_001562675.1 1838957 D 398578 CDS YP_001562676.1 160897094 5747205 1842328..1842999 1 NC_010002.1 KEGG: pmy:Pmen_3953 hypothetical protein; hypothetical protein 1842999 5747205 Daci_1648 Delftia acidovorans SPH-1 hypothetical protein YP_001562676.1 1842328 D 398578 CDS YP_001562677.1 160897095 5747206 1842996..1843703 1 NC_010002.1 hypothetical protein 1843703 5747206 Daci_1649 Delftia acidovorans SPH-1 hypothetical protein YP_001562677.1 1842996 D 398578 CDS YP_001562678.1 160897096 5747207 1843773..1844168 1 NC_010002.1 hypothetical protein 1844168 5747207 Daci_1650 Delftia acidovorans SPH-1 hypothetical protein YP_001562678.1 1843773 D 398578 CDS YP_001562679.1 160897097 5747208 1844195..1844464 1 NC_010002.1 hypothetical protein 1844464 5747208 Daci_1651 Delftia acidovorans SPH-1 hypothetical protein YP_001562679.1 1844195 D 398578 CDS YP_001562680.1 160897098 5747209 1844461..1844937 1 NC_010002.1 PFAM: protein of unknown function DUF847; KEGG: nmc:NMC1002 hypothetical protein; hypothetical protein 1844937 5747209 Daci_1652 Delftia acidovorans SPH-1 hypothetical protein YP_001562680.1 1844461 D 398578 CDS YP_001562681.1 160897099 5747210 1844934..1845299 1 NC_010002.1 KEGG: aav:Aave_1790 hypothetical protein; hypothetical protein 1845299 5747210 Daci_1653 Delftia acidovorans SPH-1 hypothetical protein YP_001562681.1 1844934 D 398578 CDS YP_001562682.1 160897100 5747211 1845296..1845580 1 NC_010002.1 KEGG: aav:Aave_1637 hypothetical protein; hypothetical protein 1845580 5747211 Daci_1654 Delftia acidovorans SPH-1 hypothetical protein YP_001562682.1 1845296 D 398578 CDS YP_001562683.1 160897101 5747212 1845577..1845855 1 NC_010002.1 KEGG: ajs:Ajs_2504 hypothetical protein; hypothetical protein 1845855 5747212 Daci_1655 Delftia acidovorans SPH-1 hypothetical protein YP_001562683.1 1845577 D 398578 CDS YP_001562684.1 160897102 5747213 1845852..1846121 1 NC_010002.1 KEGG: aav:Aave_2385 hypothetical protein; hypothetical protein 1846121 5747213 Daci_1656 Delftia acidovorans SPH-1 hypothetical protein YP_001562684.1 1845852 D 398578 CDS YP_001562685.1 160897103 5747215 complement(1846435..1850766) 1 NC_010002.1 PFAM: protein of unknown function DUF490; KEGG: aav:Aave_3956 protein of unknown function DUF490; hypothetical protein 1850766 5747215 Daci_1657 Delftia acidovorans SPH-1 hypothetical protein YP_001562685.1 1846435 R 398578 CDS YP_001562686.1 160897104 5747216 complement(1850769..1852691) 1 NC_010002.1 PFAM: surface antigen (D15); KEGG: aav:Aave_3955 surface antigen (D15); surface antigen (D15) 1852691 5747216 Daci_1658 Delftia acidovorans SPH-1 surface antigen (D15) YP_001562686.1 1850769 R 398578 CDS YP_001562687.1 160897105 5747217 complement(1852696..1853883) 1 NC_010002.1 KEGG: ajs:Ajs_3559 hypothetical protein; hypothetical protein 1853883 5747217 Daci_1659 Delftia acidovorans SPH-1 hypothetical protein YP_001562687.1 1852696 R 398578 CDS YP_001562688.1 160897106 5747218 complement(1853915..1854625) 1 NC_010002.1 KEGG: ajs:Ajs_3558 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1854625 5747218 Daci_1660 Delftia acidovorans SPH-1 N-acetyltransferase GCN5 YP_001562688.1 1853915 R 398578 CDS YP_001562689.1 160897107 5747219 complement(1854637..1855491) 1 NC_010002.1 PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: ajs:Ajs_3556 AAA ATPase, central domain protein; ATPase 1855491 5747219 Daci_1661 Delftia acidovorans SPH-1 ATPase YP_001562689.1 1854637 R 398578 CDS YP_001562690.1 160897108 5747220 1855608..1856282 1 NC_010002.1 PFAM: cytochrome c class I; KEGG: ajs:Ajs_3555 cytochrome c, class I; class I cytochrome c 1856282 5747220 Daci_1662 Delftia acidovorans SPH-1 class I cytochrome c YP_001562690.1 1855608 D 398578 CDS YP_001562691.1 160897109 5747221 complement(1856375..1856833) 1 NC_010002.1 PFAM: Domain of unknown function DUF1841; KEGG: aav:Aave_3950 hypothetical protein; hypothetical protein 1856833 5747221 Daci_1663 Delftia acidovorans SPH-1 hypothetical protein YP_001562691.1 1856375 R 398578 CDS YP_001562692.1 160897110 5747222 complement(1856912..1857511) 1 NC_010002.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: kpn:KPN_03412 hypothetical protein; short chain dehydrogenase 1857511 5747222 Daci_1664 Delftia acidovorans SPH-1 short chain dehydrogenase YP_001562692.1 1856912 R 398578 CDS YP_001562693.1 160897111 5747223 1857618..1858508 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc3332 probable transcription regulator protein; LysR family transcriptional regulator 1858508 5747223 Daci_1665 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001562693.1 1857618 D 398578 CDS YP_001562694.1 160897112 5747224 complement(1858519..1860402) 1 NC_010002.1 transport system that facilitates potassium-efflux; glutathione-regulated potassium-efflux system protein KefC 1860402 5747224 Daci_1666 Delftia acidovorans SPH-1 glutathione-regulated potassium-efflux system protein KefC YP_001562694.1 1858519 R 398578 CDS YP_001562695.1 160897113 5747225 1860700..1861329 1 NC_010002.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: ajs:Ajs_3544 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA 1861329 5747225 Daci_1667 Delftia acidovorans SPH-1 lysine exporter protein LysE/YggA YP_001562695.1 1860700 D 398578 CDS YP_001562696.1 160897114 5747226 1861551..1862135 1 NC_010002.1 PFAM: MaoC domain protein dehydratase; KEGG: aav:Aave_3913 MaoC domain protein dehydratase; dehydratase 1862135 5747226 Daci_1668 Delftia acidovorans SPH-1 dehydratase YP_001562696.1 1861551 D 398578 CDS YP_001562697.1 160897115 5747227 complement(1862290..1862595) 1 NC_010002.1 KEGG: aav:Aave_3912 hypothetical protein; hypothetical protein 1862595 5747227 Daci_1669 Delftia acidovorans SPH-1 hypothetical protein YP_001562697.1 1862290 R 398578 CDS YP_001562698.1 160897116 5747228 complement(1862779..1863276) 1 NC_010002.1 TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: ajs:Ajs_3541 tRNA/rRNA methyltransferase (SpoU); RNA methyltransferase 1863276 5747228 Daci_1670 Delftia acidovorans SPH-1 RNA methyltransferase YP_001562698.1 1862779 R 398578 CDS YP_001562699.1 160897117 5747229 complement(1863329..1864063) 1 NC_010002.1 KEGG: ajs:Ajs_3540 ComF family protein; ComF family protein 1864063 5747229 Daci_1671 Delftia acidovorans SPH-1 ComF family protein YP_001562699.1 1863329 R 398578 CDS YP_001562700.1 160897118 5747230 1864153..1865055 1 NC_010002.1 KEGG: aav:Aave_3908 biotin synthesis protein BioC; biotin synthesis protein BioC 1865055 5747230 Daci_1672 Delftia acidovorans SPH-1 biotin synthesis protein BioC YP_001562700.1 1864153 D 398578 CDS YP_001562701.1 160897119 5747231 1865352..1865642 1 NC_010002.1 hypothetical protein 1865642 5747231 Daci_1673 Delftia acidovorans SPH-1 hypothetical protein YP_001562701.1 1865352 D 398578 CDS YP_001562702.1 160897120 5747232 1865759..1866901 1 NC_010002.1 TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome c class I; cytochrome C oxidase subunit II transmembrane region; KEGG: ajs:Ajs_3537 cytochrome c oxidase, subunit II; cytochrome c oxidase subunit II 1866901 5747232 Daci_1674 Delftia acidovorans SPH-1 cytochrome c oxidase subunit II YP_001562702.1 1865759 D 398578 CDS YP_001562703.1 160897121 5747233 1866937..1868607 1 NC_010002.1 KEGG: aav:Aave_3906 cytochrome-c oxidase; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; cytochrome c oxidase subunit I 1868607 5747233 Daci_1675 Delftia acidovorans SPH-1 cytochrome c oxidase subunit I YP_001562703.1 1866937 D 398578 CDS YP_001562704.1 160897122 5747234 1868631..1868738 1 NC_010002.1 hypothetical protein 1868738 5747234 Daci_1676 Delftia acidovorans SPH-1 hypothetical protein YP_001562704.1 1868631 D 398578 CDS YP_001562705.1 160897123 5747235 1868790..1869383 1 NC_010002.1 involved in the insertion of copper into subunit I of cytochrome C oxidase; cytochrome C oxidase assembly protein 1869383 5747235 Daci_1677 Delftia acidovorans SPH-1 cytochrome C oxidase assembly protein YP_001562705.1 1868790 D 398578 CDS YP_001562706.1 160897124 5747236 1869380..1869592 1 NC_010002.1 KEGG: aav:Aave_3904 putative transmembrane protein; putative transmembrane protein 1869592 5747236 Daci_1678 Delftia acidovorans SPH-1 putative transmembrane protein YP_001562706.1 1869380 D 398578 CDS YP_001562707.1 160897125 5747237 1869663..1870544 1 NC_010002.1 PFAM: cytochrome c oxidase subunit III; KEGG: ajs:Ajs_3532 cytochrome c oxidase, subunit III; cytochrome c oxidase subunit III 1870544 5747237 Daci_1679 Delftia acidovorans SPH-1 cytochrome c oxidase subunit III YP_001562707.1 1869663 D 398578 CDS YP_001562708.1 160897126 5747238 complement(1870620..1870862) 1 NC_010002.1 KEGG: ajs:Ajs_3531 putative transmembrane protein; putative transmembrane protein 1870862 5747238 Daci_1680 Delftia acidovorans SPH-1 putative transmembrane protein YP_001562708.1 1870620 R 398578 CDS YP_001562709.1 160897127 5747239 1870892..1871665 1 NC_010002.1 KEGG: ajs:Ajs_3530 putative transmembrane cytochrome oxidase; putative transmembrane cytochrome oxidase 1871665 5747239 Daci_1681 Delftia acidovorans SPH-1 putative transmembrane cytochrome oxidase YP_001562709.1 1870892 D 398578 CDS YP_001562710.1 160897128 5747240 1871679..1872341 1 NC_010002.1 KEGG: ajs:Ajs_3529 hypothetical protein; hypothetical protein 1872341 5747240 Daci_1682 Delftia acidovorans SPH-1 hypothetical protein YP_001562710.1 1871679 D 398578 CDS YP_001562711.1 160897129 5747241 1872551..1873165 1 NC_010002.1 PFAM: electron transport protein SCO1/SenC; KEGG: aav:Aave_3898 electron transport protein SCO1/SenC; electron transport protein SCO1/SenC 1873165 5747241 Daci_1683 Delftia acidovorans SPH-1 electron transport protein SCO1/SenC YP_001562711.1 1872551 D 398578 CDS YP_001562712.1 160897130 5747242 1873327..1874904 1 NC_010002.1 TIGRFAM: PAS sensor protein; PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold domain protein; KEGG: yps:YPTB2424 putative methyl-accepting chemotaxis protein; Pas/Pac sensor-containing methyl-accepting chemotaxis sensory transducer 1874904 5747242 Daci_1684 Delftia acidovorans SPH-1 Pas/Pac sensor-containing methyl-accepting chemotaxis sensory transducer YP_001562712.1 1873327 D 398578 CDS YP_001562713.1 160897131 5747243 1874901..1876658 1 NC_010002.1 KEGG: ajs:Ajs_3525 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 1876658 5747243 Daci_1685 Delftia acidovorans SPH-1 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_001562713.1 1874901 D 398578 CDS YP_001562714.1 160897132 5747244 complement(1876687..1876983) 1 NC_010002.1 TIGRFAM: addiction module antidote protein; KEGG: noc:Noc_0569 transcriptional regulator, Cro/CI family; putative transcriptional regulator 1876983 5747244 Daci_1686 Delftia acidovorans SPH-1 putative transcriptional regulator YP_001562714.1 1876687 R 398578 CDS YP_001562715.1 160897133 5747245 complement(1876980..1877276) 1 NC_010002.1 TIGRFAM: addiction module killer protein; PFAM: protein of unknown function DUF891; KEGG: neu:NE1356 hypothetical protein; addiction module killer protein 1877276 5747245 Daci_1687 Delftia acidovorans SPH-1 addiction module killer protein YP_001562715.1 1876980 R 398578 CDS YP_001562716.1 160897134 5747246 complement(1877324..1878055) 1 NC_010002.1 KEGG: ajs:Ajs_3524 cyclic nucleotide-binding protein; cyclic nucleotide-binding protein 1878055 5747246 Daci_1688 Delftia acidovorans SPH-1 cyclic nucleotide-binding protein YP_001562716.1 1877324 R 398578 CDS YP_001562717.1 160897135 5747247 complement(1878243..1879220) 1 NC_010002.1 KEGG: bbr:BB0107 hypothetical protein; hypothetical protein 1879220 5747247 Daci_1689 Delftia acidovorans SPH-1 hypothetical protein YP_001562717.1 1878243 R 398578 CDS YP_001562718.1 160897136 5747248 complement(1879220..1881172) 1 NC_010002.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; this condensing enzyme differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 1881172 5747248 Daci_1690 Delftia acidovorans SPH-1 3-oxoacyl-ACP synthase YP_001562718.1 1879220 R 398578 CDS YP_001562719.1 160897137 5747249 complement(1881188..1882123) 1 NC_010002.1 PFAM: fatty acid desaturase; KEGG: bpe:BP3207 putative fatty acid desaturase; fatty acid desaturase 1882123 5747249 Daci_1691 Delftia acidovorans SPH-1 fatty acid desaturase YP_001562719.1 1881188 R 398578 CDS YP_001562720.1 160897138 5747250 complement(1882120..1882866) 1 NC_010002.1 PFAM: fatty acid hydroxylase; KEGG: bbr:BB0103 putative desaturase; fatty acid hydroxylase 1882866 5747250 Daci_1692 Delftia acidovorans SPH-1 fatty acid hydroxylase YP_001562720.1 1882120 R 398578 CDS YP_001562721.1 160897139 5747251 complement(1882886..1883911) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_3523 uncharacterized protein UPF0065; hypothetical protein 1883911 5747251 Daci_1693 Delftia acidovorans SPH-1 hypothetical protein YP_001562721.1 1882886 R 398578 CDS YP_001562722.1 160897140 5747252 complement(1883976..1884920) 1 NC_010002.1 TIGRFAM: RNA polymerase sigma factor RpoH; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; KEGG: aav:Aave_3894 RNA polymerase, sigma 32 subunit, RpoH; RNA polymerase sigma 32 subunit RpoH 1884920 5747252 Daci_1694 Delftia acidovorans SPH-1 RNA polymerase sigma 32 subunit RpoH YP_001562722.1 1883976 R 398578 CDS YP_001562723.1 160897141 5747253 complement(1886229..1886705) 1 NC_010002.1 KEGG: rfr:Rfer_3045 hypothetical protein; hypothetical protein 1886705 5747253 Daci_1695 Delftia acidovorans SPH-1 hypothetical protein YP_001562723.1 1886229 R 398578 CDS YP_001562724.1 160897142 5747254 complement(1887071..1887502) 1 NC_010002.1 hypothetical protein 1887502 5747254 Daci_1696 Delftia acidovorans SPH-1 hypothetical protein YP_001562724.1 1887071 R 398578 CDS YP_001562725.1 160897143 5747255 1887686..1888126 1 NC_010002.1 SMART: helix-turn-helix domain protein; KEGG: vei:Veis_0005 mobile mystery protein A; helix-turn-helix domain-containing protein 1888126 5747255 Daci_1697 Delftia acidovorans SPH-1 helix-turn-helix domain-containing protein YP_001562725.1 1887686 D 398578 CDS YP_001562726.1 160897144 5747256 complement(1888547..1889503) 1 NC_010002.1 KEGG: ret:RHE_CH00233 hypothetical protein; hypothetical protein 1889503 5747256 Daci_1698 Delftia acidovorans SPH-1 hypothetical protein YP_001562726.1 1888547 R 398578 CDS YP_001562727.1 160897145 5747257 complement(1889820..1890392) 1 NC_010002.1 hypothetical protein 1890392 5747257 Daci_1699 Delftia acidovorans SPH-1 hypothetical protein YP_001562727.1 1889820 R 398578 CDS YP_001562728.1 160897146 5747258 complement(1890487..1890957) 1 NC_010002.1 PFAM: helix-turn-helix domain protein; KEGG: ecs:ECs2620 putative transcriptional regulator; XRE family transcriptional regulator 1890957 5747258 Daci_1700 Delftia acidovorans SPH-1 XRE family transcriptional regulator YP_001562728.1 1890487 R 398578 CDS YP_001562729.1 160897147 5747259 1890992..1891282 1 NC_010002.1 KEGG: nha:Nham_1614 hypothetical protein; hypothetical protein 1891282 5747259 Daci_1701 Delftia acidovorans SPH-1 hypothetical protein YP_001562729.1 1890992 D 398578 CDS YP_001562730.1 160897148 5747260 1892059..1894011 1 NC_010002.1 KEGG: bch:Bcen2424_5218 integrase, catalytic region; hypothetical protein 1894011 5747260 Daci_1702 Delftia acidovorans SPH-1 hypothetical protein YP_001562730.1 1892059 D 398578 CDS YP_001562731.1 160897149 5747261 1894014..1894982 1 NC_010002.1 KEGG: ppf:Pput_0007 AAA ATPase; hypothetical protein 1894982 5747261 Daci_1703 Delftia acidovorans SPH-1 hypothetical protein YP_001562731.1 1894014 D 398578 CDS YP_001562732.1 160897150 5747262 1895590..1895946 1 NC_010002.1 hypothetical protein 1895946 5747262 Daci_1704 Delftia acidovorans SPH-1 hypothetical protein YP_001562732.1 1895590 D 398578 CDS YP_001562733.1 160897151 5747263 1896129..1896710 1 NC_010002.1 KEGG: bch:Bcen2424_5215 hypothetical protein; hypothetical protein 1896710 5747263 Daci_1705 Delftia acidovorans SPH-1 hypothetical protein YP_001562733.1 1896129 D 398578 CDS YP_001562734.1 160897152 5747264 1897162..1897746 1 NC_010002.1 KEGG: pna:Pnap_4834 hypothetical protein; hypothetical protein 1897746 5747264 Daci_1706 Delftia acidovorans SPH-1 hypothetical protein YP_001562734.1 1897162 D 398578 CDS YP_001562735.1 160897153 5747265 1898981..1899466 1 NC_010002.1 KEGG: ajs:Ajs_1875 hypothetical protein; hypothetical protein 1899466 5747265 Daci_1707 Delftia acidovorans SPH-1 hypothetical protein YP_001562735.1 1898981 D 398578 CDS YP_001562736.1 160897154 5747266 1899744..1900880 1 NC_010002.1 KEGG: sty:HCM2.0093c hypothetical protein; hypothetical protein 1900880 5747266 Daci_1708 Delftia acidovorans SPH-1 hypothetical protein YP_001562736.1 1899744 D 398578 CDS YP_001562737.1 160897155 5747267 1900992..1901318 1 NC_010002.1 KEGG: nha:Nham_4496 hypothetical protein; hypothetical protein 1901318 5747267 Daci_1709 Delftia acidovorans SPH-1 hypothetical protein YP_001562737.1 1900992 D 398578 CDS YP_001562738.1 160897156 5747268 complement(1901705..1901986) 1 NC_010002.1 PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: aav:Aave_1150 histone family protein nucleoid-structuring protein H-NS; histone family protein nucleoid-structuring protein H-NS 1901986 5747268 Daci_1710 Delftia acidovorans SPH-1 histone family protein nucleoid-structuring protein H-NS YP_001562738.1 1901705 R 398578 CDS YP_001562739.1 160897157 5747269 complement(1902189..1903844) 1 NC_010002.1 PFAM: sulfatase; KEGG: aav:Aave_4610 sulfatase; sulfatase 1903844 5747269 Daci_1711 Delftia acidovorans SPH-1 sulfatase YP_001562739.1 1902189 R 398578 CDS YP_001562740.1 160897158 5747270 complement(1903881..1905269) 1 NC_010002.1 TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mpt:Mpe_A1630 putative two-component sensor; heavy metal sensor signal transduction histidine kinase 1905269 5747270 Daci_1712 Delftia acidovorans SPH-1 heavy metal sensor signal transduction histidine kinase YP_001562740.1 1903881 R 398578 CDS YP_001562741.1 160897159 5747271 complement(1905266..1905949) 1 NC_010002.1 TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mpt:Mpe_A1629 two-component response regulator; two component heavy metal response transcriptional regulator 1905949 5747271 Daci_1713 Delftia acidovorans SPH-1 two component heavy metal response transcriptional regulator YP_001562741.1 1905266 R 398578 CDS YP_001562742.1 160897160 5747272 1906105..1907436 1 NC_010002.1 PFAM: outer membrane efflux protein; KEGG: tbd:Tbd_1329 probable cobalt-zinc-cadmium outer membrane resistance protein; outer membrane efflux protein 1907436 5747272 Daci_1714 Delftia acidovorans SPH-1 outer membrane efflux protein YP_001562742.1 1906105 D 398578 CDS YP_001562743.1 160897161 5747273 1907453..1908823 1 NC_010002.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mms:mma_1793 cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family; RND family efflux transporter MFP subunit 1908823 5747273 Daci_1715 Delftia acidovorans SPH-1 RND family efflux transporter MFP subunit YP_001562743.1 1907453 D 398578 CDS YP_001562744.1 160897162 5747274 1908844..1912032 1 NC_010002.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: ajs:Ajs_1849 heavy metal efflux pump, CzcA family; CzcA family heavy metal efflux protein 1912032 5747274 Daci_1716 Delftia acidovorans SPH-1 CzcA family heavy metal efflux protein YP_001562744.1 1908844 D 398578 CDS YP_001562745.1 160897163 5747275 1912221..1912571 1 NC_010002.1 KEGG: ajs:Ajs_2727 hypothetical protein; hypothetical protein 1912571 5747275 Daci_1717 Delftia acidovorans SPH-1 hypothetical protein YP_001562745.1 1912221 D 398578 CDS YP_001562746.1 160897164 5747276 1912670..1914436 1 NC_010002.1 PFAM: sulfatase; protein of unknown function DUF1705; KEGG: vei:Veis_4349 sulfatase; sulfatase 1914436 5747276 Daci_1718 Delftia acidovorans SPH-1 sulfatase YP_001562746.1 1912670 D 398578 CDS YP_001562747.1 160897165 5747277 1914538..1914927 1 NC_010002.1 TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: flagellar basal body rod protein; KEGG: mms:mma_1763 flagellar basal-body rod protein FlgB; flagellar basal-body rod protein FlgB 1914927 5747277 Daci_1719 Delftia acidovorans SPH-1 flagellar basal-body rod protein FlgB YP_001562747.1 1914538 D 398578 CDS YP_001562748.1 160897166 5747278 1914956..1915231 1 NC_010002.1 KEGG: sfr:Sfri_3475 hypothetical protein; hypothetical protein 1915231 5747278 Daci_1720 Delftia acidovorans SPH-1 hypothetical protein YP_001562748.1 1914956 D 398578 CDS YP_001562749.1 160897167 5747279 1915304..1917772 1 NC_010002.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: bbt:BBta_7296 cadmium-exporting ATPase; heavy metal translocating P-type ATPase 1917772 5747279 Daci_1721 Delftia acidovorans SPH-1 heavy metal translocating P-type ATPase YP_001562749.1 1915304 D 398578 CDS YP_001562750.1 160897168 5747280 1917869..1918630 1 NC_010002.1 KEGG: xcb:XC_3128 hypothetical protein; hypothetical protein 1918630 5747280 Daci_1722 Delftia acidovorans SPH-1 hypothetical protein YP_001562750.1 1917869 D 398578 CDS YP_001562751.1 160897169 5747281 1918605..1919018 1 NC_010002.1 PFAM: diacylglycerol kinase; KEGG: aav:Aave_3117 diacylglycerol kinase; diacylglycerol kinase 1919018 5747281 Daci_1723 Delftia acidovorans SPH-1 diacylglycerol kinase YP_001562751.1 1918605 D 398578 CDS YP_001562752.1 160897170 5747282 complement(1919063..1919389) 1 NC_010002.1 hypothetical protein 1919389 5747282 Daci_1724 Delftia acidovorans SPH-1 hypothetical protein YP_001562752.1 1919063 R 398578 CDS YP_001562753.1 160897171 5747283 complement(1919523..1920569) 1 NC_010002.1 KEGG: vei:Veis_4644 porin, gram-negative type; porin 1920569 5747283 Daci_1725 Delftia acidovorans SPH-1 porin YP_001562753.1 1919523 R 398578 CDS YP_001562754.1 160897172 5747284 complement(1921980..1922318) 1 NC_010002.1 KEGG: aav:Aave_3790 transposase, IS4 family protein; transposase, IS4 family protein 1922318 5747284 Daci_1726 Delftia acidovorans SPH-1 transposase, IS4 family protein YP_001562754.1 1921980 R 398578 CDS YP_001562755.1 160897173 5747285 complement(1922378..1922803) 1 NC_010002.1 KEGG: aav:Aave_3789 putative TIS1421-transposase orfA protein; putative TIS1421-transposase orfA protein 1922803 5747285 Daci_1727 Delftia acidovorans SPH-1 putative TIS1421-transposase orfA protein YP_001562755.1 1922378 R 398578 CDS YP_001562756.1 160897174 5747286 1922898..1923305 1 NC_010002.1 hypothetical protein 1923305 5747286 Daci_1728 Delftia acidovorans SPH-1 hypothetical protein YP_001562756.1 1922898 D 398578 CDS YP_001562757.1 160897175 5747287 1923320..1924051 1 NC_010002.1 PFAM: transcriptional regulator domain protein; KEGG: bbr:BB4471 two-component response regulator; winged helix family two component response transcriptional regulator 1924051 5747287 Daci_1729 Delftia acidovorans SPH-1 winged helix family two component response transcriptional regulator YP_001562757.1 1923320 D 398578 CDS YP_001562758.1 160897176 5747288 complement(1924184..1924567) 1 NC_010002.1 KEGG: aav:Aave_0797 chromate transporter, chromate ion transporter (CHR) family; hypothetical protein 1924567 5747288 Daci_1730 Delftia acidovorans SPH-1 hypothetical protein YP_001562758.1 1924184 R 398578 CDS YP_001562759.1 160897177 5747289 complement(1924663..1925076) 1 NC_010002.1 KEGG: psb:Psyr_1485 hypothetical protein; hypothetical protein 1925076 5747289 Daci_1731 Delftia acidovorans SPH-1 hypothetical protein YP_001562759.1 1924663 R 398578 CDS YP_001562760.1 160897178 5747290 complement(1925073..1926368) 1 NC_010002.1 PFAM: Chloride channel core; KEGG: psb:Psyr_1486 Cl-channel, voltage gated; chloride channel core 1926368 5747290 Daci_1732 Delftia acidovorans SPH-1 chloride channel core YP_001562760.1 1925073 R 398578 CDS YP_001562761.1 160897179 5747291 1926719..1926913 1 NC_010002.1 KEGG: aav:Aave_3789 putative TIS1421-transposase orfA protein; putative TIS1421-transposase orfA protein 1926913 5747291 Daci_1733 Delftia acidovorans SPH-1 putative TIS1421-transposase orfA protein YP_001562761.1 1926719 D 398578 CDS YP_001562762.1 160897180 5747292 1927084..1927506 1 NC_010002.1 KEGG: aav:Aave_3790 transposase, IS4 family protein; transposase, IS4 family protein 1927506 5747292 Daci_1734 Delftia acidovorans SPH-1 transposase, IS4 family protein YP_001562762.1 1927084 D 398578 CDS YP_001562763.1 160897181 5747293 1927503..1928957 1 NC_010002.1 SMART: AAA ATPase; KEGG: xac:XAC2215 hypothetical protein; ATPase AAA 1928957 5747293 Daci_1735 Delftia acidovorans SPH-1 ATPase AAA YP_001562763.1 1927503 D 398578 CDS YP_001562764.1 160897182 5747294 1929097..1929798 1 NC_010002.1 KEGG: xac:XAC2214 hypothetical protein; hypothetical protein 1929798 5747294 Daci_1736 Delftia acidovorans SPH-1 hypothetical protein YP_001562764.1 1929097 D 398578 CDS YP_001562765.1 160897183 5747295 complement(1930387..1931439) 1 NC_010002.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: reu:Reut_A1523 protein of unknown function DUF6, transmembrane; hypothetical protein 1931439 5747295 Daci_1737 Delftia acidovorans SPH-1 hypothetical protein YP_001562765.1 1930387 R 398578 CDS YP_001562766.1 160897184 5747296 1931589..1931933 1 NC_010002.1 KEGG: pol:Bpro_2505 hypothetical protein; hypothetical protein 1931933 5747296 Daci_1738 Delftia acidovorans SPH-1 hypothetical protein YP_001562766.1 1931589 D 398578 CDS YP_001562767.1 160897185 5747297 1932026..1933228 1 NC_010002.1 PFAM: outer membrane efflux protein; KEGG: azo:azo0224 hypothetical outer membrane efflux protein; outer membrane efflux protein 1933228 5747297 Daci_1739 Delftia acidovorans SPH-1 outer membrane efflux protein YP_001562767.1 1932026 D 398578 CDS YP_001562768.1 160897186 5747298 1933225..1933809 1 NC_010002.1 KEGG: mms:mma_3051 hypothetical protein; hypothetical protein 1933809 5747298 Daci_1740 Delftia acidovorans SPH-1 hypothetical protein YP_001562768.1 1933225 D 398578 CDS YP_001562769.1 160897187 5747299 1933806..1934915 1 NC_010002.1 KEGG: azo:azo0226 conserved hypothetical secreted protein; hypothetical protein 1934915 5747299 Daci_1741 Delftia acidovorans SPH-1 hypothetical protein YP_001562769.1 1933806 D 398578 CDS YP_001562770.1 160897188 5747300 1934933..1938064 1 NC_010002.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: azo:azo0227 putative cation efflux system protein; CzcA family heavy metal efflux protein 1938064 5747300 Daci_1742 Delftia acidovorans SPH-1 CzcA family heavy metal efflux protein YP_001562770.1 1934933 D 398578 CDS YP_001562771.1 160897189 5747301 1938131..1938505 1 NC_010002.1 KEGG: azo:azo0228 hypothetical protein; hypothetical protein 1938505 5747301 Daci_1743 Delftia acidovorans SPH-1 hypothetical protein YP_001562771.1 1938131 D 398578 CDS YP_001562772.1 160897190 5747302 complement(1938874..1939359) 1 NC_010002.1 PFAM: protein of unknown function DUF437; KEGG: rme:Rmet_3367 transcriptional regulator; hypothetical protein 1939359 5747302 Daci_1744 Delftia acidovorans SPH-1 hypothetical protein YP_001562772.1 1938874 R 398578 CDS YP_001562773.1 160897191 5747303 complement(1939343..1941514) 1 NC_010002.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rme:Rmet_3368 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1941514 5747303 Daci_1745 Delftia acidovorans SPH-1 N-acetyltransferase GCN5 YP_001562773.1 1939343 R 398578 CDS YP_001562774.1 160897192 5747304 1942457..1942693 1 NC_010002.1 hypothetical protein 1942693 5747304 Daci_1746 Delftia acidovorans SPH-1 hypothetical protein YP_001562774.1 1942457 D 398578 CDS YP_001562775.1 160897193 5747305 1942764..1943264 1 NC_010002.1 KEGG: xom:XOO_2155 hypothetical protein; hypothetical protein 1943264 5747305 Daci_1747 Delftia acidovorans SPH-1 hypothetical protein YP_001562775.1 1942764 D 398578 CDS YP_001562776.1 160897194 5747306 complement(1943613..1943852) 1 NC_010002.1 KEGG: pol:Bpro_5204 integrase, catalytic region; integrase catalytic subunit 1943852 5747306 Daci_1748 Delftia acidovorans SPH-1 integrase catalytic subunit YP_001562776.1 1943613 R 398578 CDS YP_001562777.1 160897195 5747308 complement(1944074..1944274) 1 NC_010002.1 KEGG: ajs:Ajs_3905 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 1944274 5747308 Daci_1750 Delftia acidovorans SPH-1 transposase IS3/IS911 family protein YP_001562777.1 1944074 R 398578 CDS YP_001562778.1 160897196 5747309 complement(1944652..1946502) 1 NC_010002.1 KEGG: yen:YE0990 AYP/GTP-binding protein; AYP/GTP-binding protein 1946502 5747309 Daci_1751 Delftia acidovorans SPH-1 AYP/GTP-binding protein YP_001562778.1 1944652 R 398578 CDS YP_001562779.1 160897197 5747310 complement(1946499..1946954) 1 NC_010002.1 KEGG: yen:YE0991 hypothetical protein; hypothetical protein 1946954 5747310 Daci_1752 Delftia acidovorans SPH-1 hypothetical protein YP_001562779.1 1946499 R 398578 CDS YP_001562780.1 160897198 5747311 complement(1946951..1948228) 1 NC_010002.1 KEGG: yen:YE0992 hypothetical protein; hypothetical protein 1948228 5747311 Daci_1753 Delftia acidovorans SPH-1 hypothetical protein YP_001562780.1 1946951 R 398578 CDS YP_001562781.1 160897199 5747312 1948429..1949589 1 NC_010002.1 PFAM: Integrase catalytic region; KEGG: pfo:Pfl_2765 integrase, catalytic region; integrase catalytic subunit 1949589 5747312 Daci_1754 Delftia acidovorans SPH-1 integrase catalytic subunit YP_001562781.1 1948429 D 398578 CDS YP_001562782.1 160897200 5747313 complement(1949763..1951898) 1 NC_010002.1 PFAM: helix-turn-helix domain protein; KEGG: bpd:BURPS668_3499 transcriptional regulator, XRE family; XRE family transcriptional regulator 1951898 5747313 Daci_1755 Delftia acidovorans SPH-1 XRE family transcriptional regulator YP_001562782.1 1949763 R 398578 CDS YP_001562783.1 160897201 5747314 complement(1952247..1953035) 1 NC_010002.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: reu:Reut_B4595 regulatory protein, IclR; IclR family transcriptional regulator 1953035 5747314 Daci_1756 Delftia acidovorans SPH-1 IclR family transcriptional regulator YP_001562783.1 1952247 R 398578 CDS YP_001562784.1 160897202 5747315 1953312..1954289 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: reh:H16_B1440 probable extra-cytoplasmic solute receptor; hypothetical protein 1954289 5747315 Daci_1757 Delftia acidovorans SPH-1 hypothetical protein YP_001562784.1 1953312 D 398578 CDS YP_001562785.1 160897203 5747316 1954323..1955114 1 NC_010002.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: reh:H16_B1439 enoyl-CoA hydratase/carnithine racemase; enoyl-CoA hydratase/isomerase 1955114 5747316 Daci_1758 Delftia acidovorans SPH-1 enoyl-CoA hydratase/isomerase YP_001562785.1 1954323 D 398578 CDS YP_001562786.1 160897204 5747317 1955119..1957221 1 NC_010002.1 PFAM: CoA-binding domain protein; ATP-grasp domain protein; KEGG: reu:Reut_B4596 CoA-binding; CoA-binding domain-containing protein 1957221 5747317 Daci_1759 Delftia acidovorans SPH-1 CoA-binding domain-containing protein YP_001562786.1 1955119 D 398578 CDS YP_001562787.1 160897205 5747318 1957293..1958630 1 NC_010002.1 PFAM: MmgE/PrpD family protein; KEGG: reh:H16_B1436 2-methylcitrate dehydratase; MmgE/PrpD family protein 1958630 5747318 Daci_1760 Delftia acidovorans SPH-1 MmgE/PrpD family protein YP_001562787.1 1957293 D 398578 CDS YP_001562788.1 160897206 5747319 complement(1958666..1960648) 1 NC_010002.1 TIGRFAM: acetate--CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: mpt:Mpe_A1385 acetyl-coenzyme A synthetase; acetate--CoA ligase 1960648 5747319 Daci_1761 Delftia acidovorans SPH-1 acetate--CoA ligase YP_001562788.1 1958666 R 398578 CDS YP_001562789.1 160897207 5747320 complement(1960755..1961666) 1 NC_010002.1 KEGG: rfr:Rfer_1849 (acyl-carrier protein) S-malonyltransferase; (acyl-carrier protein) S-malonyltransferase 1961666 5747320 Daci_1762 Delftia acidovorans SPH-1 (acyl-carrier protein) S-malonyltransferase YP_001562789.1 1960755 R 398578 CDS YP_001562790.1 160897208 5747321 complement(1961663..1962523) 1 NC_010002.1 PFAM: triphosphoribosyl-dephospho-CoA protein; KEGG: mpt:Mpe_A2891 triphosphoribosyl-dephospho-CoA synthase; triphosphoribosyl-dephospho-CoA synthase 1962523 5747321 Daci_1763 Delftia acidovorans SPH-1 triphosphoribosyl-dephospho-CoA synthase YP_001562790.1 1961663 R 398578 CDS YP_001562791.1 160897209 5747322 complement(1962520..1963233) 1 NC_010002.1 TIGRFAM: holo-ACP synthase, malonate decarboxylase-specific; KEGG: rfr:Rfer_1847 malonate decarboxylase; malonate decarboxylase-specific holo-ACP synthase 1963233 5747322 Daci_1764 Delftia acidovorans SPH-1 malonate decarboxylase-specific holo-ACP synthase YP_001562791.1 1962520 R 398578 CDS YP_001562792.1 160897210 5747323 complement(1963230..1963931) 1 NC_010002.1 TIGRFAM: malonate decarboxylase, gamma subunit; PFAM: malonate decarboxylase gamma subunit; KEGG: mpt:Mpe_A2892 malonate decarboxylase gamma subunit; malonate decarboxylase subunit gamma 1963931 5747323 Daci_1765 Delftia acidovorans SPH-1 malonate decarboxylase subunit gamma YP_001562792.1 1963230 R 398578 CDS YP_001562793.1 160897211 5747324 complement(1963937..1964854) 1 NC_010002.1 The beta subunit catalyzes the decarboxylation of the malonyl moiety on coenzyme A; malonate decarboxylase subunit beta 1964854 5747324 Daci_1766 Delftia acidovorans SPH-1 malonate decarboxylase subunit beta YP_001562793.1 1963937 R 398578 CDS YP_001562794.1 160897212 5747325 complement(1964851..1965183) 1 NC_010002.1 TIGRFAM: malonate decarboxylase acyl carrier protein; PFAM: malonate decarboxylase delta subunit; KEGG: mpt:Mpe_A2894 delta subunit of malonate decarboxylase; malonate decarboxylase acyl carrier protein 1965183 5747325 Daci_1767 Delftia acidovorans SPH-1 malonate decarboxylase acyl carrier protein YP_001562794.1 1964851 R 398578 CDS YP_001562795.1 160897213 5747326 complement(1965194..1966876) 1 NC_010002.1 TIGRFAM: malonate decarboxylase, alpha subunit; KEGG: mpt:Mpe_A2895 alpha subunit of malonate decarboxylase; malonate decarboxylase subunit alpha 1966876 5747326 Daci_1768 Delftia acidovorans SPH-1 malonate decarboxylase subunit alpha YP_001562795.1 1965194 R 398578 CDS YP_001562796.1 160897214 5747327 complement(1966942..1968315) 1 NC_010002.1 PFAM: Citrate transporter; Dicarboxylate carrier MatC domain protein; KEGG: mpt:Mpe_A2896 dicarboxylate carrier protein; dicarboxylate carrier MatC domain-containing protein 1968315 5747327 Daci_1769 Delftia acidovorans SPH-1 dicarboxylate carrier MatC domain-containing protein YP_001562796.1 1966942 R 398578 CDS YP_001562797.1 160897215 5747328 complement(1968483..1969397) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mpt:Mpe_A2897 regulatory protein, LysR; LysR family transcriptional regulator 1969397 5747328 Daci_1770 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001562797.1 1968483 R 398578 CDS YP_001562798.1 160897216 5747329 complement(1969499..1970653) 1 NC_010002.1 PFAM: luciferase family protein; KEGG: bxe:Bxe_B1542 alkanesulfonate monooxygenase; alkanesulfonate monooxygenase 1970653 5747329 Daci_1771 Delftia acidovorans SPH-1 alkanesulfonate monooxygenase YP_001562798.1 1969499 R 398578 CDS YP_001562799.1 160897217 5747330 complement(1970650..1971810) 1 NC_010002.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: pap:PSPA7_2908 probable transcriptional regulator; putative sigma-54 specific transcriptional regulator 1971810 5747330 Daci_1772 Delftia acidovorans SPH-1 putative sigma-54 specific transcriptional regulator YP_001562799.1 1970650 R 398578 CDS YP_001562800.1 160897218 5747331 complement(1971820..1973001) 1 NC_010002.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pap:PSPA7_2907 probable FMNH2-dependent monooxygenase; acyl-CoA dehydrogenase type 2 1973001 5747331 Daci_1773 Delftia acidovorans SPH-1 acyl-CoA dehydrogenase type 2 YP_001562800.1 1971820 R 398578 CDS YP_001562801.1 160897219 5747332 complement(1972998..1973627) 1 NC_010002.1 PFAM: NADPH-dependent FMN reductase; KEGG: pfo:Pfl_3915 FMN reductase; FMN reductase 1973627 5747332 Daci_1774 Delftia acidovorans SPH-1 FMN reductase YP_001562801.1 1972998 R 398578 CDS YP_001562802.1 160897220 5747333 complement(1973899..1975209) 1 NC_010002.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: xac:XAC0854 hypothetical protein; acyl-CoA dehydrogenase type 2 1975209 5747333 Daci_1775 Delftia acidovorans SPH-1 acyl-CoA dehydrogenase type 2 YP_001562802.1 1973899 R 398578 CDS YP_001562803.1 160897221 5747334 complement(1975362..1976726) 1 NC_010002.1 KEGG: bxe:Bxe_B1543 putative monooxygenase, DszA family; DszA family monooxygenase 1976726 5747334 Daci_1776 Delftia acidovorans SPH-1 DszA family monooxygenase YP_001562803.1 1975362 R 398578 CDS YP_001562804.1 160897222 5747335 complement(1976752..1977576) 1 NC_010002.1 PFAM: NLPA lipoprotein; KEGG: ppu:PP_0221 ABC transporter, periplasmic binding protein, putative; NLPA lipoprotein 1977576 5747335 Daci_1777 Delftia acidovorans SPH-1 NLPA lipoprotein YP_001562804.1 1976752 R 398578 CDS YP_001562805.1 160897223 5747336 complement(1977602..1978879) 1 NC_010002.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_B1544 hypothetical protein; acyl-CoA dehydrogenase type 2 1978879 5747336 Daci_1778 Delftia acidovorans SPH-1 acyl-CoA dehydrogenase type 2 YP_001562805.1 1977602 R 398578 CDS YP_001562806.1 160897224 5747337 complement(1978885..1980177) 1 NC_010002.1 PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: aav:Aave_2009 acyl-CoA dehydrogenase, type 2, C-terminal domain; acyl-CoA dehydrogenase type 2 1980177 5747337 Daci_1779 Delftia acidovorans SPH-1 acyl-CoA dehydrogenase type 2 YP_001562806.1 1978885 R 398578 CDS YP_001562807.1 160897225 5747338 complement(1980261..1980923) 1 NC_010002.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pmy:Pmen_2366 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1980923 5747338 Daci_1780 Delftia acidovorans SPH-1 binding-protein-dependent transport system inner membrane protein YP_001562807.1 1980261 R 398578 CDS YP_001562808.1 160897226 5747339 complement(1980895..1982088) 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pfl:PFL_0241 D-methionine ABC transporter, ATP-binding protein; ABC transporter-like protein 1982088 5747339 Daci_1781 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001562808.1 1980895 R 398578 CDS YP_001562809.1 160897227 5747340 complement(1982112..1982918) 1 NC_010002.1 PFAM: NLPA lipoprotein; KEGG: bur:Bcep18194_B0309 NlpA lipoprotein; NLPA lipoprotein 1982918 5747340 Daci_1782 Delftia acidovorans SPH-1 NLPA lipoprotein YP_001562809.1 1982112 R 398578 CDS YP_001562810.1 160897228 5747341 complement(1982965..1983759) 1 NC_010002.1 PFAM: NLPA lipoprotein; KEGG: bam:Bamb_4689 NlpA lipoprotein; NLPA lipoprotein 1983759 5747341 Daci_1783 Delftia acidovorans SPH-1 NLPA lipoprotein YP_001562810.1 1982965 R 398578 CDS YP_001562811.1 160897229 5747342 complement(1984048..1984620) 1 NC_010002.1 PFAM: regulatory protein MarR; KEGG: bpl:BURPS1106A_A2106 transcriptional regulator, MarR family; MarR family transcriptional regulator 1984620 5747342 Daci_1784 Delftia acidovorans SPH-1 MarR family transcriptional regulator YP_001562811.1 1984048 R 398578 CDS YP_001562812.1 160897230 5747343 1984762..1985220 1 NC_010002.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bmn:BMA10247_A0721 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 1985220 5747343 Daci_1785 Delftia acidovorans SPH-1 glyoxalase/bleomycin resistance protein/dioxygenase YP_001562812.1 1984762 D 398578 CDS YP_001562813.1 160897231 5747344 1985260..1985946 1 NC_010002.1 KEGG: acr:Acry_2631 conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family-like protein; flavoprotein oxygenase DIM6/NTAB family-like protein 1985946 5747344 Daci_1786 Delftia acidovorans SPH-1 flavoprotein oxygenase DIM6/NTAB family-like protein YP_001562813.1 1985260 D 398578 CDS YP_001562814.1 160897232 5747345 1985957..1986760 1 NC_010002.1 KEGG: rha:RHA1_ro10137 2-oxopent-4-enoate hydratase; TIGRFAM: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; PFAM: Hydratase/decarboxylase; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 1986760 5747345 Daci_1787 Delftia acidovorans SPH-1 2-oxo-hepta-3-ene-1,7-dioic acid hydratase YP_001562814.1 1985957 D 398578 CDS YP_001562815.1 160897233 5747346 1986899..1987669 1 NC_010002.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ajs:Ajs_2567 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1987669 5747346 Daci_1788 Delftia acidovorans SPH-1 short-chain dehydrogenase/reductase SDR YP_001562815.1 1986899 D 398578 CDS YP_001562816.1 160897234 5747347 complement(1987688..1988866) 1 NC_010002.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: azo:azo1936 putative AraC-family transcriptional regulator; AraC family transcriptional regulator 1988866 5747347 Daci_1789 Delftia acidovorans SPH-1 AraC family transcriptional regulator YP_001562816.1 1987688 R 398578 CDS YP_001562817.1 160897235 5747348 1988888..1989679 1 NC_010002.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: reh:H16_A3487 putative short chain dehydrogenase; short chain dehydrogenase 1989679 5747348 Daci_1790 Delftia acidovorans SPH-1 short chain dehydrogenase YP_001562817.1 1988888 D 398578 CDS YP_001562818.1 160897236 5747349 1989716..1991011 1 NC_010002.1 KEGG: reh:H16_A3486 putative dehydrogenase/oxygenase subunit (flavoprotein); putative dehydrogenase/oxygenase subunit 1991011 5747349 Daci_1791 Delftia acidovorans SPH-1 putative dehydrogenase/oxygenase subunit YP_001562818.1 1989716 D 398578 CDS YP_001562819.1 160897237 5747350 1991026..1991553 1 NC_010002.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: aau:AAur_0247 putative monooxygenase component B; flavin reductase domain-containing protein 1991553 5747350 Daci_1792 Delftia acidovorans SPH-1 flavin reductase domain-containing protein YP_001562819.1 1991026 D 398578 CDS YP_001562820.1 160897238 5747351 1991614..1992849 1 NC_010002.1 PFAM: dienelactone hydrolase; KEGG: rme:Rmet_3321 dienelactone hydrolase; carboxymethylenebutenolidase 1992849 5747351 Daci_1793 Delftia acidovorans SPH-1 carboxymethylenebutenolidase YP_001562820.1 1991614 D 398578 CDS YP_001562821.1 160897239 5747352 1992928..1993557 1 NC_010002.1 PFAM: regulatory protein MarR; KEGG: bra:BRADO6297 putative transcriptional regulatory protein, MarR family; MarR family transcriptional regulator 1993557 5747352 Daci_1794 Delftia acidovorans SPH-1 MarR family transcriptional regulator YP_001562821.1 1992928 D 398578 CDS YP_001562822.1 160897240 5747353 1993550..1994383 1 NC_010002.1 PFAM: class II aldolase/adducin family protein; KEGG: bxe:Bxe_B1223 putative aldolase; aldolase II superfamily protein 1994383 5747353 Daci_1795 Delftia acidovorans SPH-1 aldolase II superfamily protein YP_001562822.1 1993550 D 398578 CDS YP_001562823.1 160897241 5747354 1994402..1995427 1 NC_010002.1 KEGG: pol:Bpro_0197 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein; 2-dehydropantoate 2-reductase 1995427 5747354 Daci_1796 Delftia acidovorans SPH-1 2-dehydropantoate 2-reductase YP_001562823.1 1994402 D 398578 CDS YP_001562824.1 160897242 5747355 1995480..1995878 1 NC_010002.1 PFAM: CutA1 divalent ion tolerance protein; KEGG: ajs:Ajs_3521 CutA1 divalent ion tolerance protein; CutA1 divalent ion tolerance protein 1995878 5747355 Daci_1797 Delftia acidovorans SPH-1 CutA1 divalent ion tolerance protein YP_001562824.1 1995480 D 398578 CDS YP_001562825.1 160897243 5747356 complement(1995865..1996854) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: reh:H16_B0748 probable extra-cytoplasmic solute receptor; hypothetical protein 1996854 5747356 Daci_1798 Delftia acidovorans SPH-1 hypothetical protein YP_001562825.1 1995865 R 398578 CDS YP_001562826.1 160897244 5747357 complement(1997093..1998313) 1 NC_010002.1 KEGG: ajs:Ajs_3520 signal recognition particle-docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; signal recognition particle-docking protein FtsY 1998313 5747357 Daci_1799 Delftia acidovorans SPH-1 signal recognition particle-docking protein FtsY YP_001562826.1 1997093 R 398578 CDS YP_001562827.1 160897245 5747358 1998342..1999820 1 NC_010002.1 PFAM: peptidase M16 domain protein; KEGG: ajs:Ajs_3519 peptidase M16 domain protein; peptidase M16 domain-containing protein 1999820 5747358 Daci_1800 Delftia acidovorans SPH-1 peptidase M16 domain-containing protein YP_001562827.1 1998342 D 398578 CDS YP_001562828.1 160897246 5747359 1999847..2001208 1 NC_010002.1 PFAM: peptidase M16 domain protein; KEGG: aav:Aave_3871 peptidase M16 domain protein; peptidase M16 domain-containing protein 2001208 5747359 Daci_1801 Delftia acidovorans SPH-1 peptidase M16 domain-containing protein YP_001562828.1 1999847 D 398578 CDS YP_001562829.1 160897247 5747360 2001205..2001915 1 NC_010002.1 TIGRFAM: methyltransferase; PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_3517 putative methyltransferase; methyltransferase 2001915 5747360 Daci_1802 Delftia acidovorans SPH-1 methyltransferase YP_001562829.1 2001205 D 398578 CDS YP_001562830.1 160897248 5747361 2002032..2002547 1 NC_010002.1 KEGG: rfr:Rfer_1667 coenzyme A biosynthesis protein; TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase; pantetheine-phosphate adenylyltransferase 2002547 5747361 Daci_1803 Delftia acidovorans SPH-1 pantetheine-phosphate adenylyltransferase YP_001562830.1 2002032 D 398578 CDS YP_001562831.1 160897249 5747362 complement(2002665..2003786) 1 NC_010002.1 KEGG: aav:Aave_3868 hypothetical protein; hypothetical protein 2003786 5747362 Daci_1804 Delftia acidovorans SPH-1 hypothetical protein YP_001562831.1 2002665 R 398578 CDS YP_001562832.1 160897250 5747363 complement(2003959..2004279) 1 NC_010002.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: aav:Aave_3867 transport-associated; transport-associated protein 2004279 5747363 Daci_1805 Delftia acidovorans SPH-1 transport-associated protein YP_001562832.1 2003959 R 398578 CDS YP_001562833.1 160897251 5747364 complement(2004359..2004748) 1 NC_010002.1 KEGG: aav:Aave_3865 hypothetical protein; hypothetical protein 2004748 5747364 Daci_1806 Delftia acidovorans SPH-1 hypothetical protein YP_001562833.1 2004359 R 398578 CDS YP_001562834.1 160897252 5747365 complement(2004860..2005237) 1 NC_010002.1 PFAM: protein of unknown function DUF1328; KEGG: ajs:Ajs_3511 protein of unknown function DUF1328; hypothetical protein 2005237 5747365 Daci_1807 Delftia acidovorans SPH-1 hypothetical protein YP_001562834.1 2004860 R 398578 CDS YP_001562835.1 160897253 5747366 complement(2005382..2006767) 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; CHASE3 domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: aav:Aave_3863 multi-sensor signal transduction histidine kinase; histidine kinase 2006767 5747366 Daci_1808 Delftia acidovorans SPH-1 histidine kinase YP_001562835.1 2005382 R 398578 CDS YP_001562836.1 160897254 5747367 2006905..2007537 1 NC_010002.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: aav:Aave_3862 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 2007537 5747367 Daci_1809 Delftia acidovorans SPH-1 two component LuxR family transcriptional regulator YP_001562836.1 2006905 D 398578 CDS YP_001562837.1 160897255 5747368 complement(2007626..2008054) 1 NC_010002.1 PFAM: response regulator receiver; KEGG: aav:Aave_3861 response regulator receiver protein; response regulator receiver protein 2008054 5747368 Daci_1810 Delftia acidovorans SPH-1 response regulator receiver protein YP_001562837.1 2007626 R 398578 CDS YP_001562838.1 160897256 5747369 complement(2008144..2008896) 1 NC_010002.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: aav:Aave_3860 UBA/ThiF-type NAD/FAD binding protein; UBA/THIF-type NAD/FAD-binding protein 2008896 5747369 Daci_1811 Delftia acidovorans SPH-1 UBA/THIF-type NAD/FAD-binding protein YP_001562838.1 2008144 R 398578 CDS YP_001562839.1 160897257 5747370 complement(2008973..2010409) 1 NC_010002.1 KEGG: ajs:Ajs_3506 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; carboxyl-terminal protease 2010409 5747370 Daci_1812 Delftia acidovorans SPH-1 carboxyl-terminal protease YP_001562839.1 2008973 R 398578 CDS YP_001562840.1 160897258 5747371 complement(2010531..2011274) 1 NC_010002.1 2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase 2011274 gpmA 5747371 gpmA Delftia acidovorans SPH-1 phosphoglyceromutase YP_001562840.1 2010531 R 398578 CDS YP_001562841.1 160897259 5747372 2011373..2011780 1 NC_010002.1 PFAM: Rhodanese domain protein; KEGG: ajs:Ajs_3504 rhodanese domain protein; rhodanese domain-containing protein 2011780 5747372 Daci_1814 Delftia acidovorans SPH-1 rhodanese domain-containing protein YP_001562841.1 2011373 D 398578 CDS YP_001562842.1 160897260 5747373 2011869..2012126 1 NC_010002.1 TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; KEGG: ajs:Ajs_3503 glutaredoxin 3; glutaredoxin 3 2012126 5747373 Daci_1815 Delftia acidovorans SPH-1 glutaredoxin 3 YP_001562842.1 2011869 D 398578 CDS YP_001562843.1 160897261 5747374 2012208..2012711 1 NC_010002.1 TIGRFAM: protein-export protein SecB; PFAM: protein export chaperone SecB; KEGG: ajs:Ajs_3502 protein-export protein SecB; protein-export protein SecB 2012711 5747374 Daci_1816 Delftia acidovorans SPH-1 protein-export protein SecB YP_001562843.1 2012208 D 398578 CDS YP_001562844.1 160897262 5747375 2012832..2013842 1 NC_010002.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 2013842 gpsA 5747375 gpsA Delftia acidovorans SPH-1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_001562844.1 2012832 D 398578 CDS YP_001562845.1 160897263 5747376 complement(2014022..2015317) 1 NC_010002.1 catalyzes the decarboxylation of diaminopimelate into lysine; pyridoxal phosphate(PLP)-binding; diaminopimelate decarboxylase 2015317 5747376 Daci_1818 Delftia acidovorans SPH-1 diaminopimelate decarboxylase YP_001562845.1 2014022 R 398578 CDS YP_001562846.1 160897264 5747377 2015390..2016319 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_4245 transcriptional regulator, LysR family; LysR family transcriptional regulator 2016319 5747377 Daci_1819 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001562846.1 2015390 D 398578 CDS YP_001562847.1 160897265 5747378 complement(2016342..2016554) 1 NC_010002.1 KEGG: bpd:BURPS668_A1895 hypothetical protein; hypothetical protein 2016554 5747378 Daci_1820 Delftia acidovorans SPH-1 hypothetical protein YP_001562847.1 2016342 R 398578 CDS YP_001562848.1 160897266 5747379 complement(2016600..2017451) 1 NC_010002.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 2017451 panC 5747379 panC Delftia acidovorans SPH-1 pantoate--beta-alanine ligase YP_001562848.1 2016600 R 398578 CDS YP_001562849.1 160897267 5747380 complement(2017510..2018391) 1 NC_010002.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 2018391 panB 5747380 panB Delftia acidovorans SPH-1 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_001562849.1 2017510 R 398578 CDS YP_001562850.1 160897268 5747381 complement(2018479..2020041) 1 NC_010002.1 hypothetical protein 2020041 5747381 Daci_1823 Delftia acidovorans SPH-1 hypothetical protein YP_001562850.1 2018479 R 398578 CDS YP_001562851.1 160897269 5747382 complement(2020045..2021112) 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: chu:CHU_1770 ABC transporter, ATP-binding protein; ABC transporter-like protein 2021112 5747382 Daci_1824 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001562851.1 2020045 R 398578 CDS YP_001562852.1 160897270 5747383 2021347..2022156 1 NC_010002.1 SMART: cyclic nucleotide-binding; KEGG: neu:NE1296 cyclic nucleotide-binding domain:cAMP-dependent protein kinase; cyclic nucleotide-binding protein 2022156 5747383 Daci_1825 Delftia acidovorans SPH-1 cyclic nucleotide-binding protein YP_001562852.1 2021347 D 398578 CDS YP_001562853.1 160897271 5747384 2022348..2022689 1 NC_010002.1 KEGG: reh:H16_A1823 hypothetical protein; hypothetical protein 2022689 5747384 Daci_1826 Delftia acidovorans SPH-1 hypothetical protein YP_001562853.1 2022348 D 398578 CDS YP_001562854.1 160897272 5747386 2024831..2025814 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: rme:Rmet_3604 uncharacterized protein UPF0065; hypothetical protein 2025814 5747386 Daci_1829 Delftia acidovorans SPH-1 hypothetical protein YP_001562854.1 2024831 D 398578 CDS YP_001562855.1 160897273 5747387 complement(2025863..2026501) 1 NC_010002.1 PFAM: DTW domain containing protein; KEGG: ajs:Ajs_1957 DTW domain containing protein; DTW domain-containing protein 2026501 5747387 Daci_1830 Delftia acidovorans SPH-1 DTW domain-containing protein YP_001562855.1 2025863 R 398578 CDS YP_001562856.1 160897274 5747388 complement(2026517..2026876) 1 NC_010002.1 PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase; KEGG: ajs:Ajs_3495 5-carboxymethyl-2-hydroxymuconate isomerase; 5-carboxymethyl-2-hydroxymuconate isomerase 2026876 5747388 Daci_1831 Delftia acidovorans SPH-1 5-carboxymethyl-2-hydroxymuconate isomerase YP_001562856.1 2026517 R 398578 CDS YP_001562857.1 160897275 5747389 complement(2026908..2028125) 1 NC_010002.1 KEGG: aav:Aave_3843 8-amino-7-oxononanoate synthase; TIGRFAM: 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II; 8-amino-7-oxononanoate synthase 2028125 5747389 Daci_1832 Delftia acidovorans SPH-1 8-amino-7-oxononanoate synthase YP_001562857.1 2026908 R 398578 CDS YP_001562858.1 160897276 5747390 complement(2028122..2028823) 1 NC_010002.1 KEGG: pol:Bpro_0899 dethiobiotin synthase; TIGRFAM: dethiobiotin synthase; PFAM: Cobyrinic acid ac-diamide synthase; dethiobiotin synthase 2028823 5747390 Daci_1833 Delftia acidovorans SPH-1 dethiobiotin synthase YP_001562858.1 2028122 R 398578 CDS YP_001562859.1 160897277 5747391 complement(2028820..2030142) 1 NC_010002.1 TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; KEGG: aav:Aave_3841 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 2030142 5747391 Daci_1834 Delftia acidovorans SPH-1 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_001562859.1 2028820 R 398578 CDS YP_001562860.1 160897278 5747392 complement(2030170..2030550) 1 NC_010002.1 Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 2030550 5747392 Daci_1835 Delftia acidovorans SPH-1 aspartate alpha-decarboxylase YP_001562860.1 2030170 R 398578 CDS YP_001562861.1 160897279 5747393 complement(2030692..2031057) 1 NC_010002.1 PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: aav:Aave_3845 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; hypothetical protein 2031057 5747393 Daci_1836 Delftia acidovorans SPH-1 hypothetical protein YP_001562861.1 2030692 R 398578 CDS YP_001562862.1 160897280 5747394 complement(2031066..2031704) 1 NC_010002.1 KEGG: aav:Aave_3844 hypothetical protein; hypothetical protein 2031704 5747394 Daci_1837 Delftia acidovorans SPH-1 hypothetical protein YP_001562862.1 2031066 R 398578 CDS YP_001562863.1 160897281 5747395 complement(2031764..2032657) 1 NC_010002.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: ajs:Ajs_3492 chromosome segregation and condensation protein ScpA; chromosome segregation and condensation protein ScpA 2032657 5747395 Daci_1838 Delftia acidovorans SPH-1 chromosome segregation and condensation protein ScpA YP_001562863.1 2031764 R 398578 CDS YP_001562864.1 160897282 5747396 complement(2032706..2032909) 1 NC_010002.1 KEGG: ajs:Ajs_3491 hypothetical protein; hypothetical protein 2032909 5747396 Daci_1839 Delftia acidovorans SPH-1 hypothetical protein YP_001562864.1 2032706 R 398578 CDS YP_001562865.1 160897283 5747397 2032956..2033453 1 NC_010002.1 KEGG: ajs:Ajs_3490 putative lipoprotein; putative lipoprotein 2033453 5747397 Daci_1840 Delftia acidovorans SPH-1 putative lipoprotein YP_001562865.1 2032956 D 398578 CDS YP_001562866.1 160897284 5747398 2033565..2034278 1 NC_010002.1 PFAM: protein of unknown function DUF161; KEGG: ajs:Ajs_3489 protein of unknown function DUF161; hypothetical protein 2034278 5747398 Daci_1841 Delftia acidovorans SPH-1 hypothetical protein YP_001562866.1 2033565 D 398578 CDS YP_001562867.1 160897285 5747399 complement(2034281..2034577) 1 NC_010002.1 KEGG: ajs:Ajs_3484 hypothetical protein; hypothetical protein 2034577 5747399 Daci_1842 Delftia acidovorans SPH-1 hypothetical protein YP_001562867.1 2034281 R 398578 CDS YP_001562868.1 160897286 5747400 complement(2034713..2036866) 1 NC_010002.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 2036866 metG 5747400 metG Delftia acidovorans SPH-1 methionyl-tRNA synthetase YP_001562868.1 2034713 R 398578 CDS YP_001562869.1 160897287 5747401 complement(2036919..2038157) 1 NC_010002.1 PFAM: Patatin; KEGG: aav:Aave_3832 patatin; patatin 2038157 5747401 Daci_1844 Delftia acidovorans SPH-1 patatin YP_001562869.1 2036919 R 398578 CDS YP_001562870.1 160897288 5747402 complement(2038214..2038786) 1 NC_010002.1 KEGG: aav:Aave_3831 restriction endonuclease; restriction endonuclease 2038786 5747402 Daci_1845 Delftia acidovorans SPH-1 restriction endonuclease YP_001562870.1 2038214 R 398578 CDS YP_001562871.1 160897289 5747403 2038913..2040004 1 NC_010002.1 PFAM: protein of unknown function DUF59; KEGG: ajs:Ajs_3476 protein of unknown function DUF59; hypothetical protein 2040004 5747403 Daci_1846 Delftia acidovorans SPH-1 hypothetical protein YP_001562871.1 2038913 D 398578 CDS YP_001562872.1 160897290 5747404 2040024..2040992 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pna:Pnap_0823 transcriptional regulator, LysR family; LysR family transcriptional regulator 2040992 5747404 Daci_1847 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001562872.1 2040024 D 398578 CDS YP_001562873.1 160897291 5747405 complement(2040989..2043331) 1 NC_010002.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: aav:Aave_3932 isoquinoline 1-oxidoreductase; aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit 2043331 5747405 Daci_1848 Delftia acidovorans SPH-1 aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit YP_001562873.1 2040989 R 398578 CDS YP_001562874.1 160897292 5747406 complement(2043439..2044134) 1 NC_010002.1 PFAM: isochorismatase hydrolase; KEGG: aav:Aave_3931 isochorismatase hydrolase; isochorismatase hydrolase 2044134 5747406 Daci_1849 Delftia acidovorans SPH-1 isochorismatase hydrolase YP_001562874.1 2043439 R 398578 CDS YP_001562875.1 160897293 5747407 complement(2044131..2045216) 1 NC_010002.1 KEGG: aav:Aave_3930 hypothetical protein; hypothetical protein 2045216 5747407 Daci_1850 Delftia acidovorans SPH-1 hypothetical protein YP_001562875.1 2044131 R 398578 CDS YP_001562876.1 160897294 5747408 complement(2045267..2046118) 1 NC_010002.1 PFAM: alpha/beta hydrolase fold; KEGG: aav:Aave_3929 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 2046118 5747408 Daci_1851 Delftia acidovorans SPH-1 alpha/beta hydrolase fold protein YP_001562876.1 2045267 R 398578 CDS YP_001562877.1 160897295 5747409 complement(2046130..2046918) 1 NC_010002.1 PFAM: Asp/Glu/hydantoin racemase; KEGG: aav:Aave_3928 Asp/Glu racemase; Asp/Glu/hydantoin racemase 2046918 5747409 Daci_1852 Delftia acidovorans SPH-1 Asp/Glu/hydantoin racemase YP_001562877.1 2046130 R 398578 CDS YP_001562878.1 160897296 5747410 2047242..2048399 1 NC_010002.1 PFAM: monooxygenase FAD-binding; KEGG: aav:Aave_3927 salicylate 1-monooxygenase; monooxygenase FAD-binding 2048399 5747410 Daci_1853 Delftia acidovorans SPH-1 monooxygenase FAD-binding YP_001562878.1 2047242 D 398578 CDS YP_001562879.1 160897297 5747411 2048508..2049065 1 NC_010002.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: aav:Aave_3926 (2Fe-2S)-binding domain protein; 2Fe-2S iron-sulfur cluster-binding domain-containing protein 2049065 5747411 Daci_1854 Delftia acidovorans SPH-1 2Fe-2S iron-sulfur cluster-binding domain-containing protein YP_001562879.1 2048508 D 398578 CDS YP_001562880.1 160897298 5747412 2049062..2052052 1 NC_010002.1 KEGG: aav:Aave_3925 cytochrome c, class I; gluconate 2-dehydrogenase 2052052 5747412 Daci_1855 Delftia acidovorans SPH-1 gluconate 2-dehydrogenase YP_001562880.1 2049062 D 398578 CDS YP_001562881.1 160897299 5747413 2052406..2053722 1 NC_010002.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: aav:Aave_3924 major facilitator superfamily MFS_1; major facilitator transporter 2053722 5747413 Daci_1856 Delftia acidovorans SPH-1 major facilitator transporter YP_001562881.1 2052406 D 398578 CDS YP_001562882.1 160897300 5747414 2053969..2054601 1 NC_010002.1 PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: aav:Aave_4248 N-acetylmuramoyl-L-alanine amidase, family 2; N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD 2054601 5747414 Daci_1857 Delftia acidovorans SPH-1 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD YP_001562882.1 2053969 D 398578 CDS YP_001562883.1 160897301 5747415 2054631..2055041 1 NC_010002.1 hypothetical protein 2055041 5747415 Daci_1858 Delftia acidovorans SPH-1 hypothetical protein YP_001562883.1 2054631 D 398578 CDS YP_001562884.1 160897302 5747416 complement(2055103..2055567) 1 NC_010002.1 PFAM: regulatory protein MarR; KEGG: aav:Aave_3922 transcriptional regulator, MarR family; MarR family transcriptional regulator 2055567 5747416 Daci_1859 Delftia acidovorans SPH-1 MarR family transcriptional regulator YP_001562884.1 2055103 R 398578 CDS YP_001562885.1 160897303 5747417 2055846..2058029 1 NC_010002.1 PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: mpt:Mpe_A3709 NADH dehydrogenase (quinone); respiratory-chain NADH dehydrogenase domain-containing protein 2058029 5747417 Daci_1860 Delftia acidovorans SPH-1 respiratory-chain NADH dehydrogenase domain-containing protein YP_001562885.1 2055846 D 398578 CDS YP_001562886.1 160897304 5747418 2058042..2060978 1 NC_010002.1 TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: mpt:Mpe_A3710 NAD-dependent formate dehydrogenase alpha subunit; formate dehydrogenase subunit alpha 2060978 5747418 Daci_1861 Delftia acidovorans SPH-1 formate dehydrogenase subunit alpha YP_001562886.1 2058042 D 398578 CDS YP_001562887.1 160897305 5747419 2060978..2061208 1 NC_010002.1 KEGG: bxe:Bxe_A0963 NAD-dependent formate dehydrogenase, delta subunit; NAD-dependent formate dehydrogenase subunit delta 2061208 5747419 Daci_1862 Delftia acidovorans SPH-1 NAD-dependent formate dehydrogenase subunit delta YP_001562887.1 2060978 D 398578 CDS YP_001562888.1 160897306 5747420 complement(2061229..2061765) 1 NC_010002.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bth:BT_2116 hypothetical protein; N-acetyltransferase GCN5 2061765 5747420 Daci_1863 Delftia acidovorans SPH-1 N-acetyltransferase GCN5 YP_001562888.1 2061229 R 398578 CDS YP_001562889.1 160897307 5747421 complement(2062077..2062961) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pol:Bpro_0673 transcriptional regulator, LysR family; LysR family transcriptional regulator 2062961 5747421 Daci_1864 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001562889.1 2062077 R 398578 CDS YP_001562890.1 160897308 5747422 2063004..2063990 1 NC_010002.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: dar:Daro_0097 protein of unknown function DUF6, transmembrane; hypothetical protein 2063990 5747422 Daci_1865 Delftia acidovorans SPH-1 hypothetical protein YP_001562890.1 2063004 D 398578 CDS YP_001562891.1 160897309 5747423 complement(2064007..2065002) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: pol:Bpro_3854 uncharacterized protein UPF0065; hypothetical protein 2065002 5747423 Daci_1866 Delftia acidovorans SPH-1 hypothetical protein YP_001562891.1 2064007 R 398578 CDS YP_001562892.1 160897310 5747424 complement(2065114..2066028) 1 NC_010002.1 PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase domain protein; KEGG: pna:Pnap_2116 intradiol ring-cleavage dioxygenase; intradiol ring-cleavage dioxygenase 2066028 5747424 Daci_1867 Delftia acidovorans SPH-1 intradiol ring-cleavage dioxygenase YP_001562892.1 2065114 R 398578 CDS YP_001562893.1 160897311 5747425 complement(2066076..2067068) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: pna:Pnap_2117 uncharacterized protein UPF0065; hypothetical protein 2067068 5747425 Daci_1868 Delftia acidovorans SPH-1 hypothetical protein YP_001562893.1 2066076 R 398578 CDS YP_001562894.1 160897312 5747426 complement(2067111..2067389) 1 NC_010002.1 KEGG: ajs:Ajs_0141 muconolactone delta-isomerase; TIGRFAM: muconolactone delta-isomerase; PFAM: Muconolactone delta-isomerase; muconolactone delta-isomerase 2067389 5747426 Daci_1869 Delftia acidovorans SPH-1 muconolactone delta-isomerase YP_001562894.1 2067111 R 398578 CDS YP_001562895.1 160897313 5747427 complement(2067418..2068605) 1 NC_010002.1 TIGRFAM: muconate and chloromuconate cycloisomerase; PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: pna:Pnap_2119 muconate and chloromuconate cycloisomerases; muconate and chloromuconate cycloisomerase 2068605 5747427 Daci_1870 Delftia acidovorans SPH-1 muconate and chloromuconate cycloisomerase YP_001562895.1 2067418 R 398578 CDS YP_001562896.1 160897314 5747428 complement(2068780..2071308) 1 NC_010002.1 KEGG: aav:Aave_2236 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase 2071308 5747428 Daci_1871 Delftia acidovorans SPH-1 PAS/PAC sensor signal transduction histidine kinase YP_001562896.1 2068780 R 398578 CDS YP_001562897.1 160897315 5747429 complement(2071333..2072253) 1 NC_010002.1 PFAM: extracellular solute-binding protein family 3; KEGG: azo:azo0499 putative cyclohexadienyl dehydratase; extracellular solute-binding protein 2072253 5747429 Daci_1872 Delftia acidovorans SPH-1 extracellular solute-binding protein YP_001562897.1 2071333 R 398578 CDS YP_001562898.1 160897316 5747430 complement(2072253..2072624) 1 NC_010002.1 PFAM: response regulator receiver; KEGG: aav:Aave_2238 response regulator receiver protein; response regulator receiver protein 2072624 5747430 Daci_1873 Delftia acidovorans SPH-1 response regulator receiver protein YP_001562898.1 2072253 R 398578 CDS YP_001562899.1 160897317 5747431 2072738..2073376 1 NC_010002.1 TIGRFAM: DNA binding domain protein, excisionase family; PFAM: regulatory protein MerR; response regulator receiver; KEGG: aav:Aave_2239 response regulator receiver protein; response regulator receiver protein 2073376 5747431 Daci_1874 Delftia acidovorans SPH-1 response regulator receiver protein YP_001562899.1 2072738 D 398578 CDS YP_001562900.1 160897318 5747432 2073373..2074140 1 NC_010002.1 PFAM: response regulator receiver; Hpt domain protein; KEGG: aav:Aave_2240 response regulator receiver protein; response regulator receiver protein 2074140 5747432 Daci_1875 Delftia acidovorans SPH-1 response regulator receiver protein YP_001562900.1 2073373 D 398578 CDS YP_001562901.1 160897319 5747433 complement(2074235..2074432) 1 NC_010002.1 hypothetical protein 2074432 5747433 Daci_1876 Delftia acidovorans SPH-1 hypothetical protein YP_001562901.1 2074235 R 398578 CDS YP_001562902.1 160897320 5747434 complement(2074429..2075616) 1 NC_010002.1 PFAM: PepSY-associated TM helix domain protein; KEGG: aav:Aave_3008 PepSY-associated TM helix domain protein; PepSY-associated TM helix domain-containing protein 2075616 5747434 Daci_1877 Delftia acidovorans SPH-1 PepSY-associated TM helix domain-containing protein YP_001562902.1 2074429 R 398578 CDS YP_001562903.1 160897321 5747435 complement(2075671..2077839) 1 NC_010002.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rpc:RPC_2858 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 2077839 5747435 Daci_1878 Delftia acidovorans SPH-1 TonB-dependent siderophore receptor YP_001562903.1 2075671 R 398578 CDS YP_001562904.1 160897322 5747436 complement(2077915..2080440) 1 NC_010002.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: mms:mma_1159 outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid; TonB-dependent siderophore receptor 2080440 5747436 Daci_1879 Delftia acidovorans SPH-1 TonB-dependent siderophore receptor YP_001562904.1 2077915 R 398578 CDS YP_001562905.1 160897323 5747437 complement(2080591..2081574) 1 NC_010002.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bam:Bamb_5992 transcriptional regulator, AraC family; AraC family transcriptional regulator 2081574 5747437 Daci_1880 Delftia acidovorans SPH-1 AraC family transcriptional regulator YP_001562905.1 2080591 R 398578 CDS YP_001562906.1 160897324 5747438 2081692..2082333 1 NC_010002.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: bur:Bcep18194_C6613 metal-dependent phosphohydrolase; metal dependent phosphohydrolase 2082333 5747438 Daci_1881 Delftia acidovorans SPH-1 metal dependent phosphohydrolase YP_001562906.1 2081692 D 398578 CDS YP_001562907.1 160897325 5747439 complement(2082352..2083683) 1 NC_010002.1 PFAM: MmgE/PrpD family protein; KEGG: vei:Veis_3318 MmgE/PrpD family protein; MmgE/PrpD family protein 2083683 5747439 Daci_1882 Delftia acidovorans SPH-1 MmgE/PrpD family protein YP_001562907.1 2082352 R 398578 CDS YP_001562908.1 160897326 5747440 2083883..2085049 1 NC_010002.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rme:Rmet_5425 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein 2085049 5747440 Daci_1883 Delftia acidovorans SPH-1 acyl-CoA dehydrogenase domain-containing protein YP_001562908.1 2083883 D 398578 CDS YP_001562909.1 160897327 5747441 2085090..2086061 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: vei:Veis_3320 uncharacterized protein UPF0065; hypothetical protein 2086061 5747441 Daci_1884 Delftia acidovorans SPH-1 hypothetical protein YP_001562909.1 2085090 D 398578 CDS YP_001562910.1 160897328 5747442 2086070..2088196 1 NC_010002.1 PFAM: CoA-binding domain protein; KEGG: vei:Veis_3321 CoA-binding domain protein; CoA-binding domain-containing protein 2088196 5747442 Daci_1885 Delftia acidovorans SPH-1 CoA-binding domain-containing protein YP_001562910.1 2086070 D 398578 CDS YP_001562911.1 160897329 5747443 2088190..2089044 1 NC_010002.1 PFAM: alpha/beta hydrolase fold; KEGG: rme:Rmet_4220 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 2089044 5747443 Daci_1886 Delftia acidovorans SPH-1 alpha/beta hydrolase fold protein YP_001562911.1 2088190 D 398578 CDS YP_001562912.1 160897330 5747444 2089054..2089941 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: vei:Veis_3317 transcriptional regulator, LysR family; LysR family transcriptional regulator 2089941 5747444 Daci_1887 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001562912.1 2089054 D 398578 CDS YP_001562913.1 160897331 5747445 complement(2089925..2091139) 1 NC_010002.1 PFAM: major facilitator superfamily MFS_1; KEGG: pfl:PFL_4411 mutlidrug resistance protein, putative; major facilitator transporter 2091139 5747445 Daci_1888 Delftia acidovorans SPH-1 major facilitator transporter YP_001562913.1 2089925 R 398578 CDS YP_001562914.1 160897332 5747446 2091235..2091822 1 NC_010002.1 KEGG: aav:Aave_4457 transcriptional regulator, TetR family; TetR family transcriptional regulator 2091822 5747446 Daci_1889 Delftia acidovorans SPH-1 TetR family transcriptional regulator YP_001562914.1 2091235 D 398578 CDS YP_001562915.1 160897333 5747447 complement(2091819..2093285) 1 NC_010002.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: ppf:Pput_2733 putative transcriptional regulator, GntR family; transcriptional regulator 2093285 5747447 Daci_1890 Delftia acidovorans SPH-1 transcriptional regulator YP_001562915.1 2091819 R 398578 CDS YP_001562916.1 160897334 5747448 2093322..2094185 1 NC_010002.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: nmu:Nmul_A2052 protein of unknown function DUF6; hypothetical protein 2094185 5747448 Daci_1891 Delftia acidovorans SPH-1 hypothetical protein YP_001562916.1 2093322 D 398578 CDS YP_001562917.1 160897335 5747449 complement(2094237..2095166) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0989 uncharacterized protein UPF0065; hypothetical protein 2095166 5747449 Daci_1892 Delftia acidovorans SPH-1 hypothetical protein YP_001562917.1 2094237 R 398578 CDS YP_001562918.1 160897336 5747450 complement(2095170..2096099) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B2608 transcriptional regulator, LysR family; LysR family transcriptional regulator 2096099 5747450 Daci_1893 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001562918.1 2095170 R 398578 CDS YP_001562919.1 160897337 5747451 2096245..2097633 1 NC_010002.1 KEGG: sco:SCO7477 hypothetical protein; hypothetical protein 2097633 5747451 Daci_1894 Delftia acidovorans SPH-1 hypothetical protein YP_001562919.1 2096245 D 398578 CDS YP_001562920.1 160897338 5747452 2098107..2098682 1 NC_010002.1 hypothetical protein 2098682 5747452 Daci_1895 Delftia acidovorans SPH-1 hypothetical protein YP_001562920.1 2098107 D 398578 CDS YP_001562921.1 160897339 5747453 2098747..2099637 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pna:Pnap_2120 transcriptional regulator, LysR family; LysR family transcriptional regulator 2099637 5747453 Daci_1896 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001562921.1 2098747 D 398578 CDS YP_001562922.1 160897340 5747454 2099883..2100260 1 NC_010002.1 hypothetical protein 2100260 5747454 Daci_1897 Delftia acidovorans SPH-1 hypothetical protein YP_001562922.1 2099883 D 398578 CDS YP_001562923.1 160897341 5747455 complement(2100321..2100677) 1 NC_010002.1 hypothetical protein 2100677 5747455 Daci_1898 Delftia acidovorans SPH-1 hypothetical protein YP_001562923.1 2100321 R 398578 CDS YP_001562924.1 160897342 5747456 2100802..2102970 1 NC_010002.1 PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: ajs:Ajs_3453 5'-nucleotidase domain protein; 5'-nucleotidase domain-containing protein 2102970 5747456 Daci_1899 Delftia acidovorans SPH-1 5'-nucleotidase domain-containing protein YP_001562924.1 2100802 D 398578 CDS YP_001562925.1 160897343 5747457 complement(2103043..2103657) 1 NC_010002.1 PFAM: thioesterase superfamily protein; KEGG: rfr:Rfer_1696 phenylacetic acid degradation-related protein; thioesterase superfamily protein 2103657 5747457 Daci_1900 Delftia acidovorans SPH-1 thioesterase superfamily protein YP_001562925.1 2103043 R 398578 CDS YP_001562926.1 160897344 5747458 2103745..2104251 1 NC_010002.1 PFAM: regulatory protein MarR; KEGG: mpt:Mpe_A2923 transcriptional regulator, MarR family; MarR family transcriptional regulator 2104251 5747458 Daci_1901 Delftia acidovorans SPH-1 MarR family transcriptional regulator YP_001562926.1 2103745 D 398578 CDS YP_001562927.1 160897345 5747459 2104287..2105570 1 NC_010002.1 PFAM: major facilitator superfamily MFS_1; KEGG: reu:Reut_B4323 major facilitator superfamily MFS_1; major facilitator transporter 2105570 5747459 Daci_1902 Delftia acidovorans SPH-1 major facilitator transporter YP_001562927.1 2104287 D 398578 CDS YP_001562928.1 160897346 5747460 complement(2105586..2106245) 1 NC_010002.1 PFAM: Smr protein/MutS2; KEGG: aav:Aave_3777 Smr protein/MutS2; Smr protein/MutS2 2106245 5747460 Daci_1903 Delftia acidovorans SPH-1 Smr protein/MutS2 YP_001562928.1 2105586 R 398578 CDS YP_001562929.1 160897347 5747461 complement(2106315..2106995) 1 NC_010002.1 PFAM: DNA repair protein RadC; KEGG: ajs:Ajs_3450 DNA repair protein RadC; DNA repair protein RadC 2106995 5747461 Daci_1904 Delftia acidovorans SPH-1 DNA repair protein RadC YP_001562929.1 2106315 R 398578 CDS YP_001562930.1 160897348 5747462 2107093..2107563 1 NC_010002.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: aav:Aave_3772 peptidylprolyl isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase 2107563 5747462 Daci_1905 Delftia acidovorans SPH-1 FKBP-type peptidylprolyl isomerase YP_001562930.1 2107093 D 398578 CDS YP_001562931.1 160897349 5747463 2107565..2108563 1 NC_010002.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2108563 ispH 5747463 ispH Delftia acidovorans SPH-1 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_001562931.1 2107565 D 398578 CDS YP_001562932.1 160897350 5747464 complement(2108640..2109338) 1 NC_010002.1 PFAM: CBS domain containing protein; KEGG: ajs:Ajs_3446 putative signal transduction protein with CBS domains; hypothetical protein 2109338 5747464 Daci_1907 Delftia acidovorans SPH-1 hypothetical protein YP_001562932.1 2108640 R 398578 CDS YP_001562933.1 160897351 5747465 2109476..2110792 1 NC_010002.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 2110792 5747465 Daci_1908 Delftia acidovorans SPH-1 seryl-tRNA synthetase YP_001562933.1 2109476 D 398578 CDS YP_001562934.1 160897352 5747467 complement(2110953..2111954) 1 NC_010002.1 PFAM: integrase family protein; KEGG: pna:Pnap_2283 phage integrase family protein; integrase family protein 2111954 5747467 Daci_1909 Delftia acidovorans SPH-1 integrase family protein YP_001562934.1 2110953 R 398578 CDS YP_001562935.1 160897353 5747468 complement(2112745..2112987) 1 NC_010002.1 hypothetical protein 2112987 5747468 Daci_1910 Delftia acidovorans SPH-1 hypothetical protein YP_001562935.1 2112745 R 398578 CDS YP_001562936.1 160897354 5747469 complement(2113205..2114245) 1 NC_010002.1 hypothetical protein 2114245 5747469 Daci_1911 Delftia acidovorans SPH-1 hypothetical protein YP_001562936.1 2113205 R 398578 CDS YP_001562937.1 160897355 5747470 complement(2114425..2114814) 1 NC_010002.1 hypothetical protein 2114814 5747470 Daci_1912 Delftia acidovorans SPH-1 hypothetical protein YP_001562937.1 2114425 R 398578 CDS YP_001562938.1 160897356 5747471 complement(2114847..2115134) 1 NC_010002.1 PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: pnu:Pnuc_0838 histone family protein nucleoid-structuring protein H-NS; histone family protein nucleoid-structuring protein H-NS 2115134 5747471 Daci_1913 Delftia acidovorans SPH-1 histone family protein nucleoid-structuring protein H-NS YP_001562938.1 2114847 R 398578 CDS YP_001562939.1 160897357 5747472 complement(2115365..2115757) 1 NC_010002.1 hypothetical protein 2115757 5747472 Daci_1914 Delftia acidovorans SPH-1 hypothetical protein YP_001562939.1 2115365 R 398578 CDS YP_001562940.1 160897358 5747473 complement(2115774..2116403) 1 NC_010002.1 PFAM: Exonuclease, phage-type; KEGG: har:HEAR2308 unknown prophage (lambda); putative exonuclease; exonuclease 2116403 5747473 Daci_1915 Delftia acidovorans SPH-1 exonuclease YP_001562940.1 2115774 R 398578 CDS YP_001562941.1 160897359 5747474 complement(2116384..2117307) 1 NC_010002.1 PFAM: RecT protein; KEGG: bbr:BB2192 phage-related DNA recombination protein; RecT protein 2117307 5747474 Daci_1916 Delftia acidovorans SPH-1 RecT protein YP_001562941.1 2116384 R 398578 CDS YP_001562942.1 160897360 5747475 complement(2117413..2117673) 1 NC_010002.1 hypothetical protein 2117673 5747475 Daci_1917 Delftia acidovorans SPH-1 hypothetical protein YP_001562942.1 2117413 R 398578 CDS YP_001562943.1 160897361 5747476 complement(2118059..2118244) 1 NC_010002.1 hypothetical protein 2118244 5747476 Daci_1918 Delftia acidovorans SPH-1 hypothetical protein YP_001562943.1 2118059 R 398578 CDS YP_001562944.1 160897362 5747477 complement(2118241..2118618) 1 NC_010002.1 hypothetical protein 2118618 5747477 Daci_1919 Delftia acidovorans SPH-1 hypothetical protein YP_001562944.1 2118241 R 398578 CDS YP_001562945.1 160897363 5747478 complement(2118620..2118919) 1 NC_010002.1 hypothetical protein 2118919 5747478 Daci_1920 Delftia acidovorans SPH-1 hypothetical protein YP_001562945.1 2118620 R 398578 CDS YP_001562946.1 160897364 5747479 complement(2118907..2119143) 1 NC_010002.1 hypothetical protein 2119143 5747479 Daci_1921 Delftia acidovorans SPH-1 hypothetical protein YP_001562946.1 2118907 R 398578 CDS YP_001562947.1 160897365 5747480 complement(2119337..2119633) 1 NC_010002.1 hypothetical protein 2119633 5747480 Daci_1922 Delftia acidovorans SPH-1 hypothetical protein YP_001562947.1 2119337 R 398578 CDS YP_001562948.1 160897366 5747481 complement(2119630..2119878) 1 NC_010002.1 hypothetical protein 2119878 5747481 Daci_1923 Delftia acidovorans SPH-1 hypothetical protein YP_001562948.1 2119630 R 398578 CDS YP_001562949.1 160897367 5747482 complement(2120323..2120634) 1 NC_010002.1 hypothetical protein 2120634 5747482 Daci_1924 Delftia acidovorans SPH-1 hypothetical protein YP_001562949.1 2120323 R 398578 CDS YP_001562950.1 160897368 5747483 complement(2120680..2120925) 1 NC_010002.1 hypothetical protein 2120925 5747483 Daci_1925 Delftia acidovorans SPH-1 hypothetical protein YP_001562950.1 2120680 R 398578 CDS YP_001562951.1 160897369 5747484 complement(2121008..2121349) 1 NC_010002.1 hypothetical protein 2121349 5747484 Daci_1926 Delftia acidovorans SPH-1 hypothetical protein YP_001562951.1 2121008 R 398578 CDS YP_001562952.1 160897370 5747485 complement(2122345..2122542) 1 NC_010002.1 PFAM: protein of unknown function DUF1508; KEGG: pfo:Pfl_1378 duplicated hypothetical protein; hypothetical protein 2122542 5747485 Daci_1927 Delftia acidovorans SPH-1 hypothetical protein YP_001562952.1 2122345 R 398578 CDS YP_001562953.1 160897371 5747486 complement(2122766..2123209) 1 NC_010002.1 hypothetical protein 2123209 5747486 Daci_1928 Delftia acidovorans SPH-1 hypothetical protein YP_001562953.1 2122766 R 398578 CDS YP_001562954.1 160897372 5747487 complement(2123467..2124114) 1 NC_010002.1 PFAM: peptidase S24 and S26 domain protein; KEGG: aav:Aave_1607 putative prophage repressor; peptidase S24/S26 domain-containing protein 2124114 5747487 Daci_1929 Delftia acidovorans SPH-1 peptidase S24/S26 domain-containing protein YP_001562954.1 2123467 R 398578 CDS YP_001562955.1 160897373 5747488 2124428..2124655 1 NC_010002.1 hypothetical protein 2124655 5747488 Daci_1930 Delftia acidovorans SPH-1 hypothetical protein YP_001562955.1 2124428 D 398578 CDS YP_001562956.1 160897374 5747489 2124900..2125676 1 NC_010002.1 KEGG: ecs:ECs1073 hypothetical protein; hypothetical protein 2125676 5747489 Daci_1931 Delftia acidovorans SPH-1 hypothetical protein YP_001562956.1 2124900 D 398578 CDS YP_001562957.1 160897375 5747490 2125673..2126047 1 NC_010002.1 hypothetical protein 2126047 5747490 Daci_1932 Delftia acidovorans SPH-1 hypothetical protein YP_001562957.1 2125673 D 398578 CDS YP_001562958.1 160897376 5747491 2126025..2126996 1 NC_010002.1 KEGG: bbr:BB3510 phage-related hypothetical protein; hypothetical protein 2126996 5747491 Daci_1933 Delftia acidovorans SPH-1 hypothetical protein YP_001562958.1 2126025 D 398578 CDS YP_001562959.1 160897377 5747492 2127169..2127666 1 NC_010002.1 hypothetical protein 2127666 5747492 Daci_1934 Delftia acidovorans SPH-1 hypothetical protein YP_001562959.1 2127169 D 398578 CDS YP_001562960.1 160897378 5747493 2127663..2127911 1 NC_010002.1 hypothetical protein 2127911 5747493 Daci_1935 Delftia acidovorans SPH-1 hypothetical protein YP_001562960.1 2127663 D 398578 CDS YP_001562961.1 160897379 5747494 2127908..2128105 1 NC_010002.1 hypothetical protein 2128105 5747494 Daci_1936 Delftia acidovorans SPH-1 hypothetical protein YP_001562961.1 2127908 D 398578 CDS YP_001562962.1 160897380 5747495 2128098..2128436 1 NC_010002.1 KEGG: sit:TM1040_1689 hypothetical protein; hypothetical protein 2128436 5747495 Daci_1937 Delftia acidovorans SPH-1 hypothetical protein YP_001562962.1 2128098 D 398578 CDS YP_001562963.1 160897381 5747496 2128433..2128765 1 NC_010002.1 hypothetical protein 2128765 5747496 Daci_1938 Delftia acidovorans SPH-1 hypothetical protein YP_001562963.1 2128433 D 398578 CDS YP_001562964.1 160897382 5747497 2128762..2129337 1 NC_010002.1 PFAM: Lambda NinG family protein; KEGG: pfl:PFL_3773 NinG protein; lambda NinG family protein 2129337 5747497 Daci_1939 Delftia acidovorans SPH-1 lambda NinG family protein YP_001562964.1 2128762 D 398578 CDS YP_001562965.1 160897383 5747498 2129351..2129737 1 NC_010002.1 ECF subfamily RNA polymerase sigma-24 factor 2129737 5747498 Daci_1940 Delftia acidovorans SPH-1 ECF subfamily RNA polymerase sigma-24 factor YP_001562965.1 2129351 D 398578 CDS YP_001562966.1 160897384 5747499 2130548..2131021 1 NC_010002.1 KEGG: ret:RHE_CH01092 putative terminase small subunit protein; putative terminase small subunit protein 2131021 5747499 Daci_1941 Delftia acidovorans SPH-1 putative terminase small subunit protein YP_001562966.1 2130548 D 398578 CDS YP_001562967.1 160897385 5747500 2131018..2132319 1 NC_010002.1 TIGRFAM: phage terminase, large subunit, PBSX family; KEGG: bhe:BH09390 phage related protein; PBSX family phage terminase large subunit 2132319 5747500 Daci_1942 Delftia acidovorans SPH-1 PBSX family phage terminase large subunit YP_001562967.1 2131018 D 398578 CDS YP_001562968.1 160897386 5747501 2132349..2134640 1 NC_010002.1 KEGG: smd:Smed_1838 hypothetical protein; hypothetical protein 2134640 5747501 Daci_1943 Delftia acidovorans SPH-1 hypothetical protein YP_001562968.1 2132349 D 398578 CDS YP_001562969.1 160897387 5747502 2134624..2134938 1 NC_010002.1 KEGG: bbt:BBta_5790 hypothetical protein; hypothetical protein 2134938 5747502 Daci_1944 Delftia acidovorans SPH-1 hypothetical protein YP_001562969.1 2134624 D 398578 CDS YP_001562970.1 160897388 5747503 2135126..2136061 1 NC_010002.1 KEGG: smd:Smed_1831 hypothetical protein; hypothetical protein 2136061 5747503 Daci_1945 Delftia acidovorans SPH-1 hypothetical protein YP_001562970.1 2135126 D 398578 CDS YP_001562971.1 160897389 5747504 2136096..2137016 1 NC_010002.1 KEGG: bbt:BBta_5785 putative phage major head protein; putative phage major head protein 2137016 5747504 Daci_1946 Delftia acidovorans SPH-1 putative phage major head protein YP_001562971.1 2136096 D 398578 CDS YP_001562972.1 160897390 5747505 2137056..2137487 1 NC_010002.1 hypothetical protein 2137487 5747505 Daci_1947 Delftia acidovorans SPH-1 hypothetical protein YP_001562972.1 2137056 D 398578 CDS YP_001562973.1 160897391 5747506 2137548..2137862 1 NC_010002.1 hypothetical protein 2137862 5747506 Daci_1948 Delftia acidovorans SPH-1 hypothetical protein YP_001562973.1 2137548 D 398578 CDS YP_001562974.1 160897392 5747507 2137862..2138173 1 NC_010002.1 hypothetical protein 2138173 5747507 Daci_1949 Delftia acidovorans SPH-1 hypothetical protein YP_001562974.1 2137862 D 398578 CDS YP_001562975.1 160897393 5747508 2138170..2138787 1 NC_010002.1 KEGG: zmo:ZMO0389 constituent protein; hypothetical protein 2138787 5747508 Daci_1950 Delftia acidovorans SPH-1 hypothetical protein YP_001562975.1 2138170 D 398578 CDS YP_001562976.1 160897394 5747509 2138789..2139853 1 NC_010002.1 KEGG: cel:H02F09.3 H02F09.3; hypothetical protein 2139853 5747509 Daci_1951 Delftia acidovorans SPH-1 hypothetical protein YP_001562976.1 2138789 D 398578 CDS YP_001562977.1 160897395 5747510 2140716..2141087 1 NC_010002.1 hypothetical protein 2141087 5747510 Daci_1952 Delftia acidovorans SPH-1 hypothetical protein YP_001562977.1 2140716 D 398578 CDS YP_001562978.1 160897396 5747511 2141129..2142673 1 NC_010002.1 hypothetical protein 2142673 5747511 Daci_1953 Delftia acidovorans SPH-1 hypothetical protein YP_001562978.1 2141129 D 398578 CDS YP_001562979.1 160897397 5747512 2142673..2142918 1 NC_010002.1 hypothetical protein 2142918 5747512 Daci_1954 Delftia acidovorans SPH-1 hypothetical protein YP_001562979.1 2142673 D 398578 CDS YP_001562980.1 160897398 5747513 2142927..2143937 1 NC_010002.1 KEGG: ddi:DDBDRAFT_0188625 hypothetical protein; hypothetical protein 2143937 5747513 Daci_1955 Delftia acidovorans SPH-1 hypothetical protein YP_001562980.1 2142927 D 398578 CDS YP_001562981.1 160897399 5747514 2144018..2144293 1 NC_010002.1 hypothetical protein 2144293 5747514 Daci_1956 Delftia acidovorans SPH-1 hypothetical protein YP_001562981.1 2144018 D 398578 CDS YP_001562982.1 160897400 5747515 2144295..2145095 1 NC_010002.1 KEGG: mul:MUL_3292 PE-PGRS family protein; hypothetical protein 2145095 5747515 Daci_1957 Delftia acidovorans SPH-1 hypothetical protein YP_001562982.1 2144295 D 398578 CDS YP_001562983.1 160897401 5747516 2145095..2146600 1 NC_010002.1 hypothetical protein 2146600 5747516 Daci_1958 Delftia acidovorans SPH-1 hypothetical protein YP_001562983.1 2145095 D 398578 CDS YP_001562984.1 160897402 5747517 2146600..2148747 1 NC_010002.1 KEGG: bpd:BURPS668_A2339 hypothetical protein; hypothetical protein 2148747 5747517 Daci_1959 Delftia acidovorans SPH-1 hypothetical protein YP_001562984.1 2146600 D 398578 CDS YP_001562985.1 160897403 5747518 2148894..2149316 1 NC_010002.1 KEGG: mms:mma_2193 hypothetical protein; hypothetical protein 2149316 5747518 Daci_1960 Delftia acidovorans SPH-1 hypothetical protein YP_001562985.1 2148894 D 398578 CDS YP_001562986.1 160897404 5747519 2149385..2149702 1 NC_010002.1 hypothetical protein 2149702 5747519 Daci_1961 Delftia acidovorans SPH-1 hypothetical protein YP_001562986.1 2149385 D 398578 CDS YP_001562987.1 160897405 5747520 complement(2149703..2150275) 1 NC_010002.1 PFAM: HNH endonuclease; KEGG: gfo:GFO_2427 HNH endonuclease family protein; HNH endonuclease 2150275 5747520 Daci_1962 Delftia acidovorans SPH-1 HNH endonuclease YP_001562987.1 2149703 R 398578 CDS YP_001562988.1 160897406 5747521 2150287..2150793 1 NC_010002.1 PFAM: protein of unknown function DUF847; KEGG: abu:Abu_1684 hypothetical protein; hypothetical protein 2150793 5747521 Daci_1963 Delftia acidovorans SPH-1 hypothetical protein YP_001562988.1 2150287 D 398578 CDS YP_001562989.1 160897407 5747522 2150790..2151233 1 NC_010002.1 KEGG: mpt:Mpe_A1850 hypothetical protein; hypothetical protein 2151233 5747522 Daci_1964 Delftia acidovorans SPH-1 hypothetical protein YP_001562989.1 2150790 D 398578 CDS YP_001562990.1 160897408 5747523 2151542..2152009 1 NC_010002.1 hypothetical protein 2152009 5747523 Daci_1965 Delftia acidovorans SPH-1 hypothetical protein YP_001562990.1 2151542 D 398578 CDS YP_001562991.1 160897409 5747524 2152251..2152685 1 NC_010002.1 hypothetical protein 2152685 5747524 Daci_1966 Delftia acidovorans SPH-1 hypothetical protein YP_001562991.1 2152251 D 398578 CDS YP_001562992.1 160897410 5747525 complement(2153150..2153278) 1 NC_010002.1 hypothetical protein 2153278 5747525 Daci_1967 Delftia acidovorans SPH-1 hypothetical protein YP_001562992.1 2153150 R 398578 CDS YP_001562993.1 160897411 5747526 complement(2153336..2153617) 1 NC_010002.1 PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: aav:Aave_1150 histone family protein nucleoid-structuring protein H-NS; histone family protein nucleoid-structuring protein H-NS 2153617 5747526 Daci_1968 Delftia acidovorans SPH-1 histone family protein nucleoid-structuring protein H-NS YP_001562993.1 2153336 R 398578 CDS YP_001562994.1 160897412 5747527 complement(2153752..2154111) 1 NC_010002.1 hypothetical protein 2154111 5747527 Daci_1969 Delftia acidovorans SPH-1 hypothetical protein YP_001562994.1 2153752 R 398578 CDS YP_001562995.1 160897413 5747528 complement(2154263..2154613) 1 NC_010002.1 KEGG: azo:azo1773 hypothetical protein; hypothetical protein 2154613 5747528 Daci_1970 Delftia acidovorans SPH-1 hypothetical protein YP_001562995.1 2154263 R 398578 CDS YP_001562996.1 160897414 5747529 complement(2154743..2155099) 1 NC_010002.1 PFAM: PRC-barrel domain protein; KEGG: sal:Sala_1396 PRC-barrel; PRC-barrel domain-containing protein 2155099 5747529 Daci_1971 Delftia acidovorans SPH-1 PRC-barrel domain-containing protein YP_001562996.1 2154743 R 398578 CDS YP_001562997.1 160897415 5747530 2155503..2155880 1 NC_010002.1 KEGG: pna:Pnap_3624 hypothetical protein; hypothetical protein 2155880 5747530 Daci_1972 Delftia acidovorans SPH-1 hypothetical protein YP_001562997.1 2155503 D 398578 CDS YP_001562998.1 160897416 5747531 2155981..2156331 1 NC_010002.1 PFAM: protein of unknown function DUF1304; KEGG: mpt:Mpe_A3500 hypothetical protein; hypothetical protein 2156331 5747531 Daci_1973 Delftia acidovorans SPH-1 hypothetical protein YP_001562998.1 2155981 D 398578 CDS YP_001562999.1 160897417 5747532 complement(2156365..2156991) 1 NC_010002.1 KEGG: pna:Pnap_3588 hypothetical protein; hypothetical protein 2156991 5747532 Daci_1974 Delftia acidovorans SPH-1 hypothetical protein YP_001562999.1 2156365 R 398578 CDS YP_001563000.1 160897418 5747533 complement(2157006..2157812) 1 NC_010002.1 KEGG: pna:Pnap_3592 hypothetical protein; hypothetical protein 2157812 5747533 Daci_1975 Delftia acidovorans SPH-1 hypothetical protein YP_001563000.1 2157006 R 398578 CDS YP_001563001.1 160897419 5747534 complement(2157809..2158264) 1 NC_010002.1 hypothetical protein 2158264 5747534 Daci_1976 Delftia acidovorans SPH-1 hypothetical protein YP_001563001.1 2157809 R 398578 CDS YP_001563002.1 160897420 5747535 complement(2158291..2158911) 1 NC_010002.1 hypothetical protein 2158911 5747535 Daci_1977 Delftia acidovorans SPH-1 hypothetical protein YP_001563002.1 2158291 R 398578 CDS YP_001563003.1 160897421 5747536 complement(2158911..2159522) 1 NC_010002.1 KEGG: pna:Pnap_3588 hypothetical protein; hypothetical protein 2159522 5747536 Daci_1978 Delftia acidovorans SPH-1 hypothetical protein YP_001563003.1 2158911 R 398578 CDS YP_001563004.1 160897422 5747537 complement(2159596..2161947) 1 NC_010002.1 KEGG: pna:Pnap_3593 hypothetical protein; hypothetical protein 2161947 5747537 Daci_1979 Delftia acidovorans SPH-1 hypothetical protein YP_001563004.1 2159596 R 398578 CDS YP_001563005.1 160897423 5747538 complement(2162938..2164599) 1 NC_010002.1 KEGG: bbr:BB1921 putative 4-hydroxythreonine-4-phosphate dehydrogenase; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; 4-hydroxythreonine-4-phosphate dehydrogenase 2164599 5747538 Daci_1980 Delftia acidovorans SPH-1 4-hydroxythreonine-4-phosphate dehydrogenase YP_001563005.1 2162938 R 398578 CDS YP_001563006.1 160897424 5747539 2164772..2165710 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_5693 transcriptional regulator, LysR family; LysR family transcriptional regulator 2165710 5747539 Daci_1981 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001563006.1 2164772 D 398578 CDS YP_001563007.1 160897425 5747540 complement(2165728..2166639) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_B0865 transcriptional regulator, LysR-family; LysR family transcriptional regulator 2166639 5747540 Daci_1982 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001563007.1 2165728 R 398578 CDS YP_001563008.1 160897426 5747541 2166782..2166988 1 NC_010002.1 KEGG: reh:H16_B0866 hypothetical protein; hypothetical protein 2166988 5747541 Daci_1983 Delftia acidovorans SPH-1 hypothetical protein YP_001563008.1 2166782 D 398578 CDS YP_001563009.1 160897427 5747542 2167002..2168384 1 NC_010002.1 PFAM: Na+/solute symporter; KEGG: reh:H16_B0867 APC transporter, SSS family; Na+/solute symporter 2168384 5747542 Daci_1984 Delftia acidovorans SPH-1 Na+/solute symporter YP_001563009.1 2167002 D 398578 CDS YP_001563010.1 160897428 5747543 2168398..2170062 1 NC_010002.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: reh:H16_B0868 metal-dependent hydrolase; amidohydrolase 3 2170062 5747543 Daci_1985 Delftia acidovorans SPH-1 amidohydrolase 3 YP_001563010.1 2168398 D 398578 CDS YP_001563011.1 160897429 5747544 2170059..2171069 1 NC_010002.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: reh:H16_B0869 hypothetical protein; cobalamin synthesis protein P47K 2171069 5747544 Daci_1986 Delftia acidovorans SPH-1 cobalamin synthesis protein P47K YP_001563011.1 2170059 D 398578 CDS YP_001563012.1 160897430 5747546 complement(2171269..2172255) 1 NC_010002.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; KEGG: rme:Rmet_5665 NmrA-like protein; NAD-dependent epimerase/dehydratase 2172255 5747546 Daci_1987 Delftia acidovorans SPH-1 NAD-dependent epimerase/dehydratase YP_001563012.1 2171269 R 398578 CDS YP_001563013.1 160897431 5747547 2172342..2173250 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rme:Rmet_5666 transcriptional regulator, LysR family; LysR family transcriptional regulator 2173250 5747547 Daci_1988 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001563013.1 2172342 D 398578 CDS YP_001563014.1 160897432 5747548 complement(2173270..2173479) 1 NC_010002.1 hypothetical protein 2173479 5747548 Daci_1989 Delftia acidovorans SPH-1 hypothetical protein YP_001563014.1 2173270 R 398578 CDS YP_001563015.1 160897433 5747549 complement(2173722..2174768) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: pol:Bpro_2038 conserved hypothetical protein 698; hypothetical protein 2174768 5747549 Daci_1990 Delftia acidovorans SPH-1 hypothetical protein YP_001563015.1 2173722 R 398578 CDS YP_001563016.1 160897434 5747550 complement(2174765..2175739) 1 NC_010002.1 PFAM: phosphate acetyl/butaryl transferase; KEGG: acr:Acry_3031 phosphate butyryltransferase; phosphate butyryltransferase 2175739 5747550 Daci_1991 Delftia acidovorans SPH-1 phosphate butyryltransferase YP_001563016.1 2174765 R 398578 CDS YP_001563017.1 160897435 5747551 complement(2175963..2177774) 1 NC_010002.1 catalyzes the formation of acetyl phosphate and sulfite from 2-sulfoacetaldehyde; is active when grown on taurine as a sole carbon source; sulfoacetaldehyde acetyltransferase 2177774 5747551 Daci_1992 Delftia acidovorans SPH-1 sulfoacetaldehyde acetyltransferase YP_001563017.1 2175963 R 398578 CDS YP_001563018.1 160897436 5747552 2177906..2178733 1 NC_010002.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: reu:Reut_B3754 regulatory protein, IclR; IclR family transcriptional regulator 2178733 5747552 Daci_1993 Delftia acidovorans SPH-1 IclR family transcriptional regulator YP_001563018.1 2177906 D 398578 CDS YP_001563019.1 160897437 5747553 2178726..2179703 1 NC_010002.1 KEGG: reu:Reut_B3755 putative MoxR-like ATPase; PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; cobaltochelatase 2179703 5747553 Daci_1994 Delftia acidovorans SPH-1 cobaltochelatase YP_001563019.1 2178726 D 398578 CDS YP_001563020.1 160897438 5747554 2179693..2181384 1 NC_010002.1 PFAM: Cobalt chelatase CobT subunit; KEGG: reu:Reut_B3756 CobT protein; cobaltochelatase 2181384 5747554 Daci_1995 Delftia acidovorans SPH-1 cobaltochelatase YP_001563020.1 2179693 D 398578 CDS YP_001563021.1 160897439 5747555 complement(2181479..2182243) 1 NC_010002.1 PFAM: alpha/beta hydrolase fold; KEGG: pna:Pnap_2121 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 2182243 5747555 Daci_1996 Delftia acidovorans SPH-1 alpha/beta hydrolase fold protein YP_001563021.1 2181479 R 398578 CDS YP_001563022.1 160897440 5747556 2182347..2182715 1 NC_010002.1 KEGG: vei:Veis_4741 hypothetical protein; hypothetical protein 2182715 5747556 Daci_1997 Delftia acidovorans SPH-1 hypothetical protein YP_001563022.1 2182347 D 398578 CDS YP_001563023.1 160897441 5747557 2182840..2183505 1 NC_010002.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; electron transport protein SCO1/SenC; KEGG: mpt:Mpe_A3172 putative lipoprotein; electron transport protein SCO1/SenC 2183505 5747557 Daci_1998 Delftia acidovorans SPH-1 electron transport protein SCO1/SenC YP_001563023.1 2182840 D 398578 CDS YP_001563024.1 160897442 5747558 2183734..2185572 1 NC_010002.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bja:blr0364 hypothetical protein; diguanylate cyclase 2185572 5747558 Daci_1999 Delftia acidovorans SPH-1 diguanylate cyclase YP_001563024.1 2183734 D 398578 CDS YP_001563025.1 160897443 5747559 complement(2185636..2186403) 1 NC_010002.1 KEGG: hch:HCH_00928 hypothetical protein; hypothetical protein 2186403 5747559 Daci_2000 Delftia acidovorans SPH-1 hypothetical protein YP_001563025.1 2185636 R 398578 CDS YP_001563026.1 160897444 5747560 complement(2186426..2186953) 1 NC_010002.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: aav:Aave_2532 protein tyrosine phosphatase; protein tyrosine phosphatase 2186953 5747560 Daci_2001 Delftia acidovorans SPH-1 protein tyrosine phosphatase YP_001563026.1 2186426 R 398578 CDS YP_001563027.1 160897445 5747561 2187593..2188276 1 NC_010002.1 hypothetical protein 2188276 5747561 Daci_2002 Delftia acidovorans SPH-1 hypothetical protein YP_001563027.1 2187593 D 398578 CDS YP_001563028.1 160897446 5747562 complement(2188318..2188659) 1 NC_010002.1 TIGRFAM: nitrite reductase [NAD(P)H], small subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: azo:azo1176 nitrite reductase small subunit, probable; nitrite reductase (NAD(P)H) small subunit 2188659 5747562 Daci_2003 Delftia acidovorans SPH-1 nitrite reductase (NAD(P)H) small subunit YP_001563028.1 2188318 R 398578 CDS YP_001563029.1 160897447 5747563 complement(2188708..2191224) 1 NC_010002.1 TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: azo:azo1175 nitrite reductase (NAD(P)H) large subunit,probable; nitrite reductase (NAD(P)H) large subunit 2191224 5747563 Daci_2004 Delftia acidovorans SPH-1 nitrite reductase (NAD(P)H) large subunit YP_001563029.1 2188708 R 398578 CDS YP_001563030.1 160897448 5747564 complement(2191476..2192483) 1 NC_010002.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: reh:H16_B2519 transcriptional regulator; AraC family transcriptional regulator 2192483 5747564 Daci_2005 Delftia acidovorans SPH-1 AraC family transcriptional regulator YP_001563030.1 2191476 R 398578 CDS YP_001563031.1 160897449 5747565 2192646..2193494 1 NC_010002.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: bam:Bamb_1586 taurine dioxygenase; taurine dioxygenase 2193494 5747565 Daci_2006 Delftia acidovorans SPH-1 taurine dioxygenase YP_001563031.1 2192646 D 398578 CDS YP_001563032.1 160897450 5747566 2193524..2194582 1 NC_010002.1 PFAM: protein of unknown function DUF849; KEGG: reu:Reut_B3902 protein of unknown function DUF849, prokaryotic; hypothetical protein 2194582 5747566 Daci_2007 Delftia acidovorans SPH-1 hypothetical protein YP_001563032.1 2193524 D 398578 CDS YP_001563033.1 160897451 5747567 2194597..2195565 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: reu:Reut_C6081 hypothetical protein; hypothetical protein 2195565 5747567 Daci_2008 Delftia acidovorans SPH-1 hypothetical protein YP_001563033.1 2194597 D 398578 CDS YP_001563034.1 160897452 5747568 2195605..2196576 1 NC_010002.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: reu:Reut_B3840 zinc-containing alcohol dehydrogenase superfamily; alcohol dehydrogenase 2196576 5747568 Daci_2009 Delftia acidovorans SPH-1 alcohol dehydrogenase YP_001563034.1 2195605 D 398578 CDS YP_001563035.1 160897453 5747569 2196589..2197671 1 NC_010002.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rme:Rmet_4629 transcriptional regulator, AraC family; AraC family transcriptional regulator 2197671 5747569 Daci_2010 Delftia acidovorans SPH-1 AraC family transcriptional regulator YP_001563035.1 2196589 D 398578 CDS YP_001563036.1 160897454 5747570 complement(2197676..2198734) 1 NC_010002.1 PFAM: protein of unknown function DUF849; KEGG: reh:H16_B1005 hypothetical protein; hypothetical protein 2198734 5747570 Daci_2011 Delftia acidovorans SPH-1 hypothetical protein YP_001563036.1 2197676 R 398578 CDS YP_001563037.1 160897455 5747571 complement(2198793..2199638) 1 NC_010002.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: reu:Reut_A1602 taurine dioxygenase; taurine dioxygenase 2199638 5747571 Daci_2012 Delftia acidovorans SPH-1 taurine dioxygenase YP_001563037.1 2198793 R 398578 CDS YP_001563038.1 160897456 5747572 complement(2199659..2200627) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: reu:Reut_B3854 hypothetical protein; hypothetical protein 2200627 5747572 Daci_2013 Delftia acidovorans SPH-1 hypothetical protein YP_001563038.1 2199659 R 398578 CDS YP_001563039.1 160897457 5747573 2200730..2202094 1 NC_010002.1 KEGG: vei:Veis_4644 porin, gram-negative type; porin 2202094 5747573 Daci_2014 Delftia acidovorans SPH-1 porin YP_001563039.1 2200730 D 398578 CDS YP_001563040.1 160897458 5747574 2202179..2204713 1 NC_010002.1 PFAM: protein of unknown function DUF214; KEGG: aav:Aave_3824 protein of unknown function DUF214; hypothetical protein 2204713 5747574 Daci_2015 Delftia acidovorans SPH-1 hypothetical protein YP_001563040.1 2202179 D 398578 CDS YP_001563041.1 160897459 5747575 complement(2205528..2206421) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A3311 transcriptional regulator, LysR family; LysR family transcriptional regulator 2206421 5747575 Daci_2016 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001563041.1 2205528 R 398578 CDS YP_001563042.1 160897460 5747576 2206615..2208165 1 NC_010002.1 PFAM: major facilitator superfamily MFS_1; KEGG: mlo:mlr2785 probable integral membrane efflux protein; major facilitator transporter 2208165 5747576 Daci_2017 Delftia acidovorans SPH-1 major facilitator transporter YP_001563042.1 2206615 D 398578 CDS YP_001563043.1 160897461 5747577 2208205..2208606 1 NC_010002.1 PFAM: globin; KEGG: ajs:Ajs_3454 globin; globin 2208606 5747577 Daci_2018 Delftia acidovorans SPH-1 globin YP_001563043.1 2208205 D 398578 CDS YP_001563044.1 160897462 5747578 complement(2208687..2210108) 1 NC_010002.1 PFAM: FAD dependent oxidoreductase; KEGG: bxe:Bxe_B0685 putative taurine dehydrogenase, large subunit; FAD dependent oxidoreductase 2210108 5747578 Daci_2019 Delftia acidovorans SPH-1 FAD dependent oxidoreductase YP_001563044.1 2208687 R 398578 CDS YP_001563045.1 160897463 5747579 2210444..2210842 1 NC_010002.1 PFAM: protein of unknown function DUF1486; KEGG: reh:H16_B1892 hypothetical protein; hypothetical protein 2210842 5747579 Daci_2020 Delftia acidovorans SPH-1 hypothetical protein YP_001563045.1 2210444 D 398578 CDS YP_001563046.1 160897464 5747580 2210967..2212409 1 NC_010002.1 PFAM: Spore germination protein; amino acid permease-associated region; KEGG: reu:Reut_B3753 amino acid permease-associated region; amino acid permease-associated protein 2212409 5747580 Daci_2021 Delftia acidovorans SPH-1 amino acid permease-associated protein YP_001563046.1 2210967 D 398578 CDS YP_001563047.1 160897465 5747581 complement(2212457..2213986) 1 NC_010002.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: reh:H16_B1891 transcriptional regulator, MocR family; transcriptional regulator 2213986 5747581 Daci_2022 Delftia acidovorans SPH-1 transcriptional regulator YP_001563047.1 2212457 R 398578 CDS YP_001563048.1 160897466 5747584 2214610..2215176 1 NC_010002.1 TIGRFAM: transcription elongation factor GreB; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: ajs:Ajs_0950 transcription elongation factor GreB; transcription elongation factor GreB 2215176 5747584 Daci_2023 Delftia acidovorans SPH-1 transcription elongation factor GreB YP_001563048.1 2214610 D 398578 CDS YP_001563049.1 160897467 5747585 complement(2215181..2216554) 1 NC_010002.1 TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: aav:Aave_3237 lytic murein transglycosylase; lytic murein transglycosylase 2216554 5747585 Daci_2024 Delftia acidovorans SPH-1 lytic murein transglycosylase YP_001563049.1 2215181 R 398578 CDS YP_001563050.1 160897468 5747586 2216641..2217507 1 NC_010002.1 PFAM: Silent information regulator protein Sir2; KEGG: ajs:Ajs_1839 silent information regulator protein Sir2; silent information regulator protein Sir2 2217507 5747586 Daci_2025 Delftia acidovorans SPH-1 silent information regulator protein Sir2 YP_001563050.1 2216641 D 398578 CDS YP_001563051.1 160897469 5747587 complement(2217535..2219802) 1 NC_010002.1 KEGG: aav:Aave_3585 (p)ppGpp synthetase I, SpoT/RelA; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase HD region; (p)ppGpp synthetase I SpoT/RelA 2219802 5747587 Daci_2026 Delftia acidovorans SPH-1 (p)ppGpp synthetase I SpoT/RelA YP_001563051.1 2217535 R 398578 CDS YP_001563052.1 160897470 5747588 complement(2219904..2220107) 1 NC_010002.1 Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 2220107 5747588 Daci_2027 Delftia acidovorans SPH-1 DNA-directed RNA polymerase subunit omega YP_001563052.1 2219904 R 398578 CDS YP_001563053.1 160897471 5747589 complement(2220126..2220788) 1 NC_010002.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 2220788 gmk 5747589 gmk Delftia acidovorans SPH-1 guanylate kinase YP_001563053.1 2220126 R 398578 CDS YP_001563054.1 160897472 5747590 complement(2220800..2221708) 1 NC_010002.1 PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: ajs:Ajs_0926 domain of unknown function DUF1732; hypothetical protein 2221708 5747590 Daci_2029 Delftia acidovorans SPH-1 hypothetical protein YP_001563054.1 2220800 R 398578 CDS YP_001563055.1 160897473 5747591 2221783..2222814 1 NC_010002.1 PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: ajs:Ajs_0925 protein kinase; serine/threonine protein kinase 2222814 5747591 Daci_2030 Delftia acidovorans SPH-1 serine/threonine protein kinase YP_001563055.1 2221783 D 398578 CDS YP_001563056.1 160897474 5747592 2222811..2223716 1 NC_010002.1 PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: ajs:Ajs_0924 protein phosphatase 2C domain protein; protein serine/threonine phosphatase 2223716 5747592 Daci_2031 Delftia acidovorans SPH-1 protein serine/threonine phosphatase YP_001563056.1 2222811 D 398578 CDS YP_001563057.1 160897475 5747593 2223816..2224418 1 NC_010002.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; putative deoxyribonucleotide triphosphate pyrophosphatase 2224418 5747593 Daci_2032 Delftia acidovorans SPH-1 putative deoxyribonucleotide triphosphate pyrophosphatase YP_001563057.1 2223816 D 398578 CDS YP_001563058.1 160897476 5747594 2224415..2225659 1 NC_010002.1 KEGG: aav:Aave_3577 putative oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase 2225659 5747594 Daci_2033 Delftia acidovorans SPH-1 oxygen-independent coproporphyrinogen III oxidase YP_001563058.1 2224415 D 398578 CDS YP_001563059.1 160897477 5747595 complement(2225738..2226088) 1 NC_010002.1 KEGG: vei:Veis_4154 hypothetical protein; hypothetical protein 2226088 5747595 Daci_2034 Delftia acidovorans SPH-1 hypothetical protein YP_001563059.1 2225738 R 398578 CDS YP_001563060.1 160897478 5747596 complement(2226240..2227841) 1 NC_010002.1 PFAM: Sporulation domain protein; KEGG: aav:Aave_3575 sporulation domain protein; sporulation domain-containing protein 2227841 5747596 Daci_2035 Delftia acidovorans SPH-1 sporulation domain-containing protein YP_001563060.1 2226240 R 398578 CDS YP_001563061.1 160897479 5747597 complement(2227992..2229308) 1 NC_010002.1 KEGG: bxe:Bxe_A2724 fumarylacetoacetase (HmgB); TIGRFAM: fumarylacetoacetase; PFAM: fumarylacetoacetate (FAA) hydrolase; Domain of unknown function DUF1969; fumarylacetoacetase 2229308 5747597 Daci_2036 Delftia acidovorans SPH-1 fumarylacetoacetase YP_001563061.1 2227992 R 398578 CDS YP_001563062.1 160897480 5747598 complement(2229383..2230201) 1 NC_010002.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: psa:PST_0861 3-hydroxybutyrate dehydrogenase; short-chain dehydrogenase/reductase SDR 2230201 5747598 Daci_2037 Delftia acidovorans SPH-1 short-chain dehydrogenase/reductase SDR YP_001563062.1 2229383 R 398578 CDS YP_001563063.1 160897481 5747599 complement(2230198..2230941) 1 NC_010002.1 PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: bbr:BB4038 putative transcriptional regulator; GntR family transcriptional regulator 2230941 5747599 Daci_2038 Delftia acidovorans SPH-1 GntR family transcriptional regulator YP_001563063.1 2230198 R 398578 CDS YP_001563064.1 160897482 5747600 2231131..2233362 1 NC_010002.1 KEGG: aav:Aave_2994 hypothetical protein; hypothetical protein 2233362 5747600 Daci_2039 Delftia acidovorans SPH-1 hypothetical protein YP_001563064.1 2231131 D 398578 CDS YP_001563065.1 160897483 5747601 2233435..2234550 1 NC_010002.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 2234550 5747601 Daci_2040 Delftia acidovorans SPH-1 phospho-2-dehydro-3-deoxyheptonate aldolase YP_001563065.1 2233435 D 398578 CDS YP_001563066.1 160897484 5747602 2235004..2236305 1 NC_010002.1 PFAM: multi antimicrobial extrusion protein MatE; multi anti extrusion protein MatE 2236305 5747602 Daci_2041 Delftia acidovorans SPH-1 multi anti extrusion protein MatE YP_001563066.1 2235004 D 398578 CDS YP_001563067.1 160897485 5747603 complement(2236412..2236867) 1 NC_010002.1 KEGG: fal:FRAAL3454 hypothetical protein; aromatic catabolism protein-like protein 2236867 5747603 Daci_2042 Delftia acidovorans SPH-1 aromatic catabolism protein-like protein YP_001563067.1 2236412 R 398578 CDS YP_001563068.1 160897486 5747604 complement(2236860..2237327) 1 NC_010002.1 PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: gur:Gura_3524 putative transcriptional regulator, MerR family; MerR family transcriptional regulator 2237327 5747604 Daci_2043 Delftia acidovorans SPH-1 MerR family transcriptional regulator YP_001563068.1 2236860 R 398578 CDS YP_001563069.1 160897487 5747605 complement(2237410..2238192) 1 NC_010002.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rso:RSc2321 probable dehydrogenase/reductase oxidoreductase protein; short-chain dehydrogenase/reductase SDR 2238192 5747605 Daci_2044 Delftia acidovorans SPH-1 short-chain dehydrogenase/reductase SDR YP_001563069.1 2237410 R 398578 CDS YP_001563070.1 160897488 5747606 2238259..2239194 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: afw:Anae109_2895 transcriptional regulator, LysR family; LysR family transcriptional regulator 2239194 5747606 Daci_2045 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001563070.1 2238259 D 398578 CDS YP_001563071.1 160897489 5747607 complement(2239245..2240093) 1 NC_010002.1 Hsp31 stabilizes early unfolding protein intermediates under severe heat stress; chaperone protein HchA 2240093 5747607 Daci_2046 Delftia acidovorans SPH-1 chaperone protein HchA YP_001563071.1 2239245 R 398578 CDS YP_001563072.1 160897490 5747608 complement(2240343..2240681) 1 NC_010002.1 KEGG: aav:Aave_3790 transposase, IS4 family protein; transposase, IS4 family protein 2240681 5747608 Daci_2047 Delftia acidovorans SPH-1 transposase, IS4 family protein YP_001563072.1 2240343 R 398578 CDS YP_001563073.1 160897491 5747609 complement(2240741..2241166) 1 NC_010002.1 KEGG: aav:Aave_3789 putative TIS1421-transposase orfA protein; putative TIS1421-transposase orfA protein 2241166 5747609 Daci_2048 Delftia acidovorans SPH-1 putative TIS1421-transposase orfA protein YP_001563073.1 2240741 R 398578 CDS YP_001563074.1 160897492 5747610 2243436..2243942 1 NC_010002.1 hypothetical protein 2243942 5747610 Daci_2049 Delftia acidovorans SPH-1 hypothetical protein YP_001563074.1 2243436 D 398578 CDS YP_001563075.1 160897493 5747611 2243968..2244282 1 NC_010002.1 PFAM: regulatory protein ArsR; KEGG: sme:SMc03843 putative transcription regulator protein; ArsR family transcriptional regulator 2244282 5747611 Daci_2050 Delftia acidovorans SPH-1 ArsR family transcriptional regulator YP_001563075.1 2243968 D 398578 CDS YP_001563076.1 160897494 5747612 2244279..2244635 1 NC_010002.1 KEGG: sme:SMc03842 hypothetical protein; hypothetical protein 2244635 5747612 Daci_2051 Delftia acidovorans SPH-1 hypothetical protein YP_001563076.1 2244279 D 398578 CDS YP_001563077.1 160897495 5747613 2244742..2245347 1 NC_010002.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 2245347 clpP 5747613 clpP Delftia acidovorans SPH-1 ATP-dependent Clp protease proteolytic subunit YP_001563077.1 2244742 D 398578 CDS YP_001563078.1 160897496 5747614 complement(2245718..2246683) 1 NC_010002.1 PFAM: DNA/RNA non-specific endonuclease; KEGG: pol:Bpro_5192 DNA/RNA non-specific endonuclease; DNA/RNA non-specific endonuclease 2246683 5747614 Daci_2053 Delftia acidovorans SPH-1 DNA/RNA non-specific endonuclease YP_001563078.1 2245718 R 398578 CDS YP_001563079.1 160897497 5747615 complement(2246824..2248035) 1 NC_010002.1 PFAM: major facilitator superfamily MFS_1; KEGG: xac:XAC0229 MFS transporter; major facilitator transporter 2248035 5747615 Daci_2054 Delftia acidovorans SPH-1 major facilitator transporter YP_001563079.1 2246824 R 398578 CDS YP_001563080.1 160897498 5747616 complement(2248047..2248394) 1 NC_010002.1 PFAM: protein of unknown function DUF486; KEGG: mes:Meso_1652 protein of unknown function DUF486; hypothetical protein 2248394 5747616 Daci_2055 Delftia acidovorans SPH-1 hypothetical protein YP_001563080.1 2248047 R 398578 CDS YP_001563081.1 160897499 5747617 complement(2248532..2249191) 1 NC_010002.1 KEGG: aav:Aave_0171 putative secreted protein; hypothetical protein 2249191 5747617 Daci_2056 Delftia acidovorans SPH-1 hypothetical protein YP_001563081.1 2248532 R 398578 CDS YP_001563082.1 160897500 5747618 complement(2249383..2250729) 1 NC_010002.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: aav:Aave_0172 two component, sigma54 specific, transcriptional regulator, fis family; Fis family two component sigma-54-specific transcriptional regulator 2250729 5747618 Daci_2057 Delftia acidovorans SPH-1 Fis family two component sigma-54-specific transcriptional regulator YP_001563082.1 2249383 R 398578 CDS YP_001563083.1 160897501 5747619 complement(2250714..2252138) 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bvi:Bcep1808_6446 integral membrane sensor signal transduction histidine kinase; histidine kinase 2252138 5747619 Daci_2058 Delftia acidovorans SPH-1 histidine kinase YP_001563083.1 2250714 R 398578 CDS YP_001563084.1 160897502 5747620 2252301..2252996 1 NC_010002.1 hypothetical protein 2252996 5747620 Daci_2059 Delftia acidovorans SPH-1 hypothetical protein YP_001563084.1 2252301 D 398578 CDS YP_001563085.1 160897503 5747621 2253012..2254451 1 NC_010002.1 PFAM: EAL domain protein; KEGG: pfl:PFL_3819 EAL domain protein; diguanylate phosphodiesterase 2254451 5747621 Daci_2060 Delftia acidovorans SPH-1 diguanylate phosphodiesterase YP_001563085.1 2253012 D 398578 CDS YP_001563086.1 160897504 5747622 complement(2254495..2255751) 1 NC_010002.1 PFAM: glycosyl transferase group 1; KEGG: eba:ebA1793 putative glycosyl transferase; glycosyl transferase group 1 protein 2255751 5747622 Daci_2061 Delftia acidovorans SPH-1 glycosyl transferase group 1 protein YP_001563086.1 2254495 R 398578 CDS YP_001563087.1 160897505 5747623 complement(2255804..2257198) 1 NC_010002.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bxe:Bxe_A2790 sigma54 specific transcriptional regulator, fis family; sigma-54 dependent trancsriptional regulator 2257198 5747623 Daci_2062 Delftia acidovorans SPH-1 sigma-54 dependent trancsriptional regulator YP_001563087.1 2255804 R 398578 CDS YP_001563088.1 160897506 5747624 complement(2257249..2259537) 1 NC_010002.1 KEGG: bbr:BB1833 hypothetical protein; membrane protein 2259537 5747624 Daci_2063 Delftia acidovorans SPH-1 membrane protein YP_001563088.1 2257249 R 398578 CDS YP_001563089.1 160897507 5747625 complement(2259554..2260096) 1 NC_010002.1 PFAM: TadE family protein; KEGG: bpa:BPP2374 hypothetical protein; TadE family protein 2260096 5747625 Daci_2064 Delftia acidovorans SPH-1 TadE family protein YP_001563089.1 2259554 R 398578 CDS YP_001563090.1 160897508 5747626 complement(2260093..2260608) 1 NC_010002.1 PFAM: TadE family protein; KEGG: bmn:BMA10247_1050 TadE family protein; TadE family protein 2260608 5747626 Daci_2065 Delftia acidovorans SPH-1 TadE family protein YP_001563090.1 2260093 R 398578 CDS YP_001563091.1 160897509 5747627 complement(2260642..2261082) 1 NC_010002.1 hypothetical protein 2261082 5747627 Daci_2066 Delftia acidovorans SPH-1 hypothetical protein YP_001563091.1 2260642 R 398578 CDS YP_001563092.1 160897510 5747628 complement(2261093..2262124) 1 NC_010002.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bte:BTH_I2537 TPR domain protein; hypothetical protein 2262124 5747628 Daci_2067 Delftia acidovorans SPH-1 hypothetical protein YP_001563092.1 2261093 R 398578 CDS YP_001563093.1 160897511 5747629 complement(2262127..2263131) 1 NC_010002.1 PFAM: type II secretion system protein; KEGG: bam:Bamb_1407 type II secretion system protein; type II secretion system protein 2263131 5747629 Daci_2068 Delftia acidovorans SPH-1 type II secretion system protein YP_001563093.1 2262127 R 398578 CDS YP_001563094.1 160897512 5747630 complement(2263180..2264142) 1 NC_010002.1 PFAM: type II secretion system protein; KEGG: reh:H16_B0188 flp pilus assembly protein TadB; type II secretion system protein 2264142 5747630 Daci_2069 Delftia acidovorans SPH-1 type II secretion system protein YP_001563094.1 2263180 R 398578 CDS YP_001563095.1 160897513 5747631 complement(2264139..2265461) 1 NC_010002.1 PFAM: type II secretion system protein E; KEGG: bch:Bcen2424_1523 type II secretion system protein E; type II secretion system protein E 2265461 5747631 Daci_2070 Delftia acidovorans SPH-1 type II secretion system protein E YP_001563095.1 2264139 R 398578 CDS YP_001563096.1 160897514 5747632 complement(2265469..2266995) 1 NC_010002.1 KEGG: bvi:Bcep1808_1488 response regulator receiver protein; Flp pilus assembly protein ATPase CpaE-like protein 2266995 5747632 Daci_2071 Delftia acidovorans SPH-1 Flp pilus assembly protein ATPase CpaE-like protein YP_001563096.1 2265469 R 398578 CDS YP_001563097.1 160897515 5747633 complement(2267000..2268478) 1 NC_010002.1 PFAM: type II and III secretion system protein; KEGG: bvi:Bcep1808_1487 type II and III secretion system protein; type II and III secretion system protein 2268478 5747633 Daci_2072 Delftia acidovorans SPH-1 type II and III secretion system protein YP_001563097.1 2267000 R 398578 CDS YP_001563098.1 160897516 5747634 complement(2268504..2269595) 1 NC_010002.1 TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: reh:H16_B0184 flp pilus assembly protein CpaB; Flp pilus assembly protein CpaB 2269595 5747634 Daci_2073 Delftia acidovorans SPH-1 Flp pilus assembly protein CpaB YP_001563098.1 2268504 R 398578 CDS YP_001563099.1 160897517 5747635 complement(2269743..2270312) 1 NC_010002.1 PFAM: peptidase A24A prepilin type IV; KEGG: bam:Bamb_1400 peptidase A24A, prepilin type IV; peptidase A24A prepilin type IV 2270312 5747635 Daci_2074 Delftia acidovorans SPH-1 peptidase A24A prepilin type IV YP_001563099.1 2269743 R 398578 CDS YP_001563100.1 160897518 5747636 complement(2270315..2270491) 1 NC_010002.1 PFAM: Flp/Fap pilin component; KEGG: eba:ebD22 INTERPRO: probable Flp/Fap pilin component; Flp/Fap pilin component 2270491 5747636 Daci_2075 Delftia acidovorans SPH-1 Flp/Fap pilin component YP_001563100.1 2270315 R 398578 CDS YP_001563101.1 160897519 5747637 complement(2270583..2270789) 1 NC_010002.1 PFAM: Flp/Fap pilin component; KEGG: reh:H16_A0722 flp pilus assembly protein, pilin Flp; Flp/Fap pilin component 2270789 5747637 Daci_2076 Delftia acidovorans SPH-1 Flp/Fap pilin component YP_001563101.1 2270583 R 398578 CDS YP_001563102.1 160897520 5747638 complement(2270865..2272607) 1 NC_010002.1 PFAM: outer membrane efflux protein; KEGG: mag:amb3061 outer membrane protein; outer membrane efflux protein 2272607 5747638 Daci_2077 Delftia acidovorans SPH-1 outer membrane efflux protein YP_001563102.1 2270865 R 398578 CDS YP_001563103.1 160897521 5747639 complement(2272607..2273983) 1 NC_010002.1 TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: mag:amb3476 membrane-fusion protein; multidrug resistance efflux pump; HlyD family type I secretion membrane fusion protein 2273983 5747639 Daci_2078 Delftia acidovorans SPH-1 HlyD family type I secretion membrane fusion protein YP_001563103.1 2272607 R 398578 CDS YP_001563104.1 160897522 5747640 complement(2273980..2275851) 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mag:amb3475 ABC-type protease/lipase transport system, ATPase and permease components; ABC transporter-like protein 2275851 5747640 Daci_2079 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001563104.1 2273980 R 398578 CDS YP_001563105.1 160897523 5747641 complement(2275951..2279244) 1 NC_010002.1 PFAM: Mur ligase middle domain protein; KEGG: sit:TM1040_2019 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase; Mur ligase middle domain-containing protein 2279244 5747641 Daci_2080 Delftia acidovorans SPH-1 Mur ligase middle domain-containing protein YP_001563105.1 2275951 R 398578 CDS YP_001563106.1 160897524 5747642 complement(2279282..2279806) 1 NC_010002.1 PFAM: OmpA/MotB domain protein; KEGG: pol:Bpro_1985 OmpA/MotB; OmpA/MotB domain-containing protein 2279806 5747642 Daci_2081 Delftia acidovorans SPH-1 OmpA/MotB domain-containing protein YP_001563106.1 2279282 R 398578 CDS YP_001563107.1 160897525 5747643 complement(2279889..2285000) 1 NC_010002.1 KEGG: bcn:Bcen_6532 PE-PGRS family protein; hypothetical protein 2285000 5747643 Daci_2082 Delftia acidovorans SPH-1 hypothetical protein YP_001563107.1 2279889 R 398578 CDS YP_001563108.1 160897526 5747644 2285461..2286843 1 NC_010002.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: azo:azo1059 conserved hypothetical secreted protein; hypothetical protein 2286843 5747644 Daci_2083 Delftia acidovorans SPH-1 hypothetical protein YP_001563108.1 2285461 D 398578 CDS YP_001563109.1 160897527 5747645 2286843..2288342 1 NC_010002.1 KEGG: aav:Aave_2318 ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG protein 2288342 5747645 Daci_2084 Delftia acidovorans SPH-1 ErfK/YbiS/YcfS/YnhG protein YP_001563109.1 2286843 D 398578 CDS YP_001563110.1 160897528 5747646 complement(2288400..2288789) 1 NC_010002.1 KEGG: mms:mma_1685 hypothetical protein; hypothetical protein 2288789 5747646 Daci_2085 Delftia acidovorans SPH-1 hypothetical protein YP_001563110.1 2288400 R 398578 CDS YP_001563111.1 160897529 5747647 complement(2288918..2289994) 1 NC_010002.1 PFAM: regulatory protein GntR HTH; KEGG: psb:Psyr_3939 regulatory protein, GntR; GntR family transcriptional regulator 2289994 5747647 Daci_2086 Delftia acidovorans SPH-1 GntR family transcriptional regulator YP_001563111.1 2288918 R 398578 CDS YP_001563112.1 160897530 5747648 complement(2290059..2291249) 1 NC_010002.1 KEGG: pfl:PFL_1368 conserved hypothetical protein; hypothetical protein 2291249 5747648 Daci_2087 Delftia acidovorans SPH-1 hypothetical protein YP_001563112.1 2290059 R 398578 CDS YP_001563113.1 160897531 5747649 complement(2291273..2292367) 1 NC_010002.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: pst:PSPTO_4198 cobalamin synthesis protein/P47K family protein; cobalamin synthesis protein P47K 2292367 5747649 Daci_2088 Delftia acidovorans SPH-1 cobalamin synthesis protein P47K YP_001563113.1 2291273 R 398578 CDS YP_001563114.1 160897532 5747650 complement(2292900..2293658) 1 NC_010002.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pfl:PFL_1365 oxidoreductase, short chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR 2293658 5747650 Daci_2089 Delftia acidovorans SPH-1 short-chain dehydrogenase/reductase SDR YP_001563114.1 2292900 R 398578 CDS YP_001563115.1 160897533 5747651 complement(2293670..2294446) 1 NC_010002.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: psp:PSPPH_3932 glucose 1-dehydrogenase, putative; short-chain dehydrogenase/reductase SDR 2294446 5747651 Daci_2090 Delftia acidovorans SPH-1 short-chain dehydrogenase/reductase SDR YP_001563115.1 2293670 R 398578 CDS YP_001563116.1 160897534 5747652 complement(2294454..2295899) 1 NC_010002.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: psp:PSPPH_3933 major facilitator family transporter; major facilitator transporter 2295899 5747652 Daci_2091 Delftia acidovorans SPH-1 major facilitator transporter YP_001563116.1 2294454 R 398578 CDS YP_001563117.1 160897535 5747653 complement(2295928..2296803) 1 NC_010002.1 PFAM: polysaccharide deacetylase; KEGG: pfl:PFL_1362 polysaccharide deacetylase family protein; polysaccharide deacetylase 2296803 5747653 Daci_2092 Delftia acidovorans SPH-1 polysaccharide deacetylase YP_001563117.1 2295928 R 398578 CDS YP_001563118.1 160897536 5747654 complement(2296805..2298238) 1 NC_010002.1 PFAM: Amidase; KEGG: pfl:PFL_1361 amidase family protein; hypothetical protein 2298238 5747654 Daci_2093 Delftia acidovorans SPH-1 hypothetical protein YP_001563118.1 2296805 R 398578 CDS YP_001563119.1 160897537 5747655 2298499..2299026 1 NC_010002.1 hypothetical protein 2299026 5747655 Daci_2094 Delftia acidovorans SPH-1 hypothetical protein YP_001563119.1 2298499 D 398578 CDS YP_001563120.1 160897538 5747656 complement(2299051..2300583) 1 NC_010002.1 KEGG: har:HEAR2597 putative membrane protein; putative 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family; glycosyltransferase 2300583 5747656 Daci_2095 Delftia acidovorans SPH-1 glycosyltransferase YP_001563120.1 2299051 R 398578 CDS YP_001563121.1 160897539 5747657 complement(2300931..2301503) 1 NC_010002.1 PFAM: Resolvase domain; KEGG: bpd:BURPS668_2984 putative site-specific recombinases, DNA invertase Pin; resolvase domain-containing protein 2301503 5747657 Daci_2096 Delftia acidovorans SPH-1 resolvase domain-containing protein YP_001563121.1 2300931 R 398578 CDS YP_001563122.1 160897540 5747658 complement(2301747..2302772) 1 NC_010002.1 PFAM: Zonular occludens toxin; KEGG: ajs:Ajs_0719 Zonular occludens toxin; zonular occludens toxin 2302772 5747658 Daci_2097 Delftia acidovorans SPH-1 zonular occludens toxin YP_001563122.1 2301747 R 398578 CDS YP_001563123.1 160897541 5747659 complement(2302773..2303063) 1 NC_010002.1 KEGG: ajs:Ajs_0720 hypothetical protein; hypothetical protein 2303063 5747659 Daci_2098 Delftia acidovorans SPH-1 hypothetical protein YP_001563123.1 2302773 R 398578 CDS YP_001563124.1 160897542 5747660 complement(2303063..2303830) 1 NC_010002.1 KEGG: ajs:Ajs_0721 hypothetical protein; hypothetical protein 2303830 5747660 Daci_2099 Delftia acidovorans SPH-1 hypothetical protein YP_001563124.1 2303063 R 398578 CDS YP_001563125.1 160897543 5747661 complement(2303871..2304350) 1 NC_010002.1 KEGG: ajs:Ajs_0721 hypothetical protein; hypothetical protein 2304350 5747661 Daci_2100 Delftia acidovorans SPH-1 hypothetical protein YP_001563125.1 2303871 R 398578 CDS YP_001563126.1 160897544 5747662 complement(2304862..2305083) 1 NC_010002.1 hypothetical protein 2305083 5747662 Daci_2101 Delftia acidovorans SPH-1 hypothetical protein YP_001563126.1 2304862 R 398578 CDS YP_001563127.1 160897545 5747663 complement(2305412..2305732) 1 NC_010002.1 KEGG: ajs:Ajs_0723 conserved hypothetical protein, putative phage associated protein; putative phage associated protein 2305732 5747663 Daci_2102 Delftia acidovorans SPH-1 putative phage associated protein YP_001563127.1 2305412 R 398578 CDS YP_001563128.1 160897546 5747664 complement(2305753..2306859) 1 NC_010002.1 PFAM: replication initiation factor; KEGG: ajs:Ajs_0724 replication initiation factor; replication initiation factor 2306859 5747664 Daci_2103 Delftia acidovorans SPH-1 replication initiation factor YP_001563128.1 2305753 R 398578 CDS YP_001563129.1 160897547 5747665 complement(2307642..2307998) 1 NC_010002.1 KEGG: ajs:Ajs_0726 hypothetical protein; hypothetical protein 2307998 5747665 Daci_2104 Delftia acidovorans SPH-1 hypothetical protein YP_001563129.1 2307642 R 398578 CDS YP_001563130.1 160897548 5747666 2308127..2308426 1 NC_010002.1 KEGG: aav:Aave_2410 hypothetical protein; hypothetical protein 2308426 5747666 Daci_2105 Delftia acidovorans SPH-1 hypothetical protein YP_001563130.1 2308127 D 398578 CDS YP_001563131.1 160897549 5747668 complement(2308601..2310898) 1 NC_010002.1 NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme 2310898 5747668 Daci_2106 Delftia acidovorans SPH-1 malic enzyme YP_001563131.1 2308601 R 398578 CDS YP_001563132.1 160897550 5747669 complement(2311084..2312571) 1 NC_010002.1 TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: ajs:Ajs_1113 uracil-xanthine permease; xanthine permease 2312571 5747669 Daci_2107 Delftia acidovorans SPH-1 xanthine permease YP_001563132.1 2311084 R 398578 CDS YP_001563133.1 160897551 5747670 complement(2312976..2314268) 1 NC_010002.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: ajs:Ajs_1114 peptidase dimerisation domain protein; peptidase dimerisation domain-containing protein 2314268 5747670 Daci_2108 Delftia acidovorans SPH-1 peptidase dimerisation domain-containing protein YP_001563133.1 2312976 R 398578 CDS YP_001563134.1 160897552 5747671 complement(2314265..2316040) 1 NC_010002.1 KEGG: ajs:Ajs_1115 amidase, hydantoinase/carbamoylase family; TIGRFAM: amidase, hydantoinase/carbamoylase family; OHCU decarboxylase; PFAM: peptidase M20; peptidase dimerisation domain protein; unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein 2316040 5747671 Daci_2109 Delftia acidovorans SPH-1 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein YP_001563134.1 2314265 R 398578 CDS YP_001563135.1 160897553 5747672 complement(2316047..2317003) 1 NC_010002.1 KEGG: ajs:Ajs_1117 polysaccharide deacetylase; TIGRFAM: urate catabolism protein; PFAM: polysaccharide deacetylase; urate catabolism protein 2317003 5747672 Daci_2110 Delftia acidovorans SPH-1 urate catabolism protein YP_001563135.1 2316047 R 398578 CDS YP_001563136.1 160897554 5747673 complement(2317000..2317677) 1 NC_010002.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: ajs:Ajs_1118 transcriptional regulator, GntR family; GntR family transcriptional regulator 2317677 5747673 Daci_2111 Delftia acidovorans SPH-1 GntR family transcriptional regulator YP_001563136.1 2317000 R 398578 CDS YP_001563137.1 160897555 5747674 complement(2317764..2318687) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_1119 transcriptional regulator, LysR family; LysR family transcriptional regulator 2318687 5747674 Daci_2112 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001563137.1 2317764 R 398578 CDS YP_001563138.1 160897556 5747675 2318812..2319918 1 NC_010002.1 KEGG: ajs:Ajs_1120 tartrate dehydrogenase; TIGRFAM: tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; tartrate dehydrogenase 2319918 5747675 Daci_2113 Delftia acidovorans SPH-1 tartrate dehydrogenase YP_001563138.1 2318812 D 398578 CDS YP_001563139.1 160897557 5747676 2319971..2320948 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_1121 uncharacterized protein UPF0065; hypothetical protein 2320948 5747676 Daci_2114 Delftia acidovorans SPH-1 hypothetical protein YP_001563139.1 2319971 D 398578 CDS YP_001563140.1 160897558 5747677 2321053..2322375 1 NC_010002.1 PFAM: MOFRL domain protein; KEGG: ajs:Ajs_1122 hydroxypyruvate reductase; hydroxypyruvate reductase 2322375 5747677 Daci_2115 Delftia acidovorans SPH-1 hydroxypyruvate reductase YP_001563140.1 2321053 D 398578 CDS YP_001563141.1 160897559 5747678 complement(2322459..2323376) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pol:Bpro_4560 transcriptional regulator, LysR family; LysR family transcriptional regulator 2323376 5747678 Daci_2116 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001563141.1 2322459 R 398578 CDS YP_001563142.1 160897560 5747679 2323498..2325288 1 NC_010002.1 catalyzes the formation of 2-hydroxy-3-oxopropanoate (tartronate semialdehyde) from two molecules of glyoxylate; glyoxylate carboligase 2325288 5747679 Daci_2117 Delftia acidovorans SPH-1 glyoxylate carboligase YP_001563142.1 2323498 D 398578 CDS YP_001563143.1 160897561 5747680 2325404..2326204 1 NC_010002.1 KEGG: pol:Bpro_4562 hydroxypyruvate isomerase; TIGRFAM: hydroxypyruvate isomerase; PFAM: Xylose isomerase domain protein TIM barrel; hydroxypyruvate isomerase 2326204 5747680 Daci_2118 Delftia acidovorans SPH-1 hydroxypyruvate isomerase YP_001563143.1 2325404 D 398578 CDS YP_001563144.1 160897562 5747681 2326255..2327169 1 NC_010002.1 KEGG: pol:Bpro_4563 2-hydroxy-3-oxopropionate reductase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; 2-hydroxy-3-oxopropionate reductase 2327169 5747681 Daci_2119 Delftia acidovorans SPH-1 2-hydroxy-3-oxopropionate reductase YP_001563144.1 2326255 D 398578 CDS YP_001563145.1 160897563 5747682 complement(2327266..2329086) 1 NC_010002.1 KEGG: aav:Aave_1114 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 2329086 5747682 Daci_2120 Delftia acidovorans SPH-1 gamma-glutamyltransferase YP_001563145.1 2327266 R 398578 CDS YP_001563146.1 160897564 5747683 2329426..2329776 1 NC_010002.1 TIGRFAM: hydroxyisourate hydrolase; PFAM: Transthyretin; KEGG: ajs:Ajs_1123 transthyretin; hydroxyisourate hydrolase 2329776 5747683 Daci_2121 Delftia acidovorans SPH-1 hydroxyisourate hydrolase YP_001563146.1 2329426 D 398578 CDS YP_001563147.1 160897565 5747684 complement(2329887..2330276) 1 NC_010002.1 PFAM: DoxX family protein; KEGG: rfr:Rfer_0915 DoxX; DoxX family protein 2330276 5747684 Daci_2122 Delftia acidovorans SPH-1 DoxX family protein YP_001563147.1 2329887 R 398578 CDS YP_001563148.1 160897566 5747685 2330593..2331177 1 NC_010002.1 KEGG: bbr:BB2045 putative lipoprotein; putative lipoprotein 2331177 5747685 Daci_2123 Delftia acidovorans SPH-1 putative lipoprotein YP_001563148.1 2330593 D 398578 CDS YP_001563149.1 160897567 5747686 complement(2331243..2331572) 1 NC_010002.1 PFAM: Arc domain protein DNA binding domain protein; KEGG: aav:Aave_1717 Arc domain protein DNA binding domain protein; Arc domain-containing protein 2331572 5747686 Daci_2124 Delftia acidovorans SPH-1 Arc domain-containing protein YP_001563149.1 2331243 R 398578 CDS YP_001563150.1 160897568 5747687 2331666..2332055 1 NC_010002.1 hypothetical protein 2332055 5747687 Daci_2125 Delftia acidovorans SPH-1 hypothetical protein YP_001563150.1 2331666 D 398578 CDS YP_001563151.1 160897569 5747688 complement(2332099..2332506) 1 NC_010002.1 KEGG: ajs:Ajs_1124 hypothetical protein; hypothetical protein 2332506 5747688 Daci_2126 Delftia acidovorans SPH-1 hypothetical protein YP_001563151.1 2332099 R 398578 CDS YP_001563152.1 160897570 5747689 2332718..2333602 1 NC_010002.1 TIGRFAM: xanthine dehydrogenase accessory protein XdhC; PFAM: protein of unknown function DUF182; KEGG: pna:Pnap_1013 protein of unknown function DUF182; xanthine dehydrogenase accessory protein XdhC 2333602 5747689 Daci_2127 Delftia acidovorans SPH-1 xanthine dehydrogenase accessory protein XdhC YP_001563152.1 2332718 D 398578 CDS YP_001563153.1 160897571 5747690 2333789..2335120 1 NC_010002.1 PFAM: protein of unknown function DUF989; KEGG: ajs:Ajs_1128 protein of unknown function DUF989; hypothetical protein 2335120 5747690 Daci_2128 Delftia acidovorans SPH-1 hypothetical protein YP_001563153.1 2333789 D 398578 CDS YP_001563154.1 160897572 5747691 complement(2335218..2337101) 1 NC_010002.1 PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: aav:Aave_1120 diguanylate cyclase/phosphodiesterase; diguanylate cyclase/phosphodiesterase 2337101 5747691 Daci_2129 Delftia acidovorans SPH-1 diguanylate cyclase/phosphodiesterase YP_001563154.1 2335218 R 398578 CDS YP_001563155.1 160897573 5747692 2337299..2337877 1 NC_010002.1 PFAM: regulatory protein Crp; KEGG: ajs:Ajs_3105 putative transcriptional regulator, Crp/Fnr family; CRP/FNR family transcriptional regulator 2337877 5747692 Daci_2130 Delftia acidovorans SPH-1 CRP/FNR family transcriptional regulator YP_001563155.1 2337299 D 398578 CDS YP_001563156.1 160897574 5747693 2337998..2340280 1 NC_010002.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: aav:Aave_1127 diguanylate cyclase with PAS/PAC sensor; diguanylate cyclase 2340280 5747693 Daci_2131 Delftia acidovorans SPH-1 diguanylate cyclase YP_001563156.1 2337998 D 398578 CDS YP_001563157.1 160897575 5747694 complement(2340297..2340992) 1 NC_010002.1 PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: reh:H16_B1187 transcriptional regulator, CRP-family; Crp/FNR family transcriptional regulator 2340992 5747694 Daci_2132 Delftia acidovorans SPH-1 Crp/FNR family transcriptional regulator YP_001563157.1 2340297 R 398578 CDS YP_001563158.1 160897576 5747695 complement(2341094..2343385) 1 NC_010002.1 KEGG: nca:Noca_4310 hypothetical protein; hypothetical protein 2343385 5747695 Daci_2133 Delftia acidovorans SPH-1 hypothetical protein YP_001563158.1 2341094 R 398578 CDS YP_001563159.1 160897577 5747696 2343668..2344600 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pol:Bpro_1482 transcriptional regulator, LysR family; LysR family transcriptional regulator 2344600 5747696 Daci_2134 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001563159.1 2343668 D 398578 CDS YP_001563160.1 160897578 5747697 2344721..2346322 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_3101 ABC transporter related; ABC transporter-like protein 2346322 5747697 Daci_2135 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001563160.1 2344721 D 398578 CDS YP_001563161.1 160897579 5747698 2346309..2347415 1 NC_010002.1 PFAM: inner-membrane translocator; KEGG: aav:Aave_1133 inner-membrane translocator; inner-membrane translocator 2347415 5747698 Daci_2136 Delftia acidovorans SPH-1 inner-membrane translocator YP_001563161.1 2346309 D 398578 CDS YP_001563162.1 160897580 5747699 2347415..2348335 1 NC_010002.1 PFAM: inner-membrane translocator; KEGG: aav:Aave_1134 inner-membrane translocator; inner-membrane translocator 2348335 5747699 Daci_2137 Delftia acidovorans SPH-1 inner-membrane translocator YP_001563162.1 2347415 D 398578 CDS YP_001563163.1 160897581 5747700 2348384..2349556 1 NC_010002.1 PFAM: basic membrane lipoprotein; KEGG: aav:Aave_1135 basic membrane lipoprotein; basic membrane lipoprotein 2349556 5747700 Daci_2138 Delftia acidovorans SPH-1 basic membrane lipoprotein YP_001563163.1 2348384 D 398578 CDS YP_001563164.1 160897582 5747701 complement(2349586..2351016) 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ent:Ent638_1862 integral membrane sensor signal transduction histidine kinase; histidine kinase 2351016 5747701 Daci_2139 Delftia acidovorans SPH-1 histidine kinase YP_001563164.1 2349586 R 398578 CDS YP_001563165.1 160897583 5747702 complement(2351013..2351693) 1 NC_010002.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ent:Ent638_1861 two component transcriptional regulator, winged helix family; two component transcriptional regulator 2351693 5747702 Daci_2140 Delftia acidovorans SPH-1 two component transcriptional regulator YP_001563165.1 2351013 R 398578 CDS YP_001563166.1 160897584 5747703 2351835..2353304 1 NC_010002.1 PFAM: peptidase S41; KEGG: hch:HCH_04120 periplasmic protease; peptidase S41 2353304 5747703 Daci_2141 Delftia acidovorans SPH-1 peptidase S41 YP_001563166.1 2351835 D 398578 CDS YP_001563167.1 160897585 5747704 2353497..2354654 1 NC_010002.1 PFAM: basic membrane lipoprotein; KEGG: aav:Aave_1135 basic membrane lipoprotein; basic membrane lipoprotein 2354654 5747704 Daci_2142 Delftia acidovorans SPH-1 basic membrane lipoprotein YP_001563167.1 2353497 D 398578 CDS YP_001563168.1 160897586 5747705 2354731..2355849 1 NC_010002.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: aav:Aave_1136 Rieske (2Fe-2S) domain protein; Rieske (2Fe-2S) domain-containing protein 2355849 5747705 Daci_2143 Delftia acidovorans SPH-1 Rieske (2Fe-2S) domain-containing protein YP_001563168.1 2354731 D 398578 CDS YP_001563169.1 160897587 5747706 2355849..2356898 1 NC_010002.1 KEGG: pna:Pnap_1040 adenosine deaminase; TIGRFAM: adenosine deaminase; PFAM: adenosine/AMP deaminase; adenosine deaminase 2356898 5747706 Daci_2144 Delftia acidovorans SPH-1 adenosine deaminase YP_001563169.1 2355849 D 398578 CDS YP_001563170.1 160897588 5747707 complement(2356905..2357345) 1 NC_010002.1 PFAM: histidine triad (HIT) protein; KEGG: dar:Daro_0004 histidine triad (HIT) protein; histidine triad (HIT) protein 2357345 5747707 Daci_2145 Delftia acidovorans SPH-1 histidine triad (HIT) protein YP_001563170.1 2356905 R 398578 CDS YP_001563171.1 160897589 5747708 2357807..2358913 1 NC_010002.1 PFAM: basic membrane lipoprotein; KEGG: aav:Aave_1142 basic membrane lipoprotein; basic membrane lipoprotein 2358913 5747708 Daci_2146 Delftia acidovorans SPH-1 basic membrane lipoprotein YP_001563171.1 2357807 D 398578 CDS YP_001563172.1 160897590 5747709 2358954..2360318 1 NC_010002.1 Catalyzes the deamination of guanine; guanine deaminase 2360318 5747709 Daci_2147 Delftia acidovorans SPH-1 guanine deaminase YP_001563172.1 2358954 D 398578 CDS YP_001563173.1 160897591 5747710 2360354..2360959 1 NC_010002.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 2360959 dcd 5747710 dcd Delftia acidovorans SPH-1 deoxycytidine triphosphate deaminase YP_001563173.1 2360354 D 398578 CDS YP_001563174.1 160897592 5747711 complement(2361009..2362508) 1 NC_010002.1 KEGG: bxe:Bxe_A0815 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; L-aspartate oxidase 2362508 5747711 Daci_2149 Delftia acidovorans SPH-1 L-aspartate oxidase YP_001563174.1 2361009 R 398578 CDS YP_001563175.1 160897593 5747712 complement(2362519..2363652) 1 NC_010002.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 2363652 5747712 Daci_2150 Delftia acidovorans SPH-1 quinolinate synthetase YP_001563175.1 2362519 R 398578 CDS YP_001563176.1 160897594 5747713 complement(2363796..2365547) 1 NC_010002.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: aav:Aave_3998 diguanylate cyclase; diguanylate cyclase 2365547 5747713 Daci_2151 Delftia acidovorans SPH-1 diguanylate cyclase YP_001563176.1 2363796 R 398578 CDS YP_001563177.1 160897595 5747714 complement(2365563..2366510) 1 NC_010002.1 catalyzes the formation of L-proline from L-ornithine; ornithine cyclodeaminase 2366510 5747714 Daci_2152 Delftia acidovorans SPH-1 ornithine cyclodeaminase YP_001563177.1 2365563 R 398578 CDS YP_001563178.1 160897596 5747715 2366603..2366968 1 NC_010002.1 hypothetical protein 2366968 5747715 Daci_2153 Delftia acidovorans SPH-1 hypothetical protein YP_001563178.1 2366603 D 398578 CDS YP_001563179.1 160897597 5747716 2367077..2367955 1 NC_010002.1 PFAM: protein of unknown function zinc metallopeptidase putative; KEGG: aav:Aave_1147 protein of unknown function, zinc metallopeptidase putative; hypothetical protein 2367955 5747716 Daci_2154 Delftia acidovorans SPH-1 hypothetical protein YP_001563179.1 2367077 D 398578 CDS YP_001563180.1 160897598 5747717 2368175..2369689 1 NC_010002.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: ajs:Ajs_1132 DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase 2369689 5747717 Daci_2155 Delftia acidovorans SPH-1 DEAD/DEAH box helicase YP_001563180.1 2368175 D 398578 CDS YP_001563181.1 160897599 5747718 complement(2369775..2370620) 1 NC_010002.1 hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; diadenosine tetraphosphatase 2370620 apaH 5747718 apaH Delftia acidovorans SPH-1 diadenosine tetraphosphatase YP_001563181.1 2369775 R 398578 CDS YP_001563182.1 160897600 5747719 2370645..2371958 1 NC_010002.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: rfr:Rfer_3026 protein of unknown function DUF21; hypothetical protein 2371958 5747719 Daci_2157 Delftia acidovorans SPH-1 hypothetical protein YP_001563182.1 2370645 D 398578 CDS YP_001563183.1 160897601 5747720 2372059..2372349 1 NC_010002.1 PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: ajs:Ajs_1144 histone family protein nucleoid-structuring protein H-NS; histone family protein nucleoid-structuring protein H-NS 2372349 5747720 Daci_2158 Delftia acidovorans SPH-1 histone family protein nucleoid-structuring protein H-NS YP_001563183.1 2372059 D 398578 CDS YP_001563184.1 160897602 5747721 2372727..2373935 1 NC_010002.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: ajs:Ajs_1146 monooxygenase, FAD-binding; monooxygenase FAD-binding 2373935 5747721 Daci_2159 Delftia acidovorans SPH-1 monooxygenase FAD-binding YP_001563184.1 2372727 D 398578 CDS YP_001563185.1 160897603 5747722 complement(2373948..2375249) 1 NC_010002.1 PFAM: major facilitator superfamily MFS_1; KEGG: aav:Aave_4524 major facilitator superfamily MFS_1; major facilitator transporter 2375249 5747722 Daci_2160 Delftia acidovorans SPH-1 major facilitator transporter YP_001563185.1 2373948 R 398578 CDS YP_001563186.1 160897604 5747723 complement(2375341..2376216) 1 NC_010002.1 TIGRFAM: tryptophan 2,3-dioxygenase; PFAM: tryptophan 23-dioxygenase; KEGG: pol:Bpro_3590 tryptophan 2,3-dioxygenase; tryptophan 2,3-dioxygenase 2376216 5747723 Daci_2161 Delftia acidovorans SPH-1 tryptophan 2,3-dioxygenase YP_001563186.1 2375341 R 398578 CDS YP_001563187.1 160897605 5747724 2376380..2377300 1 NC_010002.1 TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: helix-turn-helix- domain containing protein AraC type; methylguanine DNA methyltransferase ribonuclease domain protein; Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: rso:RSc2570 probable ADA regulatory of adaptative response contains: methylated-DNA--protein-cysteine methyltransferaseO-6-methylguanine-DNA transcription regulator; AraC family transcriptional regulator 2377300 5747724 Daci_2162 Delftia acidovorans SPH-1 AraC family transcriptional regulator YP_001563187.1 2376380 D 398578 CDS YP_001563188.1 160897606 5747725 2377297..2378283 1 NC_010002.1 PFAM: HhH-GPD family protein; KEGG: cvi:CV_3195 DNA-3-methyladenine glycosidase II; HhH-GPD family protein 2378283 5747725 Daci_2163 Delftia acidovorans SPH-1 HhH-GPD family protein YP_001563188.1 2377297 D 398578 CDS YP_001563189.1 160897607 5747726 complement(2378301..2379605) 1 NC_010002.1 TIGRFAM: kynureninase; PFAM: aminotransferase class V; KEGG: aav:Aave_1156 kynureninase; kynureninase 2379605 5747726 Daci_2164 Delftia acidovorans SPH-1 kynureninase YP_001563189.1 2378301 R 398578 CDS YP_001563190.1 160897608 5747727 complement(2379680..2380309) 1 NC_010002.1 TIGRFAM: arylformamidase; PFAM: cyclase family protein; KEGG: pol:Bpro_3588 putative cyclase; arylformamidase 2380309 5747727 Daci_2165 Delftia acidovorans SPH-1 arylformamidase YP_001563190.1 2379680 R 398578 CDS YP_001563191.1 160897609 5747728 complement(2380314..2381702) 1 NC_010002.1 PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_C7638 amino acid transporter; amino acid permease-associated protein 2381702 5747728 Daci_2166 Delftia acidovorans SPH-1 amino acid permease-associated protein YP_001563191.1 2380314 R 398578 CDS YP_001563192.1 160897610 5747729 complement(2381844..2382629) 1 NC_010002.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: ppu:PP_3022 transcriptional regulator, AraC family; AraC family transcriptional regulator 2382629 5747729 Daci_2167 Delftia acidovorans SPH-1 AraC family transcriptional regulator YP_001563192.1 2381844 R 398578 CDS YP_001563193.1 160897611 5747730 complement(2382642..2383262) 1 NC_010002.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pen:PSEEN2303 transporter, LysE family; lysine exporter protein LysE/YggA 2383262 5747730 Daci_2168 Delftia acidovorans SPH-1 lysine exporter protein LysE/YggA YP_001563193.1 2382642 R 398578 CDS YP_001563194.1 160897612 5747731 complement(2383368..2383814) 1 NC_010002.1 PFAM: Endoribonuclease L-PSP; KEGG: bur:Bcep18194_B3155 endoribonuclease L-PSP; endoribonuclease L-PSP 2383814 5747731 Daci_2169 Delftia acidovorans SPH-1 endoribonuclease L-PSP YP_001563194.1 2383368 R 398578 CDS YP_001563195.1 160897613 5747732 complement(2383907..2384767) 1 NC_010002.1 TIGRFAM: tryptophan 2,3-dioxygenase; PFAM: tryptophan 23-dioxygenase; KEGG: pol:Bpro_3590 tryptophan 2,3-dioxygenase; tryptophan 2,3-dioxygenase 2384767 5747732 Daci_2170 Delftia acidovorans SPH-1 tryptophan 2,3-dioxygenase YP_001563195.1 2383907 R 398578 CDS YP_001563196.1 160897614 5747733 complement(2384764..2385969) 1 NC_010002.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 2385969 5747733 Daci_2171 Delftia acidovorans SPH-1 aromatic amino acid aminotransferase YP_001563196.1 2384764 R 398578 CDS YP_001563197.1 160897615 5747734 complement(2386045..2387478) 1 NC_010002.1 PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_C7638 amino acid transporter; amino acid permease-associated protein 2387478 5747734 Daci_2172 Delftia acidovorans SPH-1 amino acid permease-associated protein YP_001563197.1 2386045 R 398578 CDS YP_001563198.1 160897616 5747735 2387617..2388087 1 NC_010002.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: aav:Aave_1158 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 2388087 5747735 Daci_2173 Delftia acidovorans SPH-1 AsnC family transcriptional regulator YP_001563198.1 2387617 D 398578 CDS YP_001563199.1 160897617 5747736 complement(2388135..2388560) 1 NC_010002.1 PFAM: protein of unknown function UPF0153; KEGG: aav:Aave_1159 protein of unknown function UPF0153; hypothetical protein 2388560 5747736 Daci_2174 Delftia acidovorans SPH-1 hypothetical protein YP_001563199.1 2388135 R 398578 CDS YP_001563200.1 160897618 5747737 2388655..2388996 1 NC_010002.1 PFAM: FeoA family protein; KEGG: aav:Aave_1160 FeoA family protein; FeoA family protein 2388996 5747737 Daci_2175 Delftia acidovorans SPH-1 FeoA family protein YP_001563200.1 2388655 D 398578 CDS YP_001563201.1 160897619 5747738 2388993..2390936 1 NC_010002.1 TIGRFAM: ferrous iron transport protein B; PFAM: GTP-binding protein HSR1-related; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; KEGG: aav:Aave_1161 ferrous iron transport protein B; ferrous iron transport protein B 2390936 5747738 Daci_2176 Delftia acidovorans SPH-1 ferrous iron transport protein B YP_001563201.1 2388993 D 398578 CDS YP_001563202.1 160897620 5747739 2390951..2391145 1 NC_010002.1 KEGG: ajs:Ajs_3005 hypothetical protein; hypothetical protein 2391145 5747739 Daci_2177 Delftia acidovorans SPH-1 hypothetical protein YP_001563202.1 2390951 D 398578 CDS YP_001563203.1 160897621 5747740 complement(2391232..2392164) 1 NC_010002.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 2392164 5747740 Daci_2178 Delftia acidovorans SPH-1 ornithine carbamoyltransferase YP_001563203.1 2391232 R 398578 CDS YP_001563204.1 160897622 5747741 complement(2392175..2393371) 1 NC_010002.1 catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine aminotransferase 2393371 5747741 Daci_2179 Delftia acidovorans SPH-1 acetylornithine aminotransferase YP_001563204.1 2392175 R 398578 CDS YP_001563205.1 160897623 5747742 2393722..2394039 1 NC_010002.1 KEGG: aav:Aave_1165 hypothetical protein; hypothetical protein 2394039 5747742 Daci_2180 Delftia acidovorans SPH-1 hypothetical protein YP_001563205.1 2393722 D 398578 CDS YP_001563206.1 160897624 5747743 complement(2394269..2394562) 1 NC_010002.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 2394562 rpsT 5747743 rpsT Delftia acidovorans SPH-1 30S ribosomal protein S20 YP_001563206.1 2394269 R 398578 CDS YP_001563207.1 160897625 5747744 2394587..2396308 1 NC_010002.1 TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; KEGG: ajs:Ajs_2999 integral membrane protein MviN; integral membrane protein MviN 2396308 5747744 Daci_2182 Delftia acidovorans SPH-1 integral membrane protein MviN YP_001563207.1 2394587 D 398578 CDS YP_001563208.1 160897626 5747745 2396367..2397212 1 NC_010002.1 KEGG: vei:Veis_1775 hypothetical protein; hypothetical protein 2397212 5747745 Daci_2183 Delftia acidovorans SPH-1 hypothetical protein YP_001563208.1 2396367 D 398578 CDS YP_001563209.1 160897627 5747746 complement(2397243..2398301) 1 NC_010002.1 KEGG: aav:Aave_1969 hypothetical protein; hypothetical protein 2398301 5747746 Daci_2184 Delftia acidovorans SPH-1 hypothetical protein YP_001563209.1 2397243 R 398578 CDS YP_001563210.1 160897628 5747747 complement(2398319..2399371) 1 NC_010002.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 2399371 5747747 Daci_2185 Delftia acidovorans SPH-1 phosphoribosylaminoimidazole synthetase YP_001563210.1 2398319 R 398578 CDS YP_001563211.1 160897629 5747748 2399686..2400393 1 NC_010002.1 TIGRFAM: DnaA regulatory inactivator Hda; PFAM: Chromosomal replication initiator DnaA; KEGG: aav:Aave_1971 chromosomal replication initiator, DnaA; DnaA regulatory inactivator Hda 2400393 5747748 Daci_2186 Delftia acidovorans SPH-1 DnaA regulatory inactivator Hda YP_001563211.1 2399686 D 398578 CDS YP_001563212.1 160897630 5747749 2400482..2401183 1 NC_010002.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; KEGG: aav:Aave_1972 HAD-superfamily subfamily IB hydrolase, TIGR01490; HAD family hydrolase 2401183 5747749 Daci_2187 Delftia acidovorans SPH-1 HAD family hydrolase YP_001563212.1 2400482 D 398578 CDS YP_001563213.1 160897631 5747750 2401180..2402769 1 NC_010002.1 KEGG: ajs:Ajs_2991 poly(A) polymerase; TIGRFAM: poly(A) polymerase; PFAM: Polynucleotide adenylyltransferase region; poly(A) polymerase 2402769 5747750 Daci_2188 Delftia acidovorans SPH-1 poly(A) polymerase YP_001563213.1 2401180 D 398578 CDS YP_001563214.1 160897632 5747751 2402744..2403283 1 NC_010002.1 KEGG: aav:Aave_1974 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 2403283 5747751 Daci_2189 Delftia acidovorans SPH-1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_001563214.1 2402744 D 398578 CDS YP_001563215.1 160897633 5747752 2403465..2405090 1 NC_010002.1 PFAM: glycosyl transferase family 39; KEGG: bbr:BB4268 hypothetical protein; glycosyl transferase family protein 2405090 5747752 Daci_2190 Delftia acidovorans SPH-1 glycosyl transferase family protein YP_001563215.1 2403465 D 398578 CDS YP_001563216.1 160897634 5747753 complement(2405100..2406038) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_2989 uncharacterized protein UPF0065; hypothetical protein 2406038 5747753 Daci_2191 Delftia acidovorans SPH-1 hypothetical protein YP_001563216.1 2405100 R 398578 CDS YP_001563217.1 160897635 5747754 complement(2406160..2407212) 1 NC_010002.1 catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose; CDP-6-deoxy-delta-3,4-glucoseen reductase 2407212 5747754 Daci_2192 Delftia acidovorans SPH-1 CDP-6-deoxy-delta-3,4-glucoseen reductase YP_001563217.1 2406160 R 398578 CDS YP_001563218.1 160897636 5747755 2407360..2408301 1 NC_010002.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: ajs:Ajs_2986 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 2408301 5747755 Daci_2193 Delftia acidovorans SPH-1 NAD-dependent epimerase/dehydratase YP_001563218.1 2407360 D 398578 CDS YP_001563219.1 160897637 5747756 complement(2408303..2408977) 1 NC_010002.1 KEGG: aav:Aave_1979 hypothetical protein; hypothetical protein 2408977 5747756 Daci_2194 Delftia acidovorans SPH-1 hypothetical protein YP_001563219.1 2408303 R 398578 CDS YP_001563220.1 160897638 5747757 complement(2409075..2409737) 1 NC_010002.1 KEGG: ptr:750122 hypothetical protein LOC750122; hypothetical protein 2409737 5747757 Daci_2195 Delftia acidovorans SPH-1 hypothetical protein YP_001563220.1 2409075 R 398578 CDS YP_001563221.1 160897639 5747758 2410294..2410836 1 NC_010002.1 PFAM: 67-dimethyl-8-ribityllumazine synthase; KEGG: rha:RHA1_ro01631 riboflavin synthase beta subunit; 67-dimethyl-8-ribityllumazine synthase 2410836 5747758 Daci_2196 Delftia acidovorans SPH-1 67-dimethyl-8-ribityllumazine synthase YP_001563221.1 2410294 D 398578 CDS YP_001563222.1 160897640 5747759 2411012..2412142 1 NC_010002.1 PFAM: Extracellular ligand-binding receptor; KEGG: aav:Aave_3159 extracellular ligand-binding receptor; extracellular ligand-binding receptor 2412142 5747759 Daci_2197 Delftia acidovorans SPH-1 extracellular ligand-binding receptor YP_001563222.1 2411012 D 398578 CDS YP_001563223.1 160897641 5747760 complement(2412211..2413146) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pol:Bpro_4580 transcriptional regulator, LysR family; LysR family transcriptional regulator 2413146 5747760 Daci_2198 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001563223.1 2412211 R 398578 CDS YP_001563224.1 160897642 5747761 2413270..2413923 1 NC_010002.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; Male sterility domain; KEGG: pol:Bpro_4581 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 2413923 5747761 Daci_2199 Delftia acidovorans SPH-1 NAD-dependent epimerase/dehydratase YP_001563224.1 2413270 D 398578 CDS YP_001563225.1 160897643 5747762 2414003..2414392 1 NC_010002.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: aav:Aave_0668 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 2414392 5747762 Daci_2200 Delftia acidovorans SPH-1 glyoxalase/bleomycin resistance protein/dioxygenase YP_001563225.1 2414003 D 398578 CDS YP_001563226.1 160897644 5747763 2414493..2415716 1 NC_010002.1 PFAM: major facilitator superfamily MFS_1; KEGG: pae:PA4113 probable MFS transporter; sugar efflux transporter 2415716 5747763 Daci_2201 Delftia acidovorans SPH-1 sugar efflux transporter YP_001563226.1 2414493 D 398578 CDS YP_001563227.1 160897645 5747764 complement(2415723..2416985) 1 NC_010002.1 PFAM: major facilitator superfamily MFS_1; KEGG: reh:H16_B0047 MFS transporter; major facilitator transporter 2416985 5747764 Daci_2202 Delftia acidovorans SPH-1 major facilitator transporter YP_001563227.1 2415723 R 398578 CDS YP_001563228.1 160897646 5747765 complement(2416963..2417424) 1 NC_010002.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: har:HEAR0883 putative guanine deaminase (guanase) (guanine aminase) (guanine aminohydrolase) (GAH) (GDEase); CMP/dCMP deaminase 2417424 5747765 Daci_2203 Delftia acidovorans SPH-1 CMP/dCMP deaminase YP_001563228.1 2416963 R 398578 CDS YP_001563229.1 160897647 5747766 2417500..2418420 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: har:HEAR0881 putative transcriptional regulator; LysR family transcriptional regulator 2418420 5747766 Daci_2204 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001563229.1 2417500 D 398578 CDS YP_001563230.1 160897648 5747767 complement(2418467..2419441) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_2981 uncharacterized protein UPF0065; hypothetical protein 2419441 5747767 Daci_2205 Delftia acidovorans SPH-1 hypothetical protein YP_001563230.1 2418467 R 398578 CDS YP_001563231.1 160897649 5747768 complement(2419579..2420826) 1 NC_010002.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: ajs:Ajs_2980 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 2420826 5747768 Daci_2206 Delftia acidovorans SPH-1 L-carnitine dehydratase/bile acid-inducible protein F YP_001563231.1 2419579 R 398578 CDS YP_001563232.1 160897650 5747769 complement(2421016..2422212) 1 NC_010002.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_2979 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 2422212 5747769 Daci_2207 Delftia acidovorans SPH-1 acyl-CoA dehydrogenase domain-containing protein YP_001563232.1 2421016 R 398578 CDS YP_001563233.1 160897651 5747770 2422442..2423389 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_2978 transcriptional regulator, LysR family; LysR family transcriptional regulator 2423389 5747770 Daci_2208 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001563233.1 2422442 D 398578 CDS YP_001563234.1 160897652 5747771 complement(2423510..2424256) 1 NC_010002.1 PFAM: LrgB family protein; KEGG: ajs:Ajs_2977 LrgB family protein; LrgB family protein 2424256 5747771 Daci_2209 Delftia acidovorans SPH-1 LrgB family protein YP_001563234.1 2423510 R 398578 CDS YP_001563235.1 160897653 5747772 complement(2424253..2424630) 1 NC_010002.1 PFAM: LrgA family protein; KEGG: ajs:Ajs_2976 LrgA family protein; LrgA family protein 2424630 5747772 Daci_2210 Delftia acidovorans SPH-1 LrgA family protein YP_001563235.1 2424253 R 398578 CDS YP_001563236.1 160897654 5747773 2424887..2425108 1 NC_010002.1 KEGG: aav:Aave_1984 hypothetical protein; hypothetical protein 2425108 5747773 Daci_2211 Delftia acidovorans SPH-1 hypothetical protein YP_001563236.1 2424887 D 398578 CDS YP_001563237.1 160897655 5747775 2425859..2426782 1 NC_010002.1 catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; cysteine synthase B 2426782 cysM 5747775 cysM Delftia acidovorans SPH-1 cysteine synthase B YP_001563237.1 2425859 D 398578 CDS YP_001563238.1 160897656 5747776 2426860..2427462 1 NC_010002.1 PFAM: NUDIX hydrolase; KEGG: ajs:Ajs_2899 NUDIX hydrolase; NUDIX hydrolase 2427462 5747776 Daci_2213 Delftia acidovorans SPH-1 NUDIX hydrolase YP_001563238.1 2426860 D 398578 CDS YP_001563239.1 160897657 5747777 2427489..2427716 1 NC_010002.1 PFAM: SirA family protein; KEGG: ajs:Ajs_2898 SirA family protein; SirA family protein 2427716 5747777 Daci_2214 Delftia acidovorans SPH-1 SirA family protein YP_001563239.1 2427489 D 398578 CDS YP_001563240.1 160897658 5747778 complement(2427802..2428689) 1 NC_010002.1 TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: ajs:Ajs_2897 UTP-glucose-1-phosphate uridylyltransferase GalU; UTP-glucose-1-phosphate uridylyltransferase 2428689 5747778 Daci_2215 Delftia acidovorans SPH-1 UTP-glucose-1-phosphate uridylyltransferase YP_001563240.1 2427802 R 398578 CDS YP_001563241.1 160897659 5747779 complement(2428928..2431840) 1 NC_010002.1 TIGRFAM: valyl-tRNA synthetase; KEGG: ajs:Ajs_2896 valyl-tRNA synthetase; valyl-tRNA synthetase 2431840 5747779 Daci_2216 Delftia acidovorans SPH-1 valyl-tRNA synthetase YP_001563241.1 2428928 R 398578 CDS YP_001563242.1 160897660 5747780 complement(2431987..2432616) 1 NC_010002.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: aav:Aave_1994 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 2432616 5747780 Daci_2217 Delftia acidovorans SPH-1 glyoxalase/bleomycin resistance protein/dioxygenase YP_001563242.1 2431987 R 398578 CDS YP_001563243.1 160897661 5747781 2432863..2433756 1 NC_010002.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: bov:BOV_0501 cobalt-zinc-cadmium resistance protein; cation diffusion facilitator family transporter 2433756 5747781 Daci_2218 Delftia acidovorans SPH-1 cation diffusion facilitator family transporter YP_001563243.1 2432863 D 398578 CDS YP_001563244.1 160897662 5747782 2433795..2434043 1 NC_010002.1 PFAM: protein of unknown function DUF1272; KEGG: ret:RHE_CH03309 probable urease-associated protein; hypothetical protein 2434043 5747782 Daci_2219 Delftia acidovorans SPH-1 hypothetical protein YP_001563244.1 2433795 D 398578 CDS YP_001563245.1 160897663 5747783 2434063..2434416 1 NC_010002.1 hypothetical protein 2434416 5747783 Daci_2220 Delftia acidovorans SPH-1 hypothetical protein YP_001563245.1 2434063 D 398578 CDS YP_001563246.1 160897664 5747784 complement(2434432..2434839) 1 NC_010002.1 KEGG: pap:PSPA7_1712 hypothetical protein; hypothetical protein 2434839 5747784 Daci_2221 Delftia acidovorans SPH-1 hypothetical protein YP_001563246.1 2434432 R 398578 CDS YP_001563247.1 160897665 5747785 complement(2434860..2435207) 1 NC_010002.1 KEGG: bur:Bcep18194_B2580 hypothetical protein; hypothetical protein 2435207 5747785 Daci_2222 Delftia acidovorans SPH-1 hypothetical protein YP_001563247.1 2434860 R 398578 CDS YP_001563248.1 160897666 5747786 complement(2435242..2435925) 1 NC_010002.1 PFAM: Negative transcriptional regulator; KEGG: aav:Aave_4171 FMN-binding negative transcriptional regulator; FMN-binding negative transcriptional regulator 2435925 5747786 Daci_2223 Delftia acidovorans SPH-1 FMN-binding negative transcriptional regulator YP_001563248.1 2435242 R 398578 CDS YP_001563249.1 160897667 5747787 2435961..2437493 1 NC_010002.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: reh:H16_B1977 transcriptional regulator, MocR family; transcriptional regulator 2437493 5747787 Daci_2224 Delftia acidovorans SPH-1 transcriptional regulator YP_001563249.1 2435961 D 398578 CDS YP_001563250.1 160897668 5747788 complement(2437524..2441714) 1 NC_010002.1 TIGRFAM: conserved repeat domain protein; KEGG: mpt:Mpe_B0343 hypothetical protein; hypothetical protein 2441714 5747788 Daci_2225 Delftia acidovorans SPH-1 hypothetical protein YP_001563250.1 2437524 R 398578 CDS YP_001563251.1 160897669 5747789 complement(2442026..2442604) 1 NC_010002.1 PFAM: YceI family protein; KEGG: pna:Pnap_3578 YceI family protein; hypothetical protein 2442604 5747789 Daci_2226 Delftia acidovorans SPH-1 hypothetical protein YP_001563251.1 2442026 R 398578 CDS YP_001563252.1 160897670 5747790 complement(2442674..2443246) 1 NC_010002.1 PFAM: YceI family protein; KEGG: aav:Aave_3506 YceI family protein; hypothetical protein 2443246 5747790 Daci_2227 Delftia acidovorans SPH-1 hypothetical protein YP_001563252.1 2442674 R 398578 CDS YP_001563253.1 160897671 5747791 complement(2443339..2443932) 1 NC_010002.1 PFAM: cytochrome B561; KEGG: aav:Aave_3507 cytochrome b561; cytochrome B561 2443932 5747791 Daci_2228 Delftia acidovorans SPH-1 cytochrome B561 YP_001563253.1 2443339 R 398578 CDS YP_001563254.1 160897672 5747792 complement(2444143..2445450) 1 NC_010002.1 PFAM: HemY domain protein; KEGG: aav:Aave_1996 HemY domain protein; HemY domain-containing protein 2445450 5747792 Daci_2229 Delftia acidovorans SPH-1 HemY domain-containing protein YP_001563254.1 2444143 R 398578 CDS YP_001563255.1 160897673 5747793 complement(2445470..2446612) 1 NC_010002.1 PFAM: protein of unknown function DUF513 hemX; KEGG: vei:Veis_1038 protein of unknown function DUF513, HemX; hypothetical protein 2446612 5747793 Daci_2230 Delftia acidovorans SPH-1 hypothetical protein YP_001563255.1 2445470 R 398578 CDS YP_001563256.1 160897674 5747794 complement(2446609..2447418) 1 NC_010002.1 PFAM: Uroporphyrinogen III synthase HEM4; KEGG: vei:Veis_1039 uroporphyrinogen III synthase; uroporphyrinogen III synthase HEM4 2447418 5747794 Daci_2231 Delftia acidovorans SPH-1 uroporphyrinogen III synthase HEM4 YP_001563256.1 2446609 R 398578 CDS YP_001563257.1 160897675 5747795 complement(2447432..2448370) 1 NC_010002.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 2448370 hemC 5747795 hemC Delftia acidovorans SPH-1 porphobilinogen deaminase YP_001563257.1 2447432 R 398578 CDS YP_001563258.1 160897676 5747796 2448483..2451332 1 NC_010002.1 catalyzes the formation of oxaloacetate from phosphoenolpyruvate; phosphoenolpyruvate carboxylase 2451332 5747796 Daci_2233 Delftia acidovorans SPH-1 phosphoenolpyruvate carboxylase YP_001563258.1 2448483 D 398578 CDS YP_001563259.1 160897677 5747797 2451435..2453543 1 NC_010002.1 PFAM: EAL domain protein; phosphotransferase system EIIC; KEGG: pfl:PFL_3312 phosphotransferase system EIIC domain/EAL domain protein; EAL domain-containing protein 2453543 5747797 Daci_2234 Delftia acidovorans SPH-1 EAL domain-containing protein YP_001563259.1 2451435 D 398578 CDS YP_001563260.1 160897678 5747798 complement(2453595..2454137) 1 NC_010002.1 With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems; transcriptional activator FlhC 2454137 5747798 Daci_2235 Delftia acidovorans SPH-1 transcriptional activator FlhC YP_001563260.1 2453595 R 398578 CDS YP_001563261.1 160897679 5747799 complement(2454165..2454491) 1 NC_010002.1 PFAM: flagellar transcriptional activator; KEGG: aav:Aave_2006 flagellar transcriptional activator, FlhD subunit; flagellar transcriptional activator 2454491 5747799 Daci_2236 Delftia acidovorans SPH-1 flagellar transcriptional activator YP_001563261.1 2454165 R 398578 CDS YP_001563262.1 160897680 5747800 complement(2454812..2455726) 1 NC_010002.1 PFAM: Rhodanese domain protein; KEGG: ajs:Ajs_1033 3-mercaptopyruvate sulfurtransferase; rhodanese domain-containing protein 2455726 5747800 Daci_2237 Delftia acidovorans SPH-1 rhodanese domain-containing protein YP_001563262.1 2454812 R 398578 CDS YP_001563263.1 160897681 5747801 complement(2455820..2456725) 1 NC_010002.1 KEGG: aav:Aave_2011 putative transmembrane protein; putative transmembrane protein 2456725 5747801 Daci_2238 Delftia acidovorans SPH-1 putative transmembrane protein YP_001563263.1 2455820 R 398578 CDS YP_001563264.1 160897682 5747802 complement(2457049..2458188) 1 NC_010002.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: ajs:Ajs_1035 Rieske (2Fe-2S) domain protein; Rieske (2Fe-2S) domain-containing protein 2458188 5747802 Daci_2239 Delftia acidovorans SPH-1 Rieske (2Fe-2S) domain-containing protein YP_001563264.1 2457049 R 398578 CDS YP_001563265.1 160897683 5747803 2458529..2458765 1 NC_010002.1 PFAM: Exonuclease VII small subunit; KEGG: aav:Aave_2013 exodeoxyribonuclease VII, small subunit; exonuclease VII small subunit 2458765 5747803 Daci_2240 Delftia acidovorans SPH-1 exonuclease VII small subunit YP_001563265.1 2458529 D 398578 CDS YP_001563266.1 160897684 5747804 2458774..2459724 1 NC_010002.1 PFAM: Polyprenyl synthetase; KEGG: ajs:Ajs_1037 polyprenyl synthetase; polyprenyl synthetase 2459724 5747804 Daci_2241 Delftia acidovorans SPH-1 polyprenyl synthetase YP_001563266.1 2458774 D 398578 CDS YP_001563267.1 160897685 5747805 2459892..2461808 1 NC_010002.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 2461808 5747805 Daci_2242 Delftia acidovorans SPH-1 1-deoxy-D-xylulose-5-phosphate synthase YP_001563267.1 2459892 D 398578 CDS YP_001563268.1 160897686 5747806 2462057..2463139 1 NC_010002.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rfr:Rfer_2874 twin-arginine translocation pathway signal; TRAP dicarboxylate transporter subunit DctP 2463139 5747806 Daci_2243 Delftia acidovorans SPH-1 TRAP dicarboxylate transporter subunit DctP YP_001563268.1 2462057 D 398578 CDS YP_001563269.1 160897687 5747807 2463422..2464501 1 NC_010002.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rfr:Rfer_2873 twin-arginine translocation pathway signal; TRAP dicarboxylate transporter subunit DctP 2464501 5747807 Daci_2244 Delftia acidovorans SPH-1 TRAP dicarboxylate transporter subunit DctP YP_001563269.1 2463422 D 398578 CDS YP_001563270.1 160897688 5747808 complement(2464648..2466477) 1 NC_010002.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rfr:Rfer_2872 TRAP dicarboxylate transporter-DctM subunit; TRAP dicarboxylate transporter subunit DctM 2466477 5747808 Daci_2245 Delftia acidovorans SPH-1 TRAP dicarboxylate transporter subunit DctM YP_001563270.1 2464648 R 398578 CDS YP_001563271.1 160897689 5747809 complement(2466495..2467103) 1 NC_010002.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: vei:Veis_2882 tripartite ATP-independent periplasmic transporter, DctQ component; tripartite ATP-independent periplasmic transporter DctQ 2467103 5747809 Daci_2246 Delftia acidovorans SPH-1 tripartite ATP-independent periplasmic transporter DctQ YP_001563271.1 2466495 R 398578 CDS YP_001563272.1 160897690 5747810 complement(2467280..2468446) 1 NC_010002.1 PFAM: helix-turn-helix Fis-type; GAF domain protein; KEGG: pol:Bpro_1769 putative transcriptional regulator, fis family; Fis family transcriptional regulator 2468446 5747810 Daci_2247 Delftia acidovorans SPH-1 Fis family transcriptional regulator YP_001563272.1 2467280 R 398578 CDS YP_001563273.1 160897691 5747811 2468715..2469191 1 NC_010002.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: vei:Veis_4544 (2Fe-2S)-binding domain protein; 2Fe-2S iron-sulfur cluster-binding domain-containing protein 2469191 5747811 Daci_2248 Delftia acidovorans SPH-1 2Fe-2S iron-sulfur cluster-binding domain-containing protein YP_001563273.1 2468715 D 398578 CDS YP_001563274.1 160897692 5747812 2469221..2471611 1 NC_010002.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: vei:Veis_4543 carbon-monoxide dehydrogenase (acceptor); aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit 2471611 5747812 Daci_2249 Delftia acidovorans SPH-1 aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit YP_001563274.1 2469221 D 398578 CDS YP_001563275.1 160897693 5747813 2471622..2472413 1 NC_010002.1 PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: vei:Veis_4542 transcriptional regulator, fis family; carbon-monoxide dehydrogenase 2472413 5747813 Daci_2250 Delftia acidovorans SPH-1 carbon-monoxide dehydrogenase YP_001563275.1 2471622 D 398578 CDS YP_001563276.1 160897694 5747814 2472422..2473360 1 NC_010002.1 PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: vei:Veis_4537 ATPase associated with various cellular activities, AAA_5; ATPase 2473360 5747814 Daci_2251 Delftia acidovorans SPH-1 ATPase YP_001563276.1 2472422 D 398578 CDS YP_001563277.1 160897695 5747815 2473357..2474631 1 NC_010002.1 PFAM: VWA containing CoxE family protein; KEGG: vei:Veis_4536 VWA containing CoxE family protein; VWA containing CoxE family protein 2474631 5747815 Daci_2252 Delftia acidovorans SPH-1 VWA containing CoxE family protein YP_001563277.1 2473357 D 398578 CDS YP_001563278.1 160897696 5747816 2474670..2475401 1 NC_010002.1 PFAM: carbon monoxide dehydrogenase subunit G; KEGG: vei:Veis_4535 carbon monoxide dehydrogenase subunit G; carbon monoxide dehydrogenase subunit G 2475401 5747816 Daci_2253 Delftia acidovorans SPH-1 carbon monoxide dehydrogenase subunit G YP_001563278.1 2474670 D 398578 CDS YP_001563279.1 160897697 5747817 2475686..2476756 1 NC_010002.1 PFAM: protein of unknown function DUF182; KEGG: pol:Bpro_0572 protein of unknown function DUF182; hypothetical protein 2476756 5747817 Daci_2254 Delftia acidovorans SPH-1 hypothetical protein YP_001563279.1 2475686 D 398578 CDS YP_001563280.1 160897698 5747818 complement(2476753..2477139) 1 NC_010002.1 KEGG: sco:SCO7641 dehydrogenase; dehydrogenase 2477139 5747818 Daci_2255 Delftia acidovorans SPH-1 dehydrogenase YP_001563280.1 2476753 R 398578 CDS YP_001563281.1 160897699 5747819 2477561..2479177 1 NC_010002.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: reu:Reut_A0572 secretion protein HlyD; RND family efflux transporter MFP subunit 2479177 5747819 Daci_2256 Delftia acidovorans SPH-1 RND family efflux transporter MFP subunit YP_001563281.1 2477561 D 398578 CDS YP_001563282.1 160897700 5747820 2479224..2482355 1 NC_010002.1 PFAM: acriflavin resistance protein; KEGG: mms:mma_1683 cation/multidrug efflux pump; acriflavin resistance protein 2482355 5747820 Daci_2257 Delftia acidovorans SPH-1 acriflavin resistance protein YP_001563282.1 2479224 D 398578 CDS YP_001563283.1 160897701 5747821 2482704..2485865 1 NC_010002.1 PFAM: acriflavin resistance protein; KEGG: mms:mma_1682 AcrB/AcrD/AcrF family membrane protein; acriflavin resistance protein 2485865 5747821 Daci_2258 Delftia acidovorans SPH-1 acriflavin resistance protein YP_001563283.1 2482704 D 398578 CDS YP_001563284.1 160897702 5747822 2485862..2487388 1 NC_010002.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: mms:mma_1681 outer membrane protein, TolC-like; RND efflux system outer membrane lipoprotein 2487388 5747822 Daci_2259 Delftia acidovorans SPH-1 RND efflux system outer membrane lipoprotein YP_001563284.1 2485862 D 398578 CDS YP_001563285.1 160897703 5747823 complement(2487392..2487757) 1 NC_010002.1 KEGG: aav:Aave_2031 hypothetical protein; hypothetical protein 2487757 5747823 Daci_2260 Delftia acidovorans SPH-1 hypothetical protein YP_001563285.1 2487392 R 398578 CDS YP_001563286.1 160897704 5747824 2487890..2488543 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_0975 ABC-type transport system involved in cytochrome c biogenesis ATPase component-like protein; ABC transporter-like protein 2488543 5747824 Daci_2261 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001563286.1 2487890 D 398578 CDS YP_001563287.1 160897705 5747825 complement(2488581..2489390) 1 NC_010002.1 PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: aav:Aave_2035 response regulator receiver protein; LytTR family two component transcriptional regulator 2489390 5747825 Daci_2262 Delftia acidovorans SPH-1 LytTR family two component transcriptional regulator YP_001563287.1 2488581 R 398578 CDS YP_001563288.1 160897706 5747826 complement(2489550..2490659) 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase internal region; KEGG: aav:Aave_2036 integral membrane sensor signal transduction histidine kinase; signal transduction histidine kinase LytS 2490659 5747826 Daci_2263 Delftia acidovorans SPH-1 signal transduction histidine kinase LytS YP_001563288.1 2489550 R 398578 CDS YP_001563289.1 160897707 5747827 complement(2490668..2491003) 1 NC_010002.1 KEGG: ajs:Ajs_1151 hypothetical protein; hypothetical protein 2491003 5747827 Daci_2264 Delftia acidovorans SPH-1 hypothetical protein YP_001563289.1 2490668 R 398578 CDS YP_001563290.1 160897708 5747828 complement(2491038..2491598) 1 NC_010002.1 KEGG: mlo:mlr2123 hypothetical protein; membrane protein 2491598 5747828 Daci_2265 Delftia acidovorans SPH-1 membrane protein YP_001563290.1 2491038 R 398578 CDS YP_001563291.1 160897709 5747829 2491762..2493936 1 NC_010002.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mms:mma_1643 TonB-dependent ferric siderophore receptor; TonB-dependent siderophore receptor 2493936 5747829 Daci_2266 Delftia acidovorans SPH-1 TonB-dependent siderophore receptor YP_001563291.1 2491762 D 398578 CDS YP_001563292.1 160897710 5747830 2493955..2495184 1 NC_010002.1 PFAM: PepSY-associated TM helix domain protein; KEGG: mms:mma_3524 hypothetical protein; PepSY-associated TM helix domain-containing protein 2495184 5747830 Daci_2267 Delftia acidovorans SPH-1 PepSY-associated TM helix domain-containing protein YP_001563292.1 2493955 D 398578 CDS YP_001563293.1 160897711 5747831 complement(2495534..2495857) 1 NC_010002.1 PFAM: PsiF repeat protein; KEGG: ppu:PP_4851 phosphate starvation-inducible protein, PsiF precursor; PsiF repeat-containing protein 2495857 5747831 Daci_2268 Delftia acidovorans SPH-1 PsiF repeat-containing protein YP_001563293.1 2495534 R 398578 CDS YP_001563294.1 160897712 5747832 2496006..2496833 1 NC_010002.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase 2496833 5747832 Daci_2269 Delftia acidovorans SPH-1 undecaprenyl pyrophosphate phosphatase YP_001563294.1 2496006 D 398578 CDS YP_001563295.1 160897713 5747833 2497042..2499006 1 NC_010002.1 TIGRFAM: acetoacetyl-CoA synthase; PFAM: AMP-dependent synthetase and ligase; KEGG: pna:Pnap_2133 acetoacetyl-CoA synthase; acetoacetyl-CoA synthase 2499006 5747833 Daci_2270 Delftia acidovorans SPH-1 acetoacetyl-CoA synthase YP_001563295.1 2497042 D 398578 CDS YP_001563296.1 160897714 5747834 2499135..2499575 1 NC_010002.1 PFAM: regulatory protein MarR; KEGG: pol:Bpro_3119 transcriptional regulator, MarR family; MarR family transcriptional regulator 2499575 5747834 Daci_2271 Delftia acidovorans SPH-1 MarR family transcriptional regulator YP_001563296.1 2499135 D 398578 CDS YP_001563297.1 160897715 5747835 complement(2499715..2500575) 1 NC_010002.1 KEGG: aav:Aave_2045 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 2500575 5747835 Daci_2272 Delftia acidovorans SPH-1 alpha/beta hydrolase fold protein YP_001563297.1 2499715 R 398578 CDS YP_001563298.1 160897716 5747836 complement(2500572..2501630) 1 NC_010002.1 KEGG: aav:Aave_2046 20S proteasome, A and B subunits; proteasome-type protease-like protein 2501630 5747836 Daci_2273 Delftia acidovorans SPH-1 proteasome-type protease-like protein YP_001563298.1 2500572 R 398578 CDS YP_001563299.1 160897717 5747837 complement(2501686..2504421) 1 NC_010002.1 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 2504421 5747837 Daci_2274 Delftia acidovorans SPH-1 DNA mismatch repair protein MutS YP_001563299.1 2501686 R 398578 CDS YP_001563300.1 160897718 5747838 complement(2504594..2505388) 1 NC_010002.1 hypothetical protein 2505388 5747838 Daci_2275 Delftia acidovorans SPH-1 hypothetical protein YP_001563300.1 2504594 R 398578 CDS YP_001563301.1 160897719 5747839 2505611..2506255 1 NC_010002.1 PFAM: helix-turn-helix domain protein; KEGG: bch:Bcen2424_3337 transcriptional regulator, XRE family; XRE family transcriptional regulator 2506255 5747839 Daci_2276 Delftia acidovorans SPH-1 XRE family transcriptional regulator YP_001563301.1 2505611 D 398578 CDS YP_001563302.1 160897720 5747840 2506410..2507252 1 NC_010002.1 KEGG: tcx:Tcr_0665 hypothetical protein; hypothetical protein 2507252 5747840 Daci_2277 Delftia acidovorans SPH-1 hypothetical protein YP_001563302.1 2506410 D 398578 CDS YP_001563303.1 160897721 5747841 2507249..2508127 1 NC_010002.1 hypothetical protein 2508127 5747841 Daci_2278 Delftia acidovorans SPH-1 hypothetical protein YP_001563303.1 2507249 D 398578 CDS YP_001563304.1 160897722 5747843 complement(2508533..2508958) 1 NC_010002.1 KEGG: aav:Aave_3789 putative TIS1421-transposase orfA protein; putative TIS1421-transposase orfA protein 2508958 5747843 Daci_2280 Delftia acidovorans SPH-1 putative TIS1421-transposase orfA protein YP_001563304.1 2508533 R 398578 CDS YP_001563305.1 160897723 5747844 complement(2509125..2509835) 1 NC_010002.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: reh:H16_A0034 transcriptional regulator, GntR-family; GntR family transcriptional regulator 2509835 5747844 Daci_2281 Delftia acidovorans SPH-1 GntR family transcriptional regulator YP_001563305.1 2509125 R 398578 CDS YP_001563306.1 160897724 5747845 2509983..2510969 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: pna:Pnap_0869 uncharacterized protein UPF0065; hypothetical protein 2510969 5747845 Daci_2282 Delftia acidovorans SPH-1 hypothetical protein YP_001563306.1 2509983 D 398578 CDS YP_001563307.1 160897725 5747846 2510985..2511938 1 NC_010002.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: pla:Plav_2454 SMP-30/gluconolaconase/LRE domain protein; SMP-30/gluconolaconase/LRE domain-containing protein 2511938 5747846 Daci_2283 Delftia acidovorans SPH-1 SMP-30/gluconolaconase/LRE domain-containing protein YP_001563307.1 2510985 D 398578 CDS YP_001563308.1 160897726 5747847 2512029..2513756 1 NC_010002.1 catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; catalytic; acetolactate synthase catalytic subunit 2513756 5747847 Daci_2284 Delftia acidovorans SPH-1 acetolactate synthase catalytic subunit YP_001563308.1 2512029 D 398578 CDS YP_001563309.1 160897727 5747848 2513756..2514523 1 NC_010002.1 catalyzes the conversion of 3-hydroxyacyl-CoA to 3-oxyacyl-CoA; acetoacetyl-CoA reductase 2514523 5747848 Daci_2285 Delftia acidovorans SPH-1 acetoacetyl-CoA reductase YP_001563309.1 2513756 D 398578 CDS YP_001563310.1 160897728 5747849 2514723..2515715 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: bbr:BB0335 hypothetical protein; hypothetical protein 2515715 5747849 Daci_2286 Delftia acidovorans SPH-1 hypothetical protein YP_001563310.1 2514723 D 398578 CDS YP_001563311.1 160897729 5747850 complement(2515847..2516563) 1 NC_010002.1 TIGRFAM: arsenical resistance protein ArsH; PFAM: NADPH-dependent FMN reductase; KEGG: bbr:BB2781 putative NADPH-dependent FMN reductase; arsenical resistance protein ArsH 2516563 5747850 Daci_2287 Delftia acidovorans SPH-1 arsenical resistance protein ArsH YP_001563311.1 2515847 R 398578 CDS YP_001563312.1 160897730 5747851 complement(2516550..2516981) 1 NC_010002.1 TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: bbr:BB2782 arsenate reductase; arsenate reductase 2516981 5747851 Daci_2288 Delftia acidovorans SPH-1 arsenate reductase YP_001563312.1 2516550 R 398578 CDS YP_001563313.1 160897731 5747852 complement(2517007..2517336) 1 NC_010002.1 SMART: regulatory protein ArsR; KEGG: ajs:Ajs_2514 regulatory protein, ArsR; ArsR family transcriptional regulator 2517336 5747852 Daci_2289 Delftia acidovorans SPH-1 ArsR family transcriptional regulator YP_001563313.1 2517007 R 398578 CDS YP_001563314.1 160897732 5747853 complement(2517422..2518519) 1 NC_010002.1 KEGG: rfr:Rfer_4021 hypothetical protein; hypothetical protein 2518519 5747853 Daci_2290 Delftia acidovorans SPH-1 hypothetical protein YP_001563314.1 2517422 R 398578 CDS YP_001563315.1 160897733 5747854 complement(2518599..2519531) 1 NC_010002.1 KEGG: hch:HCH_06792 hypothetical protein; hypothetical protein 2519531 5747854 Daci_2291 Delftia acidovorans SPH-1 hypothetical protein YP_001563315.1 2518599 R 398578 CDS YP_001563316.1 160897734 5747855 complement(2519590..2520417) 1 NC_010002.1 hypothetical protein 2520417 5747855 Daci_2292 Delftia acidovorans SPH-1 hypothetical protein YP_001563316.1 2519590 R 398578 CDS YP_001563317.1 160897735 5747856 2520777..2522021 1 NC_010002.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: bur:Bcep18194_A5901 cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase 2522021 5747856 Daci_2293 Delftia acidovorans SPH-1 cyclopropane-fatty-acyl-phospholipid synthase YP_001563317.1 2520777 D 398578 CDS YP_001563318.1 160897736 5747857 2522509..2523282 1 NC_010002.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bbr:BB1991 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 2523282 5747857 Daci_2294 Delftia acidovorans SPH-1 short-chain dehydrogenase/reductase SDR YP_001563318.1 2522509 D 398578 CDS YP_001563319.1 160897737 5747858 2523328..2524272 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bpa:BPP2545 LysR family regulatory protein; LysR family transcriptional regulator 2524272 5747858 Daci_2295 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001563319.1 2523328 D 398578 CDS YP_001563320.1 160897738 5747859 complement(2524226..2525350) 1 NC_010002.1 PFAM: fatty acid hydroxylase; KEGG: bvi:Bcep1808_2232 sterol desaturase-like protein; fatty acid hydroxylase 2525350 5747859 Daci_2296 Delftia acidovorans SPH-1 fatty acid hydroxylase YP_001563320.1 2524226 R 398578 CDS YP_001563321.1 160897739 5747860 complement(2525674..2527794) 1 NC_010002.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: reu:Reut_C6419 peptidase S8 and S53, subtilisin, kexin, sedolisin; peptidase S8/S53 subtilisin kexin sedolisin 2527794 5747860 Daci_2297 Delftia acidovorans SPH-1 peptidase S8/S53 subtilisin kexin sedolisin YP_001563321.1 2525674 R 398578 CDS YP_001563322.1 160897740 5747861 complement(2527853..2528890) 1 NC_010002.1 PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: reu:Reut_C6418 AAA ATPase, central region; ATPase central domain-containing protein 2528890 5747861 Daci_2298 Delftia acidovorans SPH-1 ATPase central domain-containing protein YP_001563322.1 2527853 R 398578 CDS YP_001563323.1 160897741 5747863 2530033..2530866 1 NC_010002.1 KEGG: bps:BPSL0569 hypothetical protein; hypothetical protein 2530866 5747863 Daci_2300 Delftia acidovorans SPH-1 hypothetical protein YP_001563323.1 2530033 D 398578 CDS YP_001563324.1 160897742 5747864 2530874..2531629 1 NC_010002.1 KEGG: bps:BPSL0570 hypothetical protein; hypothetical protein 2531629 5747864 Daci_2301 Delftia acidovorans SPH-1 hypothetical protein YP_001563324.1 2530874 D 398578 CDS YP_001563325.1 160897743 5747865 2531610..2533295 1 NC_010002.1 KEGG: bps:BPSL0571 hypothetical protein; Mn2+-dependent serine/threonine protein kinase 2533295 5747865 Daci_2302 Delftia acidovorans SPH-1 Mn2+-dependent serine/threonine protein kinase YP_001563325.1 2531610 D 398578 CDS YP_001563326.1 160897744 5747866 2533365..2534183 1 NC_010002.1 hypothetical protein 2534183 5747866 Daci_2303 Delftia acidovorans SPH-1 hypothetical protein YP_001563326.1 2533365 D 398578 CDS YP_001563327.1 160897745 5747867 complement(2534597..2534992) 1 NC_010002.1 PFAM: helix-turn-helix domain protein; KEGG: pau:PA14_31160 hypothetical protein; XRE family transcriptional regulator 2534992 5747867 Daci_2304 Delftia acidovorans SPH-1 XRE family transcriptional regulator YP_001563327.1 2534597 R 398578 CDS YP_001563328.1 160897746 5747868 2535050..2535433 1 NC_010002.1 hypothetical protein 2535433 5747868 Daci_2305 Delftia acidovorans SPH-1 hypothetical protein YP_001563328.1 2535050 D 398578 CDS YP_001563329.1 160897747 5747869 complement(2535466..2535816) 1 NC_010002.1 SMART: regulatory protein ArsR; KEGG: bbr:BB1287 putative regulatory protein; ArsR family transcriptional regulator 2535816 5747869 Daci_2306 Delftia acidovorans SPH-1 ArsR family transcriptional regulator YP_001563329.1 2535466 R 398578 CDS YP_001563330.1 160897748 5747870 2536077..2538179 1 NC_010002.1 TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; KEGG: ajs:Ajs_0275 translation elongation factor G; translation elongation factor G 2538179 5747870 Daci_2307 Delftia acidovorans SPH-1 translation elongation factor G YP_001563330.1 2536077 D 398578 CDS YP_001563331.1 160897749 5747871 complement(2538467..2539654) 1 NC_010002.1 PFAM: Integrase catalytic region; KEGG: ppf:Pput_3520 integrase, catalytic region; integrase catalytic subunit 2539654 5747871 Daci_2308 Delftia acidovorans SPH-1 integrase catalytic subunit YP_001563331.1 2538467 R 398578 CDS YP_001563332.1 160897750 5747872 complement(2539932..2540846) 1 NC_010002.1 PFAM: inositol monophosphatase; KEGG: ajs:Ajs_1045 inositol-phosphate phosphatase; inositol-phosphate phosphatase 2540846 5747872 Daci_2309 Delftia acidovorans SPH-1 inositol-phosphate phosphatase YP_001563332.1 2539932 R 398578 CDS YP_001563333.1 160897751 5747873 2541063..2541890 1 NC_010002.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: ajs:Ajs_1046 RNA methyltransferase, TrmH family, group 1; tRNA/rRNA methyltransferase SpoU 2541890 5747873 Daci_2310 Delftia acidovorans SPH-1 tRNA/rRNA methyltransferase SpoU YP_001563333.1 2541063 D 398578 CDS YP_001563334.1 160897752 5747874 2541926..2542750 1 NC_010002.1 TIGRFAM: serine O-acetyltransferase; KEGG: aav:Aave_2076 serine O-acetyltransferase; serine O-acetyltransferase 2542750 5747874 Daci_2311 Delftia acidovorans SPH-1 serine O-acetyltransferase YP_001563334.1 2541926 D 398578 CDS YP_001563335.1 160897753 5747875 2542813..2543475 1 NC_010002.1 PFAM: nitroreductase; KEGG: ajs:Ajs_1048 nitroreductase; nitroreductase 2543475 5747875 Daci_2312 Delftia acidovorans SPH-1 nitroreductase YP_001563335.1 2542813 D 398578 CDS YP_001563336.1 160897754 5747876 2543930..2545873 1 NC_010002.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 2545873 5747876 Daci_2313 Delftia acidovorans SPH-1 thiamine biosynthesis protein ThiC YP_001563336.1 2543930 D 398578 CDS YP_001563337.1 160897755 5747877 2546209..2547261 1 NC_010002.1 PFAM: porin Gram-negative type; KEGG: rso:RSc2760 putative porin signal peptide protein; porin 2547261 5747877 Daci_2314 Delftia acidovorans SPH-1 porin YP_001563337.1 2546209 D 398578 CDS YP_001563338.1 160897756 5747878 complement(2547285..2548670) 1 NC_010002.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_B0723 RND efflux system, outer membrane lipoprotein, NodT family; RND efflux system outer membrane lipoprotein 2548670 5747878 Daci_2315 Delftia acidovorans SPH-1 RND efflux system outer membrane lipoprotein YP_001563338.1 2547285 R 398578 CDS YP_001563339.1 160897757 5747879 complement(2548672..2550618) 1 NC_010002.1 PFAM: ABC transporter related; protein of unknown function DUF214; SMART: AAA ATPase; KEGG: shn:Shewana3_3455 ABC transporter related; ABC transporter-like protein 2550618 5747879 Daci_2316 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001563339.1 2548672 R 398578 CDS YP_001563340.1 160897758 5747880 complement(2550621..2551802) 1 NC_010002.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bpl:BURPS1106A_A0836 macrolide efflux protein MacA; RND family efflux transporter MFP subunit 2551802 5747880 Daci_2317 Delftia acidovorans SPH-1 RND family efflux transporter MFP subunit YP_001563340.1 2550621 R 398578 CDS YP_001563341.1 160897759 5747881 complement(2551992..2553203) 1 NC_010002.1 KEGG: aav:Aave_1283 putative substrate-binding periplasmic (pbp) ABC transporter protein; putative substrate-binding periplasmic (pbp) ABC transporter protein 2553203 5747881 Daci_2318 Delftia acidovorans SPH-1 putative substrate-binding periplasmic (pbp) ABC transporter protein YP_001563341.1 2551992 R 398578 CDS YP_001563342.1 160897760 5747882 2553526..2554212 1 NC_010002.1 PFAM: helix-turn-helix domain protein; KEGG: tbd:Tbd_1344 transcriptional regulator, XRE family; XRE family transcriptional regulator 2554212 5747882 Daci_2319 Delftia acidovorans SPH-1 XRE family transcriptional regulator YP_001563342.1 2553526 D 398578 CDS YP_001563343.1 160897761 5747883 2554193..2554729 1 NC_010002.1 KEGG: reh:H16_B0351 conserved hypothetical protein; hypothetical protein 2554729 5747883 Daci_2320 Delftia acidovorans SPH-1 hypothetical protein YP_001563343.1 2554193 D 398578 CDS YP_001563344.1 160897762 5747884 complement(2554773..2555378) 1 NC_010002.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; KEGG: ajs:Ajs_1051 molybdenum cofactor synthesis domain; molybdenum cofactor synthesis domain-containing protein 2555378 5747884 Daci_2321 Delftia acidovorans SPH-1 molybdenum cofactor synthesis domain-containing protein YP_001563344.1 2554773 R 398578 CDS YP_001563345.1 160897763 5747885 complement(2555371..2556048) 1 NC_010002.1 PFAM: protein of unknown function DUF615; KEGG: aav:Aave_2078 protein of unknown function DUF615; hypothetical protein 2556048 5747885 Daci_2322 Delftia acidovorans SPH-1 hypothetical protein YP_001563345.1 2555371 R 398578 CDS YP_001563346.1 160897764 5747886 2556115..2557524 1 NC_010002.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: ajs:Ajs_1053 peptidase U62, modulator of DNA gyrase; peptidase U62 modulator of DNA gyrase 2557524 5747886 Daci_2323 Delftia acidovorans SPH-1 peptidase U62 modulator of DNA gyrase YP_001563346.1 2556115 D 398578 CDS YP_001563347.1 160897765 5747887 complement(2557579..2558418) 1 NC_010002.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: pde:Pden_2753 5-carboxymethyl-2-hydroxymuconate delta-isomerase; 5-carboxymethyl-2-hydroxymuconate delta-isomerase 2558418 5747887 Daci_2324 Delftia acidovorans SPH-1 5-carboxymethyl-2-hydroxymuconate delta-isomerase YP_001563347.1 2557579 R 398578 CDS YP_001563348.1 160897766 5747888 2558777..2560504 1 NC_010002.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: aav:Aave_4495 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2560504 5747888 Daci_2325 Delftia acidovorans SPH-1 methyl-accepting chemotaxis sensory transducer YP_001563348.1 2558777 D 398578 CDS YP_001563349.1 160897767 5747889 complement(2560559..2563942) 1 NC_010002.1 PFAM: MscS Mechanosensitive ion channel; KEGG: pmy:Pmen_0559 MscS mechanosensitive ion channel; mechanosensitive ion channel protein MscS 2563942 5747889 Daci_2326 Delftia acidovorans SPH-1 mechanosensitive ion channel protein MscS YP_001563349.1 2560559 R 398578 CDS YP_001563350.1 160897768 5747890 2564315..2566237 1 NC_010002.1 PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: mpt:Mpe_A3779 hypothetical protein; putative serine protein kinase PrkA 2566237 5747890 Daci_2327 Delftia acidovorans SPH-1 putative serine protein kinase PrkA YP_001563350.1 2564315 D 398578 CDS YP_001563351.1 160897769 5747891 2566284..2567552 1 NC_010002.1 PFAM: protein of unknown function DUF444; KEGG: mpt:Mpe_A3778 hypothetical protein; hypothetical protein 2567552 5747891 Daci_2328 Delftia acidovorans SPH-1 hypothetical protein YP_001563351.1 2566284 D 398578 CDS YP_001563352.1 160897770 5747892 2567549..2569177 1 NC_010002.1 PFAM: SpoVR family protein; KEGG: mpt:Mpe_A3777 hypothetical protein; SpoVR family protein 2569177 5747892 Daci_2329 Delftia acidovorans SPH-1 SpoVR family protein YP_001563352.1 2567549 D 398578 CDS YP_001563353.1 160897771 5747893 complement(2569190..2569498) 1 NC_010002.1 KEGG: rme:Rmet_1299 hypothetical protein; hypothetical protein 2569498 5747893 Daci_2330 Delftia acidovorans SPH-1 hypothetical protein YP_001563353.1 2569190 R 398578 CDS YP_001563354.1 160897772 5747894 complement(2569561..2570901) 1 NC_010002.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: pna:Pnap_0178 ammonium transporter; ammonium transporter 2570901 5747894 Daci_2331 Delftia acidovorans SPH-1 ammonium transporter YP_001563354.1 2569561 R 398578 CDS YP_001563355.1 160897773 5747895 2571131..2571931 1 NC_010002.1 PFAM: penicillin-binding protein transpeptidase; KEGG: syn:slr0319 beta-lactamase; beta-lactamase 2571931 5747895 Daci_2332 Delftia acidovorans SPH-1 beta-lactamase YP_001563355.1 2571131 D 398578 CDS YP_001563356.1 160897774 5747896 complement(2571986..2572726) 1 NC_010002.1 PFAM: protein of unknown function DUF159; KEGG: pna:Pnap_1661 protein of unknown function DUF159; hypothetical protein 2572726 5747896 Daci_2333 Delftia acidovorans SPH-1 hypothetical protein YP_001563356.1 2571986 R 398578 CDS YP_001563357.1 160897775 5747897 complement(2572796..2573641) 1 NC_010002.1 TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: psa:PST_2727 phenazine biosynthesis protein, PhzF family; PhzF family phenazine biosynthesis protein 2573641 5747897 Daci_2334 Delftia acidovorans SPH-1 PhzF family phenazine biosynthesis protein YP_001563357.1 2572796 R 398578 CDS YP_001563358.1 160897776 5747898 complement(2573801..2575465) 1 NC_010002.1 KEGG: saz:Sama_0272 hypothetical protein; hypothetical protein 2575465 5747898 Daci_2335 Delftia acidovorans SPH-1 hypothetical protein YP_001563358.1 2573801 R 398578 CDS YP_001563359.1 160897777 5747899 2575642..2576610 1 NC_010002.1 PFAM: regulatory protein LuxR; KEGG: rpb:RPB_1819 transcriptional regulator, LuxR family; LuxR family transcriptional regulator 2576610 5747899 Daci_2336 Delftia acidovorans SPH-1 LuxR family transcriptional regulator YP_001563359.1 2575642 D 398578 CDS YP_001563360.1 160897778 5747900 2576693..2577292 1 NC_010002.1 PFAM: regulatory protein TetR; KEGG: tbd:Tbd_1984 possible transcriptional regulator, TetR family; TetR family transcriptional regulator 2577292 5747900 Daci_2337 Delftia acidovorans SPH-1 TetR family transcriptional regulator YP_001563360.1 2576693 D 398578 CDS YP_001563361.1 160897779 5747901 2577371..2578561 1 NC_010002.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bpd:BURPS668_1706 oxidoreductase, pyridine nucleotide-disulphide family; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2578561 5747901 Daci_2338 Delftia acidovorans SPH-1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001563361.1 2577371 D 398578 CDS YP_001563362.1 160897780 5747902 2578613..2579041 1 NC_010002.1 PFAM: protein of unknown function DUF1641; KEGG: pfl:PFL_1327 hypothetical protein; hypothetical protein 2579041 5747902 Daci_2339 Delftia acidovorans SPH-1 hypothetical protein YP_001563362.1 2578613 D 398578 CDS YP_001563363.1 160897781 5747903 2579226..2580137 1 NC_010002.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ajs:Ajs_1054 protein of unknown function DUF6, transmembrane; hypothetical protein 2580137 5747903 Daci_2340 Delftia acidovorans SPH-1 hypothetical protein YP_001563363.1 2579226 D 398578 CDS YP_001563364.1 160897782 5747904 2580382..2580708 1 NC_010002.1 KEGG: bbr:BB3605 putative iron uptake protein; putative iron uptake protein 2580708 5747904 Daci_2341 Delftia acidovorans SPH-1 putative iron uptake protein YP_001563364.1 2580382 D 398578 CDS YP_001563365.1 160897783 5747905 2580705..2582357 1 NC_010002.1 KEGG: bbr:BB4741 putative iron-regulated membrane protein; putative iron-regulated membrane protein 2582357 5747905 Daci_2342 Delftia acidovorans SPH-1 putative iron-regulated membrane protein YP_001563365.1 2580705 D 398578 CDS YP_001563366.1 160897784 5747906 2582354..2582686 1 NC_010002.1 KEGG: bbr:BB4740 hypothetical protein; hypothetical protein 2582686 5747906 Daci_2343 Delftia acidovorans SPH-1 hypothetical protein YP_001563366.1 2582354 D 398578 CDS YP_001563367.1 160897785 5747907 2582952..2584163 1 NC_010002.1 TIGRFAM: extracellular repeat protein, HAF family; KEGG: fra:Francci3_4152 hypothetical protein; HAF family protein 2584163 5747907 Daci_2344 Delftia acidovorans SPH-1 HAF family protein YP_001563367.1 2582952 D 398578 CDS YP_001563368.1 160897786 5747908 complement(2584559..2585365) 1 NC_010002.1 KEGG: aav:Aave_2080 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; TIGRFAM: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; PFAM: HpcH/HpaI aldolase; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 2585365 5747908 Daci_2345 Delftia acidovorans SPH-1 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase YP_001563368.1 2584559 R 398578 CDS YP_001563369.1 160897787 5747909 complement(2585396..2586883) 1 NC_010002.1 TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: aav:Aave_2081 succinic semialdehyde dehydrogenase; succinate-semialdehyde dehydrogenase 2586883 5747909 Daci_2346 Delftia acidovorans SPH-1 succinate-semialdehyde dehydrogenase YP_001563369.1 2585396 R 398578 CDS YP_001563370.1 160897788 5747910 complement(2586918..2588447) 1 NC_010002.1 PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; KEGG: aav:Aave_2082 galactarate dehydratase; galactarate dehydratase 2588447 5747910 Daci_2347 Delftia acidovorans SPH-1 galactarate dehydratase YP_001563370.1 2586918 R 398578 CDS YP_001563371.1 160897789 5747911 complement(2588481..2589476) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: aav:Aave_2083 uncharacterized protein UPF0065; hypothetical protein 2589476 5747911 Daci_2348 Delftia acidovorans SPH-1 hypothetical protein YP_001563371.1 2588481 R 398578 CDS YP_001563372.1 160897790 5747912 2589614..2590585 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_2084 transcriptional regulator, LysR family; LysR family transcriptional regulator 2590585 5747912 Daci_2349 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001563372.1 2589614 D 398578 CDS YP_001563373.1 160897791 5747913 2591338..2591745 1 NC_010002.1 hypothetical protein 2591745 5747913 Daci_2350 Delftia acidovorans SPH-1 hypothetical protein YP_001563373.1 2591338 D 398578 CDS YP_001563374.1 160897792 5747914 2591774..2592217 1 NC_010002.1 hypothetical protein 2592217 5747914 Daci_2351 Delftia acidovorans SPH-1 hypothetical protein YP_001563374.1 2591774 D 398578 CDS YP_001563375.1 160897793 5747915 complement(2592394..2592714) 1 NC_010002.1 PFAM: ferredoxin; KEGG: pla:Plav_2520 ferredoxin; ferredoxin 2592714 5747915 Daci_2352 Delftia acidovorans SPH-1 ferredoxin YP_001563375.1 2592394 R 398578 CDS YP_001563376.1 160897794 5747916 complement(2592711..2593946) 1 NC_010002.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: ccr:CC_3525 ferredoxin reductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2593946 5747916 Daci_2353 Delftia acidovorans SPH-1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001563376.1 2592711 R 398578 CDS YP_001563377.1 160897795 5747917 complement(2593943..2594995) 1 NC_010002.1 KEGG: mms:mma_1224 hypothetical protein; hypothetical protein 2594995 5747917 Daci_2354 Delftia acidovorans SPH-1 hypothetical protein YP_001563377.1 2593943 R 398578 CDS YP_001563378.1 160897796 5747918 complement(2595564..2595908) 1 NC_010002.1 hypothetical protein 2595908 5747918 Daci_2355 Delftia acidovorans SPH-1 hypothetical protein YP_001563378.1 2595564 R 398578 CDS YP_001563379.1 160897797 5747919 complement(2596027..2597424) 1 NC_010002.1 TIGRFAM: glutathione-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: ecp:ECP_3590 glutathione reductase; glutathione-disulfide reductase 2597424 5747919 Daci_2356 Delftia acidovorans SPH-1 glutathione-disulfide reductase YP_001563379.1 2596027 R 398578 CDS YP_001563380.1 160897798 5747920 complement(2597489..2599075) 1 NC_010002.1 KEGG: pau:PA14_13330 putative phosphatase or phosphodiesterase; putative phosphatase or phosphodiesterase 2599075 5747920 Daci_2357 Delftia acidovorans SPH-1 putative phosphatase or phosphodiesterase YP_001563380.1 2597489 R 398578 CDS YP_001563381.1 160897799 5747921 2599207..2600451 1 NC_010002.1 KEGG: bxe:Bxe_B0543 hypothetical protein; hypothetical protein 2600451 5747921 Daci_2358 Delftia acidovorans SPH-1 hypothetical protein YP_001563381.1 2599207 D 398578 CDS YP_001563382.1 160897800 5747922 2600484..2601140 1 NC_010002.1 KEGG: reu:Reut_A3203 hypothetical protein; hypothetical protein 2601140 5747922 Daci_2359 Delftia acidovorans SPH-1 hypothetical protein YP_001563382.1 2600484 D 398578 CDS YP_001563383.1 160897801 5747923 complement(2601144..2602232) 1 NC_010002.1 KEGG: ajs:Ajs_2860 tartrate dehydrogenase; TIGRFAM: tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; tartrate dehydrogenase 2602232 5747923 Daci_2360 Delftia acidovorans SPH-1 tartrate dehydrogenase YP_001563383.1 2601144 R 398578 CDS YP_001563384.1 160897802 5747924 2602297..2603277 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_2088 transcriptional regulator, LysR family; LysR family transcriptional regulator 2603277 5747924 Daci_2361 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001563384.1 2602297 D 398578 CDS YP_001563385.1 160897803 5747925 complement(2603303..2603749) 1 NC_010002.1 KEGG: aav:Aave_2091 GatB/YqeY domain protein; GatB/YqeY domain-containing protein 2603749 5747925 Daci_2362 Delftia acidovorans SPH-1 GatB/YqeY domain-containing protein YP_001563385.1 2603303 R 398578 CDS YP_001563386.1 160897804 5747926 complement(2603872..2604084) 1 NC_010002.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 2604084 rpsU 5747926 rpsU Delftia acidovorans SPH-1 30S ribosomal protein S21 YP_001563386.1 2603872 R 398578 CDS YP_001563387.1 160897805 5747927 complement(2604250..2605470) 1 NC_010002.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ajs:Ajs_2846 HI0933 family protein; hypothetical protein 2605470 5747927 Daci_2364 Delftia acidovorans SPH-1 hypothetical protein YP_001563387.1 2604250 R 398578 CDS YP_001563388.1 160897806 5747928 2605537..2606043 1 NC_010002.1 PFAM: thioesterase superfamily protein; KEGG: ajs:Ajs_2844 thioesterase superfamily protein; thioesterase superfamily protein 2606043 5747928 Daci_2365 Delftia acidovorans SPH-1 thioesterase superfamily protein YP_001563388.1 2605537 D 398578 CDS YP_001563389.1 160897807 5747929 complement(2606030..2608123) 1 NC_010002.1 KEGG: pap:PSPA7_4410 virulence sensor protein BvgS; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: extracellular solute-binding protein family 3; histidine kinase 2608123 5747929 Daci_2366 Delftia acidovorans SPH-1 histidine kinase YP_001563389.1 2606030 R 398578 CDS YP_001563390.1 160897808 5747930 complement(2608148..2609071) 1 NC_010002.1 SMART: extracellular solute-binding protein family 3; KEGG: pap:PSPA7_4410 virulence sensor protein BvgS; extracellular solute-binding protein 2609071 5747930 Daci_2367 Delftia acidovorans SPH-1 extracellular solute-binding protein YP_001563390.1 2608148 R 398578 CDS YP_001563391.1 160897809 5747931 complement(2609221..2610033) 1 NC_010002.1 TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: ajs:Ajs_2843 uroporphyrin-III C-methyltransferase; uroporphyrin-III C-methyltransferase 2610033 5747931 Daci_2368 Delftia acidovorans SPH-1 uroporphyrin-III C-methyltransferase YP_001563391.1 2609221 R 398578 CDS YP_001563392.1 160897810 5747932 complement(2610061..2611011) 1 NC_010002.1 PFAM: glycosyl transferase family 3; KEGG: ajs:Ajs_2842 glycosyl transferase, family 3; glycosyl transferase family protein 2611011 5747932 Daci_2369 Delftia acidovorans SPH-1 glycosyl transferase family protein YP_001563392.1 2610061 R 398578 CDS YP_001563393.1 160897811 5747933 complement(2611061..2613925) 1 NC_010002.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: ajs:Ajs_2841 molybdopterin oxidoreductase; molybdopterin oxidoreductase 2613925 5747933 Daci_2370 Delftia acidovorans SPH-1 molybdopterin oxidoreductase YP_001563393.1 2611061 R 398578 CDS YP_001563394.1 160897812 5747934 complement(2613976..2615256) 1 NC_010002.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ajs:Ajs_2839 nitrite reductase (NAD(P)H), large subunit; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2615256 5747934 Daci_2371 Delftia acidovorans SPH-1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001563394.1 2613976 R 398578 CDS YP_001563395.1 160897813 5747935 2615672..2617411 1 NC_010002.1 KEGG: aav:Aave_2113 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; TIGRFAM: PAS sensor protein; PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; Pas/Pac sensor-containing methyl-accepting chemotaxis sensory transducer 2617411 5747935 Daci_2372 Delftia acidovorans SPH-1 Pas/Pac sensor-containing methyl-accepting chemotaxis sensory transducer YP_001563395.1 2615672 D 398578 CDS YP_001563396.1 160897814 5747936 2617542..2618195 1 NC_010002.1 KEGG: ajs:Ajs_2835 hypothetical protein; hypothetical protein 2618195 5747936 Daci_2373 Delftia acidovorans SPH-1 hypothetical protein YP_001563396.1 2617542 D 398578 CDS YP_001563397.1 160897815 5747937 2618318..2618758 1 NC_010002.1 PFAM: CBS domain containing protein; KEGG: aav:Aave_2114 CBS domain containing membrane protein; signal-transduction protein 2618758 5747937 Daci_2374 Delftia acidovorans SPH-1 signal-transduction protein YP_001563397.1 2618318 D 398578 CDS YP_001563398.1 160897816 5747938 complement(2618819..2619625) 1 NC_010002.1 KEGG: ajs:Ajs_2833 nitrate ABC transporter, ATPase subunits C and D; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; SMART: AAA ATPase; nitrate ABC transporter ATPases C and D 2619625 5747938 Daci_2375 Delftia acidovorans SPH-1 nitrate ABC transporter ATPases C and D YP_001563398.1 2618819 R 398578 CDS YP_001563399.1 160897817 5747939 complement(2619622..2620563) 1 NC_010002.1 TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_2146 nitrate ABC transporter, inner membrane subunit; nitrate ABC transporter inner membrane subunit 2620563 5747939 Daci_2376 Delftia acidovorans SPH-1 nitrate ABC transporter inner membrane subunit YP_001563399.1 2619622 R 398578 CDS YP_001563400.1 160897818 5747940 complement(2620604..2621884) 1 NC_010002.1 KEGG: ajs:Ajs_2831 twin-arginine translocation pathway signal; twin-arginine translocation pathway signal protein 2621884 5747940 Daci_2377 Delftia acidovorans SPH-1 twin-arginine translocation pathway signal protein YP_001563400.1 2620604 R 398578 CDS YP_001563401.1 160897819 5747941 complement(2622194..2623459) 1 NC_010002.1 PFAM: ANTAR domain protein; Nitrate and nitrite sensing domain protein; KEGG: azo:azo0941 probable nitrate regulatory protein; response regulator receiver/ANTAR domain-containing protein 2623459 5747941 Daci_2378 Delftia acidovorans SPH-1 response regulator receiver/ANTAR domain-containing protein YP_001563401.1 2622194 R 398578 CDS YP_001563402.1 160897820 5747942 2623792..2625513 1 NC_010002.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: aav:Aave_1490 diguanylate cyclase/phosphodiesterase; diguanylate cyclase/phosphodiesterase 2625513 5747942 Daci_2379 Delftia acidovorans SPH-1 diguanylate cyclase/phosphodiesterase YP_001563402.1 2623792 D 398578 CDS YP_001563403.1 160897821 5747943 2625604..2626644 1 NC_010002.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; putative DNA-binding/iron metalloprotein/AP endonuclease 2626644 5747943 Daci_2380 Delftia acidovorans SPH-1 putative DNA-binding/iron metalloprotein/AP endonuclease YP_001563403.1 2625604 D 398578 CDS YP_001563404.1 160897822 5747944 complement(2626825..2627205) 1 NC_010002.1 KEGG: vei:Veis_1656 heat shock protein HSP20; heat shock protein HSP20 2627205 5747944 Daci_2381 Delftia acidovorans SPH-1 heat shock protein HSP20 YP_001563404.1 2626825 R 398578 CDS YP_001563405.1 160897823 5747945 2627304..2628614 1 NC_010002.1 KEGG: aav:Aave_2154 putative transporter signal peptide protein; putative transporter signal peptide protein 2628614 5747945 Daci_2382 Delftia acidovorans SPH-1 putative transporter signal peptide protein YP_001563405.1 2627304 D 398578 CDS YP_001563406.1 160897824 5747946 complement(2628642..2629820) 1 NC_010002.1 TIGRFAM: lytic murein transglycosylase B; KEGG: ajs:Ajs_2817 lytic murein transglycosylase B; lytic murein transglycosylase B 2629820 5747946 Daci_2383 Delftia acidovorans SPH-1 lytic murein transglycosylase B YP_001563406.1 2628642 R 398578 CDS YP_001563407.1 160897825 5747947 complement(2629817..2631997) 1 NC_010002.1 PFAM: transglutaminase domain protein; KEGG: ajs:Ajs_2816 transglutaminase domain protein; transglutaminase domain-containing protein 2631997 5747947 Daci_2384 Delftia acidovorans SPH-1 transglutaminase domain-containing protein YP_001563407.1 2629817 R 398578 CDS YP_001563408.1 160897826 5747948 complement(2631994..2633028) 1 NC_010002.1 PFAM: protein of unknown function DUF58; KEGG: ajs:Ajs_2815 protein of unknown function DUF58; hypothetical protein 2633028 5747948 Daci_2385 Delftia acidovorans SPH-1 hypothetical protein YP_001563408.1 2631994 R 398578 CDS YP_001563409.1 160897827 5747949 complement(2633028..2633948) 1 NC_010002.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: ajs:Ajs_2814 ATPase associated with various cellular activities, AAA_3; ATPase 2633948 5747949 Daci_2386 Delftia acidovorans SPH-1 ATPase YP_001563409.1 2633028 R 398578 CDS YP_001563410.1 160897828 5747950 2633991..2634944 1 NC_010002.1 PFAM: histone deacetylase superfamily; KEGG: aav:Aave_2164 histone deacetylase superfamily; histone deacetylase superfamily protein 2634944 5747950 Daci_2387 Delftia acidovorans SPH-1 histone deacetylase superfamily protein YP_001563410.1 2633991 D 398578 CDS YP_001563411.1 160897829 5747951 2634962..2635771 1 NC_010002.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ajs:Ajs_2812 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 2635771 5747951 Daci_2388 Delftia acidovorans SPH-1 enoyl-CoA hydratase/isomerase YP_001563411.1 2634962 D 398578 CDS YP_001563412.1 160897830 5747952 2635864..2637153 1 NC_010002.1 PFAM: MscS Mechanosensitive ion channel; KEGG: aav:Aave_2167 MscS mechanosensitive ion channel; mechanosensitive ion channel protein MscS 2637153 5747952 Daci_2389 Delftia acidovorans SPH-1 mechanosensitive ion channel protein MscS YP_001563412.1 2635864 D 398578 CDS YP_001563413.1 160897831 5747953 2637363..2638112 1 NC_010002.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: ajs:Ajs_2810 electron transfer flavoprotein beta-subunit; electron transfer flavoprotein subunit alpha/beta 2638112 5747953 Daci_2390 Delftia acidovorans SPH-1 electron transfer flavoprotein subunit alpha/beta YP_001563413.1 2637363 D 398578 CDS YP_001563414.1 160897832 5747954 2638126..2639058 1 NC_010002.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: ajs:Ajs_2809 electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein subunit alpha 2639058 5747954 Daci_2391 Delftia acidovorans SPH-1 electron transfer flavoprotein subunit alpha YP_001563414.1 2638126 D 398578 CDS YP_001563415.1 160897833 5747955 2639213..2640355 1 NC_010002.1 PFAM: Extracellular ligand-binding receptor; KEGG: pol:Bpro_4388 extracellular ligand-binding receptor; extracellular ligand-binding receptor 2640355 5747955 Daci_2392 Delftia acidovorans SPH-1 extracellular ligand-binding receptor YP_001563415.1 2639213 D 398578 CDS YP_001563416.1 160897834 5747956 2640453..2642243 1 NC_010002.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_2808 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 2642243 5747956 Daci_2393 Delftia acidovorans SPH-1 acyl-CoA dehydrogenase domain-containing protein YP_001563416.1 2640453 D 398578 CDS YP_001563417.1 160897835 5747957 2642304..2643263 1 NC_010002.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: ajs:Ajs_2807 2-nitropropane dioxygenase, NPD; 2-nitropropane dioxygenase 2643263 5747957 Daci_2394 Delftia acidovorans SPH-1 2-nitropropane dioxygenase YP_001563417.1 2642304 D 398578 CDS YP_001563418.1 160897836 5747958 2643499..2645196 1 NC_010002.1 KEGG: mms:mma_2016 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; cysteine ABC transporter permease/ATP-binding protein 2645196 5747958 Daci_2395 Delftia acidovorans SPH-1 cysteine ABC transporter permease/ATP-binding protein YP_001563418.1 2643499 D 398578 CDS YP_001563419.1 160897837 5747959 2645193..2646878 1 NC_010002.1 KEGG: mms:mma_2015 ATP-binding component of cytochrome-related transport system; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter related; SMART: AAA ATPase; cysteine ABC transporter permease/ATP-binding protein 2646878 5747959 Daci_2396 Delftia acidovorans SPH-1 cysteine ABC transporter permease/ATP-binding protein YP_001563419.1 2645193 D 398578 CDS YP_001563420.1 160897838 5747960 2646921..2648507 1 NC_010002.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: oan:Oant_3541 cytochrome bd ubiquinol oxidase subunit I; cytochrome bd ubiquinol oxidase subunit I 2648507 5747960 Daci_2397 Delftia acidovorans SPH-1 cytochrome bd ubiquinol oxidase subunit I YP_001563420.1 2646921 D 398578 CDS YP_001563421.1 160897839 5747961 2648526..2649677 1 NC_010002.1 KEGG: har:HEAR1375 cytochrome d terminal oxidase, polypeptide subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; cytochrome d ubiquinol oxidase subunit II 2649677 5747961 Daci_2398 Delftia acidovorans SPH-1 cytochrome d ubiquinol oxidase subunit II YP_001563421.1 2648526 D 398578 CDS YP_001563422.1 160897840 5747962 2649727..2649852 1 NC_010002.1 TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein; KEGG: har:HEAR1376 conserved hypothetical protein: putative YbgT protein of unknown function; putative signal peptide; cyd operon protein YbgT 2649852 5747962 Daci_2399 Delftia acidovorans SPH-1 cyd operon protein YbgT YP_001563422.1 2649727 D 398578 CDS YP_001563423.1 160897841 5747963 complement(2650052..2650648) 1 NC_010002.1 KEGG: mpt:Mpe_A2572 putative transcriptional regulator ArsR family; ArsR family transcriptional regulator 2650648 5747963 Daci_2400 Delftia acidovorans SPH-1 ArsR family transcriptional regulator YP_001563423.1 2650052 R 398578 CDS YP_001563424.1 160897842 5747964 2650810..2651967 1 NC_010002.1 PFAM: acyltransferase 3; KEGG: ajs:Ajs_2806 acyltransferase 3; acyltransferase 3 2651967 5747964 Daci_2401 Delftia acidovorans SPH-1 acyltransferase 3 YP_001563424.1 2650810 D 398578 CDS YP_001563425.1 160897843 5747965 complement(2652041..2652445) 1 NC_010002.1 PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: ajs:Ajs_2805 GreA/GreB family elongation factor; GreA/GreB family elongation factor 2652445 5747965 Daci_2402 Delftia acidovorans SPH-1 GreA/GreB family elongation factor YP_001563425.1 2652041 R 398578 CDS YP_001563426.1 160897844 5747966 2652713..2653882 1 NC_010002.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: aav:Aave_2176 radical SAM domain protein; radical SAM domain-containing protein 2653882 5747966 Daci_2403 Delftia acidovorans SPH-1 radical SAM domain-containing protein YP_001563426.1 2652713 D 398578 CDS YP_001563427.1 160897845 5747967 complement(2653920..2654795) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bbr:BB2682 probable LysR-family transcriptional regulator; LysR family transcriptional regulator 2654795 5747967 Daci_2404 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001563427.1 2653920 R 398578 CDS YP_001563428.1 160897846 5747968 2654893..2656017 1 NC_010002.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bbr:BB2683 putative racemase; mandelate racemase/muconate lactonizing protein 2656017 5747968 Daci_2405 Delftia acidovorans SPH-1 mandelate racemase/muconate lactonizing protein YP_001563428.1 2654893 D 398578 CDS YP_001563429.1 160897847 5747969 2656053..2657027 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: pol:Bpro_2752 uncharacterized protein UPF0065; hypothetical protein 2657027 5747969 Daci_2406 Delftia acidovorans SPH-1 hypothetical protein YP_001563429.1 2656053 D 398578 CDS YP_001563430.1 160897848 5747970 complement(2657059..2657910) 1 NC_010002.1 PFAM: regulatory protein MarR; regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B2552 transcriptional regulator, LysR family; MarR family transcriptional regulator 2657910 5747970 Daci_2407 Delftia acidovorans SPH-1 MarR family transcriptional regulator YP_001563430.1 2657059 R 398578 CDS YP_001563431.1 160897849 5747971 2657942..2658979 1 NC_010002.1 TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: tbd:Tbd_2300 phosphonate-binding periplasmic protein; phosphonate ABC transporter periplasmic phosphonate-binding protein 2658979 5747971 Daci_2408 Delftia acidovorans SPH-1 phosphonate ABC transporter periplasmic phosphonate-binding protein YP_001563431.1 2657942 D 398578 CDS YP_001563432.1 160897850 5747972 2658976..2659854 1 NC_010002.1 KEGG: tbd:Tbd_2299 ABC phosphate/phosphonate transport system ATPase; TIGRFAM: phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; phosphonate ABC transporter ATPase 2659854 5747972 Daci_2409 Delftia acidovorans SPH-1 phosphonate ABC transporter ATPase YP_001563432.1 2658976 D 398578 CDS YP_001563433.1 160897851 5747973 complement(2659722..2660735) 1 NC_010002.1 KEGG: bpm:BURPS1710b_A1869 hypothetical protein; hypothetical protein 2660735 5747973 Daci_2410 Delftia acidovorans SPH-1 hypothetical protein YP_001563433.1 2659722 R 398578 CDS YP_001563434.1 160897852 5747974 2660747..2661835 1 NC_010002.1 TIGRFAM: phosphonate metabolism-associated iron-containing alcohol dehydrogenase; PFAM: iron-containing alcohol dehydrogenase; KEGG: reh:H16_B0831 alcohol dehydrogenase, class IV; phosphonate metabolism-associated iron-containing alcohol dehydrogenase 2661835 5747974 Daci_2411 Delftia acidovorans SPH-1 phosphonate metabolism-associated iron-containing alcohol dehydrogenase YP_001563434.1 2660747 D 398578 CDS YP_001563435.1 160897853 5747975 2661890..2662735 1 NC_010002.1 catalyzes the degradation of phosphonoacetaldehyde to acetaldehyde and phosphate; phosphonoacetaldehyde hydrolase 2662735 5747975 Daci_2412 Delftia acidovorans SPH-1 phosphonoacetaldehyde hydrolase YP_001563435.1 2661890 D 398578 CDS YP_001563436.1 160897854 5747976 complement(2662863..2663735) 1 NC_010002.1 KEGG: ajs:Ajs_2801 carboxylesterase; TIGRFAM: S-formylglutathione hydrolase; PFAM: putative esterase; S-formylglutathione hydrolase 2663735 5747976 Daci_2413 Delftia acidovorans SPH-1 S-formylglutathione hydrolase YP_001563436.1 2662863 R 398578 CDS YP_001563437.1 160897855 5747977 complement(2663984..2665093) 1 NC_010002.1 TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ajs:Ajs_2800 alcohol dehydrogenase, zinc-binding domain protein; S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2665093 5747977 Daci_2414 Delftia acidovorans SPH-1 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase YP_001563437.1 2663984 R 398578 CDS YP_001563438.1 160897856 5747978 2665332..2666369 1 NC_010002.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: aav:Aave_2196 transcriptional regulator, AraC family; AraC family transcriptional regulator 2666369 5747978 Daci_2415 Delftia acidovorans SPH-1 AraC family transcriptional regulator YP_001563438.1 2665332 D 398578 CDS YP_001563439.1 160897857 5747979 complement(2666381..2667697) 1 NC_010002.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: aav:Aave_1567 DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase 2667697 5747979 Daci_2416 Delftia acidovorans SPH-1 DEAD/DEAH box helicase YP_001563439.1 2666381 R 398578 CDS YP_001563440.1 160897858 5747980 complement(2667819..2669258) 1 NC_010002.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bxe:Bxe_B2011 RND efflux system, outer membrane lipoprotein, NodT family; RND efflux system outer membrane lipoprotein 2669258 5747980 Daci_2417 Delftia acidovorans SPH-1 RND efflux system outer membrane lipoprotein YP_001563440.1 2667819 R 398578 CDS YP_001563441.1 160897859 5747981 complement(2669255..2672554) 1 NC_010002.1 PFAM: acriflavin resistance protein; KEGG: bxe:Bxe_B2010 cation/multidrug efflux pump, AcrB/AcrD/AcrF family, RND superfamily; acriflavin resistance protein 2672554 5747981 Daci_2418 Delftia acidovorans SPH-1 acriflavin resistance protein YP_001563441.1 2669255 R 398578 CDS YP_001563442.1 160897860 5747982 complement(2672551..2675712) 1 NC_010002.1 PFAM: acriflavin resistance protein; KEGG: bxe:Bxe_B2009 cation/multidrug efflux pump, AcrB/AcrD/AcrF family, RND superfamily; acriflavin resistance protein 2675712 5747982 Daci_2419 Delftia acidovorans SPH-1 acriflavin resistance protein YP_001563442.1 2672551 R 398578 CDS YP_001563443.1 160897861 5747983 complement(2675764..2677029) 1 NC_010002.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bxe:Bxe_B2008 RND efflux pump, membrane fusion protein, CzcB subfamily; RND family efflux transporter MFP subunit 2677029 5747983 Daci_2420 Delftia acidovorans SPH-1 RND family efflux transporter MFP subunit YP_001563443.1 2675764 R 398578 CDS YP_001563444.1 160897862 5747984 complement(2677083..2677379) 1 NC_010002.1 KEGG: aav:Aave_4248 N-acetylmuramoyl-L-alanine amidase, family 2; hypothetical protein 2677379 5747984 Daci_2421 Delftia acidovorans SPH-1 hypothetical protein YP_001563444.1 2677083 R 398578 CDS YP_001563445.1 160897863 5747985 complement(2677584..2678894) 1 NC_010002.1 type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; type II citrate synthase 2678894 gltA 5747985 gltA Delftia acidovorans SPH-1 type II citrate synthase YP_001563445.1 2677584 R 398578 CDS YP_001563446.1 160897864 5747986 complement(2678920..2679219) 1 NC_010002.1 KEGG: aav:Aave_2200 protein of unknown function DUF339; hypothetical protein 2679219 5747986 Daci_2423 Delftia acidovorans SPH-1 hypothetical protein YP_001563446.1 2678920 R 398578 CDS YP_001563447.1 160897865 5747987 complement(2679219..2679923) 1 NC_010002.1 KEGG: ajs:Ajs_2796 succinate dehydrogenase and fumarate reductase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin; succinate dehydrogenase and fumarate reductase iron-sulfur protein 2679923 5747987 Daci_2424 Delftia acidovorans SPH-1 succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_001563447.1 2679219 R 398578 CDS YP_001563448.1 160897866 5747988 complement(2679951..2681756) 1 NC_010002.1 KEGG: ajs:Ajs_2795 succinate dehydrogenase, flavoprotein subunit; TIGRFAM: succinate dehydrogenase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; succinate dehydrogenase, flavoprotein subunit 2681756 5747988 Daci_2425 Delftia acidovorans SPH-1 succinate dehydrogenase, flavoprotein subunit YP_001563448.1 2679951 R 398578 CDS YP_001563449.1 160897867 5747989 complement(2681790..2682155) 1 NC_010002.1 TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; KEGG: ajs:Ajs_2794 succinate dehydrogenase, cytochrome b subunit; succinate dehydrogenase, hydrophobic membrane anchor protein 2682155 5747989 Daci_2426 Delftia acidovorans SPH-1 succinate dehydrogenase, hydrophobic membrane anchor protein YP_001563449.1 2681790 R 398578 CDS YP_001563450.1 160897868 5747990 complement(2682192..2682614) 1 NC_010002.1 TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: ajs:Ajs_2793 succinate dehydrogenase, cytochrome b subunit; succinate dehydrogenase, cytochrome b556 subunit 2682614 5747990 Daci_2427 Delftia acidovorans SPH-1 succinate dehydrogenase, cytochrome b556 subunit YP_001563450.1 2682192 R 398578 CDS YP_001563451.1 160897869 5747991 complement(2682749..2683537) 1 NC_010002.1 PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: aav:Aave_2205 transcriptional regulator, GntR family; GntR family transcriptional regulator 2683537 5747991 Daci_2428 Delftia acidovorans SPH-1 GntR family transcriptional regulator YP_001563451.1 2682749 R 398578 CDS YP_001563452.1 160897870 5747992 2683756..2684742 1 NC_010002.1 catalyzes the oxidation of malate to oxaloacetate; malate dehydrogenase 2684742 5747992 Daci_2429 Delftia acidovorans SPH-1 malate dehydrogenase YP_001563452.1 2683756 D 398578 CDS YP_001563453.1 160897871 5747993 2684757..2685563 1 NC_010002.1 catalyzes the formation of (E)-3-(methoxycarbonyl)pent-2-enedioate and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and trans-aconitate; trans-aconitate 2-methyltransferase 2685563 5747993 Daci_2430 Delftia acidovorans SPH-1 trans-aconitate 2-methyltransferase YP_001563453.1 2684757 D 398578 CDS YP_001563454.1 160897872 5747994 2685560..2686579 1 NC_010002.1 PFAM: HpcH/HpaI aldolase; KEGG: aav:Aave_2208 HpcH/HpaI aldolase; HpcH/HpaI aldolase 2686579 5747994 Daci_2431 Delftia acidovorans SPH-1 HpcH/HpaI aldolase YP_001563454.1 2685560 D 398578 CDS YP_001563455.1 160897873 5747995 2686611..2687201 1 NC_010002.1 KEGG: ajs:Ajs_2788 hypothetical protein; hypothetical protein 2687201 5747995 Daci_2432 Delftia acidovorans SPH-1 hypothetical protein YP_001563455.1 2686611 D 398578 CDS YP_001563456.1 160897874 5747996 2687265..2689856 1 NC_010002.1 catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 2689856 5747996 Daci_2433 Delftia acidovorans SPH-1 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase YP_001563456.1 2687265 D 398578 CDS YP_001563457.1 160897875 5747997 2690004..2690255 1 NC_010002.1 KEGG: xfa:XF2031 plasmid stabilization protein; plasmid stabilization protein 2690255 5747997 Daci_2434 Delftia acidovorans SPH-1 plasmid stabilization protein YP_001563457.1 2690004 D 398578 CDS YP_001563458.1 160897876 5747998 2690252..2690542 1 NC_010002.1 PFAM: plasmid stabilization system; KEGG: xfa:XF2032 plasmid stabilization protein; plasmid stabilization system protein 2690542 5747998 Daci_2435 Delftia acidovorans SPH-1 plasmid stabilization system protein YP_001563458.1 2690252 D 398578 CDS YP_001563459.1 160897877 5747999 complement(2690557..2690760) 1 NC_010002.1 hypothetical protein 2690760 5747999 Daci_2436 Delftia acidovorans SPH-1 hypothetical protein YP_001563459.1 2690557 R 398578 CDS YP_001563460.1 160897878 5748000 complement(2690757..2691281) 1 NC_010002.1 KEGG: eba:ebA2161 hypothetical protein; hypothetical protein 2691281 5748000 Daci_2437 Delftia acidovorans SPH-1 hypothetical protein YP_001563460.1 2690757 R 398578 CDS YP_001563461.1 160897879 5748001 complement(2691325..2692245) 1 NC_010002.1 PFAM: helix-turn-helix domain protein; KEGG: aav:Aave_2212 transcriptional regulator, XRE family; XRE family transcriptional regulator 2692245 5748001 Daci_2438 Delftia acidovorans SPH-1 XRE family transcriptional regulator YP_001563461.1 2691325 R 398578 CDS YP_001563462.1 160897880 5748002 2692287..2692712 1 NC_010002.1 KEGG: aav:Aave_2213 hypothetical protein; hypothetical protein 2692712 5748002 Daci_2439 Delftia acidovorans SPH-1 hypothetical protein YP_001563462.1 2692287 D 398578 CDS YP_001563463.1 160897881 5748003 complement(2693054..2693326) 1 NC_010002.1 hypothetical protein 2693326 5748003 Daci_2440 Delftia acidovorans SPH-1 hypothetical protein YP_001563463.1 2693054 R 398578 CDS YP_001563464.1 160897882 5748004 2693864..2696749 1 NC_010002.1 Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 2696749 5748004 Daci_2441 Delftia acidovorans SPH-1 aconitate hydratase YP_001563464.1 2693864 D 398578 CDS YP_001563465.1 160897883 5748005 complement(2696892..2697791) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_1842 transcriptional regulator, LysR family; LysR family transcriptional regulator 2697791 5748005 Daci_2442 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001563465.1 2696892 R 398578 CDS YP_001563466.1 160897884 5748006 2697928..2699631 1 NC_010002.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: vei:Veis_1884 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 2699631 5748006 Daci_2443 Delftia acidovorans SPH-1 acyl-CoA dehydrogenase domain-containing protein YP_001563466.1 2697928 D 398578 CDS YP_001563467.1 160897885 5748007 2699707..2700711 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: aav:Aave_1840 uncharacterized protein UPF0065; hypothetical protein 2700711 5748007 Daci_2444 Delftia acidovorans SPH-1 hypothetical protein YP_001563467.1 2699707 D 398578 CDS YP_001563468.1 160897886 5748008 2700869..2701984 1 NC_010002.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: reh:H16_B0089 predicted acyl-CoA transferase/carnitine dehydratase; L-carnitine dehydratase/bile acid-inducible protein F 2701984 5748008 Daci_2445 Delftia acidovorans SPH-1 L-carnitine dehydratase/bile acid-inducible protein F YP_001563468.1 2700869 D 398578 CDS YP_001563469.1 160897887 5748009 complement(2701992..2703647) 1 NC_010002.1 KEGG: azo:azo0658 hypothetical membrane protein; hypothetical protein 2703647 5748009 Daci_2446 Delftia acidovorans SPH-1 hypothetical protein YP_001563469.1 2701992 R 398578 CDS YP_001563470.1 160897888 5748010 complement(2703644..2704699) 1 NC_010002.1 KEGG: azo:azo0657 hypothetical protein; hypothetical protein 2704699 5748010 Daci_2447 Delftia acidovorans SPH-1 hypothetical protein YP_001563470.1 2703644 R 398578 CDS YP_001563471.1 160897889 5748011 2704875..2705408 1 NC_010002.1 KEGG: aba:Acid345_0330 hypothetical protein; hypothetical protein 2705408 5748011 Daci_2448 Delftia acidovorans SPH-1 hypothetical protein YP_001563471.1 2704875 D 398578 CDS YP_001563472.1 160897890 5748012 2705545..2707014 1 NC_010002.1 TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: aav:Aave_1527 4Fe-4S ferredoxin, iron-sulfur binding domain protein; cytochrome c oxidase accessory protein CcoG 2707014 5748012 Daci_2449 Delftia acidovorans SPH-1 cytochrome c oxidase accessory protein CcoG YP_001563472.1 2705545 D 398578 CDS YP_001563473.1 160897891 5748013 2707160..2709136 1 NC_010002.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 2709136 5748013 Daci_2450 Delftia acidovorans SPH-1 dihydroxy-acid dehydratase YP_001563473.1 2707160 D 398578 CDS YP_001563474.1 160897892 5748014 2709217..2710209 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: pol:Bpro_0198 twin-arginine translocation pathway signal; hypothetical protein 2710209 5748014 Daci_2451 Delftia acidovorans SPH-1 hypothetical protein YP_001563474.1 2709217 D 398578 CDS YP_001563475.1 160897893 5748015 complement(2710348..2711535) 1 NC_010002.1 PFAM: Integrase catalytic region; KEGG: ppf:Pput_3520 integrase, catalytic region; integrase catalytic subunit 2711535 5748015 Daci_2452 Delftia acidovorans SPH-1 integrase catalytic subunit YP_001563475.1 2710348 R 398578 CDS YP_001563476.1 160897894 5748016 complement(2711761..2713923) 1 NC_010002.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: reh:H16_B2570 outer membrane receptor for Fe(III)-dicitrate; TonB-dependent siderophore receptor 2713923 5748016 Daci_2453 Delftia acidovorans SPH-1 TonB-dependent siderophore receptor YP_001563476.1 2711761 R 398578 CDS YP_001563477.1 160897895 5748017 complement(2714173..2715618) 1 NC_010002.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: reu:Reut_B3939 regulatory protein GntR, HTH:aminotransferase, class I and II; transcriptional regulator 2715618 5748017 Daci_2454 Delftia acidovorans SPH-1 transcriptional regulator YP_001563477.1 2714173 R 398578 CDS YP_001563478.1 160897896 5748018 complement(2715651..2716520) 1 NC_010002.1 KEGG: ajs:Ajs_2784 hypothetical protein; hypothetical protein 2716520 5748018 Daci_2455 Delftia acidovorans SPH-1 hypothetical protein YP_001563478.1 2715651 R 398578 CDS YP_001563479.1 160897897 5748019 complement(2716643..2718031) 1 NC_010002.1 PFAM: peptidase U32; KEGG: ajs:Ajs_2783 peptidase U32; peptidase U32 2718031 5748019 Daci_2456 Delftia acidovorans SPH-1 peptidase U32 YP_001563479.1 2716643 R 398578 CDS YP_001563480.1 160897898 5748020 complement(2718053..2718964) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_2215 transcriptional regulator, LysR family; LysR family transcriptional regulator 2718964 5748020 Daci_2457 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001563480.1 2718053 R 398578 CDS YP_001563481.1 160897899 5748021 2719109..2719879 1 NC_010002.1 PFAM: protein of unknown function DUF81; KEGG: bbr:BB1250 putative membrane protein; hypothetical protein 2719879 5748021 Daci_2458 Delftia acidovorans SPH-1 hypothetical protein YP_001563481.1 2719109 D 398578 CDS YP_001563482.1 160897900 5748022 complement(2719890..2720489) 1 NC_010002.1 TIGRFAM: peptide chain release factor H; PFAM: Class I peptide chain release factor; KEGG: bur:Bcep18194_A4861 class I peptide chain release factor; peptide chain release factor H 2720489 5748022 Daci_2459 Delftia acidovorans SPH-1 peptide chain release factor H YP_001563482.1 2719890 R 398578 CDS YP_001563483.1 160897901 5748023 complement(2720480..2721634) 1 NC_010002.1 TIGRFAM: release factor H-coupled RctB family protein; PFAM: protein of unknown function UPF0027; KEGG: pfl:PFL_2087 RtcB protein; release factor H-coupled RctB family protein 2721634 5748023 Daci_2460 Delftia acidovorans SPH-1 release factor H-coupled RctB family protein YP_001563483.1 2720480 R 398578 CDS YP_001563484.1 160897902 5748024 complement(2722032..2723174) 1 NC_010002.1 TIGRFAM: TonB family protein; protein TolA; PFAM: Tol-Pal system TolA; KEGG: aav:Aave_2225 TonB family protein; protein TolA 2723174 5748024 Daci_2461 Delftia acidovorans SPH-1 protein TolA YP_001563484.1 2722032 R 398578 CDS YP_001563485.1 160897903 5748025 complement(2723199..2723624) 1 NC_010002.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: ajs:Ajs_2772 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 2723624 5748025 Daci_2462 Delftia acidovorans SPH-1 biopolymer transport protein ExbD/TolR YP_001563485.1 2723199 R 398578 CDS YP_001563486.1 160897904 5748026 complement(2723655..2724359) 1 NC_010002.1 TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: ajs:Ajs_2771 MotA/TolQ/ExbB proton channel; protein TolQ 2724359 5748026 Daci_2463 Delftia acidovorans SPH-1 protein TolQ YP_001563486.1 2723655 R 398578 CDS YP_001563487.1 160897905 5748027 complement(2724356..2724772) 1 NC_010002.1 TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: ajs:Ajs_2770 4-hydroxybenzoyl-CoA thioesterase; tol-pal system-associated acyl-CoA thioesterase 2724772 5748027 Daci_2464 Delftia acidovorans SPH-1 tol-pal system-associated acyl-CoA thioesterase YP_001563487.1 2724356 R 398578 CDS YP_001563488.1 160897906 5748028 complement(2724785..2725969) 1 NC_010002.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aminotransferase class I and II; KEGG: ajs:Ajs_2769 aminotransferase, class I and II; aminotransferase 2725969 5748028 Daci_2465 Delftia acidovorans SPH-1 aminotransferase YP_001563488.1 2724785 R 398578 CDS YP_001563489.1 160897907 5748029 complement(2726074..2726712) 1 NC_010002.1 TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: aav:Aave_2230 NusB antitermination factor; NusB antitermination factor 2726712 5748029 Daci_2466 Delftia acidovorans SPH-1 NusB antitermination factor YP_001563489.1 2726074 R 398578 CDS YP_001563490.1 160897908 5748030 complement(2726709..2727179) 1 NC_010002.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 2727179 ribH 5748030 ribH Delftia acidovorans SPH-1 6,7-dimethyl-8-ribityllumazine synthase YP_001563490.1 2726709 R 398578 CDS YP_001563491.1 160897909 5748031 complement(2727183..2728352) 1 NC_010002.1 TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: aav:Aave_2232 3,4-dihydroxy-2-butanone 4-phosphate synthase; 3,4-dihydroxy-2-butanone 4-phosphate synthase 2728352 5748031 Daci_2468 Delftia acidovorans SPH-1 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_001563491.1 2727183 R 398578 CDS YP_001563492.1 160897910 5748032 complement(2728517..2728870) 1 NC_010002.1 PFAM: ferredoxin; KEGG: ajs:Ajs_2765 ferredoxin; ferredoxin 2728870 5748032 Daci_2469 Delftia acidovorans SPH-1 ferredoxin YP_001563492.1 2728517 R 398578 CDS YP_001563493.1 160897911 5748033 2729468..2730376 1 NC_010002.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ajs:Ajs_2522 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2730376 5748033 Daci_2470 Delftia acidovorans SPH-1 short-chain dehydrogenase/reductase SDR YP_001563493.1 2729468 D 398578 CDS YP_001563494.1 160897912 5748034 2730647..2732176 1 NC_010002.1 TIGRFAM: glutamate--cysteine ligase; KEGG: ajs:Ajs_2521 glutamate--cysteine ligase; glutamate--cysteine ligase 2732176 5748034 Daci_2471 Delftia acidovorans SPH-1 glutamate--cysteine ligase YP_001563494.1 2730647 D 398578 CDS YP_001563495.1 160897913 5748035 complement(2732184..2732396) 1 NC_010002.1 KEGG: ajs:Ajs_2512 hypothetical protein; hypothetical protein 2732396 5748035 Daci_2472 Delftia acidovorans SPH-1 hypothetical protein YP_001563495.1 2732184 R 398578 CDS YP_001563496.1 160897914 5748036 complement(2732399..2732641) 1 NC_010002.1 KEGG: pna:Pnap_1311 hypothetical protein; hypothetical protein 2732641 5748036 Daci_2473 Delftia acidovorans SPH-1 hypothetical protein YP_001563496.1 2732399 R 398578 CDS YP_001563497.1 160897915 5748037 2732809..2733762 1 NC_010002.1 PFAM: GTP-binding protein HSR1-related; KEGG: aav:Aave_2270 GTP-binding protein; GTP-binding protein HSR1-like 2733762 5748037 Daci_2474 Delftia acidovorans SPH-1 GTP-binding protein HSR1-like YP_001563497.1 2732809 D 398578 CDS YP_001563498.1 160897916 5748038 2733899..2736190 1 NC_010002.1 KEGG: rfr:Rfer_2055 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 2736190 5748038 Daci_2475 Delftia acidovorans SPH-1 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_001563498.1 2733899 D 398578 CDS YP_001563499.1 160897917 5748039 complement(2736222..2737418) 1 NC_010002.1 KEGG: azo:azo1605 probable hippurate hydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 2737418 5748039 Daci_2476 Delftia acidovorans SPH-1 amidohydrolase YP_001563499.1 2736222 R 398578 CDS YP_001563500.1 160897918 5748040 2737633..2738655 1 NC_010002.1 KEGG: pna:Pnap_1325 phosphoesterase, DHHA1; phosphoesterase DHHA1 2738655 5748040 Daci_2477 Delftia acidovorans SPH-1 phosphoesterase DHHA1 YP_001563500.1 2737633 D 398578 CDS YP_001563501.1 160897919 5748041 complement(2738595..2739554) 1 NC_010002.1 PFAM: pseudouridine synthase; KEGG: aav:Aave_2278 pseudouridine synthase; pseudouridine synthase 2739554 5748041 Daci_2478 Delftia acidovorans SPH-1 pseudouridine synthase YP_001563501.1 2738595 R 398578 CDS YP_001563502.1 160897920 5748042 2739659..2740657 1 NC_010002.1 KEGG: ajs:Ajs_2757 diaminopimelate dehydrogenase; TIGRFAM: diaminopimelate dehydrogenase; PFAM: dihydrodipicolinate reductase; homoserine dehydrogenase NAD-binding; diaminopimelate dehydrogenase 2740657 5748042 Daci_2479 Delftia acidovorans SPH-1 diaminopimelate dehydrogenase YP_001563502.1 2739659 D 398578 CDS YP_001563503.1 160897921 5748043 complement(2740659..2742032) 1 NC_010002.1 PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: aav:Aave_2285 major facilitator superfamily MFS_1; major facilitator transporter 2742032 5748043 Daci_2480 Delftia acidovorans SPH-1 major facilitator transporter YP_001563503.1 2740659 R 398578 CDS YP_001563504.1 160897922 5748044 2742123..2742470 1 NC_010002.1 hypothetical protein 2742470 5748044 Daci_2481 Delftia acidovorans SPH-1 hypothetical protein YP_001563504.1 2742123 D 398578 CDS YP_001563505.1 160897923 5748045 2742836..2744284 1 NC_010002.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: rde:RD1_3832 cardiolipin synthase; phospholipase D/transphosphatidylase 2744284 5748045 Daci_2482 Delftia acidovorans SPH-1 phospholipase D/transphosphatidylase YP_001563505.1 2742836 D 398578 CDS YP_001563506.1 160897924 5748046 complement(2744346..2745188) 1 NC_010002.1 PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: pen:PSEEN3175 hypothetical protein; hypothetical protein 2745188 5748046 Daci_2483 Delftia acidovorans SPH-1 hypothetical protein YP_001563506.1 2744346 R 398578 CDS YP_001563507.1 160897925 5748047 2745521..2746099 1 NC_010002.1 KEGG: pol:Bpro_3373 putative lipoprotein; putative lipoprotein 2746099 5748047 Daci_2484 Delftia acidovorans SPH-1 putative lipoprotein YP_001563507.1 2745521 D 398578 CDS YP_001563508.1 160897926 5748048 complement(2746122..2747072) 1 NC_010002.1 PFAM: peptidase M23B; KEGG: ajs:Ajs_2496 peptidase M23B; peptidase M23B 2747072 5748048 Daci_2485 Delftia acidovorans SPH-1 peptidase M23B YP_001563508.1 2746122 R 398578 CDS YP_001563509.1 160897927 5748049 complement(2747099..2749366) 1 NC_010002.1 KEGG: aav:Aave_1201 hypothetical protein; hypothetical protein 2749366 5748049 Daci_2486 Delftia acidovorans SPH-1 hypothetical protein YP_001563509.1 2747099 R 398578 CDS YP_001563510.1 160897928 5748050 complement(2749528..2749857) 1 NC_010002.1 KEGG: aav:Aave_2295 hypothetical protein; hypothetical protein 2749857 5748050 Daci_2487 Delftia acidovorans SPH-1 hypothetical protein YP_001563510.1 2749528 R 398578 CDS YP_001563511.1 160897929 5748051 complement(2749937..2750653) 1 NC_010002.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bvi:Bcep1808_4224 methyltransferase type 11; type 12 methyltransferase 2750653 5748051 Daci_2488 Delftia acidovorans SPH-1 type 12 methyltransferase YP_001563511.1 2749937 R 398578 CDS YP_001563512.1 160897930 5748052 complement(2750783..2752669) 1 NC_010002.1 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 2752669 5748052 Daci_2489 Delftia acidovorans SPH-1 glutaminyl-tRNA synthetase YP_001563512.1 2750783 R 398578 CDS YP_001563513.1 160897931 5748053 2752822..2753187 1 NC_010002.1 KEGG: ajs:Ajs_1609 hypothetical protein; hypothetical protein 2753187 5748053 Daci_2490 Delftia acidovorans SPH-1 hypothetical protein YP_001563513.1 2752822 D 398578 CDS YP_001563514.1 160897932 5748054 2753318..2753761 1 NC_010002.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 2753761 5748054 Daci_2491 Delftia acidovorans SPH-1 3-dehydroquinate dehydratase YP_001563514.1 2753318 D 398578 CDS YP_001563515.1 160897933 5748055 2753755..2754642 1 NC_010002.1 PFAM: alpha/beta hydrolase fold; KEGG: aav:Aave_2303 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 2754642 5748055 Daci_2492 Delftia acidovorans SPH-1 alpha/beta hydrolase fold protein YP_001563515.1 2753755 D 398578 CDS YP_001563516.1 160897934 5748056 2754647..2755045 1 NC_010002.1 PFAM: Class I peptide chain release factor; KEGG: ajs:Ajs_1612 class I peptide chain release factor; class I peptide chain release factor 2755045 5748056 Daci_2493 Delftia acidovorans SPH-1 class I peptide chain release factor YP_001563516.1 2754647 D 398578 CDS YP_001563517.1 160897935 5748057 2755128..2756066 1 NC_010002.1 PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: ajs:Ajs_1613 extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; extradiol ring-cleavage dioxygenase class III protein subunit B 2756066 5748057 Daci_2494 Delftia acidovorans SPH-1 extradiol ring-cleavage dioxygenase class III protein subunit B YP_001563517.1 2755128 D 398578 CDS YP_001563518.1 160897936 5748058 2756162..2756827 1 NC_010002.1 PFAM: phospholipase/Carboxylesterase; KEGG: ajs:Ajs_1614 phospholipase/carboxylesterase; phospholipase/carboxylesterase 2756827 5748058 Daci_2495 Delftia acidovorans SPH-1 phospholipase/carboxylesterase YP_001563518.1 2756162 D 398578 CDS YP_001563519.1 160897937 5748059 2757019..2757939 1 NC_010002.1 KEGG: ajs:Ajs_1615 hypothetical protein; hypothetical protein 2757939 5748059 Daci_2496 Delftia acidovorans SPH-1 hypothetical protein YP_001563519.1 2757019 D 398578 CDS YP_001563520.1 160897938 5748060 complement(2757953..2758423) 1 NC_010002.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: aav:Aave_2309 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 2758423 5748060 Daci_2497 Delftia acidovorans SPH-1 AsnC family transcriptional regulator YP_001563520.1 2757953 R 398578 CDS YP_001563521.1 160897939 5748061 2758450..2761158 1 NC_010002.1 paralogs to the E1 component of pyruvate dehydrogenase subunit E1; 2-oxoacid dehydrogenase subunit E1 2761158 5748061 Daci_2498 Delftia acidovorans SPH-1 2-oxoacid dehydrogenase subunit E1 YP_001563521.1 2758450 D 398578 CDS YP_001563522.1 160897940 5748062 2761494..2763674 1 NC_010002.1 PFAM: cytochrome c class I; KEGG: rme:Rmet_2155 cytochrome c, class I; gluconate 2-dehydrogenase 2763674 5748062 Daci_2499 Delftia acidovorans SPH-1 gluconate 2-dehydrogenase YP_001563522.1 2761494 D 398578 CDS YP_001563523.1 160897941 5748063 complement(2763917..2764672) 1 NC_010002.1 PFAM: protein of unknown function DUF81; KEGG: pen:PSEEN2125 hypothetical protein; hypothetical protein 2764672 5748063 Daci_2500 Delftia acidovorans SPH-1 hypothetical protein YP_001563523.1 2763917 R 398578 CDS YP_001563524.1 160897942 5748064 2764799..2765767 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bch:Bcen2424_3495 transcriptional regulator, LysR family; LysR family transcriptional regulator 2765767 5748064 Daci_2501 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001563524.1 2764799 D 398578 CDS YP_001563525.1 160897943 5748065 complement(2765758..2766627) 1 NC_010002.1 PFAM: protein of unknown function DUF980; KEGG: aav:Aave_2314 protein of unknown function DUF980; hypothetical protein 2766627 5748065 Daci_2502 Delftia acidovorans SPH-1 hypothetical protein YP_001563525.1 2765758 R 398578 CDS YP_001563526.1 160897944 5748066 complement(2766624..2767472) 1 NC_010002.1 TIGRFAM: UDP-2,3-diacylglucosamine hydrolase; PFAM: metallophosphoesterase; KEGG: ajs:Ajs_1619 UDP-2,3-diacylglucosamine hydrolase; UDP-2,3-diacylglucosamine hydrolase 2767472 5748066 Daci_2503 Delftia acidovorans SPH-1 UDP-2,3-diacylglucosamine hydrolase YP_001563526.1 2766624 R 398578 CDS YP_001563527.1 160897945 5748067 complement(2767637..2768143) 1 NC_010002.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: aav:Aave_2316 peptidylprolyl isomerase; cyclophilin type peptidyl-prolyl cis-trans isomerase 2768143 5748067 Daci_2504 Delftia acidovorans SPH-1 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_001563527.1 2767637 R 398578 CDS YP_001563528.1 160897946 5748068 complement(2768201..2768869) 1 NC_010002.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: ajs:Ajs_1621 peptidylprolyl isomerase; cyclophilin type peptidyl-prolyl cis-trans isomerase 2768869 5748068 Daci_2505 Delftia acidovorans SPH-1 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_001563528.1 2768201 R 398578 CDS YP_001563529.1 160897947 5748069 complement(2768932..2769591) 1 NC_010002.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: aav:Aave_2319 tetratricopeptide TPR_2 repeat protein; hypothetical protein 2769591 5748069 Daci_2506 Delftia acidovorans SPH-1 hypothetical protein YP_001563529.1 2768932 R 398578 CDS YP_001563530.1 160897948 5748070 2769670..2771055 1 NC_010002.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 2771055 cysS 5748070 cysS Delftia acidovorans SPH-1 cysteinyl-tRNA synthetase YP_001563530.1 2769670 D 398578 CDS YP_001563531.1 160897949 5748071 2771105..2771914 1 NC_010002.1 PFAM: HhH-GPD family protein; KEGG: vei:Veis_4937 HhH-GPD family protein; HhH-GPD family protein 2771914 5748071 Daci_2508 Delftia acidovorans SPH-1 HhH-GPD family protein YP_001563531.1 2771105 D 398578 CDS YP_001563532.1 160897950 5748072 2771998..2772975 1 NC_010002.1 KEGG: ajs:Ajs_1625 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: acetyl-CoA carboxylase alpha subunit; acetyl-CoA carboxylase, carboxyl transferase subunit alpha 2772975 5748072 Daci_2509 Delftia acidovorans SPH-1 acetyl-CoA carboxylase, carboxyl transferase subunit alpha YP_001563532.1 2771998 D 398578 CDS YP_001563533.1 160897951 5748073 2773162..2774121 1 NC_010002.1 TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; KEGG: ajs:Ajs_1627 tRNA(Ile)-lysidine synthetase; tRNA(Ile)-lysidine synthetase 2774121 5748073 Daci_2510 Delftia acidovorans SPH-1 tRNA(Ile)-lysidine synthetase YP_001563533.1 2773162 D 398578 CDS YP_001563534.1 160897952 5748074 2774300..2775565 1 NC_010002.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 2775565 5748074 Daci_2511 Delftia acidovorans SPH-1 aspartate kinase YP_001563534.1 2774300 D 398578 CDS YP_001563535.1 160897953 5748081 2781601..2782350 1 NC_010002.1 PFAM: pseudouridine synthase; KEGG: ajs:Ajs_1183 pseudouridine synthase; pseudouridine synthase 2782350 5748081 Daci_2512 Delftia acidovorans SPH-1 pseudouridine synthase YP_001563535.1 2781601 D 398578 CDS YP_001563536.1 160897954 5748082 2782370..2783797 1 NC_010002.1 KEGG: tcr:507951.150 guanine deaminase; TIGRFAM: guanine deaminase; PFAM: amidohydrolase; guanine deaminase 2783797 5748082 Daci_2513 Delftia acidovorans SPH-1 guanine deaminase YP_001563536.1 2782370 D 398578 CDS YP_001563537.1 160897955 5748083 2783845..2785218 1 NC_010002.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: lbr:LVIS_1044 xanthine/uracil permease; xanthine/uracil/vitamin C permease 2785218 5748083 Daci_2514 Delftia acidovorans SPH-1 xanthine/uracil/vitamin C permease YP_001563537.1 2783845 D 398578 CDS YP_001563538.1 160897956 5748084 complement(2785325..2785774) 1 NC_010002.1 PFAM: RNA-binding S4 domain protein; KEGG: aav:Aave_2419 RNA-binding S4 domain protein; RNA-binding S4 domain-containing protein 2785774 5748084 Daci_2515 Delftia acidovorans SPH-1 RNA-binding S4 domain-containing protein YP_001563538.1 2785325 R 398578 CDS YP_001563539.1 160897957 5748085 complement(2785779..2787266) 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; KEGG: ajs:Ajs_1640 integral membrane sensor signal transduction histidine kinase; histidine kinase 2787266 5748085 Daci_2516 Delftia acidovorans SPH-1 histidine kinase YP_001563539.1 2785779 R 398578 CDS YP_001563540.1 160897958 5748086 complement(2787297..2788019) 1 NC_010002.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: aav:Aave_3012 two component transcriptional regulator, winged helix family; two component transcriptional regulator 2788019 5748086 Daci_2517 Delftia acidovorans SPH-1 two component transcriptional regulator YP_001563540.1 2787297 R 398578 CDS YP_001563541.1 160897959 5748087 2788120..2789079 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_1642 uncharacterized protein UPF0065; hypothetical protein 2789079 5748087 Daci_2518 Delftia acidovorans SPH-1 hypothetical protein YP_001563541.1 2788120 D 398578 CDS YP_001563542.1 160897960 5748088 2789296..2789865 1 NC_010002.1 KEGG: aav:Aave_3010 hypothetical protein; hypothetical protein 2789865 5748088 Daci_2519 Delftia acidovorans SPH-1 hypothetical protein YP_001563542.1 2789296 D 398578 CDS YP_001563543.1 160897961 5748089 2789865..2791379 1 NC_010002.1 PFAM: protein of unknown function DUF112 transmembrane; KEGG: ajs:Ajs_1644 protein of unknown function DUF112, transmembrane; hypothetical protein 2791379 5748089 Daci_2520 Delftia acidovorans SPH-1 hypothetical protein YP_001563543.1 2789865 D 398578 CDS YP_001563544.1 160897962 5748090 2791897..2796426 1 NC_010002.1 TIGRFAM: YD repeat protein; PFAM: RHS protein; YD repeat-containing protein; KEGG: aav:Aave_4283 YD repeat protein; YD repeat-containing protein 2796426 5748090 Daci_2521 Delftia acidovorans SPH-1 YD repeat-containing protein YP_001563544.1 2791897 D 398578 CDS YP_001563545.1 160897963 5748091 2796462..2796797 1 NC_010002.1 KEGG: ecs:ECs0238 hypothetical protein; hypothetical protein 2796797 5748091 Daci_2522 Delftia acidovorans SPH-1 hypothetical protein YP_001563545.1 2796462 D 398578 CDS YP_001563546.1 160897964 5748092 2797215..2797640 1 NC_010002.1 KEGG: aav:Aave_3789 putative TIS1421-transposase orfA protein; putative TIS1421-transposase orfA protein 2797640 5748092 Daci_2523 Delftia acidovorans SPH-1 putative TIS1421-transposase orfA protein YP_001563546.1 2797215 D 398578 CDS YP_001563547.1 160897965 5748093 2797700..2798038 1 NC_010002.1 KEGG: aav:Aave_3790 transposase, IS4 family protein; transposase, IS4 family protein 2798038 5748093 Daci_2524 Delftia acidovorans SPH-1 transposase, IS4 family protein YP_001563547.1 2797700 D 398578 CDS YP_001563548.1 160897966 5748094 complement(2798853..2799212) 1 NC_010002.1 hypothetical protein 2799212 5748094 Daci_2525 Delftia acidovorans SPH-1 hypothetical protein YP_001563548.1 2798853 R 398578 CDS YP_001563549.1 160897967 5748095 2799300..2799674 1 NC_010002.1 hypothetical protein 2799674 5748095 Daci_2526 Delftia acidovorans SPH-1 hypothetical protein YP_001563549.1 2799300 D 398578 CDS YP_001563550.1 160897968 5748096 2800740..2800988 1 NC_010002.1 hypothetical protein 2800988 5748096 Daci_2527 Delftia acidovorans SPH-1 hypothetical protein YP_001563550.1 2800740 D 398578 CDS YP_001563551.1 160897969 5748097 2801216..2802529 1 NC_010002.1 PFAM: lipolytic protein G-D-S-L family; KEGG: pau:PA14_23690 putative secreted protein; GDSL family lipase 2802529 5748097 Daci_2528 Delftia acidovorans SPH-1 GDSL family lipase YP_001563551.1 2801216 D 398578 CDS YP_001563552.1 160897970 5748098 2802809..2803129 1 NC_010002.1 PFAM: regulatory protein ArsR; KEGG: mpt:Mpe_A2424 transcriptional regulator; ArsR family transcriptional regulator 2803129 5748098 Daci_2529 Delftia acidovorans SPH-1 ArsR family transcriptional regulator YP_001563552.1 2802809 D 398578 CDS YP_001563553.1 160897971 5748099 2803201..2804733 1 NC_010002.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bch:Bcen2424_5529 sigma54 specific transcriptional regulator, fis family; putative sigma-54 specific transcriptional regulator 2804733 5748099 Daci_2530 Delftia acidovorans SPH-1 putative sigma-54 specific transcriptional regulator YP_001563553.1 2803201 D 398578 CDS YP_001563554.1 160897972 5748100 2804842..2806020 1 NC_010002.1 KEGG: xac:XAC4279 hypothetical protein; hypothetical protein 2806020 5748100 Daci_2531 Delftia acidovorans SPH-1 hypothetical protein YP_001563554.1 2804842 D 398578 CDS YP_001563555.1 160897973 5748101 complement(2806087..2806896) 1 NC_010002.1 KEGG: bch:Bcen2424_5344 hypothetical protein; hypothetical protein 2806896 5748101 Daci_2532 Delftia acidovorans SPH-1 hypothetical protein YP_001563555.1 2806087 R 398578 CDS YP_001563556.1 160897974 5748102 complement(2806897..2808057) 1 NC_010002.1 KEGG: sus:Acid_7657 hypothetical protein; hypothetical protein 2808057 5748102 Daci_2533 Delftia acidovorans SPH-1 hypothetical protein YP_001563556.1 2806897 R 398578 CDS YP_001563557.1 160897975 5748103 complement(2808182..2808868) 1 NC_010002.1 KEGG: ajs:Ajs_2446 hypothetical protein; hypothetical protein 2808868 5748103 Daci_2534 Delftia acidovorans SPH-1 hypothetical protein YP_001563557.1 2808182 R 398578 CDS YP_001563558.1 160897976 5748104 complement(2808891..2809634) 1 NC_010002.1 KEGG: ajs:Ajs_2446 hypothetical protein; hypothetical protein 2809634 5748104 Daci_2535 Delftia acidovorans SPH-1 hypothetical protein YP_001563558.1 2808891 R 398578 CDS YP_001563559.1 160897977 5748105 complement(2809671..2810369) 1 NC_010002.1 KEGG: ajs:Ajs_2446 hypothetical protein; hypothetical protein 2810369 5748105 Daci_2536 Delftia acidovorans SPH-1 hypothetical protein YP_001563559.1 2809671 R 398578 CDS YP_001563560.1 160897978 5748106 complement(2810393..2810944) 1 NC_010002.1 KEGG: ajs:Ajs_2446 hypothetical protein; hypothetical protein 2810944 5748106 Daci_2537 Delftia acidovorans SPH-1 hypothetical protein YP_001563560.1 2810393 R 398578 CDS YP_001563561.1 160897979 5748107 complement(2811102..2811332) 1 NC_010002.1 KEGG: aav:Aave_1687 putative transcriptional regulator, XRE family; hypothetical protein 2811332 5748107 Daci_2538 Delftia acidovorans SPH-1 hypothetical protein YP_001563561.1 2811102 R 398578 CDS YP_001563562.1 160897980 5748108 2811607..2812056 1 NC_010002.1 PFAM: peptidase S24 and S26 domain protein; KEGG: bbr:BB1678 putative phage repressor; peptidase S24/S26 domain-containing protein 2812056 5748108 Daci_2539 Delftia acidovorans SPH-1 peptidase S24/S26 domain-containing protein YP_001563562.1 2811607 D 398578 CDS YP_001563563.1 160897981 5748109 2812507..2814288 1 NC_010002.1 KEGG: dar:Daro_1107 hypothetical protein; hypothetical protein 2814288 5748109 Daci_2540 Delftia acidovorans SPH-1 hypothetical protein YP_001563563.1 2812507 D 398578 CDS YP_001563564.1 160897982 5748110 2814616..2814921 1 NC_010002.1 PFAM: transposase IS3/IS911 family protein; KEGG: ecw:EcE24377A_F0075 IS2, transposase orfA; transposase IS3/IS911 family protein 2814921 5748110 Daci_2541 Delftia acidovorans SPH-1 transposase IS3/IS911 family protein YP_001563564.1 2814616 D 398578 CDS YP_001563565.1 160897983 5748111 2815068..2815250 1 NC_010002.1 KEGG: nmu:Nmul_A2405 integrase, catalytic region; integrase catalytic subunit 2815250 5748111 Daci_2542 Delftia acidovorans SPH-1 integrase catalytic subunit YP_001563565.1 2815068 D 398578 CDS YP_001563566.1 160897984 5748112 2815967..2816815 1 NC_010002.1 hypothetical protein 2816815 5748112 Daci_2543 Delftia acidovorans SPH-1 hypothetical protein YP_001563566.1 2815967 D 398578 CDS YP_001563567.1 160897985 5748113 complement(2817150..2818253) 1 NC_010002.1 PFAM: porin Gram-negative type; KEGG: vei:Veis_0301 porin, gram-negative type; porin 2818253 5748113 Daci_2544 Delftia acidovorans SPH-1 porin YP_001563567.1 2817150 R 398578 CDS YP_001563568.1 160897986 5748114 complement(2818382..2819233) 1 NC_010002.1 KEGG: aav:Aave_3268 extracellular solute-binding protein, family 1; extracellular solute-binding protein 2819233 5748114 Daci_2545 Delftia acidovorans SPH-1 extracellular solute-binding protein YP_001563568.1 2818382 R 398578 CDS YP_001563569.1 160897987 5748115 complement(2819309..2820283) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: pna:Pnap_3813 uncharacterized protein UPF0065; hypothetical protein 2820283 5748115 Daci_2546 Delftia acidovorans SPH-1 hypothetical protein YP_001563569.1 2819309 R 398578 CDS YP_001563570.1 160897988 5748116 2820365..2821297 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reu:Reut_B4412 regulatory protein, LysR:LysR, substrate-binding; LysR family transcriptional regulator 2821297 5748116 Daci_2547 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001563570.1 2820365 D 398578 CDS YP_001563571.1 160897989 5748117 2821582..2822163 1 NC_010002.1 PFAM: NADPH-dependent FMN reductase; KEGG: rme:Rmet_5075 NADPH-dependent FMN reductase; FMN reductase 2822163 5748117 Daci_2548 Delftia acidovorans SPH-1 FMN reductase YP_001563571.1 2821582 D 398578 CDS YP_001563572.1 160897990 5748118 2822207..2823190 1 NC_010002.1 PFAM: Domain of unknown function DUF1852; KEGG: aav:Aave_2780 hypothetical protein; hypothetical protein 2823190 5748118 Daci_2549 Delftia acidovorans SPH-1 hypothetical protein YP_001563572.1 2822207 D 398578 CDS YP_001563573.1 160897991 5748119 2823299..2824324 1 NC_010002.1 catalyzes the formation of tetrahydropteroyl-L-glutamate and methionine from L-homocysteine and 5-methyltetrahydropteroyltri-L-glutamate; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 2824324 5748119 Daci_2550 Delftia acidovorans SPH-1 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase YP_001563573.1 2823299 D 398578 CDS YP_001563574.1 160897992 5748120 2824615..2825817 1 NC_010002.1 PFAM: Extracellular ligand-binding receptor; KEGG: vei:Veis_0332 extracellular ligand-binding receptor; extracellular ligand-binding receptor 2825817 5748120 Daci_2551 Delftia acidovorans SPH-1 extracellular ligand-binding receptor YP_001563574.1 2824615 D 398578 CDS YP_001563575.1 160897993 5748121 2825821..2826603 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_0330 ABC transporter related; ABC transporter-like protein 2826603 5748121 Daci_2552 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001563575.1 2825821 D 398578 CDS YP_001563576.1 160897994 5748122 2826600..2827349 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_0329 ABC transporter related; ABC transporter-like protein 2827349 5748122 Daci_2553 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001563576.1 2826600 D 398578 CDS YP_001563577.1 160897995 5748123 2827346..2828338 1 NC_010002.1 PFAM: inner-membrane translocator; KEGG: vei:Veis_0328 inner-membrane translocator; inner-membrane translocator 2828338 5748123 Daci_2554 Delftia acidovorans SPH-1 inner-membrane translocator YP_001563577.1 2827346 D 398578 CDS YP_001563578.1 160897996 5748124 2828352..2829419 1 NC_010002.1 PFAM: inner-membrane translocator; KEGG: vei:Veis_0326 inner-membrane translocator; inner-membrane translocator 2829419 5748124 Daci_2555 Delftia acidovorans SPH-1 inner-membrane translocator YP_001563578.1 2828352 D 398578 CDS YP_001563579.1 160897997 5748125 2829472..2831676 1 NC_010002.1 KEGG: pol:Bpro_4732 putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane; putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane 2831676 5748125 Daci_2556 Delftia acidovorans SPH-1 putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane YP_001563579.1 2829472 D 398578 CDS YP_001563580.1 160897998 5748126 2831742..2832650 1 NC_010002.1 PFAM: alpha/beta hydrolase fold; KEGG: ajs:Ajs_1646 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 2832650 5748126 Daci_2557 Delftia acidovorans SPH-1 alpha/beta hydrolase fold protein YP_001563580.1 2831742 D 398578 CDS YP_001563581.1 160897999 5748127 2832760..2833755 1 NC_010002.1 PFAM: Rhodanese domain protein; KEGG: ajs:Ajs_1647 rhodanese domain protein; rhodanese domain-containing protein 2833755 5748127 Daci_2558 Delftia acidovorans SPH-1 rhodanese domain-containing protein YP_001563581.1 2832760 D 398578 CDS YP_001563582.1 160898000 5748128 complement(2833774..2833947) 1 NC_010002.1 KEGG: ajs:Ajs_1648 hypothetical protein; hypothetical protein 2833947 5748128 Daci_2559 Delftia acidovorans SPH-1 hypothetical protein YP_001563582.1 2833774 R 398578 CDS YP_001563583.1 160898001 5748129 complement(2833959..2835071) 1 NC_010002.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: ajs:Ajs_1649 protein of unknown function DUF395, YeeE/YedE; hypothetical protein 2835071 5748129 Daci_2560 Delftia acidovorans SPH-1 hypothetical protein YP_001563583.1 2833959 R 398578 CDS YP_001563584.1 160898002 5748130 complement(2835150..2836124) 1 NC_010002.1 PFAM: Rhodanese domain protein; KEGG: ajs:Ajs_1650 rhodanese domain protein; rhodanese domain-containing protein 2836124 5748130 Daci_2561 Delftia acidovorans SPH-1 rhodanese domain-containing protein YP_001563584.1 2835150 R 398578 CDS YP_001563585.1 160898003 5748131 complement(2836271..2837368) 1 NC_010002.1 PFAM: ferrochelatase; KEGG: mpt:Mpe_A2495 ferrochelatase; ferrochelatase 2837368 5748131 Daci_2562 Delftia acidovorans SPH-1 ferrochelatase YP_001563585.1 2836271 R 398578 CDS YP_001563586.1 160898004 5748132 2837460..2838230 1 NC_010002.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: vei:Veis_1575 HAD-superfamily hydrolase, subfamily IA, variant 3; HAD family hydrolase 2838230 5748132 Daci_2563 Delftia acidovorans SPH-1 HAD family hydrolase YP_001563586.1 2837460 D 398578 CDS YP_001563587.1 160898005 5748133 2838261..2839094 1 NC_010002.1 KEGG: vei:Veis_1576 integral membrane protein; integral membrane protein 2839094 5748133 Daci_2564 Delftia acidovorans SPH-1 integral membrane protein YP_001563587.1 2838261 D 398578 CDS YP_001563588.1 160898006 5748134 2839151..2839363 1 NC_010002.1 KEGG: vei:Veis_1577 hypothetical protein; hypothetical protein 2839363 5748134 Daci_2565 Delftia acidovorans SPH-1 hypothetical protein YP_001563588.1 2839151 D 398578 CDS YP_001563589.1 160898007 5748135 complement(2839538..2840521) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: har:HEAR0415 conserved hypothetical protein; putative exported protein; hypothetical protein 2840521 5748135 Daci_2566 Delftia acidovorans SPH-1 hypothetical protein YP_001563589.1 2839538 R 398578 CDS YP_001563590.1 160898008 5748136 complement(2840654..2841517) 1 NC_010002.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bxe:Bxe_B0974 3-hydroxyisobutyrate dehydrogenase; 3-hydroxyisobutyrate dehydrogenase 2841517 5748136 Daci_2567 Delftia acidovorans SPH-1 3-hydroxyisobutyrate dehydrogenase YP_001563590.1 2840654 R 398578 CDS YP_001563591.1 160898009 5748137 complement(2841528..2841926) 1 NC_010002.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: ret:RHE_PD00115 gamma-carboxymuconolactone decarboxylase protein; carboxymuconolactone decarboxylase 2841926 5748137 Daci_2568 Delftia acidovorans SPH-1 carboxymuconolactone decarboxylase YP_001563591.1 2841528 R 398578 CDS YP_001563592.1 160898010 5748138 2842094..2842777 1 NC_010002.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: acr:Acry_3403 transcriptional regulator, GntR family; GntR family transcriptional regulator 2842777 5748138 Daci_2569 Delftia acidovorans SPH-1 GntR family transcriptional regulator YP_001563592.1 2842094 D 398578 CDS YP_001563593.1 160898011 5748139 complement(2842817..2843836) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: aav:Aave_3271 uncharacterized protein UPF0065; hypothetical protein 2843836 5748139 Daci_2570 Delftia acidovorans SPH-1 hypothetical protein YP_001563593.1 2842817 R 398578 CDS YP_001563594.1 160898012 5748140 complement(2843960..2845348) 1 NC_010002.1 TIGRFAM: squalene-associated FAD-dependent desaturase; PFAM: amine oxidase; KEGG: ajs:Ajs_1201 amine oxidase; squalene-associated FAD-dependent desaturase 2845348 5748140 Daci_2571 Delftia acidovorans SPH-1 squalene-associated FAD-dependent desaturase YP_001563594.1 2843960 R 398578 CDS YP_001563595.1 160898013 5748141 complement(2845345..2846190) 1 NC_010002.1 TIGRFAM: squalene synthase HpnD; PFAM: Squalene/phytoene synthase; KEGG: ajs:Ajs_1202 squalene/phytoene synthase; squalene synthase 2846190 5748141 Daci_2572 Delftia acidovorans SPH-1 squalene synthase YP_001563595.1 2845345 R 398578 CDS YP_001563596.1 160898014 5748142 complement(2846258..2847142) 1 NC_010002.1 TIGRFAM: squalene synthase HpnC; PFAM: Squalene/phytoene synthase; KEGG: ajs:Ajs_1205 squalene/phytoene synthase; squalene synthase 2847142 5748142 Daci_2573 Delftia acidovorans SPH-1 squalene synthase YP_001563596.1 2846258 R 398578 CDS YP_001563597.1 160898015 5748143 2847317..2848567 1 NC_010002.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: aav:Aave_1462 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 2848567 5748143 Daci_2574 Delftia acidovorans SPH-1 RND family efflux transporter MFP subunit YP_001563597.1 2847317 D 398578 CDS YP_001563598.1 160898016 5748144 2848564..2851779 1 NC_010002.1 PFAM: acriflavin resistance protein; KEGG: aav:Aave_1461 acriflavin resistance protein; acriflavin resistance protein 2851779 5748144 Daci_2575 Delftia acidovorans SPH-1 acriflavin resistance protein YP_001563598.1 2848564 D 398578 CDS YP_001563599.1 160898017 5748146 2852172..2853188 1 NC_010002.1 PFAM: integrase family protein; KEGG: bbr:BB2185 integrase; integrase family protein 2853188 5748146 Daci_2576 Delftia acidovorans SPH-1 integrase family protein YP_001563599.1 2852172 D 398578 CDS YP_001563600.1 160898018 5748147 2853308..2853715 1 NC_010002.1 PFAM: helix-turn-helix domain protein; KEGG: rso:RSc1447 putative transcription regulator protein; XRE family transcriptional regulator 2853715 5748147 Daci_2577 Delftia acidovorans SPH-1 XRE family transcriptional regulator YP_001563600.1 2853308 D 398578 CDS YP_001563601.1 160898019 5748148 2853715..2855022 1 NC_010002.1 TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein; KEGG: pol:Bpro_0337 HipA-like; HipA domain-containing protein 2855022 5748148 Daci_2578 Delftia acidovorans SPH-1 HipA domain-containing protein YP_001563601.1 2853715 D 398578 CDS YP_001563602.1 160898020 5748149 complement(2855049..2855255) 1 NC_010002.1 hypothetical protein 2855255 5748149 Daci_2579 Delftia acidovorans SPH-1 hypothetical protein YP_001563602.1 2855049 R 398578 CDS YP_001563603.1 160898021 5748150 complement(2855290..2855538) 1 NC_010002.1 hypothetical protein 2855538 5748150 Daci_2580 Delftia acidovorans SPH-1 hypothetical protein YP_001563603.1 2855290 R 398578 CDS YP_001563604.1 160898022 5748151 complement(2855560..2857539) 1 NC_010002.1 PFAM: replication gene A; KEGG: bps:BPSS1052 hypothetical bacteriophage replication protein; replication gene A 2857539 5748151 Daci_2581 Delftia acidovorans SPH-1 replication gene A YP_001563604.1 2855560 R 398578 CDS YP_001563605.1 160898023 5748152 complement(2857544..2857996) 1 NC_010002.1 hypothetical protein 2857996 5748152 Daci_2582 Delftia acidovorans SPH-1 hypothetical protein YP_001563605.1 2857544 R 398578 CDS YP_001563606.1 160898024 5748153 complement(2858105..2858428) 1 NC_010002.1 PFAM: transcriptional activator Ogr/delta; KEGG: bps:BPSL0138 hypothetical protein; transcriptional activator Ogr/delta 2858428 5748153 Daci_2583 Delftia acidovorans SPH-1 transcriptional activator Ogr/delta YP_001563606.1 2858105 R 398578 CDS YP_001563607.1 160898025 5748154 complement(2858490..2858720) 1 NC_010002.1 hypothetical protein 2858720 5748154 Daci_2584 Delftia acidovorans SPH-1 hypothetical protein YP_001563607.1 2858490 R 398578 CDS YP_001563608.1 160898026 5748155 2858798..2859130 1 NC_010002.1 SMART: helix-turn-helix domain protein; KEGG: pna:Pnap_3316 putative transcriptional regulator, XRE family; XRE family transcriptional regulator 2859130 5748155 Daci_2585 Delftia acidovorans SPH-1 XRE family transcriptional regulator YP_001563608.1 2858798 D 398578 CDS YP_001563609.1 160898027 5748156 complement(2859179..2860180) 1 NC_010002.1 PFAM: late control D family protein; KEGG: pna:Pnap_3315 phage late control D family protein; late control D family protein 2860180 5748156 Daci_2586 Delftia acidovorans SPH-1 late control D family protein YP_001563609.1 2859179 R 398578 CDS YP_001563610.1 160898028 5748157 complement(2860180..2860620) 1 NC_010002.1 PFAM: P2 GpU family protein; KEGG: pna:Pnap_3314 phage P2 GpU family protein; P2 GpU family protein 2860620 5748157 Daci_2587 Delftia acidovorans SPH-1 P2 GpU family protein YP_001563610.1 2860180 R 398578 CDS YP_001563611.1 160898029 5748158 complement(2860632..2863469) 1 NC_010002.1 TIGRFAM: phage tail tape measure protein, TP901 family; KEGG: pna:Pnap_3313 phage tail tape measure protein, TP901 family; TP901 family phage tail tape measure protein 2863469 5748158 Daci_2588 Delftia acidovorans SPH-1 TP901 family phage tail tape measure protein YP_001563611.1 2860632 R 398578 CDS YP_001563612.1 160898030 5748159 complement(2863583..2863699) 1 NC_010002.1 PFAM: P2 GpE family protein; KEGG: pna:Pnap_3312 phage P2 GpE family protein; P2 GpE family protein 2863699 5748159 Daci_2589 Delftia acidovorans SPH-1 P2 GpE family protein YP_001563612.1 2863583 R 398578 CDS YP_001563613.1 160898031 5748160 complement(2863708..2864067) 1 NC_010002.1 PFAM: tail E family protein; KEGG: rso:RSc1916 probable phage-related protein; tail E family protein 2864067 5748160 Daci_2590 Delftia acidovorans SPH-1 tail E family protein YP_001563613.1 2863708 R 398578 CDS YP_001563614.1 160898032 5748161 complement(2864156..2864665) 1 NC_010002.1 TIGRFAM: phage major tail tube protein; PFAM: major tail tube protein; KEGG: pna:Pnap_3309 phage major tail tube protein; phage major tail tube protein 2864665 5748161 Daci_2591 Delftia acidovorans SPH-1 phage major tail tube protein YP_001563614.1 2864156 R 398578 CDS YP_001563615.1 160898033 5748162 complement(2864729..2865922) 1 NC_010002.1 PFAM: tail sheath protein; KEGG: pna:Pnap_3308 phage tail sheath protein; tail sheath protein 2865922 5748162 Daci_2592 Delftia acidovorans SPH-1 tail sheath protein YP_001563615.1 2864729 R 398578 CDS YP_001563616.1 160898034 5748163 complement(2865980..2866465) 1 NC_010002.1 hypothetical protein 2866465 5748163 Daci_2593 Delftia acidovorans SPH-1 hypothetical protein YP_001563616.1 2865980 R 398578 CDS YP_001563617.1 160898035 5748164 complement(2867208..2867894) 1 NC_010002.1 KEGG: mra:MRA_0288 PE-PGRS family protein; hypothetical protein 2867894 5748164 Daci_2594 Delftia acidovorans SPH-1 hypothetical protein YP_001563617.1 2867208 R 398578 CDS YP_001563618.1 160898036 5748165 complement(2867891..2868181) 1 NC_010002.1 hypothetical protein 2868181 5748165 Daci_2595 Delftia acidovorans SPH-1 hypothetical protein YP_001563618.1 2867891 R 398578 CDS YP_001563619.1 160898037 5748166 complement(2868178..2869011) 1 NC_010002.1 KEGG: mbo:Mb3538 PE-PGRS family protein; hypothetical protein 2869011 5748166 Daci_2596 Delftia acidovorans SPH-1 hypothetical protein YP_001563619.1 2868178 R 398578 CDS YP_001563620.1 160898038 5748167 complement(2869008..2869541) 1 NC_010002.1 hypothetical protein 2869541 5748167 Daci_2597 Delftia acidovorans SPH-1 hypothetical protein YP_001563620.1 2869008 R 398578 CDS YP_001563621.1 160898039 5748168 complement(2869544..2872660) 1 NC_010002.1 KEGG: oan:Oant_1495 virulence-associated protein; virulence-associated protein 2872660 5748168 Daci_2598 Delftia acidovorans SPH-1 virulence-associated protein YP_001563621.1 2869544 R 398578 CDS YP_001563622.1 160898040 5748169 complement(2872671..2873156) 1 NC_010002.1 KEGG: syf:Synpcc7942_0742 hypothetical protein; hypothetical protein 2873156 5748169 Daci_2599 Delftia acidovorans SPH-1 hypothetical protein YP_001563622.1 2872671 R 398578 CDS YP_001563623.1 160898041 5748170 complement(2873159..2874139) 1 NC_010002.1 KEGG: syf:Synpcc7942_0741 phage tail protein I; hypothetical protein 2874139 5748170 Daci_2600 Delftia acidovorans SPH-1 hypothetical protein YP_001563623.1 2873159 R 398578 CDS YP_001563624.1 160898042 5748171 complement(2874136..2874993) 1 NC_010002.1 PFAM: Baseplate J family protein; KEGG: yps:YPTB1749 probable bacteriophage protein; baseplate J family protein 2874993 5748171 Daci_2601 Delftia acidovorans SPH-1 baseplate J family protein YP_001563624.1 2874136 R 398578 CDS YP_001563625.1 160898043 5748172 complement(2874990..2875340) 1 NC_010002.1 PFAM: GPW/gp25 family protein; KEGG: csa:Csal_1387 gpW/GP25; GPW/gp25 family protein 2875340 5748172 Daci_2602 Delftia acidovorans SPH-1 GPW/gp25 family protein YP_001563625.1 2874990 R 398578 CDS YP_001563626.1 160898044 5748173 complement(2875337..2875990) 1 NC_010002.1 TIGRFAM: phage baseplate assembly protein V; PFAM: baseplate assembly protein V; KEGG: stm:STM2710 phage baseplate assembly-like protein; phage baseplate assembly protein V 2875990 5748173 Daci_2603 Delftia acidovorans SPH-1 phage baseplate assembly protein V YP_001563626.1 2875337 R 398578 CDS YP_001563627.1 160898045 5748174 complement(2876041..2876550) 1 NC_010002.1 PFAM: P2 phage tail completion R family protein; KEGG: rso:RSc1929 probable tail completion-like protein; P2 phage tail completion R family protein 2876550 5748174 Daci_2604 Delftia acidovorans SPH-1 P2 phage tail completion R family protein YP_001563627.1 2876041 R 398578 CDS YP_001563628.1 160898046 5748175 complement(2876534..2877100) 1 NC_010002.1 KEGG: bpe:BP3355 hypothetical protein; hypothetical protein 2877100 5748175 Daci_2605 Delftia acidovorans SPH-1 hypothetical protein YP_001563628.1 2876534 R 398578 CDS YP_001563629.1 160898047 5748176 complement(2877100..2877681) 1 NC_010002.1 KEGG: aav:Aave_2903 prophage LambdaSo, lysozyme, putative; prophage LambdaSo, lysozyme 2877681 5748176 Daci_2606 Delftia acidovorans SPH-1 prophage LambdaSo, lysozyme YP_001563629.1 2877100 R 398578 CDS YP_001563630.1 160898048 5748177 complement(2877678..2877944) 1 NC_010002.1 KEGG: pna:Pnap_3295 hypothetical protein; hypothetical protein 2877944 5748177 Daci_2607 Delftia acidovorans SPH-1 hypothetical protein YP_001563630.1 2877678 R 398578 CDS YP_001563631.1 160898049 5748178 complement(2877946..2878149) 1 NC_010002.1 PFAM: tail X family protein; KEGG: spt:SPA2577 putative phage tail protein; tail X family protein 2878149 5748178 Daci_2608 Delftia acidovorans SPH-1 tail X family protein YP_001563631.1 2877946 R 398578 CDS YP_001563632.1 160898050 5748179 complement(2878535..2878753) 1 NC_010002.1 hypothetical protein 2878753 5748179 Daci_2609 Delftia acidovorans SPH-1 hypothetical protein YP_001563632.1 2878535 R 398578 CDS YP_001563633.1 160898051 5748180 2879182..2880198 1 NC_010002.1 PFAM: integrase family protein; KEGG: bbr:BB2185 integrase; integrase family protein 2880198 5748180 Daci_2610 Delftia acidovorans SPH-1 integrase family protein YP_001563633.1 2879182 D 398578 CDS YP_001563634.1 160898052 5748181 2880318..2880725 1 NC_010002.1 PFAM: helix-turn-helix domain protein; KEGG: rso:RSc1447 putative transcription regulator protein; XRE family transcriptional regulator 2880725 5748181 Daci_2611 Delftia acidovorans SPH-1 XRE family transcriptional regulator YP_001563634.1 2880318 D 398578 CDS YP_001563635.1 160898053 5748182 2880725..2882032 1 NC_010002.1 TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein; KEGG: pol:Bpro_0337 HipA-like; HipA domain-containing protein 2882032 5748182 Daci_2612 Delftia acidovorans SPH-1 HipA domain-containing protein YP_001563635.1 2880725 D 398578 CDS YP_001563636.1 160898054 5748183 complement(2882059..2882265) 1 NC_010002.1 hypothetical protein 2882265 5748183 Daci_2613 Delftia acidovorans SPH-1 hypothetical protein YP_001563636.1 2882059 R 398578 CDS YP_001563637.1 160898055 5748184 complement(2882300..2882548) 1 NC_010002.1 hypothetical protein 2882548 5748184 Daci_2614 Delftia acidovorans SPH-1 hypothetical protein YP_001563637.1 2882300 R 398578 CDS YP_001563638.1 160898056 5748185 complement(2882570..2884549) 1 NC_010002.1 PFAM: replication gene A; KEGG: bps:BPSS1052 hypothetical bacteriophage replication protein; replication gene A 2884549 5748185 Daci_2615 Delftia acidovorans SPH-1 replication gene A YP_001563638.1 2882570 R 398578 CDS YP_001563639.1 160898057 5748186 complement(2884554..2885006) 1 NC_010002.1 hypothetical protein 2885006 5748186 Daci_2616 Delftia acidovorans SPH-1 hypothetical protein YP_001563639.1 2884554 R 398578 CDS YP_001563640.1 160898058 5748187 complement(2885115..2885438) 1 NC_010002.1 PFAM: transcriptional activator Ogr/delta; KEGG: bps:BPSL0138 hypothetical protein; transcriptional activator Ogr/delta 2885438 5748187 Daci_2617 Delftia acidovorans SPH-1 transcriptional activator Ogr/delta YP_001563640.1 2885115 R 398578 CDS YP_001563641.1 160898059 5748188 complement(2885500..2885730) 1 NC_010002.1 hypothetical protein 2885730 5748188 Daci_2618 Delftia acidovorans SPH-1 hypothetical protein YP_001563641.1 2885500 R 398578 CDS YP_001563642.1 160898060 5748189 2885808..2886140 1 NC_010002.1 SMART: helix-turn-helix domain protein; KEGG: pna:Pnap_3316 putative transcriptional regulator, XRE family; XRE family transcriptional regulator 2886140 5748189 Daci_2619 Delftia acidovorans SPH-1 XRE family transcriptional regulator YP_001563642.1 2885808 D 398578 CDS YP_001563643.1 160898061 5748190 complement(2886189..2887190) 1 NC_010002.1 PFAM: late control D family protein; KEGG: pna:Pnap_3315 phage late control D family protein; late control D family protein 2887190 5748190 Daci_2620 Delftia acidovorans SPH-1 late control D family protein YP_001563643.1 2886189 R 398578 CDS YP_001563644.1 160898062 5748191 complement(2887190..2887630) 1 NC_010002.1 PFAM: P2 GpU family protein; KEGG: pna:Pnap_3314 phage P2 GpU family protein; P2 GpU family protein 2887630 5748191 Daci_2621 Delftia acidovorans SPH-1 P2 GpU family protein YP_001563644.1 2887190 R 398578 CDS YP_001563645.1 160898063 5748192 complement(2887642..2890479) 1 NC_010002.1 TIGRFAM: phage tail tape measure protein, TP901 family; KEGG: pna:Pnap_3313 phage tail tape measure protein, TP901 family; TP901 family phage tail tape measure protein 2890479 5748192 Daci_2622 Delftia acidovorans SPH-1 TP901 family phage tail tape measure protein YP_001563645.1 2887642 R 398578 CDS YP_001563646.1 160898064 5748193 complement(2890593..2890709) 1 NC_010002.1 PFAM: P2 GpE family protein; KEGG: pna:Pnap_3312 phage P2 GpE family protein; P2 GpE family protein 2890709 5748193 Daci_2623 Delftia acidovorans SPH-1 P2 GpE family protein YP_001563646.1 2890593 R 398578 CDS YP_001563647.1 160898065 5748194 complement(2890718..2891077) 1 NC_010002.1 PFAM: tail E family protein; KEGG: rso:RSc1916 probable phage-related protein; tail E family protein 2891077 5748194 Daci_2624 Delftia acidovorans SPH-1 tail E family protein YP_001563647.1 2890718 R 398578 CDS YP_001563648.1 160898066 5748195 complement(2891166..2891675) 1 NC_010002.1 TIGRFAM: phage major tail tube protein; PFAM: major tail tube protein; KEGG: pna:Pnap_3309 phage major tail tube protein; phage major tail tube protein 2891675 5748195 Daci_2625 Delftia acidovorans SPH-1 phage major tail tube protein YP_001563648.1 2891166 R 398578 CDS YP_001563649.1 160898067 5748196 complement(2891739..2892932) 1 NC_010002.1 PFAM: tail sheath protein; KEGG: pna:Pnap_3308 phage tail sheath protein; tail sheath protein 2892932 5748196 Daci_2626 Delftia acidovorans SPH-1 tail sheath protein YP_001563649.1 2891739 R 398578 CDS YP_001563650.1 160898068 5748197 complement(2892990..2893475) 1 NC_010002.1 hypothetical protein 2893475 5748197 Daci_2627 Delftia acidovorans SPH-1 hypothetical protein YP_001563650.1 2892990 R 398578 CDS YP_001563651.1 160898069 5748198 complement(2894218..2894904) 1 NC_010002.1 KEGG: mra:MRA_0288 PE-PGRS family protein; hypothetical protein 2894904 5748198 Daci_2628 Delftia acidovorans SPH-1 hypothetical protein YP_001563651.1 2894218 R 398578 CDS YP_001563652.1 160898070 5748199 complement(2894901..2895191) 1 NC_010002.1 hypothetical protein 2895191 5748199 Daci_2629 Delftia acidovorans SPH-1 hypothetical protein YP_001563652.1 2894901 R 398578 CDS YP_001563653.1 160898071 5748200 complement(2895188..2896021) 1 NC_010002.1 KEGG: mbo:Mb3538 PE-PGRS family protein; hypothetical protein 2896021 5748200 Daci_2630 Delftia acidovorans SPH-1 hypothetical protein YP_001563653.1 2895188 R 398578 CDS YP_001563654.1 160898072 5748201 complement(2896018..2896551) 1 NC_010002.1 hypothetical protein 2896551 5748201 Daci_2631 Delftia acidovorans SPH-1 hypothetical protein YP_001563654.1 2896018 R 398578 CDS YP_001563655.1 160898073 5748202 complement(2896554..2899670) 1 NC_010002.1 KEGG: oan:Oant_1495 virulence-associated protein; virulence-associated protein 2899670 5748202 Daci_2632 Delftia acidovorans SPH-1 virulence-associated protein YP_001563655.1 2896554 R 398578 CDS YP_001563656.1 160898074 5748203 complement(2899681..2900166) 1 NC_010002.1 KEGG: syf:Synpcc7942_0742 hypothetical protein; hypothetical protein 2900166 5748203 Daci_2633 Delftia acidovorans SPH-1 hypothetical protein YP_001563656.1 2899681 R 398578 CDS YP_001563657.1 160898075 5748204 complement(2900169..2901149) 1 NC_010002.1 KEGG: syf:Synpcc7942_0741 phage tail protein I; hypothetical protein 2901149 5748204 Daci_2634 Delftia acidovorans SPH-1 hypothetical protein YP_001563657.1 2900169 R 398578 CDS YP_001563658.1 160898076 5748205 complement(2901146..2902003) 1 NC_010002.1 PFAM: Baseplate J family protein; KEGG: yps:YPTB1749 probable bacteriophage protein; baseplate J family protein 2902003 5748205 Daci_2635 Delftia acidovorans SPH-1 baseplate J family protein YP_001563658.1 2901146 R 398578 CDS YP_001563659.1 160898077 5748206 complement(2902000..2902350) 1 NC_010002.1 PFAM: GPW/gp25 family protein; KEGG: csa:Csal_1387 gpW/GP25; GPW/gp25 family protein 2902350 5748206 Daci_2636 Delftia acidovorans SPH-1 GPW/gp25 family protein YP_001563659.1 2902000 R 398578 CDS YP_001563660.1 160898078 5748207 complement(2902347..2903072) 1 NC_010002.1 TIGRFAM: phage baseplate assembly protein V; PFAM: baseplate assembly protein V; KEGG: stm:STM2710 phage baseplate assembly-like protein; phage baseplate assembly protein V 2903072 5748207 Daci_2637 Delftia acidovorans SPH-1 phage baseplate assembly protein V YP_001563660.1 2902347 R 398578 CDS YP_001563661.1 160898079 5748208 complement(2903051..2903560) 1 NC_010002.1 PFAM: P2 phage tail completion R family protein; KEGG: rso:RSc1929 probable tail completion-like protein; P2 phage tail completion R family protein 2903560 5748208 Daci_2638 Delftia acidovorans SPH-1 P2 phage tail completion R family protein YP_001563661.1 2903051 R 398578 CDS YP_001563662.1 160898080 5748209 complement(2903544..2904110) 1 NC_010002.1 KEGG: bpe:BP3355 hypothetical protein; hypothetical protein 2904110 5748209 Daci_2639 Delftia acidovorans SPH-1 hypothetical protein YP_001563662.1 2903544 R 398578 CDS YP_001563663.1 160898081 5748210 complement(2904110..2904691) 1 NC_010002.1 KEGG: aav:Aave_2903 prophage LambdaSo, lysozyme, putative; prophage LambdaSo, lysozyme 2904691 5748210 Daci_2640 Delftia acidovorans SPH-1 prophage LambdaSo, lysozyme YP_001563663.1 2904110 R 398578 CDS YP_001563664.1 160898082 5748211 complement(2904688..2904954) 1 NC_010002.1 KEGG: pna:Pnap_3295 hypothetical protein; hypothetical protein 2904954 5748211 Daci_2641 Delftia acidovorans SPH-1 hypothetical protein YP_001563664.1 2904688 R 398578 CDS YP_001563665.1 160898083 5748212 complement(2904956..2905159) 1 NC_010002.1 PFAM: tail X family protein; KEGG: spt:SPA2577 putative phage tail protein; tail X family protein 2905159 5748212 Daci_2642 Delftia acidovorans SPH-1 tail X family protein YP_001563665.1 2904956 R 398578 CDS YP_001563666.1 160898084 5748213 complement(2905545..2905763) 1 NC_010002.1 hypothetical protein 2905763 5748213 Daci_2643 Delftia acidovorans SPH-1 hypothetical protein YP_001563666.1 2905545 R 398578 CDS YP_001563667.1 160898085 5748214 2906335..2907645 1 NC_010002.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 2907645 tig 5748214 tig Delftia acidovorans SPH-1 trigger factor YP_001563667.1 2906335 D 398578 CDS YP_001563668.1 160898086 5748215 2907781..2908389 1 NC_010002.1 KEGG: vei:Veis_4371 ATP-dependent Clp protease, proteolytic subunit ClpP; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: peptidase S14 ClpP; ATP-dependent Clp protease, proteolytic subunit ClpP 2908389 5748215 Daci_2645 Delftia acidovorans SPH-1 ATP-dependent Clp protease, proteolytic subunit ClpP YP_001563668.1 2907781 D 398578 CDS YP_001563669.1 160898087 5748216 2908497..2909759 1 NC_010002.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 2909759 clpX 5748216 clpX Delftia acidovorans SPH-1 ATP-dependent protease ATP-binding subunit ClpX YP_001563669.1 2908497 D 398578 CDS YP_001563670.1 160898088 5748217 2909880..2912294 1 NC_010002.1 KEGG: aav:Aave_1457 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent protease La 2912294 5748217 Daci_2647 Delftia acidovorans SPH-1 ATP-dependent protease La YP_001563670.1 2909880 D 398578 CDS YP_001563671.1 160898089 5748222 2913252..2914016 1 NC_010002.1 PFAM: peptidase M48 Ste24p; KEGG: bpa:BPP1393 putative lipoprotein; peptidase M48 Ste24p 2914016 5748222 Daci_2648 Delftia acidovorans SPH-1 peptidase M48 Ste24p YP_001563671.1 2913252 D 398578 CDS YP_001563672.1 160898090 5748225 2914685..2915386 1 NC_010002.1 KEGG: ajs:Ajs_2624 hypothetical protein; hypothetical protein 2915386 5748225 Daci_2649 Delftia acidovorans SPH-1 hypothetical protein YP_001563672.1 2914685 D 398578 CDS YP_001563673.1 160898091 5748226 2915419..2916030 1 NC_010002.1 PFAM: protein of unknown function DUF45; KEGG: ajs:Ajs_2868 protein of unknown function DUF45; hypothetical protein 2916030 5748226 Daci_2650 Delftia acidovorans SPH-1 hypothetical protein YP_001563673.1 2915419 D 398578 CDS YP_001563674.1 160898092 5748227 complement(2916032..2916922) 1 NC_010002.1 KEGG: ajs:Ajs_2867 glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu/hydantoin racemase; glutamate racemase 2916922 5748227 Daci_2651 Delftia acidovorans SPH-1 glutamate racemase YP_001563674.1 2916032 R 398578 CDS YP_001563675.1 160898093 5748228 complement(2916981..2917568) 1 NC_010002.1 PFAM: GCN5-related N-acetyltransferase; KEGG: aav:Aave_3219 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2917568 5748228 Daci_2652 Delftia acidovorans SPH-1 N-acetyltransferase GCN5 YP_001563675.1 2916981 R 398578 CDS YP_001563676.1 160898094 5748229 complement(2917565..2918197) 1 NC_010002.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mhu:Mhun_2814 UbiE/COQ5 methyltransferase; type 11 methyltransferase 2918197 5748229 Daci_2653 Delftia acidovorans SPH-1 type 11 methyltransferase YP_001563676.1 2917565 R 398578 CDS YP_001563677.1 160898095 5748230 complement(2918298..2919851) 1 NC_010002.1 TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: ajs:Ajs_1056 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha subunit; tartrate/fumarate subfamily Fe-S type hydro-lyase subunit alpha 2919851 5748230 Daci_2654 Delftia acidovorans SPH-1 tartrate/fumarate subfamily Fe-S type hydro-lyase subunit alpha YP_001563677.1 2918298 R 398578 CDS YP_001563678.1 160898096 5748231 2920165..2921556 1 NC_010002.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 2921556 fumC 5748231 fumC Delftia acidovorans SPH-1 fumarate hydratase YP_001563678.1 2920165 D 398578 CDS YP_001563679.1 160898097 5748232 complement(2921622..2922521) 1 NC_010002.1 PFAM: putative esterase; KEGG: bte:BTH_II1456 esterase, putative; putative esterase 2922521 5748232 Daci_2656 Delftia acidovorans SPH-1 putative esterase YP_001563679.1 2921622 R 398578 CDS YP_001563680.1 160898098 5748233 complement(2922668..2923699) 1 NC_010002.1 PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_3135 drug resistance transporter, Bcr/CflA subfamily; major facilitator transporter 2923699 5748233 Daci_2657 Delftia acidovorans SPH-1 major facilitator transporter YP_001563680.1 2922668 R 398578 CDS YP_001563681.1 160898099 5748234 complement(2923701..2924210) 1 NC_010002.1 PFAM: regulatory protein MarR; KEGG: xau:Xaut_1307 transcriptional regulator, MarR family; MarR family transcriptional regulator 2924210 5748234 Daci_2658 Delftia acidovorans SPH-1 MarR family transcriptional regulator YP_001563681.1 2923701 R 398578 CDS YP_001563682.1 160898100 5748235 complement(2924361..2925047) 1 NC_010002.1 KEGG: ajs:Ajs_1106 hypothetical protein; hypothetical protein 2925047 5748235 Daci_2659 Delftia acidovorans SPH-1 hypothetical protein YP_001563682.1 2924361 R 398578 CDS YP_001563683.1 160898101 5748236 2925187..2925825 1 NC_010002.1 PFAM: Putative ParB-like nuclease; KEGG: bte:BTH_I2525 hypothetical protein; putative ParB-like nuclease 2925825 5748236 Daci_2660 Delftia acidovorans SPH-1 putative ParB-like nuclease YP_001563683.1 2925187 D 398578 CDS YP_001563684.1 160898102 5748237 2925825..2927450 1 NC_010002.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; sulphate transporter; KEGG: rme:Rmet_4635 sulphate transporter; sulfate transporter 2927450 5748237 Daci_2661 Delftia acidovorans SPH-1 sulfate transporter YP_001563684.1 2925825 D 398578 CDS YP_001563685.1 160898103 5748238 complement(2927472..2928458) 1 NC_010002.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: xcv:XCV2678 transcriptional regulator, LacI family; LacI family transcriptional regulator 2928458 5748238 Daci_2662 Delftia acidovorans SPH-1 LacI family transcriptional regulator YP_001563685.1 2927472 R 398578 CDS YP_001563686.1 160898104 5748239 2928564..2931137 1 NC_010002.1 TIGRFAM: phosphocarrier, HPr family; phosphoenolpyruvate-protein phosphotransferase; PFAM: phosphocarrier HPr protein; PEP-utilizing protein; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: xac:XAC2501 multiphosphoryl transfer protein; phosphoenolpyruvate-protein phosphotransferase 2931137 5748239 Daci_2663 Delftia acidovorans SPH-1 phosphoenolpyruvate-protein phosphotransferase YP_001563686.1 2928564 D 398578 CDS YP_001563687.1 160898105 5748240 2931134..2932099 1 NC_010002.1 KEGG: xcb:XC_1743 1-phosphofructokinase; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; 1-phosphofructokinase 2932099 5748240 Daci_2664 Delftia acidovorans SPH-1 1-phosphofructokinase YP_001563687.1 2931134 D 398578 CDS YP_001563688.1 160898106 5748241 2932123..2933850 1 NC_010002.1 TIGRFAM: PTS system, fructose-specific, IIB subunnit; PTS system, fructose subfamily, IIC subunit; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS fructose-specific IIB subunit; KEGG: xom:XOO_2652 PTS system fructose-specific IIBC component; PTS system fructose subfamily transporter subunit IIC 2933850 5748241 Daci_2665 Delftia acidovorans SPH-1 PTS system fructose subfamily transporter subunit IIC YP_001563688.1 2932123 D 398578 CDS YP_001563689.1 160898107 5748242 complement(2933909..2934955) 1 NC_010002.1 with ProVW, part of the high-affinity transport system for the osmoprotectant glycine betaine; glycine betaine transporter periplasmic subunit 2934955 proX 5748242 proX Delftia acidovorans SPH-1 glycine betaine transporter periplasmic subunit YP_001563689.1 2933909 R 398578 CDS YP_001563690.1 160898108 5748243 complement(2935066..2936265) 1 NC_010002.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_1064 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2936265 5748243 Daci_2667 Delftia acidovorans SPH-1 binding-protein-dependent transport system inner membrane protein YP_001563690.1 2935066 R 398578 CDS YP_001563691.1 160898109 5748244 complement(2936262..2937617) 1 NC_010002.1 KEGG: ajs:Ajs_1065 glycine betaine/L-proline ABC transporter, ATPase subunit; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase; glycine betaine/L-proline ABC transporter ATPase 2937617 5748244 Daci_2668 Delftia acidovorans SPH-1 glycine betaine/L-proline ABC transporter ATPase YP_001563691.1 2936262 R 398578 CDS YP_001563692.1 160898110 5748245 complement(2938768..2939670) 1 NC_010002.1 PFAM: methylenetetrahydrofolate reductase; KEGG: rme:Rmet_2988 methylenetetrahydrofolate reductase; methylenetetrahydrofolate reductase 2939670 5748245 Daci_2669 Delftia acidovorans SPH-1 methylenetetrahydrofolate reductase YP_001563692.1 2938768 R 398578 CDS YP_001563693.1 160898111 5748246 complement(2939762..2940430) 1 NC_010002.1 PFAM: protein of unknown function DUF208; KEGG: rme:Rmet_2989 protein of unknown function DUF208; hypothetical protein 2940430 5748246 Daci_2670 Delftia acidovorans SPH-1 hypothetical protein YP_001563693.1 2939762 R 398578 CDS YP_001563694.1 160898112 5748247 complement(2940427..2940927) 1 NC_010002.1 KEGG: rme:Rmet_2990 transcriptional regulator, LysR family; LysR family transcriptional regulator 2940927 5748247 Daci_2671 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001563694.1 2940427 R 398578 CDS YP_001563695.1 160898113 5748248 complement(2940968..2942506) 1 NC_010002.1 PFAM: Integrase catalytic region; KEGG: rme:Rmet_2991 integrase, catalytic region; integrase catalytic subunit 2942506 5748248 Daci_2672 Delftia acidovorans SPH-1 integrase catalytic subunit YP_001563695.1 2940968 R 398578 CDS YP_001563696.1 160898114 5748249 complement(2943084..2944067) 1 NC_010002.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: rme:Rmet_2992 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 2944067 5748249 Daci_2673 Delftia acidovorans SPH-1 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_001563696.1 2943084 R 398578 CDS YP_001563697.1 160898115 5748250 complement(2944076..2944876) 1 NC_010002.1 TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rme:Rmet_2993 phosphonate uptake transporter; phosphonate ABC transporter inner membrane subunit 2944876 5748250 Daci_2674 Delftia acidovorans SPH-1 phosphonate ABC transporter inner membrane subunit YP_001563697.1 2944076 R 398578 CDS YP_001563698.1 160898116 5748251 complement(2944873..2945751) 1 NC_010002.1 TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: rme:Rmet_2994 phosphonate-binding periplasmic protein; phosphonate ABC transporter periplasmic phosphonate-binding protein 2945751 5748251 Daci_2675 Delftia acidovorans SPH-1 phosphonate ABC transporter periplasmic phosphonate-binding protein YP_001563698.1 2944873 R 398578 CDS YP_001563699.1 160898117 5748252 complement(2945745..2946584) 1 NC_010002.1 KEGG: rme:Rmet_2995 phosphonate ABC transporter PhnC, ATP-binding; TIGRFAM: phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; phosphonate ABC transporter ATPase 2946584 5748252 Daci_2676 Delftia acidovorans SPH-1 phosphonate ABC transporter ATPase YP_001563699.1 2945745 R 398578 CDS YP_001563700.1 160898118 5748253 2946783..2947643 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rme:Rmet_2996 transcriptional regulator, LysR family; LysR family transcriptional regulator 2947643 5748253 Daci_2677 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001563700.1 2946783 D 398578 CDS YP_001563701.1 160898119 5748254 2947751..2948218 1 NC_010002.1 KEGG: rme:Rmet_2997 hypothetical protein; hypothetical protein 2948218 5748254 Daci_2678 Delftia acidovorans SPH-1 hypothetical protein YP_001563701.1 2947751 D 398578 CDS YP_001563702.1 160898120 5748255 complement(2948215..2951187) 1 NC_010002.1 PFAM: transposase Tn3 family protein; KEGG: ppd:Ppro_3845 transposase Tn3 family protein; transposase Tn3 family protein 2951187 5748255 Daci_2679 Delftia acidovorans SPH-1 transposase Tn3 family protein YP_001563702.1 2948215 R 398578 CDS YP_001563703.1 160898121 5748256 complement(2951190..2951747) 1 NC_010002.1 PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: ppd:Ppro_3846 resolvase, N-terminal domain; resolvase domain-containing protein 2951747 5748256 Daci_2680 Delftia acidovorans SPH-1 resolvase domain-containing protein YP_001563703.1 2951190 R 398578 CDS YP_001563704.1 160898122 5748257 complement(2951878..2953353) 1 NC_010002.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: ppd:Ppro_3847 RND efflux system, outer membrane lipoprotein, NodT family; RND efflux system outer membrane lipoprotein 2953353 5748257 Daci_2681 Delftia acidovorans SPH-1 RND efflux system outer membrane lipoprotein YP_001563704.1 2951878 R 398578 CDS YP_001563705.1 160898123 5748258 complement(2953340..2953813) 1 NC_010002.1 KEGG: maq:Maqu_1254 hypothetical protein; hypothetical protein 2953813 5748258 Daci_2682 Delftia acidovorans SPH-1 hypothetical protein YP_001563705.1 2953340 R 398578 CDS YP_001563706.1 160898124 5748259 complement(2953842..2954552) 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ppd:Ppro_3849 ABC transporter related; ABC transporter-like protein 2954552 5748259 Daci_2683 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001563706.1 2953842 R 398578 CDS YP_001563707.1 160898125 5748260 complement(2954554..2955759) 1 NC_010002.1 PFAM: protein of unknown function DUF214; KEGG: ppd:Ppro_3850 protein of unknown function DUF214; hypothetical protein 2955759 5748260 Daci_2684 Delftia acidovorans SPH-1 hypothetical protein YP_001563707.1 2954554 R 398578 CDS YP_001563708.1 160898126 5748261 complement(2955756..2956907) 1 NC_010002.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: ppd:Ppro_3851 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 2956907 5748261 Daci_2685 Delftia acidovorans SPH-1 RND family efflux transporter MFP subunit YP_001563708.1 2955756 R 398578 CDS YP_001563709.1 160898127 5748262 complement(2956904..2957512) 1 NC_010002.1 PFAM: regulatory protein TetR; KEGG: maq:Maqu_1250 transcriptional regulator, TetR family; TetR family transcriptional regulator 2957512 5748262 Daci_2686 Delftia acidovorans SPH-1 TetR family transcriptional regulator YP_001563709.1 2956904 R 398578 CDS YP_001563710.1 160898128 5748263 2957910..2958164 1 NC_010002.1 KEGG: pst:PSPTO_2851 SCO1/SenC family protein; SCO1/SenC family protein 2958164 5748263 Daci_2687 Delftia acidovorans SPH-1 SCO1/SenC family protein YP_001563710.1 2957910 D 398578 CDS YP_001563711.1 160898129 5748264 2958191..2958670 1 NC_010002.1 PFAM: protein of unknown function DUF461; KEGG: ajs:Ajs_3343 protein of unknown function DUF461; hypothetical protein 2958670 5748264 Daci_2688 Delftia acidovorans SPH-1 hypothetical protein YP_001563711.1 2958191 D 398578 CDS YP_001563712.1 160898130 5748265 complement(2958787..2959062) 1 NC_010002.1 KEGG: aav:Aave_0736 hypothetical protein; hypothetical protein 2959062 5748265 Daci_2689 Delftia acidovorans SPH-1 hypothetical protein YP_001563712.1 2958787 R 398578 CDS YP_001563713.1 160898131 5748266 complement(2959059..2960327) 1 NC_010002.1 PFAM: conjugation TrbI family protein; KEGG: pau:PA14_30850 TrbI-like protein; conjugation TrbI family protein 2960327 5748266 Daci_2690 Delftia acidovorans SPH-1 conjugation TrbI family protein YP_001563713.1 2959059 R 398578 CDS YP_001563714.1 160898132 5748267 complement(2960330..2961331) 1 NC_010002.1 TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: pau:PA14_30860 TrbG-like protein; P-type conjugative transfer protein TrbG 2961331 5748267 Daci_2691 Delftia acidovorans SPH-1 P-type conjugative transfer protein TrbG YP_001563714.1 2960330 R 398578 CDS YP_001563715.1 160898133 5748268 complement(2961328..2962032) 1 NC_010002.1 PFAM: Conjugal transfer protein; KEGG: ajs:Ajs_2904 conjugal transfer protein; conjugal transfer protein TrbF 2962032 5748268 Daci_2692 Delftia acidovorans SPH-1 conjugal transfer protein TrbF YP_001563715.1 2961328 R 398578 CDS YP_001563716.1 160898134 5748269 complement(2962051..2963403) 1 NC_010002.1 type IV secretion VirB6 family; conjugal transfer protein TrbL 2963403 5748269 Daci_2693 Delftia acidovorans SPH-1 conjugal transfer protein TrbL YP_001563716.1 2962051 R 398578 CDS YP_001563717.1 160898135 5748270 complement(2963400..2963726) 1 NC_010002.1 KEGG: ajs:Ajs_2906 putative lipoprotein; putative lipoprotein 2963726 5748270 Daci_2694 Delftia acidovorans SPH-1 putative lipoprotein YP_001563717.1 2963400 R 398578 CDS YP_001563718.1 160898136 5748271 complement(2963738..2964493) 1 NC_010002.1 TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: pau:PA14_30900 TrbJ-like protein; conjugal transfer protein TrbJ 2964493 5748271 Daci_2695 Delftia acidovorans SPH-1 conjugal transfer protein TrbJ YP_001563718.1 2963738 R 398578 CDS YP_001563719.1 160898137 5748272 complement(2964490..2966961) 1 NC_010002.1 type IV secretion system VirB4 family; conjugal transfer ATPase TrbE 2966961 5748272 Daci_2696 Delftia acidovorans SPH-1 conjugal transfer ATPase TrbE YP_001563719.1 2964490 R 398578 CDS YP_001563720.1 160898138 5748273 complement(2966976..2967248) 1 NC_010002.1 KEGG: rme:Rmet_1343 putative conjugal transfer TrbD transmembrane protein; putative conjugal transfer TrbD transmembrane protein 2967248 5748273 Daci_2697 Delftia acidovorans SPH-1 putative conjugal transfer TrbD transmembrane protein YP_001563720.1 2966976 R 398578 CDS YP_001563721.1 160898139 5748274 complement(2967245..2967622) 1 NC_010002.1 PFAM: Conjugal transfer protein TrbC; KEGG: ajs:Ajs_2910 conjugal transfer protein TrbC; conjugal transfer protein TrbC 2967622 5748274 Daci_2698 Delftia acidovorans SPH-1 conjugal transfer protein TrbC YP_001563721.1 2967245 R 398578 CDS YP_001563722.1 160898140 5748275 complement(2967619..2968653) 1 NC_010002.1 TIGRFAM: P-type conjugative transfer ATPase TrbB; PFAM: type II secretion system protein E; KEGG: ajs:Ajs_2911 type II secretion system protein E; P-type conjugative transfer ATPase TrbB 2968653 5748275 Daci_2699 Delftia acidovorans SPH-1 P-type conjugative transfer ATPase TrbB YP_001563722.1 2967619 R 398578 CDS YP_001563723.1 160898141 5748276 complement(2968650..2969114) 1 NC_010002.1 PFAM: CopG domain protein DNA-binding domain protein; KEGG: pau:PA14_30950 hypothetical protein; CopG/DNA-binding domain-containing protein 2969114 5748276 Daci_2700 Delftia acidovorans SPH-1 CopG/DNA-binding domain-containing protein YP_001563723.1 2968650 R 398578 CDS YP_001563724.1 160898142 5748277 complement(2969111..2971120) 1 NC_010002.1 type IV secretion VirD4 coupling protein family; conjugal transfer coupling protein TraG 2971120 5748277 Daci_2701 Delftia acidovorans SPH-1 conjugal transfer coupling protein TraG YP_001563724.1 2969111 R 398578 CDS YP_001563725.1 160898143 5748278 complement(2971337..2971492) 1 NC_010002.1 KEGG: rme:Rmet_1547 putative lipoprotein; putative lipoprotein 2971492 5748278 Daci_2702 Delftia acidovorans SPH-1 putative lipoprotein YP_001563725.1 2971337 R 398578 CDS YP_001563726.1 160898144 5748279 complement(2971590..2972504) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: shn:Shewana3_1278 transcriptional regulator, LysR family; LysR family transcriptional regulator 2972504 5748279 Daci_2703 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001563726.1 2971590 R 398578 CDS YP_001563727.1 160898145 5748280 complement(2972547..2972969) 1 NC_010002.1 PFAM: diacylglycerol kinase; KEGG: pol:Bpro_2312 diacylglycerol kinase; diacylglycerol kinase 2972969 5748280 Daci_2704 Delftia acidovorans SPH-1 diacylglycerol kinase YP_001563727.1 2972547 R 398578 CDS YP_001563728.1 160898146 5748281 complement(2972981..2974654) 1 NC_010002.1 PFAM: sulfatase; protein of unknown function DUF1705; KEGG: xft:PD1689 inner membrane protein; sulfatase 2974654 5748281 Daci_2705 Delftia acidovorans SPH-1 sulfatase YP_001563728.1 2972981 R 398578 CDS YP_001563729.1 160898147 5748282 complement(2974651..2975433) 1 NC_010002.1 KEGG: xcb:XC_3128 hypothetical protein; hypothetical protein 2975433 5748282 Daci_2706 Delftia acidovorans SPH-1 hypothetical protein YP_001563729.1 2974651 R 398578 CDS YP_001563730.1 160898148 5748283 complement(2975420..2976667) 1 NC_010002.1 KEGG: swi:Swit_3710 outer membrane efflux protein; outer membrane efflux protein 2976667 5748283 Daci_2707 Delftia acidovorans SPH-1 outer membrane efflux protein YP_001563730.1 2975420 R 398578 CDS YP_001563731.1 160898149 5748284 complement(2976715..2977035) 1 NC_010002.1 KEGG: azo:azo0269 hypothetical protein; hypothetical protein 2977035 5748284 Daci_2708 Delftia acidovorans SPH-1 hypothetical protein YP_001563731.1 2976715 R 398578 CDS YP_001563732.1 160898150 5748285 complement(2977032..2980127) 1 NC_010002.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: rme:Rmet_3011 heavy metal efflux pump CzcA; CzcA family heavy metal efflux protein 2980127 5748285 Daci_2709 Delftia acidovorans SPH-1 CzcA family heavy metal efflux protein YP_001563732.1 2977032 R 398578 CDS YP_001563733.1 160898151 5748286 complement(2980141..2981364) 1 NC_010002.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: rme:Rmet_3012 secretion protein HlyD; RND family efflux transporter MFP subunit 2981364 5748286 Daci_2710 Delftia acidovorans SPH-1 RND family efflux transporter MFP subunit YP_001563733.1 2980141 R 398578 CDS YP_001563734.1 160898152 5748287 2981675..2982226 1 NC_010002.1 PFAM: cytochrome B561; KEGG: rme:Rmet_3013 cytochrome b561; cytochrome B561 2982226 5748287 Daci_2711 Delftia acidovorans SPH-1 cytochrome B561 YP_001563734.1 2981675 D 398578 CDS YP_001563735.1 160898153 5748288 2982268..2982975 1 NC_010002.1 PFAM: protein of unknown function DUF125 transmembrane; KEGG: rme:Rmet_3014 protein of unknown function DUF125, transmembrane; hypothetical protein 2982975 5748288 Daci_2712 Delftia acidovorans SPH-1 hypothetical protein YP_001563735.1 2982268 D 398578 CDS YP_001563736.1 160898154 5748289 complement(2982989..2984401) 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rme:Rmet_3015 periplasmic sensor signal transduction histidine kinase; histidine kinase 2984401 5748289 Daci_2713 Delftia acidovorans SPH-1 histidine kinase YP_001563736.1 2982989 R 398578 CDS YP_001563737.1 160898155 5748290 complement(2984405..2985070) 1 NC_010002.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rme:Rmet_3016 two component transcriptional regulator, winged helix family; two component transcriptional regulator 2985070 5748290 Daci_2714 Delftia acidovorans SPH-1 two component transcriptional regulator YP_001563737.1 2984405 R 398578 CDS YP_001563738.1 160898156 5748291 complement(2985085..2986428) 1 NC_010002.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; FAD-binding 8 domain protein; Ferric reductase domain protein transmembrane component domain; KEGG: rme:Rmet_3017 ferric reductase-like transmembrane component-like; ferric reductase domain-containing protein 2986428 5748291 Daci_2715 Delftia acidovorans SPH-1 ferric reductase domain-containing protein YP_001563738.1 2985085 R 398578 CDS YP_001563739.1 160898157 5748292 complement(2986644..2989025) 1 NC_010002.1 KEGG: pau:PA14_31070 hypothetical protein; hypothetical protein 2989025 5748292 Daci_2716 Delftia acidovorans SPH-1 hypothetical protein YP_001563739.1 2986644 R 398578 CDS YP_001563740.1 160898158 5748293 complement(2989087..2989674) 1 NC_010002.1 KEGG: rme:Rmet_3020 putative conjugal transfer TRAF transmembrane protein; putative conjugal transfer TRAF transmembrane protein 2989674 5748293 Daci_2717 Delftia acidovorans SPH-1 putative conjugal transfer TRAF transmembrane protein YP_001563740.1 2989087 R 398578 CDS YP_001563741.1 160898159 5748294 complement(2989671..2990195) 1 NC_010002.1 KEGG: rme:Rmet_3021 hypothetical protein; hypothetical protein 2990195 5748294 Daci_2718 Delftia acidovorans SPH-1 hypothetical protein YP_001563741.1 2989671 R 398578 CDS YP_001563742.1 160898160 5748295 complement(2990192..2990455) 1 NC_010002.1 KEGG: rme:Rmet_3022 hypothetical protein; hypothetical protein 2990455 5748295 Daci_2719 Delftia acidovorans SPH-1 hypothetical protein YP_001563742.1 2990192 R 398578 CDS YP_001563743.1 160898161 5748296 complement(2990452..2991090) 1 NC_010002.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: rme:Rmet_3023 cobyrinic acid a,c-diamide synthase; cobyrinic acid ac-diamide synthase 2991090 5748296 Daci_2720 Delftia acidovorans SPH-1 cobyrinic acid ac-diamide synthase YP_001563743.1 2990452 R 398578 CDS YP_001563744.1 160898162 5748297 complement(2991344..2992201) 1 NC_010002.1 KEGG: rme:Rmet_3024 conserved hypothetical replication initiator and transcription repressor protein; putative replication initiator and transcription repressor protein 2992201 5748297 Daci_2721 Delftia acidovorans SPH-1 putative replication initiator and transcription repressor protein YP_001563744.1 2991344 R 398578 CDS YP_001563745.1 160898163 5748298 complement(2992228..2992524) 1 NC_010002.1 KEGG: rme:Rmet_3025 hypothetical protein; hypothetical protein 2992524 5748298 Daci_2722 Delftia acidovorans SPH-1 hypothetical protein YP_001563745.1 2992228 R 398578 CDS YP_001563746.1 160898164 5748299 2992818..2993123 1 NC_010002.1 KEGG: net:Neut_2619 hypothetical protein; hypothetical protein 2993123 5748299 Daci_2723 Delftia acidovorans SPH-1 hypothetical protein YP_001563746.1 2992818 D 398578 CDS YP_001563747.1 160898165 5748300 2993131..2994531 1 NC_010002.1 PFAM: integrase family protein; KEGG: pol:Bpro_1705 phage integrase; integrase family protein 2994531 5748300 Daci_2724 Delftia acidovorans SPH-1 integrase family protein YP_001563747.1 2993131 D 398578 CDS YP_001563748.1 160898166 5748301 2994541..2997150 1 NC_010002.1 PFAM: integrase family protein; KEGG: shn:Shewana3_2916 hypothetical protein; integrase family protein 2997150 5748301 Daci_2725 Delftia acidovorans SPH-1 integrase family protein YP_001563748.1 2994541 D 398578 CDS YP_001563749.1 160898167 5748302 2997147..2997827 1 NC_010002.1 KEGG: pol:Bpro_1703 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 2997827 5748302 Daci_2726 Delftia acidovorans SPH-1 alpha/beta hydrolase fold protein YP_001563749.1 2997147 D 398578 CDS YP_001563750.1 160898168 5748303 complement(2997973..2998737) 1 NC_010002.1 KEGG: rme:Rmet_3026 hypothetical protein; hypothetical protein 2998737 5748303 Daci_2727 Delftia acidovorans SPH-1 hypothetical protein YP_001563750.1 2997973 R 398578 CDS YP_001563751.1 160898169 5748304 complement(2999079..2999426) 1 NC_010002.1 KEGG: rme:Rmet_3027 putative lipoprotein; putative lipoprotein 2999426 5748304 Daci_2728 Delftia acidovorans SPH-1 putative lipoprotein YP_001563751.1 2999079 R 398578 CDS YP_001563752.1 160898170 5748305 2999650..2999943 1 NC_010002.1 PFAM: helix-turn-helix domain protein; KEGG: rme:Rmet_3028 transcriptional regulator, XRE family; helix-turn-helix domain-containing protein 2999943 5748305 Daci_2729 Delftia acidovorans SPH-1 helix-turn-helix domain-containing protein YP_001563752.1 2999650 D 398578 CDS YP_001563753.1 160898171 5748306 complement(3000297..3000611) 1 NC_010002.1 PFAM: protein of unknown function DUF736; KEGG: rme:Rmet_3029 protein of unknown function DUF736; hypothetical protein 3000611 5748306 Daci_2730 Delftia acidovorans SPH-1 hypothetical protein YP_001563753.1 3000297 R 398578 CDS YP_001563754.1 160898172 5748307 3001433..3001951 1 NC_010002.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rme:Rmet_3031 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3001951 5748307 Daci_2731 Delftia acidovorans SPH-1 N-acetyltransferase GCN5 YP_001563754.1 3001433 D 398578 CDS YP_001563755.1 160898173 5748308 complement(3002082..3002357) 1 NC_010002.1 KEGG: rme:Rmet_3032 hypothetical protein; hypothetical protein 3002357 5748308 Daci_2732 Delftia acidovorans SPH-1 hypothetical protein YP_001563755.1 3002082 R 398578 CDS YP_001563756.1 160898174 5748309 complement(3002354..3004420) 1 NC_010002.1 PFAM: ParB domain protein nuclease; KEGG: rme:Rmet_3033 ParB-like nuclease; nuclease 3004420 5748309 Daci_2733 Delftia acidovorans SPH-1 nuclease YP_001563756.1 3002354 R 398578 CDS YP_001563757.1 160898175 5748310 complement(3004496..3005323) 1 NC_010002.1 PFAM: protein of unknown function DUF932; KEGG: rme:Rmet_3034 protein of unknown function DUF932; hypothetical protein 3005323 5748310 Daci_2734 Delftia acidovorans SPH-1 hypothetical protein YP_001563757.1 3004496 R 398578 CDS YP_001563758.1 160898176 5748311 3005848..3006111 1 NC_010002.1 hypothetical protein 3006111 5748311 Daci_2735 Delftia acidovorans SPH-1 hypothetical protein YP_001563758.1 3005848 D 398578 CDS YP_001563759.1 160898177 5748312 3006259..3006558 1 NC_010002.1 KEGG: rme:Rmet_3036 hypothetical protein; hypothetical protein 3006558 5748312 Daci_2736 Delftia acidovorans SPH-1 hypothetical protein YP_001563759.1 3006259 D 398578 CDS YP_001563760.1 160898178 5748313 complement(3006701..3006979) 1 NC_010002.1 KEGG: rme:Rmet_3037 hypothetical protein; hypothetical protein 3006979 5748313 Daci_2737 Delftia acidovorans SPH-1 hypothetical protein YP_001563760.1 3006701 R 398578 CDS YP_001563761.1 160898179 5748314 complement(3007043..3007393) 1 NC_010002.1 KEGG: rme:Rmet_3038 hypothetical protein; hypothetical protein 3007393 5748314 Daci_2738 Delftia acidovorans SPH-1 hypothetical protein YP_001563761.1 3007043 R 398578 CDS YP_001563762.1 160898180 5748315 complement(3007770..3008885) 1 NC_010002.1 KEGG: rme:Rmet_3039 beta-lactamase-like protein; hypothetical protein 3008885 5748315 Daci_2739 Delftia acidovorans SPH-1 hypothetical protein YP_001563762.1 3007770 R 398578 CDS YP_001563763.1 160898181 5748316 complement(3008886..3011141) 1 NC_010002.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: rme:Rmet_3040 UBA/ThiF-type NAD/FAD binding fold; UBA/THIF-type NAD/FAD-binding protein 3011141 5748316 Daci_2740 Delftia acidovorans SPH-1 UBA/THIF-type NAD/FAD-binding protein YP_001563763.1 3008886 R 398578 CDS YP_001563764.1 160898182 5748317 complement(3011138..3012331) 1 NC_010002.1 KEGG: rme:Rmet_3041 hypothetical protein; hypothetical protein 3012331 5748317 Daci_2741 Delftia acidovorans SPH-1 hypothetical protein YP_001563764.1 3011138 R 398578 CDS YP_001563765.1 160898183 5748318 3012421..3013323 1 NC_010002.1 KEGG: rme:Rmet_3042 hypothetical protein; hypothetical protein 3013323 5748318 Daci_2742 Delftia acidovorans SPH-1 hypothetical protein YP_001563765.1 3012421 D 398578 CDS YP_001563766.1 160898184 5748319 3013330..3014118 1 NC_010002.1 KEGG: rme:Rmet_3043 hypothetical protein; hypothetical protein 3014118 5748319 Daci_2743 Delftia acidovorans SPH-1 hypothetical protein YP_001563766.1 3013330 D 398578 CDS YP_001563767.1 160898185 5748320 complement(3014164..3015300) 1 NC_010002.1 PFAM: protein of unknown function DUF1016; KEGG: rme:Rmet_3044 protein of unknown function DUF1016; hypothetical protein 3015300 5748320 Daci_2744 Delftia acidovorans SPH-1 hypothetical protein YP_001563767.1 3014164 R 398578 CDS YP_001563768.1 160898186 5748321 complement(3015297..3016544) 1 NC_010002.1 PFAM: integrase family protein; KEGG: rme:Rmet_3045 phage integrase; integrase family protein 3016544 5748321 Daci_2745 Delftia acidovorans SPH-1 integrase family protein YP_001563768.1 3015297 R 398578 CDS YP_001563769.1 160898187 5748322 complement(3016730..3017338) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_1066 uncharacterized protein UPF0114; hypothetical protein 3017338 5748322 Daci_2746 Delftia acidovorans SPH-1 hypothetical protein YP_001563769.1 3016730 R 398578 CDS YP_001563770.1 160898188 5748323 3017570..3019570 1 NC_010002.1 TIGRFAM: acetate--CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_1067 acetate--CoA ligase; acetate--CoA ligase 3019570 5748323 Daci_2747 Delftia acidovorans SPH-1 acetate--CoA ligase YP_001563770.1 3017570 D 398578 CDS YP_001563771.1 160898189 5748324 3019746..3020228 1 NC_010002.1 KEGG: aav:Aave_1500 hypothetical protein; hypothetical protein 3020228 5748324 Daci_2748 Delftia acidovorans SPH-1 hypothetical protein YP_001563771.1 3019746 D 398578 CDS YP_001563772.1 160898190 5748325 complement(3020330..3020638) 1 NC_010002.1 PFAM: cytochrome c class I; KEGG: aav:Aave_1504 cytochrome c, class I; class I cytochrome c 3020638 5748325 Daci_2749 Delftia acidovorans SPH-1 class I cytochrome c YP_001563772.1 3020330 R 398578 CDS YP_001563773.1 160898191 5748326 3020742..3020984 1 NC_010002.1 KEGG: aav:Aave_1505 hypothetical protein; hypothetical protein 3020984 5748326 Daci_2750 Delftia acidovorans SPH-1 hypothetical protein YP_001563773.1 3020742 D 398578 CDS YP_001563774.1 160898192 5748327 complement(3020986..3022428) 1 NC_010002.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rme:Rmet_5328 RND efflux system, outer membrane lipoprotein, NodT; RND efflux system outer membrane lipoprotein 3022428 5748327 Daci_2751 Delftia acidovorans SPH-1 RND efflux system outer membrane lipoprotein YP_001563774.1 3020986 R 398578 CDS YP_001563775.1 160898193 5748328 complement(3022415..3025606) 1 NC_010002.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: rme:Rmet_5319 heavy metal efflux pump CzcA; CzcA family heavy metal efflux protein 3025606 5748328 Daci_2752 Delftia acidovorans SPH-1 CzcA family heavy metal efflux protein YP_001563775.1 3022415 R 398578 CDS YP_001563776.1 160898194 5748329 complement(3025617..3026867) 1 NC_010002.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bbt:BBta_1545 putative heavy metal efflux pump, HlyD family; RND family efflux transporter MFP subunit 3026867 5748329 Daci_2753 Delftia acidovorans SPH-1 RND family efflux transporter MFP subunit YP_001563776.1 3025617 R 398578 CDS YP_001563777.1 160898195 5748330 complement(3026956..3028431) 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; KEGG: rso:RSc0549 probable transmembrane sensor histidine kinase transcription regulator protein; histidine kinase 3028431 5748330 Daci_2754 Delftia acidovorans SPH-1 histidine kinase YP_001563777.1 3026956 R 398578 CDS YP_001563778.1 160898196 5748331 complement(3028428..3029093) 1 NC_010002.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: azo:azo0975 probable two-component response regulatory protein; two component transcriptional regulator 3029093 5748331 Daci_2755 Delftia acidovorans SPH-1 two component transcriptional regulator YP_001563778.1 3028428 R 398578 CDS YP_001563779.1 160898197 5748332 3029184..3031124 1 NC_010002.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 3031124 5748332 Daci_2756 Delftia acidovorans SPH-1 dihydroxy-acid dehydratase YP_001563779.1 3029184 D 398578 CDS YP_001563780.1 160898198 5748333 complement(3031478..3031954) 1 NC_010002.1 TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein; KEGG: ajs:Ajs_1074 bacterioferritin; bacterioferritin 3031954 5748333 Daci_2757 Delftia acidovorans SPH-1 bacterioferritin YP_001563780.1 3031478 R 398578 CDS YP_001563781.1 160898199 5748334 3032218..3033057 1 NC_010002.1 catalyzes the conversion of feruloyl-CoA to vanillin and acetyl-CoA; p-hydroxycinnamoyl CoA hydratase/lyase 3033057 5748334 Daci_2758 Delftia acidovorans SPH-1 p-hydroxycinnamoyl CoA hydratase/lyase YP_001563781.1 3032218 D 398578 CDS YP_001563782.1 160898200 5748335 3033128..3035317 1 NC_010002.1 PFAM: CoA-binding domain protein; KEGG: nar:Saro_0674 CoA-binding protein; CoA-binding domain-containing protein 3035317 5748335 Daci_2759 Delftia acidovorans SPH-1 CoA-binding domain-containing protein YP_001563782.1 3033128 D 398578 CDS YP_001563783.1 160898201 5748336 3035424..3036794 1 NC_010002.1 PFAM: major facilitator superfamily MFS_1; KEGG: swi:Swit_0918 major facilitator superfamily MFS_1; major facilitator transporter 3036794 5748336 Daci_2760 Delftia acidovorans SPH-1 major facilitator transporter YP_001563783.1 3035424 D 398578 CDS YP_001563784.1 160898202 5748337 3036791..3038581 1 NC_010002.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ppf:Pput_2404 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 3038581 5748337 Daci_2761 Delftia acidovorans SPH-1 acyl-CoA dehydrogenase domain-containing protein YP_001563784.1 3036791 D 398578 CDS YP_001563785.1 160898203 5748338 3038601..3039155 1 NC_010002.1 PFAM: regulatory protein MarR; KEGG: xcv:XCV0364 transcriptional regulator, MarR family; MarR family transcriptional regulator 3039155 5748338 Daci_2762 Delftia acidovorans SPH-1 MarR family transcriptional regulator YP_001563785.1 3038601 D 398578 CDS YP_001563786.1 160898204 5748339 3039199..3040062 1 NC_010002.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 3040062 5748339 Daci_2763 Delftia acidovorans SPH-1 prolipoprotein diacylglyceryl transferase YP_001563786.1 3039199 D 398578 CDS YP_001563787.1 160898205 5748340 3040291..3041736 1 NC_010002.1 PFAM: Malonyl-CoA decarboxylase; KEGG: ajs:Ajs_1077 malonyl-CoA decarboxylase; malonyl-CoA decarboxylase 3041736 5748340 Daci_2764 Delftia acidovorans SPH-1 malonyl-CoA decarboxylase YP_001563787.1 3040291 D 398578 CDS YP_001563788.1 160898206 5748341 3041833..3042831 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: aav:Aave_1513 uncharacterized protein UPF0065; hypothetical protein 3042831 5748341 Daci_2765 Delftia acidovorans SPH-1 hypothetical protein YP_001563788.1 3041833 D 398578 CDS YP_001563789.1 160898207 5748342 3042959..3044113 1 NC_010002.1 KEGG: vei:Veis_0487 hypothetical protein; hypothetical protein 3044113 5748342 Daci_2766 Delftia acidovorans SPH-1 hypothetical protein YP_001563789.1 3042959 D 398578 CDS YP_001563790.1 160898208 5748343 complement(3044126..3044821) 1 NC_010002.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: reu:Reut_C5947 regulatory protein GntR, HTH:GntR, C-terminal; GntR family transcriptional regulator 3044821 5748343 Daci_2767 Delftia acidovorans SPH-1 GntR family transcriptional regulator YP_001563790.1 3044126 R 398578 CDS YP_001563791.1 160898209 5748344 3044882..3045631 1 NC_010002.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: vei:Veis_1256 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 3045631 5748344 Daci_2768 Delftia acidovorans SPH-1 enoyl-CoA hydratase/isomerase YP_001563791.1 3044882 D 398578 CDS YP_001563792.1 160898210 5748345 3045814..3046782 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: vei:Veis_1257 uncharacterized protein UPF0065; hypothetical protein 3046782 5748345 Daci_2769 Delftia acidovorans SPH-1 hypothetical protein YP_001563792.1 3045814 D 398578 CDS YP_001563793.1 160898211 5748346 3046901..3048133 1 NC_010002.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: vei:Veis_1258 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 3048133 5748346 Daci_2770 Delftia acidovorans SPH-1 L-carnitine dehydratase/bile acid-inducible protein F YP_001563793.1 3046901 D 398578 CDS YP_001563794.1 160898212 5748347 3048120..3049730 1 NC_010002.1 catalyzes the formation of malonyl-CoA from malonate and CoA; malonyl-CoA synthase 3049730 5748347 Daci_2771 Delftia acidovorans SPH-1 malonyl-CoA synthase YP_001563794.1 3048120 D 398578 CDS YP_001563795.1 160898213 5748348 complement(3049839..3050282) 1 NC_010002.1 PFAM: UspA domain protein; KEGG: vei:Veis_1173 UspA domain protein; UspA domain-containing protein 3050282 5748348 Daci_2772 Delftia acidovorans SPH-1 UspA domain-containing protein YP_001563795.1 3049839 R 398578 CDS YP_001563796.1 160898214 5748349 3050357..3052831 1 NC_010002.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: ajs:Ajs_1082 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase 3052831 5748349 Daci_2773 Delftia acidovorans SPH-1 heavy metal translocating P-type ATPase YP_001563796.1 3050357 D 398578 CDS YP_001563797.1 160898215 5748350 3052972..3053139 1 NC_010002.1 TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type; KEGG: ajs:Ajs_1083 cytochrome oxidase maturation protein, cbb3-type; cbb3-type cytochrome oxidase maturation protein 3053139 5748350 Daci_2774 Delftia acidovorans SPH-1 cbb3-type cytochrome oxidase maturation protein YP_001563797.1 3052972 D 398578 CDS YP_001563798.1 160898216 5748351 3053203..3054639 1 NC_010002.1 CcoN; FixN; cbb3-type cytochrome c oxidase subunit I 3054639 5748351 Daci_2775 Delftia acidovorans SPH-1 cbb3-type cytochrome c oxidase subunit I YP_001563798.1 3053203 D 398578 CDS YP_001563799.1 160898217 5748352 3054659..3055291 1 NC_010002.1 CcoO; FixO; cbb3-type cytochrome c oxidase subunit II 3055291 5748352 Daci_2776 Delftia acidovorans SPH-1 cbb3-type cytochrome c oxidase subunit II YP_001563799.1 3054659 D 398578 CDS YP_001563800.1 160898218 5748353 3055303..3055440 1 NC_010002.1 PFAM: Cbb3-type cytochrome oxidase component; KEGG: ajs:Ajs_1086 Cbb3-type cytochrome oxidase component; cbb3-type cytochrome oxidase subunit 3055440 5748353 Daci_2777 Delftia acidovorans SPH-1 cbb3-type cytochrome oxidase subunit YP_001563800.1 3055303 D 398578 CDS YP_001563801.1 160898219 5748354 3055468..3056385 1 NC_010002.1 TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; PFAM: cytochrome c class I; KEGG: aav:Aave_1526 cytochrome c oxidase, cbb3-type, subunit III; cytochrome c oxidase, cbb3-type subunit III 3056385 5748354 Daci_2778 Delftia acidovorans SPH-1 cytochrome c oxidase, cbb3-type subunit III YP_001563801.1 3055468 D 398578 CDS YP_001563802.1 160898220 5748355 3056463..3057917 1 NC_010002.1 TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: ajs:Ajs_1088 4Fe-4S ferredoxin, iron-sulfur binding domain protein; cytochrome c oxidase accessory protein CcoG 3057917 5748355 Daci_2779 Delftia acidovorans SPH-1 cytochrome c oxidase accessory protein CcoG YP_001563802.1 3056463 D 398578 CDS YP_001563803.1 160898221 5748356 3057975..3058289 1 NC_010002.1 KEGG: aav:Aave_1528 hypothetical protein; hypothetical protein 3058289 5748356 Daci_2780 Delftia acidovorans SPH-1 hypothetical protein YP_001563803.1 3057975 D 398578 CDS YP_001563804.1 160898222 5748357 3058469..3058762 1 NC_010002.1 KEGG: rfr:Rfer_1936 hypothetical protein; hypothetical protein 3058762 5748357 Daci_2781 Delftia acidovorans SPH-1 hypothetical protein YP_001563804.1 3058469 D 398578 CDS YP_001563805.1 160898223 5748358 complement(3058844..3059632) 1 NC_010002.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: ajs:Ajs_1091 putative transcriptional regulator, Crp/Fnr family; Crp/FNR family transcriptional regulator 3059632 5748358 Daci_2782 Delftia acidovorans SPH-1 Crp/FNR family transcriptional regulator YP_001563805.1 3058844 R 398578 CDS YP_001563806.1 160898224 5748359 3059726..3061108 1 NC_010002.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 3061108 5748359 Daci_2783 Delftia acidovorans SPH-1 coproporphyrinogen III oxidase YP_001563806.1 3059726 D 398578 CDS YP_001563807.1 160898225 5748360 3061114..3061830 1 NC_010002.1 KEGG: aav:Aave_1532 hypothetical protein; hypothetical protein 3061830 5748360 Daci_2784 Delftia acidovorans SPH-1 hypothetical protein YP_001563807.1 3061114 D 398578 CDS YP_001563808.1 160898226 5748361 3061900..3063246 1 NC_010002.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: aav:Aave_1533 metal dependent phosphohydrolase; metal dependent phosphohydrolase 3063246 5748361 Daci_2785 Delftia acidovorans SPH-1 metal dependent phosphohydrolase YP_001563808.1 3061900 D 398578 CDS YP_001563809.1 160898227 5748362 3063243..3065729 1 NC_010002.1 KEGG: rfr:Rfer_2629 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 3065729 5748362 Daci_2786 Delftia acidovorans SPH-1 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_001563809.1 3063243 D 398578 CDS YP_001563810.1 160898228 5748363 complement(3065693..3066511) 1 NC_010002.1 PFAM: protein of unknown function DUF81; KEGG: rfr:Rfer_2628 protein of unknown function DUF81; hypothetical protein 3066511 5748363 Daci_2787 Delftia acidovorans SPH-1 hypothetical protein YP_001563810.1 3065693 R 398578 CDS YP_001563811.1 160898229 5748364 complement(3066902..3067303) 1 NC_010002.1 PFAM: protein of unknown function DUF710; KEGG: ajs:Ajs_1094 protein of unknown function DUF710; hypothetical protein 3067303 5748364 Daci_2788 Delftia acidovorans SPH-1 hypothetical protein YP_001563811.1 3066902 R 398578 CDS YP_001563812.1 160898230 5748365 complement(3067337..3067546) 1 NC_010002.1 KEGG: pol:Bpro_2787 hypothetical protein; hypothetical protein 3067546 5748365 Daci_2789 Delftia acidovorans SPH-1 hypothetical protein YP_001563812.1 3067337 R 398578 CDS YP_001563813.1 160898231 5748366 3067736..3069274 1 NC_010002.1 PFAM: Cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: ajs:Ajs_1097 CobB/CobQ domain protein glutamine amidotransferase; glutamine amidotransferase 3069274 5748366 Daci_2790 Delftia acidovorans SPH-1 glutamine amidotransferase YP_001563813.1 3067736 D 398578 CDS YP_001563814.1 160898232 5748367 3069271..3069864 1 NC_010002.1 PFAM: cobalbumin biosynthesis protein; KEGG: ajs:Ajs_1098 cobalbumin biosynthesis enzyme; cobalbumin biosynthesis protein 3069864 5748367 Daci_2791 Delftia acidovorans SPH-1 cobalbumin biosynthesis protein YP_001563814.1 3069271 D 398578 CDS YP_001563815.1 160898233 5748368 3069861..3070739 1 NC_010002.1 PFAM: periplasmic binding protein; KEGG: pol:Bpro_2782 periplasmic binding protein; periplasmic-binding protein 3070739 5748368 Daci_2792 Delftia acidovorans SPH-1 periplasmic-binding protein YP_001563815.1 3069861 D 398578 CDS YP_001563816.1 160898234 5748369 3070781..3071764 1 NC_010002.1 PFAM: transport system permease protein; KEGG: pol:Bpro_2781 transport system permease protein; transport system permease 3071764 5748369 Daci_2793 Delftia acidovorans SPH-1 transport system permease YP_001563816.1 3070781 D 398578 CDS YP_001563817.1 160898235 5748370 3071761..3072564 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pna:Pnap_2362 ABC transporter related; ABC transporter-like protein 3072564 5748370 Daci_2794 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001563817.1 3071761 D 398578 CDS YP_001563818.1 160898236 5748371 3072581..3073378 1 NC_010002.1 PFAM: aminoglycoside/hydroxyurea antibiotic resistance kinase; KEGG: mms:mma_1889 streptomycin phosphotransferase; 3''-kinase 3073378 5748371 Daci_2795 Delftia acidovorans SPH-1 3''-kinase YP_001563818.1 3072581 D 398578 CDS YP_001563819.1 160898237 5748372 complement(3073375..3074253) 1 NC_010002.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: rme:Rmet_0343 transcriptional regulator, RpiR family; RpiR family transcriptional regulator 3074253 5748372 Daci_2796 Delftia acidovorans SPH-1 RpiR family transcriptional regulator YP_001563819.1 3073375 R 398578 CDS YP_001563820.1 160898238 5748373 3074414..3075757 1 NC_010002.1 PFAM: aminotransferase class-III; KEGG: vei:Veis_1705 aminotransferase class-III; hypothetical protein 3075757 5748373 Daci_2797 Delftia acidovorans SPH-1 hypothetical protein YP_001563820.1 3074414 D 398578 CDS YP_001563821.1 160898239 5748374 3075829..3076746 1 NC_010002.1 PFAM: extracellular solute-binding protein family 3; KEGG: azo:azo0442 putative glutamine-binding protein; extracellular solute-binding protein 3076746 5748374 Daci_2798 Delftia acidovorans SPH-1 extracellular solute-binding protein YP_001563821.1 3075829 D 398578 CDS YP_001563822.1 160898240 5748375 3076872..3077117 1 NC_010002.1 KEGG: mbb:BCG_0315A hypothetical protein, antitoxin; antitoxin 3077117 5748375 Daci_2799 Delftia acidovorans SPH-1 antitoxin YP_001563822.1 3076872 D 398578 CDS YP_001563823.1 160898241 5748376 3077114..3077551 1 NC_010002.1 TIGRFAM: PIN domain protein family protein; KEGG: mtu:Rv0277c hypothetical protein; PilT domain-containing protein 3077551 5748376 Daci_2800 Delftia acidovorans SPH-1 PilT domain-containing protein YP_001563823.1 3077114 D 398578 CDS YP_001563824.1 160898242 5748377 3077581..3078237 1 NC_010002.1 KEGG: rfr:Rfer_1038 Asp/Glu racemase; Asp/Glu racemase 3078237 5748377 Daci_2801 Delftia acidovorans SPH-1 Asp/Glu racemase YP_001563824.1 3077581 D 398578 CDS YP_001563825.1 160898243 5748378 3078301..3078870 1 NC_010002.1 KEGG: rfr:Rfer_2618 cob(I)alamin adenosyltransferase; TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; cob(I)alamin adenosyltransferase 3078870 5748378 Daci_2802 Delftia acidovorans SPH-1 cob(I)alamin adenosyltransferase YP_001563825.1 3078301 D 398578 CDS YP_001563826.1 160898244 5748379 3078910..3079617 1 NC_010002.1 TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase; KEGG: pol:Bpro_2763 cob(II)yrinic acid a,c-diamide reductase; cob(II)yrinic acid a,c-diamide reductase 3079617 5748379 Daci_2803 Delftia acidovorans SPH-1 cob(II)yrinic acid a,c-diamide reductase YP_001563826.1 3078910 D 398578 CDS YP_001563827.1 160898245 5748380 3079614..3080708 1 NC_010002.1 TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; KEGG: ajs:Ajs_3180 cobalamin biosynthesis protein CobD; cobalamin biosynthesis protein CobD 3080708 5748380 Daci_2804 Delftia acidovorans SPH-1 cobalamin biosynthesis protein CobD YP_001563827.1 3079614 D 398578 CDS YP_001563828.1 160898246 5748381 3080705..3081748 1 NC_010002.1 PFAM: aminotransferase class I and II; KEGG: ajs:Ajs_3179 aminotransferase, class I and II; class I/II aminotransferase 3081748 5748381 Daci_2805 Delftia acidovorans SPH-1 class I/II aminotransferase YP_001563828.1 3080705 D 398578 CDS YP_001563829.1 160898247 5748382 3081735..3083240 1 NC_010002.1 TIGRFAM: cobyric acid synthase CobQ; PFAM: Cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: aav:Aave_1552 cobyric acid synthase CobQ; cobyric acid synthase CobQ 3083240 5748382 Daci_2806 Delftia acidovorans SPH-1 cobyric acid synthase CobQ YP_001563829.1 3081735 D 398578 CDS YP_001563830.1 160898248 5748383 3083384..3083815 1 NC_010002.1 KEGG: aav:Aave_0439 hypothetical protein; hypothetical protein 3083815 5748383 Daci_2807 Delftia acidovorans SPH-1 hypothetical protein YP_001563830.1 3083384 D 398578 CDS YP_001563831.1 160898249 5748384 3084101..3084472 1 NC_010002.1 KEGG: aav:Aave_3896 hypothetical protein; hypothetical protein 3084472 5748384 Daci_2808 Delftia acidovorans SPH-1 hypothetical protein YP_001563831.1 3084101 D 398578 CDS YP_001563832.1 160898250 5748385 complement(3084562..3085359) 1 NC_010002.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: vei:Veis_2462 hydroxypyruvate isomerase; hydroxypyruvate isomerase 3085359 5748385 Daci_2809 Delftia acidovorans SPH-1 hydroxypyruvate isomerase YP_001563832.1 3084562 R 398578 CDS YP_001563833.1 160898251 5748386 complement(3085395..3086678) 1 NC_010002.1 PFAM: type III effector Hrp-dependent outers; KEGG: pol:Bpro_4878 type III effector Hrp-dependent outers; Hrp-dependent type III effector protein 3086678 5748386 Daci_2810 Delftia acidovorans SPH-1 Hrp-dependent type III effector protein YP_001563833.1 3085395 R 398578 CDS YP_001563834.1 160898252 5748387 complement(3086675..3087619) 1 NC_010002.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: rfr:Rfer_0446 3-hydroxyisobutyrate dehydrogenase; 3-hydroxyisobutyrate dehydrogenase 3087619 5748387 Daci_2811 Delftia acidovorans SPH-1 3-hydroxyisobutyrate dehydrogenase YP_001563834.1 3086675 R 398578 CDS YP_001563835.1 160898253 5748388 complement(3087616..3088596) 1 NC_010002.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KR domain protein; KEGG: bur:Bcep18194_B0473 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 3088596 5748388 Daci_2812 Delftia acidovorans SPH-1 NAD-dependent epimerase/dehydratase YP_001563835.1 3087616 R 398578 CDS YP_001563836.1 160898254 5748389 complement(3088640..3089971) 1 NC_010002.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B0475 major facilitator superfamily (MFS_1) transporter; major facilitator transporter 3089971 5748389 Daci_2813 Delftia acidovorans SPH-1 major facilitator transporter YP_001563836.1 3088640 R 398578 CDS YP_001563837.1 160898255 5748390 complement(3090086..3090724) 1 NC_010002.1 PFAM: class II aldolase/adducin family protein; KEGG: bxe:Bxe_B2170 putative L-fuculose phosphate aldolase; putative aldolase 3090724 5748390 Daci_2814 Delftia acidovorans SPH-1 putative aldolase YP_001563837.1 3090086 R 398578 CDS YP_001563838.1 160898256 5748391 complement(3090871..3091665) 1 NC_010002.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: rfr:Rfer_0447 GntR-like; GntR family transcriptional regulator 3091665 5748391 Daci_2815 Delftia acidovorans SPH-1 GntR family transcriptional regulator YP_001563838.1 3090871 R 398578 CDS YP_001563839.1 160898257 5748392 3091758..3093002 1 NC_010002.1 KEGG: ajs:Ajs_3176 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 3093002 5748392 Daci_2816 Delftia acidovorans SPH-1 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_001563839.1 3091758 D 398578 CDS YP_001563840.1 160898258 5748393 complement(3093023..3094486) 1 NC_010002.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bbr:BB2428 putative GntR-family transcriptional regulator; transcriptional regulator 3094486 5748393 Daci_2817 Delftia acidovorans SPH-1 transcriptional regulator YP_001563840.1 3093023 R 398578 CDS YP_001563841.1 160898259 5748394 3094592..3095338 1 NC_010002.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bch:Bcen2424_4519 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3095338 5748394 Daci_2818 Delftia acidovorans SPH-1 N-acetyltransferase GCN5 YP_001563841.1 3094592 D 398578 CDS YP_001563842.1 160898260 5748395 complement(3095314..3096228) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pol:Bpro_0586 transcriptional regulator, LysR family; LysR family transcriptional regulator 3096228 5748395 Daci_2819 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001563842.1 3095314 R 398578 CDS YP_001563843.1 160898261 5748396 3096291..3097370 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: pol:Bpro_0585 uncharacterized protein UPF0065; hypothetical protein 3097370 5748396 Daci_2820 Delftia acidovorans SPH-1 hypothetical protein YP_001563843.1 3096291 D 398578 CDS YP_001563844.1 160898262 5748397 complement(3097380..3098267) 1 NC_010002.1 PFAM: regulatory protein LuxR; KEGG: pau:PA14_10980 hypothetical protein; LuxR family transcriptional regulator 3098267 5748397 Daci_2821 Delftia acidovorans SPH-1 LuxR family transcriptional regulator YP_001563844.1 3097380 R 398578 CDS YP_001563845.1 160898263 5748398 3098374..3098862 1 NC_010002.1 KEGG: rha:RHA1_ro05126 hypothetical protein; hypothetical protein 3098862 5748398 Daci_2822 Delftia acidovorans SPH-1 hypothetical protein YP_001563845.1 3098374 D 398578 CDS YP_001563846.1 160898264 5748399 3098910..3099917 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: rme:Rmet_3983 uncharacterized protein UPF0065; hypothetical protein 3099917 5748399 Daci_2823 Delftia acidovorans SPH-1 hypothetical protein YP_001563846.1 3098910 D 398578 CDS YP_001563847.1 160898265 5748400 complement(3099921..3100673) 1 NC_010002.1 KEGG: aav:Aave_1562 endonuclease III; TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; SMART: iron-sulfur cluster loop; endonuclease III 3100673 5748400 Daci_2824 Delftia acidovorans SPH-1 endonuclease III YP_001563847.1 3099921 R 398578 CDS YP_001563848.1 160898266 5748401 3100808..3101881 1 NC_010002.1 PFAM: protein of unknown function DUF1016; KEGG: bur:Bcep18194_B0261 protein of unknown function DUF1016; hypothetical protein 3101881 5748401 Daci_2825 Delftia acidovorans SPH-1 hypothetical protein YP_001563848.1 3100808 D 398578 CDS YP_001563849.1 160898267 5748402 complement(3101947..3102855) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_B2306 transcriptional regulator, LysR-family; LysR family transcriptional regulator 3102855 5748402 Daci_2826 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001563849.1 3101947 R 398578 CDS YP_001563850.1 160898268 5748403 3102971..3104458 1 NC_010002.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 3104458 5748403 Daci_2827 Delftia acidovorans SPH-1 amidase YP_001563850.1 3102971 D 398578 CDS YP_001563851.1 160898269 5748404 3104518..3105504 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: reh:H16_B2308 probable extra-cytoplasmic solute receptor; hypothetical protein 3105504 5748404 Daci_2828 Delftia acidovorans SPH-1 hypothetical protein YP_001563851.1 3104518 D 398578 CDS YP_001563852.1 160898270 5748405 3105642..3106838 1 NC_010002.1 PFAM: aminotransferase class I and II; KEGG: ajs:Ajs_3169 putative transcriptional regulator, GntR family; GntR family transcriptional regulator 3106838 5748405 Daci_2829 Delftia acidovorans SPH-1 GntR family transcriptional regulator YP_001563852.1 3105642 D 398578 CDS YP_001563853.1 160898271 5748406 3106835..3107092 1 NC_010002.1 PFAM: SlyX family protein; KEGG: ajs:Ajs_3168 SlyX family protein; SlyX family protein 3107092 5748406 Daci_2830 Delftia acidovorans SPH-1 SlyX family protein YP_001563853.1 3106835 D 398578 CDS YP_001563854.1 160898272 5748407 complement(3107148..3107282) 1 NC_010002.1 hypothetical protein 3107282 5748407 Daci_2831 Delftia acidovorans SPH-1 hypothetical protein YP_001563854.1 3107148 R 398578 CDS YP_001563855.1 160898273 5748408 complement(3107491..3108918) 1 NC_010002.1 TIGRFAM: amidohydrolase; PFAM: peptidase dimerisation domain protein; KEGG: bur:Bcep18194_C6529 peptidase M20D, amidohydrolase; amidohydrolase 3108918 5748408 Daci_2832 Delftia acidovorans SPH-1 amidohydrolase YP_001563855.1 3107491 R 398578 CDS YP_001563856.1 160898274 5748409 complement(3108915..3109943) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: reh:H16_A3650 probable extra-cytoplasmic solute receptor; hypothetical protein 3109943 5748409 Daci_2833 Delftia acidovorans SPH-1 hypothetical protein YP_001563856.1 3108915 R 398578 CDS YP_001563857.1 160898275 5748410 3110134..3111123 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_A3224 transcriptional regulator, LysR-family; LysR family transcriptional regulator 3111123 5748410 Daci_2834 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001563857.1 3110134 D 398578 CDS YP_001563858.1 160898276 5748411 3111240..3111788 1 NC_010002.1 KEGG: vei:Veis_4884 hypothetical protein; hypothetical protein 3111788 5748411 Daci_2835 Delftia acidovorans SPH-1 hypothetical protein YP_001563858.1 3111240 D 398578 CDS YP_001563859.1 160898277 5748412 complement(3111838..3112743) 1 NC_010002.1 specific inhibitor of chromosomal initiation of replication in vitro; inds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; chromosome replication initiation inhibitor protein 3112743 5748412 Daci_2836 Delftia acidovorans SPH-1 chromosome replication initiation inhibitor protein YP_001563859.1 3111838 R 398578 CDS YP_001563860.1 160898278 5748413 3112814..3113464 1 NC_010002.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: ajs:Ajs_3161 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA 3113464 5748413 Daci_2837 Delftia acidovorans SPH-1 lysine exporter protein LysE/YggA YP_001563860.1 3112814 D 398578 CDS YP_001563861.1 160898279 5748414 complement(3113474..3113785) 1 NC_010002.1 hypothetical protein 3113785 5748414 Daci_2838 Delftia acidovorans SPH-1 hypothetical protein YP_001563861.1 3113474 R 398578 CDS YP_001563862.1 160898280 5748415 complement(3113816..3114394) 1 NC_010002.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: mlo:mll7935 transcriptional regulator; AsnC family transcriptional regulator 3114394 5748415 Daci_2839 Delftia acidovorans SPH-1 AsnC family transcriptional regulator YP_001563862.1 3113816 R 398578 CDS YP_001563863.1 160898281 5748416 3114421..3115323 1 NC_010002.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: pna:Pnap_4738 protein of unknown function DUF6, transmembrane; hypothetical protein 3115323 5748416 Daci_2840 Delftia acidovorans SPH-1 hypothetical protein YP_001563863.1 3114421 D 398578 CDS YP_001563864.1 160898282 5748417 complement(3115421..3116206) 1 NC_010002.1 TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: ajs:Ajs_3160 lipoprotein, YaeC family; YaeC family lipoprotein 3116206 5748417 Daci_2841 Delftia acidovorans SPH-1 YaeC family lipoprotein YP_001563864.1 3115421 R 398578 CDS YP_001563865.1 160898283 5748418 3116331..3116621 1 NC_010002.1 KEGG: tcx:Tcr_1006 hypothetical protein; hypothetical protein 3116621 5748418 Daci_2842 Delftia acidovorans SPH-1 hypothetical protein YP_001563865.1 3116331 D 398578 CDS YP_001563866.1 160898284 5748419 complement(3116660..3118000) 1 NC_010002.1 PFAM: aminotransferase class V; regulatory protein GntR HTH; aminotransferase class I and II; KEGG: pfl:PFL_2406 transcriptional regulator, GntR family/aminotransferase, classes I and II family protein; transcriptional regulator 3118000 5748419 Daci_2843 Delftia acidovorans SPH-1 transcriptional regulator YP_001563866.1 3116660 R 398578 CDS YP_001563867.1 160898285 5748420 3118103..3118588 1 NC_010002.1 PFAM: thioesterase superfamily protein; KEGG: mms:mma_1704 hypothetical protein; thioesterase superfamily protein 3118588 5748420 Daci_2844 Delftia acidovorans SPH-1 thioesterase superfamily protein YP_001563867.1 3118103 D 398578 CDS YP_001563868.1 160898286 5748421 complement(3118653..3119441) 1 NC_010002.1 KEGG: lma:LmjF35.0290 hypothetical protein, conserved; hypothetical protein 3119441 5748421 Daci_2845 Delftia acidovorans SPH-1 hypothetical protein YP_001563868.1 3118653 R 398578 CDS YP_001563869.1 160898287 5748422 complement(3119500..3120213) 1 NC_010002.1 KEGG: aav:Aave_1576 phosphoserine phosphatase SerB; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase subfamily IB hypothetical 1; Haloacid dehalogenase domain protein hydrolase type 3; phosphoserine phosphatase SerB 3120213 5748422 Daci_2846 Delftia acidovorans SPH-1 phosphoserine phosphatase SerB YP_001563869.1 3119500 R 398578 CDS YP_001563870.1 160898288 5748423 complement(3120293..3120958) 1 NC_010002.1 KEGG: ajs:Ajs_3158 hypothetical protein; hypothetical protein 3120958 5748423 Daci_2847 Delftia acidovorans SPH-1 hypothetical protein YP_001563870.1 3120293 R 398578 CDS YP_001563871.1 160898289 5748424 complement(3120976..3124470) 1 NC_010002.1 KEGG: ajs:Ajs_3157 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; transcription-repair coupling factor 3124470 5748424 Daci_2848 Delftia acidovorans SPH-1 transcription-repair coupling factor YP_001563871.1 3120976 R 398578 CDS YP_001563872.1 160898290 5748425 3124566..3125462 1 NC_010002.1 TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: ajs:Ajs_3156 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 3125462 5748425 Daci_2849 Delftia acidovorans SPH-1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_001563872.1 3124566 D 398578 CDS YP_001563873.1 160898291 5748426 3125470..3125958 1 NC_010002.1 KEGG: ajs:Ajs_3155 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3125958 5748426 Daci_2850 Delftia acidovorans SPH-1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_001563873.1 3125470 D 398578 CDS YP_001563874.1 160898292 5748427 complement(3126061..3127563) 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: aav:Aave_1583 integral membrane sensor signal transduction histidine kinase; histidine kinase 3127563 5748427 Daci_2851 Delftia acidovorans SPH-1 histidine kinase YP_001563874.1 3126061 R 398578 CDS YP_001563875.1 160898293 5748428 complement(3127807..3128538) 1 NC_010002.1 part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation; osmolarity response regulator 3128538 ompR 5748428 ompR Delftia acidovorans SPH-1 osmolarity response regulator YP_001563875.1 3127807 R 398578 CDS YP_001563876.1 160898294 5748429 3128727..3129596 1 NC_010002.1 PFAM: protein of unknown function DUF541; KEGG: ajs:Ajs_3152 protein of unknown function DUF541; hypothetical protein 3129596 5748429 Daci_2853 Delftia acidovorans SPH-1 hypothetical protein YP_001563876.1 3128727 D 398578 CDS YP_001563877.1 160898295 5748430 complement(3129669..3130463) 1 NC_010002.1 catalyzes the formation of acetoacetate from 3-hydroxybutyrate; 3-hydroxybutyrate dehydrogenase 3130463 5748430 Daci_2854 Delftia acidovorans SPH-1 3-hydroxybutyrate dehydrogenase YP_001563877.1 3129669 R 398578 CDS YP_001563878.1 160898296 5748431 3130533..3131540 1 NC_010002.1 PFAM: alpha/beta hydrolase fold; KEGG: aav:Aave_1587 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 3131540 5748431 Daci_2855 Delftia acidovorans SPH-1 alpha/beta hydrolase fold protein YP_001563878.1 3130533 D 398578 CDS YP_001563879.1 160898297 5748432 3131537..3133786 1 NC_010002.1 KEGG: aav:Aave_1588 (p)ppGpp synthetase I, SpoT/RelA; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; RelA/SpoT domain protein; (p)ppGpp synthetase I SpoT/RelA 3133786 5748432 Daci_2856 Delftia acidovorans SPH-1 (p)ppGpp synthetase I SpoT/RelA YP_001563879.1 3131537 D 398578 CDS YP_001563880.1 160898298 5748434 3134061..3134234 1 NC_010002.1 KEGG: dge:Dgeo_0531 hypothetical protein; hypothetical protein 3134234 5748434 Daci_2857 Delftia acidovorans SPH-1 hypothetical protein YP_001563880.1 3134061 D 398578 CDS YP_001563881.1 160898299 5748435 3134277..3134474 1 NC_010002.1 KEGG: ade:Adeh_1212 hypothetical protein; hypothetical protein 3134474 5748435 Daci_2858 Delftia acidovorans SPH-1 hypothetical protein YP_001563881.1 3134277 D 398578 CDS YP_001563882.1 160898300 5748436 complement(3134485..3135015) 1 NC_010002.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ecv:APECO1_667 spermidine N1-acetyltransferase; N-acetyltransferase GCN5 3135015 5748436 Daci_2859 Delftia acidovorans SPH-1 N-acetyltransferase GCN5 YP_001563882.1 3134485 R 398578 CDS YP_001563883.1 160898301 5748437 complement(3135020..3135700) 1 NC_010002.1 PFAM: regulatory protein TetR; Tetracycline transcriptional regulator YcdC domain protein; KEGG: vei:Veis_4153 transcriptional regulator, TetR family; TetR family transcriptional regulator 3135700 5748437 Daci_2860 Delftia acidovorans SPH-1 TetR family transcriptional regulator YP_001563883.1 3135020 R 398578 CDS YP_001563884.1 160898302 5748438 3136025..3137392 1 NC_010002.1 glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 3137392 gltD 5748438 gltD Delftia acidovorans SPH-1 glutamate synthase subunit beta YP_001563884.1 3136025 D 398578 CDS YP_001563885.1 160898303 5748439 3137427..3138746 1 NC_010002.1 catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines; dihydropyrimidine dehydrogenase 3138746 5748439 Daci_2862 Delftia acidovorans SPH-1 dihydropyrimidine dehydrogenase YP_001563885.1 3137427 D 398578 CDS YP_001563886.1 160898304 5748440 3138879..3140372 1 NC_010002.1 TIGRFAM: NCS1 nucleoside transporter family; PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: bur:Bcep18194_C6657 cytosine/purines, uracil, thiamine, allantoin transporter; NCS1 nucleoside transporter 3140372 5748440 Daci_2863 Delftia acidovorans SPH-1 NCS1 nucleoside transporter YP_001563886.1 3138879 D 398578 CDS YP_001563887.1 160898305 5748441 3140403..3141863 1 NC_010002.1 catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position; phenylhydantoinase 3141863 5748441 Daci_2864 Delftia acidovorans SPH-1 phenylhydantoinase YP_001563887.1 3140403 D 398578 CDS YP_001563888.1 160898306 5748442 3141888..3143153 1 NC_010002.1 KEGG: aav:Aave_0970 amidase, hydantoinase/carbamoylase family; TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20; peptidase dimerisation domain protein; amidase 3143153 5748442 Daci_2865 Delftia acidovorans SPH-1 amidase YP_001563888.1 3141888 D 398578 CDS YP_001563889.1 160898307 5748444 3143514..3144053 1 NC_010002.1 TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR; PFAM: PHB accumulation regulatory domain protein; PHA accumulation regulator DNA-binding protein; KEGG: ajs:Ajs_3148 polyhydroxyalkonate synthesis repressor, PhaR; polyhydroxyalkonate synthesis repressor PhaR 3144053 5748444 Daci_2866 Delftia acidovorans SPH-1 polyhydroxyalkonate synthesis repressor PhaR YP_001563889.1 3143514 D 398578 CDS YP_001563890.1 160898308 5748445 3144119..3145534 1 NC_010002.1 catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit; 30S ribosomal protein S12 methylthiotransferase 3145534 rimO 5748445 rimO Delftia acidovorans SPH-1 30S ribosomal protein S12 methylthiotransferase YP_001563890.1 3144119 D 398578 CDS YP_001563891.1 160898309 5748446 3145685..3146713 1 NC_010002.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ajs:Ajs_1889 alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase 3146713 5748446 Daci_2868 Delftia acidovorans SPH-1 alcohol dehydrogenase YP_001563891.1 3145685 D 398578 CDS YP_001563892.1 160898310 5748447 complement(3146777..3148195) 1 NC_010002.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: nwi:Nwi_0162 multi antimicrobial extrusion protein MatE; MATE efflux family protein 3148195 5748447 Daci_2869 Delftia acidovorans SPH-1 MATE efflux family protein YP_001563892.1 3146777 R 398578 CDS YP_001563893.1 160898311 5748448 complement(3148250..3148870) 1 NC_010002.1 KEGG: pae:PA3765 hypothetical protein; hypothetical protein 3148870 5748448 Daci_2870 Delftia acidovorans SPH-1 hypothetical protein YP_001563893.1 3148250 R 398578 CDS YP_001563894.1 160898312 5748449 complement(3149007..3149561) 1 NC_010002.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 3149561 5748449 Daci_2871 Delftia acidovorans SPH-1 elongation factor P YP_001563894.1 3149007 R 398578 CDS YP_001563895.1 160898313 5748450 complement(3149724..3150857) 1 NC_010002.1 KEGG: ajs:Ajs_2874 hypothetical protein; hypothetical protein 3150857 5748450 Daci_2872 Delftia acidovorans SPH-1 hypothetical protein YP_001563895.1 3149724 R 398578 CDS YP_001563896.1 160898314 5748451 complement(3150863..3151747) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_2873 transcriptional regulator, LysR family; LysR family transcriptional regulator 3151747 5748451 Daci_2873 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001563896.1 3150863 R 398578 CDS YP_001563897.1 160898315 5748452 3151916..3153133 1 NC_010002.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: ajs:Ajs_2872 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 3153133 5748452 Daci_2874 Delftia acidovorans SPH-1 L-carnitine dehydratase/bile acid-inducible protein F YP_001563897.1 3151916 D 398578 CDS YP_001563898.1 160898316 5748453 3153130..3154119 1 NC_010002.1 PFAM: pyruvate carboxyltransferase; KEGG: aav:Aave_1652 pyruvate carboxyltransferase; pyruvate carboxyltransferase 3154119 5748453 Daci_2875 Delftia acidovorans SPH-1 pyruvate carboxyltransferase YP_001563898.1 3153130 D 398578 CDS YP_001563899.1 160898317 5748454 3154171..3155157 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_2869 uncharacterized protein UPF0065; hypothetical protein 3155157 5748454 Daci_2876 Delftia acidovorans SPH-1 hypothetical protein YP_001563899.1 3154171 D 398578 CDS YP_001563900.1 160898318 5748455 3155216..3157168 1 NC_010002.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 3157168 uvrC 5748455 uvrC Delftia acidovorans SPH-1 excinuclease ABC subunit C YP_001563900.1 3155216 D 398578 CDS YP_001563901.1 160898319 5748456 3157237..3157815 1 NC_010002.1 KEGG: ajs:Ajs_2622 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3157815 5748456 Daci_2878 Delftia acidovorans SPH-1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_001563901.1 3157237 D 398578 CDS YP_001563902.1 160898320 5748457 3158268..3158540 1 NC_010002.1 PFAM: histone family protein DNA-binding protein; KEGG: ajs:Ajs_2621 histone family protein DNA-binding protein; histone family protein DNA-binding protein 3158540 5748457 Daci_2879 Delftia acidovorans SPH-1 histone family protein DNA-binding protein YP_001563902.1 3158268 D 398578 CDS YP_001563903.1 160898321 5748459 3158691..3160586 1 NC_010002.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: ajs:Ajs_2620 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 3160586 5748459 Daci_2880 Delftia acidovorans SPH-1 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001563903.1 3158691 D 398578 CDS YP_001563904.1 160898322 5748462 3161417..3162031 1 NC_010002.1 KEGG: reh:H16_A0415 type IV pilus transmembrane protein FimT; Tfp pilus assembly protein FimT-like protein 3162031 5748462 Daci_2881 Delftia acidovorans SPH-1 Tfp pilus assembly protein FimT-like protein YP_001563904.1 3161417 D 398578 CDS YP_001563905.1 160898323 5748463 3162031..3162576 1 NC_010002.1 TIGRFAM: type IV pilus modification protein PilV; KEGG: pap:PSPA7_5191 type IV pilus modification protein PilV; type IV pilus modification protein PilV 3162576 5748463 Daci_2882 Delftia acidovorans SPH-1 type IV pilus modification protein PilV YP_001563905.1 3162031 D 398578 CDS YP_001563906.1 160898324 5748464 3162605..3163399 1 NC_010002.1 KEGG: pmy:Pmen_0960 Tfp pilus assembly protein PilW-like protein; Tfp pilus assembly protein PilW-like protein 3163399 5748464 Daci_2883 Delftia acidovorans SPH-1 Tfp pilus assembly protein PilW-like protein YP_001563906.1 3162605 D 398578 CDS YP_001563907.1 160898325 5748465 3163432..3163989 1 NC_010002.1 KEGG: psa:PST_0971 type 4 fimbrial biogenesis protein PilX; type 4 fimbrial biogenesis protein PilX 3163989 5748465 Daci_2884 Delftia acidovorans SPH-1 type 4 fimbrial biogenesis protein PilX YP_001563907.1 3163432 D 398578 CDS YP_001563908.1 160898326 5748466 3164009..3168490 1 NC_010002.1 KEGG: xft:PD1611 fimbrial assembly protein; fimbrial assembly protein 3168490 5748466 Daci_2885 Delftia acidovorans SPH-1 fimbrial assembly protein YP_001563908.1 3164009 D 398578 CDS YP_001563909.1 160898327 5748467 3168487..3168999 1 NC_010002.1 KEGG: pmy:Pmen_0957 Tfp pilus assembly protein PilE-like protein; Tfp pilus assembly protein PilE-like protein 3168999 5748467 Daci_2886 Delftia acidovorans SPH-1 Tfp pilus assembly protein PilE-like protein YP_001563909.1 3168487 D 398578 CDS YP_001563910.1 160898328 5748468 complement(3169105..3169794) 1 NC_010002.1 PFAM: isochorismatase hydrolase; KEGG: pae:PA2419 probable hydrolase; isochorismatase hydrolase 3169794 5748468 Daci_2887 Delftia acidovorans SPH-1 isochorismatase hydrolase YP_001563910.1 3169105 R 398578 CDS YP_001563911.1 160898329 5748469 complement(3169805..3170431) 1 NC_010002.1 PFAM: isochorismatase hydrolase; KEGG: cko:CKO_02173 hypothetical protein; isochorismatase hydrolase 3170431 5748469 Daci_2888 Delftia acidovorans SPH-1 isochorismatase hydrolase YP_001563911.1 3169805 R 398578 CDS YP_001563912.1 160898330 5748470 3170564..3171466 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bmn:BMA10247_1774 transcriptional regulator, LysR family; LysR family transcriptional regulator 3171466 5748470 Daci_2889 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001563912.1 3170564 D 398578 CDS YP_001563913.1 160898331 5748471 complement(3171550..3172050) 1 NC_010002.1 PFAM: protein of unknown function DUF461; KEGG: rfr:Rfer_0618 protein of unknown function DUF461; hypothetical protein 3172050 5748471 Daci_2890 Delftia acidovorans SPH-1 hypothetical protein YP_001563913.1 3171550 R 398578 CDS YP_001563914.1 160898332 5748472 complement(3172047..3173285) 1 NC_010002.1 KEGG: dar:Daro_0198 hypothetical protein; hypothetical protein 3173285 5748472 Daci_2891 Delftia acidovorans SPH-1 hypothetical protein YP_001563914.1 3172047 R 398578 CDS YP_001563915.1 160898333 5748473 complement(3173287..3174486) 1 NC_010002.1 PFAM: Di-haem cytochrome c peroxidase; KEGG: lil:LA2974 methylamine utilization protein mauG; cytochrome-c peroxidase 3174486 5748473 Daci_2892 Delftia acidovorans SPH-1 cytochrome-c peroxidase YP_001563915.1 3173287 R 398578 CDS YP_001563916.1 160898334 5748474 complement(3174486..3175514) 1 NC_010002.1 KEGG: mxa:MXAN_0976 putative lipoprotein; hypothetical protein 3175514 5748474 Daci_2893 Delftia acidovorans SPH-1 hypothetical protein YP_001563916.1 3174486 R 398578 CDS YP_001563917.1 160898335 5748475 complement(3175571..3176056) 1 NC_010002.1 hypothetical protein 3176056 5748475 Daci_2894 Delftia acidovorans SPH-1 hypothetical protein YP_001563917.1 3175571 R 398578 CDS YP_001563918.1 160898336 5748476 complement(3176067..3176534) 1 NC_010002.1 PFAM: protein of unknown function DUF461; KEGG: ajs:Ajs_3343 protein of unknown function DUF461; hypothetical protein 3176534 5748476 Daci_2895 Delftia acidovorans SPH-1 hypothetical protein YP_001563918.1 3176067 R 398578 CDS YP_001563919.1 160898337 5748477 complement(3176623..3178683) 1 NC_010002.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: aav:Aave_4448 TonB-dependent receptor; TonB-dependent receptor 3178683 5748477 Daci_2896 Delftia acidovorans SPH-1 TonB-dependent receptor YP_001563919.1 3176623 R 398578 CDS YP_001563920.1 160898338 5748478 complement(3179067..3179426) 1 NC_010002.1 KEGG: aav:Aave_4449 hypothetical protein; hypothetical protein 3179426 5748478 Daci_2897 Delftia acidovorans SPH-1 hypothetical protein YP_001563920.1 3179067 R 398578 CDS YP_001563921.1 160898339 5748479 3179640..3179990 1 NC_010002.1 KEGG: vei:Veis_4741 hypothetical protein; hypothetical protein 3179990 5748479 Daci_2898 Delftia acidovorans SPH-1 hypothetical protein YP_001563921.1 3179640 D 398578 CDS YP_001563922.1 160898340 5748480 3180184..3182253 1 NC_010002.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mms:mma_0066 TonB-dependent receptor; TonB-dependent siderophore receptor 3182253 5748480 Daci_2899 Delftia acidovorans SPH-1 TonB-dependent siderophore receptor YP_001563922.1 3180184 D 398578 CDS YP_001563923.1 160898341 5748481 complement(3182359..3182490) 1 NC_010002.1 KEGG: xac:XAC4326 urea amidolyase; hypothetical protein 3182490 5748481 Daci_2900 Delftia acidovorans SPH-1 hypothetical protein YP_001563923.1 3182359 R 398578 CDS YP_001563924.1 160898342 5748483 complement(3182758..3184515) 1 NC_010002.1 KEGG: aav:Aave_1797 peptidase M14, carboxypeptidase A; peptidase M14, carboxypeptidase A 3184515 5748483 Daci_2901 Delftia acidovorans SPH-1 peptidase M14, carboxypeptidase A YP_001563924.1 3182758 R 398578 CDS YP_001563925.1 160898343 5748484 complement(3184757..3186553) 1 NC_010002.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: ajs:Ajs_2609 DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase 3186553 5748484 Daci_2902 Delftia acidovorans SPH-1 DEAD/DEAH box helicase YP_001563925.1 3184757 R 398578 CDS YP_001563926.1 160898344 5748485 3186821..3188482 1 NC_010002.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; putative ABC transporter ATP-binding protein 3188482 5748485 Daci_2903 Delftia acidovorans SPH-1 putative ABC transporter ATP-binding protein YP_001563926.1 3186821 D 398578 CDS YP_001563927.1 160898345 5748486 3188543..3191146 1 NC_010002.1 KEGG: aav:Aave_1802 hypothetical protein; hypothetical protein 3191146 5748486 Daci_2904 Delftia acidovorans SPH-1 hypothetical protein YP_001563927.1 3188543 D 398578 CDS YP_001563928.1 160898346 5748487 3191314..3192459 1 NC_010002.1 PFAM: monooxygenase FAD-binding; KEGG: reu:Reut_B3601 salicylate 1-monooxygenase; monooxygenase FAD-binding 3192459 5748487 Daci_2905 Delftia acidovorans SPH-1 monooxygenase FAD-binding YP_001563928.1 3191314 D 398578 CDS YP_001563929.1 160898347 5748488 complement(3192466..3193476) 1 NC_010002.1 PFAM: peptidase S58 DmpA; KEGG: ajs:Ajs_2605 peptidase S58, DmpA; peptidase S58 DmpA 3193476 5748488 Daci_2906 Delftia acidovorans SPH-1 peptidase S58 DmpA YP_001563929.1 3192466 R 398578 CDS YP_001563930.1 160898348 5748489 complement(3193543..3193944) 1 NC_010002.1 KEGG: ajs:Ajs_2603 hypothetical protein; hypothetical protein 3193944 5748489 Daci_2907 Delftia acidovorans SPH-1 hypothetical protein YP_001563930.1 3193543 R 398578 CDS YP_001563931.1 160898349 5748490 complement(3193960..3194508) 1 NC_010002.1 PFAM: protein of unknown function DUF411; KEGG: ajs:Ajs_2602 protein of unknown function DUF411; hypothetical protein 3194508 5748490 Daci_2908 Delftia acidovorans SPH-1 hypothetical protein YP_001563931.1 3193960 R 398578 CDS YP_001563932.1 160898350 5748491 complement(3194505..3194996) 1 NC_010002.1 PFAM: blue (type 1) copper domain protein; KEGG: ajs:Ajs_2601 blue (type 1) copper domain protein; blue (type1) copper domain-containing protein 3194996 5748491 Daci_2909 Delftia acidovorans SPH-1 blue (type1) copper domain-containing protein YP_001563932.1 3194505 R 398578 CDS YP_001563933.1 160898351 5748492 complement(3195017..3196399) 1 NC_010002.1 PFAM: multicopper oxidase type 2; multicopper oxidase type 3; KEGG: ajs:Ajs_2600 multicopper oxidase, type 3; multicopper oxidase type 3 3196399 5748492 Daci_2910 Delftia acidovorans SPH-1 multicopper oxidase type 3 YP_001563933.1 3195017 R 398578 CDS YP_001563934.1 160898352 5748493 complement(3196401..3197849) 1 NC_010002.1 KEGG: ajs:Ajs_2599 copper tolerance protein; copper tolerance protein 3197849 5748493 Daci_2911 Delftia acidovorans SPH-1 copper tolerance protein YP_001563934.1 3196401 R 398578 CDS YP_001563935.1 160898353 5748494 complement(3197846..3198238) 1 NC_010002.1 KEGG: ajs:Ajs_2598 hypothetical protein; hypothetical protein 3198238 5748494 Daci_2912 Delftia acidovorans SPH-1 hypothetical protein YP_001563935.1 3197846 R 398578 CDS YP_001563936.1 160898354 5748495 complement(3198327..3198818) 1 NC_010002.1 KEGG: ajs:Ajs_2597 hypothetical protein; hypothetical protein 3198818 5748495 Daci_2913 Delftia acidovorans SPH-1 hypothetical protein YP_001563936.1 3198327 R 398578 CDS YP_001563937.1 160898355 5748496 complement(3198867..3199253) 1 NC_010002.1 KEGG: ajs:Ajs_2595 hypothetical protein; hypothetical protein 3199253 5748496 Daci_2914 Delftia acidovorans SPH-1 hypothetical protein YP_001563937.1 3198867 R 398578 CDS YP_001563938.1 160898356 5748497 complement(3199250..3201448) 1 NC_010002.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: ajs:Ajs_2594 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase 3201448 5748497 Daci_2915 Delftia acidovorans SPH-1 heavy metal translocating P-type ATPase YP_001563938.1 3199250 R 398578 CDS YP_001563939.1 160898357 5748498 3201488..3201952 1 NC_010002.1 PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: ajs:Ajs_2593 putative transcriptional regulator, MerR family; MerR family transcriptional regulator 3201952 5748498 Daci_2916 Delftia acidovorans SPH-1 MerR family transcriptional regulator YP_001563939.1 3201488 D 398578 CDS YP_001563940.1 160898358 5748499 3202025..3202828 1 NC_010002.1 KEGG: ajs:Ajs_2592 ABC-type transport system ipermease component; ABC transporter permease 3202828 5748499 Daci_2917 Delftia acidovorans SPH-1 ABC transporter permease YP_001563940.1 3202025 D 398578 CDS YP_001563941.1 160898359 5748500 3202894..3203886 1 NC_010002.1 PFAM: Mammalian cell entry related domain protein; KEGG: aav:Aave_1818 mammalian cell entry related domain protein; hypothetical protein 3203886 5748500 Daci_2918 Delftia acidovorans SPH-1 hypothetical protein YP_001563941.1 3202894 D 398578 CDS YP_001563942.1 160898360 5748501 3203883..3204617 1 NC_010002.1 KEGG: ajs:Ajs_2590 hypothetical protein; hypothetical protein 3204617 5748501 Daci_2919 Delftia acidovorans SPH-1 hypothetical protein YP_001563942.1 3203883 D 398578 CDS YP_001563943.1 160898361 5748502 complement(3205076..3206104) 1 NC_010002.1 PFAM: porin Gram-negative type; KEGG: aav:Aave_1125 porin, gram-negative type; porin 3206104 5748502 Daci_2920 Delftia acidovorans SPH-1 porin YP_001563943.1 3205076 R 398578 CDS YP_001563944.1 160898362 5748503 3206583..3207272 1 NC_010002.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: ajs:Ajs_0011 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 3207272 5748503 Daci_2921 Delftia acidovorans SPH-1 two component LuxR family transcriptional regulator YP_001563944.1 3206583 D 398578 CDS YP_001563945.1 160898363 5748504 complement(3207297..3209948) 1 NC_010002.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: ajs:Ajs_0010 multi-sensor hybrid histidine kinase; PAS/PAC sensor hybrid histidine kinase 3209948 5748504 Daci_2922 Delftia acidovorans SPH-1 PAS/PAC sensor hybrid histidine kinase YP_001563945.1 3207297 R 398578 CDS YP_001563946.1 160898364 5748505 3210161..3211489 1 NC_010002.1 PFAM: sodium:dicarboxylate symporter; KEGG: ajs:Ajs_0009 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 3211489 5748505 Daci_2923 Delftia acidovorans SPH-1 sodium:dicarboxylate symporter YP_001563946.1 3210161 D 398578 CDS YP_001563947.1 160898365 5748506 complement(3211578..3212750) 1 NC_010002.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rso:RSc1248 hypothetical protein; oxidoreductase domain-containing protein 3212750 5748506 Daci_2924 Delftia acidovorans SPH-1 oxidoreductase domain-containing protein YP_001563947.1 3211578 R 398578 CDS YP_001563948.1 160898366 5748507 complement(3212762..3213775) 1 NC_010002.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rso:RSc1246 putative oxidoreductase myo-inositol 2-dehydrogenase signal peptide protein; inositol 2-dehydrogenase 3213775 5748507 Daci_2925 Delftia acidovorans SPH-1 inositol 2-dehydrogenase YP_001563948.1 3212762 R 398578 CDS YP_001563949.1 160898367 5748508 complement(3213791..3214612) 1 NC_010002.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rso:RSc1245 putative protein implicated in myo-inositol catabolique pathway; xylose isomerase domain-containing protein 3214612 5748508 Daci_2926 Delftia acidovorans SPH-1 xylose isomerase domain-containing protein YP_001563949.1 3213791 R 398578 CDS YP_001563950.1 160898368 5748509 complement(3214622..3215545) 1 NC_010002.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: bur:Bcep18194_A4571 xylose isomerase-like TIM barrel; xylose isomerase domain-containing protein 3215545 5748509 Daci_2927 Delftia acidovorans SPH-1 xylose isomerase domain-containing protein YP_001563950.1 3214622 R 398578 CDS YP_001563951.1 160898369 5748510 complement(3215570..3216625) 1 NC_010002.1 PFAM: inner-membrane translocator; KEGG: rso:RSc1243 probable sugar transmembrane ABC transporter protein; monosaccharide-transporting ATPase 3216625 5748510 Daci_2928 Delftia acidovorans SPH-1 monosaccharide-transporting ATPase YP_001563951.1 3215570 R 398578 CDS YP_001563952.1 160898370 5748511 complement(3216654..3218219) 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_1305 ABC transporter related; ABC transporter-like protein 3218219 5748511 Daci_2929 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001563952.1 3216654 R 398578 CDS YP_001563953.1 160898371 5748512 complement(3218223..3219200) 1 NC_010002.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: rso:RSc1241 putative rhizopine-binding precursor signal peptide protein; periplasmic-binding protein/LacI transcriptional regulator 3219200 5748512 Daci_2930 Delftia acidovorans SPH-1 periplasmic-binding protein/LacI transcriptional regulator YP_001563953.1 3218223 R 398578 CDS YP_001563954.1 160898372 5748513 3219455..3221338 1 NC_010002.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: rso:RSc1239 putative acetolactate synthase protein; thiamine pyrophosphate protein central region 3221338 5748513 Daci_2931 Delftia acidovorans SPH-1 thiamine pyrophosphate protein central region YP_001563954.1 3219455 D 398578 CDS YP_001563955.1 160898373 5748514 3221404..3222330 1 NC_010002.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: bvi:Bcep1808_1385 xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein 3222330 5748514 Daci_2932 Delftia acidovorans SPH-1 xylose isomerase domain-containing protein YP_001563955.1 3221404 D 398578 CDS YP_001563956.1 160898374 5748515 3222375..3223472 1 NC_010002.1 PFAM: porin Gram-negative type; KEGG: rso:RSc1236 probable outer membrane porin lipoprotein transmembrane; porin 3223472 5748515 Daci_2933 Delftia acidovorans SPH-1 porin YP_001563956.1 3222375 D 398578 CDS YP_001563957.1 160898375 5748516 3223533..3224582 1 NC_010002.1 KEGG: pen:PSEEN2966 hypothetical protein; hypothetical protein 3224582 5748516 Daci_2934 Delftia acidovorans SPH-1 hypothetical protein YP_001563957.1 3223533 D 398578 CDS YP_001563958.1 160898376 5748517 complement(3224600..3225745) 1 NC_010002.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_0103 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 3225745 5748517 Daci_2935 Delftia acidovorans SPH-1 acyl-CoA dehydrogenase domain-containing protein YP_001563958.1 3224600 R 398578 CDS YP_001563959.1 160898377 5748518 complement(3225772..3226479) 1 NC_010002.1 KEGG: xau:Xaut_1752 cell morphology protein; cell morphology protein 3226479 5748518 Daci_2936 Delftia acidovorans SPH-1 cell morphology protein YP_001563959.1 3225772 R 398578 CDS YP_001563960.1 160898378 5748519 complement(3226476..3227960) 1 NC_010002.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bbr:BB4380 putative D-alanine-D-alanyl carrier protein ligase; AMP-dependent synthetase/ligase 3227960 5748519 Daci_2937 Delftia acidovorans SPH-1 AMP-dependent synthetase/ligase YP_001563960.1 3226476 R 398578 CDS YP_001563961.1 160898379 5748520 complement(3228018..3228257) 1 NC_010002.1 PFAM: phosphopantetheine-binding; KEGG: bpa:BPP3911 acyl carrier protein; phosphopantetheine-binding protein 3228257 5748520 Daci_2938 Delftia acidovorans SPH-1 phosphopantetheine-binding protein YP_001563961.1 3228018 R 398578 CDS YP_001563962.1 160898380 5748521 complement(3228279..3229859) 1 NC_010002.1 PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: aba:Acid345_4412 membrane bound O-acyl transferase, MBOAT; membrane bound O-acyl transferase MBOAT family protein 3229859 5748521 Daci_2939 Delftia acidovorans SPH-1 membrane bound O-acyl transferase MBOAT family protein YP_001563962.1 3228279 R 398578 CDS YP_001563963.1 160898381 5748522 complement(3229873..3231006) 1 NC_010002.1 KEGG: xau:Xaut_1750 cell morphology protein; cell morphology protein 3231006 5748522 Daci_2940 Delftia acidovorans SPH-1 cell morphology protein YP_001563963.1 3229873 R 398578 CDS YP_001563964.1 160898382 5748523 complement(3231011..3232051) 1 NC_010002.1 KEGG: xau:Xaut_1749 hypothetical protein; hypothetical protein 3232051 5748523 Daci_2941 Delftia acidovorans SPH-1 hypothetical protein YP_001563964.1 3231011 R 398578 CDS YP_001563965.1 160898383 5748524 complement(3232109..3234976) 1 NC_010002.1 PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: mms:mma_2622 hypothetical protein; hypothetical protein 3234976 5748524 Daci_2942 Delftia acidovorans SPH-1 hypothetical protein YP_001563965.1 3232109 R 398578 CDS YP_001563966.1 160898384 5748525 complement(3234973..3236694) 1 NC_010002.1 KEGG: mms:mma_2623 bacteriophage N4 adsorption protein B; bacteriophage N4 adsorption protein B 3236694 5748525 Daci_2943 Delftia acidovorans SPH-1 bacteriophage N4 adsorption protein B YP_001563966.1 3234973 R 398578 CDS YP_001563967.1 160898385 5748526 complement(3236878..3238962) 1 NC_010002.1 KEGG: psp:PSPPH_1082 hypothetical protein; hypothetical protein 3238962 5748526 Daci_2944 Delftia acidovorans SPH-1 hypothetical protein YP_001563967.1 3236878 R 398578 CDS YP_001563968.1 160898386 5748527 complement(3239041..3240243) 1 NC_010002.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: mms:mma_2625 UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 3240243 5748527 Daci_2945 Delftia acidovorans SPH-1 UDP-N-acetylglucosamine 2-epimerase YP_001563968.1 3239041 R 398578 CDS YP_001563969.1 160898387 5748529 3241574..3242632 1 NC_010002.1 KEGG: mxa:MXAN_3435 hypothetical protein; hypothetical protein 3242632 5748529 Daci_2946 Delftia acidovorans SPH-1 hypothetical protein YP_001563969.1 3241574 D 398578 CDS YP_001563970.1 160898388 5748530 3242678..3243778 1 NC_010002.1 hypothetical protein 3243778 5748530 Daci_2947 Delftia acidovorans SPH-1 hypothetical protein YP_001563970.1 3242678 D 398578 CDS YP_001563971.1 160898389 5748531 3243843..3245669 1 NC_010002.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: cbe:Cbei_2655 TPR repeat-containing protein; hypothetical protein 3245669 5748531 Daci_2948 Delftia acidovorans SPH-1 hypothetical protein YP_001563971.1 3243843 D 398578 CDS YP_001563972.1 160898390 5748532 complement(3245693..3246910) 1 NC_010002.1 PFAM: major facilitator superfamily MFS_1; KEGG: aav:Aave_2534 major facilitator superfamily MFS_1; major facilitator transporter 3246910 5748532 Daci_2949 Delftia acidovorans SPH-1 major facilitator transporter YP_001563972.1 3245693 R 398578 CDS YP_001563973.1 160898391 5748533 3246963..3247973 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_2533 transcriptional regulator, LysR family; LysR family transcriptional regulator 3247973 5748533 Daci_2950 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001563973.1 3246963 D 398578 CDS YP_001563974.1 160898392 5748534 3248094..3248642 1 NC_010002.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rso:RS00872 probable extracytoplasmic function sigma factor transcription regulator protein; ECF subfamily RNA polymerase sigma-24 factor 3248642 5748534 Daci_2951 Delftia acidovorans SPH-1 ECF subfamily RNA polymerase sigma-24 factor YP_001563974.1 3248094 D 398578 CDS YP_001563975.1 160898393 5748535 3248632..3249591 1 NC_010002.1 PFAM: FecR protein; KEGG: pau:PA14_46650 putative transmembrane sensor; anti-FecI sigma factor FecR 3249591 5748535 Daci_2952 Delftia acidovorans SPH-1 anti-FecI sigma factor FecR YP_001563975.1 3248632 D 398578 CDS YP_001563976.1 160898394 5748536 3249803..3252181 1 NC_010002.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: reh:H16_A3182 outer membrane receptor, TonB dependent; TonB-dependent siderophore receptor 3252181 5748536 Daci_2953 Delftia acidovorans SPH-1 TonB-dependent siderophore receptor YP_001563976.1 3249803 D 398578 CDS YP_001563977.1 160898395 5748537 complement(3252269..3252532) 1 NC_010002.1 KEGG: aav:Aave_3958 hypothetical protein; hypothetical protein 3252532 5748537 Daci_2954 Delftia acidovorans SPH-1 hypothetical protein YP_001563977.1 3252269 R 398578 CDS YP_001563978.1 160898396 5748538 3252739..3253032 1 NC_010002.1 KEGG: aav:Aave_3397 hypothetical protein; hypothetical protein 3253032 5748538 Daci_2955 Delftia acidovorans SPH-1 hypothetical protein YP_001563978.1 3252739 D 398578 CDS YP_001563979.1 160898397 5748539 3253119..3255071 1 NC_010002.1 KEGG: mes:Meso_1904 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor hybrid histidine kinase 3255071 5748539 Daci_2956 Delftia acidovorans SPH-1 PAS/PAC sensor hybrid histidine kinase YP_001563979.1 3253119 D 398578 CDS YP_001563980.1 160898398 5748540 complement(3255730..3257751) 1 NC_010002.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; SMART: AAA ATPase; KEGG: smd:Smed_4035 GAF modulated sigma54 specific transcriptional regulator, fis family; Fis family GAF modulated sigma54 specific transcriptional regulator 3257751 5748540 Daci_2957 Delftia acidovorans SPH-1 Fis family GAF modulated sigma54 specific transcriptional regulator YP_001563980.1 3255730 R 398578 CDS YP_001563981.1 160898399 5748541 3258000..3259802 1 NC_010002.1 KEGG: atc:AGR_L_284 flavin-containing monooxygenase, putative; flavin-containing monooxygenase 3259802 5748541 Daci_2958 Delftia acidovorans SPH-1 flavin-containing monooxygenase YP_001563981.1 3258000 D 398578 CDS YP_001563982.1 160898400 5748542 3259818..3260939 1 NC_010002.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: aci:ACIAD1021 putative (R,R)-butanediol dehydrogenase; alcohol dehydrogenase 3260939 5748542 Daci_2959 Delftia acidovorans SPH-1 alcohol dehydrogenase YP_001563982.1 3259818 D 398578 CDS YP_001563983.1 160898401 5748544 complement(3261170..3262153) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pap:PSPA7_2229 probable transcriptional regulator; LysR family transcriptional regulator 3262153 5748544 Daci_2960 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001563983.1 3261170 R 398578 CDS YP_001563984.1 160898402 5748545 3262338..3262742 1 NC_010002.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: azo:azo2359 oxaloacetate tautomerase; 4-oxalocrotonate tautomerase 3262742 5748545 Daci_2961 Delftia acidovorans SPH-1 4-oxalocrotonate tautomerase YP_001563984.1 3262338 D 398578 CDS YP_001563985.1 160898403 5748546 complement(3262788..3263705) 1 NC_010002.1 PFAM: band 7 protein; KEGG: aav:Aave_3259 band 7 protein; hypothetical protein 3263705 5748546 Daci_2962 Delftia acidovorans SPH-1 hypothetical protein YP_001563985.1 3262788 R 398578 CDS YP_001563986.1 160898404 5748547 complement(3263806..3264231) 1 NC_010002.1 PFAM: protein of unknown function DUF107; KEGG: aav:Aave_3258 protein of unknown function DUF107; hypothetical protein 3264231 5748547 Daci_2963 Delftia acidovorans SPH-1 hypothetical protein YP_001563986.1 3263806 R 398578 CDS YP_001563987.1 160898405 5748548 3264381..3266996 1 NC_010002.1 PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: ajs:Ajs_2762 lysine decarboxylase; lysine decarboxylase 3266996 5748548 Daci_2964 Delftia acidovorans SPH-1 lysine decarboxylase YP_001563987.1 3264381 D 398578 CDS YP_001563988.1 160898406 5748549 complement(3267093..3268154) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: reu:Reut_B4957 hypothetical protein; hypothetical protein 3268154 5748549 Daci_2965 Delftia acidovorans SPH-1 hypothetical protein YP_001563988.1 3267093 R 398578 CDS YP_001563989.1 160898407 5748550 complement(3268300..3269547) 1 NC_010002.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: pol:Bpro_4514 pyruvate carboxyltransferase; L-carnitine dehydratase/bile acid-inducible protein F 3269547 5748550 Daci_2966 Delftia acidovorans SPH-1 L-carnitine dehydratase/bile acid-inducible protein F YP_001563989.1 3268300 R 398578 CDS YP_001563990.1 160898408 5748551 complement(3269587..3270582) 1 NC_010002.1 PFAM: pyruvate carboxyltransferase; KEGG: pna:Pnap_3685 pyruvate carboxyltransferase; pyruvate carboxyltransferase 3270582 5748551 Daci_2967 Delftia acidovorans SPH-1 pyruvate carboxyltransferase YP_001563990.1 3269587 R 398578 CDS YP_001563991.1 160898409 5748552 3270698..3271429 1 NC_010002.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: pol:Bpro_4515 transcriptional regulator, IclR family; IclR family transcriptional regulator 3271429 5748552 Daci_2968 Delftia acidovorans SPH-1 IclR family transcriptional regulator YP_001563991.1 3270698 D 398578 CDS YP_001563992.1 160898410 5748553 complement(3271454..3272374) 1 NC_010002.1 PFAM: zinc/iron permease; KEGG: aav:Aave_2663 zinc/iron permease; zinc/iron permease 3272374 5748553 Daci_2969 Delftia acidovorans SPH-1 zinc/iron permease YP_001563992.1 3271454 R 398578 CDS YP_001563993.1 160898411 5748554 complement(3272410..3273045) 1 NC_010002.1 PFAM: manganese and iron superoxide dismutase; KEGG: aav:Aave_2662 superoxide dismutase; superoxide dismutase 3273045 5748554 Daci_2970 Delftia acidovorans SPH-1 superoxide dismutase YP_001563993.1 3272410 R 398578 CDS YP_001563994.1 160898412 5748555 complement(3273108..3273620) 1 NC_010002.1 KEGG: asa:ASA_3720 hypothetical protein; hypothetical protein 3273620 5748555 Daci_2971 Delftia acidovorans SPH-1 hypothetical protein YP_001563994.1 3273108 R 398578 CDS YP_001563995.1 160898413 5748556 complement(3273837..3274637) 1 NC_010002.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ajs:Ajs_1809 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3274637 5748556 Daci_2972 Delftia acidovorans SPH-1 short-chain dehydrogenase/reductase SDR YP_001563995.1 3273837 R 398578 CDS YP_001563996.1 160898414 5748557 3274750..3276579 1 NC_010002.1 PFAM: extracellular solute-binding protein family 5; KEGG: ajs:Ajs_1810 extracellular solute-binding protein, family 5; extracellular solute-binding protein 3276579 5748557 Daci_2973 Delftia acidovorans SPH-1 extracellular solute-binding protein YP_001563996.1 3274750 D 398578 CDS YP_001563997.1 160898415 5748558 3276676..3277704 1 NC_010002.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_1811 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3277704 5748558 Daci_2974 Delftia acidovorans SPH-1 binding-protein-dependent transport system inner membrane protein YP_001563997.1 3276676 D 398578 CDS YP_001563998.1 160898416 5748559 3277836..3278975 1 NC_010002.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_1812 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3278975 5748559 Daci_2975 Delftia acidovorans SPH-1 binding-protein-dependent transport system inner membrane protein YP_001563998.1 3277836 D 398578 CDS YP_001563999.1 160898417 5748560 3278972..3280660 1 NC_010002.1 PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: ajs:Ajs_1813 ABC transporter related; ABC transporter-like protein 3280660 5748560 Daci_2976 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001563999.1 3278972 D 398578 CDS YP_001564000.1 160898418 5748561 complement(3280679..3281305) 1 NC_010002.1 PFAM: Lipocalin family protein; KEGG: aav:Aave_3140 lipocalin family protein; lipocalin family protein 3281305 5748561 Daci_2977 Delftia acidovorans SPH-1 lipocalin family protein YP_001564000.1 3280679 R 398578 CDS YP_001564001.1 160898419 5748562 3281550..3281711 1 NC_010002.1 KEGG: aav:Aave_0776 hypothetical protein; hypothetical protein 3281711 5748562 Daci_2978 Delftia acidovorans SPH-1 hypothetical protein YP_001564001.1 3281550 D 398578 CDS YP_001564002.1 160898420 5748563 3281992..3282297 1 NC_010002.1 KEGG: net:Neut_2619 hypothetical protein; hypothetical protein 3282297 5748563 Daci_2979 Delftia acidovorans SPH-1 hypothetical protein YP_001564002.1 3281992 D 398578 CDS YP_001564003.1 160898421 5748564 3282305..3283705 1 NC_010002.1 PFAM: integrase family protein; KEGG: pol:Bpro_1705 phage integrase; integrase family protein 3283705 5748564 Daci_2980 Delftia acidovorans SPH-1 integrase family protein YP_001564003.1 3282305 D 398578 CDS YP_001564004.1 160898422 5748565 3283715..3286324 1 NC_010002.1 PFAM: integrase family protein; KEGG: shn:Shewana3_2916 hypothetical protein; integrase family protein 3286324 5748565 Daci_2981 Delftia acidovorans SPH-1 integrase family protein YP_001564004.1 3283715 D 398578 CDS YP_001564005.1 160898423 5748566 3286321..3287001 1 NC_010002.1 KEGG: pol:Bpro_1703 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 3287001 5748566 Daci_2982 Delftia acidovorans SPH-1 alpha/beta hydrolase fold protein YP_001564005.1 3286321 D 398578 CDS YP_001564006.1 160898424 5748567 complement(3287182..3287517) 1 NC_010002.1 KEGG: ajs:Ajs_0638 transcriptional regulatory protein, MerR family; MerR family transcriptional regulator 3287517 5748567 Daci_2983 Delftia acidovorans SPH-1 MerR family transcriptional regulator YP_001564006.1 3287182 R 398578 CDS YP_001564007.1 160898425 5748568 complement(3287514..3288509) 1 NC_010002.1 PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: ajs:Ajs_0639 heat shock protein DnaJ domain protein; heat shock protein DnaJ domain-containing protein 3288509 5748568 Daci_2984 Delftia acidovorans SPH-1 heat shock protein DnaJ domain-containing protein YP_001564007.1 3287514 R 398578 CDS YP_001564008.1 160898426 5748569 3288678..3289523 1 NC_010002.1 KEGG: aav:Aave_3388 cytochrome c553-like protein; cytochrome c553-like protein 3289523 5748569 Daci_2985 Delftia acidovorans SPH-1 cytochrome c553-like protein YP_001564008.1 3288678 D 398578 CDS YP_001564009.1 160898427 5748570 3289520..3290863 1 NC_010002.1 PFAM: cytochrome c class I; KEGG: aav:Aave_3387 cytochrome c, class I; gluconate 2-dehydrogenase 3290863 5748570 Daci_2986 Delftia acidovorans SPH-1 gluconate 2-dehydrogenase YP_001564009.1 3289520 D 398578 CDS YP_001564010.1 160898428 5748571 3290873..3291274 1 NC_010002.1 PFAM: Thioredoxin domain; KEGG: aav:Aave_3386 hypothetical protein; thioredoxin domain-containing protein 3291274 5748571 Daci_2987 Delftia acidovorans SPH-1 thioredoxin domain-containing protein YP_001564010.1 3290873 D 398578 CDS YP_001564011.1 160898429 5748572 3291540..3292118 1 NC_010002.1 PFAM: protein of unknown function DUF150; KEGG: aav:Aave_3385 protein of unknown function DUF150; hypothetical protein 3292118 5748572 Daci_2988 Delftia acidovorans SPH-1 hypothetical protein YP_001564011.1 3291540 D 398578 CDS YP_001564012.1 160898430 5748573 3292206..3293693 1 NC_010002.1 KEGG: aav:Aave_3384 NusA antitermination factor; TIGRFAM: transcription termination factor NusA; PFAM: RNA binding S1 domain protein; KH type 1 domain protein; NusA domain protein; SMART: KH domain protein; NusA antitermination factor 3293693 5748573 Daci_2989 Delftia acidovorans SPH-1 NusA antitermination factor YP_001564012.1 3292206 D 398578 CDS YP_001564013.1 160898431 5748574 3293717..3296578 1 NC_010002.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 3296578 infB 5748574 infB Delftia acidovorans SPH-1 translation initiation factor IF-2 YP_001564013.1 3293717 D 398578 CDS YP_001564014.1 160898432 5748575 3296585..3296956 1 NC_010002.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 3296956 rbfA 5748575 rbfA Delftia acidovorans SPH-1 ribosome-binding factor A YP_001564014.1 3296585 D 398578 CDS YP_001564015.1 160898433 5748576 3296961..3297926 1 NC_010002.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 3297926 truB 5748576 truB Delftia acidovorans SPH-1 tRNA pseudouridine synthase B YP_001564015.1 3296961 D 398578 CDS YP_001564016.1 160898434 5748577 3297950..3299776 1 NC_010002.1 TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: ajs:Ajs_2558 GTP-binding protein TypA; GTP-binding protein TypA 3299776 5748577 Daci_2993 Delftia acidovorans SPH-1 GTP-binding protein TypA YP_001564016.1 3297950 D 398578 CDS YP_001564017.1 160898435 5748578 complement(3299931..3300818) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_B0708 transcriptional regulator, LysR-family; LysR family transcriptional regulator 3300818 5748578 Daci_2994 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001564017.1 3299931 R 398578 CDS YP_001564018.1 160898436 5748579 3300902..3302098 1 NC_010002.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: ajs:Ajs_0058 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 3302098 5748579 Daci_2995 Delftia acidovorans SPH-1 L-carnitine dehydratase/bile acid-inducible protein F YP_001564018.1 3300902 D 398578 CDS YP_001564019.1 160898437 5748580 3302100..3302597 1 NC_010002.1 KEGG: ajs:Ajs_0059 hypothetical protein; hypothetical protein 3302597 5748580 Daci_2996 Delftia acidovorans SPH-1 hypothetical protein YP_001564019.1 3302100 D 398578 CDS YP_001564020.1 160898438 5748581 3302640..3303671 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0060 uncharacterized protein UPF0065; hypothetical protein 3303671 5748581 Daci_2997 Delftia acidovorans SPH-1 hypothetical protein YP_001564020.1 3302640 D 398578 CDS YP_001564021.1 160898439 5748582 3303814..3304905 1 NC_010002.1 catalyzes the formation of 3-hydroxy-2-methylpropanoate from 3-hydroxy-2-methylpropanoyl-CoA; 3-hydroxyisobutyryl-CoA hydrolase 3304905 5748582 Daci_2998 Delftia acidovorans SPH-1 3-hydroxyisobutyryl-CoA hydrolase YP_001564021.1 3303814 D 398578 CDS YP_001564022.1 160898440 5748583 complement(3304972..3305694) 1 NC_010002.1 PFAM: regulatory protein TetR; KEGG: asa:ASA_1100 transcriptional regulator, TetR family; TetR family transcriptional regulator 3305694 5748583 Daci_2999 Delftia acidovorans SPH-1 TetR family transcriptional regulator YP_001564022.1 3304972 R 398578 CDS YP_001564023.1 160898441 5748584 3305794..3306489 1 NC_010002.1 KEGG: asa:ASA_1101 hypothetical protein; hypothetical protein 3306489 5748584 Daci_3000 Delftia acidovorans SPH-1 hypothetical protein YP_001564023.1 3305794 D 398578 CDS YP_001564024.1 160898442 5748585 complement(3306505..3307344) 1 NC_010002.1 KEGG: ajs:Ajs_2555 putative transmembrane anti-sigma factor; putative transmembrane anti-sigma factor 3307344 5748585 Daci_3001 Delftia acidovorans SPH-1 putative transmembrane anti-sigma factor YP_001564024.1 3306505 R 398578 CDS YP_001564025.1 160898443 5748586 complement(3307355..3307930) 1 NC_010002.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: ajs:Ajs_2554 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 3307930 5748586 Daci_3002 Delftia acidovorans SPH-1 ECF subfamily RNA polymerase sigma-24 factor YP_001564025.1 3307355 R 398578 CDS YP_001564026.1 160898444 5748587 complement(3307961..3308377) 1 NC_010002.1 PFAM: Secreted repeat of unknown function; KEGG: ajs:Ajs_2553 secreted repeat of unknown function; hypothetical protein 3308377 5748587 Daci_3003 Delftia acidovorans SPH-1 hypothetical protein YP_001564026.1 3307961 R 398578 CDS YP_001564027.1 160898445 5748588 complement(3308487..3309008) 1 NC_010002.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 3309008 smpB 5748588 smpB Delftia acidovorans SPH-1 SsrA-binding protein YP_001564027.1 3308487 R 398578 CDS YP_001564028.1 160898446 5748589 3309075..3309581 1 NC_010002.1 PFAM: cyclase/dehydrase; KEGG: aav:Aave_3373 cyclase/dehydrase; cyclase/dehydrase 3309581 5748589 Daci_3005 Delftia acidovorans SPH-1 cyclase/dehydrase YP_001564028.1 3309075 D 398578 CDS YP_001564029.1 160898447 5748590 3309574..3309918 1 NC_010002.1 PFAM: protein of unknown function UPF0125; KEGG: aav:Aave_3372 protein of unknown function UPF0125; hypothetical protein 3309918 5748590 Daci_3006 Delftia acidovorans SPH-1 hypothetical protein YP_001564029.1 3309574 D 398578 CDS YP_001564030.1 160898448 5748591 complement(3309931..3310485) 1 NC_010002.1 KEGG: ajs:Ajs_2549 hypothetical protein; hypothetical protein 3310485 5748591 Daci_3007 Delftia acidovorans SPH-1 hypothetical protein YP_001564030.1 3309931 R 398578 CDS YP_001564031.1 160898449 5748592 3310622..3312097 1 NC_010002.1 KEGG: ajs:Ajs_2548 inosine-5'-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain containing protein; IMP dehydrogenase/GMP reductase; 2-nitropropane dioxygenase NPD; inosine-5'-monophosphate dehydrogenase 3312097 5748592 Daci_3008 Delftia acidovorans SPH-1 inosine-5'-monophosphate dehydrogenase YP_001564031.1 3310622 D 398578 CDS YP_001564032.1 160898450 5748593 complement(3312187..3313881) 1 NC_010002.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 3313881 5748593 Daci_3009 Delftia acidovorans SPH-1 dihydroxy-acid dehydratase YP_001564032.1 3312187 R 398578 CDS YP_001564033.1 160898451 5748594 3313975..3314904 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rfr:Rfer_1922 transcriptional regulator, LysR family; LysR family transcriptional regulator 3314904 5748594 Daci_3010 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001564033.1 3313975 D 398578 CDS YP_001564034.1 160898452 5748595 3315045..3315323 1 NC_010002.1 TIGRFAM: prevent-host-death family protein; KEGG: aav:Aave_3369 prevent-host-death family protein; prevent-host-death family protein 3315323 5748595 Daci_3011 Delftia acidovorans SPH-1 prevent-host-death family protein YP_001564034.1 3315045 D 398578 CDS YP_001564035.1 160898453 5748596 3315320..3315754 1 NC_010002.1 KEGG: aav:Aave_3368 hypothetical protein; hypothetical protein 3315754 5748596 Daci_3012 Delftia acidovorans SPH-1 hypothetical protein YP_001564035.1 3315320 D 398578 CDS YP_001564036.1 160898454 5748597 3315780..3317402 1 NC_010002.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 3317402 guaA 5748597 guaA Delftia acidovorans SPH-1 GMP synthase YP_001564036.1 3315780 D 398578 CDS YP_001564037.1 160898455 5748598 complement(3317569..3317796) 1 NC_010002.1 hypothetical protein 3317796 5748598 Daci_3014 Delftia acidovorans SPH-1 hypothetical protein YP_001564037.1 3317569 R 398578 CDS YP_001564038.1 160898456 5748599 3318222..3319556 1 NC_010002.1 PFAM: peptidase M16 domain protein; KEGG: aav:Aave_3753 peptidase M16 domain protein; peptidase M16 domain-containing protein 3319556 5748599 Daci_3015 Delftia acidovorans SPH-1 peptidase M16 domain-containing protein YP_001564038.1 3318222 D 398578 CDS YP_001564039.1 160898457 5748600 complement(3319624..3320043) 1 NC_010002.1 hypothetical protein 3320043 5748600 Daci_3016 Delftia acidovorans SPH-1 hypothetical protein YP_001564039.1 3319624 R 398578 CDS YP_001564040.1 160898458 5748601 complement(3320056..3321036) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0462 uncharacterized protein UPF0065; hypothetical protein 3321036 5748601 Daci_3017 Delftia acidovorans SPH-1 hypothetical protein YP_001564040.1 3320056 R 398578 CDS YP_001564041.1 160898459 5748602 3321136..3322086 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_0139 transcriptional regulator, LysR family; LysR family transcriptional regulator 3322086 5748602 Daci_3018 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001564041.1 3321136 D 398578 CDS YP_001564042.1 160898460 5748603 complement(3322142..3322441) 1 NC_010002.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: kpn:KPN_04023 hypothetical protein; antibiotic biosynthesis monooxygenase 3322441 5748603 Daci_3019 Delftia acidovorans SPH-1 antibiotic biosynthesis monooxygenase YP_001564042.1 3322142 R 398578 CDS YP_001564043.1 160898461 5748604 complement(3322445..3323464) 1 NC_010002.1 TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: gvi:gll2260 probable oxidoreductase; zinc-binding alcohol dehydrogenase family protein 3323464 5748604 Daci_3020 Delftia acidovorans SPH-1 zinc-binding alcohol dehydrogenase family protein YP_001564043.1 3322445 R 398578 CDS YP_001564044.1 160898462 5748605 complement(3323524..3324630) 1 NC_010002.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: cvi:CV_2245 flavoprotein NADH-dependent oxidoreductase; NADH:flavin oxidoreductase 3324630 5748605 Daci_3021 Delftia acidovorans SPH-1 NADH:flavin oxidoreductase YP_001564044.1 3323524 R 398578 CDS YP_001564045.1 160898463 5748606 3324851..3325411 1 NC_010002.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: ajs:Ajs_2025 bifunctional deaminase-reductase domain protein; deaminase-reductase domain-containing protein 3325411 5748606 Daci_3022 Delftia acidovorans SPH-1 deaminase-reductase domain-containing protein YP_001564045.1 3324851 D 398578 CDS YP_001564046.1 160898464 5748607 complement(3325441..3326496) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bbr:BB4796 LysR-family transcriptional regulator; LysR family transcriptional regulator 3326496 5748607 Daci_3023 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001564046.1 3325441 R 398578 CDS YP_001564047.1 160898465 5748608 complement(3326524..3328038) 1 NC_010002.1 PFAM: 4-hydroxyphenylacetate 3-hydroxylase; KEGG: rha:RHA1_ro01782 probable 4-hydroxyphenylacetic hydroxylase; 4-hydroxyphenylacetate 3-hydroxylase 3328038 5748608 Daci_3024 Delftia acidovorans SPH-1 4-hydroxyphenylacetate 3-hydroxylase YP_001564047.1 3326524 R 398578 CDS YP_001564048.1 160898466 5748609 complement(3328038..3329186) 1 NC_010002.1 PFAM: Extracellular ligand-binding receptor; KEGG: pol:Bpro_3336 extracellular ligand-binding receptor; extracellular ligand-binding receptor 3329186 5748609 Daci_3025 Delftia acidovorans SPH-1 extracellular ligand-binding receptor YP_001564048.1 3328038 R 398578 CDS YP_001564049.1 160898467 5748610 3329473..3330390 1 NC_010002.1 PFAM: inner-membrane translocator; KEGG: pol:Bpro_3335 inner-membrane translocator; inner-membrane translocator 3330390 5748610 Daci_3026 Delftia acidovorans SPH-1 inner-membrane translocator YP_001564049.1 3329473 D 398578 CDS YP_001564050.1 160898468 5748611 3330390..3331571 1 NC_010002.1 PFAM: inner-membrane translocator; KEGG: maq:Maqu_3337 inner-membrane translocator; inner-membrane translocator 3331571 5748611 Daci_3027 Delftia acidovorans SPH-1 inner-membrane translocator YP_001564050.1 3330390 D 398578 CDS YP_001564051.1 160898469 5748612 3331561..3332397 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tth:TTC0969 branched-chain amino acid transport ATP-binding protein livG; ABC transporter-like protein 3332397 5748612 Daci_3028 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001564051.1 3331561 D 398578 CDS YP_001564052.1 160898470 5748613 3332390..3333088 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tma:TM1139 branched-chain amino acid transport system ATP-binding protein; ABC transporter-like protein 3333088 5748613 Daci_3029 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001564052.1 3332390 D 398578 CDS YP_001564053.1 160898471 5748614 3333204..3334487 1 NC_010002.1 KEGG: pap:PSPA7_6179 hypothetical protein; hypothetical protein 3334487 5748614 Daci_3030 Delftia acidovorans SPH-1 hypothetical protein YP_001564053.1 3333204 D 398578 CDS YP_001564054.1 160898472 5748615 3334541..3334975 1 NC_010002.1 PFAM: Endoribonuclease L-PSP; KEGG: pap:PSPA7_6178 hypothetical protein; endoribonuclease L-PSP 3334975 5748615 Daci_3031 Delftia acidovorans SPH-1 endoribonuclease L-PSP YP_001564054.1 3334541 D 398578 CDS YP_001564055.1 160898473 5748616 3335029..3335706 1 NC_010002.1 PFAM: protein of unknown function DUF1028; KEGG: bxe:Bxe_A3464 hypothetical protein; hypothetical protein 3335706 5748616 Daci_3032 Delftia acidovorans SPH-1 hypothetical protein YP_001564055.1 3335029 D 398578 CDS YP_001564056.1 160898474 5748617 complement(3335740..3336657) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_A1196 transcriptional regulator, LysR-family; LysR family transcriptional regulator 3336657 5748617 Daci_3033 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001564056.1 3335740 R 398578 CDS YP_001564057.1 160898475 5748618 3336752..3337993 1 NC_010002.1 PFAM: beta-lactamase; KEGG: reh:H16_A1195 beta-lactamase; beta-lactamase 3337993 5748618 Daci_3034 Delftia acidovorans SPH-1 beta-lactamase YP_001564057.1 3336752 D 398578 CDS YP_001564058.1 160898476 5748619 3337990..3339162 1 NC_010002.1 PFAM: major facilitator superfamily MFS_1; KEGG: spc:Sputcn32_1816 major facilitator superfamily MFS_1; major facilitator transporter 3339162 5748619 Daci_3035 Delftia acidovorans SPH-1 major facilitator transporter YP_001564058.1 3337990 D 398578 CDS YP_001564059.1 160898477 5748620 complement(3339191..3341467) 1 NC_010002.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; KEGG: aav:Aave_2925 response regulator receiver modulated diguanylate cyclase/phosphodiesterase; response regulator receiver modulated diguanylate cyclase/phosphodiesterase 3341467 5748620 Daci_3036 Delftia acidovorans SPH-1 response regulator receiver modulated diguanylate cyclase/phosphodiesterase YP_001564059.1 3339191 R 398578 CDS YP_001564060.1 160898478 5748621 complement(3341496..3342236) 1 NC_010002.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: aav:Aave_2926 diguanylate cyclase; diguanylate cyclase 3342236 5748621 Daci_3037 Delftia acidovorans SPH-1 diguanylate cyclase YP_001564060.1 3341496 R 398578 CDS YP_001564061.1 160898479 5748622 complement(3342236..3342637) 1 NC_010002.1 KEGG: aav:Aave_2927 putative lipoprotein; putative lipoprotein 3342637 5748622 Daci_3038 Delftia acidovorans SPH-1 putative lipoprotein YP_001564061.1 3342236 R 398578 CDS YP_001564062.1 160898480 5748623 complement(3342706..3343287) 1 NC_010002.1 KEGG: aav:Aave_2928 hypothetical protein; hypothetical protein 3343287 5748623 Daci_3039 Delftia acidovorans SPH-1 hypothetical protein YP_001564062.1 3342706 R 398578 CDS YP_001564063.1 160898481 5748624 complement(3343288..3344520) 1 NC_010002.1 PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: aav:Aave_2929 serine phosphatase; protein serine/threonine phosphatase 3344520 5748624 Daci_3040 Delftia acidovorans SPH-1 protein serine/threonine phosphatase YP_001564063.1 3343288 R 398578 CDS YP_001564064.1 160898482 5748625 3344667..3345668 1 NC_010002.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: bur:Bcep18194_B2065 taurine dioxygenase; taurine dioxygenase 3345668 5748625 Daci_3041 Delftia acidovorans SPH-1 taurine dioxygenase YP_001564064.1 3344667 D 398578 CDS YP_001564065.1 160898483 5748626 complement(3345678..3345935) 1 NC_010002.1 KEGG: aav:Aave_3397 hypothetical protein; hypothetical protein 3345935 5748626 Daci_3042 Delftia acidovorans SPH-1 hypothetical protein YP_001564065.1 3345678 R 398578 CDS YP_001564066.1 160898484 5748627 3346125..3347165 1 NC_010002.1 KEGG: aav:Aave_0374 putative mRNA 3-end processing factor; putative mRNA 3-end processing factor 3347165 5748627 Daci_3043 Delftia acidovorans SPH-1 putative mRNA 3-end processing factor YP_001564066.1 3346125 D 398578 CDS YP_001564067.1 160898485 5748628 3347162..3348853 1 NC_010002.1 catalyzes the ATP-dependent formation of a phosphodiester at the site of a single strand break in duplex DNA; ATP-dependent DNA ligase 3348853 5748628 Daci_3044 Delftia acidovorans SPH-1 ATP-dependent DNA ligase YP_001564067.1 3347162 D 398578 CDS YP_001564068.1 160898486 5748629 3348909..3351809 1 NC_010002.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein; SMART: DEAD-like helicases; KEGG: aav:Aave_0376 DEAD/H associated domain protein; DEAD/DEAH box helicase 3351809 5748629 Daci_3045 Delftia acidovorans SPH-1 DEAD/DEAH box helicase YP_001564068.1 3348909 D 398578 CDS YP_001564069.1 160898487 5748630 3351826..3352545 1 NC_010002.1 KEGG: aav:Aave_0377 metallophosphoesterase; metallophosphoesterase 3352545 5748630 Daci_3046 Delftia acidovorans SPH-1 metallophosphoesterase YP_001564069.1 3351826 D 398578 CDS YP_001564070.1 160898488 5748631 3352654..3353271 1 NC_010002.1 KEGG: bam:Bamb_4262 hypothetical protein; hypothetical protein 3353271 5748631 Daci_3047 Delftia acidovorans SPH-1 hypothetical protein YP_001564070.1 3352654 D 398578 CDS YP_001564071.1 160898489 5748632 3353418..3354461 1 NC_010002.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: mms:mma_2655 cation transporter (MIT family); Mg2 transporter protein CorA family protein 3354461 5748632 Daci_3048 Delftia acidovorans SPH-1 Mg2 transporter protein CorA family protein YP_001564071.1 3353418 D 398578 CDS YP_001564072.1 160898490 5748633 complement(3354465..3355979) 1 NC_010002.1 PFAM: protein of unknown function DUF112 transmembrane; KEGG: rme:Rmet_5627 protein of unknown function DUF112, transmembrane; hypothetical protein 3355979 5748633 Daci_3049 Delftia acidovorans SPH-1 hypothetical protein YP_001564072.1 3354465 R 398578 CDS YP_001564073.1 160898491 5748634 complement(3356007..3356597) 1 NC_010002.1 KEGG: mms:mma_0439 small permease component of tripartite tricarboxylate transporter; small permease of tripartite tricarboxylate transporter 3356597 5748634 Daci_3050 Delftia acidovorans SPH-1 small permease of tripartite tricarboxylate transporter YP_001564073.1 3356007 R 398578 CDS YP_001564074.1 160898492 5748635 complement(3356609..3357646) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: rme:Rmet_5629 uncharacterized protein UPF0065; hypothetical protein 3357646 5748635 Daci_3051 Delftia acidovorans SPH-1 hypothetical protein YP_001564074.1 3356609 R 398578 CDS YP_001564075.1 160898493 5748636 complement(3357752..3358993) 1 NC_010002.1 PFAM: aminotransferase class V; KEGG: pol:Bpro_2753 aminotransferase, class V; serine--glyoxylate transaminase 3358993 5748636 Daci_3052 Delftia acidovorans SPH-1 serine--glyoxylate transaminase YP_001564075.1 3357752 R 398578 CDS YP_001564076.1 160898494 5748637 3359152..3359841 1 NC_010002.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pol:Bpro_2754 transcriptional regulator, GntR family; GntR family transcriptional regulator 3359841 5748637 Daci_3053 Delftia acidovorans SPH-1 GntR family transcriptional regulator YP_001564076.1 3359152 D 398578 CDS YP_001564077.1 160898495 5748638 3359838..3362936 1 NC_010002.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; FAD linked oxidase domain protein; KEGG: pol:Bpro_2755 D-lactate dehydrogenase (cytochrome); D-lactate dehydrogenase 3362936 5748638 Daci_3054 Delftia acidovorans SPH-1 D-lactate dehydrogenase YP_001564077.1 3359838 D 398578 CDS YP_001564078.1 160898496 5748639 3362974..3363390 1 NC_010002.1 PFAM: protein of unknown function DUF336; KEGG: ajs:Ajs_2410 protein of unknown function DUF336; hypothetical protein 3363390 5748639 Daci_3055 Delftia acidovorans SPH-1 hypothetical protein YP_001564078.1 3362974 D 398578 CDS YP_001564079.1 160898497 5748640 complement(3363415..3364872) 1 NC_010002.1 PFAM: outer membrane efflux protein; KEGG: pau:PA14_10330 putative outer membrane protein precursor; outer membrane efflux protein 3364872 5748640 Daci_3056 Delftia acidovorans SPH-1 outer membrane efflux protein YP_001564079.1 3363415 R 398578 CDS YP_001564080.1 160898498 5748641 complement(3364869..3366920) 1 NC_010002.1 PFAM: ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase; KEGG: xom:XOO_1681 colicin V secretion ABC transporter ATP-binding protein; ABC transporter-like protein 3366920 5748641 Daci_3057 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001564080.1 3364869 R 398578 CDS YP_001564081.1 160898499 5748642 complement(3366956..3368467) 1 NC_010002.1 KEGG: rbe:RBE_0376 hypothetical protein; hypothetical protein 3368467 5748642 Daci_3058 Delftia acidovorans SPH-1 hypothetical protein YP_001564081.1 3366956 R 398578 CDS YP_001564082.1 160898500 5748643 complement(3368497..3369393) 1 NC_010002.1 PFAM: Cupin 4 family protein; SMART: transcription factor jumonji jmjC domain protein; KEGG: nmc:NMC0891 hypothetical protein; cupin 4 family protein 3369393 5748643 Daci_3059 Delftia acidovorans SPH-1 cupin 4 family protein YP_001564082.1 3368497 R 398578 CDS YP_001564083.1 160898501 5748644 complement(3369390..3370409) 1 NC_010002.1 PFAM: Radical SAM domain protein; KEGG: rpc:RPC_3241 radical SAM; radical SAM domain-containing protein 3370409 5748644 Daci_3060 Delftia acidovorans SPH-1 radical SAM domain-containing protein YP_001564083.1 3369390 R 398578 CDS YP_001564084.1 160898502 5748645 complement(3370769..3372043) 1 NC_010002.1 PFAM: secretion protein HlyD family protein; KEGG: mpt:Mpe_A3794 membrane-fusion protein; secretion protein HlyD family protein 3372043 5748645 Daci_3061 Delftia acidovorans SPH-1 secretion protein HlyD family protein YP_001564084.1 3370769 R 398578 CDS YP_001564085.1 160898503 5748646 complement(3372335..3373021) 1 NC_010002.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pol:Bpro_2754 transcriptional regulator, GntR family; GntR family transcriptional regulator 3373021 5748646 Daci_3062 Delftia acidovorans SPH-1 GntR family transcriptional regulator YP_001564085.1 3372335 R 398578 CDS YP_001564086.1 160898504 5748647 3373096..3374199 1 NC_010002.1 PFAM: transglutaminase domain protein; KEGG: aav:Aave_3990 transglutaminase domain protein; transglutaminase domain-containing protein 3374199 5748647 Daci_3063 Delftia acidovorans SPH-1 transglutaminase domain-containing protein YP_001564086.1 3373096 D 398578 CDS YP_001564087.1 160898505 5748648 complement(3374236..3376395) 1 NC_010002.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: aav:Aave_1367 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 3376395 5748648 Daci_3064 Delftia acidovorans SPH-1 TonB-dependent siderophore receptor YP_001564087.1 3374236 R 398578 CDS YP_001564088.1 160898506 5748649 complement(3376716..3377441) 1 NC_010002.1 KEGG: ret:RHE_CH02944 hypothetical protein; hypothetical protein 3377441 5748649 Daci_3065 Delftia acidovorans SPH-1 hypothetical protein YP_001564088.1 3376716 R 398578 CDS YP_001564089.1 160898507 5748650 complement(3377487..3378314) 1 NC_010002.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: rme:Rmet_0007 transcriptional regulator, AraC family; AraC family transcriptional regulator 3378314 5748650 Daci_3066 Delftia acidovorans SPH-1 AraC family transcriptional regulator YP_001564089.1 3377487 R 398578 CDS YP_001564090.1 160898508 5748651 complement(3378328..3379686) 1 NC_010002.1 TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: mpt:Mpe_A2526 CHR transporter; chromate transporter 3379686 5748651 Daci_3067 Delftia acidovorans SPH-1 chromate transporter YP_001564090.1 3378328 R 398578 CDS YP_001564091.1 160898509 5748652 complement(3379782..3380531) 1 NC_010002.1 TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; KEGG: ret:RHE_PE00011 peptide methionine sulfoxide reductase protein; peptide methionine sulfoxide reductase 3380531 5748652 Daci_3068 Delftia acidovorans SPH-1 peptide methionine sulfoxide reductase YP_001564091.1 3379782 R 398578 CDS YP_001564092.1 160898510 5748653 complement(3380566..3382395) 1 NC_010002.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; cytochrome c biogenesis protein transmembrane region; Redoxin domain protein; KEGG: bch:Bcen2424_6244 cytochrome c biogenesis protein, transmembrane region; alkyl hydroperoxide reductase 3382395 5748653 Daci_3069 Delftia acidovorans SPH-1 alkyl hydroperoxide reductase YP_001564092.1 3380566 R 398578 CDS YP_001564093.1 160898511 5748654 complement(3382412..3382912) 1 NC_010002.1 TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; KEGG: bra:BRADO5066 peptide methionine sulfoxide reductase MsrB; methionine-R-sulfoxide reductase 3382912 5748654 Daci_3070 Delftia acidovorans SPH-1 methionine-R-sulfoxide reductase YP_001564093.1 3382412 R 398578 CDS YP_001564094.1 160898512 5748655 3383080..3383796 1 NC_010002.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bur:Bcep18194_C6809 two component transcriptional regulator, winged helix family; two component transcriptional regulator 3383796 5748655 Daci_3071 Delftia acidovorans SPH-1 two component transcriptional regulator YP_001564094.1 3383080 D 398578 CDS YP_001564095.1 160898513 5748656 3383798..3385303 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bam:Bamb_5784 periplasmic sensor signal transduction histidine kinase; histidine kinase 3385303 5748656 Daci_3072 Delftia acidovorans SPH-1 histidine kinase YP_001564095.1 3383798 D 398578 CDS YP_001564096.1 160898514 5748657 3385392..3387110 1 NC_010002.1 PFAM: ferredoxin-dependent glutamate synthase; KEGG: mpt:Mpe_A3620 putative glutamate synthase; ferredoxin-dependent glutamate synthase 3387110 5748657 Daci_3073 Delftia acidovorans SPH-1 ferredoxin-dependent glutamate synthase YP_001564096.1 3385392 D 398578 CDS YP_001564097.1 160898515 5748658 3387225..3387503 1 NC_010002.1 KEGG: reh:H16_B1678 hypothetical protein; hypothetical protein 3387503 5748658 Daci_3074 Delftia acidovorans SPH-1 hypothetical protein YP_001564097.1 3387225 D 398578 CDS YP_001564098.1 160898516 5748659 3387521..3389194 1 NC_010002.1 PFAM: PepSY-associated TM helix domain protein; KEGG: reh:H16_B1677 iron regulated protein; PepSY-associated TM helix domain-containing protein 3389194 5748659 Daci_3075 Delftia acidovorans SPH-1 PepSY-associated TM helix domain-containing protein YP_001564098.1 3387521 D 398578 CDS YP_001564099.1 160898517 5748660 3389187..3389504 1 NC_010002.1 KEGG: sbm:Shew185_4236 hypothetical protein; hypothetical protein 3389504 5748660 Daci_3076 Delftia acidovorans SPH-1 hypothetical protein YP_001564099.1 3389187 D 398578 CDS YP_001564100.1 160898518 5748661 complement(3389539..3391806) 1 NC_010002.1 KEGG: rca:Rcas_3732 parallel beta-helix repeat; hypothetical protein 3391806 5748661 Daci_3077 Delftia acidovorans SPH-1 hypothetical protein YP_001564100.1 3389539 R 398578 CDS YP_001564101.1 160898519 5748662 3392245..3394569 1 NC_010002.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pfl:PFL_3635 sensor histidine kinase/response regulator; histidine kinase 3394569 5748662 Daci_3078 Delftia acidovorans SPH-1 histidine kinase YP_001564101.1 3392245 D 398578 CDS YP_001564102.1 160898520 5748663 3394574..3395785 1 NC_010002.1 PFAM: EAL domain protein; response regulator receiver; KEGG: pfl:PFL_3636 response regulator/EAL domain protein; response regulator receiver modulated diguanylate phosphodiesterase 3395785 5748663 Daci_3079 Delftia acidovorans SPH-1 response regulator receiver modulated diguanylate phosphodiesterase YP_001564102.1 3394574 D 398578 CDS YP_001564103.1 160898521 5748664 3395806..3399072 1 NC_010002.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pfl:PFL_3637 sensor histidine kinase/response regulator; histidine kinase 3399072 5748664 Daci_3080 Delftia acidovorans SPH-1 histidine kinase YP_001564103.1 3395806 D 398578 CDS YP_001564104.1 160898522 5748665 3399091..3399744 1 NC_010002.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: mms:mma_0618 positive response regulator for colanic capsule biosynthesis; two component LuxR family transcriptional regulator 3399744 5748665 Daci_3081 Delftia acidovorans SPH-1 two component LuxR family transcriptional regulator YP_001564104.1 3399091 D 398578 CDS YP_001564105.1 160898523 5748666 complement(3399770..3400015) 1 NC_010002.1 hypothetical protein 3400015 5748666 Daci_3082 Delftia acidovorans SPH-1 hypothetical protein YP_001564105.1 3399770 R 398578 CDS YP_001564106.1 160898524 5748667 complement(3400009..3400389) 1 NC_010002.1 hypothetical protein 3400389 5748667 Daci_3083 Delftia acidovorans SPH-1 hypothetical protein YP_001564106.1 3400009 R 398578 CDS YP_001564107.1 160898525 5748668 3400521..3402680 1 NC_010002.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: rso:RSc3136 putative methyl-accepting chemotaxis transmembrane protein; methyl-accepting chemotaxis sensory transducer 3402680 5748668 Daci_3084 Delftia acidovorans SPH-1 methyl-accepting chemotaxis sensory transducer YP_001564107.1 3400521 D 398578 CDS YP_001564108.1 160898526 5748669 3402814..3403098 1 NC_010002.1 KEGG: pae:PA0092 hypothetical protein; hypothetical protein 3403098 5748669 Daci_3085 Delftia acidovorans SPH-1 hypothetical protein YP_001564108.1 3402814 D 398578 CDS YP_001564109.1 160898527 5748670 complement(3403138..3403797) 1 NC_010002.1 hypothetical protein 3403797 5748670 Daci_3086 Delftia acidovorans SPH-1 hypothetical protein YP_001564109.1 3403138 R 398578 CDS YP_001564110.1 160898528 5748671 complement(3403907..3404860) 1 NC_010002.1 PFAM: BRO domain protein; KEGG: stp:Strop_4013 BRO domain protein domain protein; prophage antirepressor 3404860 5748671 Daci_3087 Delftia acidovorans SPH-1 prophage antirepressor YP_001564110.1 3403907 R 398578 CDS YP_001564111.1 160898529 5748672 3405759..3407420 1 NC_010002.1 KEGG: sal:Sala_1435 hypothetical protein; hypothetical protein 3407420 5748672 Daci_3088 Delftia acidovorans SPH-1 hypothetical protein YP_001564111.1 3405759 D 398578 CDS YP_001564112.1 160898530 5748673 3408065..3408754 1 NC_010002.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: hsa:84000 transmembrane protease, serine 13; peptidase S1 and S6 chymotrypsin/Hap 3408754 5748673 Daci_3089 Delftia acidovorans SPH-1 peptidase S1 and S6 chymotrypsin/Hap YP_001564112.1 3408065 D 398578 CDS YP_001564113.1 160898531 5748674 3409778..3410221 1 NC_010002.1 PFAM: transposase IS3/IS911 family protein; KEGG: pna:Pnap_4532 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 3410221 5748674 Daci_3090 Delftia acidovorans SPH-1 transposase IS3/IS911 family protein YP_001564113.1 3409778 D 398578 CDS YP_001564114.1 160898532 5748675 3410197..3410547 1 NC_010002.1 PFAM: IS66 Orf2 family protein; KEGG: reu:Reut_C6378 IS66 Orf2 like; IS66 Orf2 family protein 3410547 5748675 Daci_3091 Delftia acidovorans SPH-1 IS66 Orf2 family protein YP_001564114.1 3410197 D 398578 CDS YP_001564115.1 160898533 5748676 3410649..3412244 1 NC_010002.1 PFAM: transposase IS66; KEGG: pna:Pnap_2521 transposase IS66; transposase IS66 3412244 5748676 Daci_3092 Delftia acidovorans SPH-1 transposase IS66 YP_001564115.1 3410649 D 398578 CDS YP_001564116.1 160898534 5748677 complement(3412278..3413081) 1 NC_010002.1 TIGRFAM: yecA family protein; PFAM: SEC-C motif domain protein; KEGG: bvi:Bcep1808_2979 YecA family protein; yecA family protein 3413081 5748677 Daci_3093 Delftia acidovorans SPH-1 yecA family protein YP_001564116.1 3412278 R 398578 CDS YP_001564117.1 160898535 5748678 complement(3413273..3413611) 1 NC_010002.1 KEGG: aav:Aave_3790 transposase, IS4 family protein; transposase, IS4 family protein 3413611 5748678 Daci_3094 Delftia acidovorans SPH-1 transposase, IS4 family protein YP_001564117.1 3413273 R 398578 CDS YP_001564118.1 160898536 5748679 complement(3413671..3414096) 1 NC_010002.1 KEGG: aav:Aave_3789 putative TIS1421-transposase orfA protein; putative TIS1421-transposase orfA protein 3414096 5748679 Daci_3095 Delftia acidovorans SPH-1 putative TIS1421-transposase orfA protein YP_001564118.1 3413671 R 398578 CDS YP_001564119.1 160898537 5748680 3414557..3415249 1 NC_010002.1 PFAM: protein of unknown function DUF1353; KEGG: sse:Ssed_2204 hypothetical protein; hypothetical protein 3415249 5748680 Daci_3096 Delftia acidovorans SPH-1 hypothetical protein YP_001564119.1 3414557 D 398578 CDS YP_001564120.1 160898538 5748681 3415320..3416198 1 NC_010002.1 PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: net:Neut_1623 N-acetylmuramoyl-L-alanine amidase, family 2; N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD 3416198 5748681 Daci_3097 Delftia acidovorans SPH-1 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD YP_001564120.1 3415320 D 398578 CDS YP_001564121.1 160898539 5748682 3416287..3416580 1 NC_010002.1 hypothetical protein 3416580 5748682 Daci_3098 Delftia acidovorans SPH-1 hypothetical protein YP_001564121.1 3416287 D 398578 CDS YP_001564122.1 160898540 5748683 complement(3417017..3417997) 1 NC_010002.1 PFAM: helix-turn-helix- domain containing protein AraC type; transcription activator effector binding; KEGG: pfl:PFL_1558 transcriptional regulator, AraC family; AraC family transcriptional regulator 3417997 5748683 Daci_3099 Delftia acidovorans SPH-1 AraC family transcriptional regulator YP_001564122.1 3417017 R 398578 CDS YP_001564123.1 160898541 5748684 complement(3418089..3418412) 1 NC_010002.1 PFAM: helix-turn-helix HxlR type; KEGG: bch:Bcen2424_3397 transcriptional regulator, HxlR family; HxlR family transcriptional regulator 3418412 5748684 Daci_3100 Delftia acidovorans SPH-1 HxlR family transcriptional regulator YP_001564123.1 3418089 R 398578 CDS YP_001564124.1 160898542 5748685 3418563..3419195 1 NC_010002.1 PFAM: Glutathione S-transferase domain; KEGG: reh:H16_B0451 glutathione S-transferase; glutathione S-transferase domain-containing protein 3419195 5748685 Daci_3101 Delftia acidovorans SPH-1 glutathione S-transferase domain-containing protein YP_001564124.1 3418563 D 398578 CDS YP_001564125.1 160898543 5748686 complement(3419327..3420337) 1 NC_010002.1 hypothetical protein 3420337 5748686 Daci_3102 Delftia acidovorans SPH-1 hypothetical protein YP_001564125.1 3419327 R 398578 CDS YP_001564126.1 160898544 5748687 complement(3420409..3421722) 1 NC_010002.1 KEGG: xcb:XC_0115 hypothetical protein; hypothetical protein 3421722 5748687 Daci_3103 Delftia acidovorans SPH-1 hypothetical protein YP_001564126.1 3420409 R 398578 CDS YP_001564127.1 160898545 5748688 complement(3422246..3422737) 1 NC_010002.1 PFAM: regulatory protein LuxR; KEGG: bvi:Bcep1808_3676 response regulator receiver protein; LuxR family transcriptional regulator 3422737 5748688 Daci_3104 Delftia acidovorans SPH-1 LuxR family transcriptional regulator YP_001564127.1 3422246 R 398578 CDS YP_001564128.1 160898546 5748689 complement(3423428..3423970) 1 NC_010002.1 PFAM: regulatory protein MarR; KEGG: eca:ECA2036 regulatory protein; MarR family transcriptional regulator 3423970 5748689 Daci_3105 Delftia acidovorans SPH-1 MarR family transcriptional regulator YP_001564128.1 3423428 R 398578 CDS YP_001564129.1 160898547 5748690 3424032..3424931 1 NC_010002.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: eca:ECA2035 regulatory protein; hypothetical protein 3424931 5748690 Daci_3106 Delftia acidovorans SPH-1 hypothetical protein YP_001564129.1 3424032 D 398578 CDS YP_001564130.1 160898548 5748691 3424977..3425612 1 NC_010002.1 PFAM: nitroreductase; KEGG: hch:HCH_03586 nitroreductase; nitroreductase 3425612 5748691 Daci_3107 Delftia acidovorans SPH-1 nitroreductase YP_001564130.1 3424977 D 398578 CDS YP_001564131.1 160898549 5748692 3425688..3426311 1 NC_010002.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: pfl:PFL_3631 RibD C-terminal domain; deaminase-reductase domain-containing protein 3426311 5748692 Daci_3108 Delftia acidovorans SPH-1 deaminase-reductase domain-containing protein YP_001564131.1 3425688 D 398578 CDS YP_001564132.1 160898550 5748693 3426304..3426921 1 NC_010002.1 PFAM: regulatory protein TetR; KEGG: pfl:PFL_3630 hypothetical protein; TetR family transcriptional regulator 3426921 5748693 Daci_3109 Delftia acidovorans SPH-1 TetR family transcriptional regulator YP_001564132.1 3426304 D 398578 CDS YP_001564133.1 160898551 5748694 complement(3427001..3427360) 1 NC_010002.1 hypothetical protein 3427360 5748694 Daci_3110 Delftia acidovorans SPH-1 hypothetical protein YP_001564133.1 3427001 R 398578 CDS YP_001564134.1 160898552 5748695 3427571..3428065 1 NC_010002.1 Inhibits transcription at high concentrations of nickel; nickel responsive regulator 3428065 5748695 Daci_3111 Delftia acidovorans SPH-1 nickel responsive regulator YP_001564134.1 3427571 D 398578 CDS YP_001564135.1 160898553 5748696 3428150..3430213 1 NC_010002.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: azo:azo2217 putative TonB-dependent receptor; TonB-dependent receptor 3430213 5748696 Daci_3112 Delftia acidovorans SPH-1 TonB-dependent receptor YP_001564135.1 3428150 D 398578 CDS YP_001564136.1 160898554 5748697 3430225..3430941 1 NC_010002.1 KEGG: azo:azo2218 putative cobalt transport system, periplasmic-binding protein; putative cobalt transport system, periplasmic-binding protein 3430941 5748697 Daci_3113 Delftia acidovorans SPH-1 putative cobalt transport system, periplasmic-binding protein YP_001564136.1 3430225 D 398578 CDS YP_001564137.1 160898555 5748698 complement(3430995..3432017) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: vei:Veis_1031 uncharacterized protein UPF0065; hypothetical protein 3432017 5748698 Daci_3114 Delftia acidovorans SPH-1 hypothetical protein YP_001564137.1 3430995 R 398578 CDS YP_001564138.1 160898556 5748699 complement(3432014..3433336) 1 NC_010002.1 PFAM: sulfatase; KEGG: bbr:BB1025 probable sulfatase; cerebroside-sulfatase 3433336 5748699 Daci_3115 Delftia acidovorans SPH-1 cerebroside-sulfatase YP_001564138.1 3432014 R 398578 CDS YP_001564139.1 160898557 5748700 3433486..3434382 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bbr:BB1024 LysR-family transcriptional regulator; LysR family transcriptional regulator 3434382 5748700 Daci_3116 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001564139.1 3433486 D 398578 CDS YP_001564140.1 160898558 5748701 complement(3434440..3435738) 1 NC_010002.1 catalyzes the oxidative deamination of D-amino acids; D-amino acid dehydrogenase small subunit 3435738 5748701 Daci_3117 Delftia acidovorans SPH-1 D-amino acid dehydrogenase small subunit YP_001564140.1 3434440 R 398578 CDS YP_001564141.1 160898559 5748702 3435853..3436338 1 NC_010002.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bbr:BB3050 leucine-responsive regulatory protein; AsnC family transcriptional regulator 3436338 5748702 Daci_3118 Delftia acidovorans SPH-1 AsnC family transcriptional regulator YP_001564141.1 3435853 D 398578 CDS YP_001564142.1 160898560 5748703 3436671..3437900 1 NC_010002.1 TIGRFAM: conserved repeat domain protein; PFAM: protein of unknown function DUF11; KEGG: rca:Rcas_0471 conserved repeat domain; hypothetical protein 3437900 5748703 Daci_3119 Delftia acidovorans SPH-1 hypothetical protein YP_001564142.1 3436671 D 398578 CDS YP_001564143.1 160898561 5748704 complement(3437926..3438786) 1 NC_010002.1 PFAM: metallophosphoesterase; KEGG: aav:Aave_3458 metallophosphoesterase; metallophosphoesterase 3438786 5748704 Daci_3120 Delftia acidovorans SPH-1 metallophosphoesterase YP_001564143.1 3437926 R 398578 CDS YP_001564144.1 160898562 5748705 complement(3438773..3439834) 1 NC_010002.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: aav:Aave_3457 ABC transporter-related protein; ABC transporter-like protein 3439834 5748705 Daci_3121 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001564144.1 3438773 R 398578 CDS YP_001564145.1 160898563 5748706 complement(3439824..3440708) 1 NC_010002.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_3456 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3440708 5748706 Daci_3122 Delftia acidovorans SPH-1 binding-protein-dependent transport system inner membrane protein YP_001564145.1 3439824 R 398578 CDS YP_001564146.1 160898564 5748707 complement(3440711..3441568) 1 NC_010002.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_3455 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3441568 5748707 Daci_3123 Delftia acidovorans SPH-1 binding-protein-dependent transport system inner membrane protein YP_001564146.1 3440711 R 398578 CDS YP_001564147.1 160898565 5748708 complement(3441565..3442602) 1 NC_010002.1 PFAM: extracellular solute-binding protein family 1; KEGG: aav:Aave_3454 putative periplasmic solute-binding protein; extracellular solute-binding protein 3442602 5748708 Daci_3124 Delftia acidovorans SPH-1 extracellular solute-binding protein YP_001564147.1 3441565 R 398578 CDS YP_001564148.1 160898566 5748709 complement(3442682..3443596) 1 NC_010002.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: aav:Aave_3453 transcriptional regulator, LacI family; LacI family transcriptional regulator 3443596 5748709 Daci_3125 Delftia acidovorans SPH-1 LacI family transcriptional regulator YP_001564148.1 3442682 R 398578 CDS YP_001564149.1 160898567 5748710 complement(3443759..3444649) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_0212 transcriptional regulator, LysR family; LysR family transcriptional regulator 3444649 5748710 Daci_3126 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001564149.1 3443759 R 398578 CDS YP_001564150.1 160898568 5748711 3444678..3445769 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: bbr:BB2823 hypothetical protein; hypothetical protein 3445769 5748711 Daci_3127 Delftia acidovorans SPH-1 hypothetical protein YP_001564150.1 3444678 D 398578 CDS YP_001564151.1 160898569 5748712 3445788..3446741 1 NC_010002.1 PFAM: intradiol ring-cleavage dioxygenase; KEGG: bja:blr0926 catechol 1,2-dioxygenase; intradiol ring-cleavage dioxygenase 3446741 5748712 Daci_3128 Delftia acidovorans SPH-1 intradiol ring-cleavage dioxygenase YP_001564151.1 3445788 D 398578 CDS YP_001564152.1 160898570 5748713 3446755..3447555 1 NC_010002.1 KEGG: pol:Bpro_0971 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; TIGRFAM: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; PFAM: Hydratase/decarboxylase; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 3447555 5748713 Daci_3129 Delftia acidovorans SPH-1 2-oxo-hepta-3-ene-1,7-dioic acid hydratase YP_001564152.1 3446755 D 398578 CDS YP_001564153.1 160898571 5748714 complement(3447577..3448374) 1 NC_010002.1 PFAM: DNA polymerase beta domain protein region; KEGG: pfl:PFL_2430 hypothetical protein; DNA polymerase subunit beta 3448374 5748714 Daci_3130 Delftia acidovorans SPH-1 DNA polymerase subunit beta YP_001564153.1 3447577 R 398578 CDS YP_001564154.1 160898572 5748715 3448544..3449932 1 NC_010002.1 TIGRFAM: gluconate transporter; PFAM: Gluconate transporter; Citrate transporter; KEGG: ppf:Pput_0685 gluconate transporter; gluconate transporter 3449932 5748715 Daci_3131 Delftia acidovorans SPH-1 gluconate transporter YP_001564154.1 3448544 D 398578 CDS YP_001564155.1 160898573 5748716 3450446..3450709 1 NC_010002.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 3450709 5748716 Daci_3132 Delftia acidovorans SPH-1 translation initiation factor IF-1 YP_001564155.1 3450446 D 398578 CDS YP_001564156.1 160898574 5748717 complement(3450867..3451181) 1 NC_010002.1 TIGRFAM: pentapeptide MXKDX repeat protein; KEGG: pol:Bpro_0540 hypothetical protein; pentapeptide MXKDX repeat-containing protein 3451181 5748717 Daci_3133 Delftia acidovorans SPH-1 pentapeptide MXKDX repeat-containing protein YP_001564156.1 3450867 R 398578 CDS YP_001564157.1 160898575 5748718 complement(3451287..3452078) 1 NC_010002.1 PFAM: oxidoreductase molybdopterin binding; KEGG: dar:Daro_2592 oxidoreductase, molybdopterin binding; molybdopterin-binding oxidoreductase 3452078 5748718 Daci_3134 Delftia acidovorans SPH-1 molybdopterin-binding oxidoreductase YP_001564157.1 3451287 R 398578 CDS YP_001564158.1 160898576 5748719 complement(3452075..3452728) 1 NC_010002.1 KEGG: mms:mma_3541 thiosulfate reductase cytochrome b subunit (membrane anchoring protein); thiosulfate reductase cytochrome subunit B 3452728 5748719 Daci_3135 Delftia acidovorans SPH-1 thiosulfate reductase cytochrome subunit B YP_001564158.1 3452075 R 398578 CDS YP_001564159.1 160898577 5748720 complement(3452798..3453721) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_B2495 transcriptional regulator, LysR-family; LysR family transcriptional regulator 3453721 5748720 Daci_3136 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001564159.1 3452798 R 398578 CDS YP_001564160.1 160898578 5748721 3453836..3454789 1 NC_010002.1 PFAM: pyruvate carboxyltransferase; KEGG: bam:Bamb_6280 pyruvate carboxyltransferase; pyruvate carboxyltransferase 3454789 5748721 Daci_3137 Delftia acidovorans SPH-1 pyruvate carboxyltransferase YP_001564160.1 3453836 D 398578 CDS YP_001564161.1 160898579 5748722 3454786..3455964 1 NC_010002.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: reh:H16_B2493 predicted acyl-CoA transferase/carnitine dehydratase; L-carnitine dehydratase/bile acid-inducible protein F 3455964 5748722 Daci_3138 Delftia acidovorans SPH-1 L-carnitine dehydratase/bile acid-inducible protein F YP_001564161.1 3454786 D 398578 CDS YP_001564162.1 160898580 5748723 3456042..3457025 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: pna:Pnap_1121 uncharacterized protein UPF0065; hypothetical protein 3457025 5748723 Daci_3139 Delftia acidovorans SPH-1 hypothetical protein YP_001564162.1 3456042 D 398578 CDS YP_001564163.1 160898581 5748724 3457228..3457539 1 NC_010002.1 hypothetical protein 3457539 5748724 Daci_3140 Delftia acidovorans SPH-1 hypothetical protein YP_001564163.1 3457228 D 398578 CDS YP_001564164.1 160898582 5748725 3457536..3457946 1 NC_010002.1 KEGG: plu:plu2078 hypothetical protein; hypothetical protein 3457946 5748725 Daci_3141 Delftia acidovorans SPH-1 hypothetical protein YP_001564164.1 3457536 D 398578 CDS YP_001564165.1 160898583 5748726 3458019..3458474 1 NC_010002.1 KEGG: pca:Pcar_0362 hypothetical protein; hypothetical protein 3458474 5748726 Daci_3142 Delftia acidovorans SPH-1 hypothetical protein YP_001564165.1 3458019 D 398578 CDS YP_001564166.1 160898584 5748727 3458558..3459490 1 NC_010002.1 PFAM: intradiol ring-cleavage dioxygenase; KEGG: nar:Saro_1876 intradiol ring-cleavage dioxygenase; intradiol ring-cleavage dioxygenase 3459490 5748727 Daci_3143 Delftia acidovorans SPH-1 intradiol ring-cleavage dioxygenase YP_001564166.1 3458558 D 398578 CDS YP_001564167.1 160898585 5748728 3459503..3461152 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: aav:Aave_1494 integral membrane sensor signal transduction histidine kinase; histidine kinase 3461152 5748728 Daci_3144 Delftia acidovorans SPH-1 histidine kinase YP_001564167.1 3459503 D 398578 CDS YP_001564168.1 160898586 5748729 3461149..3461844 1 NC_010002.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: aav:Aave_1493 two component transcriptional regulator, winged helix family; two component transcriptional regulator 3461844 5748729 Daci_3145 Delftia acidovorans SPH-1 two component transcriptional regulator YP_001564168.1 3461149 D 398578 CDS YP_001564169.1 160898587 5748730 complement(3461872..3463182) 1 NC_010002.1 KEGG: pfl:PFL_3619 monooxygenase, NtaA/SnaA/SoxA family; NtaA/SnaA/SoxA family monooxygenase 3463182 5748730 Daci_3146 Delftia acidovorans SPH-1 NtaA/SnaA/SoxA family monooxygenase YP_001564169.1 3461872 R 398578 CDS YP_001564170.1 160898588 5748731 complement(3463202..3465337) 1 NC_010002.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pau:PA14_10200 putative TonB-dependent receptor protein; TonB-dependent receptor 3465337 5748731 Daci_3147 Delftia acidovorans SPH-1 TonB-dependent receptor YP_001564170.1 3463202 R 398578 CDS YP_001564171.1 160898589 5748732 3465509..3466300 1 NC_010002.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: pau:PA14_10190 putative transcriptional regulator; IclR family transcriptional regulator 3466300 5748732 Daci_3148 Delftia acidovorans SPH-1 IclR family transcriptional regulator YP_001564171.1 3465509 D 398578 CDS YP_001564172.1 160898590 5748733 complement(3466331..3467146) 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pfl:PFL_3622 ferric enterobactin transport protein FepC PA4158; ABC transporter-like protein 3467146 5748733 Daci_3149 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001564172.1 3466331 R 398578 CDS YP_001564173.1 160898591 5748734 3467197..3468285 1 NC_010002.1 with FepCDG is involved in the transport of ferric enterobactin; iron-enterobactin transporter periplasmic-binding protein 3468285 5748734 Daci_3150 Delftia acidovorans SPH-1 iron-enterobactin transporter periplasmic-binding protein YP_001564173.1 3467197 D 398578 CDS YP_001564174.1 160898592 5748735 3468289..3469353 1 NC_010002.1 PFAM: transport system permease protein; KEGG: pfl:PFL_3624 ferric vibriobactin ABC transporter, permease protein VC0777; transport system permease 3469353 5748735 Daci_3151 Delftia acidovorans SPH-1 transport system permease YP_001564174.1 3468289 D 398578 CDS YP_001564175.1 160898593 5748736 3469350..3470390 1 NC_010002.1 PFAM: transport system permease protein; KEGG: pfl:PFL_3625 ferric vibriobactin ABC transporter, permease protein VC0778; transport system permease 3470390 5748736 Daci_3152 Delftia acidovorans SPH-1 transport system permease YP_001564175.1 3469350 D 398578 CDS YP_001564176.1 160898594 5748737 complement(3470438..3470809) 1 NC_010002.1 KEGG: rso:RSc1866 hypothetical protein; hypothetical protein 3470809 5748737 Daci_3153 Delftia acidovorans SPH-1 hypothetical protein YP_001564176.1 3470438 R 398578 CDS YP_001564177.1 160898595 5748738 3470953..3471261 1 NC_010002.1 PFAM: helix-turn-helix domain protein; KEGG: sgl:SG0777 hypothetical protein; XRE family transcriptional regulator 3471261 5748738 Daci_3154 Delftia acidovorans SPH-1 XRE family transcriptional regulator YP_001564177.1 3470953 D 398578 CDS YP_001564178.1 160898596 5748739 complement(3471357..3472349) 1 NC_010002.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: sun:SUN_2434 5-methylcytosine-specific restriction enzyme A; HNH endonuclease 3472349 5748739 Daci_3155 Delftia acidovorans SPH-1 HNH endonuclease YP_001564178.1 3471357 R 398578 CDS YP_001564179.1 160898597 5748740 complement(3472567..3473904) 1 NC_010002.1 KEGG: rme:Rmet_3347 hypothetical protein; hypothetical protein 3473904 5748740 Daci_3156 Delftia acidovorans SPH-1 hypothetical protein YP_001564179.1 3472567 R 398578 CDS YP_001564180.1 160898598 5748741 3474949..3475425 1 NC_010002.1 KEGG: pfl:PFL_2777 Ypar31 protein; Ypar31 protein 3475425 5748741 Daci_3157 Delftia acidovorans SPH-1 Ypar31 protein YP_001564180.1 3474949 D 398578 CDS YP_001564181.1 160898599 5748742 complement(3475506..3475952) 1 NC_010002.1 KEGG: aav:Aave_4020 hypothetical protein; hypothetical protein 3475952 5748742 Daci_3158 Delftia acidovorans SPH-1 hypothetical protein YP_001564181.1 3475506 R 398578 CDS YP_001564182.1 160898600 5748743 3477139..3477357 1 NC_010002.1 hypothetical protein 3477357 5748743 Daci_3159 Delftia acidovorans SPH-1 hypothetical protein YP_001564182.1 3477139 D 398578 CDS YP_001564183.1 160898601 5748744 3477354..3477962 1 NC_010002.1 KEGG: bch:Bcen2424_0934 lysine exporter protein (LysE/YggA); hypothetical protein 3477962 5748744 Daci_3160 Delftia acidovorans SPH-1 hypothetical protein YP_001564183.1 3477354 D 398578 CDS YP_001564184.1 160898602 5748745 complement(3478003..3478938) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_4698 transcriptional regulator, LysR family; LysR family transcriptional regulator 3478938 5748745 Daci_3161 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001564184.1 3478003 R 398578 CDS YP_001564185.1 160898603 5748746 3479020..3480039 1 NC_010002.1 KEGG: mmw:Mmwyl1_0268 hypothetical protein; hypothetical protein 3480039 5748746 Daci_3162 Delftia acidovorans SPH-1 hypothetical protein YP_001564185.1 3479020 D 398578 CDS YP_001564186.1 160898604 5748747 3480130..3481134 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: reu:Reut_A1018 twin-arginine translocation pathway signal; hypothetical protein 3481134 5748747 Daci_3163 Delftia acidovorans SPH-1 hypothetical protein YP_001564186.1 3480130 D 398578 CDS YP_001564187.1 160898605 5748748 3481235..3482224 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rme:Rmet_3216 transcriptional regulator, LysR family; LysR family transcriptional regulator 3482224 5748748 Daci_3164 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001564187.1 3481235 D 398578 CDS YP_001564188.1 160898606 5748749 complement(3482261..3483238) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: reh:H16_A3350 probable extra-cytoplasmic solute receptor; hypothetical protein 3483238 5748749 Daci_3165 Delftia acidovorans SPH-1 hypothetical protein YP_001564188.1 3482261 R 398578 CDS YP_001564189.1 160898607 5748750 complement(3483272..3484777) 1 NC_010002.1 activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 3484777 5748750 Daci_3166 Delftia acidovorans SPH-1 long-chain-fatty-acid--CoA ligase YP_001564189.1 3483272 R 398578 CDS YP_001564190.1 160898608 5748751 complement(3484774..3485679) 1 NC_010002.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: hne:HNE_0595 oxidoreductase, short chain dehydrogenase/reductase family protein; short-chain dehydrogenase/reductase SDR 3485679 5748751 Daci_3167 Delftia acidovorans SPH-1 short-chain dehydrogenase/reductase SDR YP_001564190.1 3484774 R 398578 CDS YP_001564191.1 160898609 5748752 3486026..3487213 1 NC_010002.1 PFAM: Integrase catalytic region; KEGG: ppf:Pput_3520 integrase, catalytic region; integrase catalytic subunit 3487213 5748752 Daci_3168 Delftia acidovorans SPH-1 integrase catalytic subunit YP_001564191.1 3486026 D 398578 CDS YP_001564192.1 160898610 5748753 complement(3487464..3488948) 1 NC_010002.1 PFAM: cytochrome c class I; KEGG: spe:Spro_4016 gluconate 2-dehydrogenase (acceptor); gluconate 2-dehydrogenase 3488948 5748753 Daci_3169 Delftia acidovorans SPH-1 gluconate 2-dehydrogenase YP_001564192.1 3487464 R 398578 CDS YP_001564193.1 160898611 5748754 complement(3488954..3489541) 1 NC_010002.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bur:Bcep18194_B1542 (2Fe-2S)-binding protein; 2Fe-2S iron-sulfur cluster-binding domain-containing protein 3489541 5748754 Daci_3170 Delftia acidovorans SPH-1 2Fe-2S iron-sulfur cluster-binding domain-containing protein YP_001564193.1 3488954 R 398578 CDS YP_001564194.1 160898612 5748755 complement(3489538..3492459) 1 NC_010002.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bam:Bamb_3853 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit 3492459 5748755 Daci_3171 Delftia acidovorans SPH-1 aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit YP_001564194.1 3489538 R 398578 CDS YP_001564195.1 160898613 5748756 3492893..3493939 1 NC_010002.1 part of the metNIQ transport system for methionine; DL-methionine transporter ATP-binding subunit 3493939 metN 5748756 metN Delftia acidovorans SPH-1 DL-methionine transporter ATP-binding subunit YP_001564195.1 3492893 D 398578 CDS YP_001564196.1 160898614 5748757 3493943..3494608 1 NC_010002.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_2344 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3494608 5748757 Daci_3173 Delftia acidovorans SPH-1 binding-protein-dependent transport system inner membrane protein YP_001564196.1 3493943 D 398578 CDS YP_001564197.1 160898615 5748758 3494688..3495497 1 NC_010002.1 TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: ajs:Ajs_2342 lipoprotein, YaeC family; YaeC family lipoprotein 3495497 5748758 Daci_3174 Delftia acidovorans SPH-1 YaeC family lipoprotein YP_001564197.1 3494688 D 398578 CDS YP_001564198.1 160898616 5748759 3495502..3496032 1 NC_010002.1 PFAM: Acireductone dioxygenase ARD; Cupin 2 conserved barrel domain protein; KEGG: ter:Tery_2668 acireductone dioxygenase, ARD; acireductone dioxygenase ARD 3496032 5748759 Daci_3175 Delftia acidovorans SPH-1 acireductone dioxygenase ARD YP_001564198.1 3495502 D 398578 CDS YP_001564199.1 160898617 5748760 3496029..3497129 1 NC_010002.1 KEGG: ajs:Ajs_2343 hypothetical protein; hypothetical protein 3497129 5748760 Daci_3176 Delftia acidovorans SPH-1 hypothetical protein YP_001564199.1 3496029 D 398578 CDS YP_001564200.1 160898618 5748761 complement(3497189..3498232) 1 NC_010002.1 PFAM: Bile acid:sodium symporter; KEGG: ajs:Ajs_3402 hypothetical protein; bile acid:sodium symporter 3498232 5748761 Daci_3177 Delftia acidovorans SPH-1 bile acid:sodium symporter YP_001564200.1 3497189 R 398578 CDS YP_001564201.1 160898619 5748762 3498351..3499268 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bvi:Bcep1808_1461 transcriptional regulator, LysR family; LysR family transcriptional regulator 3499268 5748762 Daci_3178 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001564201.1 3498351 D 398578 CDS YP_001564202.1 160898620 5748763 complement(3499243..3500616) 1 NC_010002.1 KEGG: ecp:ECP_3222 putative tagatose 6-phosphate kinase AgaZ; TIGRFAM: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit; PFAM: D-tagatose-bisphosphate aldolase class II accessory protein AgaZ; D-tagatose-bisphosphate aldolase non-catalytic subunit 3500616 5748763 Daci_3179 Delftia acidovorans SPH-1 D-tagatose-bisphosphate aldolase non-catalytic subunit YP_001564202.1 3499243 R 398578 CDS YP_001564203.1 160898621 5748764 complement(3500621..3501589) 1 NC_010002.1 PFAM: PfkB domain protein; KEGG: vei:Veis_3416 PfkB domain protein; ribokinase-like domain-containing protein 3501589 5748764 Daci_3180 Delftia acidovorans SPH-1 ribokinase-like domain-containing protein YP_001564203.1 3500621 R 398578 CDS YP_001564204.1 160898622 5748765 complement(3501650..3502696) 1 NC_010002.1 PFAM: inner-membrane translocator; KEGG: vei:Veis_3417 inner-membrane translocator; monosaccharide-transporting ATPase 3502696 5748765 Daci_3181 Delftia acidovorans SPH-1 monosaccharide-transporting ATPase YP_001564204.1 3501650 R 398578 CDS YP_001564205.1 160898623 5748766 complement(3502693..3504249) 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_3418 ABC transporter related; ABC transporter-like protein 3504249 5748766 Daci_3182 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001564205.1 3502693 R 398578 CDS YP_001564206.1 160898624 5748767 complement(3504276..3505202) 1 NC_010002.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: vei:Veis_3419 periplasmic binding protein/LacI transcriptional regulator; periplasmic-binding protein/LacI transcriptional regulator 3505202 5748767 Daci_3183 Delftia acidovorans SPH-1 periplasmic-binding protein/LacI transcriptional regulator YP_001564206.1 3504276 R 398578 CDS YP_001564207.1 160898625 5748768 complement(3505237..3506046) 1 NC_010002.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: vei:Veis_3420 regulatory protein, DeoR; DeoR family transcriptional regulator 3506046 5748768 Daci_3184 Delftia acidovorans SPH-1 DeoR family transcriptional regulator YP_001564207.1 3505237 R 398578 CDS YP_001564208.1 160898626 5748769 complement(3506157..3506888) 1 NC_010002.1 PFAM: glutamine amidotransferase class-I; KEGG: net:Neut_1032 glutamine amidotransferase class-I; class I glutamine amidotransferase 3506888 5748769 Daci_3185 Delftia acidovorans SPH-1 class I glutamine amidotransferase YP_001564208.1 3506157 R 398578 CDS YP_001564209.1 160898627 5748770 complement(3507072..3509132) 1 NC_010002.1 KEGG: par:Psyc_1601 hypothetical protein; hypothetical protein 3509132 5748770 Daci_3186 Delftia acidovorans SPH-1 hypothetical protein YP_001564209.1 3507072 R 398578 CDS YP_001564210.1 160898628 5748771 complement(3509506..3510408) 1 NC_010002.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: spe:Spro_1817 protein of unknown function DUF6 transmembrane; hypothetical protein 3510408 5748771 Daci_3187 Delftia acidovorans SPH-1 hypothetical protein YP_001564210.1 3509506 R 398578 CDS YP_001564211.1 160898629 5748772 3510423..3510992 1 NC_010002.1 PFAM: helix-turn-helix domain protein; KEGG: pau:PA14_46710 putative transcriptional regulator; XRE family transcriptional regulator 3510992 5748772 Daci_3188 Delftia acidovorans SPH-1 XRE family transcriptional regulator YP_001564211.1 3510423 D 398578 CDS YP_001564212.1 160898630 5748773 complement(3511228..3512388) 1 NC_010002.1 KEGG: hch:HCH_06058 hypothetical protein; hypothetical protein 3512388 5748773 Daci_3189 Delftia acidovorans SPH-1 hypothetical protein YP_001564212.1 3511228 R 398578 CDS YP_001564213.1 160898631 5748774 complement(3512381..3513016) 1 NC_010002.1 PFAM: Aspartyl/Asparaginyl beta-hydroxylase; KEGG: hch:HCH_06063 hypothetical protein; aspartyl/asparaginyl beta-hydroxylase 3513016 5748774 Daci_3190 Delftia acidovorans SPH-1 aspartyl/asparaginyl beta-hydroxylase YP_001564213.1 3512381 R 398578 CDS YP_001564214.1 160898632 5748775 complement(3513013..3513699) 1 NC_010002.1 PFAM: adenylylsulfate kinase; KEGG: aav:Aave_4709 adenylyl-sulfate kinase; adenylylsulfate kinase 3513699 5748775 Daci_3191 Delftia acidovorans SPH-1 adenylylsulfate kinase YP_001564214.1 3513013 R 398578 CDS YP_001564215.1 160898633 5748776 3514419..3515660 1 NC_010002.1 PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_0424 major facilitator superfamily MFS_1; major facilitator transporter 3515660 5748776 Daci_3192 Delftia acidovorans SPH-1 major facilitator transporter YP_001564215.1 3514419 D 398578 CDS YP_001564216.1 160898634 5748777 3515861..3516958 1 NC_010002.1 PFAM: integrase family protein; KEGG: rso:RSc1655 probable integrase/recombinase protein; integrase family protein 3516958 5748777 Daci_3193 Delftia acidovorans SPH-1 integrase family protein YP_001564216.1 3515861 D 398578 CDS YP_001564217.1 160898635 5748778 complement(3517136..3517528) 1 NC_010002.1 hypothetical protein 3517528 5748778 Daci_3194 Delftia acidovorans SPH-1 hypothetical protein YP_001564217.1 3517136 R 398578 CDS YP_001564218.1 160898636 5748779 complement(3517573..3518010) 1 NC_010002.1 hypothetical protein 3518010 5748779 Daci_3195 Delftia acidovorans SPH-1 hypothetical protein YP_001564218.1 3517573 R 398578 CDS YP_001564219.1 160898637 5748780 complement(3518092..3518331) 1 NC_010002.1 hypothetical protein 3518331 5748780 Daci_3196 Delftia acidovorans SPH-1 hypothetical protein YP_001564219.1 3518092 R 398578 CDS YP_001564220.1 160898638 5748781 complement(3518752..3519141) 1 NC_010002.1 hypothetical protein 3519141 5748781 Daci_3197 Delftia acidovorans SPH-1 hypothetical protein YP_001564220.1 3518752 R 398578 CDS YP_001564221.1 160898639 5748782 complement(3519138..3519587) 1 NC_010002.1 KEGG: pna:Pnap_4291 hypothetical protein; hypothetical protein 3519587 5748782 Daci_3198 Delftia acidovorans SPH-1 hypothetical protein YP_001564221.1 3519138 R 398578 CDS YP_001564222.1 160898640 5748783 complement(3519668..3520021) 1 NC_010002.1 hypothetical protein 3520021 5748783 Daci_3199 Delftia acidovorans SPH-1 hypothetical protein YP_001564222.1 3519668 R 398578 CDS YP_001564223.1 160898641 5748784 complement(3520023..3520547) 1 NC_010002.1 SMART: Pathogenesis-related transcriptional factor and ERF protein; KEGG: nha:Nham_2362 hypothetical protein; pathogenesis-like transcriptional factor and ERF protein 3520547 5748784 Daci_3200 Delftia acidovorans SPH-1 pathogenesis-like transcriptional factor and ERF protein YP_001564223.1 3520023 R 398578 CDS YP_001564224.1 160898642 5748785 complement(3520743..3521243) 1 NC_010002.1 PFAM: Pathogenesis-related transcriptional factor and ERF protein; KEGG: bvi:Bcep1808_4541 pathogenesis-related transcriptional factor and ERF protein; pathogenesis-like transcriptional factor and ERF protein 3521243 5748785 Daci_3201 Delftia acidovorans SPH-1 pathogenesis-like transcriptional factor and ERF protein YP_001564224.1 3520743 R 398578 CDS YP_001564225.1 160898643 5748786 complement(3521240..3522400) 1 NC_010002.1 KEGG: aav:Aave_4134 hypothetical protein; hypothetical protein 3522400 5748786 Daci_3202 Delftia acidovorans SPH-1 hypothetical protein YP_001564225.1 3521240 R 398578 CDS YP_001564226.1 160898644 5748787 complement(3522747..3523139) 1 NC_010002.1 hypothetical protein 3523139 5748787 Daci_3203 Delftia acidovorans SPH-1 hypothetical protein YP_001564226.1 3522747 R 398578 CDS YP_001564227.1 160898645 5748788 complement(3523106..3523885) 1 NC_010002.1 KEGG: hiq:CGSHiGG_04990 hypothetical protein; hypothetical protein 3523885 5748788 Daci_3204 Delftia acidovorans SPH-1 hypothetical protein YP_001564227.1 3523106 R 398578 CDS YP_001564228.1 160898646 5748789 complement(3523888..3524637) 1 NC_010002.1 PFAM: ERF family protein; KEGG: rsq:Rsph17025_1819 ERF family protein; ERF family protein 3524637 5748789 Daci_3205 Delftia acidovorans SPH-1 ERF family protein YP_001564228.1 3523888 R 398578 CDS YP_001564229.1 160898647 5748790 complement(3525090..3525284) 1 NC_010002.1 hypothetical protein 3525284 5748790 Daci_3206 Delftia acidovorans SPH-1 hypothetical protein YP_001564229.1 3525090 R 398578 CDS YP_001564230.1 160898648 5748791 complement(3525281..3525688) 1 NC_010002.1 hypothetical protein 3525688 5748791 Daci_3207 Delftia acidovorans SPH-1 hypothetical protein YP_001564230.1 3525281 R 398578 CDS YP_001564231.1 160898649 5748792 complement(3525690..3526067) 1 NC_010002.1 hypothetical protein 3526067 5748792 Daci_3208 Delftia acidovorans SPH-1 hypothetical protein YP_001564231.1 3525690 R 398578 CDS YP_001564232.1 160898650 5748793 complement(3526386..3526730) 1 NC_010002.1 hypothetical protein 3526730 5748793 Daci_3209 Delftia acidovorans SPH-1 hypothetical protein YP_001564232.1 3526386 R 398578 CDS YP_001564233.1 160898651 5748794 complement(3526723..3527016) 1 NC_010002.1 hypothetical protein 3527016 5748794 Daci_3210 Delftia acidovorans SPH-1 hypothetical protein YP_001564233.1 3526723 R 398578 CDS YP_001564234.1 160898652 5748795 complement(3527013..3527411) 1 NC_010002.1 hypothetical protein 3527411 5748795 Daci_3211 Delftia acidovorans SPH-1 hypothetical protein YP_001564234.1 3527013 R 398578 CDS YP_001564235.1 160898653 5748796 complement(3527638..3527859) 1 NC_010002.1 hypothetical protein 3527859 5748796 Daci_3212 Delftia acidovorans SPH-1 hypothetical protein YP_001564235.1 3527638 R 398578 CDS YP_001564236.1 160898654 5748797 complement(3527903..3528298) 1 NC_010002.1 hypothetical protein 3528298 5748797 Daci_3213 Delftia acidovorans SPH-1 hypothetical protein YP_001564236.1 3527903 R 398578 CDS YP_001564237.1 160898655 5748798 complement(3528381..3528722) 1 NC_010002.1 hypothetical protein 3528722 5748798 Daci_3214 Delftia acidovorans SPH-1 hypothetical protein YP_001564237.1 3528381 R 398578 CDS YP_001564238.1 160898656 5748799 complement(3530748..3531176) 1 NC_010002.1 hypothetical protein 3531176 5748799 Daci_3215 Delftia acidovorans SPH-1 hypothetical protein YP_001564238.1 3530748 R 398578 CDS YP_001564239.1 160898657 5748800 complement(3531197..3531784) 1 NC_010002.1 hypothetical protein 3531784 5748800 Daci_3216 Delftia acidovorans SPH-1 hypothetical protein YP_001564239.1 3531197 R 398578 CDS YP_001564240.1 160898658 5748801 complement(3531817..3532527) 1 NC_010002.1 PFAM: peptidase S24 and S26 domain protein; KEGG: par:Psyc_0472 possible transcriptional regulator, Cro/CI family; putative phage repressor 3532527 5748801 Daci_3217 Delftia acidovorans SPH-1 putative phage repressor YP_001564240.1 3531817 R 398578 CDS YP_001564241.1 160898659 5748802 3534109..3534660 1 NC_010002.1 KEGG: sat:SYN_01843 hypothetical cytosolic protein; hypothetical protein 3534660 5748802 Daci_3218 Delftia acidovorans SPH-1 hypothetical protein YP_001564241.1 3534109 D 398578 CDS YP_001564242.1 160898660 5748803 3534653..3535453 1 NC_010002.1 KEGG: mms:mma_2209 hypothetical protein; hypothetical protein 3535453 5748803 Daci_3219 Delftia acidovorans SPH-1 hypothetical protein YP_001564242.1 3534653 D 398578 CDS YP_001564243.1 160898661 5748804 3535450..3536820 1 NC_010002.1 PFAM: DnaB domain protein helicase domain protein; KEGG: ajs:Ajs_3212 replicative DNA helicase; DnaB domain-containing protein 3536820 5748804 Daci_3220 Delftia acidovorans SPH-1 DnaB domain-containing protein YP_001564243.1 3535450 D 398578 CDS YP_001564244.1 160898662 5748805 3536823..3537536 1 NC_010002.1 KEGG: aav:Aave_1690 uncharacterized phage-encoded protein; hypothetical protein 3537536 5748805 Daci_3221 Delftia acidovorans SPH-1 hypothetical protein YP_001564244.1 3536823 D 398578 CDS YP_001564245.1 160898663 5748806 3537533..3538018 1 NC_010002.1 KEGG: bbr:BB1686 hypothetical protein; hypothetical protein 3538018 5748806 Daci_3222 Delftia acidovorans SPH-1 hypothetical protein YP_001564245.1 3537533 D 398578 CDS YP_001564246.1 160898664 5748807 3538317..3538619 1 NC_010002.1 hypothetical protein 3538619 5748807 Daci_3223 Delftia acidovorans SPH-1 hypothetical protein YP_001564246.1 3538317 D 398578 CDS YP_001564247.1 160898665 5748808 3538616..3539086 1 NC_010002.1 hypothetical protein 3539086 5748808 Daci_3224 Delftia acidovorans SPH-1 hypothetical protein YP_001564247.1 3538616 D 398578 CDS YP_001564248.1 160898666 5748809 3539430..3539735 1 NC_010002.1 hypothetical protein 3539735 5748809 Daci_3225 Delftia acidovorans SPH-1 hypothetical protein YP_001564248.1 3539430 D 398578 CDS YP_001564249.1 160898667 5748810 3539728..3540126 1 NC_010002.1 KEGG: aha:AHA_2039 NinB protein; hypothetical protein 3540126 5748810 Daci_3226 Delftia acidovorans SPH-1 hypothetical protein YP_001564249.1 3539728 D 398578 CDS YP_001564250.1 160898668 5748811 3540123..3540641 1 NC_010002.1 KEGG: mms:mma_2189 hypothetical protein; hypothetical protein 3540641 5748811 Daci_3227 Delftia acidovorans SPH-1 hypothetical protein YP_001564250.1 3540123 D 398578 CDS YP_001564251.1 160898669 5748812 3540641..3541138 1 NC_010002.1 KEGG: reu:Reut_B4055 hypothetical protein; hypothetical protein 3541138 5748812 Daci_3228 Delftia acidovorans SPH-1 hypothetical protein YP_001564251.1 3540641 D 398578 CDS YP_001564252.1 160898670 5748813 3541138..3541734 1 NC_010002.1 PFAM: Lambda NinG family protein; KEGG: hit:NTHI1505 hypothetical protein; lambda NinG family protein 3541734 5748813 Daci_3229 Delftia acidovorans SPH-1 lambda NinG family protein YP_001564252.1 3541138 D 398578 CDS YP_001564253.1 160898671 5748814 3541731..3542174 1 NC_010002.1 hypothetical protein 3542174 5748814 Daci_3230 Delftia acidovorans SPH-1 hypothetical protein YP_001564253.1 3541731 D 398578 CDS YP_001564254.1 160898672 5748815 3542928..3543269 1 NC_010002.1 hypothetical protein 3543269 5748815 Daci_3231 Delftia acidovorans SPH-1 hypothetical protein YP_001564254.1 3542928 D 398578 CDS YP_001564255.1 160898673 5748816 3543480..3543722 1 NC_010002.1 hypothetical protein 3543722 5748816 Daci_3232 Delftia acidovorans SPH-1 hypothetical protein YP_001564255.1 3543480 D 398578 CDS YP_001564256.1 160898674 5748817 complement(3543738..3544115) 1 NC_010002.1 KEGG: har:HEAR3047 hypothetical protein; hypothetical protein 3544115 5748817 Daci_3233 Delftia acidovorans SPH-1 hypothetical protein YP_001564256.1 3543738 R 398578 CDS YP_001564257.1 160898675 5748818 3544141..3544773 1 NC_010002.1 KEGG: ypk:y2213 hypothetical protein; hypothetical protein 3544773 5748818 Daci_3234 Delftia acidovorans SPH-1 hypothetical protein YP_001564257.1 3544141 D 398578 CDS YP_001564258.1 160898676 5748819 3544804..3545268 1 NC_010002.1 KEGG: cko:CKO_01870 hypothetical protein; hypothetical protein 3545268 5748819 Daci_3235 Delftia acidovorans SPH-1 hypothetical protein YP_001564258.1 3544804 D 398578 CDS YP_001564259.1 160898677 5748820 3545255..3546541 1 NC_010002.1 PFAM: protein of unknown function DUF264; KEGG: bbr:BB3506 putative phage terminase; hypothetical protein 3546541 5748820 Daci_3236 Delftia acidovorans SPH-1 hypothetical protein YP_001564259.1 3545255 D 398578 CDS YP_001564260.1 160898678 5748821 3546561..3547958 1 NC_010002.1 KEGG: cko:CKO_01868 hypothetical protein; hypothetical protein 3547958 5748821 Daci_3237 Delftia acidovorans SPH-1 hypothetical protein YP_001564260.1 3546561 D 398578 CDS YP_001564261.1 160898679 5748822 3547958..3549067 1 NC_010002.1 KEGG: ecv:APECO1_523 hypothetical protein; hypothetical protein 3549067 5748822 Daci_3238 Delftia acidovorans SPH-1 hypothetical protein YP_001564261.1 3547958 D 398578 CDS YP_001564262.1 160898680 5748823 3549077..3549397 1 NC_010002.1 hypothetical protein 3549397 5748823 Daci_3239 Delftia acidovorans SPH-1 hypothetical protein YP_001564262.1 3549077 D 398578 CDS YP_001564263.1 160898681 5748824 3549549..3550283 1 NC_010002.1 KEGG: pap:PSPA7_2407 hypothetical protein; hypothetical protein 3550283 5748824 Daci_3240 Delftia acidovorans SPH-1 hypothetical protein YP_001564263.1 3549549 D 398578 CDS YP_001564264.1 160898682 5748825 3550302..3551270 1 NC_010002.1 KEGG: bbr:BB3501 hypothetical protein; hypothetical protein 3551270 5748825 Daci_3241 Delftia acidovorans SPH-1 hypothetical protein YP_001564264.1 3550302 D 398578 CDS YP_001564265.1 160898683 5748826 3551270..3551569 1 NC_010002.1 KEGG: sit:TM1040_0806 hypothetical protein; hypothetical protein 3551569 5748826 Daci_3242 Delftia acidovorans SPH-1 hypothetical protein YP_001564265.1 3551270 D 398578 CDS YP_001564266.1 160898684 5748827 3551572..3551988 1 NC_010002.1 KEGG: bbr:BB3499 hypothetical protein; hypothetical protein 3551988 5748827 Daci_3243 Delftia acidovorans SPH-1 hypothetical protein YP_001564266.1 3551572 D 398578 CDS YP_001564267.1 160898685 5748828 3552336..3552701 1 NC_010002.1 KEGG: bbr:BB3497 hypothetical protein; hypothetical protein 3552701 5748828 Daci_3244 Delftia acidovorans SPH-1 hypothetical protein YP_001564267.1 3552336 D 398578 CDS YP_001564268.1 160898686 5748829 3552701..3553270 1 NC_010002.1 KEGG: yen:YE2318 hypothetical protein; hypothetical protein 3553270 5748829 Daci_3245 Delftia acidovorans SPH-1 hypothetical protein YP_001564268.1 3552701 D 398578 CDS YP_001564269.1 160898687 5748830 3553267..3553671 1 NC_010002.1 KEGG: smd:Smed_1885 hypothetical protein; hypothetical protein 3553671 5748830 Daci_3246 Delftia acidovorans SPH-1 hypothetical protein YP_001564269.1 3553267 D 398578 CDS YP_001564270.1 160898688 5748831 3553737..3554423 1 NC_010002.1 PFAM: tail protein 3; KEGG: pap:PSPA7_2414 phage tail protein; tail protein 3 3554423 5748831 Daci_3247 Delftia acidovorans SPH-1 tail protein 3 YP_001564270.1 3553737 D 398578 CDS YP_001564271.1 160898689 5748832 3554521..3554967 1 NC_010002.1 KEGG: aav:Aave_1780 hypothetical protein; hypothetical protein 3554967 5748832 Daci_3248 Delftia acidovorans SPH-1 hypothetical protein YP_001564271.1 3554521 D 398578 CDS YP_001564272.1 160898690 5748833 3554964..3555281 1 NC_010002.1 PFAM: Protein of unknown function DUF1799 phage-related; KEGG: aav:Aave_1781 hypothetical protein; hypothetical protein 3555281 5748833 Daci_3249 Delftia acidovorans SPH-1 hypothetical protein YP_001564272.1 3554964 D 398578 CDS YP_001564273.1 160898691 5748834 3555320..3555712 1 NC_010002.1 hypothetical protein 3555712 5748834 Daci_3250 Delftia acidovorans SPH-1 hypothetical protein YP_001564273.1 3555320 D 398578 CDS YP_001564274.1 160898692 5748835 complement(3555669..3556028) 1 NC_010002.1 KEGG: bcl:ABC1352 hypothetical protein; hypothetical protein 3556028 5748835 Daci_3251 Delftia acidovorans SPH-1 hypothetical protein YP_001564274.1 3555669 R 398578 CDS YP_001564275.1 160898693 5748836 complement(3556248..3556463) 1 NC_010002.1 PFAM: Arc domain protein DNA binding domain protein; Arc domain-containing protein 3556463 5748836 Daci_3252 Delftia acidovorans SPH-1 Arc domain-containing protein YP_001564275.1 3556248 R 398578 CDS YP_001564276.1 160898694 5748837 3556710..3557489 1 NC_010002.1 PFAM: KilA domain protein; KEGG: xfa:XF2294 hypothetical protein; KilA domain-containing protein 3557489 5748837 Daci_3253 Delftia acidovorans SPH-1 KilA domain-containing protein YP_001564276.1 3556710 D 398578 CDS YP_001564277.1 160898695 5748838 3557486..3558298 1 NC_010002.1 PFAM: BRO domain protein; KEGG: cgt:cgR_1918 hypothetical protein; prophage antirepressor 3558298 5748838 Daci_3254 Delftia acidovorans SPH-1 prophage antirepressor YP_001564277.1 3557486 D 398578 CDS YP_001564278.1 160898696 5748839 3558836..3563503 1 NC_010002.1 PFAM: Prophage tail length tape measure; KEGG: aav:Aave_1782 prophage tail length tape measure; prophage tail length tape measure 3563503 5748839 Daci_3255 Delftia acidovorans SPH-1 prophage tail length tape measure YP_001564278.1 3558836 D 398578 CDS YP_001564279.1 160898697 5748840 3563500..3564417 1 NC_010002.1 KEGG: aav:Aave_1783 carbohydrate-binding family V/XII; carbohydrate-binding family V/XII protein 3564417 5748840 Daci_3256 Delftia acidovorans SPH-1 carbohydrate-binding family V/XII protein YP_001564279.1 3563500 D 398578 CDS YP_001564280.1 160898698 5748841 3564414..3565430 1 NC_010002.1 KEGG: aav:Aave_1784 hypothetical protein; hypothetical protein 3565430 5748841 Daci_3257 Delftia acidovorans SPH-1 hypothetical protein YP_001564280.1 3564414 D 398578 CDS YP_001564281.1 160898699 5748842 3565979..3566212 1 NC_010002.1 KEGG: spu:761802 hypothetical protein LOC761802; hypothetical protein 3566212 5748842 Daci_3258 Delftia acidovorans SPH-1 hypothetical protein YP_001564281.1 3565979 D 398578 CDS YP_001564282.1 160898700 5748843 3566216..3566590 1 NC_010002.1 hypothetical protein 3566590 5748843 Daci_3259 Delftia acidovorans SPH-1 hypothetical protein YP_001564282.1 3566216 D 398578 CDS YP_001564283.1 160898701 5748844 3566654..3567061 1 NC_010002.1 KEGG: mmw:Mmwyl1_0576 hypothetical protein; hypothetical protein 3567061 5748844 Daci_3260 Delftia acidovorans SPH-1 hypothetical protein YP_001564283.1 3566654 D 398578 CDS YP_001564284.1 160898702 5748845 3567058..3567582 1 NC_010002.1 KEGG: bbr:BB1714 phage-related hypothetical protein; hypothetical protein 3567582 5748845 Daci_3261 Delftia acidovorans SPH-1 hypothetical protein YP_001564284.1 3567058 D 398578 CDS YP_001564285.1 160898703 5748846 3567579..3568088 1 NC_010002.1 KEGG: aav:Aave_2360 hypothetical protein; hypothetical protein 3568088 5748846 Daci_3262 Delftia acidovorans SPH-1 hypothetical protein YP_001564285.1 3567579 D 398578 CDS YP_001564286.1 160898704 5748848 complement(3568403..3569410) 1 NC_010002.1 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 3569410 5748848 Daci_3263 Delftia acidovorans SPH-1 fructose-1,6-bisphosphatase YP_001564286.1 3568403 R 398578 CDS YP_001564287.1 160898705 5748849 complement(3569461..3572187) 1 NC_010002.1 TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: aav:Aave_1844 aminopeptidase N; aminopeptidase N 3572187 pepN 5748849 pepN Delftia acidovorans SPH-1 aminopeptidase N YP_001564287.1 3569461 R 398578 CDS YP_001564288.1 160898706 5748850 complement(3572265..3573425) 1 NC_010002.1 TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: ajs:Ajs_2758 peptide chain release factor 2; peptide chain release factor 2 3573425 5748850 Daci_3265 Delftia acidovorans SPH-1 peptide chain release factor 2 YP_001564288.1 3572265 R 398578 CDS YP_001564289.1 160898707 5748851 complement(3573685..3575637) 1 NC_010002.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: aav:Aave_0227 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3575637 5748851 Daci_3266 Delftia acidovorans SPH-1 methyl-accepting chemotaxis sensory transducer YP_001564289.1 3573685 R 398578 CDS YP_001564290.1 160898708 5748852 complement(3575792..3578635) 1 NC_010002.1 KEGG: yen:YE2278 putative phosphodiesterase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase 3578635 5748852 Daci_3267 Delftia acidovorans SPH-1 PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase YP_001564290.1 3575792 R 398578 CDS YP_001564291.1 160898709 5748853 3578685..3579176 1 NC_010002.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mms:mma_3497 RNA polymerase sigma-70 factor, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 3579176 5748853 Daci_3268 Delftia acidovorans SPH-1 ECF subfamily RNA polymerase sigma-24 factor YP_001564291.1 3578685 D 398578 CDS YP_001564292.1 160898710 5748854 3579173..3580183 1 NC_010002.1 PFAM: FecR protein; KEGG: neu:NE1098 putative transmembrane sensor; anti-FecI sigma factor FecR 3580183 5748854 Daci_3269 Delftia acidovorans SPH-1 anti-FecI sigma factor FecR YP_001564292.1 3579173 D 398578 CDS YP_001564293.1 160898711 5748855 3580279..3582774 1 NC_010002.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: pen:PSEEN3225 TonB-dependent siderophore receptor FpvA; TonB-dependent siderophore receptor 3582774 5748855 Daci_3270 Delftia acidovorans SPH-1 TonB-dependent siderophore receptor YP_001564293.1 3580279 D 398578 CDS YP_001564294.1 160898712 5748856 3582894..3583400 1 NC_010002.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: mms:mma_3485 RNA polymerase sigma-70 factor, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 3583400 5748856 Daci_3271 Delftia acidovorans SPH-1 ECF subfamily RNA polymerase sigma-24 factor YP_001564294.1 3582894 D 398578 CDS YP_001564295.1 160898713 5748857 3583400..3584383 1 NC_010002.1 PFAM: FecR protein; KEGG: mms:mma_3484 Fe2+-dicitrate sensor, membrane component; anti-FecI sigma factor FecR 3584383 5748857 Daci_3272 Delftia acidovorans SPH-1 anti-FecI sigma factor FecR YP_001564295.1 3583400 D 398578 CDS YP_001564296.1 160898714 5748858 3584473..3586953 1 NC_010002.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: xcb:XC_0558 ferric pseudobactin M114 receptor protein; TonB-dependent siderophore receptor 3586953 5748858 Daci_3273 Delftia acidovorans SPH-1 TonB-dependent siderophore receptor YP_001564296.1 3584473 D 398578 CDS YP_001564297.1 160898715 5748859 3587059..3587562 1 NC_010002.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: psb:Psyr_1040 RNA polymerase sigma factor, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 3587562 5748859 Daci_3274 Delftia acidovorans SPH-1 ECF subfamily RNA polymerase sigma-24 factor YP_001564297.1 3587059 D 398578 CDS YP_001564298.1 160898716 5748860 3587568..3588551 1 NC_010002.1 PFAM: FecR protein; KEGG: mms:mma_3492 Fe2+-dicitrate sensor, membrane component; anti-FecI sigma factor FecR 3588551 5748860 Daci_3275 Delftia acidovorans SPH-1 anti-FecI sigma factor FecR YP_001564298.1 3587568 D 398578 CDS YP_001564299.1 160898717 5748861 3588693..3591215 1 NC_010002.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: azo:azo2994 probable TonB-dependent receptor; TonB-dependent siderophore receptor 3591215 5748861 Daci_3276 Delftia acidovorans SPH-1 TonB-dependent siderophore receptor YP_001564299.1 3588693 D 398578 CDS YP_001564300.1 160898718 5748862 complement(3591342..3591599) 1 NC_010002.1 hypothetical protein 3591599 5748862 Daci_3277 Delftia acidovorans SPH-1 hypothetical protein YP_001564300.1 3591342 R 398578 CDS YP_001564301.1 160898719 5748863 complement(3591603..3591974) 1 NC_010002.1 KEGG: rso:RSc1866 hypothetical protein; hypothetical protein 3591974 5748863 Daci_3278 Delftia acidovorans SPH-1 hypothetical protein YP_001564301.1 3591603 R 398578 CDS YP_001564302.1 160898720 5748864 3592689..3593024 1 NC_010002.1 KEGG: rsh:Rsph17029_3599 hypothetical protein; hypothetical protein 3593024 5748864 Daci_3279 Delftia acidovorans SPH-1 hypothetical protein YP_001564302.1 3592689 D 398578 CDS YP_001564303.1 160898721 5748865 3593026..3594741 1 NC_010002.1 PFAM: PepSY-associated TM helix domain protein; KEGG: neu:NE1084 hypothetical protein; PepSY-associated TM helix domain-containing protein 3594741 5748865 Daci_3280 Delftia acidovorans SPH-1 PepSY-associated TM helix domain-containing protein YP_001564303.1 3593026 D 398578 CDS YP_001564304.1 160898722 5748866 3594738..3595115 1 NC_010002.1 KEGG: neu:NE1083 hypothetical protein; hypothetical protein 3595115 5748866 Daci_3281 Delftia acidovorans SPH-1 hypothetical protein YP_001564304.1 3594738 D 398578 CDS YP_001564305.1 160898723 5748867 3595165..3596397 1 NC_010002.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: neu:NE1082 conserved hypothetical protein; RND family efflux transporter MFP subunit 3596397 5748867 Daci_3282 Delftia acidovorans SPH-1 RND family efflux transporter MFP subunit YP_001564305.1 3595165 D 398578 CDS YP_001564306.1 160898724 5748868 3596391..3598391 1 NC_010002.1 PFAM: ABC transporter related; protein of unknown function DUF214; SMART: AAA ATPase; KEGG: neu:NE1081 probable ATP-binding/permease fusion ABC transporter; ABC transporter-like protein 3598391 5748868 Daci_3283 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001564306.1 3596391 D 398578 CDS YP_001564307.1 160898725 5748869 3598393..3599847 1 NC_010002.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: mms:mma_3478 outer membrane efflux protein; RND efflux system outer membrane lipoprotein 3599847 5748869 Daci_3284 Delftia acidovorans SPH-1 RND efflux system outer membrane lipoprotein YP_001564307.1 3598393 D 398578 CDS YP_001564308.1 160898726 5748870 complement(3599918..3601192) 1 NC_010002.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: aav:Aave_3077 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 3601192 5748870 Daci_3285 Delftia acidovorans SPH-1 acyl-CoA dehydrogenase domain-containing protein YP_001564308.1 3599918 R 398578 CDS YP_001564309.1 160898727 5748871 complement(3601275..3602360) 1 NC_010002.1 PFAM: aminoglycoside phosphotransferase; KEGG: ajs:Ajs_1778 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 3602360 5748871 Daci_3286 Delftia acidovorans SPH-1 aminoglycoside phosphotransferase YP_001564309.1 3601275 R 398578 CDS YP_001564310.1 160898728 5748872 complement(3602512..3603231) 1 NC_010002.1 PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: aav:Aave_3075 transcriptional regulator, Crp/Fnr family; Crp/FNR family transcriptional regulator 3603231 5748872 Daci_3287 Delftia acidovorans SPH-1 Crp/FNR family transcriptional regulator YP_001564310.1 3602512 R 398578 CDS YP_001564311.1 160898729 5748873 complement(3603402..3604895) 1 NC_010002.1 converts 3-hydroxyadipyl-CoA to beta-ketoadipyl-CoA in phenylacetate degradation; 3-hydroxyacyl-CoA dehydrogenase 3604895 5748873 Daci_3288 Delftia acidovorans SPH-1 3-hydroxyacyl-CoA dehydrogenase YP_001564311.1 3603402 R 398578 CDS YP_001564312.1 160898730 5748874 3604948..3607701 1 NC_010002.1 KEGG: aav:Aave_3072 hypothetical protein; hypothetical protein 3607701 5748874 Daci_3289 Delftia acidovorans SPH-1 hypothetical protein YP_001564312.1 3604948 D 398578 CDS YP_001564313.1 160898731 5748875 complement(3607764..3608687) 1 NC_010002.1 KEGG: aav:Aave_3071 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase 3608687 5748875 Daci_3290 Delftia acidovorans SPH-1 thiamine-phosphate pyrophosphorylase YP_001564313.1 3607764 R 398578 CDS YP_001564314.1 160898732 5748876 complement(3608699..3609541) 1 NC_010002.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 3609541 thiG 5748876 thiG Delftia acidovorans SPH-1 thiazole synthase YP_001564314.1 3608699 R 398578 CDS YP_001564315.1 160898733 5748877 complement(3609541..3609738) 1 NC_010002.1 TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: aav:Aave_3069 thiamine biosynthesis protein ThiS; thiamine biosynthesis protein ThiS 3609738 5748877 Daci_3292 Delftia acidovorans SPH-1 thiamine biosynthesis protein ThiS YP_001564315.1 3609541 R 398578 CDS YP_001564316.1 160898734 5748878 complement(3609858..3611054) 1 NC_010002.1 PFAM: FAD dependent oxidoreductase; KEGG: aav:Aave_3068 FAD dependent oxidoreductase; FAD dependent oxidoreductase 3611054 5748878 Daci_3293 Delftia acidovorans SPH-1 FAD dependent oxidoreductase YP_001564316.1 3609858 R 398578 CDS YP_001564317.1 160898735 5748879 3611331..3612212 1 NC_010002.1 KEGG: ajs:Ajs_1787 phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; phosphomethylpyrimidine kinase 3612212 5748879 Daci_3294 Delftia acidovorans SPH-1 phosphomethylpyrimidine kinase YP_001564317.1 3611331 D 398578 CDS YP_001564318.1 160898736 5748880 complement(3612234..3612710) 1 NC_010002.1 PFAM: protein of unknown function DUF1058; SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: ajs:Ajs_1788 SH3, type 3 domain protein; hypothetical protein 3612710 5748880 Daci_3295 Delftia acidovorans SPH-1 hypothetical protein YP_001564318.1 3612234 R 398578 CDS YP_001564319.1 160898737 5748881 3612912..3613676 1 NC_010002.1 PFAM: Ankyrin; KEGG: pap:PSPA7_2741 hypothetical protein; ankyrin 3613676 5748881 Daci_3296 Delftia acidovorans SPH-1 ankyrin YP_001564319.1 3612912 D 398578 CDS YP_001564320.1 160898738 5748882 3613791..3615992 1 NC_010002.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pae:PA1322 probable TonB-dependent receptor; TonB-dependent siderophore receptor 3615992 5748882 Daci_3297 Delftia acidovorans SPH-1 TonB-dependent siderophore receptor YP_001564320.1 3613791 D 398578 CDS YP_001564321.1 160898739 5748883 complement(3616171..3616956) 1 NC_010002.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: ajs:Ajs_1673 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 3616956 5748883 Daci_3298 Delftia acidovorans SPH-1 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001564321.1 3616171 R 398578 CDS YP_001564322.1 160898740 5748884 complement(3617038..3617319) 1 NC_010002.1 PFAM: BolA family protein; KEGG: ajs:Ajs_1674 BolA family protein; BolA family protein 3617319 5748884 Daci_3299 Delftia acidovorans SPH-1 BolA family protein YP_001564322.1 3617038 R 398578 CDS YP_001564323.1 160898741 5748885 complement(3617316..3617915) 1 NC_010002.1 Involved in cell division; probably involved in intracellular septation; intracellular septation protein A 3617915 5748885 Daci_3300 Delftia acidovorans SPH-1 intracellular septation protein A YP_001564323.1 3617316 R 398578 CDS YP_001564324.1 160898742 5748886 complement(3618042..3618455) 1 NC_010002.1 TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; KEGG: ajs:Ajs_1676 methionine-R-sulfoxide reductase; methionine-R-sulfoxide reductase 3618455 5748886 Daci_3301 Delftia acidovorans SPH-1 methionine-R-sulfoxide reductase YP_001564324.1 3618042 R 398578 CDS YP_001564325.1 160898743 5748887 complement(3618452..3619984) 1 NC_010002.1 PFAM: protein of unknown function UPF0061; KEGG: aav:Aave_2947 protein of unknown function UPF0061; hypothetical protein 3619984 5748887 Daci_3302 Delftia acidovorans SPH-1 hypothetical protein YP_001564325.1 3618452 R 398578 CDS YP_001564326.1 160898744 5748888 complement(3620054..3621070) 1 NC_010002.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bra:BRADO5131 putative transcriptional regulator, AraC/XylS family; AraC family transcriptional regulator 3621070 5748888 Daci_3303 Delftia acidovorans SPH-1 AraC family transcriptional regulator YP_001564326.1 3620054 R 398578 CDS YP_001564327.1 160898745 5748889 3621261..3622973 1 NC_010002.1 PFAM: Carboxylesterase type B; KEGG: gka:GK3049 thermostable carboxylesterase; carboxylesterase type B 3622973 5748889 Daci_3304 Delftia acidovorans SPH-1 carboxylesterase type B YP_001564327.1 3621261 D 398578 CDS YP_001564328.1 160898746 5748890 3623052..3624887 1 NC_010002.1 PFAM: peptidase S15; X-Pro dipeptidyl-peptidase domain protein; KEGG: nfa:nfa43000 putative esterase; X-Pro dipeptidyl-peptidase domain-containing protein 3624887 5748890 Daci_3305 Delftia acidovorans SPH-1 X-Pro dipeptidyl-peptidase domain-containing protein YP_001564328.1 3623052 D 398578 CDS YP_001564329.1 160898747 5748891 3624999..3626636 1 NC_010002.1 activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 3626636 5748891 Daci_3306 Delftia acidovorans SPH-1 long-chain-fatty-acid--CoA ligase YP_001564329.1 3624999 D 398578 CDS YP_001564330.1 160898748 5748892 3626806..3628041 1 NC_010002.1 PFAM: Extracellular ligand-binding receptor; KEGG: ajs:Ajs_1679 extracellular ligand-binding receptor; extracellular ligand-binding receptor 3628041 5748892 Daci_3307 Delftia acidovorans SPH-1 extracellular ligand-binding receptor YP_001564330.1 3626806 D 398578 CDS YP_001564331.1 160898749 5748893 3628283..3629518 1 NC_010002.1 KEGG: ajs:Ajs_1679 extracellular ligand-binding receptor; extracellular ligand-binding receptor 3629518 5748893 Daci_3308 Delftia acidovorans SPH-1 extracellular ligand-binding receptor YP_001564331.1 3628283 D 398578 CDS YP_001564332.1 160898750 5748894 3629571..3630524 1 NC_010002.1 PFAM: inner-membrane translocator; KEGG: ajs:Ajs_1680 inner-membrane translocator; inner-membrane translocator 3630524 5748894 Daci_3309 Delftia acidovorans SPH-1 inner-membrane translocator YP_001564332.1 3629571 D 398578 CDS YP_001564333.1 160898751 5748895 3630529..3631893 1 NC_010002.1 PFAM: inner-membrane translocator; KEGG: ajs:Ajs_1681 inner-membrane translocator; inner-membrane translocator 3631893 5748895 Daci_3310 Delftia acidovorans SPH-1 inner-membrane translocator YP_001564333.1 3630529 D 398578 CDS YP_001564334.1 160898752 5748896 3631897..3632724 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_1682 ABC transporter related; ABC transporter-like protein 3632724 5748896 Daci_3311 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001564334.1 3631897 D 398578 CDS YP_001564335.1 160898753 5748897 3632735..3633430 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_2930 ABC transporter-related protein; ABC transporter-like protein 3633430 5748897 Daci_3312 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001564335.1 3632735 D 398578 CDS YP_001564336.1 160898754 5748898 3633581..3635692 1 NC_010002.1 PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: ajs:Ajs_1684 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; NAD-binding 3-hydroxyacyl-CoA dehydrogenase 3635692 5748898 Daci_3313 Delftia acidovorans SPH-1 NAD-binding 3-hydroxyacyl-CoA dehydrogenase YP_001564336.1 3633581 D 398578 CDS YP_001564337.1 160898755 5748899 3635752..3636927 1 NC_010002.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 3636927 5748899 Daci_3314 Delftia acidovorans SPH-1 acetyl-CoA acetyltransferase YP_001564337.1 3635752 D 398578 CDS YP_001564338.1 160898756 5748900 3636943..3638880 1 NC_010002.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: ajs:Ajs_1687 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 3638880 5748900 Daci_3315 Delftia acidovorans SPH-1 acyl-CoA dehydrogenase domain-containing protein YP_001564338.1 3636943 D 398578 CDS YP_001564339.1 160898757 5748901 complement(3638950..3639345) 1 NC_010002.1 KEGG: aav:Aave_1402 hypothetical protein; hypothetical protein 3639345 5748901 Daci_3316 Delftia acidovorans SPH-1 hypothetical protein YP_001564339.1 3638950 R 398578 CDS YP_001564340.1 160898758 5748902 complement(3639568..3640395) 1 NC_010002.1 KEGG: aav:Aave_1401 hypothetical protein; hypothetical protein 3640395 5748902 Daci_3317 Delftia acidovorans SPH-1 hypothetical protein YP_001564340.1 3639568 R 398578 CDS YP_001564341.1 160898759 5748903 complement(3640950..3641423) 1 NC_010002.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bch:Bcen2424_3651 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3641423 5748903 Daci_3318 Delftia acidovorans SPH-1 N-acetyltransferase GCN5 YP_001564341.1 3640950 R 398578 CDS YP_001564342.1 160898760 5748904 complement(3641582..3641839) 1 NC_010002.1 hypothetical protein 3641839 5748904 Daci_3319 Delftia acidovorans SPH-1 hypothetical protein YP_001564342.1 3641582 R 398578 CDS YP_001564343.1 160898761 5748905 complement(3641830..3642528) 1 NC_010002.1 KEGG: xac:XAC4135 hypothetical protein; hypothetical protein 3642528 5748905 Daci_3320 Delftia acidovorans SPH-1 hypothetical protein YP_001564343.1 3641830 R 398578 CDS YP_001564344.1 160898762 5748906 3642666..3643709 1 NC_010002.1 KEGG: sen:SACE_4995 hypothetical protein; hypothetical protein 3643709 5748906 Daci_3321 Delftia acidovorans SPH-1 hypothetical protein YP_001564344.1 3642666 D 398578 CDS YP_001564345.1 160898763 5748907 complement(3643796..3645871) 1 NC_010002.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; pyridoxamine 5'-phosphate oxidase-related FMN-binding; FAD-binding 9 siderophore-interacting domain protein; KEGG: bxe:Bxe_B0926 putative oxidoreductase; oxidoreductase FAD/NAD(P)-binding subunit 3645871 5748907 Daci_3322 Delftia acidovorans SPH-1 oxidoreductase FAD/NAD(P)-binding subunit YP_001564345.1 3643796 R 398578 CDS YP_001564346.1 160898764 5748908 complement(3645918..3646601) 1 NC_010002.1 PFAM: Glutathione S-transferase domain; KEGG: rle:RL1425 putative glutathione S-transferase; glutathione S-transferase domain-containing protein 3646601 5748908 Daci_3323 Delftia acidovorans SPH-1 glutathione S-transferase domain-containing protein YP_001564346.1 3645918 R 398578 CDS YP_001564347.1 160898765 5748909 3646731..3647630 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B0927 transcriptional regulator, LysR family; LysR family transcriptional regulator 3647630 5748909 Daci_3324 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001564347.1 3646731 D 398578 CDS YP_001564348.1 160898766 5748910 complement(3647647..3647892) 1 NC_010002.1 KEGG: rso:RS04682 hypothetical protein; hypothetical protein 3647892 5748910 Daci_3325 Delftia acidovorans SPH-1 hypothetical protein YP_001564348.1 3647647 R 398578 CDS YP_001564349.1 160898767 5748911 3648022..3649356 1 NC_010002.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: FecR protein; sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: ppf:Pput_0896 anti-FecI sigma factor, FecR; anti-FecI sigma factor FecR 3649356 5748911 Daci_3326 Delftia acidovorans SPH-1 anti-FecI sigma factor FecR YP_001564349.1 3648022 D 398578 CDS YP_001564350.1 160898768 5748912 3649462..3651876 1 NC_010002.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: reu:Reut_B3686 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 3651876 5748912 Daci_3327 Delftia acidovorans SPH-1 TonB-dependent siderophore receptor YP_001564350.1 3649462 D 398578 CDS YP_001564351.1 160898769 5748913 complement(3651901..3653442) 1 NC_010002.1 PFAM: major facilitator superfamily MFS_1; KEGG: bmv:BMASAVP1_0279 drug resistance transporter, EmrB/QacA family; major facilitator transporter 3653442 5748913 Daci_3328 Delftia acidovorans SPH-1 major facilitator transporter YP_001564351.1 3651901 R 398578 CDS YP_001564352.1 160898770 5748914 3653542..3654513 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfo:Pfl_0141 transcriptional regulator, LysR family; LysR family transcriptional regulator 3654513 5748914 Daci_3329 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001564352.1 3653542 D 398578 CDS YP_001564353.1 160898771 5748915 3654488..3655072 1 NC_010002.1 PFAM: NADPH-dependent FMN reductase; flavodoxin/nitric oxide synthase; KEGG: ajs:Ajs_1688 NAD(P)H dehydrogenase (quinone); flavodoxin/nitric oxide synthase 3655072 5748915 Daci_3330 Delftia acidovorans SPH-1 flavodoxin/nitric oxide synthase YP_001564353.1 3654488 D 398578 CDS YP_001564354.1 160898772 5748916 complement(3655131..3656363) 1 NC_010002.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein 3656363 5748916 Daci_3331 Delftia acidovorans SPH-1 hypothetical protein YP_001564354.1 3655131 R 398578 CDS YP_001564355.1 160898773 5748917 complement(3656480..3656941) 1 NC_010002.1 hypothetical protein 3656941 5748917 Daci_3332 Delftia acidovorans SPH-1 hypothetical protein YP_001564355.1 3656480 R 398578 CDS YP_001564356.1 160898774 5748918 complement(3656945..3657577) 1 NC_010002.1 PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: bur:Bcep18194_A3957 N-acetylmuramoyl-L-alanine amidase, family 2; N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD 3657577 5748918 Daci_3333 Delftia acidovorans SPH-1 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD YP_001564356.1 3656945 R 398578 CDS YP_001564357.1 160898775 5748919 complement(3657765..3658712) 1 NC_010002.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: reh:H16_A0216 integral membrane protein; hypothetical protein 3658712 5748919 Daci_3334 Delftia acidovorans SPH-1 hypothetical protein YP_001564357.1 3657765 R 398578 CDS YP_001564358.1 160898776 5748920 3658843..3659781 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_A0215 transcriptional regulator, LysR-family; LysR family transcriptional regulator 3659781 5748920 Daci_3335 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001564358.1 3658843 D 398578 CDS YP_001564359.1 160898777 5748921 complement(3659778..3661343) 1 NC_010002.1 TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_1689 phosphonate ABC transporter, inner membrane subunit; phosphonate ABC transporter inner membrane subunit 3661343 5748921 Daci_3336 Delftia acidovorans SPH-1 phosphonate ABC transporter inner membrane subunit YP_001564359.1 3659778 R 398578 CDS YP_001564360.1 160898778 5748922 complement(3661334..3662158) 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_1690 ABC transporter related; ABC transporter-like protein 3662158 5748922 Daci_3337 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001564360.1 3661334 R 398578 CDS YP_001564361.1 160898779 5748923 complement(3662178..3663062) 1 NC_010002.1 TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: dar:Daro_1826 phosphonate-binding periplasmic protein; phosphonate ABC transporter periplasmic phosphonate-binding protein 3663062 5748923 Daci_3338 Delftia acidovorans SPH-1 phosphonate ABC transporter periplasmic phosphonate-binding protein YP_001564361.1 3662178 R 398578 CDS YP_001564362.1 160898780 5748924 complement(3663227..3664393) 1 NC_010002.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: aav:Aave_1397 mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; mandelate racemase/muconate lactonizing protein 3664393 5748924 Daci_3339 Delftia acidovorans SPH-1 mandelate racemase/muconate lactonizing protein YP_001564362.1 3663227 R 398578 CDS YP_001564363.1 160898781 5748925 complement(3664430..3665137) 1 NC_010002.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: aav:Aave_1396 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3665137 5748925 Daci_3340 Delftia acidovorans SPH-1 short-chain dehydrogenase/reductase SDR YP_001564363.1 3664430 R 398578 CDS YP_001564364.1 160898782 5748926 complement(3665127..3666104) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: aav:Aave_1395 uncharacterized protein UPF0065; hypothetical protein 3666104 5748926 Daci_3341 Delftia acidovorans SPH-1 hypothetical protein YP_001564364.1 3665127 R 398578 CDS YP_001564365.1 160898783 5748927 complement(3666227..3667165) 1 NC_010002.1 PFAM: dihydrodipicolinate synthetase; KEGG: aav:Aave_1393 dihydrodipicolinate synthetase; dihydrodipicolinate synthetase 3667165 5748927 Daci_3342 Delftia acidovorans SPH-1 dihydrodipicolinate synthetase YP_001564365.1 3666227 R 398578 CDS YP_001564366.1 160898784 5748928 3667316..3668311 1 NC_010002.1 PFAM: regulatory protein LysR; KEGG: aav:Aave_1392 transcriptional regulator, LysR family; LysR family transcriptional regulator 3668311 5748928 Daci_3343 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001564366.1 3667316 D 398578 CDS YP_001564367.1 160898785 5748929 3668747..3670429 1 NC_010002.1 TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: ecx:EcHS_A3815 L-lactate permease; L-lactate permease 3670429 5748929 Daci_3344 Delftia acidovorans SPH-1 L-lactate permease YP_001564367.1 3668747 D 398578 CDS YP_001564368.1 160898786 5748930 3670615..3671421 1 NC_010002.1 represses the lctPRD operon; DNA-binding transcriptional repressor LldR 3671421 5748930 Daci_3345 Delftia acidovorans SPH-1 DNA-binding transcriptional repressor LldR YP_001564368.1 3670615 D 398578 CDS YP_001564369.1 160898787 5748931 3671432..3672571 1 NC_010002.1 flavin mononucleotide-dependent dehydrogenase; functions in aerobic respiration and also has a role in anaerobic nitrate respiration; L-lactate dehydrogenase 3672571 lldD 5748931 lldD Delftia acidovorans SPH-1 L-lactate dehydrogenase YP_001564369.1 3671432 D 398578 CDS YP_001564370.1 160898788 5748932 3672568..3674322 1 NC_010002.1 component of the membrane-bound D-lactate oxidase, FAD-binding, NADH independent; D-lactate dehydrogenase 3674322 5748932 Daci_3347 Delftia acidovorans SPH-1 D-lactate dehydrogenase YP_001564370.1 3672568 D 398578 CDS YP_001564371.1 160898789 5748933 complement(3674365..3674487) 1 NC_010002.1 KEGG: ajs:Ajs_2957 putative transcriptional regulator; putative transcriptional regulator 3674487 5748933 Daci_3348 Delftia acidovorans SPH-1 putative transcriptional regulator YP_001564371.1 3674365 R 398578 CDS YP_001564372.1 160898790 5748934 complement(3674514..3676187) 1 NC_010002.1 PFAM: peptidase S41; peptidase S41 3676187 5748934 Daci_3349 Delftia acidovorans SPH-1 peptidase S41 YP_001564372.1 3674514 R 398578 CDS YP_001564373.1 160898791 5748935 complement(3676230..3677738) 1 NC_010002.1 PFAM: Aldehyde Dehydrogenase_; KEGG: azo:azo2250 probable succinate semialdehyde dehydrogenase [NAD(P)+]; aldehyde dehydrogenase 3677738 5748935 Daci_3350 Delftia acidovorans SPH-1 aldehyde dehydrogenase YP_001564373.1 3676230 R 398578 CDS YP_001564374.1 160898792 5748936 complement(3677781..3678662) 1 NC_010002.1 KEGG: azo:azo2845 conserved hypothetical secreted protein; hypothetical protein 3678662 5748936 Daci_3351 Delftia acidovorans SPH-1 hypothetical protein YP_001564374.1 3677781 R 398578 CDS YP_001564375.1 160898793 5748937 complement(3678779..3680902) 1 NC_010002.1 TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; KEGG: pol:Bpro_5302 pyrrolo-quinoline quinone; methanol/ethanol family PQQ-dependent dehydrogenase 3680902 5748937 Daci_3352 Delftia acidovorans SPH-1 methanol/ethanol family PQQ-dependent dehydrogenase YP_001564375.1 3678779 R 398578 CDS YP_001564376.1 160898794 5748938 complement(3681045..3683255) 1 NC_010002.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bbr:BB0832 probable TonB-dependent receptor; TonB-dependent receptor plug 3683255 5748938 Daci_3353 Delftia acidovorans SPH-1 TonB-dependent receptor plug YP_001564376.1 3681045 R 398578 CDS YP_001564377.1 160898795 5748939 3683369..3684547 1 NC_010002.1 PFAM: helix-turn-helix Fis-type; KEGG: mpt:Mpe_A0340 transcriptional activator of acetoin/glycerol metabolism-like protein; Fis family transcriptional regulator 3684547 5748939 Daci_3354 Delftia acidovorans SPH-1 Fis family transcriptional regulator YP_001564377.1 3683369 D 398578 CDS YP_001564378.1 160898796 5748940 complement(3684558..3685475) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rme:Rmet_1175 transcriptional regulator, LysR family; LysR family transcriptional regulator 3685475 5748940 Daci_3355 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001564378.1 3684558 R 398578 CDS YP_001564379.1 160898797 5748941 3685581..3686906 1 NC_010002.1 PFAM: enolase; KEGG: rme:Rmet_1176 enolase; phosphopyruvate hydratase 3686906 5748941 Daci_3356 Delftia acidovorans SPH-1 phosphopyruvate hydratase YP_001564379.1 3685581 D 398578 CDS YP_001564380.1 160898798 5748942 complement(3686861..3687820) 1 NC_010002.1 KEGG: ajs:Ajs_2094 conserved hypothetical protein 95; hypothetical protein 3687820 5748942 Daci_3357 Delftia acidovorans SPH-1 hypothetical protein YP_001564380.1 3686861 R 398578 CDS YP_001564381.1 160898799 5748943 complement(3687997..3688305) 1 NC_010002.1 KEGG: aav:Aave_3399 hypothetical protein; hypothetical protein 3688305 5748943 Daci_3358 Delftia acidovorans SPH-1 hypothetical protein YP_001564381.1 3687997 R 398578 CDS YP_001564382.1 160898800 5748944 3688476..3689195 1 NC_010002.1 TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: rpd:RPD_4087 methylated-DNA--protein-cysteine methyltransferase; methylated-DNA--protein-cysteine methyltransferase 3689195 5748944 Daci_3359 Delftia acidovorans SPH-1 methylated-DNA--protein-cysteine methyltransferase YP_001564382.1 3688476 D 398578 CDS YP_001564383.1 160898801 5748945 3689333..3690124 1 NC_010002.1 Involved in the nonphosphorylative, ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate; gluconate 5-dehydrogenase 3690124 5748945 Daci_3360 Delftia acidovorans SPH-1 gluconate 5-dehydrogenase YP_001564383.1 3689333 D 398578 CDS YP_001564384.1 160898802 5748946 3690219..3690665 1 NC_010002.1 PFAM: thioesterase superfamily protein; KEGG: vei:Veis_2354 uncharacterized domain 1; thioesterase superfamily protein 3690665 5748946 Daci_3361 Delftia acidovorans SPH-1 thioesterase superfamily protein YP_001564384.1 3690219 D 398578 CDS YP_001564385.1 160898803 5748947 3690764..3691783 1 NC_010002.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: aav:Aave_2871 alcohol dehydrogenase, zinc-binding domain protein; alcohol dehydrogenase 3691783 5748947 Daci_3362 Delftia acidovorans SPH-1 alcohol dehydrogenase YP_001564385.1 3690764 D 398578 CDS YP_001564386.1 160898804 5748948 3691975..3692880 1 NC_010002.1 probable dehydrogenase; hypothetical protein 3692880 5748948 Daci_3363 Delftia acidovorans SPH-1 hypothetical protein YP_001564386.1 3691975 D 398578 CDS YP_001564387.1 160898805 5748949 complement(3692884..3693606) 1 NC_010002.1 PFAM: protein of unknown function DUF1566; KEGG: ajs:Ajs_1701 protein of unknown function DUF1566; hypothetical protein 3693606 5748949 Daci_3364 Delftia acidovorans SPH-1 hypothetical protein YP_001564387.1 3692884 R 398578 CDS YP_001564388.1 160898806 5748950 3693752..3695062 1 NC_010002.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: aav:Aave_1867 drug resistance transporter, Bcr/CflA subfamily; Bcr/CflA subfamily drug resistance transporter 3695062 5748950 Daci_3365 Delftia acidovorans SPH-1 Bcr/CflA subfamily drug resistance transporter YP_001564388.1 3693752 D 398578 CDS YP_001564389.1 160898807 5748951 3695059..3696483 1 NC_010002.1 PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_1703 major facilitator superfamily MFS_1; major facilitator transporter 3696483 5748951 Daci_3366 Delftia acidovorans SPH-1 major facilitator transporter YP_001564389.1 3695059 D 398578 CDS YP_001564390.1 160898808 5748952 3696575..3698017 1 NC_010002.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: ajs:Ajs_2836 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 3698017 5748952 Daci_3367 Delftia acidovorans SPH-1 RND family efflux transporter MFP subunit YP_001564390.1 3696575 D 398578 CDS YP_001564391.1 160898809 5748953 3698036..3701233 1 NC_010002.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: ajs:Ajs_2837 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; hydrophobe/amphiphile efflux-1 family protein 3701233 5748953 Daci_3368 Delftia acidovorans SPH-1 hydrophobe/amphiphile efflux-1 family protein YP_001564391.1 3698036 D 398578 CDS YP_001564392.1 160898810 5748954 3701230..3702699 1 NC_010002.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: ajs:Ajs_2838 RND efflux system, outer membrane lipoprotein, NodT family; RND efflux system outer membrane lipoprotein 3702699 5748954 Daci_3369 Delftia acidovorans SPH-1 RND efflux system outer membrane lipoprotein YP_001564392.1 3701230 D 398578 CDS YP_001564393.1 160898811 5748955 3702750..3703079 1 NC_010002.1 KEGG: mpt:Mpe_A3555 hypothetical protein; hypothetical protein 3703079 5748955 Daci_3370 Delftia acidovorans SPH-1 hypothetical protein YP_001564393.1 3702750 D 398578 CDS YP_001564394.1 160898812 5748956 complement(3703064..3704188) 1 NC_010002.1 PFAM: protein of unknown function DUF72; KEGG: aav:Aave_1869 protein of unknown function DUF72; hypothetical protein 3704188 5748956 Daci_3371 Delftia acidovorans SPH-1 hypothetical protein YP_001564394.1 3703064 R 398578 CDS YP_001564395.1 160898813 5748957 3704474..3705601 1 NC_010002.1 PFAM: regulator of chromosome condensation RCC1; KEGG: mxa:MXAN_0889 RCC1 repeat domain protein; chromosome condensation regulator RCC1 3705601 5748957 Daci_3372 Delftia acidovorans SPH-1 chromosome condensation regulator RCC1 YP_001564395.1 3704474 D 398578 CDS YP_001564396.1 160898814 5748958 3705625..3707361 1 NC_010002.1 PFAM: multicopper oxidase type 2; multicopper oxidase type 3; KEGG: art:Arth_4421 multicopper oxidase, type 3; multicopper oxidase type 2 3707361 5748958 Daci_3373 Delftia acidovorans SPH-1 multicopper oxidase type 2 YP_001564396.1 3705625 D 398578 CDS YP_001564397.1 160898815 5748959 3707541..3709901 1 NC_010002.1 PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: ajs:Ajs_1707 RNA binding S1 domain protein; RNA-binding S1 domain-containing protein 3709901 5748959 Daci_3374 Delftia acidovorans SPH-1 RNA-binding S1 domain-containing protein YP_001564397.1 3707541 D 398578 CDS YP_001564398.1 160898816 5748960 3709930..3710769 1 NC_010002.1 PFAM: Metal-dependent hydrolase HDOD; KEGG: ajs:Ajs_1708 putative signal transduction protein; putative signal transduction protein 3710769 5748960 Daci_3375 Delftia acidovorans SPH-1 putative signal transduction protein YP_001564398.1 3709930 D 398578 CDS YP_001564399.1 160898817 5748961 complement(3710790..3712022) 1 NC_010002.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: ajs:Ajs_1968 Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein 3712022 5748961 Daci_3376 Delftia acidovorans SPH-1 Sel1 domain-containing protein YP_001564399.1 3710790 R 398578 CDS YP_001564400.1 160898818 5748962 complement(3712062..3713822) 1 NC_010002.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: ajs:Ajs_1969 hypothetical protein; peptidoglycan-binding domain-containing protein 3713822 5748962 Daci_3377 Delftia acidovorans SPH-1 peptidoglycan-binding domain-containing protein YP_001564400.1 3712062 R 398578 CDS YP_001564401.1 160898819 5748963 complement(3713940..3714362) 1 NC_010002.1 KEGG: ajs:Ajs_1970 hypothetical protein; hypothetical protein 3714362 5748963 Daci_3378 Delftia acidovorans SPH-1 hypothetical protein YP_001564401.1 3713940 R 398578 CDS YP_001564402.1 160898820 5748964 complement(3714461..3714946) 1 NC_010002.1 KEGG: ajs:Ajs_1971 hypothetical protein; hypothetical protein 3714946 5748964 Daci_3379 Delftia acidovorans SPH-1 hypothetical protein YP_001564402.1 3714461 R 398578 CDS YP_001564403.1 160898821 5748965 3715604..3716383 1 NC_010002.1 PFAM: regulatory protein LuxR; response regulator receiver; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: pol:Bpro_2543 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 3716383 5748965 Daci_3380 Delftia acidovorans SPH-1 two component LuxR family transcriptional regulator YP_001564403.1 3715604 D 398578 CDS YP_001564404.1 160898822 5748966 3716459..3717376 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; KEGG: pol:Bpro_2542 periplasmic sensor signal transduction histidine kinase; putative signal transduction histidine kinase 3717376 5748966 Daci_3381 Delftia acidovorans SPH-1 putative signal transduction histidine kinase YP_001564404.1 3716459 D 398578 CDS YP_001564405.1 160898823 5748967 3717522..3720161 1 NC_010002.1 PFAM: protein of unknown function UPF0118; GAF domain protein; KEGG: ajs:Ajs_1892 putative GAF sensor protein; putative phytochrome sensor protein 3720161 5748967 Daci_3382 Delftia acidovorans SPH-1 putative phytochrome sensor protein YP_001564405.1 3717522 D 398578 CDS YP_001564406.1 160898824 5748968 complement(3720169..3721305) 1 NC_010002.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: pol:Bpro_2526 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 3721305 5748968 Daci_3383 Delftia acidovorans SPH-1 iron-containing alcohol dehydrogenase YP_001564406.1 3720169 R 398578 CDS YP_001564407.1 160898825 5748969 3721597..3722601 1 NC_010002.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: ajs:Ajs_1713 alpha/beta hydrolase fold-3 domain protein; alpha/beta hydrolase domain-containing protein 3722601 5748969 Daci_3384 Delftia acidovorans SPH-1 alpha/beta hydrolase domain-containing protein YP_001564407.1 3721597 D 398578 CDS YP_001564408.1 160898826 5748970 3722672..3723535 1 NC_010002.1 PFAM: GCN5-related N-acetyltransferase; thioesterase superfamily protein; KEGG: ajs:Ajs_1714 thioesterase superfamily protein; N-acetyltransferase GCN5 3723535 5748970 Daci_3385 Delftia acidovorans SPH-1 N-acetyltransferase GCN5 YP_001564408.1 3722672 D 398578 CDS YP_001564409.1 160898827 5748971 complement(3723571..3724518) 1 NC_010002.1 TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); KEGG: ajs:Ajs_1715 glycine cleavage T protein (aminomethyl transferase); folate-binding protein YgfZ 3724518 5748971 Daci_3386 Delftia acidovorans SPH-1 folate-binding protein YgfZ YP_001564409.1 3723571 R 398578 CDS YP_001564410.1 160898828 5748972 3724589..3725578 1 NC_010002.1 PFAM: aminodeoxychorismate lyase; KEGG: vei:Veis_1004 aminodeoxychorismate lyase; aminodeoxychorismate lyase 3725578 5748972 Daci_3387 Delftia acidovorans SPH-1 aminodeoxychorismate lyase YP_001564410.1 3724589 D 398578 CDS YP_001564411.1 160898829 5748973 3725636..3726322 1 NC_010002.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 3726322 tmk 5748973 tmk Delftia acidovorans SPH-1 thymidylate kinase YP_001564411.1 3725636 D 398578 CDS YP_001564412.1 160898830 5748974 3726319..3727368 1 NC_010002.1 KEGG: aav:Aave_3411 DNA-directed DNA polymerase; DNA-directed DNA polymerase 3727368 5748974 Daci_3389 Delftia acidovorans SPH-1 DNA-directed DNA polymerase YP_001564412.1 3726319 D 398578 CDS YP_001564413.1 160898831 5748975 3727508..3727867 1 NC_010002.1 PFAM: type IV pilus assembly PilZ; KEGG: aav:Aave_3410 type IV pilus assembly PilZ; type IV pilus assembly PilZ 3727867 5748975 Daci_3390 Delftia acidovorans SPH-1 type IV pilus assembly PilZ YP_001564413.1 3727508 D 398578 CDS YP_001564414.1 160898832 5748976 3727891..3728763 1 NC_010002.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: aav:Aave_3409 hydrolase, TatD family; TatD family hydrolase 3728763 5748976 Daci_3391 Delftia acidovorans SPH-1 TatD family hydrolase YP_001564414.1 3727891 D 398578 CDS YP_001564415.1 160898833 5748977 3728754..3729497 1 NC_010002.1 PFAM: Ankyrin; KEGG: aav:Aave_3408 ankyrin; ankyrin 3729497 5748977 Daci_3392 Delftia acidovorans SPH-1 ankyrin YP_001564415.1 3728754 D 398578 CDS YP_001564416.1 160898834 5748978 complement(3729543..3731360) 1 NC_010002.1 KEGG: aav:Aave_3407 lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; TIGRFAM: lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA 3731360 5748978 Daci_3393 Delftia acidovorans SPH-1 lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA YP_001564416.1 3729543 R 398578 CDS YP_001564417.1 160898835 5748979 3731544..3732869 1 NC_010002.1 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 3732869 tolB 5748979 tolB Delftia acidovorans SPH-1 translocation protein TolB YP_001564417.1 3731544 D 398578 CDS YP_001564418.1 160898836 5748980 3732947..3733489 1 NC_010002.1 TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: ajs:Ajs_1724 TonB box domain protein; peptidoglycan-associated lipoprotein 3733489 5748980 Daci_3395 Delftia acidovorans SPH-1 peptidoglycan-associated lipoprotein YP_001564418.1 3732947 D 398578 CDS YP_001564419.1 160898837 5748981 3733489..3734271 1 NC_010002.1 TIGRFAM: tol-pal system protein YbgF; PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: aav:Aave_3404 tetratricopeptide TPR_2 repeat protein; tol-pal system protein YbgF 3734271 5748981 Daci_3396 Delftia acidovorans SPH-1 tol-pal system protein YbgF YP_001564419.1 3733489 D 398578 CDS YP_001564420.1 160898838 5748982 3734271..3735098 1 NC_010002.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: aav:Aave_3403 UBA/ThiF-type NAD/FAD binding protein; UBA/THIF-type NAD/FAD-binding protein 3735098 5748982 Daci_3397 Delftia acidovorans SPH-1 UBA/THIF-type NAD/FAD-binding protein YP_001564420.1 3734271 D 398578 CDS YP_001564421.1 160898839 5748984 complement(3735342..3735797) 1 NC_010002.1 hypothetical protein 3735797 5748984 Daci_3398 Delftia acidovorans SPH-1 hypothetical protein YP_001564421.1 3735342 R 398578 CDS YP_001564422.1 160898840 5748985 complement(3735880..3736404) 1 NC_010002.1 KEGG: csa:Csal_0002 DNA polymerase III, beta subunit; hypothetical protein 3736404 5748985 Daci_3399 Delftia acidovorans SPH-1 hypothetical protein YP_001564422.1 3735880 R 398578 CDS YP_001564423.1 160898841 5748986 complement(3736448..3736729) 1 NC_010002.1 hypothetical protein 3736729 5748986 Daci_3400 Delftia acidovorans SPH-1 hypothetical protein YP_001564423.1 3736448 R 398578 CDS YP_001564424.1 160898842 5748987 complement(3736938..3737453) 1 NC_010002.1 hypothetical protein 3737453 5748987 Daci_3401 Delftia acidovorans SPH-1 hypothetical protein YP_001564424.1 3736938 R 398578 CDS YP_001564425.1 160898843 5748988 complement(3737450..3737656) 1 NC_010002.1 KEGG: ecp:ECP_4546 hypothetical protein; hypothetical protein 3737656 5748988 Daci_3402 Delftia acidovorans SPH-1 hypothetical protein YP_001564425.1 3737450 R 398578 CDS YP_001564426.1 160898844 5748989 complement(3737649..3737930) 1 NC_010002.1 hypothetical protein 3737930 5748989 Daci_3403 Delftia acidovorans SPH-1 hypothetical protein YP_001564426.1 3737649 R 398578 CDS YP_001564427.1 160898845 5748990 complement(3737924..3738499) 1 NC_010002.1 hypothetical protein 3738499 5748990 Daci_3404 Delftia acidovorans SPH-1 hypothetical protein YP_001564427.1 3737924 R 398578 CDS YP_001564428.1 160898846 5748991 complement(3738567..3740000) 1 NC_010002.1 SMART: DEAD-like helicases; KEGG: xfa:XF0680 hypothetical protein; helicase-like protein 3740000 5748991 Daci_3405 Delftia acidovorans SPH-1 helicase-like protein YP_001564428.1 3738567 R 398578 CDS YP_001564429.1 160898847 5748992 complement(3740225..3740614) 1 NC_010002.1 hypothetical protein 3740614 5748992 Daci_3406 Delftia acidovorans SPH-1 hypothetical protein YP_001564429.1 3740225 R 398578 CDS YP_001564430.1 160898848 5748993 complement(3740628..3740912) 1 NC_010002.1 PFAM: VRR-NUC domain protein; KEGG: cbf:CLI_2427 VRR-NUC domain protein; VRR-NUC domain-containing protein 3740912 5748993 Daci_3407 Delftia acidovorans SPH-1 VRR-NUC domain-containing protein YP_001564430.1 3740628 R 398578 CDS YP_001564431.1 160898849 5748994 complement(3741217..3741783) 1 NC_010002.1 KEGG: sec:SC0331 endodeoxyribonuclease; endodeoxyribonuclease 3741783 5748994 Daci_3408 Delftia acidovorans SPH-1 endodeoxyribonuclease YP_001564431.1 3741217 R 398578 CDS YP_001564432.1 160898850 5748995 complement(3741780..3742001) 1 NC_010002.1 hypothetical protein 3742001 5748995 Daci_3409 Delftia acidovorans SPH-1 hypothetical protein YP_001564432.1 3741780 R 398578 CDS YP_001564433.1 160898851 5748996 complement(3741998..3742948) 1 NC_010002.1 KEGG: hit:NTHI1489 hypothetical protein; hypothetical protein 3742948 5748996 Daci_3410 Delftia acidovorans SPH-1 hypothetical protein YP_001564433.1 3741998 R 398578 CDS YP_001564434.1 160898852 5748997 complement(3743035..3745149) 1 NC_010002.1 SMART: DNA-directed DNA polymerase; KEGG: xfa:XF0683 phage-related DNA polymerase; DNA-directed DNA polymerase 3745149 5748997 Daci_3411 Delftia acidovorans SPH-1 DNA-directed DNA polymerase YP_001564434.1 3743035 R 398578 CDS YP_001564435.1 160898853 5748998 complement(3745146..3745580) 1 NC_010002.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: sfr:Sfri_3571 CMP/dCMP deaminase, zinc-binding; CMP/dCMP deaminase 3745580 5748998 Daci_3412 Delftia acidovorans SPH-1 CMP/dCMP deaminase YP_001564435.1 3745146 R 398578 CDS YP_001564436.1 160898854 5748999 complement(3745643..3746578) 1 NC_010002.1 Required for efficient pilin antigenic variation; recombination associated protein 3746578 rdgC 5748999 rdgC Delftia acidovorans SPH-1 recombination associated protein YP_001564436.1 3745643 R 398578 CDS YP_001564437.1 160898855 5749000 complement(3746590..3746904) 1 NC_010002.1 PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: pna:Pnap_3939 histone-like nucleoid-structuring protein H-NS; histone family protein nucleoid-structuring protein H-NS 3746904 5749000 Daci_3414 Delftia acidovorans SPH-1 histone family protein nucleoid-structuring protein H-NS YP_001564437.1 3746590 R 398578 CDS YP_001564438.1 160898856 5749001 complement(3746973..3747659) 1 NC_010002.1 KEGG: xft:PD1725 hypothetical protein; hypothetical protein 3747659 5749001 Daci_3415 Delftia acidovorans SPH-1 hypothetical protein YP_001564438.1 3746973 R 398578 CDS YP_001564439.1 160898857 5749002 complement(3747721..3749112) 1 NC_010002.1 KEGG: xft:PD1724 hypothetical protein; hypothetical protein 3749112 5749002 Daci_3416 Delftia acidovorans SPH-1 hypothetical protein YP_001564439.1 3747721 R 398578 CDS YP_001564440.1 160898858 5749003 complement(3749182..3749847) 1 NC_010002.1 KEGG: tcr:506269.40 mucin-associated surface protein (MASP) Pfam: Mucin SerH PROSITE: ALA_RICH GLU_RICH; hypothetical protein 3749847 5749003 Daci_3417 Delftia acidovorans SPH-1 hypothetical protein YP_001564440.1 3749182 R 398578 CDS YP_001564441.1 160898859 5749004 3750020..3750214 1 NC_010002.1 hypothetical protein 3750214 5749004 Daci_3418 Delftia acidovorans SPH-1 hypothetical protein YP_001564441.1 3750020 D 398578 CDS YP_001564442.1 160898860 5749005 3750207..3750518 1 NC_010002.1 hypothetical protein 3750518 5749005 Daci_3419 Delftia acidovorans SPH-1 hypothetical protein YP_001564442.1 3750207 D 398578 CDS YP_001564443.1 160898861 5749006 3750520..3750789 1 NC_010002.1 hypothetical protein 3750789 5749006 Daci_3420 Delftia acidovorans SPH-1 hypothetical protein YP_001564443.1 3750520 D 398578 CDS YP_001564444.1 160898862 5749007 3750786..3751112 1 NC_010002.1 hypothetical protein 3751112 5749007 Daci_3421 Delftia acidovorans SPH-1 hypothetical protein YP_001564444.1 3750786 D 398578 CDS YP_001564445.1 160898863 5749008 3751109..3751444 1 NC_010002.1 hypothetical protein 3751444 5749008 Daci_3422 Delftia acidovorans SPH-1 hypothetical protein YP_001564445.1 3751109 D 398578 CDS YP_001564446.1 160898864 5749009 complement(3751659..3752096) 1 NC_010002.1 hypothetical protein 3752096 5749009 Daci_3423 Delftia acidovorans SPH-1 hypothetical protein YP_001564446.1 3751659 R 398578 CDS YP_001564447.1 160898865 5749010 3752222..3752536 1 NC_010002.1 hypothetical protein 3752536 5749010 Daci_3424 Delftia acidovorans SPH-1 hypothetical protein YP_001564447.1 3752222 D 398578 CDS YP_001564448.1 160898866 5749011 3752671..3752988 1 NC_010002.1 hypothetical protein 3752988 5749011 Daci_3425 Delftia acidovorans SPH-1 hypothetical protein YP_001564448.1 3752671 D 398578 CDS YP_001564449.1 160898867 5749012 3753413..3755986 1 NC_010002.1 TIGRFAM: phage/plasmid primase, P4 family; PFAM: primase P4 ; Primase 2; KEGG: bcl:ABC1368 hypothetical protein; P4 family phage/plasmid primase 3755986 5749012 Daci_3426 Delftia acidovorans SPH-1 P4 family phage/plasmid primase YP_001564449.1 3753413 D 398578 CDS YP_001564450.1 160898868 5749013 3755997..3756611 1 NC_010002.1 hypothetical protein 3756611 5749013 Daci_3427 Delftia acidovorans SPH-1 hypothetical protein YP_001564450.1 3755997 D 398578 CDS YP_001564451.1 160898869 5749014 complement(3758740..3759309) 1 NC_010002.1 hypothetical protein 3759309 5749014 Daci_3428 Delftia acidovorans SPH-1 hypothetical protein YP_001564451.1 3758740 R 398578 CDS YP_001564452.1 160898870 5749015 3760491..3760976 1 NC_010002.1 hypothetical protein 3760976 5749015 Daci_3429 Delftia acidovorans SPH-1 hypothetical protein YP_001564452.1 3760491 D 398578 CDS YP_001564453.1 160898871 5749016 3760973..3763219 1 NC_010002.1 PFAM: terminase GpA; KEGG: stm:STM1031 hypothetical protein; terminase GpA 3763219 5749016 Daci_3430 Delftia acidovorans SPH-1 terminase GpA YP_001564453.1 3760973 D 398578 CDS YP_001564454.1 160898872 5749017 3763674..3763916 1 NC_010002.1 hypothetical protein 3763916 5749017 Daci_3431 Delftia acidovorans SPH-1 hypothetical protein YP_001564454.1 3763674 D 398578 CDS YP_001564455.1 160898873 5749018 3763916..3765682 1 NC_010002.1 TIGRFAM: phage portal protein, lambda family; PFAM: portal protein lambda; KEGG: eba:ebA7269 phage portal protein, lambda family; lambda family phage portal protein 3765682 5749018 Daci_3432 Delftia acidovorans SPH-1 lambda family phage portal protein YP_001564455.1 3763916 D 398578 CDS YP_001564456.1 160898874 5749019 3765933..3766424 1 NC_010002.1 KEGG: aav:Aave_1723 hypothetical protein; hypothetical protein 3766424 5749019 Daci_3433 Delftia acidovorans SPH-1 hypothetical protein YP_001564456.1 3765933 D 398578 CDS YP_001564457.1 160898875 5749020 3766434..3766940 1 NC_010002.1 KEGG: pmy:Pmen_3954 hypothetical protein; hypothetical protein 3766940 5749020 Daci_3434 Delftia acidovorans SPH-1 hypothetical protein YP_001564457.1 3766434 D 398578 CDS YP_001564458.1 160898876 5749021 3767612..3767980 1 NC_010002.1 hypothetical protein 3767980 5749021 Daci_3435 Delftia acidovorans SPH-1 hypothetical protein YP_001564458.1 3767612 D 398578 CDS YP_001564459.1 160898877 5749022 3768479..3768760 1 NC_010002.1 hypothetical protein 3768760 5749022 Daci_3436 Delftia acidovorans SPH-1 hypothetical protein YP_001564459.1 3768479 D 398578 CDS YP_001564460.1 160898878 5749023 3768837..3769874 1 NC_010002.1 PFAM: peptidase S14 ClpP; KEGG: sbm:Shew185_0756 peptidase S14 ClpP; peptidase S14 ClpP 3769874 5749023 Daci_3437 Delftia acidovorans SPH-1 peptidase S14 ClpP YP_001564460.1 3768837 D 398578 CDS YP_001564461.1 160898879 5749024 3769877..3770521 1 NC_010002.1 KEGG: rsp:RSP_2757 hypothetical protein; hypothetical protein 3770521 5749024 Daci_3438 Delftia acidovorans SPH-1 hypothetical protein YP_001564461.1 3769877 D 398578 CDS YP_001564462.1 160898880 5749025 3770554..3771579 1 NC_010002.1 KEGG: tcx:Tcr_0682 hypothetical protein; hypothetical protein 3771579 5749025 Daci_3439 Delftia acidovorans SPH-1 hypothetical protein YP_001564462.1 3770554 D 398578 CDS YP_001564463.1 160898881 5749026 3771591..3771899 1 NC_010002.1 hypothetical protein 3771899 5749026 Daci_3440 Delftia acidovorans SPH-1 hypothetical protein YP_001564463.1 3771591 D 398578 CDS YP_001564464.1 160898882 5749027 3771899..3772540 1 NC_010002.1 hypothetical protein 3772540 5749027 Daci_3441 Delftia acidovorans SPH-1 hypothetical protein YP_001564464.1 3771899 D 398578 CDS YP_001564465.1 160898883 5749028 3772537..3773025 1 NC_010002.1 hypothetical protein 3773025 5749028 Daci_3442 Delftia acidovorans SPH-1 hypothetical protein YP_001564465.1 3772537 D 398578 CDS YP_001564466.1 160898884 5749029 3773125..3773880 1 NC_010002.1 KEGG: son:SO_0679 hypothetical protein; hypothetical protein 3773880 5749029 Daci_3443 Delftia acidovorans SPH-1 hypothetical protein YP_001564466.1 3773125 D 398578 CDS YP_001564467.1 160898885 5749030 3775330..3778044 1 NC_010002.1 TIGRFAM: phage tape measure protein; KEGG: mfa:Mfla_2689 hypothetical protein; phage tape measure protein 3778044 5749030 Daci_3444 Delftia acidovorans SPH-1 phage tape measure protein YP_001564467.1 3775330 D 398578 CDS YP_001564468.1 160898886 5749031 3778041..3778433 1 NC_010002.1 KEGG: rso:RSc0874 probable transmembrane protein; putative transmembrane protein 3778433 5749031 Daci_3445 Delftia acidovorans SPH-1 putative transmembrane protein YP_001564468.1 3778041 D 398578 CDS YP_001564469.1 160898887 5749033 3782231..3783406 1 NC_010002.1 KEGG: aav:Aave_4096 hypothetical protein; hypothetical protein 3783406 5749033 Daci_3448 Delftia acidovorans SPH-1 hypothetical protein YP_001564469.1 3782231 D 398578 CDS YP_001564470.1 160898888 5749034 3783406..3784881 1 NC_010002.1 KEGG: aav:Aave_4095 hypothetical protein; hypothetical protein 3784881 5749034 Daci_3449 Delftia acidovorans SPH-1 hypothetical protein YP_001564470.1 3783406 D 398578 CDS YP_001564471.1 160898889 5749035 3784878..3785309 1 NC_010002.1 KEGG: aav:Aave_4094 hypothetical protein; hypothetical protein 3785309 5749035 Daci_3450 Delftia acidovorans SPH-1 hypothetical protein YP_001564471.1 3784878 D 398578 CDS YP_001564472.1 160898890 5749036 3785313..3787205 1 NC_010002.1 KEGG: aav:Aave_4093 hypothetical protein; hypothetical protein 3787205 5749036 Daci_3451 Delftia acidovorans SPH-1 hypothetical protein YP_001564472.1 3785313 D 398578 CDS YP_001564473.1 160898891 5749037 3787407..3787958 1 NC_010002.1 KEGG: eba:ebA7267 putative lysozyme; putative lysozyme 3787958 5749037 Daci_3452 Delftia acidovorans SPH-1 putative lysozyme YP_001564473.1 3787407 D 398578 CDS YP_001564474.1 160898892 5749038 3787955..3788491 1 NC_010002.1 hypothetical protein 3788491 5749038 Daci_3453 Delftia acidovorans SPH-1 hypothetical protein YP_001564474.1 3787955 D 398578 CDS YP_001564475.1 160898893 5749039 complement(3788476..3788769) 1 NC_010002.1 hypothetical protein 3788769 5749039 Daci_3454 Delftia acidovorans SPH-1 hypothetical protein YP_001564475.1 3788476 R 398578 CDS YP_001564476.1 160898894 5749040 complement(3788766..3789065) 1 NC_010002.1 hypothetical protein 3789065 5749040 Daci_3455 Delftia acidovorans SPH-1 hypothetical protein YP_001564476.1 3788766 R 398578 CDS YP_001564477.1 160898895 5749041 complement(3789067..3789297) 1 NC_010002.1 hypothetical protein 3789297 5749041 Daci_3456 Delftia acidovorans SPH-1 hypothetical protein YP_001564477.1 3789067 R 398578 CDS YP_001564478.1 160898896 5749042 complement(3789329..3790138) 1 NC_010002.1 hypothetical protein 3790138 5749042 Daci_3457 Delftia acidovorans SPH-1 hypothetical protein YP_001564478.1 3789329 R 398578 CDS YP_001564479.1 160898897 5749043 complement(3790138..3790338) 1 NC_010002.1 hypothetical protein 3790338 5749043 Daci_3458 Delftia acidovorans SPH-1 hypothetical protein YP_001564479.1 3790138 R 398578 CDS YP_001564480.1 160898898 5749044 complement(3790335..3791381) 1 NC_010002.1 KEGG: pic:PICST_31634 repressed by TUP1 protein 1; hypothetical protein 3791381 5749044 Daci_3459 Delftia acidovorans SPH-1 hypothetical protein YP_001564480.1 3790335 R 398578 CDS YP_001564481.1 160898899 5749045 complement(3791378..3791590) 1 NC_010002.1 KEGG: ajs:Ajs_3336 hypothetical protein; hypothetical protein 3791590 5749045 Daci_3460 Delftia acidovorans SPH-1 hypothetical protein YP_001564481.1 3791378 R 398578 CDS YP_001564482.1 160898900 5749046 complement(3791686..3792993) 1 NC_010002.1 PFAM: integrase family protein; KEGG: ajs:Ajs_3340 phage integrase family protein; integrase family protein 3792993 5749046 Daci_3461 Delftia acidovorans SPH-1 integrase family protein YP_001564482.1 3791686 R 398578 CDS YP_001564483.1 160898901 5749047 complement(3793606..3794298) 1 NC_010002.1 hypothetical protein 3794298 5749047 Daci_3462 Delftia acidovorans SPH-1 hypothetical protein YP_001564483.1 3793606 R 398578 CDS YP_001564484.1 160898902 5749048 3795600..3795905 1 NC_010002.1 hypothetical protein 3795905 5749048 Daci_3463 Delftia acidovorans SPH-1 hypothetical protein YP_001564484.1 3795600 D 398578 CDS YP_001564485.1 160898903 5749049 3795912..3796403 1 NC_010002.1 KEGG: bbr:BB0749 putative lipoprotein; hypothetical protein 3796403 5749049 Daci_3464 Delftia acidovorans SPH-1 hypothetical protein YP_001564485.1 3795912 D 398578 CDS YP_001564486.1 160898904 5749050 3796507..3796929 1 NC_010002.1 KEGG: bte:BTH_II1046 ClpP protease; hypothetical protein 3796929 5749050 Daci_3465 Delftia acidovorans SPH-1 hypothetical protein YP_001564486.1 3796507 D 398578 CDS YP_001564487.1 160898905 5749051 complement(3797495..3798592) 1 NC_010002.1 KEGG: mmu:100041170 similar to loricrin; hypothetical protein 3798592 5749051 Daci_3466 Delftia acidovorans SPH-1 hypothetical protein YP_001564487.1 3797495 R 398578 CDS YP_001564488.1 160898906 5749052 complement(3798971..3800101) 1 NC_010002.1 PFAM: Choloylglycine hydrolase; KEGG: bvi:Bcep1808_5029 choloylglycine hydrolase; choloylglycine hydrolase 3800101 5749052 Daci_3467 Delftia acidovorans SPH-1 choloylglycine hydrolase YP_001564488.1 3798971 R 398578 CDS YP_001564489.1 160898907 5749053 complement(3800296..3800499) 1 NC_010002.1 hypothetical protein 3800499 5749053 Daci_3468 Delftia acidovorans SPH-1 hypothetical protein YP_001564489.1 3800296 R 398578 CDS YP_001564490.1 160898908 5749054 3800771..3801247 1 NC_010002.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bra:BRADO5978 putative histone acetyltransferase (HAT); N-acetyltransferase GCN5 3801247 5749054 Daci_3469 Delftia acidovorans SPH-1 N-acetyltransferase GCN5 YP_001564490.1 3800771 D 398578 CDS YP_001564491.1 160898909 5749055 3801293..3802690 1 NC_010002.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); KEGG: ajs:Ajs_0352 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; 3-phosphoshikimate 1-carboxyvinyltransferase 3802690 5749055 Daci_3470 Delftia acidovorans SPH-1 3-phosphoshikimate 1-carboxyvinyltransferase YP_001564491.1 3801293 D 398578 CDS YP_001564492.1 160898910 5749056 complement(3802715..3803107) 1 NC_010002.1 hypothetical protein 3803107 5749056 Daci_3471 Delftia acidovorans SPH-1 hypothetical protein YP_001564492.1 3802715 R 398578 CDS YP_001564493.1 160898911 5749057 3803218..3803691 1 NC_010002.1 PFAM: Arc domain protein DNA binding domain protein; KEGG: bvi:Bcep1808_4550 Arc domain protein DNA binding domain protein; Arc domain-containing protein 3803691 5749057 Daci_3472 Delftia acidovorans SPH-1 Arc domain-containing protein YP_001564493.1 3803218 D 398578 CDS YP_001564494.1 160898912 5749058 3803823..3804002 1 NC_010002.1 PFAM: CsbD family protein; KEGG: pna:Pnap_3279 CsbD family protein; CsbD family protein 3804002 5749058 Daci_3473 Delftia acidovorans SPH-1 CsbD family protein YP_001564494.1 3803823 D 398578 CDS YP_001564495.1 160898913 5749059 complement(3804112..3805293) 1 NC_010002.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: reh:H16_A0406 hypothetical protein with GGDEF domain; diguanylate cyclase 3805293 5749059 Daci_3474 Delftia acidovorans SPH-1 diguanylate cyclase YP_001564495.1 3804112 R 398578 CDS YP_001564496.1 160898914 5749060 3805634..3807196 1 NC_010002.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: ajs:Ajs_3430 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3807196 5749060 Daci_3475 Delftia acidovorans SPH-1 methyl-accepting chemotaxis sensory transducer YP_001564496.1 3805634 D 398578 CDS YP_001564497.1 160898915 5749061 complement(3807683..3807976) 1 NC_010002.1 PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: aav:Aave_1150 histone family protein nucleoid-structuring protein H-NS; histone family protein nucleoid-structuring protein H-NS 3807976 5749061 Daci_3476 Delftia acidovorans SPH-1 histone family protein nucleoid-structuring protein H-NS YP_001564497.1 3807683 R 398578 CDS YP_001564498.1 160898916 5749062 3808777..3810597 1 NC_010002.1 PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: aav:Aave_0421 methyl-accepting chemotaxis sensory transducer; Cache sensor-containing methyl-accepting chemotaxis sensory transducer 3810597 5749062 Daci_3477 Delftia acidovorans SPH-1 Cache sensor-containing methyl-accepting chemotaxis sensory transducer YP_001564498.1 3808777 D 398578 CDS YP_001564499.1 160898917 5749063 complement(3810630..3812120) 1 NC_010002.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: spe:Spro_1181 diguanylate cyclase; diguanylate cyclase 3812120 5749063 Daci_3478 Delftia acidovorans SPH-1 diguanylate cyclase YP_001564499.1 3810630 R 398578 CDS YP_001564500.1 160898918 5749064 3812783..3813262 1 NC_010002.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: vei:Veis_0270 putative transcriptional regulator, AsnC family; AsnC family transcriptional regulator 3813262 5749064 Daci_3479 Delftia acidovorans SPH-1 AsnC family transcriptional regulator YP_001564500.1 3812783 D 398578 CDS YP_001564501.1 160898919 5749065 3813419..3815869 1 NC_010002.1 PFAM: peptidase S45 penicillin amidase; KEGG: aav:Aave_1140 peptidase S45, penicillin amidase; peptidase S45 penicillin amidase 3815869 5749065 Daci_3480 Delftia acidovorans SPH-1 peptidase S45 penicillin amidase YP_001564501.1 3813419 D 398578 CDS YP_001564502.1 160898920 5749066 complement(3815976..3817991) 1 NC_010002.1 TIGRFAM: selenide, water dikinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: bxe:Bxe_B2555 selenide water dikinase; selenide, water dikinase 3817991 5749066 Daci_3481 Delftia acidovorans SPH-1 selenide, water dikinase YP_001564502.1 3815976 R 398578 CDS YP_001564503.1 160898921 5749067 3818048..3818710 1 NC_010002.1 KEGG: ppu:PP_4671 hypothetical protein; hypothetical protein 3818710 5749067 Daci_3482 Delftia acidovorans SPH-1 hypothetical protein YP_001564503.1 3818048 D 398578 CDS YP_001564504.1 160898922 5749068 3818707..3819936 1 NC_010002.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: pau:PA14_49890 hypothetical protein; diguanylate cyclase 3819936 5749068 Daci_3483 Delftia acidovorans SPH-1 diguanylate cyclase YP_001564504.1 3818707 D 398578 CDS YP_001564505.1 160898923 5749069 3819938..3820444 1 NC_010002.1 PFAM: OmpA/MotB domain protein; KEGG: reh:H16_A2519 outer membrane protein and related peptidoglycan-associated proteins; OmpA/MotB domain-containing protein 3820444 5749069 Daci_3484 Delftia acidovorans SPH-1 OmpA/MotB domain-containing protein YP_001564505.1 3819938 D 398578 CDS YP_001564506.1 160898924 5749070 complement(3820762..3822693) 1 NC_010002.1 TIGRFAM: selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 2; Elongation factor SelB winged helix 3; KEGG: bxe:Bxe_B2548 translation elongation factor, selenocysteine-specific; selenocysteine-specific translation elongation factor 3822693 5749070 Daci_3485 Delftia acidovorans SPH-1 selenocysteine-specific translation elongation factor YP_001564506.1 3820762 R 398578 CDS YP_001564507.1 160898925 5749071 complement(3822704..3824158) 1 NC_010002.1 catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis; selenocysteine synthase 3824158 5749071 Daci_3486 Delftia acidovorans SPH-1 selenocysteine synthase YP_001564507.1 3822704 R 398578 CDS YP_001564508.1 160898926 5749072 complement(3824173..3825147) 1 NC_010002.1 TIGRFAM: formate dehydrogenase accessory protein FdhE; PFAM: formate dehydrogenase accessory protein; KEGG: bch:Bcen2424_3987 formate dehydrogenase accessory protein FdhE; formate dehydrogenase accessory protein FdhE 3825147 5749072 Daci_3487 Delftia acidovorans SPH-1 formate dehydrogenase accessory protein FdhE YP_001564508.1 3824173 R 398578 CDS YP_001564509.1 160898927 5749073 complement(3825360..3825986) 1 NC_010002.1 TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: dar:Daro_1816 formate dehydrogenase, gamma subunit; formate dehydrogenase subunit gamma 3825986 5749073 Daci_3488 Delftia acidovorans SPH-1 formate dehydrogenase subunit gamma YP_001564509.1 3825360 R 398578 CDS YP_001564510.1 160898928 5749074 complement(3825983..3826912) 1 NC_010002.1 TIGRFAM: formate dehydrogenase, beta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Formate dehydrogenase transmembrane domain protein; KEGG: bam:Bamb_3378 formate dehydrogenase, beta subunit; formate dehydrogenase subunit beta 3826912 5749074 Daci_3489 Delftia acidovorans SPH-1 formate dehydrogenase subunit beta YP_001564510.1 3825983 R 398578 CDS YP_001564511.1 160898929 5749075 complement(3826923..3829349) 1 NC_010002.1 KEGG: bam:Bamb_3377 formate dehydrogenase, alpha subunit; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; formate dehydrogenase subunit alpha 3829349 5749075 Daci_3490 Delftia acidovorans SPH-1 formate dehydrogenase subunit alpha YP_001564511.1 3826923 R 398578 CDS YP_001564512.1 160898930 5749076 complement(3829398..3829988) 1 NC_010002.1 PFAM: molybdopterin oxidoreductase Fe4S4 region; KEGG: bxe:Bxe_B2554 formate dehydrogenase-O, major subunit; molybdopterin oxidoreductase Fe4S4 region 3829988 5749076 Daci_3491 Delftia acidovorans SPH-1 molybdopterin oxidoreductase Fe4S4 region YP_001564512.1 3829398 R 398578 CDS YP_001564513.1 160898931 5749077 complement(3830346..3831509) 1 NC_010002.1 PFAM: protein of unknown function UPF0118; KEGG: ajs:Ajs_1821 protein of unknown function UPF0118; hypothetical protein 3831509 5749077 Daci_3492 Delftia acidovorans SPH-1 hypothetical protein YP_001564513.1 3830346 R 398578 CDS YP_001564514.1 160898932 5749078 3831741..3834620 1 NC_010002.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 3834620 sucA 5749078 sucA Delftia acidovorans SPH-1 2-oxoglutarate dehydrogenase E1 component YP_001564514.1 3831741 D 398578 CDS YP_001564515.1 160898933 5749079 3834675..3835940 1 NC_010002.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: ajs:Ajs_1823 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase 3835940 5749079 Daci_3494 Delftia acidovorans SPH-1 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase YP_001564515.1 3834675 D 398578 CDS YP_001564516.1 160898934 5749080 3836004..3837458 1 NC_010002.1 E3 component of 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 3837458 5749080 Daci_3495 Delftia acidovorans SPH-1 dihydrolipoamide dehydrogenase YP_001564516.1 3836004 D 398578 CDS YP_001564517.1 160898935 5749081 3837556..3838659 1 NC_010002.1 PFAM: AFG1-family ATPase; KEGG: ajs:Ajs_1825 AFG1-family ATPase; AFG1 family ATPase 3838659 5749081 Daci_3496 Delftia acidovorans SPH-1 AFG1 family ATPase YP_001564517.1 3837556 D 398578 CDS YP_001564518.1 160898936 5749082 3838700..3839428 1 NC_010002.1 KEGG: aav:Aave_3244 hypothetical protein; hypothetical protein 3839428 5749082 Daci_3497 Delftia acidovorans SPH-1 hypothetical protein YP_001564518.1 3838700 D 398578 CDS YP_001564519.1 160898937 5749083 complement(3839438..3840208) 1 NC_010002.1 SMART: protein phosphatase 2C domain protein; KEGG: ajs:Ajs_1827 protein phosphatase 2C domain protein; protein serine/threonine phosphatase 3840208 5749083 Daci_3498 Delftia acidovorans SPH-1 protein serine/threonine phosphatase YP_001564519.1 3839438 R 398578 CDS YP_001564520.1 160898938 5749084 3840345..3842519 1 NC_010002.1 SMART: helicase c2; DEAD-like helicases; KEGG: pol:Bpro_2617 helicase C2; helicase c2 3842519 5749084 Daci_3499 Delftia acidovorans SPH-1 helicase c2 YP_001564520.1 3840345 D 398578 CDS YP_001564521.1 160898939 5749085 complement(3842482..3843273) 1 NC_010002.1 KEGG: ajs:Ajs_1829 putative transmembrane protein; putative transmembrane protein 3843273 5749085 Daci_3500 Delftia acidovorans SPH-1 putative transmembrane protein YP_001564521.1 3842482 R 398578 CDS YP_001564522.1 160898940 5749086 3843435..3847019 1 NC_010002.1 KEGG: ajs:Ajs_1830 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein; DNA polymerase III subunit alpha 3847019 5749086 Daci_3501 Delftia acidovorans SPH-1 DNA polymerase III subunit alpha YP_001564522.1 3843435 D 398578 CDS YP_001564523.1 160898941 5749087 3847153..3847530 1 NC_010002.1 involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; ATP-dependent Clp protease adaptor protein ClpS 3847530 clpS 5749087 clpS Delftia acidovorans SPH-1 ATP-dependent Clp protease adaptor protein ClpS YP_001564523.1 3847153 D 398578 CDS YP_001564524.1 160898942 5749088 3847594..3849930 1 NC_010002.1 KEGG: ajs:Ajs_1832 ATP-dependent Clp protease, ATP-binding subunit ClpA; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATP-dependent Clp protease ATP-binding protein ClpA 3849930 5749088 Daci_3503 Delftia acidovorans SPH-1 ATP-dependent Clp protease ATP-binding protein ClpA YP_001564524.1 3847594 D 398578 CDS YP_001564525.1 160898943 5749089 3850014..3851468 1 NC_010002.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: xac:XAC0014 cardiolipin synthetase; phospholipase D/transphosphatidylase 3851468 5749089 Daci_3504 Delftia acidovorans SPH-1 phospholipase D/transphosphatidylase YP_001564525.1 3850014 D 398578 CDS YP_001564526.1 160898944 5749090 3851506..3852945 1 NC_010002.1 Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates; exonuclease I 3852945 sbcB 5749090 sbcB Delftia acidovorans SPH-1 exonuclease I YP_001564526.1 3851506 D 398578 CDS YP_001564527.1 160898945 5749091 complement(3853088..3854317) 1 NC_010002.1 PFAM: nucleoside recognition domain protein; KEGG: pfl:PFL_0096 nucleoside transporter; nucleoside recognition domain-containing protein 3854317 5749091 Daci_3506 Delftia acidovorans SPH-1 nucleoside recognition domain-containing protein YP_001564527.1 3853088 R 398578 CDS YP_001564528.1 160898946 5749092 3854466..3854861 1 NC_010002.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mlo:mll3737 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 3854861 5749092 Daci_3507 Delftia acidovorans SPH-1 glyoxalase/bleomycin resistance protein/dioxygenase YP_001564528.1 3854466 D 398578 CDS YP_001564529.1 160898947 5749093 complement(3854881..3855654) 1 NC_010002.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: reu:Reut_A3459 trans-aconitate 2-methyltransferase; trans-aconitate 2-methyltransferase 3855654 5749093 Daci_3508 Delftia acidovorans SPH-1 trans-aconitate 2-methyltransferase YP_001564529.1 3854881 R 398578 CDS YP_001564530.1 160898948 5749094 3855711..3856670 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: spe:Spro_2326 transcriptional regulator, LysR family; LysR family transcriptional regulator 3856670 5749094 Daci_3509 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001564530.1 3855711 D 398578 CDS YP_001564531.1 160898949 5749095 complement(3856680..3857597) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: vei:Veis_3047 transcriptional regulator, LysR family; LysR family transcriptional regulator 3857597 5749095 Daci_3510 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001564531.1 3856680 R 398578 CDS YP_001564532.1 160898950 5749096 3857664..3858542 1 NC_010002.1 PFAM: HpcH/HpaI aldolase; KEGG: vei:Veis_3048 citryl-CoA lyase; citrate (pro-3S)-lyase 3858542 5749096 Daci_3511 Delftia acidovorans SPH-1 citrate (pro-3S)-lyase YP_001564532.1 3857664 D 398578 CDS YP_001564533.1 160898951 5749097 3858624..3859628 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: vei:Veis_3049 uncharacterized protein UPF0065; hypothetical protein 3859628 5749097 Daci_3512 Delftia acidovorans SPH-1 hypothetical protein YP_001564533.1 3858624 D 398578 CDS YP_001564534.1 160898952 5749098 3859687..3860850 1 NC_010002.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: vei:Veis_3050 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 3860850 5749098 Daci_3513 Delftia acidovorans SPH-1 L-carnitine dehydratase/bile acid-inducible protein F YP_001564534.1 3859687 D 398578 CDS YP_001564535.1 160898953 5749099 3860850..3861671 1 NC_010002.1 PFAM: amidohydrolase 2; KEGG: bja:blr2281 putative 2-pyrone-4,6-dicarbaxylate hydrolase; amidohydrolase 2 3861671 5749099 Daci_3514 Delftia acidovorans SPH-1 amidohydrolase 2 YP_001564535.1 3860850 D 398578 CDS YP_001564536.1 160898954 5749100 3861735..3862727 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: reu:Reut_B3798 hypothetical protein; hypothetical protein 3862727 5749100 Daci_3515 Delftia acidovorans SPH-1 hypothetical protein YP_001564536.1 3861735 D 398578 CDS YP_001564537.1 160898955 5749101 complement(3862748..3862978) 1 NC_010002.1 KEGG: aav:Aave_2829 glucose sorbosone dehydrogenase; hypothetical protein 3862978 5749101 Daci_3516 Delftia acidovorans SPH-1 hypothetical protein YP_001564537.1 3862748 R 398578 CDS YP_001564538.1 160898956 5749102 3863152..3863853 1 NC_010002.1 PFAM: protein of unknown function DUF28; KEGG: pol:Bpro_2928 protein of unknown function DUF28; hypothetical protein 3863853 5749102 Daci_3517 Delftia acidovorans SPH-1 hypothetical protein YP_001564538.1 3863152 D 398578 CDS YP_001564539.1 160898957 5749103 complement(3863925..3864554) 1 NC_010002.1 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase 3864554 upp 5749103 upp Delftia acidovorans SPH-1 uracil phosphoribosyltransferase YP_001564539.1 3863925 R 398578 CDS YP_001564540.1 160898958 5749104 complement(3864611..3865630) 1 NC_010002.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: aav:Aave_3217 pyridoxal-5'-phosphate-dependent enzyme, beta subunit; pyridoxal-5'-phosphate-dependent protein subunit beta 3865630 5749104 Daci_3519 Delftia acidovorans SPH-1 pyridoxal-5'-phosphate-dependent protein subunit beta YP_001564540.1 3864611 R 398578 CDS YP_001564541.1 160898959 5749105 complement(3865736..3867262) 1 NC_010002.1 PFAM: protein of unknown function DUF853 NPT hydrolase putative; KEGG: aav:Aave_3204 protein of unknown function DUF853, NPT hydrolase putative; hypothetical protein 3867262 5749105 Daci_3520 Delftia acidovorans SPH-1 hypothetical protein YP_001564541.1 3865736 R 398578 CDS YP_001564542.1 160898960 5749106 3867341..3868060 1 NC_010002.1 PFAM: protein of unknown function DUF28; KEGG: ajs:Ajs_1898 protein of unknown function DUF28; hypothetical protein 3868060 5749106 Daci_3521 Delftia acidovorans SPH-1 hypothetical protein YP_001564542.1 3867341 D 398578 CDS YP_001564543.1 160898961 5749107 3868057..3869340 1 NC_010002.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 3869340 5749107 Daci_3522 Delftia acidovorans SPH-1 phosphoribosylamine--glycine ligase YP_001564543.1 3868057 D 398578 CDS YP_001564544.1 160898962 5749108 3869345..3870409 1 NC_010002.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 3870409 5749108 Daci_3523 Delftia acidovorans SPH-1 coproporphyrinogen III oxidase YP_001564544.1 3869345 D 398578 CDS YP_001564545.1 160898963 5749109 3870659..3871444 1 NC_010002.1 TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: aav:Aave_3200 iojap-like protein; iojap family protein 3871444 5749109 Daci_3524 Delftia acidovorans SPH-1 iojap family protein YP_001564545.1 3870659 D 398578 CDS YP_001564546.1 160898964 5749110 3871466..3871933 1 NC_010002.1 SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 3871933 5749110 Daci_3525 Delftia acidovorans SPH-1 rRNA large subunit methyltransferase YP_001564546.1 3871466 D 398578 CDS YP_001564547.1 160898965 5749111 3872061..3872675 1 NC_010002.1 TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: ajs:Ajs_1903 maf protein; maf protein 3872675 5749111 Daci_3526 Delftia acidovorans SPH-1 maf protein YP_001564547.1 3872061 D 398578 CDS YP_001564548.1 160898966 5749112 3872777..3874324 1 NC_010002.1 TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: aav:Aave_3196 ribonuclease, Rne/Rng family; ribonuclease 3874324 5749112 Daci_3527 Delftia acidovorans SPH-1 ribonuclease YP_001564548.1 3872777 D 398578 CDS YP_001564549.1 160898967 5749113 3874504..3876405 1 NC_010002.1 KEGG: hch:HCH_03141 hypothetical protein; hypothetical protein 3876405 5749113 Daci_3528 Delftia acidovorans SPH-1 hypothetical protein YP_001564549.1 3874504 D 398578 CDS YP_001564550.1 160898968 5749114 3876415..3877644 1 NC_010002.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: ccr:CC_0555 hypothetical protein; monooxygenase FAD-binding 3877644 5749114 Daci_3529 Delftia acidovorans SPH-1 monooxygenase FAD-binding YP_001564550.1 3876415 D 398578 CDS YP_001564551.1 160898969 5749115 complement(3877580..3878575) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: pna:Pnap_0869 uncharacterized protein UPF0065; hypothetical protein 3878575 5749115 Daci_3530 Delftia acidovorans SPH-1 hypothetical protein YP_001564551.1 3877580 R 398578 CDS YP_001564552.1 160898970 5749116 complement(3878976..3881198) 1 NC_010002.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bbr:BB3900 ferric alcaligin siderophore receptor; TonB-dependent siderophore receptor 3881198 5749116 Daci_3531 Delftia acidovorans SPH-1 TonB-dependent siderophore receptor YP_001564552.1 3878976 R 398578 CDS YP_001564553.1 160898971 5749117 complement(3881273..3882235) 1 NC_010002.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bbr:BB3898 transcriptional regulator; AraC family transcriptional regulator 3882235 5749117 Daci_3532 Delftia acidovorans SPH-1 AraC family transcriptional regulator YP_001564553.1 3881273 R 398578 CDS YP_001564554.1 160898972 5749118 complement(3882362..3884056) 1 NC_010002.1 PFAM: Tannase and feruloyl esterase; KEGG: bra:BRADO4865 putative feruloyl esterase; feruloyl esterase 3884056 5749118 Daci_3533 Delftia acidovorans SPH-1 feruloyl esterase YP_001564554.1 3882362 R 398578 CDS YP_001564555.1 160898973 5749119 complement(3884162..3885328) 1 NC_010002.1 catalyzes the transfer of an amino moiety; putative aminotransferase 3885328 5749119 Daci_3534 Delftia acidovorans SPH-1 putative aminotransferase YP_001564555.1 3884162 R 398578 CDS YP_001564556.1 160898974 5749120 complement(3885387..3886367) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_3166 transcriptional regulator, LysR family; transcriptional regulator CysB-like protein 3886367 5749120 Daci_3535 Delftia acidovorans SPH-1 transcriptional regulator CysB-like protein YP_001564556.1 3885387 R 398578 CDS YP_001564557.1 160898975 5749121 complement(3886393..3886806) 1 NC_010002.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: aav:Aave_3165 cobalamin (vitamin B12) biosynthesis CbiX protein; cobalamin (vitamin B12) biosynthesis CbiX protein 3886806 5749121 Daci_3536 Delftia acidovorans SPH-1 cobalamin (vitamin B12) biosynthesis CbiX protein YP_001564557.1 3886393 R 398578 CDS YP_001564558.1 160898976 5749122 complement(3886817..3887926) 1 NC_010002.1 PFAM: permease YjgP/YjgQ family protein; KEGG: aav:Aave_3164 permease YjgP/YjgQ family protein; YjgP/YjgQ family permease 3887926 5749122 Daci_3537 Delftia acidovorans SPH-1 YjgP/YjgQ family permease YP_001564558.1 3886817 R 398578 CDS YP_001564559.1 160898977 5749123 complement(3887926..3889053) 1 NC_010002.1 PFAM: permease YjgP/YjgQ family protein; KEGG: aav:Aave_3163 permease YjgP/YjgQ family protein; YjgP/YjgQ family permease 3889053 5749123 Daci_3538 Delftia acidovorans SPH-1 YjgP/YjgQ family permease YP_001564559.1 3887926 R 398578 CDS YP_001564560.1 160898978 5749124 3889077..3890654 1 NC_010002.1 PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: aav:Aave_3162 leucyl aminopeptidase; leucyl aminopeptidase 3890654 5749124 Daci_3539 Delftia acidovorans SPH-1 leucyl aminopeptidase YP_001564560.1 3889077 D 398578 CDS YP_001564561.1 160898979 5749125 3890700..3891131 1 NC_010002.1 PFAM: DNA polymerase III chi subunit HolC; KEGG: aav:Aave_3161 DNA polymerase III chi subunit, HolC; DNA polymerase III chi subunit HolC 3891131 5749125 Daci_3540 Delftia acidovorans SPH-1 DNA polymerase III chi subunit HolC YP_001564561.1 3890700 D 398578 CDS YP_001564562.1 160898980 5749126 complement(3891997..3893031) 1 NC_010002.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: pol:Bpro_2956 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 3893031 5749126 Daci_3541 Delftia acidovorans SPH-1 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_001564562.1 3891997 R 398578 CDS YP_001564563.1 160898981 5749128 complement(3894463..3894708) 1 NC_010002.1 PFAM: Prophage CP4-57 regulatory; KEGG: azo:azo2049 hypothetical protein; phage transcriptional regulator AlpA 3894708 5749128 Daci_3544 Delftia acidovorans SPH-1 phage transcriptional regulator AlpA YP_001564563.1 3894463 R 398578 CDS YP_001564564.1 160898982 5749129 complement(3894863..3895180) 1 NC_010002.1 KEGG: bbr:BB1668 modification methylase; hypothetical protein 3895180 5749129 Daci_3545 Delftia acidovorans SPH-1 hypothetical protein YP_001564564.1 3894863 R 398578 CDS YP_001564565.1 160898983 5749130 3895545..3895901 1 NC_010002.1 KEGG: bur:Bcep18194_B0821 hypothetical protein; hypothetical protein 3895901 5749130 Daci_3546 Delftia acidovorans SPH-1 hypothetical protein YP_001564565.1 3895545 D 398578 CDS YP_001564566.1 160898984 5749131 complement(3896468..3896896) 1 NC_010002.1 hypothetical protein 3896896 5749131 Daci_3547 Delftia acidovorans SPH-1 hypothetical protein YP_001564566.1 3896468 R 398578 CDS YP_001564567.1 160898985 5749132 3897095..3897391 1 NC_010002.1 KEGG: ret:RHE_PD00236 putative integrase protein; hypothetical protein 3897391 5749132 Daci_3548 Delftia acidovorans SPH-1 hypothetical protein YP_001564567.1 3897095 D 398578 CDS YP_001564568.1 160898986 5749133 3897432..3898082 1 NC_010002.1 PFAM: Integrase catalytic region; KEGG: rru:Rru_A1128 integrase, catalytic region; integrase catalytic subunit 3898082 5749133 Daci_3549 Delftia acidovorans SPH-1 integrase catalytic subunit YP_001564568.1 3897432 D 398578 CDS YP_001564569.1 160898987 5749134 complement(3898000..3899040) 1 NC_010002.1 PFAM: protein of unknown function DUF900 hydrolase family protein; KEGG: ter:Tery_2076 protein of unknown function DUF900, hydrolase-like; hypothetical protein 3899040 5749134 Daci_3550 Delftia acidovorans SPH-1 hypothetical protein YP_001564569.1 3898000 R 398578 CDS YP_001564570.1 160898988 5749135 3899465..3900193 1 NC_010002.1 KEGG: spu:578470 similar to SEC24 related gene family, member C (S. cerevisiae); hypothetical protein 3900193 5749135 Daci_3551 Delftia acidovorans SPH-1 hypothetical protein YP_001564570.1 3899465 D 398578 CDS YP_001564571.1 160898989 5749136 complement(3900287..3900685) 1 NC_010002.1 KEGG: rme:Rmet_0836 hypothetical protein; hypothetical protein 3900685 5749136 Daci_3552 Delftia acidovorans SPH-1 hypothetical protein YP_001564571.1 3900287 R 398578 CDS YP_001564572.1 160898990 5749137 complement(3900848..3901150) 1 NC_010002.1 KEGG: ccv:CCV52592_1309 hypothetical protein; hypothetical protein 3901150 5749137 Daci_3553 Delftia acidovorans SPH-1 hypothetical protein YP_001564572.1 3900848 R 398578 CDS YP_001564573.1 160898991 5749138 3901560..3901826 1 NC_010002.1 hypothetical protein 3901826 5749138 Daci_3554 Delftia acidovorans SPH-1 hypothetical protein YP_001564573.1 3901560 D 398578 CDS YP_001564574.1 160898992 5749139 3903616..3903987 1 NC_010002.1 hypothetical protein 3903987 5749139 Daci_3555 Delftia acidovorans SPH-1 hypothetical protein YP_001564574.1 3903616 D 398578 CDS YP_001564575.1 160898993 5749140 3903987..3905192 1 NC_010002.1 KEGG: bbr:BB2240 putative phage lysozyme; Phage-like lysozyme (muraminidase)-like protein 3905192 5749140 Daci_3556 Delftia acidovorans SPH-1 Phage-like lysozyme (muraminidase)-like protein YP_001564575.1 3903987 D 398578 CDS YP_001564576.1 160898994 5749141 3905404..3905730 1 NC_010002.1 KEGG: aav:Aave_2360 hypothetical protein; hypothetical protein 3905730 5749141 Daci_3557 Delftia acidovorans SPH-1 hypothetical protein YP_001564576.1 3905404 D 398578 CDS YP_001564577.1 160898995 5749142 complement(3906788..3907597) 1 NC_010002.1 KEGG: aav:Aave_1931 hypothetical protein; hypothetical protein 3907597 5749142 Daci_3558 Delftia acidovorans SPH-1 hypothetical protein YP_001564577.1 3906788 R 398578 CDS YP_001564578.1 160898996 5749143 complement(3907954..3908484) 1 NC_010002.1 KEGG: xac:XAC2267 hypothetical protein; hypothetical protein 3908484 5749143 Daci_3559 Delftia acidovorans SPH-1 hypothetical protein YP_001564578.1 3907954 R 398578 CDS YP_001564579.1 160898997 5749144 3909053..3909439 1 NC_010002.1 TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein; KEGG: nha:Nham_3430 CrcB protein; CrcB protein 3909439 5749144 Daci_3560 Delftia acidovorans SPH-1 CrcB protein YP_001564579.1 3909053 D 398578 CDS YP_001564580.1 160898998 5749145 3909618..3910175 1 NC_010002.1 KEGG: bra:BRADO5230 hypothetical protein; hypothetical protein 3910175 5749145 Daci_3561 Delftia acidovorans SPH-1 hypothetical protein YP_001564580.1 3909618 D 398578 CDS YP_001564581.1 160898999 5749146 complement(3910223..3911194) 1 NC_010002.1 PFAM: FecR protein; KEGG: pfl:PFL_2292 sigma factor regulatory protein FecR; anti-FecI sigma factor FecR 3911194 5749146 Daci_3562 Delftia acidovorans SPH-1 anti-FecI sigma factor FecR YP_001564581.1 3910223 R 398578 CDS YP_001564582.1 160899000 5749147 complement(3911199..3911747) 1 NC_010002.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: pfl:PFL_2291 RNA polymerase sigma factor FecI; ECF subfamily RNA polymerase sigma-24 factor 3911747 5749147 Daci_3563 Delftia acidovorans SPH-1 ECF subfamily RNA polymerase sigma-24 factor YP_001564582.1 3911199 R 398578 CDS YP_001564583.1 160899001 5749148 complement(3911929..3912351) 1 NC_010002.1 hypothetical protein 3912351 5749148 Daci_3564 Delftia acidovorans SPH-1 hypothetical protein YP_001564583.1 3911929 R 398578 CDS YP_001564584.1 160899002 5749149 complement(3912514..3913188) 1 NC_010002.1 Represses a number of genes involved in the response to DNA damage; LexA repressor 3913188 5749149 Daci_3565 Delftia acidovorans SPH-1 LexA repressor YP_001564584.1 3912514 R 398578 CDS YP_001564585.1 160899003 5749150 3913302..3914258 1 NC_010002.1 PFAM: Asparaginase/glutaminase; KEGG: aav:Aave_2559 asparaginase/glutaminase; asparaginase 3914258 5749150 Daci_3566 Delftia acidovorans SPH-1 asparaginase YP_001564585.1 3913302 D 398578 CDS YP_001564586.1 160899004 5749151 complement(3914350..3915006) 1 NC_010002.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 3915006 adk 5749151 adk Delftia acidovorans SPH-1 adenylate kinase YP_001564586.1 3914350 R 398578 CDS YP_001564587.1 160899005 5749152 complement(3915271..3916068) 1 NC_010002.1 KEGG: ajs:Ajs_2307 3-deoxy-D-manno-octulosonate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; 3-deoxy-D-manno-octulosonate cytidylyltransferase 3916068 5749152 Daci_3568 Delftia acidovorans SPH-1 3-deoxy-D-manno-octulosonate cytidylyltransferase YP_001564587.1 3915271 R 398578 CDS YP_001564588.1 160899006 5749153 complement(3916137..3916319) 1 NC_010002.1 PFAM: protein of unknown function DUF343; KEGG: ajs:Ajs_2306 protein of unknown function DUF343; hypothetical protein 3916319 5749153 Daci_3569 Delftia acidovorans SPH-1 hypothetical protein YP_001564588.1 3916137 R 398578 CDS YP_001564589.1 160899007 5749154 complement(3916384..3917400) 1 NC_010002.1 transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase 3917400 lpxK 5749154 lpxK Delftia acidovorans SPH-1 tetraacyldisaccharide 4'-kinase YP_001564589.1 3916384 R 398578 CDS YP_001564590.1 160899008 5749155 complement(3917414..3917839) 1 NC_010002.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: aav:Aave_2565 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 3917839 5749155 Daci_3571 Delftia acidovorans SPH-1 biopolymer transport protein ExbD/TolR YP_001564590.1 3917414 R 398578 CDS YP_001564591.1 160899009 5749156 complement(3917871..3918503) 1 NC_010002.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: ajs:Ajs_2303 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 3918503 5749156 Daci_3572 Delftia acidovorans SPH-1 MotA/TolQ/ExbB proton channel YP_001564591.1 3917871 R 398578 CDS YP_001564592.1 160899010 5749157 3918899..3920236 1 NC_010002.1 KEGG: ajs:Ajs_2302 exodeoxyribonuclease VII, large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII large subunit; nucleic acid binding OB-fold tRNA/helicase-type; exodeoxyribonuclease VII large subunit 3920236 5749157 Daci_3573 Delftia acidovorans SPH-1 exodeoxyribonuclease VII large subunit YP_001564592.1 3918899 D 398578 CDS YP_001564593.1 160899011 5749158 3920555..3921136 1 NC_010002.1 PFAM: manganese and iron superoxide dismutase; KEGG: aav:Aave_2568 superoxide dismutase; superoxide dismutase 3921136 5749158 Daci_3574 Delftia acidovorans SPH-1 superoxide dismutase YP_001564593.1 3920555 D 398578 CDS YP_001564594.1 160899012 5749159 complement(3921229..3922773) 1 NC_010002.1 PFAM: major facilitator superfamily MFS_1; KEGG: mms:mma_0501 MFS superfamily drug efflux transporter; major facilitator transporter 3922773 5749159 Daci_3575 Delftia acidovorans SPH-1 major facilitator transporter YP_001564594.1 3921229 R 398578 CDS YP_001564595.1 160899013 5749160 3922888..3923769 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mms:mma_0503 transcriptional regulator, LysR family; LysR family transcriptional regulator 3923769 5749160 Daci_3576 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001564595.1 3922888 D 398578 CDS YP_001564596.1 160899014 5749161 complement(3923804..3925024) 1 NC_010002.1 PFAM: major facilitator superfamily MFS_1; KEGG: pfl:PFL_4098 transporter, putative; major facilitator transporter 3925024 5749161 Daci_3577 Delftia acidovorans SPH-1 major facilitator transporter YP_001564596.1 3923804 R 398578 CDS YP_001564597.1 160899015 5749162 3925147..3925743 1 NC_010002.1 PFAM: regulatory protein TetR; KEGG: pfl:PFL_4099 transcriptional regulator, TetR family; TetR family transcriptional regulator 3925743 5749162 Daci_3578 Delftia acidovorans SPH-1 TetR family transcriptional regulator YP_001564597.1 3925147 D 398578 CDS YP_001564598.1 160899016 5749163 complement(3925796..3926656) 1 NC_010002.1 KEGG: ajs:Ajs_1632 PEP phosphonomutase; PEP phosphonomutase 3926656 5749163 Daci_3579 Delftia acidovorans SPH-1 PEP phosphonomutase YP_001564598.1 3925796 R 398578 CDS YP_001564599.1 160899017 5749164 complement(3926701..3927711) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: bbr:BB4843 hypothetical protein; hypothetical protein 3927711 5749164 Daci_3580 Delftia acidovorans SPH-1 hypothetical protein YP_001564599.1 3926701 R 398578 CDS YP_001564600.1 160899018 5749165 complement(3927756..3928751) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: reh:H16_B2001 probable extra-cytoplasmic solute receptor; hypothetical protein 3928751 5749165 Daci_3581 Delftia acidovorans SPH-1 hypothetical protein YP_001564600.1 3927756 R 398578 CDS YP_001564601.1 160899019 5749166 3928928..3930973 1 NC_010002.1 KEGG: reh:H16_A1904 propionate catabolism activator; TIGRFAM: PAS sensor protein; propionate catabolism operon regulatory protein PrpR; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; Propionate catabolism activator domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; AAA ATPase; Fis family proprionate catabolism activator 3930973 5749166 Daci_3582 Delftia acidovorans SPH-1 Fis family proprionate catabolism activator YP_001564601.1 3928928 D 398578 CDS YP_001564602.1 160899020 5749167 complement(3930983..3931843) 1 NC_010002.1 KEGG: aav:Aave_3441 hypothetical protein; hypothetical protein 3931843 5749167 Daci_3583 Delftia acidovorans SPH-1 hypothetical protein YP_001564602.1 3930983 R 398578 CDS YP_001564603.1 160899021 5749168 complement(3932010..3932942) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aci:ACIAD2742 putative transcriptional regulator; LysR family transcriptional regulator 3932942 5749168 Daci_3584 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001564603.1 3932010 R 398578 CDS YP_001564604.1 160899022 5749169 3933010..3933942 1 NC_010002.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: pen:PSEEN2008 L-serine dehydratase; pyridoxal-5'-phosphate-dependent protein subunit beta 3933942 5749169 Daci_3585 Delftia acidovorans SPH-1 pyridoxal-5'-phosphate-dependent protein subunit beta YP_001564604.1 3933010 D 398578 CDS YP_001564605.1 160899023 5749170 complement(3933959..3935155) 1 NC_010002.1 TIGRFAM: AcnD-accessory protein PrpF; PFAM: protein of unknown function DUF453; KEGG: ppu:PP_2337 hypothetical protein; AcnD-accessory protein PrpF 3935155 5749170 Daci_3586 Delftia acidovorans SPH-1 AcnD-accessory protein PrpF YP_001564605.1 3933959 R 398578 CDS YP_001564606.1 160899024 5749171 complement(3935155..3937782) 1 NC_010002.1 Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 3937782 5749171 Daci_3587 Delftia acidovorans SPH-1 aconitate hydratase YP_001564606.1 3935155 R 398578 CDS YP_001564607.1 160899025 5749172 complement(3937832..3938812) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: rme:Rmet_6149 twin-arginine translocation pathway signal; hypothetical protein 3938812 5749172 Daci_3588 Delftia acidovorans SPH-1 hypothetical protein YP_001564607.1 3937832 R 398578 CDS YP_001564608.1 160899026 5749173 3939289..3942651 1 NC_010002.1 KEGG: ajs:Ajs_2088 diguanylate cyclase/phosphodiesterase with PAS/PAC and CHASE sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 3942651 5749173 Daci_3589 Delftia acidovorans SPH-1 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_001564608.1 3939289 D 398578 CDS YP_001564609.1 160899027 5749174 3942698..3946312 1 NC_010002.1 TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; KEGG: aav:Aave_2843 chromosome segregation protein SMC; chromosome segregation protein SMC 3946312 5749174 Daci_3590 Delftia acidovorans SPH-1 chromosome segregation protein SMC YP_001564609.1 3942698 D 398578 CDS YP_001564610.1 160899028 5749175 3946370..3947716 1 NC_010002.1 FtsZ-binding region; SMART: ZipA FtsZ-binding region; KEGG: aav:Aave_2842 ZipA, C-terminal FtsZ-binding region; ZipA protein 3947716 5749175 Daci_3591 Delftia acidovorans SPH-1 ZipA protein YP_001564610.1 3946370 D 398578 CDS YP_001564611.1 160899029 5749176 3947764..3949875 1 NC_010002.1 KEGG: ajs:Ajs_2083 DNA ligase, NAD-dependent; TIGRFAM: DNA ligase, NAD-dependent; PFAM: helix-hairpin-helix motif; BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; NAD-dependent DNA ligase adenylation; SMART: Helix-hairpin-helix DNA-binding class 1; NAD-dependent DNA ligase; NAD-dependent DNA ligase 3949875 5749176 Daci_3592 Delftia acidovorans SPH-1 NAD-dependent DNA ligase YP_001564611.1 3947764 D 398578 CDS YP_001564612.1 160899030 5749177 3949875..3950882 1 NC_010002.1 PFAM: Patatin; KEGG: ajs:Ajs_2082 patatin; patatin 3950882 5749177 Daci_3593 Delftia acidovorans SPH-1 patatin YP_001564612.1 3949875 D 398578 CDS YP_001564613.1 160899031 5749178 complement(3950953..3953793) 1 NC_010002.1 PFAM: CheW domain protein; KEGG: mpt:Mpe_A2970 hypothetical protein; CheW protein 3953793 5749178 Daci_3594 Delftia acidovorans SPH-1 CheW protein YP_001564613.1 3950953 R 398578 CDS YP_001564614.1 160899032 5749179 complement(3954057..3954620) 1 NC_010002.1 PFAM: NUDIX hydrolase; KEGG: vei:Veis_3823 NUDIX hydrolase; NUDIX hydrolase 3954620 5749179 Daci_3595 Delftia acidovorans SPH-1 NUDIX hydrolase YP_001564614.1 3954057 R 398578 CDS YP_001564615.1 160899033 5749180 complement(3954768..3955463) 1 NC_010002.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: aav:Aave_2473 fumarylacetoacetate (FAA) hydrolase; fumarylacetoacetate (FAA) hydrolase 3955463 5749180 Daci_3596 Delftia acidovorans SPH-1 fumarylacetoacetate (FAA) hydrolase YP_001564615.1 3954768 R 398578 CDS YP_001564616.1 160899034 5749181 3955597..3956262 1 NC_010002.1 TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase domain; KEGG: ajs:Ajs_2077 maleylacetoacetate isomerase; maleylacetoacetate isomerase 3956262 5749181 Daci_3597 Delftia acidovorans SPH-1 maleylacetoacetate isomerase YP_001564616.1 3955597 D 398578 CDS YP_001564617.1 160899035 5749182 3956259..3957104 1 NC_010002.1 PFAM: protein of unknown function DUF152; KEGG: vei:Veis_3820 protein of unknown function DUF152; hypothetical protein 3957104 5749182 Daci_3598 Delftia acidovorans SPH-1 hypothetical protein YP_001564617.1 3956259 D 398578 CDS YP_001564618.1 160899036 5749183 complement(3957024..3957359) 1 NC_010002.1 KEGG: ajs:Ajs_2075 hypothetical protein; hypothetical protein 3957359 5749183 Daci_3599 Delftia acidovorans SPH-1 hypothetical protein YP_001564618.1 3957024 R 398578 CDS YP_001564619.1 160899037 5749184 3957501..3959396 1 NC_010002.1 TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I; PFAM: alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: aav:Aave_2477 poly(R)-hydroxyalkanoic acid synthase, class I; poly(R)-hydroxyalkanoic acid synthase 3959396 5749184 Daci_3600 Delftia acidovorans SPH-1 poly(R)-hydroxyalkanoic acid synthase YP_001564619.1 3957501 D 398578 CDS YP_001564620.1 160899038 5749185 3959520..3960701 1 NC_010002.1 KEGG: aav:Aave_2478 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase 3960701 5749185 Daci_3601 Delftia acidovorans SPH-1 acetyl-CoA acetyltransferase YP_001564620.1 3959520 D 398578 CDS YP_001564621.1 160899039 5749186 3960914..3961651 1 NC_010002.1 catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 3961651 fabG 5749186 fabG Delftia acidovorans SPH-1 3-ketoacyl-ACP reductase YP_001564621.1 3960914 D 398578 CDS YP_001564622.1 160899040 5749187 complement(3962369..3963343) 1 NC_010002.1 PFAM: peptidase T2 asparaginase 2; KEGG: aav:Aave_1656 peptidase T2, asparaginase 2; peptidase T2 asparaginase 2 3963343 5749187 Daci_3603 Delftia acidovorans SPH-1 peptidase T2 asparaginase 2 YP_001564622.1 3962369 R 398578 CDS YP_001564623.1 160899041 5749188 complement(3963340..3964422) 1 NC_010002.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbr:BB4446 putative amino acid ABC transporter permease protein; polar amino acid ABC transporter inner membrane protein 3964422 5749188 Daci_3604 Delftia acidovorans SPH-1 polar amino acid ABC transporter inner membrane protein YP_001564623.1 3963340 R 398578 CDS YP_001564624.1 160899042 5749189 complement(3964440..3965489) 1 NC_010002.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azo:azo1330 putative amino acid permease; polar amino acid ABC transporter inner membrane protein 3965489 5749189 Daci_3605 Delftia acidovorans SPH-1 polar amino acid ABC transporter inner membrane protein YP_001564624.1 3964440 R 398578 CDS YP_001564625.1 160899043 5749190 complement(3965510..3966547) 1 NC_010002.1 SMART: extracellular solute-binding protein family 3; KEGG: azo:azo1331 putative amino acid-binding protein; extracellular solute-binding protein 3966547 5749190 Daci_3606 Delftia acidovorans SPH-1 extracellular solute-binding protein YP_001564625.1 3965510 R 398578 CDS YP_001564626.1 160899044 5749191 complement(3966544..3967521) 1 NC_010002.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: pmy:Pmen_1089 transcriptional regulator, RpiR family; RpiR family transcriptional regulator 3967521 5749191 Daci_3607 Delftia acidovorans SPH-1 RpiR family transcriptional regulator YP_001564626.1 3966544 R 398578 CDS YP_001564627.1 160899045 5749192 complement(3967749..3969812) 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_2480 ABC transporter-related protein; ABC transporter-like protein 3969812 5749192 Daci_3608 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001564627.1 3967749 R 398578 CDS YP_001564628.1 160899046 5749193 complement(3969907..3970926) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: aav:Aave_0200 uncharacterized protein UPF0065; hypothetical protein 3970926 5749193 Daci_3609 Delftia acidovorans SPH-1 hypothetical protein YP_001564628.1 3969907 R 398578 CDS YP_001564629.1 160899047 5749194 complement(3970968..3972191) 1 NC_010002.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ppu:PP_2039 acyl-CoA dehydrogenase, putative; acyl-CoA dehydrogenase domain-containing protein 3972191 5749194 Daci_3610 Delftia acidovorans SPH-1 acyl-CoA dehydrogenase domain-containing protein YP_001564629.1 3970968 R 398578 CDS YP_001564630.1 160899048 5749195 complement(3972193..3973791) 1 NC_010002.1 PFAM: AMP-dependent synthetase and ligase; KEGG: reu:Reut_B5309 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 3973791 5749195 Daci_3611 Delftia acidovorans SPH-1 AMP-dependent synthetase/ligase YP_001564630.1 3972193 R 398578 CDS YP_001564631.1 160899049 5749196 complement(3973967..3974965) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_6272 transcriptional regulator, LysR family; LysR family transcriptional regulator 3974965 5749196 Daci_3612 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001564631.1 3973967 R 398578 CDS YP_001564632.1 160899050 5749197 complement(3974967..3975944) 1 NC_010002.1 involved in methylation of ribosomal protein L3; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 3975944 5749197 Daci_3613 Delftia acidovorans SPH-1 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase YP_001564632.1 3974967 R 398578 CDS YP_001564633.1 160899051 5749198 complement(3975965..3977125) 1 NC_010002.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 3977125 5749198 Daci_3614 Delftia acidovorans SPH-1 succinyl-diaminopimelate desuccinylase YP_001564633.1 3975965 R 398578 CDS YP_001564634.1 160899052 5749199 complement(3977212..3978381) 1 NC_010002.1 TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: ajs:Ajs_2068 twitching motility protein; twitching motility protein 3978381 5749199 Daci_3615 Delftia acidovorans SPH-1 twitching motility protein YP_001564634.1 3977212 R 398578 CDS YP_001564635.1 160899053 5749200 complement(3978562..3979386) 1 NC_010002.1 catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 3979386 dapD 5749200 dapD Delftia acidovorans SPH-1 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_001564635.1 3978562 R 398578 CDS YP_001564636.1 160899054 5749201 complement(3979438..3980643) 1 NC_010002.1 catalyzes the formation of succinyldiaminopimelate from N-succinyl-2-amino-6-ketopimelate; succinyldiaminopimelate transaminase 3980643 5749201 Daci_3617 Delftia acidovorans SPH-1 succinyldiaminopimelate transaminase YP_001564636.1 3979438 R 398578 CDS YP_001564637.1 160899055 5749202 3980832..3982370 1 NC_010002.1 PFAM: chemotaxis sensory transducer; KEGG: ajs:Ajs_2065 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3982370 5749202 Daci_3618 Delftia acidovorans SPH-1 methyl-accepting chemotaxis sensory transducer YP_001564637.1 3980832 D 398578 CDS YP_001564638.1 160899056 5749203 complement(3982479..3983195) 1 NC_010002.1 TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Fe-S cluster domain protein; KEGG: ajs:Ajs_2064 electron transport complex, RnfABCDGE type, B subunit; RnfABCDGE type electron transport complex subunit B 3983195 5749203 Daci_3619 Delftia acidovorans SPH-1 RnfABCDGE type electron transport complex subunit B YP_001564638.1 3982479 R 398578 CDS YP_001564639.1 160899057 5749204 complement(3983219..3984592) 1 NC_010002.1 TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: aav:Aave_2488 polyhydroxyalkanoate depolymerase, intracellular; polyhydroxyalkanoate depolymerase 3984592 5749204 Daci_3620 Delftia acidovorans SPH-1 polyhydroxyalkanoate depolymerase YP_001564639.1 3983219 R 398578 CDS YP_001564640.1 160899058 5749205 complement(3984761..3985771) 1 NC_010002.1 TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase DuS; KEGG: ajs:Ajs_2060 TIM-barrel protein, YjbN family; tRNA-dihydrouridine synthase A 3985771 5749205 Daci_3621 Delftia acidovorans SPH-1 tRNA-dihydrouridine synthase A YP_001564640.1 3984761 R 398578 CDS YP_001564641.1 160899059 5749206 complement(3986133..3986471) 1 NC_010002.1 KEGG: aav:Aave_3790 transposase, IS4 family protein; transposase, IS4 family protein 3986471 5749206 Daci_3622 Delftia acidovorans SPH-1 transposase, IS4 family protein YP_001564641.1 3986133 R 398578 CDS YP_001564642.1 160899060 5749207 complement(3986531..3986956) 1 NC_010002.1 KEGG: aav:Aave_3789 putative TIS1421-transposase orfA protein; putative TIS1421-transposase orfA protein 3986956 5749207 Daci_3623 Delftia acidovorans SPH-1 putative TIS1421-transposase orfA protein YP_001564642.1 3986531 R 398578 CDS YP_001564643.1 160899061 5749208 complement(3987012..3987191) 1 NC_010002.1 KEGG: mlo:mlr6150 transposase; transposase 3987191 5749208 Daci_3624 Delftia acidovorans SPH-1 transposase YP_001564643.1 3987012 R 398578 CDS YP_001564644.1 160899062 5749209 complement(3987292..3987540) 1 NC_010002.1 KEGG: bch:Bcen2424_3232 integrase, catalytic region; integrase catalytic subunit 3987540 5749209 Daci_3625 Delftia acidovorans SPH-1 integrase catalytic subunit YP_001564644.1 3987292 R 398578 CDS YP_001564645.1 160899063 5749211 complement(3988482..3988748) 1 NC_010002.1 PFAM: transposase IS3/IS911 family protein; KEGG: pna:Pnap_4650 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 3988748 5749211 Daci_3628 Delftia acidovorans SPH-1 transposase IS3/IS911 family protein YP_001564645.1 3988482 R 398578 CDS YP_001564646.1 160899064 5749212 3989255..3990184 1 NC_010002.1 PFAM: acyltransferase 3; KEGG: psp:PSPPH_2622 exopolysaccharide production protein ExoZ, putative; acyltransferase 3 3990184 5749212 Daci_3629 Delftia acidovorans SPH-1 acyltransferase 3 YP_001564646.1 3989255 D 398578 CDS YP_001564647.1 160899065 5749213 3990417..3990842 1 NC_010002.1 KEGG: aav:Aave_3789 putative TIS1421-transposase orfA protein; putative TIS1421-transposase orfA protein 3990842 5749213 Daci_3630 Delftia acidovorans SPH-1 putative TIS1421-transposase orfA protein YP_001564647.1 3990417 D 398578 CDS YP_001564648.1 160899066 5749214 3990902..3991240 1 NC_010002.1 KEGG: aav:Aave_3790 transposase, IS4 family protein; transposase, IS4 family protein 3991240 5749214 Daci_3631 Delftia acidovorans SPH-1 transposase, IS4 family protein YP_001564648.1 3990902 D 398578 CDS YP_001564649.1 160899067 5749215 3991289..3992023 1 NC_010002.1 KEGG: aav:Aave_2383 hypothetical protein; hypothetical protein 3992023 5749215 Daci_3632 Delftia acidovorans SPH-1 hypothetical protein YP_001564649.1 3991289 D 398578 CDS YP_001564650.1 160899068 5749216 3992401..3992745 1 NC_010002.1 KEGG: cvi:CV_1338 hypothetical protein; hypothetical protein 3992745 5749216 Daci_3633 Delftia acidovorans SPH-1 hypothetical protein YP_001564650.1 3992401 D 398578 CDS YP_001564651.1 160899069 5749217 complement(3992735..3992971) 1 NC_010002.1 hypothetical protein 3992971 5749217 Daci_3634 Delftia acidovorans SPH-1 hypothetical protein YP_001564651.1 3992735 R 398578 CDS YP_001564652.1 160899070 5749218 complement(3993087..3993380) 1 NC_010002.1 hypothetical protein 3993380 5749218 Daci_3635 Delftia acidovorans SPH-1 hypothetical protein YP_001564652.1 3993087 R 398578 CDS YP_001564653.1 160899071 5749219 3993550..3994857 1 NC_010002.1 PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: mpt:Mpe_A2450 putative two-component response regulator; response regulator receiver modulated metal dependent phosphohydrolase 3994857 5749219 Daci_3636 Delftia acidovorans SPH-1 response regulator receiver modulated metal dependent phosphohydrolase YP_001564653.1 3993550 D 398578 CDS YP_001564654.1 160899072 5749220 complement(3995482..3996171) 1 NC_010002.1 PFAM: ANTAR domain protein; KEGG: vei:Veis_4901 response regulator receiver and ANTAR domain protein; response regulator receiver/ANTAR domain-containing protein 3996171 5749220 Daci_3637 Delftia acidovorans SPH-1 response regulator receiver/ANTAR domain-containing protein YP_001564654.1 3995482 R 398578 CDS YP_001564655.1 160899073 5749221 complement(3996174..3997322) 1 NC_010002.1 KEGG: vei:Veis_4902 ABC branched chain amino acid family transporter, periplasmic ligand binding protein; branched chain amino acid ABC transporter periplasmic ligand-binding protein 3997322 5749221 Daci_3638 Delftia acidovorans SPH-1 branched chain amino acid ABC transporter periplasmic ligand-binding protein YP_001564655.1 3996174 R 398578 CDS YP_001564656.1 160899074 5749222 complement(3997403..3999139) 1 NC_010002.1 PFAM: von Willebrand factor type A; KEGG: vei:Veis_4903 von Willebrand factor, type A; von Willebrand factor type A 3999139 5749222 Daci_3639 Delftia acidovorans SPH-1 von Willebrand factor type A YP_001564656.1 3997403 R 398578 CDS YP_001564657.1 160899075 5749223 complement(3999152..4000009) 1 NC_010002.1 PFAM: ATPase associated with various cellular activities AAA_5; CbbQ/NirQ/NorQ domain protein; KEGG: vei:Veis_4904 ATPase associated with various cellular activities, AAA_5; ATPase 4000009 5749223 Daci_3640 Delftia acidovorans SPH-1 ATPase YP_001564657.1 3999152 R 398578 CDS YP_001564658.1 160899076 5749224 complement(4000082..4001119) 1 NC_010002.1 aliphatic amidase; catalyzes the hydrolysis of short-chain aliphatic amides to their organic acids and can also transfer the acyl moiety of short-chain amides to hydroxylamine to form hydroxamates; acylamide amidohydrolase 4001119 amiE 5749224 amiE Delftia acidovorans SPH-1 acylamide amidohydrolase YP_001564658.1 4000082 R 398578 CDS YP_001564659.1 160899077 5749225 complement(4001427..4002836) 1 NC_010002.1 PFAM: Gluconate transporter; Citrate transporter; KEGG: pcr:Pcryo_1595 GntP family transporter; citrate transporter 4002836 5749225 Daci_3642 Delftia acidovorans SPH-1 citrate transporter YP_001564659.1 4001427 R 398578 CDS YP_001564660.1 160899078 5749226 complement(4002949..4004283) 1 NC_010002.1 PFAM: cytochrome P450; KEGG: bur:Bcep18194_B1689 cytochrome P450; cytochrome P450 4004283 5749226 Daci_3643 Delftia acidovorans SPH-1 cytochrome P450 YP_001564660.1 4002949 R 398578 CDS YP_001564661.1 160899079 5749227 4004353..4005492 1 NC_010002.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_B1690 transcriptional regulator, AraC family; AraC family transcriptional regulator 4005492 5749227 Daci_3644 Delftia acidovorans SPH-1 AraC family transcriptional regulator YP_001564661.1 4004353 D 398578 CDS YP_001564662.1 160899080 5749228 4005831..4008065 1 NC_010002.1 KEGG: ajs:Ajs_2300 isocitrate dehydrogenase, NADP-dependent; TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate dehydrogenase NADP-dependent monomeric type; NADP-dependent isocitrate dehydrogenase 4008065 5749228 Daci_3645 Delftia acidovorans SPH-1 NADP-dependent isocitrate dehydrogenase YP_001564662.1 4005831 D 398578 CDS YP_001564663.1 160899081 5749229 complement(4008220..4008567) 1 NC_010002.1 PFAM: RNP-1 like RNA-binding protein; KEGG: aav:Aave_2141 RNP-1-like RNA-binding protein; RNP-1 like RNA-binding protein 4008567 5749229 Daci_3646 Delftia acidovorans SPH-1 RNP-1 like RNA-binding protein YP_001564663.1 4008220 R 398578 CDS YP_001564664.1 160899082 5749230 complement(4008677..4008886) 1 NC_010002.1 KEGG: aav:Aave_2142 hypothetical protein; hypothetical protein 4008886 5749230 Daci_3647 Delftia acidovorans SPH-1 hypothetical protein YP_001564664.1 4008677 R 398578 CDS YP_001564665.1 160899083 5749231 4009240..4009641 1 NC_010002.1 KEGG: mes:Meso_4003 putative ferric uptake regulator, Fur family; ferric uptake regulator family protein 4009641 5749231 Daci_3648 Delftia acidovorans SPH-1 ferric uptake regulator family protein YP_001564665.1 4009240 D 398578 CDS YP_001564666.1 160899084 5749232 4009657..4010928 1 NC_010002.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bur:Bcep18194_B0316 cobalamin synthesis protein/P47K; cobalamin synthesis protein P47K 4010928 5749232 Daci_3649 Delftia acidovorans SPH-1 cobalamin synthesis protein P47K YP_001564666.1 4009657 D 398578 CDS YP_001564667.1 160899085 5749233 4011024..4011914 1 NC_010002.1 similar protein in Methanocaldococcus converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate as the first step in methanopterin biosynthesis; putative GTP cyclohydrolase 4011914 5749233 Daci_3650 Delftia acidovorans SPH-1 putative GTP cyclohydrolase YP_001564667.1 4011024 D 398578 CDS YP_001564668.1 160899086 5749234 4011960..4012109 1 NC_010002.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif; 50S ribosomal protein L36 4012109 rpmJ 5749234 rpmJ Delftia acidovorans SPH-1 50S ribosomal protein L36 YP_001564668.1 4011960 D 398578 CDS YP_001564669.1 160899087 5749235 4012106..4012666 1 NC_010002.1 KEGG: bur:Bcep18194_B0319 carbonic anhydrase/acetyltransferase isoleucine patch superfamily; carbonic anhydrase 4012666 5749235 Daci_3652 Delftia acidovorans SPH-1 carbonic anhydrase YP_001564669.1 4012106 D 398578 CDS YP_001564670.1 160899088 5749236 4012684..4013133 1 NC_010002.1 PFAM: ferric-uptake regulator; KEGG: rme:Rmet_2976 ferric uptake regulator, FUR family; ferric uptake regulator family protein 4013133 5749236 Daci_3653 Delftia acidovorans SPH-1 ferric uptake regulator family protein YP_001564670.1 4012684 D 398578 CDS YP_001564671.1 160899089 5749237 complement(4013120..4013905) 1 NC_010002.1 KEGG: mxa:MXAN_1759 hypothetical protein; hypothetical protein 4013905 5749237 Daci_3654 Delftia acidovorans SPH-1 hypothetical protein YP_001564671.1 4013120 R 398578 CDS YP_001564672.1 160899090 5749238 complement(4013902..4014393) 1 NC_010002.1 PFAM: regulatory protein MarR; KEGG: mxa:MXAN_1760 transcriptional regulator, MarR family; MarR family transcriptional regulator 4014393 5749238 Daci_3655 Delftia acidovorans SPH-1 MarR family transcriptional regulator YP_001564672.1 4013902 R 398578 CDS YP_001564673.1 160899091 5749239 complement(4014417..4015949) 1 NC_010002.1 KEGG: vei:Veis_4739 hypothetical protein; hypothetical protein 4015949 5749239 Daci_3656 Delftia acidovorans SPH-1 hypothetical protein YP_001564673.1 4014417 R 398578 CDS YP_001564674.1 160899092 5749240 complement(4015964..4018171) 1 NC_010002.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: vei:Veis_4740 TonB-dependent siderophore receptor; TonB-dependent receptor 4018171 5749240 Daci_3657 Delftia acidovorans SPH-1 TonB-dependent receptor YP_001564674.1 4015964 R 398578 CDS YP_001564675.1 160899093 5749241 complement(4018294..4018665) 1 NC_010002.1 KEGG: aav:Aave_4449 hypothetical protein; hypothetical protein 4018665 5749241 Daci_3658 Delftia acidovorans SPH-1 hypothetical protein YP_001564675.1 4018294 R 398578 CDS YP_001564676.1 160899094 5749242 complement(4018675..4019217) 1 NC_010002.1 PFAM: protein of unknown function DUF192; KEGG: aav:Aave_2570 protein of unknown function DUF192; hypothetical protein 4019217 5749242 Daci_3659 Delftia acidovorans SPH-1 hypothetical protein YP_001564676.1 4018675 R 398578 CDS YP_001564677.1 160899095 5749243 complement(4019361..4019582) 1 NC_010002.1 KEGG: aav:Aave_2571 hypothetical protein; hypothetical protein 4019582 5749243 Daci_3660 Delftia acidovorans SPH-1 hypothetical protein YP_001564677.1 4019361 R 398578 CDS YP_001564678.1 160899096 5749244 4019792..4021054 1 NC_010002.1 Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase 4021054 5749244 Daci_3661 Delftia acidovorans SPH-1 isocitrate dehydrogenase YP_001564678.1 4019792 D 398578 CDS YP_001564679.1 160899097 5749245 complement(4021103..4023496) 1 NC_010002.1 PFAM: Ig family protein; KEGG: rfr:Rfer_1577 protease-like; Ig family protein 4023496 5749245 Daci_3662 Delftia acidovorans SPH-1 Ig family protein YP_001564679.1 4021103 R 398578 CDS YP_001564680.1 160899098 5749246 complement(4023767..4024537) 1 NC_010002.1 KEGG: rso:RSc1444 hypothetical protein; hypothetical protein 4024537 5749246 Daci_3663 Delftia acidovorans SPH-1 hypothetical protein YP_001564680.1 4023767 R 398578 CDS YP_001564681.1 160899099 5749247 4024555..4025253 1 NC_010002.1 KEGG: rfr:Rfer_1207 aspartyl protease-like; aspartyl protease-like protein 4025253 5749247 Daci_3664 Delftia acidovorans SPH-1 aspartyl protease-like protein YP_001564681.1 4024555 D 398578 CDS YP_001564682.1 160899100 5749248 4025290..4026414 1 NC_010002.1 PFAM: beta-lactamase; KEGG: stp:Strop_0635 beta-lactamase; beta-lactamase 4026414 5749248 Daci_3665 Delftia acidovorans SPH-1 beta-lactamase YP_001564682.1 4025290 D 398578 CDS YP_001564683.1 160899101 5749249 4026649..4027719 1 NC_010002.1 catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA; tRNA 2-selenouridine synthase 4027719 5749249 Daci_3666 Delftia acidovorans SPH-1 tRNA 2-selenouridine synthase YP_001564683.1 4026649 D 398578 CDS YP_001564684.1 160899102 5749250 complement(4027747..4028382) 1 NC_010002.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bbr:BB4264 hypothetical protein; lysine exporter protein LysE/YggA 4028382 5749250 Daci_3667 Delftia acidovorans SPH-1 lysine exporter protein LysE/YggA YP_001564684.1 4027747 R 398578 CDS YP_001564685.1 160899103 5749251 4028509..4030038 1 NC_010002.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bbr:BB4262 putative GntR-family transcriptional regulator; transcriptional regulator 4030038 5749251 Daci_3668 Delftia acidovorans SPH-1 transcriptional regulator YP_001564685.1 4028509 D 398578 CDS YP_001564686.1 160899104 5749252 4030151..4030948 1 NC_010002.1 KEGG: pol:Bpro_4259 putative lipoprotein; putative lipoprotein 4030948 5749252 Daci_3669 Delftia acidovorans SPH-1 putative lipoprotein YP_001564686.1 4030151 D 398578 CDS YP_001564687.1 160899105 5749253 complement(4030994..4031329) 1 NC_010002.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: rfr:Rfer_1707 cupin 2 protein; cupin 4031329 5749253 Daci_3670 Delftia acidovorans SPH-1 cupin YP_001564687.1 4030994 R 398578 CDS YP_001564688.1 160899106 5749254 complement(4031430..4031882) 1 NC_010002.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: tbd:Tbd_0651 hypothetical protein; activator of Hsp90 ATPase 1 family protein 4031882 5749254 Daci_3671 Delftia acidovorans SPH-1 activator of Hsp90 ATPase 1 family protein YP_001564688.1 4031430 R 398578 CDS YP_001564689.1 160899107 5749255 4032104..4033087 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: vei:Veis_1198 uncharacterized protein UPF0065; hypothetical protein 4033087 5749255 Daci_3672 Delftia acidovorans SPH-1 hypothetical protein YP_001564689.1 4032104 D 398578 CDS YP_001564690.1 160899108 5749256 4033099..4034520 1 NC_010002.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: aav:Aave_0178 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 4034520 5749256 Daci_3673 Delftia acidovorans SPH-1 L-carnitine dehydratase/bile acid-inducible protein F YP_001564690.1 4033099 D 398578 CDS YP_001564691.1 160899109 5749257 4034505..4034900 1 NC_010002.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: aav:Aave_0177 cupin 2, conserved barrel domain protein; cupin 4034900 5749257 Daci_3674 Delftia acidovorans SPH-1 cupin YP_001564691.1 4034505 D 398578 CDS YP_001564692.1 160899110 5749258 4034958..4036121 1 NC_010002.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: aav:Aave_0176 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 4036121 5749258 Daci_3675 Delftia acidovorans SPH-1 acyl-CoA dehydrogenase domain-containing protein YP_001564692.1 4034958 D 398578 CDS YP_001564693.1 160899111 5749259 4036289..4037242 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_0175 transcriptional regulator, LysR family; LysR family transcriptional regulator 4037242 5749259 Daci_3676 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001564693.1 4036289 D 398578 CDS YP_001564694.1 160899112 5749260 complement(4037223..4037543) 1 NC_010002.1 hypothetical protein 4037543 5749260 Daci_3677 Delftia acidovorans SPH-1 hypothetical protein YP_001564694.1 4037223 R 398578 CDS YP_001564695.1 160899113 5749261 complement(4037740..4038471) 1 NC_010002.1 hypothetical protein 4038471 5749261 Daci_3678 Delftia acidovorans SPH-1 hypothetical protein YP_001564695.1 4037740 R 398578 CDS YP_001564696.1 160899114 5749262 complement(4038892..4041831) 1 NC_010002.1 KEGG: nha:Nham_0235 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor hybrid histidine kinase 4041831 5749262 Daci_3679 Delftia acidovorans SPH-1 PAS/PAC sensor hybrid histidine kinase YP_001564696.1 4038892 R 398578 CDS YP_001564697.1 160899115 5749263 4041985..4043085 1 NC_010002.1 KEGG: vei:Veis_4644 porin, gram-negative type; porin 4043085 5749263 Daci_3680 Delftia acidovorans SPH-1 porin YP_001564697.1 4041985 D 398578 CDS YP_001564698.1 160899116 5749264 4043207..4044787 1 NC_010002.1 KEGG: esa:ESA_01915 hypothetical protein; hypothetical protein 4044787 5749264 Daci_3681 Delftia acidovorans SPH-1 hypothetical protein YP_001564698.1 4043207 D 398578 CDS YP_001564699.1 160899117 5749265 4045257..4047062 1 NC_010002.1 PFAM: NERD domain protein; KEGG: aav:Aave_4619 hypothetical protein; NERD domain-containing protein 4047062 5749265 Daci_3682 Delftia acidovorans SPH-1 NERD domain-containing protein YP_001564699.1 4045257 D 398578 CDS YP_001564700.1 160899118 5749266 complement(4047179..4047637) 1 NC_010002.1 KEGG: bbr:BB1251 hypothetical protein; hypothetical protein 4047637 5749266 Daci_3683 Delftia acidovorans SPH-1 hypothetical protein YP_001564700.1 4047179 R 398578 CDS YP_001564701.1 160899119 5749267 complement(4048972..4050216) 1 NC_010002.1 KEGG: swi:Swit_3482 hypothetical protein; hypothetical protein 4050216 5749267 Daci_3684 Delftia acidovorans SPH-1 hypothetical protein YP_001564701.1 4048972 R 398578 CDS YP_001564702.1 160899120 5749268 complement(4050648..4050968) 1 NC_010002.1 KEGG: pca:Pcar_0535 hypothetical protein; hypothetical protein 4050968 5749268 Daci_3685 Delftia acidovorans SPH-1 hypothetical protein YP_001564702.1 4050648 R 398578 CDS YP_001564703.1 160899121 5749269 4052136..4052513 1 NC_010002.1 hypothetical protein 4052513 5749269 Daci_3686 Delftia acidovorans SPH-1 hypothetical protein YP_001564703.1 4052136 D 398578 CDS YP_001564704.1 160899122 5749270 complement(4052623..4053168) 1 NC_010002.1 PFAM: Propeptide PepSY amd peptidase M4; KEGG: prw:PsycPRwf_1922 propeptide, PepSY amd peptidase M4; peptidase 4053168 5749270 Daci_3687 Delftia acidovorans SPH-1 peptidase YP_001564704.1 4052623 R 398578 CDS YP_001564705.1 160899123 5749271 complement(4053311..4054513) 1 NC_010002.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 4054513 5749271 Daci_3688 Delftia acidovorans SPH-1 tryptophan synthase subunit beta YP_001564705.1 4053311 R 398578 CDS YP_001564706.1 160899124 5749272 complement(4054556..4056409) 1 NC_010002.1 hypothetical protein 4056409 5749272 Daci_3689 Delftia acidovorans SPH-1 hypothetical protein YP_001564706.1 4054556 R 398578 CDS YP_001564707.1 160899125 5749273 complement(4056518..4057411) 1 NC_010002.1 KEGG: ajs:Ajs_2005 3-hydroxyisobutyrate dehydrogenase; TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: TrkA-N domain protein; NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; 3-hydroxyisobutyrate dehydrogenase 4057411 5749273 Daci_3690 Delftia acidovorans SPH-1 3-hydroxyisobutyrate dehydrogenase YP_001564707.1 4056518 R 398578 CDS YP_001564708.1 160899126 5749274 complement(4057449..4057898) 1 NC_010002.1 KEGG: reh:H16_A3515 hypothetical protein; hypothetical protein 4057898 5749274 Daci_3691 Delftia acidovorans SPH-1 hypothetical protein YP_001564708.1 4057449 R 398578 CDS YP_001564709.1 160899127 5749275 complement(4057920..4058384) 1 NC_010002.1 KEGG: ajs:Ajs_2006 hypothetical protein; hypothetical protein 4058384 5749275 Daci_3692 Delftia acidovorans SPH-1 hypothetical protein YP_001564709.1 4057920 R 398578 CDS YP_001564710.1 160899128 5749276 complement(4058408..4059574) 1 NC_010002.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_2007 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 4059574 5749276 Daci_3693 Delftia acidovorans SPH-1 acyl-CoA dehydrogenase domain-containing protein YP_001564710.1 4058408 R 398578 CDS YP_001564711.1 160899129 5749277 complement(4059655..4060056) 1 NC_010002.1 PFAM: protein of unknown function DUF1311; KEGG: aav:Aave_2603 hypothetical protein; hypothetical protein 4060056 5749277 Daci_3694 Delftia acidovorans SPH-1 hypothetical protein YP_001564711.1 4059655 R 398578 CDS YP_001564712.1 160899130 5749278 complement(4060118..4061641) 1 NC_010002.1 TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: ajs:Ajs_2009 methylmalonate-semialdehyde dehydrogenase; methylmalonate-semialdehyde dehydrogenase 4061641 5749278 Daci_3695 Delftia acidovorans SPH-1 methylmalonate-semialdehyde dehydrogenase YP_001564712.1 4060118 R 398578 CDS YP_001564713.1 160899131 5749279 complement(4061925..4062380) 1 NC_010002.1 PFAM: regulatory protein MarR; KEGG: pol:Bpro_2197 transcriptional regulator, MarR family; MarR family transcriptional regulator 4062380 5749279 Daci_3696 Delftia acidovorans SPH-1 MarR family transcriptional regulator YP_001564713.1 4061925 R 398578 CDS YP_001564714.1 160899132 5749280 4062470..4063474 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: pol:Bpro_2198 uncharacterized protein UPF0065; hypothetical protein 4063474 5749280 Daci_3697 Delftia acidovorans SPH-1 hypothetical protein YP_001564714.1 4062470 D 398578 CDS YP_001564715.1 160899133 5749281 4063510..4064763 1 NC_010002.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: pol:Bpro_2199 monooxygenase, FAD-binding; hypothetical protein 4064763 5749281 Daci_3698 Delftia acidovorans SPH-1 hypothetical protein YP_001564715.1 4063510 D 398578 CDS YP_001564716.1 160899134 5749282 complement(4064778..4065815) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: pna:Pnap_3148 uncharacterized protein UPF0065; hypothetical protein 4065815 5749282 Daci_3699 Delftia acidovorans SPH-1 hypothetical protein YP_001564716.1 4064778 R 398578 CDS YP_001564717.1 160899135 5749283 complement(4065932..4066573) 1 NC_010002.1 TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase domain; KEGG: pna:Pnap_3147 maleylacetoacetate isomerase; maleylacetoacetate isomerase 4066573 5749283 Daci_3700 Delftia acidovorans SPH-1 maleylacetoacetate isomerase YP_001564717.1 4065932 R 398578 CDS YP_001564718.1 160899136 5749284 complement(4066593..4067342) 1 NC_010002.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: pna:Pnap_3146 fumarylacetoacetate (FAA) hydrolase; fumarylacetoacetate (FAA) hydrolase 4067342 5749284 Daci_3701 Delftia acidovorans SPH-1 fumarylacetoacetate (FAA) hydrolase YP_001564718.1 4066593 R 398578 CDS YP_001564719.1 160899137 5749285 complement(4067339..4068376) 1 NC_010002.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: pna:Pnap_3145 cupin 2, conserved barrel domain protein; cupin 4068376 5749285 Daci_3702 Delftia acidovorans SPH-1 cupin YP_001564719.1 4067339 R 398578 CDS YP_001564720.1 160899138 5749286 complement(4068393..4069601) 1 NC_010002.1 catalyzes the formation of catechol from salicylate; salicylate hydroxylase 4069601 5749286 Daci_3703 Delftia acidovorans SPH-1 salicylate hydroxylase YP_001564720.1 4068393 R 398578 CDS YP_001564721.1 160899139 5749287 4069806..4070342 1 NC_010002.1 PFAM: regulatory protein MarR; KEGG: pna:Pnap_3143 transcriptional regulator, MarR family; MarR family transcriptional regulator 4070342 5749287 Daci_3704 Delftia acidovorans SPH-1 MarR family transcriptional regulator YP_001564721.1 4069806 D 398578 CDS YP_001564722.1 160899140 5749288 4070357..4071259 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_2010 transcriptional regulator, LysR family; LysR family transcriptional regulator 4071259 5749288 Daci_3705 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001564722.1 4070357 D 398578 CDS YP_001564723.1 160899141 5749289 4071335..4072381 1 NC_010002.1 PFAM: Patatin; KEGG: aav:Aave_2086 patatin; patatin 4072381 5749289 Daci_3706 Delftia acidovorans SPH-1 patatin YP_001564723.1 4071335 D 398578 CDS YP_001564724.1 160899142 5749290 complement(4072403..4073677) 1 NC_010002.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 4073677 glyA 5749290 glyA Delftia acidovorans SPH-1 serine hydroxymethyltransferase YP_001564724.1 4072403 R 398578 CDS YP_001564725.1 160899143 5749291 complement(4073724..4074962) 1 NC_010002.1 TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: mca:MCA2079 acetylornithine aminotransferase; acetylornithine and succinylornithine aminotransferase 4074962 5749291 Daci_3708 Delftia acidovorans SPH-1 acetylornithine and succinylornithine aminotransferase YP_001564725.1 4073724 R 398578 CDS YP_001564726.1 160899144 5749292 complement(4075021..4075872) 1 NC_010002.1 PFAM: alanine racemase domain protein; KEGG: eca:ECA4047 putative alanine racemase; alanine racemase domain-containing protein 4075872 5749292 Daci_3709 Delftia acidovorans SPH-1 alanine racemase domain-containing protein YP_001564726.1 4075021 R 398578 CDS YP_001564727.1 160899145 5749293 complement(4075877..4077133) 1 NC_010002.1 TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; Xanthine/uracil/vitamin C permease; KEGG: mms:mma_2006 benzoate transport protein; benzoate transporter 4077133 5749293 Daci_3710 Delftia acidovorans SPH-1 benzoate transporter YP_001564727.1 4075877 R 398578 CDS YP_001564728.1 160899146 5749294 4077325..4078839 1 NC_010002.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bbr:BB0707 probable GntR-family transcriptional regulator; transcriptional regulator 4078839 5749294 Daci_3711 Delftia acidovorans SPH-1 transcriptional regulator YP_001564728.1 4077325 D 398578 CDS YP_001564729.1 160899147 5749295 complement(4078870..4080150) 1 NC_010002.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 4080150 5749295 Daci_3712 Delftia acidovorans SPH-1 serine hydroxymethyltransferase YP_001564729.1 4078870 R 398578 CDS YP_001564730.1 160899148 5749296 4080645..4081607 1 NC_010002.1 KEGG: mxa:MXAN_1292 hypothetical protein; hypothetical protein 4081607 5749296 Daci_3713 Delftia acidovorans SPH-1 hypothetical protein YP_001564730.1 4080645 D 398578 CDS YP_001564731.1 160899149 5749297 4081604..4082683 1 NC_010002.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: ppr:PBPRB0302 conserved hypothetical protein; ferredoxin 4082683 5749297 Daci_3714 Delftia acidovorans SPH-1 ferredoxin YP_001564731.1 4081604 D 398578 CDS YP_001564732.1 160899150 5749298 4082735..4083439 1 NC_010002.1 Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group; glutamine amidotransferase 4083439 5749298 Daci_3715 Delftia acidovorans SPH-1 glutamine amidotransferase YP_001564732.1 4082735 D 398578 CDS YP_001564733.1 160899151 5749299 4083534..4083902 1 NC_010002.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: mms:mma_1686 hypothetical protein; antibiotic biosynthesis monooxygenase 4083902 5749299 Daci_3716 Delftia acidovorans SPH-1 antibiotic biosynthesis monooxygenase YP_001564733.1 4083534 D 398578 CDS YP_001564734.1 160899152 5749300 complement(4084116..4084526) 1 NC_010002.1 PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: aav:Aave_2580 histone family protein nucleoid-structuring protein H-NS; histone family protein nucleoid-structuring protein H-NS 4084526 5749300 Daci_3717 Delftia acidovorans SPH-1 histone family protein nucleoid-structuring protein H-NS YP_001564734.1 4084116 R 398578 CDS YP_001564735.1 160899153 5749301 complement(4084523..4084867) 1 NC_010002.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: cbe:Cbei_3719 maltose O-acetyltransferase; hexapaptide repeat-containing transferase 4084867 5749301 Daci_3718 Delftia acidovorans SPH-1 hexapaptide repeat-containing transferase YP_001564735.1 4084523 R 398578 CDS YP_001564736.1 160899154 5749302 4085818..4086285 1 NC_010002.1 hypothetical protein 4086285 5749302 Daci_3719 Delftia acidovorans SPH-1 hypothetical protein YP_001564736.1 4085818 D 398578 CDS YP_001564737.1 160899155 5749303 4086686..4090591 1 NC_010002.1 TIGRFAM: YD repeat protein; KEGG: xac:XAC3245 RhsD protein; YD repeat-containing protein 4090591 5749303 Daci_3720 Delftia acidovorans SPH-1 YD repeat-containing protein YP_001564737.1 4086686 D 398578 CDS YP_001564738.1 160899156 5749304 4091362..4091601 1 NC_010002.1 hypothetical protein 4091601 5749304 Daci_3721 Delftia acidovorans SPH-1 hypothetical protein YP_001564738.1 4091362 D 398578 CDS YP_001564739.1 160899157 5749305 complement(4091644..4091982) 1 NC_010002.1 KEGG: aav:Aave_3790 transposase, IS4 family protein; transposase, IS4 family protein 4091982 5749305 Daci_3722 Delftia acidovorans SPH-1 transposase, IS4 family protein YP_001564739.1 4091644 R 398578 CDS YP_001564740.1 160899158 5749306 complement(4092042..4092467) 1 NC_010002.1 KEGG: aav:Aave_3789 putative TIS1421-transposase orfA protein; putative TIS1421-transposase orfA protein 4092467 5749306 Daci_3723 Delftia acidovorans SPH-1 putative TIS1421-transposase orfA protein YP_001564740.1 4092042 R 398578 CDS YP_001564741.1 160899159 5749307 4092587..4093444 1 NC_010002.1 KEGG: pau:PA14_20520 hypothetical protein; Rhs family protein-like protein 4093444 5749307 Daci_3724 Delftia acidovorans SPH-1 Rhs family protein-like protein YP_001564741.1 4092587 D 398578 CDS YP_001564742.1 160899160 5749308 4093579..4093908 1 NC_010002.1 hypothetical protein 4093908 5749308 Daci_3725 Delftia acidovorans SPH-1 hypothetical protein YP_001564742.1 4093579 D 398578 CDS YP_001564743.1 160899161 5749309 4094148..4094816 1 NC_010002.1 KEGG: sdn:Sden_2437 YD repeat; hypothetical protein 4094816 5749309 Daci_3726 Delftia acidovorans SPH-1 hypothetical protein YP_001564743.1 4094148 D 398578 CDS YP_001564744.1 160899162 5749310 4095126..4095689 1 NC_010002.1 KEGG: sdn:Sden_2437 YD repeat; hypothetical protein 4095689 5749310 Daci_3727 Delftia acidovorans SPH-1 hypothetical protein YP_001564744.1 4095126 D 398578 CDS YP_001564745.1 160899163 5749311 4096385..4096705 1 NC_010002.1 PFAM: protein of unknown function DUF74; KEGG: gsu:GSU2791 hypothetical protein; hypothetical protein 4096705 5749311 Daci_3728 Delftia acidovorans SPH-1 hypothetical protein YP_001564745.1 4096385 D 398578 CDS YP_001564746.1 160899164 5749312 complement(4096755..4097693) 1 NC_010002.1 PFAM: periplasmic binding protein; KEGG: ajs:Ajs_1099 periplasmic binding protein; periplasmic-binding protein 4097693 5749312 Daci_3729 Delftia acidovorans SPH-1 periplasmic-binding protein YP_001564746.1 4096755 R 398578 CDS YP_001564747.1 160899165 5749313 complement(4097699..4099612) 1 NC_010002.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pna:Pnap_2368 TonB-dependent receptor, plug; TonB-dependent receptor 4099612 5749313 Daci_3730 Delftia acidovorans SPH-1 TonB-dependent receptor YP_001564747.1 4097699 R 398578 CDS YP_001564748.1 160899166 5749314 4100005..4100394 1 NC_010002.1 KEGG: pfl:PFL_4030 hypothetical protein; hypothetical protein 4100394 5749314 Daci_3731 Delftia acidovorans SPH-1 hypothetical protein YP_001564748.1 4100005 D 398578 CDS YP_001564749.1 160899167 5749315 4100506..4100697 1 NC_010002.1 PFAM: helix-turn-helix domain protein; KEGG: pau:PA14_11150 putative transcriptional regulator; XRE family transcriptional regulator 4100697 5749315 Daci_3732 Delftia acidovorans SPH-1 XRE family transcriptional regulator YP_001564749.1 4100506 D 398578 CDS YP_001564750.1 160899168 5749316 complement(4100707..4101540) 1 NC_010002.1 PFAM: protein of unknown function DUF81; KEGG: pfl:PFL_4527 hypothetical protein; hypothetical protein 4101540 5749316 Daci_3733 Delftia acidovorans SPH-1 hypothetical protein YP_001564750.1 4100707 R 398578 CDS YP_001564751.1 160899169 5749317 4101642..4102409 1 NC_010002.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pap:PSPA7_4726 probable transcriptional regulator; AraC family transcriptional regulator 4102409 5749317 Daci_3734 Delftia acidovorans SPH-1 AraC family transcriptional regulator YP_001564751.1 4101642 D 398578 CDS YP_001564752.1 160899170 5749318 complement(4102406..4103617) 1 NC_010002.1 PFAM: major facilitator superfamily MFS_1; KEGG: bbr:BB2331 hypothetical protein; major facilitator transporter 4103617 5749318 Daci_3735 Delftia acidovorans SPH-1 major facilitator transporter YP_001564752.1 4102406 R 398578 CDS YP_001564753.1 160899171 5749319 4103736..4104143 1 NC_010002.1 PFAM: helix-turn-helix HxlR type; KEGG: bbr:BB2332 putative transcriptional regulator; HxlR family transcriptional regulator 4104143 5749319 Daci_3736 Delftia acidovorans SPH-1 HxlR family transcriptional regulator YP_001564753.1 4103736 D 398578 CDS YP_001564754.1 160899172 5749320 4104153..4104638 1 NC_010002.1 KEGG: mpt:Mpe_A0377 rod shape-determining-related protein; rod shape-determining-like protein 4104638 5749320 Daci_3737 Delftia acidovorans SPH-1 rod shape-determining-like protein YP_001564754.1 4104153 D 398578 CDS YP_001564755.1 160899173 5749321 complement(4104734..4106731) 1 NC_010002.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pfl:PFL_5169 iron-regulated outer membrane virulence protein; TonB-dependent receptor 4106731 5749321 Daci_3738 Delftia acidovorans SPH-1 TonB-dependent receptor YP_001564755.1 4104734 R 398578 CDS YP_001564756.1 160899174 5749322 complement(4107092..4108540) 1 NC_010002.1 involved in the transport across the cytoplasmic membrane of D-alanine, D-serine and glycine; D-alanine/D-serine/glycine permease 4108540 5749322 Daci_3739 Delftia acidovorans SPH-1 D-alanine/D-serine/glycine permease YP_001564756.1 4107092 R 398578 CDS YP_001564757.1 160899175 5749323 complement(4108817..4109227) 1 NC_010002.1 KEGG: aav:Aave_3004 hypothetical protein; hypothetical protein 4109227 5749323 Daci_3740 Delftia acidovorans SPH-1 hypothetical protein YP_001564757.1 4108817 R 398578 CDS YP_001564758.1 160899176 5749324 complement(4109310..4110401) 1 NC_010002.1 KEGG: bxe:Bxe_B2649 hypothetical protein; hypothetical protein 4110401 5749324 Daci_3741 Delftia acidovorans SPH-1 hypothetical protein YP_001564758.1 4109310 R 398578 CDS YP_001564759.1 160899177 5749325 complement(4110570..4112204) 1 NC_010002.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: eba:ebA3448 probable multidrug resistance B (translocase) transmembrane protein; EmrB/QacA family drug resistance transporter 4112204 5749325 Daci_3742 Delftia acidovorans SPH-1 EmrB/QacA family drug resistance transporter YP_001564759.1 4110570 R 398578 CDS YP_001564760.1 160899178 5749326 complement(4112250..4113611) 1 NC_010002.1 PFAM: secretion protein HlyD family protein; KEGG: eba:ebA3446 putative multidrug resistance protein; secretion protein HlyD family protein 4113611 5749326 Daci_3743 Delftia acidovorans SPH-1 secretion protein HlyD family protein YP_001564760.1 4112250 R 398578 CDS YP_001564761.1 160899179 5749327 complement(4113744..4115219) 1 NC_010002.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: eba:ebA3445 putative outer membrane protein; RND efflux system outer membrane lipoprotein 4115219 5749327 Daci_3744 Delftia acidovorans SPH-1 RND efflux system outer membrane lipoprotein YP_001564761.1 4113744 R 398578 CDS YP_001564762.1 160899180 5749328 complement(4115290..4115826) 1 NC_010002.1 PFAM: regulatory protein MarR; KEGG: rfr:Rfer_1513 transcriptional regulator, MarR family; MarR family transcriptional regulator 4115826 5749328 Daci_3745 Delftia acidovorans SPH-1 MarR family transcriptional regulator YP_001564762.1 4115290 R 398578 CDS YP_001564763.1 160899181 5749329 complement(4115991..4116305) 1 NC_010002.1 KEGG: reh:H16_A1823 hypothetical protein; hypothetical protein 4116305 5749329 Daci_3746 Delftia acidovorans SPH-1 hypothetical protein YP_001564763.1 4115991 R 398578 CDS YP_001564764.1 160899182 5749330 4116626..4117363 1 NC_010002.1 PFAM: AzlC family protein; KEGG: bte:BTH_I0320 brancheD-chain amino acid transport protein AzlC; AzlC family protein 4117363 5749330 Daci_3747 Delftia acidovorans SPH-1 AzlC family protein YP_001564764.1 4116626 D 398578 CDS YP_001564765.1 160899183 5749331 4117367..4117663 1 NC_010002.1 PFAM: branched-chain amino acid transport; KEGG: bte:BTH_I0321 domain of unknown function (DUF931) superfamily; branched-chain amino acid transport 4117663 5749331 Daci_3748 Delftia acidovorans SPH-1 branched-chain amino acid transport YP_001564765.1 4117367 D 398578 CDS YP_001564766.1 160899184 5749332 4117727..4118071 1 NC_010002.1 KEGG: eca:ECA2237 hypothetical protein; hypothetical protein 4118071 5749332 Daci_3749 Delftia acidovorans SPH-1 hypothetical protein YP_001564766.1 4117727 D 398578 CDS YP_001564767.1 160899185 5749333 4118353..4119954 1 NC_010002.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: tbd:Tbd_1622 chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 4119954 5749333 Daci_3750 Delftia acidovorans SPH-1 methyl-accepting chemotaxis sensory transducer YP_001564767.1 4118353 D 398578 CDS YP_001564768.1 160899186 5749334 complement(4120094..4122037) 1 NC_010002.1 PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_2038 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 4122037 5749334 Daci_3751 Delftia acidovorans SPH-1 AMP-dependent synthetase/ligase YP_001564768.1 4120094 R 398578 CDS YP_001564769.1 160899187 5749335 complement(4122314..4122949) 1 NC_010002.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: ajs:Ajs_2039 transcriptional regulator, GntR family; GntR family transcriptional regulator 4122949 5749335 Daci_3752 Delftia acidovorans SPH-1 GntR family transcriptional regulator YP_001564769.1 4122314 R 398578 CDS YP_001564770.1 160899188 5749336 4123025..4125241 1 NC_010002.1 MDM; functions in conversion of succinate to propionate; methylmalonyl-CoA mutase 4125241 5749336 Daci_3753 Delftia acidovorans SPH-1 methylmalonyl-CoA mutase YP_001564770.1 4123025 D 398578 CDS YP_001564771.1 160899189 5749337 4125204..4126325 1 NC_010002.1 functions in transport of arginine/ornithine; inner membrane ATPase that cleaves ATP and phosphorylates two periplasmic proteins that function as two distinct transport systems, the AO (arginine and ornithine) and LAO (lysine, arginine, and ornithine) periplasmic binding proteins; arginine/ornithine transport system ATPase 4126325 5749337 Daci_3754 Delftia acidovorans SPH-1 arginine/ornithine transport system ATPase YP_001564771.1 4125204 D 398578 CDS YP_001564772.1 160899190 5749338 4126382..4127914 1 NC_010002.1 PFAM: carboxyl transferase; KEGG: ajs:Ajs_2042 carboxyl transferase; carboxyl transferase 4127914 5749338 Daci_3755 Delftia acidovorans SPH-1 carboxyl transferase YP_001564772.1 4126382 D 398578 CDS YP_001564773.1 160899191 5749339 4128126..4130174 1 NC_010002.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: biotin/lipoyl attachment domain-containing protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: ajs:Ajs_2043 carbamoyl-phosphate synthase L chain, ATP-binding; acetyl-CoA carboxylase, biotin carboxylase 4130174 5749339 Daci_3756 Delftia acidovorans SPH-1 acetyl-CoA carboxylase, biotin carboxylase YP_001564773.1 4128126 D 398578 CDS YP_001564774.1 160899192 5749340 complement(4130208..4130615) 1 NC_010002.1 PFAM: PilT protein domain protein; KEGG: pde:Pden_0483 PilT protein domain protein; PilT domain-containing protein 4130615 5749340 Daci_3757 Delftia acidovorans SPH-1 PilT domain-containing protein YP_001564774.1 4130208 R 398578 CDS YP_001564775.1 160899193 5749341 complement(4130615..4130881) 1 NC_010002.1 KEGG: rpd:RPD_2062 SpoVT/AbrB-like; SpoVT/AbrB-like protein 4130881 5749341 Daci_3758 Delftia acidovorans SPH-1 SpoVT/AbrB-like protein YP_001564775.1 4130615 R 398578 CDS YP_001564776.1 160899194 5749342 4131121..4132092 1 NC_010002.1 PFAM: response regulator receiver; CheW domain protein; KEGG: vei:Veis_1763 putative CheW protein; response regulator receiver modulated CheW protein 4132092 5749342 Daci_3759 Delftia acidovorans SPH-1 response regulator receiver modulated CheW protein YP_001564776.1 4131121 D 398578 CDS YP_001564777.1 160899195 5749343 complement(4132129..4133223) 1 NC_010002.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: aav:Aave_2798 transcriptional regulator, LacI family; LacI family transcriptional regulator 4133223 5749343 Daci_3760 Delftia acidovorans SPH-1 LacI family transcriptional regulator YP_001564777.1 4132129 R 398578 CDS YP_001564778.1 160899196 5749344 4133380..4133967 1 NC_010002.1 TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase; KEGG: ajs:Ajs_2053 carbohydrate kinase, thermoresistant glucokinase family; carbohydrate kinase 4133967 5749344 Daci_3761 Delftia acidovorans SPH-1 carbohydrate kinase YP_001564778.1 4133380 D 398578 CDS YP_001564779.1 160899197 5749345 4133986..4134492 1 NC_010002.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: aav:Aave_2796 tripartite ATP-independent periplasmic transporter, DctQ component; tripartite ATP-independent periplasmic transporter DctQ 4134492 5749345 Daci_3762 Delftia acidovorans SPH-1 tripartite ATP-independent periplasmic transporter DctQ YP_001564779.1 4133986 D 398578 CDS YP_001564780.1 160899198 5749346 4134505..4135785 1 NC_010002.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: ajs:Ajs_2051 TRAP dicarboxylate transporter, DctM subunit; TRAP dicarboxylate transporter subunit DctM 4135785 5749346 Daci_3763 Delftia acidovorans SPH-1 TRAP dicarboxylate transporter subunit DctM YP_001564780.1 4134505 D 398578 CDS YP_001564781.1 160899199 5749347 4135814..4136833 1 NC_010002.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: ajs:Ajs_2050 TRAP dicarboxylate transporter, DctP subunit; TRAP dicarboxylate transporter subunit DctP 4136833 5749347 Daci_3764 Delftia acidovorans SPH-1 TRAP dicarboxylate transporter subunit DctP YP_001564781.1 4135814 D 398578 CDS YP_001564782.1 160899200 5749348 4136944..4138770 1 NC_010002.1 catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase 4138770 5749348 Daci_3765 Delftia acidovorans SPH-1 phosphogluconate dehydratase YP_001564782.1 4136944 D 398578 CDS YP_001564783.1 160899201 5749349 4138755..4139393 1 NC_010002.1 KEGG: aav:Aave_2792 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; 2-dehydro-3-deoxyphosphogluconate aldolase 4139393 5749349 Daci_3766 Delftia acidovorans SPH-1 2-dehydro-3-deoxyphosphogluconate aldolase YP_001564783.1 4138755 D 398578 CDS YP_001564784.1 160899202 5749350 4140009..4141643 1 NC_010002.1 PFAM: chemotaxis sensory transducer; KEGG: har:HEAR3262 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 4141643 5749350 Daci_3767 Delftia acidovorans SPH-1 methyl-accepting chemotaxis sensory transducer YP_001564784.1 4140009 D 398578 CDS YP_001564785.1 160899203 5749351 4141755..4144052 1 NC_010002.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: bja:bll5864 hypothetical protein; diguanylate cyclase/phosphodiesterase 4144052 5749351 Daci_3768 Delftia acidovorans SPH-1 diguanylate cyclase/phosphodiesterase YP_001564785.1 4141755 D 398578 CDS YP_001564786.1 160899204 5749352 4144123..4145022 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reu:Reut_A2910 regulatory protein, LysR:LysR, substrate-binding; LysR family transcriptional regulator 4145022 5749352 Daci_3769 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001564786.1 4144123 D 398578 CDS YP_001564787.1 160899205 5749353 4145131..4146114 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: pol:Bpro_2752 uncharacterized protein UPF0065; hypothetical protein 4146114 5749353 Daci_3770 Delftia acidovorans SPH-1 hypothetical protein YP_001564787.1 4145131 D 398578 CDS YP_001564788.1 160899206 5749354 4146124..4147311 1 NC_010002.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: reu:Reut_A2908 L-carnitine dehydratase/bile acid-inducible protein F; formyl-CoA transferase 4147311 5749354 Daci_3771 Delftia acidovorans SPH-1 formyl-CoA transferase YP_001564788.1 4146124 D 398578 CDS YP_001564789.1 160899207 5749355 4147308..4148072 1 NC_010002.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: reu:Reut_A2907 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 4148072 5749355 Daci_3772 Delftia acidovorans SPH-1 enoyl-CoA hydratase/isomerase YP_001564789.1 4147308 D 398578 CDS YP_001564790.1 160899208 5749356 complement(4148115..4149542) 1 NC_010002.1 TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: aav:Aave_4255 TonB family protein; TonB family protein 4149542 5749356 Daci_3773 Delftia acidovorans SPH-1 TonB family protein YP_001564790.1 4148115 R 398578 CDS YP_001564791.1 160899209 5749357 complement(4149562..4151280) 1 NC_010002.1 PFAM: Heat shock protein 70; KEGG: aav:Aave_4256 heat shock protein 70; 2-alkenal reductase 4151280 5749357 Daci_3774 Delftia acidovorans SPH-1 2-alkenal reductase YP_001564791.1 4149562 R 398578 CDS YP_001564792.1 160899210 5749358 4151579..4152406 1 NC_010002.1 PFAM: Ricin B lectin; KEGG: sco:SCO7212 secreted glycosyl hydrolase; Ricin B lectin 4152406 5749358 Daci_3775 Delftia acidovorans SPH-1 Ricin B lectin YP_001564792.1 4151579 D 398578 CDS YP_001564793.1 160899211 5749359 4152416..4153258 1 NC_010002.1 PFAM: protein of unknown function DUF218; KEGG: pcr:Pcryo_2372 protein of unknown function DUF218; hypothetical protein 4153258 5749359 Daci_3776 Delftia acidovorans SPH-1 hypothetical protein YP_001564793.1 4152416 D 398578 CDS YP_001564794.1 160899212 5749360 4153336..4153806 1 NC_010002.1 KEGG: ajs:Ajs_2044 lactoylglutathione lyase; lactoylglutathione lyase 4153806 5749360 Daci_3777 Delftia acidovorans SPH-1 lactoylglutathione lyase YP_001564794.1 4153336 D 398578 CDS YP_001564795.1 160899213 5749361 complement(4153814..4155883) 1 NC_010002.1 KEGG: aav:Aave_0646 UvrD/REP helicase; UvrD/REP helicase 4155883 5749361 Daci_3778 Delftia acidovorans SPH-1 UvrD/REP helicase YP_001564795.1 4153814 R 398578 CDS YP_001564796.1 160899214 5749362 4156197..4157258 1 NC_010002.1 KEGG: aav:Aave_2518 biotin synthase; TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB; biotin synthase 4157258 5749362 Daci_3779 Delftia acidovorans SPH-1 biotin synthase YP_001564796.1 4156197 D 398578 CDS YP_001564797.1 160899215 5749363 complement(4157295..4158446) 1 NC_010002.1 PFAM: integrase family protein; KEGG: rfr:Rfer_2261 phage integrase; integrase family protein 4158446 5749363 Daci_3780 Delftia acidovorans SPH-1 integrase family protein YP_001564797.1 4157295 R 398578 CDS YP_001564798.1 160899216 5749364 4158735..4159718 1 NC_010002.1 KEGG: rfr:Rfer_2260 hypothetical protein; hypothetical protein 4159718 5749364 Daci_3781 Delftia acidovorans SPH-1 hypothetical protein YP_001564798.1 4158735 D 398578 CDS YP_001564799.1 160899217 5749365 complement(4159740..4160441) 1 NC_010002.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mlo:mll6988 transcriptional regulator; GntR family transcriptional regulator 4160441 5749365 Daci_3782 Delftia acidovorans SPH-1 GntR family transcriptional regulator YP_001564799.1 4159740 R 398578 CDS YP_001564800.1 160899218 5749366 4160727..4162328 1 NC_010002.1 PFAM: gamma-glutamyltranspeptidase; KEGG: ret:RHE_CH02146 gamma-glutamyltranspeptidase protein; gamma-glutamyltransferase 4162328 5749366 Daci_3783 Delftia acidovorans SPH-1 gamma-glutamyltransferase YP_001564800.1 4160727 D 398578 CDS YP_001564801.1 160899219 5749367 complement(4162413..4163081) 1 NC_010002.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bbr:BB1600 putative GntR-family transcriptional regulator; GntR family transcriptional regulator 4163081 5749367 Daci_3784 Delftia acidovorans SPH-1 GntR family transcriptional regulator YP_001564801.1 4162413 R 398578 CDS YP_001564802.1 160899220 5749368 4163254..4164342 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: reh:H16_B0983 probable extra-cytoplasmic solute receptor; hypothetical protein 4164342 5749368 Daci_3785 Delftia acidovorans SPH-1 hypothetical protein YP_001564802.1 4163254 D 398578 CDS YP_001564803.1 160899221 5749369 complement(4164411..4166243) 1 NC_010002.1 PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: aav:Aave_0421 methyl-accepting chemotaxis sensory transducer; Cache sensor-containing methyl-accepting chemotaxis sensory transducer 4166243 5749369 Daci_3786 Delftia acidovorans SPH-1 Cache sensor-containing methyl-accepting chemotaxis sensory transducer YP_001564803.1 4164411 R 398578 CDS YP_001564804.1 160899222 5749370 complement(4166379..4167716) 1 NC_010002.1 PFAM: beta-lactamase; KEGG: mms:mma_2923 6-aminohexanoate-dimer hydrolase; 6-aminohexanoate-dimer hydrolase 4167716 5749370 Daci_3787 Delftia acidovorans SPH-1 6-aminohexanoate-dimer hydrolase YP_001564804.1 4166379 R 398578 CDS YP_001564805.1 160899223 5749371 4167865..4168797 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rme:Rmet_3719 transcriptional regulator, LysR family; LysR family transcriptional regulator 4168797 5749371 Daci_3788 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001564805.1 4167865 D 398578 CDS YP_001564806.1 160899224 5749372 complement(4168802..4169623) 1 NC_010002.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: pfl:PFL_2239 hypothetical protein; cobalamin (vitamin B12) biosynthesis CbiX protein 4169623 5749372 Daci_3789 Delftia acidovorans SPH-1 cobalamin (vitamin B12) biosynthesis CbiX protein YP_001564806.1 4168802 R 398578 CDS YP_001564807.1 160899225 5749373 complement(4169571..4170359) 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO0998 Fe uptake system permease; ABC transporter-like protein 4170359 5749373 Daci_3790 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001564807.1 4169571 R 398578 CDS YP_001564808.1 160899226 5749374 complement(4170356..4171441) 1 NC_010002.1 PFAM: transport system permease protein; KEGG: ava:Ava_B0152 transport system permease protein; transport system permease 4171441 5749374 Daci_3791 Delftia acidovorans SPH-1 transport system permease YP_001564808.1 4170356 R 398578 CDS YP_001564809.1 160899227 5749375 complement(4171428..4172480) 1 NC_010002.1 PFAM: periplasmic binding protein; KEGG: pmy:Pmen_4565 periplasmic binding protein; periplasmic-binding protein 4172480 5749375 Daci_3792 Delftia acidovorans SPH-1 periplasmic-binding protein YP_001564809.1 4171428 R 398578 CDS YP_001564810.1 160899228 5749376 complement(4172480..4174642) 1 NC_010002.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mfa:Mfla_0109 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 4174642 5749376 Daci_3793 Delftia acidovorans SPH-1 TonB-dependent siderophore receptor YP_001564810.1 4172480 R 398578 CDS YP_001564811.1 160899229 5749377 complement(4175095..4175808) 1 NC_010002.1 KEGG: rme:Rmet_3764 hypothetical protein; hypothetical protein 4175808 5749377 Daci_3794 Delftia acidovorans SPH-1 hypothetical protein YP_001564811.1 4175095 R 398578 CDS YP_001564812.1 160899230 5749378 complement(4175809..4176468) 1 NC_010002.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: rso:RSc2568 probable alkylated DNA repair protein; 2OG-Fe(II) oxygenase 4176468 5749378 Daci_3795 Delftia acidovorans SPH-1 2OG-Fe(II) oxygenase YP_001564812.1 4175809 R 398578 CDS YP_001564813.1 160899231 5749379 complement(4176472..4177455) 1 NC_010002.1 KEGG: reu:Reut_B5118 hypothetical protein; hypothetical protein 4177455 5749379 Daci_3796 Delftia acidovorans SPH-1 hypothetical protein YP_001564813.1 4176472 R 398578 CDS YP_001564814.1 160899232 5749380 4177674..4178255 1 NC_010002.1 hypothetical protein 4178255 5749380 Daci_3797 Delftia acidovorans SPH-1 hypothetical protein YP_001564814.1 4177674 D 398578 CDS YP_001564815.1 160899233 5749381 4178403..4179653 1 NC_010002.1 hypothetical protein 4179653 5749381 Daci_3798 Delftia acidovorans SPH-1 hypothetical protein YP_001564815.1 4178403 D 398578 CDS YP_001564816.1 160899234 5749382 4179650..4181848 1 NC_010002.1 KEGG: sfu:Sfum_0786 hypothetical protein; hypothetical protein 4181848 5749382 Daci_3799 Delftia acidovorans SPH-1 hypothetical protein YP_001564816.1 4179650 D 398578 CDS YP_001564817.1 160899235 5749383 complement(4182008..4183105) 1 NC_010002.1 hypothetical protein 4183105 5749383 Daci_3800 Delftia acidovorans SPH-1 hypothetical protein YP_001564817.1 4182008 R 398578 CDS YP_001564818.1 160899236 5749384 4183404..4184411 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: aav:Aave_3271 uncharacterized protein UPF0065; hypothetical protein 4184411 5749384 Daci_3801 Delftia acidovorans SPH-1 hypothetical protein YP_001564818.1 4183404 D 398578 CDS YP_001564819.1 160899237 5749385 4184448..4185131 1 NC_010002.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pol:Bpro_1450 two component transcriptional regulator, winged helix family; two component transcriptional regulator 4185131 5749385 Daci_3802 Delftia acidovorans SPH-1 two component transcriptional regulator YP_001564819.1 4184448 D 398578 CDS YP_001564820.1 160899238 5749386 4185109..4186527 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; KEGG: pol:Bpro_1451 histidine kinase; histidine kinase 4186527 5749386 Daci_3803 Delftia acidovorans SPH-1 histidine kinase YP_001564820.1 4185109 D 398578 CDS YP_001564821.1 160899239 5749387 4186540..4187589 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: bbr:BB5009 putative tricarboxylic transport membrane protein; hypothetical protein 4187589 5749387 Daci_3804 Delftia acidovorans SPH-1 hypothetical protein YP_001564821.1 4186540 D 398578 CDS YP_001564822.1 160899240 5749389 4187934..4188587 1 NC_010002.1 KEGG: har:HEAR0855 hypothetical protein; hypothetical protein 4188587 5749389 Daci_3806 Delftia acidovorans SPH-1 hypothetical protein YP_001564822.1 4187934 D 398578 CDS YP_001564823.1 160899241 5749390 4188653..4189231 1 NC_010002.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mms:mma_1917 RNA polymerase sigma-70 factor, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 4189231 5749390 Daci_3807 Delftia acidovorans SPH-1 ECF subfamily RNA polymerase sigma-24 factor YP_001564823.1 4188653 D 398578 CDS YP_001564824.1 160899242 5749391 4189228..4189974 1 NC_010002.1 KEGG: psp:PSPPH_0345 RNA polymerase sigma-70 family protein; RNA polymerase sigma-70 family protein 4189974 5749391 Daci_3808 Delftia acidovorans SPH-1 RNA polymerase sigma-70 family protein YP_001564824.1 4189228 D 398578 CDS YP_001564825.1 160899243 5749392 complement(4190075..4191253) 1 NC_010002.1 PFAM: porin Gram-negative type; KEGG: reh:H16_A0625 outer membrane protein (porin); porin 4191253 5749392 Daci_3809 Delftia acidovorans SPH-1 porin YP_001564825.1 4190075 R 398578 CDS YP_001564826.1 160899244 5749393 complement(4191370..4191822) 1 NC_010002.1 KEGG: vei:Veis_1359 hypothetical protein; hypothetical protein 4191822 5749393 Daci_3810 Delftia acidovorans SPH-1 hypothetical protein YP_001564826.1 4191370 R 398578 CDS YP_001564827.1 160899245 5749394 4191992..4193272 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: vei:Veis_1366 transcriptional regulator, LysR family; LysR family transcriptional regulator 4193272 5749394 Daci_3811 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001564827.1 4191992 D 398578 CDS YP_001564828.1 160899246 5749395 complement(4193291..4194010) 1 NC_010002.1 PFAM: alpha/beta hydrolase fold; KEGG: vei:Veis_1360 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 4194010 5749395 Daci_3812 Delftia acidovorans SPH-1 alpha/beta hydrolase fold protein YP_001564828.1 4193291 R 398578 CDS YP_001564829.1 160899247 5749396 complement(4194007..4194879) 1 NC_010002.1 extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols; part of the bacterial aromatic compound degradation pathway; protocatechuate 4,5-dioxygenase subunit beta 4194879 5749396 Daci_3813 Delftia acidovorans SPH-1 protocatechuate 4,5-dioxygenase subunit beta YP_001564829.1 4194007 R 398578 CDS YP_001564830.1 160899248 5749397 complement(4194879..4195286) 1 NC_010002.1 extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols; part of the bacterial aromatic compound degradation pathway; protocatechuate 4,5-dioxygenase subunit alpha 4195286 5749397 Daci_3814 Delftia acidovorans SPH-1 protocatechuate 4,5-dioxygenase subunit alpha YP_001564830.1 4194879 R 398578 CDS YP_001564831.1 160899249 5749398 complement(4195325..4196665) 1 NC_010002.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pfl:PFL_3480 major facilitator family transporter; major facilitator transporter 4196665 5749398 Daci_3815 Delftia acidovorans SPH-1 major facilitator transporter YP_001564831.1 4195325 R 398578 CDS YP_001564832.1 160899250 5749399 complement(4196959..4199211) 1 NC_010002.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: aav:Aave_1485 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit 4199211 5749399 Daci_3816 Delftia acidovorans SPH-1 aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit YP_001564832.1 4196959 R 398578 CDS YP_001564833.1 160899251 5749400 complement(4199216..4200166) 1 NC_010002.1 PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: aav:Aave_1486 molybdopterin dehydrogenase, FAD-binding; molybdopterin dehydrogenase FAD-binding 4200166 5749400 Daci_3817 Delftia acidovorans SPH-1 molybdopterin dehydrogenase FAD-binding YP_001564833.1 4199216 R 398578 CDS YP_001564834.1 160899252 5749401 complement(4200163..4200924) 1 NC_010002.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: rle:pRL120302 putative xanthine dehydrogenase YagT iron-sulfur binding subunit; 2Fe-2S iron-sulfur cluster-binding domain-containing protein 4200924 5749401 Daci_3818 Delftia acidovorans SPH-1 2Fe-2S iron-sulfur cluster-binding domain-containing protein YP_001564834.1 4200163 R 398578 CDS YP_001564835.1 160899253 5749402 complement(4201054..4206579) 1 NC_010002.1 SMART: AAA ATPase; KEGG: pmy:Pmen_3386 hypothetical protein; ATPase AAA 4206579 5749402 Daci_3819 Delftia acidovorans SPH-1 ATPase AAA YP_001564835.1 4201054 R 398578 CDS YP_001564836.1 160899254 5749403 complement(4206776..4208851) 1 NC_010002.1 PFAM: band 7 protein; KEGG: pmy:Pmen_3387 hypothetical protein; hypothetical protein 4208851 5749403 Daci_3820 Delftia acidovorans SPH-1 hypothetical protein YP_001564836.1 4206776 R 398578 CDS YP_001564837.1 160899255 5749404 complement(4208950..4209618) 1 NC_010002.1 KEGG: sde:Sde_3478 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6; ubiquinone biosynthesis hydroxylase UbiH/UbiF/VisC/COQ6 4209618 5749404 Daci_3821 Delftia acidovorans SPH-1 ubiquinone biosynthesis hydroxylase UbiH/UbiF/VisC/COQ6 YP_001564837.1 4208950 R 398578 CDS YP_001564838.1 160899256 5749405 complement(4209693..4210403) 1 NC_010002.1 PFAM: PspA/IM30 family protein; KEGG: pfl:PFL_1112 PspA/IM30 family protein; phage shock protein A 4210403 5749405 Daci_3822 Delftia acidovorans SPH-1 phage shock protein A YP_001564838.1 4209693 R 398578 CDS YP_001564839.1 160899257 5749406 complement(4210445..4211113) 1 NC_010002.1 KEGG: pmy:Pmen_3390 hypothetical protein; hypothetical protein 4211113 5749406 Daci_3823 Delftia acidovorans SPH-1 hypothetical protein YP_001564839.1 4210445 R 398578 CDS YP_001564840.1 160899258 5749407 4211368..4214001 1 NC_010002.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase HAMP region domain protein; Cache domain protein; KEGG: vfi:VF0094 sensory box/GGDEF family protein; diguanylate cyclase/phosphodiesterase 4214001 5749407 Daci_3824 Delftia acidovorans SPH-1 diguanylate cyclase/phosphodiesterase YP_001564840.1 4211368 D 398578 CDS YP_001564841.1 160899259 5749408 4214159..4215166 1 NC_010002.1 PFAM: diacylglycerol kinase catalytic region; KEGG: aav:Aave_3490 diacylglycerol kinase, catalytic region; diacylglycerol kinase catalytic subunit 4215166 5749408 Daci_3825 Delftia acidovorans SPH-1 diacylglycerol kinase catalytic subunit YP_001564841.1 4214159 D 398578 CDS YP_001564842.1 160899260 5749409 4215190..4216005 1 NC_010002.1 PFAM: metallophosphoesterase; KEGG: aav:Aave_3489 metallophosphoesterase; metallophosphoesterase 4216005 5749409 Daci_3826 Delftia acidovorans SPH-1 metallophosphoesterase YP_001564842.1 4215190 D 398578 CDS YP_001564843.1 160899261 5749410 4216191..4216559 1 NC_010002.1 PFAM: response regulator receiver; KEGG: aav:Aave_3992 response regulator receiver protein; response regulator receiver protein 4216559 5749410 Daci_3827 Delftia acidovorans SPH-1 response regulator receiver protein YP_001564843.1 4216191 D 398578 CDS YP_001564844.1 160899262 5749411 complement(4216605..4217783) 1 NC_010002.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: aav:Aave_3993 response regulator receiver sensor signal transduction histidine kinase; response regulator receiver sensor signal transduction histidine kinase 4217783 5749411 Daci_3828 Delftia acidovorans SPH-1 response regulator receiver sensor signal transduction histidine kinase YP_001564844.1 4216605 R 398578 CDS YP_001564845.1 160899263 5749412 complement(4217784..4218398) 1 NC_010002.1 PFAM: CheB methylesterase; KEGG: ajs:Ajs_0649 CheB methylesterase; CheB methylesterase 4218398 5749412 Daci_3829 Delftia acidovorans SPH-1 CheB methylesterase YP_001564845.1 4217784 R 398578 CDS YP_001564846.1 160899264 5749413 complement(4218398..4219237) 1 NC_010002.1 PFAM: MCP methyltransferase CheR-type; KEGG: ajs:Ajs_0648 MCP methyltransferase, CheR-type; CheR-type MCP methyltransferase 4219237 5749413 Daci_3830 Delftia acidovorans SPH-1 CheR-type MCP methyltransferase YP_001564846.1 4218398 R 398578 CDS YP_001564847.1 160899265 5749414 complement(4219251..4222784) 1 NC_010002.1 PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; CHASE3 domain protein; KEGG: aav:Aave_3996 multi-sensor hybrid histidine kinase; GAF sensor hybrid histidine kinase 4222784 5749414 Daci_3831 Delftia acidovorans SPH-1 GAF sensor hybrid histidine kinase YP_001564847.1 4219251 R 398578 CDS YP_001564848.1 160899266 5749415 4223002..4223391 1 NC_010002.1 KEGG: rme:Rmet_4756 hypothetical protein; hypothetical protein 4223391 5749415 Daci_3832 Delftia acidovorans SPH-1 hypothetical protein YP_001564848.1 4223002 D 398578 CDS YP_001564849.1 160899267 5749416 4223498..4223905 1 NC_010002.1 hypothetical protein 4223905 5749416 Daci_3833 Delftia acidovorans SPH-1 hypothetical protein YP_001564849.1 4223498 D 398578 CDS YP_001564850.1 160899268 5749417 complement(4223952..4225739) 1 NC_010002.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: ajs:Ajs_0160 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 4225739 5749417 Daci_3834 Delftia acidovorans SPH-1 methyl-accepting chemotaxis sensory transducer YP_001564850.1 4223952 R 398578 CDS YP_001564851.1 160899269 5749418 complement(4225781..4226617) 1 NC_010002.1 KEGG: spn:SP_1772 cell wall surface anchor family protein; hypothetical protein 4226617 5749418 Daci_3835 Delftia acidovorans SPH-1 hypothetical protein YP_001564851.1 4225781 R 398578 CDS YP_001564852.1 160899270 5749419 complement(4226841..4227779) 1 NC_010002.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pmy:Pmen_0702 transcriptional regulator, GntR family; GntR family transcriptional regulator 4227779 5749419 Daci_3836 Delftia acidovorans SPH-1 GntR family transcriptional regulator YP_001564852.1 4226841 R 398578 CDS YP_001564853.1 160899271 5749420 complement(4228393..4228875) 1 NC_010002.1 PFAM: protein of unknown function DUF796; KEGG: aav:Aave_1465 protein of unknown function DUF796; hypothetical protein 4228875 5749420 Daci_3837 Delftia acidovorans SPH-1 hypothetical protein YP_001564853.1 4228393 R 398578 CDS YP_001564854.1 160899272 5749421 4229490..4231553 1 NC_010002.1 PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: aav:Aave_1466 serine/threonine protein kinase; serine/threonine protein kinase 4231553 5749421 Daci_3838 Delftia acidovorans SPH-1 serine/threonine protein kinase YP_001564854.1 4229490 D 398578 CDS YP_001564855.1 160899273 5749422 4231563..4232351 1 NC_010002.1 KEGG: aav:Aave_1466 serine/threonine protein kinase; hypothetical protein 4232351 5749422 Daci_3839 Delftia acidovorans SPH-1 hypothetical protein YP_001564855.1 4231563 D 398578 CDS YP_001564856.1 160899274 5749423 4232354..4232848 1 NC_010002.1 KEGG: aav:Aave_1467 tetratricopeptide TPR_2 repeat protein; hypothetical protein 4232848 5749423 Daci_3840 Delftia acidovorans SPH-1 hypothetical protein YP_001564856.1 4232354 D 398578 CDS YP_001564857.1 160899275 5749424 4232891..4234936 1 NC_010002.1 TIGRFAM: type VI secretion system FHA domain protein; PFAM: Forkhead-associated protein; KEGG: aav:Aave_1468 FHA domain containing protein; FHA domain-containing protein 4234936 5749424 Daci_3841 Delftia acidovorans SPH-1 FHA domain-containing protein YP_001564857.1 4232891 D 398578 CDS YP_001564858.1 160899276 5749425 4234933..4235721 1 NC_010002.1 PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: aav:Aave_1469 protein serine/threonine phosphatase; protein serine/threonine phosphatase 4235721 5749425 Daci_3842 Delftia acidovorans SPH-1 protein serine/threonine phosphatase YP_001564858.1 4234933 D 398578 CDS YP_001564859.1 160899277 5749426 4235741..4236340 1 NC_010002.1 KEGG: aav:Aave_1470 lipoprotein, putative; putative lipoprotein 4236340 5749426 Daci_3843 Delftia acidovorans SPH-1 putative lipoprotein YP_001564859.1 4235741 D 398578 CDS YP_001564860.1 160899278 5749427 4236358..4237692 1 NC_010002.1 TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876; KEGG: aav:Aave_1471 protein of unknown function DUF876; type VI secretion protein 4237692 5749427 Daci_3844 Delftia acidovorans SPH-1 type VI secretion protein YP_001564860.1 4236358 D 398578 CDS YP_001564861.1 160899279 5749428 4237714..4239045 1 NC_010002.1 TIGRFAM: type IV / VI secretion system protein, DotU family; type VI secretion system OmpA/MotB family protein; PFAM: OmpA/MotB domain protein; KEGG: aav:Aave_1472 OmpA/MotB domain protein; hypothetical protein 4239045 5749428 Daci_3845 Delftia acidovorans SPH-1 hypothetical protein YP_001564861.1 4237714 D 398578 CDS YP_001564862.1 160899280 5749429 4239050..4242706 1 NC_010002.1 TIGRFAM: type VI secretion protein IcmF; PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: aav:Aave_1473 ImcF domain protein; type VI secretion protein IcmF 4242706 5749429 Daci_3846 Delftia acidovorans SPH-1 type VI secretion protein IcmF YP_001564862.1 4239050 D 398578 CDS YP_001564863.1 160899281 5749430 4242688..4243392 1 NC_010002.1 KEGG: aav:Aave_1474 hypothetical protein; hypothetical protein 4243392 5749430 Daci_3847 Delftia acidovorans SPH-1 hypothetical protein YP_001564863.1 4242688 D 398578 CDS YP_001564864.1 160899282 5749431 4243450..4244487 1 NC_010002.1 TIGRFAM: type VI secretion-associated protein, ImpA family; PFAM: ImpA domain protein; KEGG: aav:Aave_1475 ImpA domain protein; ImpA family type VI secretion-associated protein 4244487 5749431 Daci_3848 Delftia acidovorans SPH-1 ImpA family type VI secretion-associated protein YP_001564864.1 4243450 D 398578 CDS YP_001564865.1 160899283 5749432 4244484..4244906 1 NC_010002.1 KEGG: aav:Aave_3097 hypothetical protein; hypothetical protein 4244906 5749432 Daci_3849 Delftia acidovorans SPH-1 hypothetical protein YP_001564865.1 4244484 D 398578 CDS YP_001564866.1 160899284 5749433 4245030..4245572 1 NC_010002.1 TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein; KEGG: aav:Aave_1476 uncharacterized conserved protein UCP028301; type VI secretion protein 4245572 5749433 Daci_3850 Delftia acidovorans SPH-1 type VI secretion protein YP_001564866.1 4245030 D 398578 CDS YP_001564867.1 160899285 5749434 4245601..4247094 1 NC_010002.1 TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877; KEGG: aav:Aave_1477 protein of unknown function DUF877; EvpB family type VI secretion protein 4247094 5749434 Daci_3851 Delftia acidovorans SPH-1 EvpB family type VI secretion protein YP_001564867.1 4245601 D 398578 CDS YP_001564868.1 160899286 5749435 4247099..4247596 1 NC_010002.1 KEGG: aav:Aave_1071 hypothetical protein; hypothetical protein 4247596 5749435 Daci_3852 Delftia acidovorans SPH-1 hypothetical protein YP_001564868.1 4247099 D 398578 CDS YP_001564869.1 160899287 5749436 4247670..4248578 1 NC_010002.1 KEGG: aav:Aave_1107 hypothetical protein; hypothetical protein 4248578 5749436 Daci_3853 Delftia acidovorans SPH-1 hypothetical protein YP_001564869.1 4247670 D 398578 CDS YP_001564870.1 160899288 5749437 4248655..4249026 1 NC_010002.1 KEGG: pfl:PFL_5498 putative cytoplasmic protein; putative cytoplasmic protein 4249026 5749437 Daci_3854 Delftia acidovorans SPH-1 putative cytoplasmic protein YP_001564870.1 4248655 D 398578 CDS YP_001564871.1 160899289 5749438 4249035..4249595 1 NC_010002.1 KEGG: pae:PA2724 hypothetical protein; hypothetical protein 4249595 5749438 Daci_3855 Delftia acidovorans SPH-1 hypothetical protein YP_001564871.1 4249035 D 398578 CDS YP_001564872.1 160899290 5749439 4249644..4250453 1 NC_010002.1 PFAM: virulence protein SciE type; KEGG: aav:Aave_1478 virulence protein, SciE type; virulence protein SciE type 4250453 5749439 Daci_3856 Delftia acidovorans SPH-1 virulence protein SciE type YP_001564872.1 4249644 D 398578 CDS YP_001564873.1 160899291 5749440 4250465..4250911 1 NC_010002.1 KEGG: aav:Aave_0193 hypothetical protein; hypothetical protein 4250911 5749440 Daci_3857 Delftia acidovorans SPH-1 hypothetical protein YP_001564873.1 4250465 D 398578 CDS YP_001564874.1 160899292 5749441 4250923..4251477 1 NC_010002.1 TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein; KEGG: aav:Aave_1479 protein of unknown function DUF1316; type VI secretion system lysozyme-like protein 4251477 5749441 Daci_3858 Delftia acidovorans SPH-1 type VI secretion system lysozyme-like protein YP_001564874.1 4250923 D 398578 CDS YP_001564875.1 160899293 5749442 4251501..4253375 1 NC_010002.1 TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879; KEGG: aav:Aave_1480 protein of unknown function DUF879; type VI secretion protein 4253375 5749442 Daci_3859 Delftia acidovorans SPH-1 type VI secretion protein YP_001564875.1 4251501 D 398578 CDS YP_001564876.1 160899294 5749443 4253462..4254562 1 NC_010002.1 TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305; KEGG: aav:Aave_1481 protein of unknown function DUF1305; type VI secretion protein 4254562 5749443 Daci_3860 Delftia acidovorans SPH-1 type VI secretion protein YP_001564876.1 4253462 D 398578 CDS YP_001564877.1 160899295 5749444 4254603..4255436 1 NC_010002.1 KEGG: aav:Aave_0973 hypothetical protein; hypothetical protein 4255436 5749444 Daci_3861 Delftia acidovorans SPH-1 hypothetical protein YP_001564877.1 4254603 D 398578 CDS YP_001564878.1 160899296 5749445 4255472..4256077 1 NC_010002.1 KEGG: aav:Aave_0972 hypothetical protein; hypothetical protein 4256077 5749445 Daci_3862 Delftia acidovorans SPH-1 hypothetical protein YP_001564878.1 4255472 D 398578 CDS YP_001564879.1 160899297 5749446 4256082..4256645 1 NC_010002.1 KEGG: aav:Aave_0972 hypothetical protein; hypothetical protein 4256645 5749446 Daci_3863 Delftia acidovorans SPH-1 hypothetical protein YP_001564879.1 4256082 D 398578 CDS YP_001564880.1 160899298 5749447 4256651..4259437 1 NC_010002.1 KEGG: aav:Aave_1482 ATPase AAA-2 domain protein; TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; type VI secretion ATPase 4259437 5749447 Daci_3864 Delftia acidovorans SPH-1 type VI secretion ATPase YP_001564880.1 4256651 D 398578 CDS YP_001564881.1 160899299 5749448 4259434..4261725 1 NC_010002.1 PFAM: peptidase S41; KEGG: rrs:RoseRS_3207 peptidase S41; peptidase S41 4261725 5749448 Daci_3865 Delftia acidovorans SPH-1 peptidase S41 YP_001564881.1 4259434 D 398578 CDS YP_001564882.1 160899300 5749449 4261762..4262721 1 NC_010002.1 KEGG: aav:Aave_3422 hypothetical protein; hypothetical protein 4262721 5749449 Daci_3866 Delftia acidovorans SPH-1 hypothetical protein YP_001564882.1 4261762 D 398578 CDS YP_001564883.1 160899301 5749450 4262724..4263881 1 NC_010002.1 KEGG: aav:Aave_3423 hypothetical protein; hypothetical protein 4263881 5749450 Daci_3867 Delftia acidovorans SPH-1 hypothetical protein YP_001564883.1 4262724 D 398578 CDS YP_001564884.1 160899302 5749451 4263992..4266184 1 NC_010002.1 TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; KEGG: aav:Aave_2127 rhs element Vgr protein; ImpA family type VI secretion-associated protein 4266184 5749451 Daci_3868 Delftia acidovorans SPH-1 ImpA family type VI secretion-associated protein YP_001564884.1 4263992 D 398578 CDS YP_001564885.1 160899303 5749452 4266195..4267511 1 NC_010002.1 KEGG: aav:Aave_2128 hypothetical protein; hypothetical protein 4267511 5749452 Daci_3869 Delftia acidovorans SPH-1 hypothetical protein YP_001564885.1 4266195 D 398578 CDS YP_001564886.1 160899304 5749453 4267504..4267863 1 NC_010002.1 KEGG: aav:Aave_2129 hypothetical protein; hypothetical protein 4267863 5749453 Daci_3870 Delftia acidovorans SPH-1 hypothetical protein YP_001564886.1 4267504 D 398578 CDS YP_001564887.1 160899305 5749454 4267870..4268868 1 NC_010002.1 KEGG: aav:Aave_2130 hypothetical protein; hypothetical protein 4268868 5749454 Daci_3871 Delftia acidovorans SPH-1 hypothetical protein YP_001564887.1 4267870 D 398578 CDS YP_001564888.1 160899306 5749455 4268875..4269345 1 NC_010002.1 hypothetical protein 4269345 5749455 Daci_3872 Delftia acidovorans SPH-1 hypothetical protein YP_001564888.1 4268875 D 398578 CDS YP_001564889.1 160899307 5749456 4269359..4270423 1 NC_010002.1 KEGG: aav:Aave_2133 hypothetical protein; hypothetical protein 4270423 5749456 Daci_3873 Delftia acidovorans SPH-1 hypothetical protein YP_001564889.1 4269359 D 398578 CDS YP_001564890.1 160899308 5749457 4270598..4271143 1 NC_010002.1 TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; KEGG: aav:Aave_2740 YD repeat protein; YD repeat-containing protein 4271143 5749457 Daci_3874 Delftia acidovorans SPH-1 YD repeat-containing protein YP_001564890.1 4270598 D 398578 CDS YP_001564891.1 160899309 5749458 complement(4271238..4271477) 1 NC_010002.1 hypothetical protein 4271477 5749458 Daci_3875 Delftia acidovorans SPH-1 hypothetical protein YP_001564891.1 4271238 R 398578 CDS YP_001564892.1 160899310 5749459 4271618..4271944 1 NC_010002.1 KEGG: aav:Aave_2132 hypothetical protein; hypothetical protein 4271944 5749459 Daci_3876 Delftia acidovorans SPH-1 hypothetical protein YP_001564892.1 4271618 D 398578 CDS YP_001564893.1 160899311 5749460 4272088..4272555 1 NC_010002.1 hypothetical protein 4272555 5749460 Daci_3877 Delftia acidovorans SPH-1 hypothetical protein YP_001564893.1 4272088 D 398578 CDS YP_001564894.1 160899312 5749461 4272556..4273113 1 NC_010002.1 KEGG: aav:Aave_2740 YD repeat protein; hypothetical protein 4273113 5749461 Daci_3878 Delftia acidovorans SPH-1 hypothetical protein YP_001564894.1 4272556 D 398578 CDS YP_001564895.1 160899313 5749462 4273124..4273702 1 NC_010002.1 hypothetical protein 4273702 5749462 Daci_3879 Delftia acidovorans SPH-1 hypothetical protein YP_001564895.1 4273124 D 398578 CDS YP_001564896.1 160899314 5749463 4273744..4274181 1 NC_010002.1 KEGG: aav:Aave_2741 hypothetical protein; hypothetical protein 4274181 5749463 Daci_3880 Delftia acidovorans SPH-1 hypothetical protein YP_001564896.1 4273744 D 398578 CDS YP_001564897.1 160899315 5749464 4274932..4275645 1 NC_010002.1 KEGG: mms:mma_1666 hypothetical protein; hypothetical protein 4275645 5749464 Daci_3881 Delftia acidovorans SPH-1 hypothetical protein YP_001564897.1 4274932 D 398578 CDS YP_001564898.1 160899316 5749465 complement(4275686..4276351) 1 NC_010002.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dde:Dde_0154 molybdenum ABC-transporter, permease protein (ModB)-like; binding-protein-dependent transport system inner membrane protein 4276351 5749465 Daci_3882 Delftia acidovorans SPH-1 binding-protein-dependent transport system inner membrane protein YP_001564898.1 4275686 R 398578 CDS YP_001564899.1 160899317 5749466 complement(4276387..4277127) 1 NC_010002.1 TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; KEGG: azo:azo3846 putative molybdate transport system substrate-binding protein; molybdenum ABC transporter periplasmic molybdate-binding protein 4277127 5749466 Daci_3883 Delftia acidovorans SPH-1 molybdenum ABC transporter periplasmic molybdate-binding protein YP_001564899.1 4276387 R 398578 CDS YP_001564900.1 160899318 5749467 complement(4277322..4278050) 1 NC_010002.1 KEGG: rpb:RPB_3526 hypothetical protein; hypothetical protein 4278050 5749467 Daci_3884 Delftia acidovorans SPH-1 hypothetical protein YP_001564900.1 4277322 R 398578 CDS YP_001564901.1 160899319 5749468 complement(4278246..4280162) 1 NC_010002.1 PFAM: AMP-dependent synthetase and ligase; KEGG: pae:PA3860 acyl-CoA synthase; AMP-dependent synthetase/ligase 4280162 5749468 Daci_3885 Delftia acidovorans SPH-1 AMP-dependent synthetase/ligase YP_001564901.1 4278246 R 398578 CDS YP_001564902.1 160899320 5749469 complement(4280167..4281222) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_3733 uncharacterized protein UPF0065; hypothetical protein 4281222 5749469 Daci_3886 Delftia acidovorans SPH-1 hypothetical protein YP_001564902.1 4280167 R 398578 CDS YP_001564903.1 160899321 5749470 4281307..4282257 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_3740 transcriptional regulator, LysR family; LysR family transcriptional regulator 4282257 5749470 Daci_3887 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001564903.1 4281307 D 398578 CDS YP_001564904.1 160899322 5749471 4282313..4282894 1 NC_010002.1 PFAM: regulatory protein TetR; KEGG: psb:Psyr_2933 regulatory protein, TetR; TetR family transcriptional regulator 4282894 5749471 Daci_3888 Delftia acidovorans SPH-1 TetR family transcriptional regulator YP_001564904.1 4282313 D 398578 CDS YP_001564905.1 160899323 5749472 4283009..4284109 1 NC_010002.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: psb:Psyr_2934 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase 4284109 5749472 Daci_3889 Delftia acidovorans SPH-1 NADH:flavin oxidoreductase YP_001564905.1 4283009 D 398578 CDS YP_001564906.1 160899324 5749473 4284190..4284822 1 NC_010002.1 KEGG: bpd:BURPS668_A0697 hypothetical protein; hypothetical protein 4284822 5749473 Daci_3890 Delftia acidovorans SPH-1 hypothetical protein YP_001564906.1 4284190 D 398578 CDS YP_001564907.1 160899325 5749474 4284860..4285444 1 NC_010002.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: bur:Bcep18194_A4508 flavin reductase-like, FMN-binding; flavin reductase domain-containing protein 4285444 5749474 Daci_3891 Delftia acidovorans SPH-1 flavin reductase domain-containing protein YP_001564907.1 4284860 D 398578 CDS YP_001564908.1 160899326 5749475 4285462..4286316 1 NC_010002.1 KEGG: aav:Aave_2747 zinc metalloproteinase Mpr protein; zinc metalloproteinase Mpr protein 4286316 5749475 Daci_3892 Delftia acidovorans SPH-1 zinc metalloproteinase Mpr protein YP_001564908.1 4285462 D 398578 CDS YP_001564909.1 160899327 5749476 complement(4286383..4286880) 1 NC_010002.1 PFAM: OsmC family protein; KEGG: aav:Aave_0009 OsmC family protein; OsmC family protein 4286880 5749476 Daci_3893 Delftia acidovorans SPH-1 OsmC family protein YP_001564909.1 4286383 R 398578 CDS YP_001564910.1 160899328 5749477 complement(4286979..4287356) 1 NC_010002.1 KEGG: hch:HCH_03995 hypothetical protein; hypothetical protein 4287356 5749477 Daci_3894 Delftia acidovorans SPH-1 hypothetical protein YP_001564910.1 4286979 R 398578 CDS YP_001564911.1 160899329 5749478 complement(4287439..4288890) 1 NC_010002.1 PFAM: major facilitator superfamily MFS_1; KEGG: xac:XAC3001 MFS transporter; major facilitator transporter 4288890 5749478 Daci_3895 Delftia acidovorans SPH-1 major facilitator transporter YP_001564911.1 4287439 R 398578 CDS YP_001564912.1 160899330 5749479 complement(4288963..4290261) 1 NC_010002.1 hypothetical protein 4290261 5749479 Daci_3896 Delftia acidovorans SPH-1 hypothetical protein YP_001564912.1 4288963 R 398578 CDS YP_001564913.1 160899331 5749480 complement(4290258..4292702) 1 NC_010002.1 hypothetical protein 4292702 5749480 Daci_3897 Delftia acidovorans SPH-1 hypothetical protein YP_001564913.1 4290258 R 398578 CDS YP_001564914.1 160899332 5749481 complement(4292768..4294006) 1 NC_010002.1 hypothetical protein 4294006 5749481 Daci_3898 Delftia acidovorans SPH-1 hypothetical protein YP_001564914.1 4292768 R 398578 CDS YP_001564915.1 160899333 5749482 4294494..4295435 1 NC_010002.1 PFAM: restriction endonuclease; KEGG: aav:Aave_1379 restriction endonuclease; restriction endonuclease 4295435 5749482 Daci_3899 Delftia acidovorans SPH-1 restriction endonuclease YP_001564915.1 4294494 D 398578 CDS YP_001564916.1 160899334 5749483 4295821..4296624 1 NC_010002.1 KEGG: pst:PSPTO_4754 hypothetical protein; hypothetical protein 4296624 5749483 Daci_3900 Delftia acidovorans SPH-1 hypothetical protein YP_001564916.1 4295821 D 398578 CDS YP_001564917.1 160899335 5749484 complement(4297375..4297773) 1 NC_010002.1 PFAM: protein of unknown function DUF1232; KEGG: bbr:BB1021 hypothetical protein; hypothetical protein 4297773 5749484 Daci_3901 Delftia acidovorans SPH-1 hypothetical protein YP_001564917.1 4297375 R 398578 CDS YP_001564918.1 160899336 5749485 4298346..4299278 1 NC_010002.1 KEGG: aav:Aave_3264 hypothetical protein; hypothetical protein 4299278 5749485 Daci_3902 Delftia acidovorans SPH-1 hypothetical protein YP_001564918.1 4298346 D 398578 CDS YP_001564919.1 160899337 5749486 4299272..4299781 1 NC_010002.1 KEGG: aav:Aave_1403 hypothetical protein; hypothetical protein 4299781 5749486 Daci_3903 Delftia acidovorans SPH-1 hypothetical protein YP_001564919.1 4299272 D 398578 CDS YP_001564920.1 160899338 5749487 4299930..4300499 1 NC_010002.1 KEGG: aav:Aave_3265 hypothetical protein; hypothetical protein 4300499 5749487 Daci_3904 Delftia acidovorans SPH-1 hypothetical protein YP_001564920.1 4299930 D 398578 CDS YP_001564921.1 160899339 5749488 complement(4300918..4301106) 1 NC_010002.1 hypothetical protein 4301106 5749488 Daci_3905 Delftia acidovorans SPH-1 hypothetical protein YP_001564921.1 4300918 R 398578 CDS YP_001564922.1 160899340 5749489 4301126..4301314 1 NC_010002.1 KEGG: aav:Aave_3265 hypothetical protein; hypothetical protein 4301314 5749489 Daci_3906 Delftia acidovorans SPH-1 hypothetical protein YP_001564922.1 4301126 D 398578 CDS YP_001564923.1 160899341 5749490 4301652..4301936 1 NC_010002.1 KEGG: aav:Aave_3265 hypothetical protein; hypothetical protein 4301936 5749490 Daci_3907 Delftia acidovorans SPH-1 hypothetical protein YP_001564923.1 4301652 D 398578 CDS YP_001564924.1 160899342 5749491 complement(4301978..4303477) 1 NC_010002.1 KEGG: aav:Aave_4010 hypothetical protein; hypothetical protein 4303477 5749491 Daci_3908 Delftia acidovorans SPH-1 hypothetical protein YP_001564924.1 4301978 R 398578 CDS YP_001564925.1 160899343 5749492 complement(4303738..4304772) 1 NC_010002.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: mpt:Mpe_A0968 putative transcription regulator transcription regulator protein; LacI family transcriptional regulator 4304772 5749492 Daci_3909 Delftia acidovorans SPH-1 LacI family transcriptional regulator YP_001564925.1 4303738 R 398578 CDS YP_001564926.1 160899344 5749493 4304942..4305940 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: reu:Reut_B3884 hypothetical protein; hypothetical protein 4305940 5749493 Daci_3910 Delftia acidovorans SPH-1 hypothetical protein YP_001564926.1 4304942 D 398578 CDS YP_001564927.1 160899345 5749494 4305937..4306818 1 NC_010002.1 PFAM: HpcH/HpaI aldolase; KEGG: aav:Aave_4270 2-dehydro-3-deoxyglucarate aldolase; 2-dehydro-3-deoxyglucarate aldolase 4306818 5749494 Daci_3911 Delftia acidovorans SPH-1 2-dehydro-3-deoxyglucarate aldolase YP_001564927.1 4305937 D 398578 CDS YP_001564928.1 160899346 5749495 4306815..4308542 1 NC_010002.1 catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase 4308542 5749495 Daci_3912 Delftia acidovorans SPH-1 dihydroxy-acid dehydratase YP_001564928.1 4306815 D 398578 CDS YP_001564929.1 160899347 5749496 4309299..4311068 1 NC_010002.1 TIGRFAM: YidE/YbjL duplication; PFAM: TrkA-C domain protein; YidE/YbjL duplication domain protein; KEGG: oan:Oant_3482 YidE/YbjL duplication; YidE/YbjL domain-containing protein 4311068 5749496 Daci_3913 Delftia acidovorans SPH-1 YidE/YbjL domain-containing protein YP_001564929.1 4309299 D 398578 CDS YP_001564930.1 160899348 5749497 4311133..4312728 1 NC_010002.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 4312728 5749497 Daci_3914 Delftia acidovorans SPH-1 aspartate aminotransferase YP_001564930.1 4311133 D 398578 CDS YP_001564931.1 160899349 5749498 complement(4312770..4313720) 1 NC_010002.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: rso:RSc0614 hypothetical protein; hypothetical protein 4313720 5749498 Daci_3915 Delftia acidovorans SPH-1 hypothetical protein YP_001564931.1 4312770 R 398578 CDS YP_001564932.1 160899350 5749499 4313796..4314698 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc0615 probable transcription regulator protein; LysR family transcriptional regulator 4314698 5749499 Daci_3916 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001564932.1 4313796 D 398578 CDS YP_001564933.1 160899351 5749500 complement(4314728..4316098) 1 NC_010002.1 KEGG: reu:Reut_B5656 hypothetical protein; hypothetical protein 4316098 5749500 Daci_3917 Delftia acidovorans SPH-1 hypothetical protein YP_001564933.1 4314728 R 398578 CDS YP_001564934.1 160899352 5749501 complement(4316095..4319211) 1 NC_010002.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: reu:Reut_B5655 heavy metal efflux pump CzcA; CzcA family heavy metal efflux protein 4319211 5749501 Daci_3918 Delftia acidovorans SPH-1 CzcA family heavy metal efflux protein YP_001564934.1 4316095 R 398578 CDS YP_001564935.1 160899353 5749502 complement(4319211..4320332) 1 NC_010002.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: reu:Reut_B5654 secretion protein HlyD; RND family efflux transporter MFP subunit 4320332 5749502 Daci_3919 Delftia acidovorans SPH-1 RND family efflux transporter MFP subunit YP_001564935.1 4319211 R 398578 CDS YP_001564936.1 160899354 5749503 complement(4320435..4320851) 1 NC_010002.1 KEGG: rme:Rmet_5683 hypothetical protein; hypothetical protein 4320851 5749503 Daci_3920 Delftia acidovorans SPH-1 hypothetical protein YP_001564936.1 4320435 R 398578 CDS YP_001564937.1 160899355 5749504 4321127..4322029 1 NC_010002.1 PFAM: nitroreductase; regulatory protein LysR; KEGG: rfr:Rfer_3637 nitroreductase; nitroreductase 4322029 5749504 Daci_3921 Delftia acidovorans SPH-1 nitroreductase YP_001564937.1 4321127 D 398578 CDS YP_001564938.1 160899356 5749505 4322182..4323093 1 NC_010002.1 PFAM: protein of unknown function UPF0187; KEGG: rme:Rmet_5346 protein of unknown function UPF0187; hypothetical protein 4323093 5749505 Daci_3922 Delftia acidovorans SPH-1 hypothetical protein YP_001564938.1 4322182 D 398578 CDS YP_001564939.1 160899357 5749506 4323165..4323374 1 NC_010002.1 KEGG: sbl:Sbal_0847 hypothetical protein; hypothetical protein 4323374 5749506 Daci_3923 Delftia acidovorans SPH-1 hypothetical protein YP_001564939.1 4323165 D 398578 CDS YP_001564940.1 160899358 5749507 complement(4323392..4324372) 1 NC_010002.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bur:Bcep18194_B3090 esterase/lipase/thioesterase; alpha/beta hydrolase domain-containing protein 4324372 5749507 Daci_3924 Delftia acidovorans SPH-1 alpha/beta hydrolase domain-containing protein YP_001564940.1 4323392 R 398578 CDS YP_001564941.1 160899359 5749508 complement(4324375..4325271) 1 NC_010002.1 PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_B3091 alpha/beta hydrolase; alpha/beta hydrolase fold protein 4325271 5749508 Daci_3925 Delftia acidovorans SPH-1 alpha/beta hydrolase fold protein YP_001564941.1 4324375 R 398578 CDS YP_001564942.1 160899360 5749509 complement(4325311..4326366) 1 NC_010002.1 PFAM: AP endonuclease 2 domain protein; Xylose isomerase domain protein TIM barrel; KEGG: bur:Bcep18194_B3092 xylose isomerase-like TIM barrel; xylose isomerase domain-containing protein 4326366 5749509 Daci_3926 Delftia acidovorans SPH-1 xylose isomerase domain-containing protein YP_001564942.1 4325311 R 398578 CDS YP_001564943.1 160899361 5749510 4326509..4327135 1 NC_010002.1 PFAM: regulatory protein TetR; KEGG: bur:Bcep18194_B3093 transcriptional regulator, TetR family; TetR family transcriptional regulator 4327135 5749510 Daci_3927 Delftia acidovorans SPH-1 TetR family transcriptional regulator YP_001564943.1 4326509 D 398578 CDS YP_001564944.1 160899362 5749511 complement(4327140..4328240) 1 NC_010002.1 KEGG: pfl:PFL_3184 acyl-CoA dehydrogenase, putative; acyl-CoA dehydrogenase 4328240 5749511 Daci_3928 Delftia acidovorans SPH-1 acyl-CoA dehydrogenase YP_001564944.1 4327140 R 398578 CDS YP_001564945.1 160899363 5749512 complement(4328338..4329669) 1 NC_010002.1 PFAM: cytochrome c class I; KEGG: spe:Spro_2490 gluconate 2-dehydrogenase (acceptor); gluconate 2-dehydrogenase 4329669 5749512 Daci_3929 Delftia acidovorans SPH-1 gluconate 2-dehydrogenase YP_001564945.1 4328338 R 398578 CDS YP_001564946.1 160899364 5749513 complement(4329687..4331987) 1 NC_010002.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: spe:Spro_2491 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit 4331987 5749513 Daci_3930 Delftia acidovorans SPH-1 aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit YP_001564946.1 4329687 R 398578 CDS YP_001564947.1 160899365 5749514 complement(4331984..4332571) 1 NC_010002.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: spe:Spro_2492 (2Fe-2S)-binding domain protein; 2Fe-2S iron-sulfur cluster-binding domain-containing protein 4332571 5749514 Daci_3931 Delftia acidovorans SPH-1 2Fe-2S iron-sulfur cluster-binding domain-containing protein YP_001564947.1 4331984 R 398578 CDS YP_001564948.1 160899366 5749515 complement(4332752..4333003) 1 NC_010002.1 hypothetical protein 4333003 5749515 Daci_3932 Delftia acidovorans SPH-1 hypothetical protein YP_001564948.1 4332752 R 398578 CDS YP_001564949.1 160899367 5749516 complement(4333199..4333555) 1 NC_010002.1 KEGG: aav:Aave_3957 hypothetical protein; hypothetical protein 4333555 5749516 Daci_3933 Delftia acidovorans SPH-1 hypothetical protein YP_001564949.1 4333199 R 398578 CDS YP_001564950.1 160899368 5749517 4333991..4334266 1 NC_010002.1 PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: aav:Aave_1150 histone family protein nucleoid-structuring protein H-NS; histone family protein nucleoid-structuring protein H-NS 4334266 5749517 Daci_3934 Delftia acidovorans SPH-1 histone family protein nucleoid-structuring protein H-NS YP_001564950.1 4333991 D 398578 CDS YP_001564951.1 160899369 5749518 4334499..4335314 1 NC_010002.1 PFAM: Hpt domain protein; KEGG: bam:Bamb_5151 periplasmic sensor hybrid histidine kinase; Hpt domain-containing protein 4335314 5749518 Daci_3935 Delftia acidovorans SPH-1 Hpt domain-containing protein YP_001564951.1 4334499 D 398578 CDS YP_001564952.1 160899370 5749519 complement(4335326..4336021) 1 NC_010002.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: bpd:BURPS668_A0187 regulatory protein, LuxR:response regulator receiver; two component LuxR family transcriptional regulator 4336021 5749519 Daci_3936 Delftia acidovorans SPH-1 two component LuxR family transcriptional regulator YP_001564952.1 4335326 R 398578 CDS YP_001564953.1 160899371 5749520 complement(4336085..4339015) 1 NC_010002.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: bpd:BURPS668_A0180 response regulator/sensor histidine kinase; Hpt sensor hybrid histidine kinase 4339015 5749520 Daci_3937 Delftia acidovorans SPH-1 Hpt sensor hybrid histidine kinase YP_001564953.1 4336085 R 398578 CDS YP_001564954.1 160899372 5749521 complement(4339148..4339804) 1 NC_010002.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: pae:PA4080 probable response regulator; two component LuxR family transcriptional regulator 4339804 5749521 Daci_3938 Delftia acidovorans SPH-1 two component LuxR family transcriptional regulator YP_001564954.1 4339148 R 398578 CDS YP_001564955.1 160899373 5749522 4340111..4340587 1 NC_010002.1 KEGG: aav:Aave_2791 lactoylglutathione lyase; TIGRFAM: lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; lactoylglutathione lyase 4340587 5749522 Daci_3939 Delftia acidovorans SPH-1 lactoylglutathione lyase YP_001564955.1 4340111 D 398578 CDS YP_001564956.1 160899374 5749523 complement(4340675..4341199) 1 NC_010002.1 PFAM: OmpA/MotB domain protein; KEGG: ajs:Ajs_2055 OmpA/MotB domain protein; OmpA/MotB domain-containing protein 4341199 5749523 Daci_3940 Delftia acidovorans SPH-1 OmpA/MotB domain-containing protein YP_001564956.1 4340675 R 398578 CDS YP_001564957.1 160899375 5749524 4341439..4342065 1 NC_010002.1 PFAM: ChaC family protein; KEGG: ajs:Ajs_2056 ChaC family protein; ChaC family protein 4342065 5749524 Daci_3941 Delftia acidovorans SPH-1 ChaC family protein YP_001564957.1 4341439 D 398578 CDS YP_001564958.1 160899376 5749525 4342201..4342839 1 NC_010002.1 PFAM: superoxide dismutase copper/zinc binding; KEGG: pol:Bpro_3554 superoxide dismutase; copper/zinc binding superoxide dismutase 4342839 5749525 Daci_3942 Delftia acidovorans SPH-1 copper/zinc binding superoxide dismutase YP_001564958.1 4342201 D 398578 CDS YP_001564959.1 160899377 5749526 complement(4342851..4343423) 1 NC_010002.1 KEGG: vei:Veis_2563 hypothetical protein; hypothetical protein 4343423 5749526 Daci_3943 Delftia acidovorans SPH-1 hypothetical protein YP_001564959.1 4342851 R 398578 CDS YP_001564960.1 160899378 5749527 4343476..4344123 1 NC_010002.1 KEGG: aav:Aave_2803 pyridoxamine 5'-phosphate oxidase; TIGRFAM: pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; pyridoxamine 5'-phosphate oxidase 4344123 5749527 Daci_3944 Delftia acidovorans SPH-1 pyridoxamine 5'-phosphate oxidase YP_001564960.1 4343476 D 398578 CDS YP_001564961.1 160899379 5749528 complement(4344161..4345264) 1 NC_010002.1 PFAM: Auxin Efflux Carrier; KEGG: aav:Aave_2804 auxin efflux carrier; auxin efflux carrier 4345264 5749528 Daci_3945 Delftia acidovorans SPH-1 auxin efflux carrier YP_001564961.1 4344161 R 398578 CDS YP_001564962.1 160899380 5749529 4345350..4346267 1 NC_010002.1 PFAM: Pirin domain protein; KEGG: bte:BTH_I1747 pirin family protein; pirin domain-containing protein 4346267 5749529 Daci_3946 Delftia acidovorans SPH-1 pirin domain-containing protein YP_001564962.1 4345350 D 398578 CDS YP_001564963.1 160899381 5749530 4346550..4347611 1 NC_010002.1 PFAM: integrase family protein; KEGG: pna:Pnap_4572 phage integrase; integrase family protein 4347611 5749530 Daci_3947 Delftia acidovorans SPH-1 integrase family protein YP_001564963.1 4346550 D 398578 CDS YP_001564964.1 160899382 5749531 complement(4347646..4349838) 1 NC_010002.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ajs:Ajs_2033 TonB-dependent receptor; TonB-dependent receptor 4349838 5749531 Daci_3948 Delftia acidovorans SPH-1 TonB-dependent receptor YP_001564964.1 4347646 R 398578 CDS YP_001564965.1 160899383 5749532 complement(4350079..4350534) 1 NC_010002.1 KEGG: ajs:Ajs_2032 hypothetical protein; hypothetical protein 4350534 5749532 Daci_3949 Delftia acidovorans SPH-1 hypothetical protein YP_001564965.1 4350079 R 398578 CDS YP_001564966.1 160899384 5749533 complement(4350657..4350965) 1 NC_010002.1 KEGG: aav:Aave_2810 hypothetical protein; hypothetical protein 4350965 5749533 Daci_3950 Delftia acidovorans SPH-1 hypothetical protein YP_001564966.1 4350657 R 398578 CDS YP_001564967.1 160899385 5749534 complement(4351017..4351514) 1 NC_010002.1 KEGG: aav:Aave_2813 putative ferric uptake regulator, Fur family; ferric uptake regulator family protein 4351514 5749534 Daci_3951 Delftia acidovorans SPH-1 ferric uptake regulator family protein YP_001564967.1 4351017 R 398578 CDS YP_001564968.1 160899386 5749535 complement(4351629..4352165) 1 NC_010002.1 TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; KEGG: aav:Aave_2814 peptide methionine sulfoxide reductase; peptide methionine sulfoxide reductase 4352165 5749535 Daci_3952 Delftia acidovorans SPH-1 peptide methionine sulfoxide reductase YP_001564968.1 4351629 R 398578 CDS YP_001564969.1 160899387 5749536 4352312..4353010 1 NC_010002.1 PFAM: regulatory protein TetR; KEGG: pna:Pnap_1129 transcriptional regulator, TetR family; TetR family transcriptional regulator 4353010 5749536 Daci_3953 Delftia acidovorans SPH-1 TetR family transcriptional regulator YP_001564969.1 4352312 D 398578 CDS YP_001564970.1 160899388 5749537 4353007..4354248 1 NC_010002.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: vei:Veis_2348 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 4354248 5749537 Daci_3954 Delftia acidovorans SPH-1 RND family efflux transporter MFP subunit YP_001564970.1 4353007 D 398578 CDS YP_001564971.1 160899389 5749538 4354251..4357478 1 NC_010002.1 PFAM: acriflavin resistance protein; KEGG: pol:Bpro_1667 acriflavin resistance protein; acriflavin resistance protein 4357478 5749538 Daci_3955 Delftia acidovorans SPH-1 acriflavin resistance protein YP_001564971.1 4354251 D 398578 CDS YP_001564972.1 160899390 5749539 4357522..4358232 1 NC_010002.1 PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: aav:Aave_2816 methyltransferase type 11; protein-L-isoaspartate(D-aspartate) O-methyltransferase 4358232 5749539 Daci_3956 Delftia acidovorans SPH-1 protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_001564972.1 4357522 D 398578 CDS YP_001564973.1 160899391 5749540 4358310..4358657 1 NC_010002.1 SMART: Rhodanese domain protein; KEGG: ajs:Ajs_2027 rhodanese domain protein; rhodanese domain-containing protein 4358657 5749540 Daci_3957 Delftia acidovorans SPH-1 rhodanese domain-containing protein YP_001564973.1 4358310 D 398578 CDS YP_001564974.1 160899392 5749541 4358748..4360223 1 NC_010002.1 TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: aav:Aave_2818 type I secretion outer membrane protein, TolC family; TolC family type I secretion outer membrane protein 4360223 5749541 Daci_3958 Delftia acidovorans SPH-1 TolC family type I secretion outer membrane protein YP_001564974.1 4358748 D 398578 CDS YP_001564975.1 160899393 5749542 4360594..4361271 1 NC_010002.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ent:Ent638_1861 two component transcriptional regulator, winged helix family; two component transcriptional regulator 4361271 5749542 Daci_3959 Delftia acidovorans SPH-1 two component transcriptional regulator YP_001564975.1 4360594 D 398578 CDS YP_001564976.1 160899394 5749543 4361274..4362695 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ent:Ent638_1862 integral membrane sensor signal transduction histidine kinase; histidine kinase 4362695 5749543 Daci_3960 Delftia acidovorans SPH-1 histidine kinase YP_001564976.1 4361274 D 398578 CDS YP_001564977.1 160899395 5749544 4362787..4363047 1 NC_010002.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: neu:NE2111 hypothetical protein; prevent-host-death family protein 4363047 5749544 Daci_3961 Delftia acidovorans SPH-1 prevent-host-death family protein YP_001564977.1 4362787 D 398578 CDS YP_001564978.1 160899396 5749545 4363059..4363472 1 NC_010002.1 PFAM: PilT protein domain protein; KEGG: neu:NE2112 PIN (PilT N terminus) domain; PilT domain-containing protein 4363472 5749545 Daci_3962 Delftia acidovorans SPH-1 PilT domain-containing protein YP_001564978.1 4363059 D 398578 CDS YP_001564979.1 160899397 5749546 complement(4363530..4364849) 1 NC_010002.1 PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: aav:Aave_2820 three-deoxy-D-manno-octulosonic-acid transferase domain protein; 3-deoxy-D-manno-octulosonic-acid transferase 4364849 5749546 Daci_3963 Delftia acidovorans SPH-1 3-deoxy-D-manno-octulosonic-acid transferase YP_001564979.1 4363530 R 398578 CDS YP_001564980.1 160899398 5749547 complement(4364865..4366253) 1 NC_010002.1 PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: ajs:Ajs_2021 phosphomannomutase; phosphomannomutase 4366253 5749547 Daci_3964 Delftia acidovorans SPH-1 phosphomannomutase YP_001564980.1 4364865 R 398578 CDS YP_001564981.1 160899399 5749548 complement(4366404..4368290) 1 NC_010002.1 catalyzes the formation of propionyl-CoA using propionate as a substrate; PrpE from Ralstonia solanacearum can produce acetyl-, propionyl-, butyryl- and acrylyl-coenzyme A, and Salmonella enterica produces propionyl- and butyryl-coenzyme A; not expressed in Escherichia coli when grown on propionate/minimal media; ATP-dependent; propionyl-CoA synthetase 4368290 prpE 5749548 prpE Delftia acidovorans SPH-1 propionyl-CoA synthetase YP_001564981.1 4366404 R 398578 CDS YP_001564982.1 160899400 5749549 complement(4368406..4369212) 1 NC_010002.1 KEGG: bch:Bcen2424_3201 porin, opacity type; opacity protein and related surface antigens-like protein 4369212 5749549 Daci_3966 Delftia acidovorans SPH-1 opacity protein and related surface antigens-like protein YP_001564982.1 4368406 R 398578 CDS YP_001564983.1 160899401 5749550 complement(4369267..4369869) 1 NC_010002.1 PFAM: isochorismatase hydrolase; KEGG: ajs:Ajs_2015 isochorismatase hydrolase; isochorismatase hydrolase 4369869 5749550 Daci_3967 Delftia acidovorans SPH-1 isochorismatase hydrolase YP_001564983.1 4369267 R 398578 CDS YP_001564984.1 160899402 5749551 4370065..4370700 1 NC_010002.1 PFAM: NLP/P60 protein; KEGG: aav:Aave_2830 NLP/P60 protein; NLP/P60 protein 4370700 5749551 Daci_3968 Delftia acidovorans SPH-1 NLP/P60 protein YP_001564984.1 4370065 D 398578 CDS YP_001564985.1 160899403 5749552 4370863..4371120 1 NC_010002.1 KEGG: aav:Aave_2831 transglycosylase-associated protein; transglycosylase-associated protein 4371120 5749552 Daci_3969 Delftia acidovorans SPH-1 transglycosylase-associated protein YP_001564985.1 4370863 D 398578 CDS YP_001564986.1 160899404 5749553 4371197..4371883 1 NC_010002.1 KEGG: aav:Aave_2832 hypothetical protein; hypothetical protein 4371883 5749553 Daci_3970 Delftia acidovorans SPH-1 hypothetical protein YP_001564986.1 4371197 D 398578 CDS YP_001564987.1 160899405 5749554 complement(4371891..4372730) 1 NC_010002.1 PFAM: Glutathione S-transferase domain; KEGG: pfo:Pfl_2223 glutathione S-transferase family protein; glutathione S-transferase domain-containing protein 4372730 5749554 Daci_3971 Delftia acidovorans SPH-1 glutathione S-transferase domain-containing protein YP_001564987.1 4371891 R 398578 CDS YP_001564988.1 160899406 5749555 4372860..4373348 1 NC_010002.1 PFAM: protein of unknown function DUF55; KEGG: ajs:Ajs_2092 protein of unknown function DUF55; hypothetical protein 4373348 5749555 Daci_3972 Delftia acidovorans SPH-1 hypothetical protein YP_001564988.1 4372860 D 398578 CDS YP_001564989.1 160899407 5749556 4373536..4374561 1 NC_010002.1 KEGG: oan:Oant_0479 hypothetical protein; hypothetical protein 4374561 5749556 Daci_3973 Delftia acidovorans SPH-1 hypothetical protein YP_001564989.1 4373536 D 398578 CDS YP_001564990.1 160899408 5749557 complement(4374562..4375863) 1 NC_010002.1 PFAM: major facilitator superfamily MFS_1; KEGG: art:Arth_1721 major facilitator superfamily MFS_1; major facilitator transporter 4375863 5749557 Daci_3974 Delftia acidovorans SPH-1 major facilitator transporter YP_001564990.1 4374562 R 398578 CDS YP_001564991.1 160899409 5749558 4375961..4376680 1 NC_010002.1 KEGG: bxe:Bxe_C1278 hypothetical protein; hypothetical protein 4376680 5749558 Daci_3975 Delftia acidovorans SPH-1 hypothetical protein YP_001564991.1 4375961 D 398578 CDS YP_001564992.1 160899410 5749559 complement(4376869..4377486) 1 NC_010002.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_C7469 lysine exporter family protein (LysE/YggA); lysine exporter protein LysE/YggA 4377486 5749559 Daci_3976 Delftia acidovorans SPH-1 lysine exporter protein LysE/YggA YP_001564992.1 4376869 R 398578 CDS YP_001564993.1 160899411 5749560 4377552..4378481 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_5693 transcriptional regulator, LysR family; LysR family transcriptional regulator 4378481 5749560 Daci_3977 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001564993.1 4377552 D 398578 CDS YP_001564994.1 160899412 5749561 complement(4378623..4380467) 1 NC_010002.1 TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: biotin/lipoyl attachment domain-containing protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: aav:Aave_2464 dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase 4380467 5749561 Daci_3978 Delftia acidovorans SPH-1 dihydrolipoamide dehydrogenase YP_001564994.1 4378623 R 398578 CDS YP_001564995.1 160899413 5749562 complement(4380483..4382174) 1 NC_010002.1 KEGG: aav:Aave_2463 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 4382174 5749562 Daci_3979 Delftia acidovorans SPH-1 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase YP_001564995.1 4380483 R 398578 CDS YP_001564996.1 160899414 5749563 complement(4382194..4384911) 1 NC_010002.1 E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 4384911 aceE 5749563 aceE Delftia acidovorans SPH-1 pyruvate dehydrogenase subunit E1 YP_001564996.1 4382194 R 398578 CDS YP_001564997.1 160899415 5749564 4385232..4387805 1 NC_010002.1 KEGG: ajs:Ajs_2126 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase 4387805 5749564 Daci_3981 Delftia acidovorans SPH-1 PAS/PAC sensor signal transduction histidine kinase YP_001564997.1 4385232 D 398578 CDS YP_001564998.1 160899416 5749565 4387802..4388452 1 NC_010002.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: ajs:Ajs_2127 response regulator receiver protein; two component LuxR family transcriptional regulator 4388452 5749565 Daci_3982 Delftia acidovorans SPH-1 two component LuxR family transcriptional regulator YP_001564998.1 4387802 D 398578 CDS YP_001564999.1 160899417 5749566 4388537..4389391 1 NC_010002.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 4389391 5749566 Daci_3983 Delftia acidovorans SPH-1 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_001564999.1 4388537 D 398578 CDS YP_001565000.1 160899418 5749567 4389467..4391515 1 NC_010002.1 PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: aav:Aave_2458 oligopeptidase A; oligopeptidase A 4391515 5749567 Daci_3984 Delftia acidovorans SPH-1 oligopeptidase A YP_001565000.1 4389467 D 398578 CDS YP_001565001.1 160899419 5749568 4391627..4392427 1 NC_010002.1 PFAM: glutaredoxin; KEGG: aav:Aave_2457 glutaredoxin; glutaredoxin 4392427 5749568 Daci_3985 Delftia acidovorans SPH-1 glutaredoxin YP_001565001.1 4391627 D 398578 CDS YP_001565002.1 160899420 5749569 4392459..4392842 1 NC_010002.1 hypothetical protein 4392842 5749569 Daci_3986 Delftia acidovorans SPH-1 hypothetical protein YP_001565002.1 4392459 D 398578 CDS YP_001565003.1 160899421 5749570 complement(4392864..4393556) 1 NC_010002.1 Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 4393556 5749570 Daci_3987 Delftia acidovorans SPH-1 ribose-5-phosphate isomerase A YP_001565003.1 4392864 R 398578 CDS YP_001565004.1 160899422 5749571 4393591..4394637 1 NC_010002.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 4394637 5749571 Daci_3988 Delftia acidovorans SPH-1 dihydroorotate dehydrogenase 2 YP_001565004.1 4393591 D 398578 CDS YP_001565005.1 160899423 5749572 complement(4394791..4395162) 1 NC_010002.1 KEGG: ajs:Ajs_2133 hypothetical protein; hypothetical protein 4395162 5749572 Daci_3989 Delftia acidovorans SPH-1 hypothetical protein YP_001565005.1 4394791 R 398578 CDS YP_001565006.1 160899424 5749573 complement(4395165..4395584) 1 NC_010002.1 KEGG: aav:Aave_2453 hypothetical protein; hypothetical protein 4395584 5749573 Daci_3990 Delftia acidovorans SPH-1 hypothetical protein YP_001565006.1 4395165 R 398578 CDS YP_001565007.1 160899425 5749574 complement(4395593..4395904) 1 NC_010002.1 PFAM: protein of unknown function DUF883 ElaB; KEGG: ajs:Ajs_2135 protein of unknown function DUF883, ElaB; hypothetical protein 4395904 5749574 Daci_3991 Delftia acidovorans SPH-1 hypothetical protein YP_001565007.1 4395593 R 398578 CDS YP_001565008.1 160899426 5749575 complement(4396107..4397207) 1 NC_010002.1 PFAM: FAD dependent oxidoreductase; KEGG: ajs:Ajs_2136 FAD dependent oxidoreductase; 2-hydroxyglutarate dehydrogenase 4397207 5749575 Daci_3992 Delftia acidovorans SPH-1 2-hydroxyglutarate dehydrogenase YP_001565008.1 4396107 R 398578 CDS YP_001565009.1 160899427 5749580 complement(4397820..4398536) 1 NC_010002.1 KEGG: vei:Veis_2379 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; DNA polymerase III subunit epsilon 4398536 5749580 Daci_3993 Delftia acidovorans SPH-1 DNA polymerase III subunit epsilon YP_001565009.1 4397820 R 398578 CDS YP_001565010.1 160899428 5749581 complement(4398547..4398885) 1 NC_010002.1 TIGRFAM: ferredoxin, 2Fe-2S type, ISC system; PFAM: ferredoxin; KEGG: ajs:Ajs_2139 ferredoxin, 2Fe-2S type, ISC system; 2Fe-2S type ferredoxin 4398885 5749581 Daci_3994 Delftia acidovorans SPH-1 2Fe-2S type ferredoxin YP_001565010.1 4398547 R 398578 CDS YP_001565011.1 160899429 5749582 complement(4398911..4400779) 1 NC_010002.1 involved in the maturation of iron-sulfur cluster-containing proteins; chaperone protein HscA 4400779 hscA 5749582 hscA Delftia acidovorans SPH-1 chaperone protein HscA YP_001565011.1 4398911 R 398578 CDS YP_001565012.1 160899430 5749583 complement(4400864..4401382) 1 NC_010002.1 TIGRFAM: co-chaperone Hsc20; PFAM: heat shock protein DnaJ domain protein; HSC20 oligomerisation; KEGG: ajs:Ajs_2141 co-chaperone Hsc20; co-chaperone Hsc20 4401382 5749583 Daci_3996 Delftia acidovorans SPH-1 co-chaperone Hsc20 YP_001565012.1 4400864 R 398578 CDS YP_001565013.1 160899431 5749584 complement(4401500..4401823) 1 NC_010002.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; iron-sulfur cluster assembly protein IscA; PFAM: HesB/YadR/YfhF-family protein; KEGG: ajs:Ajs_2142 iron-sulfur cluster assembly protein IscA; iron-sulfur cluster assembly protein IscA 4401823 5749584 Daci_3997 Delftia acidovorans SPH-1 iron-sulfur cluster assembly protein IscA YP_001565013.1 4401500 R 398578 CDS YP_001565014.1 160899432 5749585 complement(4401825..4402223) 1 NC_010002.1 TIGRFAM: FeS cluster assembly scaffold IscU; PFAM: nitrogen-fixing NifU domain protein; KEGG: ajs:Ajs_2143 FeS cluster assembly scaffold IscU; FeS cluster assembly scaffold IscU 4402223 5749585 Daci_3998 Delftia acidovorans SPH-1 FeS cluster assembly scaffold IscU YP_001565014.1 4401825 R 398578 CDS YP_001565015.1 160899433 5749586 complement(4402267..4403487) 1 NC_010002.1 TIGRFAM: cysteine desulfurase IscS; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: vei:Veis_2373 cysteine desulfurase IscS; cysteine desulfurase IscS 4403487 5749586 Daci_3999 Delftia acidovorans SPH-1 cysteine desulfurase IscS YP_001565015.1 4402267 R 398578 CDS YP_001565016.1 160899434 5749587 complement(4403622..4404158) 1 NC_010002.1 TIGRFAM: transcriptional regulator, Rrf2 family; iron-sulfur cluster assembly transcription factor IscR; PFAM: protein of unknown function UPF0074; KEGG: ajs:Ajs_2145 transcriptional regulator, BadM/Rrf2 family; BadM/Rrf2 family transcriptional regulator 4404158 5749587 Daci_4000 Delftia acidovorans SPH-1 BadM/Rrf2 family transcriptional regulator YP_001565016.1 4403622 R 398578 CDS YP_001565017.1 160899435 5749588 complement(4404384..4406522) 1 NC_010002.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 4406522 5749588 Daci_4001 Delftia acidovorans SPH-1 excinuclease ABC subunit B YP_001565017.1 4404384 R 398578 CDS YP_001565018.1 160899436 5749589 4406600..4407796 1 NC_010002.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 4407796 5749589 Daci_4002 Delftia acidovorans SPH-1 aromatic amino acid aminotransferase YP_001565018.1 4406600 D 398578 CDS YP_001565019.1 160899437 5749590 4407990..4408970 1 NC_010002.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: ajs:Ajs_2153 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 4408970 5749590 Daci_4003 Delftia acidovorans SPH-1 L-carnitine dehydratase/bile acid-inducible protein F YP_001565019.1 4407990 D 398578 CDS YP_001565020.1 160899438 5749591 4409303..4411765 1 NC_010002.1 KEGG: pap:PSPA7_4658 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 4411765 5749591 Daci_4004 Delftia acidovorans SPH-1 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_001565020.1 4409303 D 398578 CDS YP_001565021.1 160899439 5749592 complement(4411779..4414274) 1 NC_010002.1 PFAM: Radical SAM domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: ajs:Ajs_2243 radical SAM N-terminal domain protein; radical SAM domain-containing protein 4414274 5749592 Daci_4005 Delftia acidovorans SPH-1 radical SAM domain-containing protein YP_001565021.1 4411779 R 398578 CDS YP_001565022.1 160899440 5749593 complement(4414350..4415342) 1 NC_010002.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bam:Bamb_1077 transcriptional regulator, AraC family; AraC family transcriptional regulator 4415342 5749593 Daci_4006 Delftia acidovorans SPH-1 AraC family transcriptional regulator YP_001565022.1 4414350 R 398578 CDS YP_001565023.1 160899441 5749594 complement(4415410..4415649) 1 NC_010002.1 hypothetical protein 4415649 5749594 Daci_4007 Delftia acidovorans SPH-1 hypothetical protein YP_001565023.1 4415410 R 398578 CDS YP_001565024.1 160899442 5749595 complement(4415646..4417382) 1 NC_010002.1 PFAM: monooxygenase FAD-binding; KEGG: bxe:Bxe_A2727 putative 3-(3-hydroxy-phenyl)propionate hydroxylase (MhpA); monooxygenase FAD-binding 4417382 5749595 Daci_4008 Delftia acidovorans SPH-1 monooxygenase FAD-binding YP_001565024.1 4415646 R 398578 CDS YP_001565025.1 160899443 5749596 complement(4417484..4418350) 1 NC_010002.1 PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; KEGG: bxe:Bxe_B1220 transcriptional regulator, LuxR family; LuxR family transcriptional regulator 4418350 5749596 Daci_4009 Delftia acidovorans SPH-1 LuxR family transcriptional regulator YP_001565025.1 4417484 R 398578 CDS YP_001565026.1 160899444 5749597 complement(4418575..4418745) 1 NC_010002.1 hypothetical protein 4418745 5749597 Daci_4010 Delftia acidovorans SPH-1 hypothetical protein YP_001565026.1 4418575 R 398578 CDS YP_001565027.1 160899445 5749598 4418885..4419541 1 NC_010002.1 PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: ajs:Ajs_2244 protein of unknown function UPF0029; hypothetical protein 4419541 5749598 Daci_4011 Delftia acidovorans SPH-1 hypothetical protein YP_001565027.1 4418885 D 398578 CDS YP_001565028.1 160899446 5749599 complement(4419563..4420741) 1 NC_010002.1 KEGG: pol:Bpro_4523 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 4420741 5749599 Daci_4012 Delftia acidovorans SPH-1 amidohydrolase YP_001565028.1 4419563 R 398578 CDS YP_001565029.1 160899447 5749600 complement(4420752..4421738) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: pol:Bpro_4524 uncharacterized protein UPF0065; hypothetical protein 4421738 5749600 Daci_4013 Delftia acidovorans SPH-1 hypothetical protein YP_001565029.1 4420752 R 398578 CDS YP_001565030.1 160899448 5749601 4421870..4422820 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_B0607 transcriptional regulator, LysR-family; LysR family transcriptional regulator 4422820 5749601 Daci_4014 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001565030.1 4421870 D 398578 CDS YP_001565031.1 160899449 5749602 complement(4423372..4423635) 1 NC_010002.1 hypothetical protein 4423635 5749602 Daci_4015 Delftia acidovorans SPH-1 hypothetical protein YP_001565031.1 4423372 R 398578 CDS YP_001565032.1 160899450 5749603 complement(4423676..4424890) 1 NC_010002.1 KEGG: afw:Anae109_1986 extracellular HAF; hypothetical protein 4424890 5749603 Daci_4016 Delftia acidovorans SPH-1 hypothetical protein YP_001565032.1 4423676 R 398578 CDS YP_001565033.1 160899451 5749604 4425440..4425679 1 NC_010002.1 hypothetical protein 4425679 5749604 Daci_4017 Delftia acidovorans SPH-1 hypothetical protein YP_001565033.1 4425440 D 398578 CDS YP_001565034.1 160899452 5749605 4425917..4427341 1 NC_010002.1 Catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 4427341 5749605 Daci_4018 Delftia acidovorans SPH-1 dihydrolipoamide dehydrogenase YP_001565034.1 4425917 D 398578 CDS YP_001565035.1 160899453 5749606 complement(4427366..4429186) 1 NC_010002.1 PFAM: ABC transporter related; SbmABacA family protein; ABC transporter domain protein; SMART: AAA ATPase; KEGG: pen:PSEEN1831 ABC efflux transporter, permease/ATP-binding protein; ABC transporter 4429186 5749606 Daci_4019 Delftia acidovorans SPH-1 ABC transporter YP_001565035.1 4427366 R 398578 CDS YP_001565036.1 160899454 5749607 4429396..4431318 1 NC_010002.1 PFAM: K potassium transporter; KEGG: rfr:Rfer_2539 K+ potassium transporter; K potassium transporter 4431318 5749607 Daci_4020 Delftia acidovorans SPH-1 K potassium transporter YP_001565036.1 4429396 D 398578 CDS YP_001565037.1 160899455 5749608 complement(4431332..4432006) 1 NC_010002.1 KEGG: azo:azo2926 conserved hypothetical secreted protein; hypothetical protein 4432006 5749608 Daci_4021 Delftia acidovorans SPH-1 hypothetical protein YP_001565037.1 4431332 R 398578 CDS YP_001565038.1 160899456 5749609 4432328..4432939 1 NC_010002.1 PFAM: Chromate transporter; KEGG: ajs:Ajs_2259 chromate transporter; chromate transporter 4432939 5749609 Daci_4022 Delftia acidovorans SPH-1 chromate transporter YP_001565038.1 4432328 D 398578 CDS YP_001565039.1 160899457 5749610 4432936..4433544 1 NC_010002.1 PFAM: Chromate transporter; KEGG: ajs:Ajs_2260 chromate transporter; chromate transporter 4433544 5749610 Daci_4023 Delftia acidovorans SPH-1 chromate transporter YP_001565039.1 4432936 D 398578 CDS YP_001565040.1 160899458 5749611 4433591..4434571 1 NC_010002.1 PFAM: aldo/keto reductase; KEGG: aav:Aave_3016 aldo/keto reductase; aldo/keto reductase 4434571 5749611 Daci_4024 Delftia acidovorans SPH-1 aldo/keto reductase YP_001565040.1 4433591 D 398578 CDS YP_001565041.1 160899459 5749612 complement(4434616..4435470) 1 NC_010002.1 PFAM: Silent information regulator protein Sir2; KEGG: ajs:Ajs_2262 silent information regulator protein Sir2; silent information regulator protein Sir2 4435470 5749612 Daci_4025 Delftia acidovorans SPH-1 silent information regulator protein Sir2 YP_001565041.1 4434616 R 398578 CDS YP_001565042.1 160899460 5749613 complement(4435470..4436174) 1 NC_010002.1 PFAM: regulatory protein TetR; KEGG: rso:RS03880 putative transcription regulator protein; TetR family transcriptional regulator 4436174 5749613 Daci_4026 Delftia acidovorans SPH-1 TetR family transcriptional regulator YP_001565042.1 4435470 R 398578 CDS YP_001565043.1 160899461 5749614 4436344..4436847 1 NC_010002.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: bbr:BB4023 hypothetical protein; 3-demethylubiquinone-9 3-methyltransferase 4436847 5749614 Daci_4027 Delftia acidovorans SPH-1 3-demethylubiquinone-9 3-methyltransferase YP_001565043.1 4436344 D 398578 CDS YP_001565044.1 160899462 5749615 4436918..4437340 1 NC_010002.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 3-demethylubiquinone-9 3-methyltransferase; KEGG: ajs:Ajs_2265 3-demethylubiquinone-9 3-methyltransferase; 3-demethylubiquinone-9 3-methyltransferase 4437340 5749615 Daci_4028 Delftia acidovorans SPH-1 3-demethylubiquinone-9 3-methyltransferase YP_001565044.1 4436918 D 398578 CDS YP_001565045.1 160899463 5749616 4437419..4437805 1 NC_010002.1 KEGG: vco:VC0395_0589 hypothetical protein; hypothetical protein 4437805 5749616 Daci_4029 Delftia acidovorans SPH-1 hypothetical protein YP_001565045.1 4437419 D 398578 CDS YP_001565046.1 160899464 5749617 4437814..4438290 1 NC_010002.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: swi:Swit_1108 activator of HSP90 ATPase 1 family protein; activator of Hsp90 ATPase 1 family protein 4438290 5749617 Daci_4030 Delftia acidovorans SPH-1 activator of Hsp90 ATPase 1 family protein YP_001565046.1 4437814 D 398578 CDS YP_001565047.1 160899465 5749618 4438316..4438717 1 NC_010002.1 PFAM: protein of unknown function DUF1428; KEGG: rpe:RPE_4844 protein of unknown function DUF1428; hypothetical protein 4438717 5749618 Daci_4031 Delftia acidovorans SPH-1 hypothetical protein YP_001565047.1 4438316 D 398578 CDS YP_001565048.1 160899466 5749619 complement(4438714..4439505) 1 NC_010002.1 TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: aav:Aave_3018 RNA methyltransferase, TrmH family, group 3; RNA methyltransferase 4439505 5749619 Daci_4032 Delftia acidovorans SPH-1 RNA methyltransferase YP_001565048.1 4438714 R 398578 CDS YP_001565049.1 160899467 5749620 4439711..4440946 1 NC_010002.1 involved in the import of serine and threonine coupled with the import of sodium; serine/threonine transporter SstT 4440946 5749620 Daci_4033 Delftia acidovorans SPH-1 serine/threonine transporter SstT YP_001565049.1 4439711 D 398578 CDS YP_001565050.1 160899468 5749621 complement(4440971..4441681) 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_2270 ABC transporter related; ABC transporter-like protein 4441681 5749621 Daci_4034 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001565050.1 4440971 R 398578 CDS YP_001565051.1 160899469 5749622 4441719..4442363 1 NC_010002.1 PFAM: lipolytic protein G-D-S-L family; KEGG: ajs:Ajs_2271 lipolytic enzyme, G-D-S-L family; arylesterase 4442363 5749622 Daci_4035 Delftia acidovorans SPH-1 arylesterase YP_001565051.1 4441719 D 398578 CDS YP_001565052.1 160899470 5749623 complement(4442633..4443442) 1 NC_010002.1 KEGG: vei:Veis_3410 integral membrane protein; integral membrane protein 4443442 5749623 Daci_4036 Delftia acidovorans SPH-1 integral membrane protein YP_001565052.1 4442633 R 398578 CDS YP_001565053.1 160899471 5749624 complement(4443555..4445306) 1 NC_010002.1 KEGG: ajs:Ajs_3582 alkaline phosphatase; alkaline phosphatase 4445306 5749624 Daci_4037 Delftia acidovorans SPH-1 alkaline phosphatase YP_001565053.1 4443555 R 398578 CDS YP_001565054.1 160899472 5749625 complement(4445405..4446673) 1 NC_010002.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: ajs:Ajs_2273 Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; Cys/Met metabolism pyridoxal-phosphate-dependent protein 4446673 5749625 Daci_4038 Delftia acidovorans SPH-1 Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_001565054.1 4445405 R 398578 CDS YP_001565055.1 160899473 5749626 complement(4446734..4447204) 1 NC_010002.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: pol:Bpro_0874 transport-associated; transport-associated protein 4447204 5749626 Daci_4039 Delftia acidovorans SPH-1 transport-associated protein YP_001565055.1 4446734 R 398578 CDS YP_001565056.1 160899474 5749627 4447340..4449100 1 NC_010002.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: ajs:Ajs_2275 sulphate transporter; sulfate transporter 4449100 5749627 Daci_4040 Delftia acidovorans SPH-1 sulfate transporter YP_001565056.1 4447340 D 398578 CDS YP_001565057.1 160899475 5749628 4449066..4449914 1 NC_010002.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: aav:Aave_3024 diguanylate cyclase; diguanylate cyclase 4449914 5749628 Daci_4041 Delftia acidovorans SPH-1 diguanylate cyclase YP_001565057.1 4449066 D 398578 CDS YP_001565058.1 160899476 5749629 4449886..4450770 1 NC_010002.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: aav:Aave_3025 cobyrinic acid a,c-diamide synthase; cobyrinic acid ac-diamide synthase 4450770 5749629 Daci_4042 Delftia acidovorans SPH-1 cobyrinic acid ac-diamide synthase YP_001565058.1 4449886 D 398578 CDS YP_001565059.1 160899477 5749630 4450836..4451627 1 NC_010002.1 SMART: Rhodanese domain protein; KEGG: aav:Aave_3026 rhodanese domain protein; rhodanese domain-containing protein 4451627 5749630 Daci_4043 Delftia acidovorans SPH-1 rhodanese domain-containing protein YP_001565059.1 4450836 D 398578 CDS YP_001565060.1 160899478 5749631 complement(4451624..4452238) 1 NC_010002.1 PFAM: flavodoxin/nitric oxide synthase; KEGG: vei:Veis_4981 flavodoxin/nitric oxide synthase; flavodoxin/nitric oxide synthase 4452238 5749631 Daci_4044 Delftia acidovorans SPH-1 flavodoxin/nitric oxide synthase YP_001565060.1 4451624 R 398578 CDS YP_001565061.1 160899479 5749632 complement(4452339..4452746) 1 NC_010002.1 PFAM: DoxX family protein; KEGG: ajs:Ajs_1986 DoxX family protein; DoxX family protein 4452746 5749632 Daci_4045 Delftia acidovorans SPH-1 DoxX family protein YP_001565061.1 4452339 R 398578 CDS YP_001565062.1 160899480 5749633 complement(4452791..4453492) 1 NC_010002.1 PFAM: Pirin domain protein; Cupin 2 conserved barrel domain protein; KEGG: ajs:Ajs_1985 pirin domain protein domain protein; pirin domain-containing protein 4453492 5749633 Daci_4046 Delftia acidovorans SPH-1 pirin domain-containing protein YP_001565062.1 4452791 R 398578 CDS YP_001565063.1 160899481 5749634 4453626..4454564 1 NC_010002.1 PFAM: regulatory protein LysR; helix-turn-helix Fis-type; LysR substrate-binding; KEGG: aav:Aave_3030 transcriptional regulator, LysR family; LysR family transcriptional regulator 4454564 5749634 Daci_4047 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001565063.1 4453626 D 398578 CDS YP_001565064.1 160899482 5749635 4454603..4455826 1 NC_010002.1 PFAM: FAD dependent oxidoreductase; KEGG: aav:Aave_3031 FAD dependent oxidoreductase; FAD dependent oxidoreductase 4455826 5749635 Daci_4048 Delftia acidovorans SPH-1 FAD dependent oxidoreductase YP_001565064.1 4454603 D 398578 CDS YP_001565065.1 160899483 5749636 4455882..4456820 1 NC_010002.1 PFAM: glutamyl-tRNA synthetase class Ic; KEGG: ajs:Ajs_1982 glutamate--tRNA ligase; glutamate--tRNA ligase 4456820 5749636 Daci_4049 Delftia acidovorans SPH-1 glutamate--tRNA ligase YP_001565065.1 4455882 D 398578 CDS YP_001565066.1 160899484 5749637 4456861..4457640 1 NC_010002.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 4457640 trmB 5749637 trmB Delftia acidovorans SPH-1 tRNA (guanine-N(7)-)-methyltransferase YP_001565066.1 4456861 D 398578 CDS YP_001565067.1 160899485 5749638 4457627..4458697 1 NC_010002.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: aav:Aave_3034 diguanylate cyclase; diguanylate cyclase 4458697 5749638 Daci_4051 Delftia acidovorans SPH-1 diguanylate cyclase YP_001565067.1 4457627 D 398578 CDS YP_001565068.1 160899486 5749639 complement(4458720..4459970) 1 NC_010002.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: dar:Daro_2880 GGDEF; diguanylate cyclase 4459970 5749639 Daci_4052 Delftia acidovorans SPH-1 diguanylate cyclase YP_001565068.1 4458720 R 398578 CDS YP_001565069.1 160899487 5749640 complement(4459980..4461143) 1 NC_010002.1 KEGG: dar:Daro_2881 periplasmic sugar-binding protein, putative; periplasmic sugar-binding protein 4461143 5749640 Daci_4053 Delftia acidovorans SPH-1 periplasmic sugar-binding protein YP_001565069.1 4459980 R 398578 CDS YP_001565070.1 160899488 5749641 complement(4461160..4463784) 1 NC_010002.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 4463784 alaS 5749641 alaS Delftia acidovorans SPH-1 alanyl-tRNA synthetase YP_001565070.1 4461160 R 398578 CDS YP_001565071.1 160899489 5749642 4464220..4464579 1 NC_010002.1 hypothetical protein 4464579 5749642 Daci_4055 Delftia acidovorans SPH-1 hypothetical protein YP_001565071.1 4464220 D 398578 CDS YP_001565072.1 160899490 5749643 complement(4464637..4465974) 1 NC_010002.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: aav:Aave_2224 major facilitator superfamily MFS_1; major facilitator transporter 4465974 5749643 Daci_4056 Delftia acidovorans SPH-1 major facilitator transporter YP_001565072.1 4464637 R 398578 CDS YP_001565073.1 160899491 5749644 4466273..4467319 1 NC_010002.1 TIGRFAM: ubiquinol oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; COX aromatic rich domain protein; KEGG: aav:Aave_2223 ubiquinol oxidase, subunit II; ubiquinol oxidase subunit II 4467319 5749644 Daci_4057 Delftia acidovorans SPH-1 ubiquinol oxidase subunit II YP_001565073.1 4466273 D 398578 CDS YP_001565074.1 160899492 5749645 4467455..4469392 1 NC_010002.1 KEGG: ajs:Ajs_2776 cytochrome-c oxidase; TIGRFAM: cytochrome o ubiquinol oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; cytochrome o ubiquinol oxidase subunit I 4469392 5749645 Daci_4058 Delftia acidovorans SPH-1 cytochrome o ubiquinol oxidase subunit I YP_001565074.1 4467455 D 398578 CDS YP_001565075.1 160899493 5749646 4469385..4470017 1 NC_010002.1 TIGRFAM: cytochrome o ubiquinol oxidase, subunit III; PFAM: cytochrome c oxidase subunit III; KEGG: aav:Aave_2221 cytochrome c oxidase, subunit III; cytochrome o ubiquinol oxidase subunit III 4470017 5749646 Daci_4059 Delftia acidovorans SPH-1 cytochrome o ubiquinol oxidase subunit III YP_001565075.1 4469385 D 398578 CDS YP_001565076.1 160899494 5749647 4470018..4470458 1 NC_010002.1 TIGRFAM: cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV; KEGG: aav:Aave_2220 cytochrome c oxidase subunit IV; cytochrome o ubiquinol oxidase subunit IV 4470458 5749647 Daci_4060 Delftia acidovorans SPH-1 cytochrome o ubiquinol oxidase subunit IV YP_001565076.1 4470018 D 398578 CDS YP_001565077.1 160899495 5749648 4470530..4471243 1 NC_010002.1 PFAM: Surfeit locus 1 family protein; KEGG: aav:Aave_2219 surfeit locus 1 family protein; surfeit locus 1 family protein 4471243 5749648 Daci_4061 Delftia acidovorans SPH-1 surfeit locus 1 family protein YP_001565077.1 4470530 D 398578 CDS YP_001565078.1 160899496 5749649 4471357..4472658 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mpt:Mpe_A1739 two-component sensor histidine kinase; histidine kinase 4472658 5749649 Daci_4062 Delftia acidovorans SPH-1 histidine kinase YP_001565078.1 4471357 D 398578 CDS YP_001565079.1 160899497 5749650 4472688..4473224 1 NC_010002.1 PFAM: response regulator receiver; helix-turn-helix Fis-type; KEGG: mpt:Mpe_A1738 two-component response regulator; two component Fis family transcriptional regulator 4473224 5749650 Daci_4063 Delftia acidovorans SPH-1 two component Fis family transcriptional regulator YP_001565079.1 4472688 D 398578 CDS YP_001565080.1 160899498 5749651 complement(4473305..4474210) 1 NC_010002.1 converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 4474210 5749651 Daci_4064 Delftia acidovorans SPH-1 protoheme IX farnesyltransferase YP_001565080.1 4473305 R 398578 CDS YP_001565081.1 160899499 5749652 complement(4474207..4475727) 1 NC_010002.1 PFAM: cytochrome oxidase assembly; KEGG: aav:Aave_3900 cytochrome oxidase assembly; cytochrome oxidase assembly 4475727 5749652 Daci_4065 Delftia acidovorans SPH-1 cytochrome oxidase assembly YP_001565081.1 4474207 R 398578 CDS YP_001565082.1 160899500 5749653 4476241..4476636 1 NC_010002.1 hypothetical protein 4476636 5749653 Daci_4066 Delftia acidovorans SPH-1 hypothetical protein YP_001565082.1 4476241 D 398578 CDS YP_001565083.1 160899501 5749654 4476770..4476970 1 NC_010002.1 hypothetical protein 4476970 5749654 Daci_4067 Delftia acidovorans SPH-1 hypothetical protein YP_001565083.1 4476770 D 398578 CDS YP_001565084.1 160899502 5749655 4476967..4477233 1 NC_010002.1 hypothetical protein 4477233 5749655 Daci_4068 Delftia acidovorans SPH-1 hypothetical protein YP_001565084.1 4476967 D 398578 CDS YP_001565085.1 160899503 5749656 4477385..4477666 1 NC_010002.1 hypothetical protein 4477666 5749656 Daci_4069 Delftia acidovorans SPH-1 hypothetical protein YP_001565085.1 4477385 D 398578 CDS YP_001565086.1 160899504 5749657 complement(4477705..4478493) 1 NC_010002.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pae:PA2650 hypothetical protein; type 11 methyltransferase 4478493 5749657 Daci_4070 Delftia acidovorans SPH-1 type 11 methyltransferase YP_001565086.1 4477705 R 398578 CDS YP_001565087.1 160899505 5749658 complement(4479518..4479805) 1 NC_010002.1 PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: ajs:Ajs_1144 histone family protein nucleoid-structuring protein H-NS; histone family protein nucleoid-structuring protein H-NS 4479805 5749658 Daci_4071 Delftia acidovorans SPH-1 histone family protein nucleoid-structuring protein H-NS YP_001565087.1 4479518 R 398578 CDS YP_001565088.1 160899506 5749659 4479940..4480191 1 NC_010002.1 PFAM: protein of unknown function DUF333; KEGG: sbl:Sbal_4226 protein of unknown function DUF333; hypothetical protein 4480191 5749659 Daci_4072 Delftia acidovorans SPH-1 hypothetical protein YP_001565088.1 4479940 D 398578 CDS YP_001565089.1 160899507 5749660 complement(4481513..4482052) 1 NC_010002.1 KEGG: pol:Bpro_5208 protein of unknown function DUF159; hypothetical protein 4482052 5749660 Daci_4073 Delftia acidovorans SPH-1 hypothetical protein YP_001565089.1 4481513 R 398578 CDS YP_001565090.1 160899508 5749661 4482605..4482991 1 NC_010002.1 hypothetical protein 4482991 5749661 Daci_4074 Delftia acidovorans SPH-1 hypothetical protein YP_001565090.1 4482605 D 398578 CDS YP_001565091.1 160899509 5749662 complement(4483010..4483285) 1 NC_010002.1 KEGG: aav:Aave_1637 hypothetical protein; hypothetical protein 4483285 5749662 Daci_4075 Delftia acidovorans SPH-1 hypothetical protein YP_001565091.1 4483010 R 398578 CDS YP_001565092.1 160899510 5749663 complement(4483282..4483650) 1 NC_010002.1 KEGG: aav:Aave_1790 hypothetical protein; hypothetical protein 4483650 5749663 Daci_4076 Delftia acidovorans SPH-1 hypothetical protein YP_001565092.1 4483282 R 398578 CDS YP_001565093.1 160899511 5749664 complement(4483653..4484129) 1 NC_010002.1 PFAM: protein of unknown function DUF847; KEGG: bvi:Bcep1808_1188 protein of unknown function DUF847; hypothetical protein 4484129 5749664 Daci_4077 Delftia acidovorans SPH-1 hypothetical protein YP_001565093.1 4483653 R 398578 CDS YP_001565094.1 160899512 5749665 complement(4484421..4484819) 1 NC_010002.1 hypothetical protein 4484819 5749665 Daci_4078 Delftia acidovorans SPH-1 hypothetical protein YP_001565094.1 4484421 R 398578 CDS YP_001565095.1 160899513 5749666 complement(4484889..4485596) 1 NC_010002.1 hypothetical protein 4485596 5749666 Daci_4079 Delftia acidovorans SPH-1 hypothetical protein YP_001565095.1 4484889 R 398578 CDS YP_001565096.1 160899514 5749667 complement(4486261..4489635) 1 NC_010002.1 KEGG: nwi:Nwi_0792 gene transfer agent (GTA) like protein; hypothetical protein 4489635 5749667 Daci_4080 Delftia acidovorans SPH-1 hypothetical protein YP_001565096.1 4486261 R 398578 CDS YP_001565097.1 160899515 5749668 complement(4489983..4490393) 1 NC_010002.1 PFAM: NLP/P60 protein; KEGG: sit:TM1040_1071 putative phage cell wall peptidase, NlpC/P60; NLP/P60 protein 4490393 5749668 Daci_4081 Delftia acidovorans SPH-1 NLP/P60 protein YP_001565097.1 4489983 R 398578 CDS YP_001565098.1 160899516 5749669 complement(4490390..4491319) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: nwi:Nwi_1179 hypothetical protein; hypothetical protein 4491319 5749669 Daci_4082 Delftia acidovorans SPH-1 hypothetical protein YP_001565098.1 4490390 R 398578 CDS YP_001565099.1 160899517 5749670 complement(4491322..4491909) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: rsq:Rsph17025_1086 hypothetical protein; hypothetical protein 4491909 5749670 Daci_4083 Delftia acidovorans SPH-1 hypothetical protein YP_001565099.1 4491322 R 398578 CDS YP_001565100.1 160899518 5749671 complement(4491906..4495661) 1 NC_010002.1 TIGRFAM: phage tail tape measure protein, lambda family; phage tape measure protein; PFAM: Tape measure domain; KEGG: esa:ESA_01039 hypothetical protein; lambda family phage tail tape measure protein 4495661 5749671 Daci_4084 Delftia acidovorans SPH-1 lambda family phage tail tape measure protein YP_001565100.1 4491906 R 398578 CDS YP_001565101.1 160899519 5749672 complement(4496232..4496546) 1 NC_010002.1 PFAM: Protein of unknown function DUF1799 phage-related; KEGG: aav:Aave_1781 hypothetical protein; hypothetical protein 4496546 5749672 Daci_4085 Delftia acidovorans SPH-1 hypothetical protein YP_001565101.1 4496232 R 398578 CDS YP_001565102.1 160899520 5749673 complement(4496546..4497019) 1 NC_010002.1 PFAM: Domain of unknown function DUF1789; KEGG: aav:Aave_1626 hypothetical protein; hypothetical protein 4497019 5749673 Daci_4086 Delftia acidovorans SPH-1 hypothetical protein YP_001565102.1 4496546 R 398578 CDS YP_001565103.1 160899521 5749674 complement(4497133..4497786) 1 NC_010002.1 PFAM: tail protein 3; KEGG: psb:Psyr_2783 hypothetical protein; tail protein 3 4497786 5749674 Daci_4087 Delftia acidovorans SPH-1 tail protein 3 YP_001565103.1 4497133 R 398578 CDS YP_001565104.1 160899522 5749675 complement(4497877..4498302) 1 NC_010002.1 KEGG: mlo:mlr8015 hypothetical protein; hypothetical protein 4498302 5749675 Daci_4088 Delftia acidovorans SPH-1 hypothetical protein YP_001565104.1 4497877 R 398578 CDS YP_001565105.1 160899523 5749676 complement(4498299..4498745) 1 NC_010002.1 KEGG: xau:Xaut_3707 hypothetical protein; hypothetical protein 4498745 5749676 Daci_4089 Delftia acidovorans SPH-1 hypothetical protein YP_001565105.1 4498299 R 398578 CDS YP_001565106.1 160899524 5749677 complement(4498745..4499806) 1 NC_010002.1 KEGG: mes:Meso_1223 hypothetical protein; hypothetical protein 4499806 5749677 Daci_4090 Delftia acidovorans SPH-1 hypothetical protein YP_001565106.1 4498745 R 398578 CDS YP_001565107.1 160899525 5749678 complement(4499809..4500198) 1 NC_010002.1 KEGG: xau:Xaut_3713 hypothetical protein; hypothetical protein 4500198 5749678 Daci_4091 Delftia acidovorans SPH-1 hypothetical protein YP_001565107.1 4499809 R 398578 CDS YP_001565108.1 160899526 5749679 complement(4500199..4500744) 1 NC_010002.1 PFAM: Pathogenesis-related transcriptional factor and ERF protein; KEGG: bvi:Bcep1808_4543 HNH endonuclease; pathogenesis-like transcriptional factor and ERF protein 4500744 5749679 Daci_4092 Delftia acidovorans SPH-1 pathogenesis-like transcriptional factor and ERF protein YP_001565108.1 4500199 R 398578 CDS YP_001565109.1 160899527 5749680 complement(4500849..4501346) 1 NC_010002.1 KEGG: mlo:mlr8011 hypothetical protein; hypothetical protein 4501346 5749680 Daci_4093 Delftia acidovorans SPH-1 hypothetical protein YP_001565109.1 4500849 R 398578 CDS YP_001565110.1 160899528 5749681 complement(4501349..4501582) 1 NC_010002.1 hypothetical protein 4501582 5749681 Daci_4094 Delftia acidovorans SPH-1 hypothetical protein YP_001565110.1 4501349 R 398578 CDS YP_001565111.1 160899529 5749682 complement(4501668..4502648) 1 NC_010002.1 KEGG: gbe:GbCGDNIH1_1579 hypothetical protein; hypothetical protein 4502648 5749682 Daci_4095 Delftia acidovorans SPH-1 hypothetical protein YP_001565111.1 4501668 R 398578 CDS YP_001565112.1 160899530 5749683 complement(4502652..4503131) 1 NC_010002.1 hypothetical protein 4503131 5749683 Daci_4096 Delftia acidovorans SPH-1 hypothetical protein YP_001565112.1 4502652 R 398578 CDS YP_001565113.1 160899531 5749684 complement(4503147..4504283) 1 NC_010002.1 KEGG: mes:Meso_1215 hypothetical protein; hypothetical protein 4504283 5749684 Daci_4097 Delftia acidovorans SPH-1 hypothetical protein YP_001565113.1 4503147 R 398578 CDS YP_001565114.1 160899532 5749685 complement(4504280..4505638) 1 NC_010002.1 TIGRFAM: phage-associated protein, HI1409 family; PFAM: conserved hypothetical protein; KEGG: mlo:mlr8004 hypothetical protein; phage-associated protein 4505638 5749685 Daci_4098 Delftia acidovorans SPH-1 phage-associated protein YP_001565114.1 4504280 R 398578 CDS YP_001565115.1 160899533 5749686 complement(4505638..4506882) 1 NC_010002.1 TIGRFAM: phage terminase, large subunit, PBSX family; PFAM: terminase large subunit; KEGG: par:Psyc_1001 phage terminase, large subunit, PBSX family; PBSX family phage terminase large subunit 4506882 5749686 Daci_4099 Delftia acidovorans SPH-1 PBSX family phage terminase large subunit YP_001565115.1 4505638 R 398578 CDS YP_001565116.1 160899534 5749687 complement(4506863..4507495) 1 NC_010002.1 PFAM: Terminase small subunit; KEGG: sit:TM1040_0800 terminase small subunit; terminase small subunit 4507495 5749687 Daci_4100 Delftia acidovorans SPH-1 terminase small subunit YP_001565116.1 4506863 R 398578 CDS YP_001565117.1 160899535 5749688 complement(4507992..4508450) 1 NC_010002.1 KEGG: aav:Aave_1764 hypothetical protein; hypothetical protein 4508450 5749688 Daci_4101 Delftia acidovorans SPH-1 hypothetical protein YP_001565117.1 4507992 R 398578 CDS YP_001565118.1 160899536 5749689 complement(4508467..4509042) 1 NC_010002.1 PFAM: Lambda NinG family protein; KEGG: pfl:PFL_3773 NinG protein; lambda NinG family protein 4509042 5749689 Daci_4102 Delftia acidovorans SPH-1 lambda NinG family protein YP_001565118.1 4508467 R 398578 CDS YP_001565119.1 160899537 5749690 complement(4509368..4509706) 1 NC_010002.1 KEGG: sit:TM1040_1689 hypothetical protein; hypothetical protein 4509706 5749690 Daci_4103 Delftia acidovorans SPH-1 hypothetical protein YP_001565119.1 4509368 R 398578 CDS YP_001565120.1 160899538 5749691 complement(4509699..4509896) 1 NC_010002.1 hypothetical protein 4509896 5749691 Daci_4104 Delftia acidovorans SPH-1 hypothetical protein YP_001565120.1 4509699 R 398578 CDS YP_001565121.1 160899539 5749692 complement(4509893..4510141) 1 NC_010002.1 hypothetical protein 4510141 5749692 Daci_4105 Delftia acidovorans SPH-1 hypothetical protein YP_001565121.1 4509893 R 398578 CDS YP_001565122.1 160899540 5749693 complement(4510317..4510676) 1 NC_010002.1 hypothetical protein 4510676 5749693 Daci_4106 Delftia acidovorans SPH-1 hypothetical protein YP_001565122.1 4510317 R 398578 CDS YP_001565123.1 160899541 5749694 complement(4510673..4511182) 1 NC_010002.1 hypothetical protein 4511182 5749694 Daci_4107 Delftia acidovorans SPH-1 hypothetical protein YP_001565123.1 4510673 R 398578 CDS YP_001565124.1 160899542 5749695 complement(4511179..4511481) 1 NC_010002.1 hypothetical protein 4511481 5749695 Daci_4108 Delftia acidovorans SPH-1 hypothetical protein YP_001565124.1 4511179 R 398578 CDS YP_001565125.1 160899543 5749696 complement(4511780..4512463) 1 NC_010002.1 KEGG: bbr:BB1686 hypothetical protein; hypothetical protein 4512463 5749696 Daci_4109 Delftia acidovorans SPH-1 hypothetical protein YP_001565125.1 4511780 R 398578 CDS YP_001565126.1 160899544 5749697 complement(4512519..4513883) 1 NC_010002.1 PFAM: DnaB domain protein helicase domain protein; KEGG: bvi:Bcep1808_1163 DnaB domain protein helicase, C-terminal domain protein; DnaB domain-containing protein 4513883 5749697 Daci_4110 Delftia acidovorans SPH-1 DnaB domain-containing protein YP_001565126.1 4512519 R 398578 CDS YP_001565127.1 160899545 5749698 complement(4513876..4514781) 1 NC_010002.1 KEGG: ajs:Ajs_0930 hypothetical protein; hypothetical protein 4514781 5749698 Daci_4111 Delftia acidovorans SPH-1 hypothetical protein YP_001565127.1 4513876 R 398578 CDS YP_001565128.1 160899546 5749699 complement(4516060..4516359) 1 NC_010002.1 hypothetical protein 4516359 5749699 Daci_4112 Delftia acidovorans SPH-1 hypothetical protein YP_001565128.1 4516060 R 398578 CDS YP_001565129.1 160899547 5749700 4516397..4517047 1 NC_010002.1 PFAM: peptidase S24 and S26 domain protein; KEGG: bpd:BURPS668_A2366 helix-turn-helix motif:peptidase S24, S26A and S26B; putative phage repressor 4517047 5749700 Daci_4113 Delftia acidovorans SPH-1 putative phage repressor YP_001565129.1 4516397 D 398578 CDS YP_001565130.1 160899548 5749701 4517062..4517649 1 NC_010002.1 hypothetical protein 4517649 5749701 Daci_4114 Delftia acidovorans SPH-1 hypothetical protein YP_001565130.1 4517062 D 398578 CDS YP_001565131.1 160899549 5749702 4517670..4518101 1 NC_010002.1 KEGG: bbr:BB1705 phage-related putative exported protein; hypothetical protein 4518101 5749702 Daci_4115 Delftia acidovorans SPH-1 hypothetical protein YP_001565131.1 4517670 D 398578 CDS YP_001565132.1 160899550 5749703 4520302..4520643 1 NC_010002.1 hypothetical protein 4520643 5749703 Daci_4116 Delftia acidovorans SPH-1 hypothetical protein YP_001565132.1 4520302 D 398578 CDS YP_001565133.1 160899551 5749704 4520726..4520971 1 NC_010002.1 hypothetical protein 4520971 5749704 Daci_4117 Delftia acidovorans SPH-1 hypothetical protein YP_001565133.1 4520726 D 398578 CDS YP_001565134.1 160899552 5749705 4521015..4521236 1 NC_010002.1 hypothetical protein 4521236 5749705 Daci_4118 Delftia acidovorans SPH-1 hypothetical protein YP_001565134.1 4521015 D 398578 CDS YP_001565135.1 160899553 5749706 4521463..4521861 1 NC_010002.1 hypothetical protein 4521861 5749706 Daci_4119 Delftia acidovorans SPH-1 hypothetical protein YP_001565135.1 4521463 D 398578 CDS YP_001565136.1 160899554 5749707 4521858..4522151 1 NC_010002.1 hypothetical protein 4522151 5749707 Daci_4120 Delftia acidovorans SPH-1 hypothetical protein YP_001565136.1 4521858 D 398578 CDS YP_001565137.1 160899555 5749708 4522144..4522488 1 NC_010002.1 hypothetical protein 4522488 5749708 Daci_4121 Delftia acidovorans SPH-1 hypothetical protein YP_001565137.1 4522144 D 398578 CDS YP_001565138.1 160899556 5749709 4522807..4523184 1 NC_010002.1 hypothetical protein 4523184 5749709 Daci_4122 Delftia acidovorans SPH-1 hypothetical protein YP_001565138.1 4522807 D 398578 CDS YP_001565139.1 160899557 5749710 4523186..4523593 1 NC_010002.1 hypothetical protein 4523593 5749710 Daci_4123 Delftia acidovorans SPH-1 hypothetical protein YP_001565139.1 4523186 D 398578 CDS YP_001565140.1 160899558 5749711 4523590..4523784 1 NC_010002.1 hypothetical protein 4523784 5749711 Daci_4124 Delftia acidovorans SPH-1 hypothetical protein YP_001565140.1 4523590 D 398578 CDS YP_001565141.1 160899559 5749712 4524009..4524617 1 NC_010002.1 PFAM: ERF family protein; KEGG: mms:mma_2226 hypothetical protein; ERF family protein 4524617 5749712 Daci_4125 Delftia acidovorans SPH-1 ERF family protein YP_001565141.1 4524009 D 398578 CDS YP_001565142.1 160899560 5749713 4524627..4524884 1 NC_010002.1 hypothetical protein 4524884 5749713 Daci_4126 Delftia acidovorans SPH-1 hypothetical protein YP_001565142.1 4524627 D 398578 CDS YP_001565143.1 160899561 5749714 4524893..4525384 1 NC_010002.1 hypothetical protein 4525384 5749714 Daci_4127 Delftia acidovorans SPH-1 hypothetical protein YP_001565143.1 4524893 D 398578 CDS YP_001565144.1 160899562 5749715 4525421..4525708 1 NC_010002.1 PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: pnu:Pnuc_0838 histone family protein nucleoid-structuring protein H-NS; histone family protein nucleoid-structuring protein H-NS 4525708 5749715 Daci_4128 Delftia acidovorans SPH-1 histone family protein nucleoid-structuring protein H-NS YP_001565144.1 4525421 D 398578 CDS YP_001565145.1 160899563 5749716 4525741..4526130 1 NC_010002.1 hypothetical protein 4526130 5749716 Daci_4129 Delftia acidovorans SPH-1 hypothetical protein YP_001565145.1 4525741 D 398578 CDS YP_001565146.1 160899564 5749717 4526310..4527257 1 NC_010002.1 hypothetical protein 4527257 5749717 Daci_4130 Delftia acidovorans SPH-1 hypothetical protein YP_001565146.1 4526310 D 398578 CDS YP_001565147.1 160899565 5749718 4527260..4527739 1 NC_010002.1 KEGG: xfa:XF1762 hypothetical protein; hypothetical protein 4527739 5749718 Daci_4131 Delftia acidovorans SPH-1 hypothetical protein YP_001565147.1 4527260 D 398578 CDS YP_001565148.1 160899566 5749719 4527736..4528143 1 NC_010002.1 PFAM: HNH endonuclease; KEGG: pde:Pden_3731 HNH endonuclease; HNH endonuclease 4528143 5749719 Daci_4132 Delftia acidovorans SPH-1 HNH endonuclease YP_001565148.1 4527736 D 398578 CDS YP_001565149.1 160899567 5749720 4528145..4528498 1 NC_010002.1 hypothetical protein 4528498 5749720 Daci_4133 Delftia acidovorans SPH-1 hypothetical protein YP_001565149.1 4528145 D 398578 CDS YP_001565150.1 160899568 5749721 4528579..4529028 1 NC_010002.1 KEGG: pna:Pnap_4291 hypothetical protein; hypothetical protein 4529028 5749721 Daci_4134 Delftia acidovorans SPH-1 hypothetical protein YP_001565150.1 4528579 D 398578 CDS YP_001565151.1 160899569 5749722 4529025..4529216 1 NC_010002.1 hypothetical protein 4529216 5749722 Daci_4135 Delftia acidovorans SPH-1 hypothetical protein YP_001565151.1 4529025 D 398578 CDS YP_001565152.1 160899570 5749723 4529218..4529472 1 NC_010002.1 hypothetical protein 4529472 5749723 Daci_4136 Delftia acidovorans SPH-1 hypothetical protein YP_001565152.1 4529218 D 398578 CDS YP_001565153.1 160899571 5749724 4529541..4529915 1 NC_010002.1 PFAM: Prophage CP4-57 regulatory; KEGG: bte:BTH_I1915 prophage CP4-57 regulatory protein (AlpA) family; phage transcriptional regulator AlpA 4529915 5749724 Daci_4137 Delftia acidovorans SPH-1 phage transcriptional regulator AlpA YP_001565153.1 4529541 D 398578 CDS YP_001565154.1 160899572 5749725 complement(4529912..4531123) 1 NC_010002.1 PFAM: integrase family protein; KEGG: bte:BTH_I1914 integrative genetic element Gsu32, integrase, putative; integrase family protein 4531123 5749725 Daci_4138 Delftia acidovorans SPH-1 integrase family protein YP_001565154.1 4529912 R 398578 CDS YP_001565155.1 160899573 5749727 4531718..4533646 1 NC_010002.1 PFAM: integrase family protein; KEGG: eba:c1A49 integrase (int); integrase family protein 4533646 5749727 Daci_4139 Delftia acidovorans SPH-1 integrase family protein YP_001565155.1 4531718 D 398578 CDS YP_001565156.1 160899574 5749728 4534211..4534966 1 NC_010002.1 KEGG: xcv:XCV2416 hypothetical protein; hypothetical protein 4534966 5749728 Daci_4140 Delftia acidovorans SPH-1 hypothetical protein YP_001565156.1 4534211 D 398578 CDS YP_001565157.1 160899575 5749729 4535085..4535297 1 NC_010002.1 PFAM: Prophage CP4-57 regulatory; KEGG: xcv:XCV2415 putative regulatory protein, AlpA family; phage transcriptional regulator AlpA 4535297 5749729 Daci_4141 Delftia acidovorans SPH-1 phage transcriptional regulator AlpA YP_001565157.1 4535085 D 398578 CDS YP_001565158.1 160899576 5749730 4535340..4536215 1 NC_010002.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: xcv:XCV2414 chromosome partitioning related protein; cobyrinic acid ac-diamide synthase 4536215 5749730 Daci_4142 Delftia acidovorans SPH-1 cobyrinic acid ac-diamide synthase YP_001565158.1 4535340 D 398578 CDS YP_001565159.1 160899577 5749731 4536199..4536447 1 NC_010002.1 KEGG: xcv:XCV2413 hypothetical protein; hypothetical protein 4536447 5749731 Daci_4143 Delftia acidovorans SPH-1 hypothetical protein YP_001565159.1 4536199 D 398578 CDS YP_001565160.1 160899578 5749732 4536440..4538032 1 NC_010002.1 KEGG: xcv:XCV2412 hypothetical protein; hypothetical protein 4538032 5749732 Daci_4144 Delftia acidovorans SPH-1 hypothetical protein YP_001565160.1 4536440 D 398578 CDS YP_001565161.1 160899579 5749733 4538048..4538608 1 NC_010002.1 KEGG: xfa:XF1782 hypothetical protein; hypothetical protein 4538608 5749733 Daci_4145 Delftia acidovorans SPH-1 hypothetical protein YP_001565161.1 4538048 D 398578 CDS YP_001565162.1 160899580 5749734 4538612..4539856 1 NC_010002.1 KEGG: xcv:XCV2410 hypothetical protein; hypothetical protein 4539856 5749734 Daci_4146 Delftia acidovorans SPH-1 hypothetical protein YP_001565162.1 4538612 D 398578 CDS YP_001565163.1 160899581 5749735 4540174..4540974 1 NC_010002.1 PFAM: Domain of unknown function DUF1845; KEGG: xcv:XCV2409 hypothetical protein; hypothetical protein 4540974 5749735 Daci_4147 Delftia acidovorans SPH-1 hypothetical protein YP_001565163.1 4540174 D 398578 CDS YP_001565164.1 160899582 5749736 4540971..4541498 1 NC_010002.1 KEGG: ajs:Ajs_1447 putative integrase regulator R protein; putative integrase regulator R protein 4541498 5749736 Daci_4148 Delftia acidovorans SPH-1 putative integrase regulator R protein YP_001565164.1 4540971 D 398578 CDS YP_001565165.1 160899583 5749737 4541572..4542012 1 NC_010002.1 binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein 4542012 5749737 Daci_4149 Delftia acidovorans SPH-1 single-stranded DNA-binding protein YP_001565165.1 4541572 D 398578 CDS YP_001565166.1 160899584 5749738 4542282..4544294 1 NC_010002.1 decatenates replicating daughter chromosomes; DNA topoisomerase III 4544294 5749738 Daci_4150 Delftia acidovorans SPH-1 DNA topoisomerase III YP_001565166.1 4542282 D 398578 CDS YP_001565167.1 160899585 5749739 4544818..4545063 1 NC_010002.1 KEGG: xcv:XCV2404 hypothetical protein; hypothetical protein 4545063 5749739 Daci_4151 Delftia acidovorans SPH-1 hypothetical protein YP_001565167.1 4544818 D 398578 CDS YP_001565168.1 160899586 5749740 4545393..4545605 1 NC_010002.1 KEGG: bxe:Bxe_A1220 hypothetical protein; hypothetical protein 4545605 5749740 Daci_4152 Delftia acidovorans SPH-1 hypothetical protein YP_001565168.1 4545393 D 398578 CDS YP_001565169.1 160899587 5749741 4545627..4546019 1 NC_010002.1 KEGG: xcv:XCV2402 hypothetical protein; hypothetical protein 4546019 5749741 Daci_4153 Delftia acidovorans SPH-1 hypothetical protein YP_001565169.1 4545627 D 398578 CDS YP_001565170.1 160899588 5749742 4546232..4546969 1 NC_010002.1 KEGG: ajs:Ajs_1439 hypothetical protein; hypothetical protein 4546969 5749742 Daci_4154 Delftia acidovorans SPH-1 hypothetical protein YP_001565170.1 4546232 D 398578 CDS YP_001565171.1 160899589 5749743 4547064..4547342 1 NC_010002.1 KEGG: ajs:Ajs_1303 hypothetical protein; hypothetical protein 4547342 5749743 Daci_4155 Delftia acidovorans SPH-1 hypothetical protein YP_001565171.1 4547064 D 398578 CDS YP_001565172.1 160899590 5749744 4547623..4548435 1 NC_010002.1 KEGG: ajs:Ajs_1437 hypothetical protein; hypothetical protein 4548435 5749744 Daci_4156 Delftia acidovorans SPH-1 hypothetical protein YP_001565172.1 4547623 D 398578 CDS YP_001565173.1 160899591 5749745 4548814..4549728 1 NC_010002.1 KEGG: xcv:XCV2395 hypothetical protein; hypothetical protein 4549728 5749745 Daci_4157 Delftia acidovorans SPH-1 hypothetical protein YP_001565173.1 4548814 D 398578 CDS YP_001565174.1 160899592 5749746 4549879..4550706 1 NC_010002.1 PFAM: protein of unknown function DUF932; KEGG: har:HEAR1987 hypothetical protein; hypothetical protein 4550706 5749746 Daci_4158 Delftia acidovorans SPH-1 hypothetical protein YP_001565174.1 4549879 D 398578 CDS YP_001565175.1 160899593 5749747 4550802..4551500 1 NC_010002.1 KEGG: ajs:Ajs_1293 hypothetical protein; hypothetical protein 4551500 5749747 Daci_4159 Delftia acidovorans SPH-1 hypothetical protein YP_001565175.1 4550802 D 398578 CDS YP_001565176.1 160899594 5749748 4551595..4552002 1 NC_010002.1 KEGG: har:HEAR1990 hypothetical protein; hypothetical protein 4552002 5749748 Daci_4160 Delftia acidovorans SPH-1 hypothetical protein YP_001565176.1 4551595 D 398578 CDS YP_001565177.1 160899595 5749749 4552056..4553858 1 NC_010002.1 PFAM: helicase domain protein; KEGG: rme:Rmet_2330 helicase-like protein; helicase domain-containing protein 4553858 5749749 Daci_4161 Delftia acidovorans SPH-1 helicase domain-containing protein YP_001565177.1 4552056 D 398578 CDS YP_001565178.1 160899596 5749750 4554031..4555833 1 NC_010002.1 KEGG: xau:Xaut_3047 ATP-dependent endonuclease family protein; ATP-dependent endonuclease family protein 4555833 5749750 Daci_4162 Delftia acidovorans SPH-1 ATP-dependent endonuclease family protein YP_001565178.1 4554031 D 398578 CDS YP_001565179.1 160899597 5749751 4555899..4557551 1 NC_010002.1 PFAM: UvrD/REP helicase; KEGG: xau:Xaut_3048 UvrD/REP helicase; UvrD/REP helicase 4557551 5749751 Daci_4163 Delftia acidovorans SPH-1 UvrD/REP helicase YP_001565179.1 4555899 D 398578 CDS YP_001565180.1 160899598 5749752 4557694..4558272 1 NC_010002.1 KEGG: ajs:Ajs_1279 putative secreted protein; hypothetical protein 4558272 5749752 Daci_4164 Delftia acidovorans SPH-1 hypothetical protein YP_001565180.1 4557694 D 398578 CDS YP_001565181.1 160899599 5749753 4558269..4558910 1 NC_010002.1 KEGG: bxe:Bxe_A1199 hypothetical protein; hypothetical protein 4558910 5749753 Daci_4165 Delftia acidovorans SPH-1 hypothetical protein YP_001565181.1 4558269 D 398578 CDS YP_001565182.1 160899600 5749754 4558925..4559662 1 NC_010002.1 KEGG: ajs:Ajs_1411 putative secreted protein; hypothetical protein 4559662 5749754 Daci_4166 Delftia acidovorans SPH-1 hypothetical protein YP_001565182.1 4558925 D 398578 CDS YP_001565183.1 160899601 5749755 4559644..4560249 1 NC_010002.1 PFAM: Lytic transglycosylase catalytic; KEGG: bxe:Bxe_A1197 hypothetical protein; lytic transglycosylase catalytic subunit 4560249 5749755 Daci_4167 Delftia acidovorans SPH-1 lytic transglycosylase catalytic subunit YP_001565183.1 4559644 D 398578 CDS YP_001565184.1 160899602 5749756 4560246..4560794 1 NC_010002.1 KEGG: bxe:Bxe_A1196 hypothetical protein; hypothetical protein 4560794 5749756 Daci_4168 Delftia acidovorans SPH-1 hypothetical protein YP_001565184.1 4560246 D 398578 CDS YP_001565185.1 160899603 5749757 4560799..4562982 1 NC_010002.1 KEGG: ajs:Ajs_1274 hypothetical protein; hypothetical protein 4562982 5749757 Daci_4169 Delftia acidovorans SPH-1 hypothetical protein YP_001565185.1 4560799 D 398578 CDS YP_001565186.1 160899604 5749758 4562979..4563740 1 NC_010002.1 KEGG: pla:Plav_3415 hypothetical protein; hypothetical protein 4563740 5749758 Daci_4170 Delftia acidovorans SPH-1 hypothetical protein YP_001565186.1 4562979 D 398578 CDS YP_001565187.1 160899605 5749759 4563839..4564222 1 NC_010002.1 PFAM: plasmid conserved hypothetical protein RAQPRD; KEGG: har:HEAR2012 conserved hypothetical protein; putative signal peptide; hypothetical protein 4564222 5749759 Daci_4171 Delftia acidovorans SPH-1 hypothetical protein YP_001565187.1 4563839 D 398578 CDS YP_001565188.1 160899606 5749760 4564219..4564452 1 NC_010002.1 KEGG: bxe:Bxe_A1191 hypothetical protein; hypothetical protein 4564452 5749760 Daci_4172 Delftia acidovorans SPH-1 hypothetical protein YP_001565188.1 4564219 D 398578 CDS YP_001565189.1 160899607 5749761 4564469..4564828 1 NC_010002.1 KEGG: har:HEAR2014 hypothetical protein; hypothetical protein 4564828 5749761 Daci_4173 Delftia acidovorans SPH-1 hypothetical protein YP_001565189.1 4564469 D 398578 CDS YP_001565190.1 160899608 5749762 4564842..4565252 1 NC_010002.1 KEGG: bxe:Bxe_A1189 hypothetical protein; hypothetical protein 4565252 5749762 Daci_4174 Delftia acidovorans SPH-1 hypothetical protein YP_001565190.1 4564842 D 398578 CDS YP_001565191.1 160899609 5749763 4565249..4565941 1 NC_010002.1 KEGG: ajs:Ajs_1402 putative secreted protein; hypothetical protein 4565941 5749763 Daci_4175 Delftia acidovorans SPH-1 hypothetical protein YP_001565191.1 4565249 D 398578 CDS YP_001565192.1 160899610 5749764 4565938..4566876 1 NC_010002.1 KEGG: har:HEAR2017 conserved hypothetical protein; putative signal peptide; putative signal peptide 4566876 5749764 Daci_4176 Delftia acidovorans SPH-1 putative signal peptide YP_001565192.1 4565938 D 398578 CDS YP_001565193.1 160899611 5749765 4566866..4568275 1 NC_010002.1 KEGG: rme:Rmet_2351 putative secreted protein; hypothetical protein 4568275 5749765 Daci_4177 Delftia acidovorans SPH-1 hypothetical protein YP_001565193.1 4566866 D 398578 CDS YP_001565194.1 160899612 5749766 4568256..4568705 1 NC_010002.1 KEGG: har:HEAR2019 conserved hypothetical protein; putative signal peptide; putative signal peptide 4568705 5749766 Daci_4178 Delftia acidovorans SPH-1 putative signal peptide YP_001565194.1 4568256 D 398578 CDS YP_001565195.1 160899613 5749767 4568705..4571614 1 NC_010002.1 KEGG: ajs:Ajs_1256 hypothetical protein; hypothetical protein 4571614 5749767 Daci_4179 Delftia acidovorans SPH-1 hypothetical protein YP_001565195.1 4568705 D 398578 CDS YP_001565196.1 160899614 5749768 4571657..4572394 1 NC_010002.1 KEGG: bxe:Bxe_A1183 hypothetical protein; hypothetical protein 4572394 5749768 Daci_4180 Delftia acidovorans SPH-1 hypothetical protein YP_001565196.1 4571657 D 398578 CDS YP_001565197.1 160899615 5749769 4572573..4573067 1 NC_010002.1 PFAM: DNA repair protein RadC; KEGG: ajs:Ajs_1396 DNA repair protein RadC; DNA repair protein RadC 4573067 5749769 Daci_4181 Delftia acidovorans SPH-1 DNA repair protein RadC YP_001565197.1 4572573 D 398578 CDS YP_001565198.1 160899616 5749770 4573232..4573678 1 NC_010002.1 PFAM: protein of unknown function DUF1525; KEGG: har:HEAR2023 hypothetical protein; hypothetical protein 4573678 5749770 Daci_4182 Delftia acidovorans SPH-1 hypothetical protein YP_001565198.1 4573232 D 398578 CDS YP_001565199.1 160899617 5749771 4573675..4574622 1 NC_010002.1 PFAM: protein of unknown function DUF1527; KEGG: xcv:XCV2363 putative secreted protein; hypothetical protein 4574622 5749771 Daci_4183 Delftia acidovorans SPH-1 hypothetical protein YP_001565199.1 4573675 D 398578 CDS YP_001565200.1 160899618 5749772 4574633..4576039 1 NC_010002.1 KEGG: rme:Rmet_2358 hypothetical protein; hypothetical protein 4576039 5749772 Daci_4184 Delftia acidovorans SPH-1 hypothetical protein YP_001565200.1 4574633 D 398578 CDS YP_001565201.1 160899619 5749773 4576036..4576407 1 NC_010002.1 KEGG: pla:Plav_3430 hypothetical protein; hypothetical protein 4576407 5749773 Daci_4185 Delftia acidovorans SPH-1 hypothetical protein YP_001565201.1 4576036 D 398578 CDS YP_001565202.1 160899620 5749774 4576423..4577946 1 NC_010002.1 KEGG: pla:Plav_3431 hypothetical protein; hypothetical protein 4577946 5749774 Daci_4186 Delftia acidovorans SPH-1 hypothetical protein YP_001565202.1 4576423 D 398578 CDS YP_001565203.1 160899621 5749775 complement(4577953..4578312) 1 NC_010002.1 KEGG: pla:Plav_3432 hypothetical protein; hypothetical protein 4578312 5749775 Daci_4187 Delftia acidovorans SPH-1 hypothetical protein YP_001565203.1 4577953 R 398578 CDS YP_001565204.1 160899622 5749776 complement(4578340..4578798) 1 NC_010002.1 KEGG: neu:NE0292 hypothetical protein; hypothetical protein 4578798 5749776 Daci_4188 Delftia acidovorans SPH-1 hypothetical protein YP_001565204.1 4578340 R 398578 CDS YP_001565205.1 160899623 5749777 complement(4578798..4579115) 1 NC_010002.1 TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: neu:NE0293 hypothetical protein; AbrB family transcriptional regulator 4579115 5749777 Daci_4189 Delftia acidovorans SPH-1 AbrB family transcriptional regulator YP_001565205.1 4578798 R 398578 CDS YP_001565206.1 160899624 5749778 4579413..4581266 1 NC_010002.1 PFAM: protein of unknown function DUF1528; Relaxase; KEGG: xcv:XCV2356 hypothetical protein; relaxase 4581266 5749778 Daci_4190 Delftia acidovorans SPH-1 relaxase YP_001565206.1 4579413 D 398578 CDS YP_001565207.1 160899625 5749779 complement(4581297..4584632) 1 NC_010002.1 PFAM: Cold-shock protein DNA-binding; KEGG: hpy:HP0453 hypothetical protein; DNA-binding cold-shock protein 4584632 5749779 Daci_4191 Delftia acidovorans SPH-1 DNA-binding cold-shock protein YP_001565207.1 4581297 R 398578 CDS YP_001565208.1 160899626 5749780 complement(4584629..4587271) 1 NC_010002.1 KEGG: hpy:HP0452 hypothetical protein; chromosome segregation ATPase-like protein 4587271 5749780 Daci_4192 Delftia acidovorans SPH-1 chromosome segregation ATPase-like protein YP_001565208.1 4584629 R 398578 CDS YP_001565209.1 160899627 5749781 4588069..4588449 1 NC_010002.1 hypothetical protein 4588449 5749781 Daci_4193 Delftia acidovorans SPH-1 hypothetical protein YP_001565209.1 4588069 D 398578 CDS YP_001565210.1 160899628 5749782 complement(4589202..4592582) 1 NC_010002.1 SMART: AAA ATPase; KEGG: pna:Pnap_4258 superfamily I DNA and RNA helicases and helicase subunits-like protein; ATPase AAA 4592582 5749782 Daci_4194 Delftia acidovorans SPH-1 ATPase AAA YP_001565210.1 4589202 R 398578 CDS YP_001565211.1 160899629 5749783 complement(4592579..4593922) 1 NC_010002.1 KEGG: pna:Pnap_4257 protein kinase; serine/threonine protein kinase 4593922 5749783 Daci_4195 Delftia acidovorans SPH-1 serine/threonine protein kinase YP_001565211.1 4592579 R 398578 CDS YP_001565212.1 160899630 5749784 complement(4593915..4594631) 1 NC_010002.1 KEGG: pna:Pnap_4256 hypothetical protein; hypothetical protein 4594631 5749784 Daci_4196 Delftia acidovorans SPH-1 hypothetical protein YP_001565212.1 4593915 R 398578 CDS YP_001565213.1 160899631 5749785 complement(4594628..4595116) 1 NC_010002.1 hypothetical protein 4595116 5749785 Daci_4197 Delftia acidovorans SPH-1 hypothetical protein YP_001565213.1 4594628 R 398578 CDS YP_001565214.1 160899632 5749786 complement(4595113..4596195) 1 NC_010002.1 KEGG: hpy:HP0986 hypothetical protein; hypothetical protein 4596195 5749786 Daci_4198 Delftia acidovorans SPH-1 hypothetical protein YP_001565214.1 4595113 R 398578 CDS YP_001565215.1 160899633 5749787 complement(4596873..4599557) 1 NC_010002.1 PFAM: cell divisionFtsK/SpoIIIE; KEGG: hpj:jhp0061 hypothetical protein; cell division protein FtsK 4599557 5749787 Daci_4199 Delftia acidovorans SPH-1 cell division protein FtsK YP_001565215.1 4596873 R 398578 CDS YP_001565216.1 160899634 5749788 complement(4599545..4599823) 1 NC_010002.1 hypothetical protein 4599823 5749788 Daci_4200 Delftia acidovorans SPH-1 hypothetical protein YP_001565216.1 4599545 R 398578 CDS YP_001565217.1 160899635 5749789 complement(4600109..4601419) 1 NC_010002.1 KEGG: tfu:Tfu_1419 hypothetical protein; hypothetical protein 4601419 5749789 Daci_4201 Delftia acidovorans SPH-1 hypothetical protein YP_001565217.1 4600109 R 398578 CDS YP_001565218.1 160899636 5749790 complement(4601436..4601705) 1 NC_010002.1 KEGG: hpj:jhp0057 hypothetical protein; hypothetical protein 4601705 5749790 Daci_4202 Delftia acidovorans SPH-1 hypothetical protein YP_001565218.1 4601436 R 398578 CDS YP_001565219.1 160899637 5749791 complement(4601705..4602439) 1 NC_010002.1 PFAM: von Willebrand factor type A; KEGG: pna:Pnap_4255 von Willebrand factor, type A; von Willebrand factor type A 4602439 5749791 Daci_4203 Delftia acidovorans SPH-1 von Willebrand factor type A YP_001565219.1 4601705 R 398578 CDS YP_001565220.1 160899638 5749792 complement(4602520..4605525) 1 NC_010002.1 PFAM: type III restriction protein res subunit; KEGG: aav:Aave_0162 type III restriction enzyme, res subunit; type III restriction protein res subunit 4605525 5749792 Daci_4204 Delftia acidovorans SPH-1 type III restriction protein res subunit YP_001565220.1 4602520 R 398578 CDS YP_001565221.1 160899639 5749793 complement(4605537..4607522) 1 NC_010002.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: cte:CT0908 type III restriction system methylase; DNA methylase N-4/N-6 domain-containing protein 4607522 5749793 Daci_4205 Delftia acidovorans SPH-1 DNA methylase N-4/N-6 domain-containing protein YP_001565221.1 4605537 R 398578 CDS YP_001565222.1 160899640 5749794 complement(4607549..4608352) 1 NC_010002.1 KEGG: cte:CT0907 hypothetical protein; hypothetical protein 4608352 5749794 Daci_4206 Delftia acidovorans SPH-1 hypothetical protein YP_001565222.1 4607549 R 398578 CDS YP_001565223.1 160899641 5749795 complement(4608349..4611582) 1 NC_010002.1 PFAM: helicase domain protein; SMART: DEAD-like helicases; KEGG: aav:Aave_0157 helicase domain protein; helicase domain-containing protein 4611582 5749795 Daci_4207 Delftia acidovorans SPH-1 helicase domain-containing protein YP_001565223.1 4608349 R 398578 CDS YP_001565224.1 160899642 5749796 complement(4611595..4612503) 1 NC_010002.1 KEGG: neu:NE2519 hypothetical protein; hypothetical protein 4612503 5749796 Daci_4208 Delftia acidovorans SPH-1 hypothetical protein YP_001565224.1 4611595 R 398578 CDS YP_001565225.1 160899643 5749797 4612783..4613673 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pla:Plav_3462 transcriptional regulator, LysR family; LysR family transcriptional regulator 4613673 5749797 Daci_4209 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001565225.1 4612783 D 398578 CDS YP_001565226.1 160899644 5749798 complement(4613711..4614031) 1 NC_010002.1 PFAM: helix-turn-helix domain protein; KEGG: rme:Rmet_2401 transcriptional regulator, XRE family; XRE family transcriptional regulator 4614031 5749798 Daci_4210 Delftia acidovorans SPH-1 XRE family transcriptional regulator YP_001565226.1 4613711 R 398578 CDS YP_001565227.1 160899645 5749799 4614138..4614779 1 NC_010002.1 PFAM: LysR substrate-binding; KEGG: xfa:XF1719 hypothetical protein; LysR family transcriptional regulator 4614779 5749799 Daci_4211 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001565227.1 4614138 D 398578 CDS YP_001565228.1 160899646 5749800 4615154..4615417 1 NC_010002.1 KEGG: bur:Bcep18194_B2350 hypothetical protein; hypothetical protein 4615417 5749800 Daci_4212 Delftia acidovorans SPH-1 hypothetical protein YP_001565228.1 4615154 D 398578 CDS YP_001565229.1 160899647 5749801 4615460..4616068 1 NC_010002.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bxe:Bxe_B1629 sigma-24 (FecI); ECF subfamily RNA polymerase sigma-24 factor 4616068 5749801 Daci_4213 Delftia acidovorans SPH-1 ECF subfamily RNA polymerase sigma-24 factor YP_001565229.1 4615460 D 398578 CDS YP_001565230.1 160899648 5749802 4616065..4616592 1 NC_010002.1 KEGG: bch:Bcen2424_4478 hypothetical protein; hypothetical protein 4616592 5749802 Daci_4214 Delftia acidovorans SPH-1 hypothetical protein YP_001565230.1 4616065 D 398578 CDS YP_001565231.1 160899649 5749803 4616589..4617152 1 NC_010002.1 KEGG: bxe:Bxe_B1627 putative membrane-associated protein; putative membrane-associated protein 4617152 5749803 Daci_4215 Delftia acidovorans SPH-1 putative membrane-associated protein YP_001565231.1 4616589 D 398578 CDS YP_001565232.1 160899650 5749804 4617219..4618583 1 NC_010002.1 PFAM: Protein of unknown function DUF1800; KEGG: bxe:Bxe_B1626 hypothetical protein; hypothetical protein 4618583 5749804 Daci_4216 Delftia acidovorans SPH-1 hypothetical protein YP_001565232.1 4617219 D 398578 CDS YP_001565233.1 160899651 5749805 4618589..4619812 1 NC_010002.1 PFAM: protein of unknown function DUF1501; KEGG: bxe:Bxe_B1625 hypothetical protein; hypothetical protein 4619812 5749805 Daci_4217 Delftia acidovorans SPH-1 hypothetical protein YP_001565233.1 4618589 D 398578 CDS YP_001565234.1 160899652 5749806 complement(4619912..4620241) 1 NC_010002.1 KEGG: rso:RSc3291 hypothetical protein; hypothetical protein 4620241 5749806 Daci_4218 Delftia acidovorans SPH-1 hypothetical protein YP_001565234.1 4619912 R 398578 CDS YP_001565235.1 160899653 5749807 complement(4620951..4621934) 1 NC_010002.1 KEGG: sma:SAV3034 hypothetical protein; hypothetical protein 4621934 5749807 Daci_4219 Delftia acidovorans SPH-1 hypothetical protein YP_001565235.1 4620951 R 398578 CDS YP_001565236.1 160899654 5749808 complement(4621955..4622341) 1 NC_010002.1 KEGG: mmr:Mmar10_2551 hypothetical protein; hypothetical protein 4622341 5749808 Daci_4220 Delftia acidovorans SPH-1 hypothetical protein YP_001565236.1 4621955 R 398578 CDS YP_001565237.1 160899655 5749809 4622382..4623527 1 NC_010002.1 KEGG: aav:Aave_3037 hypothetical protein; hypothetical protein 4623527 5749809 Daci_4221 Delftia acidovorans SPH-1 hypothetical protein YP_001565237.1 4622382 D 398578 CDS YP_001565238.1 160899656 5749810 4623548..4624375 1 NC_010002.1 KEGG: bxe:Bxe_B0568 hypothetical protein; hypothetical protein 4624375 5749810 Daci_4222 Delftia acidovorans SPH-1 hypothetical protein YP_001565238.1 4623548 D 398578 CDS YP_001565239.1 160899657 5749811 4625083..4625277 1 NC_010002.1 hypothetical protein 4625277 5749811 Daci_4223 Delftia acidovorans SPH-1 hypothetical protein YP_001565239.1 4625083 D 398578 CDS YP_001565240.1 160899658 5749812 4625316..4626026 1 NC_010002.1 PFAM: Threonyl/alanyl tRNA synthetase SAD; KEGG: rme:Rmet_2509 threonyl/alanyl tRNA synthetase, SAD; threonyl/alanyl tRNA synthetase SAD 4626026 5749812 Daci_4224 Delftia acidovorans SPH-1 threonyl/alanyl tRNA synthetase SAD YP_001565240.1 4625316 D 398578 CDS YP_001565241.1 160899659 5749813 complement(4626056..4626346) 1 NC_010002.1 hypothetical protein 4626346 5749813 Daci_4225 Delftia acidovorans SPH-1 hypothetical protein YP_001565241.1 4626056 R 398578 CDS YP_001565242.1 160899660 5749814 4626675..4627133 1 NC_010002.1 TIGRFAM: azurin; PFAM: blue (type 1) copper domain protein; KEGG: aav:Aave_2435 azurin; azurin 4627133 5749814 Daci_4226 Delftia acidovorans SPH-1 azurin YP_001565242.1 4626675 D 398578 CDS YP_001565243.1 160899661 5749815 complement(4627255..4627767) 1 NC_010002.1 hypothetical protein 4627767 5749815 Daci_4227 Delftia acidovorans SPH-1 hypothetical protein YP_001565243.1 4627255 R 398578 CDS YP_001565244.1 160899662 5749816 complement(4627754..4629091) 1 NC_010002.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: vei:Veis_4935 protein of unknown function DUF21; hypothetical protein 4629091 5749816 Daci_4228 Delftia acidovorans SPH-1 hypothetical protein YP_001565244.1 4627754 R 398578 CDS YP_001565245.1 160899663 5749817 complement(4629271..4629633) 1 NC_010002.1 KEGG: ajs:Ajs_1665 hypothetical protein; hypothetical protein 4629633 5749817 Daci_4229 Delftia acidovorans SPH-1 hypothetical protein YP_001565245.1 4629271 R 398578 CDS YP_001565246.1 160899664 5749818 4629767..4630273 1 NC_010002.1 KEGG: har:HEAR0763 hypothetical protein; hypothetical protein 4630273 5749818 Daci_4230 Delftia acidovorans SPH-1 hypothetical protein YP_001565246.1 4629767 D 398578 CDS YP_001565247.1 160899665 5749819 4630501..4631085 1 NC_010002.1 PFAM: isochorismatase hydrolase; KEGG: bch:Bcen2424_4549 isochorismatase hydrolase; isochorismatase hydrolase 4631085 5749819 Daci_4231 Delftia acidovorans SPH-1 isochorismatase hydrolase YP_001565247.1 4630501 D 398578 CDS YP_001565248.1 160899666 5749820 4631233..4632120 1 NC_010002.1 KEGG: rpa:RPA1061 possible polyketide synthesis protein; polyketide biosynthesis O-methyltransferase-like protein 4632120 5749820 Daci_4232 Delftia acidovorans SPH-1 polyketide biosynthesis O-methyltransferase-like protein YP_001565248.1 4631233 D 398578 CDS YP_001565249.1 160899667 5749821 complement(4632188..4632817) 1 NC_010002.1 PFAM: nitroreductase; KEGG: bte:BTH_II1923 nitroreductase family protein; nitroreductase 4632817 5749821 Daci_4233 Delftia acidovorans SPH-1 nitroreductase YP_001565249.1 4632188 R 398578 CDS YP_001565250.1 160899668 5749822 complement(4632814..4633317) 1 NC_010002.1 PFAM: ferric-uptake regulator; KEGG: aav:Aave_4555 ferric uptake regulator, Fur family; ferric uptake regulator family protein 4633317 5749822 Daci_4234 Delftia acidovorans SPH-1 ferric uptake regulator family protein YP_001565250.1 4632814 R 398578 CDS YP_001565251.1 160899669 5749823 complement(4633314..4633943) 1 NC_010002.1 KEGG: aav:Aave_3322 hypothetical protein; hypothetical protein 4633943 5749823 Daci_4235 Delftia acidovorans SPH-1 hypothetical protein YP_001565251.1 4633314 R 398578 CDS YP_001565252.1 160899670 5749824 complement(4634223..4635254) 1 NC_010002.1 PFAM: cytochrome c class I; KEGG: bur:Bcep18194_B0408 cytochrome c, class I; class I cytochrome c 4635254 5749824 Daci_4236 Delftia acidovorans SPH-1 class I cytochrome c YP_001565252.1 4634223 R 398578 CDS YP_001565253.1 160899671 5749825 complement(4635272..4636060) 1 NC_010002.1 PFAM: cytochrome c class I; KEGG: bam:Bamb_4605 cytochrome c, class I; class I cytochrome c 4636060 5749825 Daci_4237 Delftia acidovorans SPH-1 class I cytochrome c YP_001565253.1 4635272 R 398578 CDS YP_001565254.1 160899672 5749826 complement(4636230..4637774) 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ajs:Ajs_2432 integral membrane sensor signal transduction histidine kinase; histidine kinase 4637774 5749826 Daci_4238 Delftia acidovorans SPH-1 histidine kinase YP_001565254.1 4636230 R 398578 CDS YP_001565255.1 160899673 5749827 complement(4637771..4638433) 1 NC_010002.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: psa:PST_2709 probable two-component response regulator; two component transcriptional regulator 4638433 5749827 Daci_4239 Delftia acidovorans SPH-1 two component transcriptional regulator YP_001565255.1 4637771 R 398578 CDS YP_001565256.1 160899674 5749828 4639241..4640239 1 NC_010002.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: tbd:Tbd_2789 probable thiol:disulfide interchange protein; redoxin domain-containing protein 4640239 5749828 Daci_4240 Delftia acidovorans SPH-1 redoxin domain-containing protein YP_001565256.1 4639241 D 398578 CDS YP_001565257.1 160899675 5749829 4640236..4641042 1 NC_010002.1 Involved in disulfide bond formation; disulfide isomerase/thiol-disulfide oxidase 4641042 dsbG 5749829 dsbG Delftia acidovorans SPH-1 disulfide isomerase/thiol-disulfide oxidase YP_001565257.1 4640236 D 398578 CDS YP_001565258.1 160899676 5749830 4641054..4641455 1 NC_010002.1 PFAM: Domain of unknown function DUF1791; KEGG: bbr:BB2321 hypothetical protein; hypothetical protein 4641455 5749830 Daci_4242 Delftia acidovorans SPH-1 hypothetical protein YP_001565258.1 4641054 D 398578 CDS YP_001565259.1 160899677 5749831 complement(4641440..4641904) 1 NC_010002.1 KEGG: cvi:CV_1729 hypothetical protein; hypothetical protein 4641904 5749831 Daci_4243 Delftia acidovorans SPH-1 hypothetical protein YP_001565259.1 4641440 R 398578 CDS YP_001565260.1 160899678 5749832 4642238..4643083 1 NC_010002.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ajs:Ajs_2422 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 4643083 5749832 Daci_4244 Delftia acidovorans SPH-1 4Fe-4S ferredoxin YP_001565260.1 4642238 D 398578 CDS YP_001565261.1 160899679 5749833 4643100..4644143 1 NC_010002.1 PFAM: Polysulphide reductase NrfD; KEGG: ajs:Ajs_2423 polysulphide reductase, NrfD; polysulfide reductase NrfD 4644143 5749833 Daci_4245 Delftia acidovorans SPH-1 polysulfide reductase NrfD YP_001565261.1 4643100 D 398578 CDS YP_001565262.1 160899680 5749834 4644222..4647422 1 NC_010002.1 PFAM: molydopterin dinucleotide-binding region; KEGG: ajs:Ajs_2424 molydopterin dinucleotide-binding region; molydopterin dinucleotide-binding region 4647422 5749834 Daci_4246 Delftia acidovorans SPH-1 molydopterin dinucleotide-binding region YP_001565262.1 4644222 D 398578 CDS YP_001565263.1 160899681 5749835 complement(4647423..4648877) 1 NC_010002.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: swi:Swit_0451 RND efflux system, outer membrane lipoprotein, NodT family; RND efflux system outer membrane lipoprotein 4648877 5749835 Daci_4247 Delftia acidovorans SPH-1 RND efflux system outer membrane lipoprotein YP_001565263.1 4647423 R 398578 CDS YP_001565264.1 160899682 5749836 complement(4648874..4650067) 1 NC_010002.1 PFAM: secretion protein HlyD family protein; KEGG: psa:PST_3103 probable multidrug resistance efflux pump; secretion protein HlyD family protein 4650067 5749836 Daci_4248 Delftia acidovorans SPH-1 secretion protein HlyD family protein YP_001565264.1 4648874 R 398578 CDS YP_001565265.1 160899683 5749837 complement(4650097..4651872) 1 NC_010002.1 PFAM: major facilitator superfamily MFS_1; KEGG: psa:PST_3102 transporter, putative; major facilitator transporter 4651872 5749837 Daci_4249 Delftia acidovorans SPH-1 major facilitator transporter YP_001565265.1 4650097 R 398578 CDS YP_001565266.1 160899684 5749838 complement(4651874..4652464) 1 NC_010002.1 PFAM: regulatory protein TetR; KEGG: xcb:XC_3478 transcriptional regulator TetR/AcrR family; TetR family transcriptional regulator 4652464 5749838 Daci_4250 Delftia acidovorans SPH-1 TetR family transcriptional regulator YP_001565266.1 4651874 R 398578 CDS YP_001565267.1 160899685 5749839 complement(4652529..4653446) 1 NC_010002.1 PFAM: pseudouridine synthase; KEGG: aav:Aave_2674 pseudouridine synthase; pseudouridine synthase 4653446 5749839 Daci_4251 Delftia acidovorans SPH-1 pseudouridine synthase YP_001565267.1 4652529 R 398578 CDS YP_001565268.1 160899686 5749840 complement(4653459..4653875) 1 NC_010002.1 KEGG: mgm:Mmc1_3147 protein of unknown function DUF132; hypothetical protein 4653875 5749840 Daci_4252 Delftia acidovorans SPH-1 hypothetical protein YP_001565268.1 4653459 R 398578 CDS YP_001565269.1 160899687 5749841 complement(4653872..4654099) 1 NC_010002.1 KEGG: cph:Cpha266_2656 hypothetical protein; hypothetical protein 4654099 5749841 Daci_4253 Delftia acidovorans SPH-1 hypothetical protein YP_001565269.1 4653872 R 398578 CDS YP_001565270.1 160899688 5749842 complement(4654164..4654919) 1 NC_010002.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: reh:H16_A0034 transcriptional regulator, GntR-family; GntR family transcriptional regulator 4654919 5749842 Daci_4254 Delftia acidovorans SPH-1 GntR family transcriptional regulator YP_001565270.1 4654164 R 398578 CDS YP_001565271.1 160899689 5749843 4655058..4655852 1 NC_010002.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: reh:H16_A0033 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 4655852 5749843 Daci_4255 Delftia acidovorans SPH-1 short-chain dehydrogenase/reductase SDR YP_001565271.1 4655058 D 398578 CDS YP_001565272.1 160899690 5749844 4655907..4656839 1 NC_010002.1 PFAM: protein of unknown function DUF849; KEGG: reh:H16_A0032 prokaryotic protein of unknown function,predicted cytosolic protein; hypothetical protein 4656839 5749844 Daci_4256 Delftia acidovorans SPH-1 hypothetical protein YP_001565272.1 4655907 D 398578 CDS YP_001565273.1 160899691 5749845 4656951..4658285 1 NC_010002.1 PFAM: major facilitator superfamily MFS_1; KEGG: reh:H16_A0031 MFS transporter, ACS family; major facilitator transporter 4658285 5749845 Daci_4257 Delftia acidovorans SPH-1 major facilitator transporter YP_001565273.1 4656951 D 398578 CDS YP_001565274.1 160899692 5749846 4658334..4660709 1 NC_010002.1 PFAM: AsmA family protein; KEGG: aav:Aave_2673 AsmA family protein; AsmA family protein 4660709 5749846 Daci_4258 Delftia acidovorans SPH-1 AsmA family protein YP_001565274.1 4658334 D 398578 CDS YP_001565275.1 160899693 5749847 4661008..4661424 1 NC_010002.1 PFAM: regulatory protein LysR; KEGG: pol:Bpro_2496 putative transcriptional regulator, ModE family; ModE family transcriptional regulator 4661424 5749847 Daci_4259 Delftia acidovorans SPH-1 ModE family transcriptional regulator YP_001565275.1 4661008 D 398578 CDS YP_001565276.1 160899694 5749848 4661421..4661921 1 NC_010002.1 PFAM: protein of unknown function UPF0066; KEGG: sfu:Sfum_0270 protein of unknown function UPF0066; hypothetical protein 4661921 5749848 Daci_4260 Delftia acidovorans SPH-1 hypothetical protein YP_001565276.1 4661421 D 398578 CDS YP_001565277.1 160899695 5749849 complement(4661951..4665337) 1 NC_010002.1 KEGG: ajs:Ajs_1967 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein; DNA polymerase III subunit alpha 4665337 5749849 Daci_4261 Delftia acidovorans SPH-1 DNA polymerase III subunit alpha YP_001565277.1 4661951 R 398578 CDS YP_001565278.1 160899696 5749850 complement(4665330..4666838) 1 NC_010002.1 KEGG: ajs:Ajs_1966 hypothetical protein; hypothetical protein 4666838 5749850 Daci_4262 Delftia acidovorans SPH-1 hypothetical protein YP_001565278.1 4665330 R 398578 CDS YP_001565279.1 160899697 5749851 complement(4666845..4667729) 1 NC_010002.1 KEGG: aav:Aave_2670 hypothetical protein; hypothetical protein 4667729 5749851 Daci_4263 Delftia acidovorans SPH-1 hypothetical protein YP_001565279.1 4666845 R 398578 CDS YP_001565280.1 160899698 5749852 complement(4667820..4669184) 1 NC_010002.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: ajs:Ajs_1963 metal dependent phosphohydrolase; metal dependent phosphohydrolase 4669184 5749852 Daci_4264 Delftia acidovorans SPH-1 metal dependent phosphohydrolase YP_001565280.1 4667820 R 398578 CDS YP_001565281.1 160899699 5749853 complement(4669287..4669925) 1 NC_010002.1 KEGG: ajs:Ajs_1962 3-oxoacid CoA-transferase, B subunit; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit B 4669925 5749853 Daci_4265 Delftia acidovorans SPH-1 3-oxoacid CoA-transferase subunit B YP_001565281.1 4669287 R 398578 CDS YP_001565282.1 160899700 5749854 complement(4669928..4670635) 1 NC_010002.1 KEGG: aav:Aave_3127 3-oxoacid CoA-transferase, A subunit; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit A 4670635 5749854 Daci_4266 Delftia acidovorans SPH-1 3-oxoacid CoA-transferase subunit A YP_001565282.1 4669928 R 398578 CDS YP_001565283.1 160899701 5749855 4670709..4671251 1 NC_010002.1 KEGG: ajs:Ajs_1960 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: regulatory protein LuxR; PAS fold domain protein; SMART: PAS domain containing protein; LuxR family transcriptional regulator 4671251 5749855 Daci_4267 Delftia acidovorans SPH-1 LuxR family transcriptional regulator YP_001565283.1 4670709 D 398578 CDS YP_001565284.1 160899702 5749856 4671516..4672967 1 NC_010002.1 PFAM: Catalase domain protein; KEGG: ajs:Ajs_1958 catalase; catalase 4672967 5749856 Daci_4268 Delftia acidovorans SPH-1 catalase YP_001565284.1 4671516 D 398578 CDS YP_001565285.1 160899703 5749857 complement(4673034..4673474) 1 NC_010002.1 KEGG: bch:Bcen2424_1345 hypothetical protein; hypothetical protein 4673474 5749857 Daci_4269 Delftia acidovorans SPH-1 hypothetical protein YP_001565285.1 4673034 R 398578 CDS YP_001565286.1 160899704 5749858 complement(4673522..4675543) 1 NC_010002.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bte:BTH_II1273 2,4-dienoyl-CoA reductase; NADH:flavin oxidoreductase 4675543 5749858 Daci_4270 Delftia acidovorans SPH-1 NADH:flavin oxidoreductase YP_001565286.1 4673522 R 398578 CDS YP_001565287.1 160899705 5749859 4675707..4676246 1 NC_010002.1 PFAM: transcriptional regulator PadR family protein; KEGG: bur:Bcep18194_A4476 transcriptional regulator, PadR-like family; PadR-like family transcriptional regulator 4676246 5749859 Daci_4271 Delftia acidovorans SPH-1 PadR-like family transcriptional regulator YP_001565287.1 4675707 D 398578 CDS YP_001565288.1 160899706 5749860 complement(4676304..4677227) 1 NC_010002.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: reu:Reut_B4613 gluconolactonase; SMP-30/gluconolaconase/LRE domain-containing protein 4677227 5749860 Daci_4272 Delftia acidovorans SPH-1 SMP-30/gluconolaconase/LRE domain-containing protein YP_001565288.1 4676304 R 398578 CDS YP_001565289.1 160899707 5749861 complement(4677250..4678140) 1 NC_010002.1 PFAM: amidohydrolase 2; KEGG: bja:blr2281 putative 2-pyrone-4,6-dicarbaxylate hydrolase; amidohydrolase 2 4678140 5749861 Daci_4273 Delftia acidovorans SPH-1 amidohydrolase 2 YP_001565289.1 4677250 R 398578 CDS YP_001565290.1 160899708 5749862 complement(4678145..4679101) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: pna:Pnap_4081 uncharacterized protein UPF0065; hypothetical protein 4679101 5749862 Daci_4274 Delftia acidovorans SPH-1 hypothetical protein YP_001565290.1 4678145 R 398578 CDS YP_001565291.1 160899709 5749863 complement(4679140..4680144) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_1121 uncharacterized protein UPF0065; hypothetical protein 4680144 5749863 Daci_4275 Delftia acidovorans SPH-1 hypothetical protein YP_001565291.1 4679140 R 398578 CDS YP_001565292.1 160899710 5749864 complement(4680215..4681147) 1 NC_010002.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: vei:Veis_3989 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 4681147 5749864 Daci_4276 Delftia acidovorans SPH-1 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_001565292.1 4680215 R 398578 CDS YP_001565293.1 160899711 5749865 complement(4681144..4681830) 1 NC_010002.1 PFAM: Dimethylmenaquinone methyltransferase; KEGG: vei:Veis_3988 dimethylmenaquinone methyltransferase; dimethylmenaquinone methyltransferase 4681830 5749865 Daci_4277 Delftia acidovorans SPH-1 dimethylmenaquinone methyltransferase YP_001565293.1 4681144 R 398578 CDS YP_001565294.1 160899712 5749866 complement(4681879..4682877) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: reu:Reut_B4611 hypothetical protein; hypothetical protein 4682877 5749866 Daci_4278 Delftia acidovorans SPH-1 hypothetical protein YP_001565294.1 4681879 R 398578 CDS YP_001565295.1 160899713 5749867 complement(4682874..4683809) 1 NC_010002.1 PFAM: amidohydrolase 2; KEGG: reu:Reut_B4612 amidohydrolase 2; amidohydrolase 2 4683809 5749867 Daci_4279 Delftia acidovorans SPH-1 amidohydrolase 2 YP_001565295.1 4682874 R 398578 CDS YP_001565296.1 160899714 5749868 complement(4683893..4684894) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: vei:Veis_3985 uncharacterized protein UPF0065; hypothetical protein 4684894 5749868 Daci_4280 Delftia acidovorans SPH-1 hypothetical protein YP_001565296.1 4683893 R 398578 CDS YP_001565297.1 160899715 5749869 4685010..4685810 1 NC_010002.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: vei:Veis_3984 regulatory proteins, IclR; IclR family transcriptional regulator 4685810 5749869 Daci_4281 Delftia acidovorans SPH-1 IclR family transcriptional regulator YP_001565297.1 4685010 D 398578 CDS YP_001565298.1 160899716 5749870 complement(4685851..4687404) 1 NC_010002.1 KEGG: aav:Aave_3131 hypothetical protein; hypothetical protein 4687404 5749870 Daci_4282 Delftia acidovorans SPH-1 hypothetical protein YP_001565298.1 4685851 R 398578 CDS YP_001565299.1 160899717 5749871 complement(4687836..4688738) 1 NC_010002.1 PFAM: alpha/beta hydrolase fold; KEGG: har:HEAR0772 putative haloacetate dehalogenase; alpha/beta hydrolase fold protein 4688738 5749871 Daci_4283 Delftia acidovorans SPH-1 alpha/beta hydrolase fold protein YP_001565299.1 4687836 R 398578 CDS YP_001565300.1 160899718 5749872 4688872..4689798 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_B2273 transcriptional regulator, LysR-family; LysR family transcriptional regulator 4689798 5749872 Daci_4284 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001565300.1 4688872 D 398578 CDS YP_001565301.1 160899719 5749873 4689877..4690500 1 NC_010002.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase; KEGG: ajs:Ajs_1956 uncharacterized peroxidase-related enzyme; hypothetical protein 4690500 5749873 Daci_4285 Delftia acidovorans SPH-1 hypothetical protein YP_001565301.1 4689877 D 398578 CDS YP_001565302.1 160899720 5749874 complement(4690469..4691962) 1 NC_010002.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: mxa:MXAN_7072 transcriptional regulator, GntR family/aminotransferase, classes I and II family protein; transcriptional regulator 4691962 5749874 Daci_4286 Delftia acidovorans SPH-1 transcriptional regulator YP_001565302.1 4690469 R 398578 CDS YP_001565303.1 160899721 5749875 4692059..4692853 1 NC_010002.1 PFAM: N-acetyltransferase; KEGG: cph:Cpha266_1973 N-acetyltransferase; N-acetyltransferase 4692853 5749875 Daci_4287 Delftia acidovorans SPH-1 N-acetyltransferase YP_001565303.1 4692059 D 398578 CDS YP_001565304.1 160899722 5749876 complement(4692858..4693862) 1 NC_010002.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: pol:Bpro_0436 transcriptional regulator, LacI family; LacI family transcriptional regulator 4693862 5749876 Daci_4288 Delftia acidovorans SPH-1 LacI family transcriptional regulator YP_001565304.1 4692858 R 398578 CDS YP_001565305.1 160899723 5749877 4694092..4695060 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: mpt:Mpe_A0969 putative lipoprotein; hypothetical protein 4695060 5749877 Daci_4289 Delftia acidovorans SPH-1 hypothetical protein YP_001565305.1 4694092 D 398578 CDS YP_001565306.1 160899724 5749878 4695104..4696261 1 NC_010002.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: pol:Bpro_0435 mandelate racemase/muconate lactonizing enzyme; mandelate racemase/muconate lactonizing protein 4696261 5749878 Daci_4290 Delftia acidovorans SPH-1 mandelate racemase/muconate lactonizing protein YP_001565306.1 4695104 D 398578 CDS YP_001565307.1 160899725 5749879 4696613..4697134 1 NC_010002.1 KEGG: stm:STM0277 putative cytoplasmic protein; putative cytoplasmic protein 4697134 5749879 Daci_4291 Delftia acidovorans SPH-1 putative cytoplasmic protein YP_001565307.1 4696613 D 398578 CDS YP_001565308.1 160899726 5749880 4697134..4697550 1 NC_010002.1 hypothetical protein 4697550 5749880 Daci_4292 Delftia acidovorans SPH-1 hypothetical protein YP_001565308.1 4697134 D 398578 CDS YP_001565309.1 160899727 5749881 complement(4697598..4698944) 1 NC_010002.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: dar:Daro_0477 helix-turn-helix, fis-type; Fis family two component sigma-54-specific transcriptional regulator 4698944 5749881 Daci_4293 Delftia acidovorans SPH-1 Fis family two component sigma-54-specific transcriptional regulator YP_001565309.1 4697598 R 398578 CDS YP_001565310.1 160899728 5749882 complement(4698941..4700821) 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: dar:Daro_0478 ATP-binding region, ATPase-like:histidine kinase A, N-terminal; histidine kinase 4700821 5749882 Daci_4294 Delftia acidovorans SPH-1 histidine kinase YP_001565310.1 4698941 R 398578 CDS YP_001565311.1 160899729 5749883 complement(4700868..4702340) 1 NC_010002.1 PFAM: sodium:dicarboxylate symporter; KEGG: dar:Daro_0480 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 4702340 5749883 Daci_4295 Delftia acidovorans SPH-1 sodium:dicarboxylate symporter YP_001565311.1 4700868 R 398578 CDS YP_001565312.1 160899730 5749884 4702558..4702683 1 NC_010002.1 hypothetical protein 4702683 5749884 Daci_4296 Delftia acidovorans SPH-1 hypothetical protein YP_001565312.1 4702558 D 398578 CDS YP_001565313.1 160899731 5749885 complement(4702769..4704184) 1 NC_010002.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; CHASE3 domain protein; KEGG: aav:Aave_1956 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 4704184 5749885 Daci_4297 Delftia acidovorans SPH-1 methyl-accepting chemotaxis sensory transducer YP_001565313.1 4702769 R 398578 CDS YP_001565314.1 160899732 5749886 4704255..4704509 1 NC_010002.1 hypothetical protein 4704509 5749886 Daci_4298 Delftia acidovorans SPH-1 hypothetical protein YP_001565314.1 4704255 D 398578 CDS YP_001565315.1 160899733 5749887 4704573..4705586 1 NC_010002.1 PFAM: regulatory protein MerR; KEGG: ajs:Ajs_2972 putative transcriptional regulator, MerR family; regulatory protein MerR 4705586 5749887 Daci_4299 Delftia acidovorans SPH-1 regulatory protein MerR YP_001565315.1 4704573 D 398578 CDS YP_001565316.1 160899734 5749888 4705583..4706179 1 NC_010002.1 PFAM: Lipocalin family protein; KEGG: ajs:Ajs_2973 lipocalin family protein; lipocalin family protein 4706179 5749888 Daci_4300 Delftia acidovorans SPH-1 lipocalin family protein YP_001565316.1 4705583 D 398578 CDS YP_001565317.1 160899735 5749889 4706215..4707234 1 NC_010002.1 KEGG: bvi:Bcep1808_5899 FAD dependent oxidoreductase; FAD dependent oxidoreductase 4707234 5749889 Daci_4301 Delftia acidovorans SPH-1 FAD dependent oxidoreductase YP_001565317.1 4706215 D 398578 CDS YP_001565318.1 160899736 5749890 4707536..4708144 1 NC_010002.1 KEGG: pol:Bpro_1821 putative transmembrane protein; putative transmembrane protein 4708144 5749890 Daci_4302 Delftia acidovorans SPH-1 putative transmembrane protein YP_001565318.1 4707536 D 398578 CDS YP_001565319.1 160899737 5749891 complement(4708231..4708722) 1 NC_010002.1 KEGG: rfr:Rfer_4043 hypothetical protein; hypothetical protein 4708722 5749891 Daci_4303 Delftia acidovorans SPH-1 hypothetical protein YP_001565319.1 4708231 R 398578 CDS YP_001565320.1 160899738 5749892 4708945..4709439 1 NC_010002.1 PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: bmb:BruAb2_0222 transcriptional regulator, MerR family; MerR family transcriptional regulator 4709439 5749892 Daci_4304 Delftia acidovorans SPH-1 MerR family transcriptional regulator YP_001565320.1 4708945 D 398578 CDS YP_001565321.1 160899739 5749893 complement(4709465..4710160) 1 NC_010002.1 PFAM: ThiJ/PfpI domain protein; KEGG: bms:BRA0227 ThiJ/PfpI family protein; ThiJ/PfpI domain-containing protein 4710160 5749893 Daci_4305 Delftia acidovorans SPH-1 ThiJ/PfpI domain-containing protein YP_001565321.1 4709465 R 398578 CDS YP_001565322.1 160899740 5749894 complement(4710157..4711083) 1 NC_010002.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG: pen:PSEEN2714 hypothetical protein; NAD-dependent epimerase/dehydratase 4711083 5749894 Daci_4306 Delftia acidovorans SPH-1 NAD-dependent epimerase/dehydratase YP_001565322.1 4710157 R 398578 CDS YP_001565323.1 160899741 5749895 complement(4711406..4712290) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_4979 transcriptional regulator, LysR family; LysR family transcriptional regulator 4712290 5749895 Daci_4307 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001565323.1 4711406 R 398578 CDS YP_001565324.1 160899742 5749896 4712410..4713384 1 NC_010002.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis; N-acetyl-gamma-glutamyl-phosphate reductase 4713384 5749896 Daci_4308 Delftia acidovorans SPH-1 N-acetyl-gamma-glutamyl-phosphate reductase YP_001565324.1 4712410 D 398578 CDS YP_001565325.1 160899743 5749897 complement(4713533..4714003) 1 NC_010002.1 PFAM: thioesterase superfamily protein; KEGG: vei:Veis_3983 thioesterase superfamily protein; thioesterase superfamily protein 4714003 5749897 Daci_4309 Delftia acidovorans SPH-1 thioesterase superfamily protein YP_001565325.1 4713533 R 398578 CDS YP_001565326.1 160899744 5749898 4714188..4715888 1 NC_010002.1 PFAM: FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: ajs:Ajs_1950 electron-transferring-flavoprotein dehydrogenase; electron-transferring-flavoprotein dehydrogenase 4715888 5749898 Daci_4310 Delftia acidovorans SPH-1 electron-transferring-flavoprotein dehydrogenase YP_001565326.1 4714188 D 398578 CDS YP_001565327.1 160899745 5749899 4716293..4717264 1 NC_010002.1 PFAM: protein of unknown function DUF534; KEGG: ajs:Ajs_1949 protein of unknown function DUF534; hypothetical protein 4717264 5749899 Daci_4311 Delftia acidovorans SPH-1 hypothetical protein YP_001565327.1 4716293 D 398578 CDS YP_001565328.1 160899746 5749900 4717388..4718272 1 NC_010002.1 PFAM: inner-membrane translocator; KEGG: aav:Aave_3142 inner-membrane translocator; inner-membrane translocator 4718272 5749900 Daci_4312 Delftia acidovorans SPH-1 inner-membrane translocator YP_001565328.1 4717388 D 398578 CDS YP_001565329.1 160899747 5749901 4718442..4719236 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_3143 ABC transporter-related protein; ABC transporter-like protein 4719236 5749901 Daci_4313 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001565329.1 4718442 D 398578 CDS YP_001565330.1 160899748 5749902 complement(4719304..4719690) 1 NC_010002.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: kpn:KPN_01138 hypothetical protein; cupin 4719690 5749902 Daci_4314 Delftia acidovorans SPH-1 cupin YP_001565330.1 4719304 R 398578 CDS YP_001565331.1 160899749 5749903 complement(4719767..4720579) 1 NC_010002.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: pau:PA14_32450 putative transcriptional regulator, AraC family; AraC family transcriptional regulator 4720579 5749903 Daci_4315 Delftia acidovorans SPH-1 AraC family transcriptional regulator YP_001565331.1 4719767 R 398578 CDS YP_001565332.1 160899750 5749904 complement(4720640..4722100) 1 NC_010002.1 PFAM: major facilitator superfamily MFS_1; KEGG: pfl:PFL_5203 drug transporter, putative; major facilitator transporter 4722100 5749904 Daci_4316 Delftia acidovorans SPH-1 major facilitator transporter YP_001565332.1 4720640 R 398578 CDS YP_001565333.1 160899751 5749905 4722194..4723084 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfl:PFL_5204 transcriptional regulator, LysR family; LysR family transcriptional regulator 4723084 5749905 Daci_4317 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001565333.1 4722194 D 398578 CDS YP_001565334.1 160899752 5749906 4723340..4724821 1 NC_010002.1 PFAM: amino acid permease-associated region; KEGG: ecx:EcHS_A2291 lysine-specific permease; amino acid permease-associated protein 4724821 5749906 Daci_4318 Delftia acidovorans SPH-1 amino acid permease-associated protein YP_001565334.1 4723340 D 398578 CDS YP_001565335.1 160899753 5749907 complement(4724875..4725231) 1 NC_010002.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ppu:PP_4040 glyoxalase family protein; glyoxalase/bleomycin resistance protein/dioxygenase 4725231 5749907 Daci_4319 Delftia acidovorans SPH-1 glyoxalase/bleomycin resistance protein/dioxygenase YP_001565335.1 4724875 R 398578 CDS YP_001565336.1 160899754 5749908 complement(4725317..4726084) 1 NC_010002.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rle:RL2808 putative transcriptional regulatory protein; AraC family transcriptional regulator 4726084 5749908 Daci_4320 Delftia acidovorans SPH-1 AraC family transcriptional regulator YP_001565336.1 4725317 R 398578 CDS YP_001565337.1 160899755 5749909 complement(4726090..4726545) 1 NC_010002.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: ajs:Ajs_1942 putative transcriptional regulator, AsnC family; AsnC family transcriptional regulator 4726545 5749909 Daci_4321 Delftia acidovorans SPH-1 AsnC family transcriptional regulator YP_001565337.1 4726090 R 398578 CDS YP_001565338.1 160899756 5749910 4726724..4728634 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mfa:Mfla_2395 periplasmic sensor signal transduction histidine kinase; histidine kinase 4728634 5749910 Daci_4322 Delftia acidovorans SPH-1 histidine kinase YP_001565338.1 4726724 D 398578 CDS YP_001565339.1 160899757 5749911 complement(4728686..4729177) 1 NC_010002.1 PFAM: protein of unknown function DUF606; KEGG: ppf:Pput_3106 protein of unknown function DUF606; hypothetical protein 4729177 5749911 Daci_4323 Delftia acidovorans SPH-1 hypothetical protein YP_001565339.1 4728686 R 398578 CDS YP_001565340.1 160899758 5749912 4729276..4730205 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ppf:Pput_3105 transcriptional regulator, LysR family; LysR family transcriptional regulator 4730205 5749912 Daci_4324 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001565340.1 4729276 D 398578 CDS YP_001565341.1 160899759 5749913 complement(4730221..4731825) 1 NC_010002.1 activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 4731825 5749913 Daci_4325 Delftia acidovorans SPH-1 long-chain-fatty-acid--CoA ligase YP_001565341.1 4730221 R 398578 CDS YP_001565342.1 160899760 5749914 4732258..4733433 1 NC_010002.1 TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: aav:Aave_3145 glycine cleavage system T protein; glycine cleavage system T protein 4733433 5749914 Daci_4326 Delftia acidovorans SPH-1 glycine cleavage system T protein YP_001565342.1 4732258 D 398578 CDS YP_001565343.1 160899761 5749915 4733570..4733944 1 NC_010002.1 TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; KEGG: ajs:Ajs_1937 glycine cleavage system H protein; glycine cleavage system H protein 4733944 5749915 Daci_4327 Delftia acidovorans SPH-1 glycine cleavage system H protein YP_001565343.1 4733570 D 398578 CDS YP_001565344.1 160899762 5749916 4734016..4736907 1 NC_010002.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase 4736907 5749916 Daci_4328 Delftia acidovorans SPH-1 glycine dehydrogenase YP_001565344.1 4734016 D 398578 CDS YP_001565345.1 160899763 5749917 4737031..4739280 1 NC_010002.1 KEGG: aav:Aave_3149 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor hybrid histidine kinase 4739280 5749917 Daci_4329 Delftia acidovorans SPH-1 PAS/PAC sensor hybrid histidine kinase YP_001565345.1 4737031 D 398578 CDS YP_001565346.1 160899764 5749918 4739286..4740023 1 NC_010002.1 PFAM: pseudouridine synthase; KEGG: ajs:Ajs_1933 pseudouridine synthase; pseudouridine synthase 4740023 5749918 Daci_4330 Delftia acidovorans SPH-1 pseudouridine synthase YP_001565346.1 4739286 D 398578 CDS YP_001565347.1 160899765 5749919 4740364..4741485 1 NC_010002.1 PFAM: Extracellular ligand-binding receptor; KEGG: ajs:Ajs_3253 extracellular ligand-binding receptor; extracellular ligand-binding receptor 4741485 5749919 Daci_4331 Delftia acidovorans SPH-1 extracellular ligand-binding receptor YP_001565347.1 4740364 D 398578 CDS YP_001565348.1 160899766 5749920 4741583..4742509 1 NC_010002.1 PFAM: inner-membrane translocator; KEGG: ajs:Ajs_3254 inner-membrane translocator; inner-membrane translocator 4742509 5749920 Daci_4332 Delftia acidovorans SPH-1 inner-membrane translocator YP_001565348.1 4741583 D 398578 CDS YP_001565349.1 160899767 5749921 4742509..4743747 1 NC_010002.1 Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine transporter permease subunit 4743747 livM 5749921 livM Delftia acidovorans SPH-1 leucine/isoleucine/valine transporter permease subunit YP_001565349.1 4742509 D 398578 CDS YP_001565350.1 160899768 5749922 4743800..4744567 1 NC_010002.1 Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine transporter ATP-binding subunit 4744567 livG 5749922 livG Delftia acidovorans SPH-1 leucine/isoleucine/valine transporter ATP-binding subunit YP_001565350.1 4743800 D 398578 CDS YP_001565351.1 160899769 5749923 4744567..4745277 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_3257 ABC transporter related; ABC transporter-like protein 4745277 5749923 Daci_4335 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001565351.1 4744567 D 398578 CDS YP_001565352.1 160899770 5749924 4745445..4746356 1 NC_010002.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal; pyridoxal kinase 4746356 pdxK 5749924 pdxK Delftia acidovorans SPH-1 pyridoxal kinase YP_001565352.1 4745445 D 398578 CDS YP_001565353.1 160899771 5749925 4746353..4747129 1 NC_010002.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: aav:Aave_3151 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4747129 5749925 Daci_4337 Delftia acidovorans SPH-1 short-chain dehydrogenase/reductase SDR YP_001565353.1 4746353 D 398578 CDS YP_001565354.1 160899772 5749926 4747390..4748418 1 NC_010002.1 KEGG: spc:Sputcn32_0588 hypothetical protein; hypothetical protein 4748418 5749926 Daci_4338 Delftia acidovorans SPH-1 hypothetical protein YP_001565354.1 4747390 D 398578 CDS YP_001565355.1 160899773 5749927 4748560..4751175 1 NC_010002.1 catalyzes the ATP dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; ATP-dependent DNA ligase 4751175 ligD 5749927 ligD Delftia acidovorans SPH-1 ATP-dependent DNA ligase YP_001565355.1 4748560 D 398578 CDS YP_001565356.1 160899774 5749928 4751210..4752187 1 NC_010002.1 TIGRFAM: Ku protein; PFAM: Ku domain protein; KEGG: ajs:Ajs_2524 Ku domain protein; Ku protein 4752187 5749928 Daci_4340 Delftia acidovorans SPH-1 Ku protein YP_001565356.1 4751210 D 398578 CDS YP_001565357.1 160899775 5749929 4752404..4752616 1 NC_010002.1 KEGG: tet:TTHERM_00163900 Bifunctional endo-1,4-beta-xylanase xylA precursor, putative PROSITE: ASN_RICH GLN_RICH; bifunctional endo-1,4-beta-xylanase xylA 4752616 5749929 Daci_4341 Delftia acidovorans SPH-1 bifunctional endo-1,4-beta-xylanase xylA YP_001565357.1 4752404 D 398578 CDS YP_001565358.1 160899776 5749930 4752769..4754856 1 NC_010002.1 PFAM: Catalase domain protein; KEGG: ajs:Ajs_3310 catalase; catalase 4754856 5749930 Daci_4342 Delftia acidovorans SPH-1 catalase YP_001565358.1 4752769 D 398578 CDS YP_001565359.1 160899777 5749931 4754954..4756351 1 NC_010002.1 KEGG: aav:Aave_1492 putative DNA topoisomerase, type I; putative DNA topoisomerase 4756351 5749931 Daci_4343 Delftia acidovorans SPH-1 putative DNA topoisomerase YP_001565359.1 4754954 D 398578 CDS YP_001565360.1 160899778 5749932 4756483..4758126 1 NC_010002.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: aav:Aave_1901 two component, sigma54 specific, transcriptional regulator, fis family; Fis family two component sigma-54-specific transcriptional regulator 4758126 5749932 Daci_4344 Delftia acidovorans SPH-1 Fis family two component sigma-54-specific transcriptional regulator YP_001565360.1 4756483 D 398578 CDS YP_001565361.1 160899779 5749933 4758194..4758721 1 NC_010002.1 KEGG: mpt:Mpe_A2420 hypothetical protein; hypothetical protein 4758721 5749933 Daci_4345 Delftia acidovorans SPH-1 hypothetical protein YP_001565361.1 4758194 D 398578 CDS YP_001565362.1 160899780 5749934 4758793..4759071 1 NC_010002.1 KEGG: nar:Saro_3185 transglycosylase-associated protein; transglycosylase-associated protein 4759071 5749934 Daci_4346 Delftia acidovorans SPH-1 transglycosylase-associated protein YP_001565362.1 4758793 D 398578 CDS YP_001565363.1 160899781 5749935 complement(4759090..4760667) 1 NC_010002.1 KEGG: rpc:RPC_3208 periplasmic sensor hybrid histidine kinase; hypothetical protein 4760667 5749935 Daci_4347 Delftia acidovorans SPH-1 hypothetical protein YP_001565363.1 4759090 R 398578 CDS YP_001565364.1 160899782 5749936 4760996..4762558 1 NC_010002.1 TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor; sigma-54 factor core-binding region; sigma-54 DNA-binding domain protein; KEGG: tbd:Tbd_0732 RNA polymease sigma-54 factor protein; RNA polymerase sigma 54 subunit RpoN 4762558 5749936 Daci_4348 Delftia acidovorans SPH-1 RNA polymerase sigma 54 subunit RpoN YP_001565364.1 4760996 D 398578 CDS YP_001565365.1 160899783 5749937 4762727..4763053 1 NC_010002.1 KEGG: ajs:Ajs_2974 hypothetical protein; hypothetical protein 4763053 5749937 Daci_4349 Delftia acidovorans SPH-1 hypothetical protein YP_001565365.1 4762727 D 398578 CDS YP_001565366.1 160899784 5749938 4763102..4763296 1 NC_010002.1 hypothetical protein 4763296 5749938 Daci_4350 Delftia acidovorans SPH-1 hypothetical protein YP_001565366.1 4763102 D 398578 CDS YP_001565367.1 160899785 5749939 4763298..4763498 1 NC_010002.1 KEGG: nwi:Nwi_0342 hypothetical protein; hypothetical protein 4763498 5749939 Daci_4351 Delftia acidovorans SPH-1 hypothetical protein YP_001565367.1 4763298 D 398578 CDS YP_001565368.1 160899786 5749940 4763547..4767410 1 NC_010002.1 KEGG: bbt:BBta_5808 putative sensor histidine kinase with multiple PAS and a response regulator receiver domain; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; multi-sensor hybrid histidine kinase 4767410 5749940 Daci_4352 Delftia acidovorans SPH-1 multi-sensor hybrid histidine kinase YP_001565368.1 4763547 D 398578 CDS YP_001565369.1 160899787 5749941 4767478..4768770 1 NC_010002.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 4768770 5749941 Daci_4353 Delftia acidovorans SPH-1 allantoate amidohydrolase YP_001565369.1 4767478 D 398578 CDS YP_001565370.1 160899788 5749942 4769025..4770008 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: aav:Aave_3152 uncharacterized protein UPF0065; hypothetical protein 4770008 5749942 Daci_4354 Delftia acidovorans SPH-1 hypothetical protein YP_001565370.1 4769025 D 398578 CDS YP_001565371.1 160899789 5749943 4770032..4770673 1 NC_010002.1 TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: pau:PA14_42860 putative hemerythrin; hypothetical protein 4770673 5749943 Daci_4355 Delftia acidovorans SPH-1 hypothetical protein YP_001565371.1 4770032 D 398578 CDS YP_001565372.1 160899790 5749944 complement(4770764..4771201) 1 NC_010002.1 PFAM: UspA domain protein; KEGG: aav:Aave_3154 UspA domain protein; UspA domain-containing protein 4771201 5749944 Daci_4356 Delftia acidovorans SPH-1 UspA domain-containing protein YP_001565372.1 4770764 R 398578 CDS YP_001565373.1 160899791 5749945 complement(4771301..4772083) 1 NC_010002.1 KEGG: aav:Aave_3155 hypothetical protein; hypothetical protein 4772083 5749945 Daci_4357 Delftia acidovorans SPH-1 hypothetical protein YP_001565373.1 4771301 R 398578 CDS YP_001565374.1 160899792 5749946 complement(4772204..4773379) 1 NC_010002.1 catalyzes the formation of protocatechuate from 4-hydroxybenzoate; 4-hydroxybenzoate 3-monooxygenase 4773379 5749946 Daci_4358 Delftia acidovorans SPH-1 4-hydroxybenzoate 3-monooxygenase YP_001565374.1 4772204 R 398578 CDS YP_001565375.1 160899793 5749947 4773550..4774332 1 NC_010002.1 TIGRFAM: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family; PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: pol:Bpro_2991 transcriptional regulator, IclR family; IclR family transcriptional regulator 4774332 5749947 Daci_4359 Delftia acidovorans SPH-1 IclR family transcriptional regulator YP_001565375.1 4773550 D 398578 CDS YP_001565376.1 160899794 5749948 complement(4774373..4775272) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rpa:RPA4695 transcriptional regulator LigR, LysR family; LysR family transcriptional regulator 4775272 5749948 Daci_4360 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001565376.1 4774373 R 398578 CDS YP_001565377.1 160899795 5749949 4775476..4776483 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: pol:Bpro_1232 uncharacterized protein UPF0065; hypothetical protein 4776483 5749949 Daci_4361 Delftia acidovorans SPH-1 hypothetical protein YP_001565377.1 4775476 D 398578 CDS YP_001565378.1 160899796 5749950 complement(4776560..4777702) 1 NC_010002.1 PFAM: alanine racemase domain protein; KEGG: bpe:BP0453 low-specificity D-threonine aldolase; alanine racemase domain-containing protein 4777702 5749950 Daci_4362 Delftia acidovorans SPH-1 alanine racemase domain-containing protein YP_001565378.1 4776560 R 398578 CDS YP_001565379.1 160899797 5749951 complement(4777714..4778118) 1 NC_010002.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: ajs:Ajs_3196 glutathione-dependent formaldehyde-activating, GFA; glutathione-dependent formaldehyde-activating protein 4778118 5749951 Daci_4363 Delftia acidovorans SPH-1 glutathione-dependent formaldehyde-activating protein YP_001565379.1 4777714 R 398578 CDS YP_001565380.1 160899798 5749952 4778262..4778609 1 NC_010002.1 SMART: low molecular weight phosphotyrosine protein phosphatase; KEGG: pna:Pnap_2721 low molecular weight phosphotyrosine protein phosphatase; low molecular weight phosphotyrosine protein phosphatase 4778609 5749952 Daci_4364 Delftia acidovorans SPH-1 low molecular weight phosphotyrosine protein phosphatase YP_001565380.1 4778262 D 398578 CDS YP_001565381.1 160899799 5749953 4778667..4782863 1 NC_010002.1 PFAM: protein kinase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; tyrosine protein kinase; serine/threonine protein kinase; KEGG: aav:Aave_3066 serine/threonine protein kinase; serine/threonine protein kinase 4782863 5749953 Daci_4365 Delftia acidovorans SPH-1 serine/threonine protein kinase YP_001565381.1 4778667 D 398578 CDS YP_001565382.1 160899800 5749954 4782881..4783666 1 NC_010002.1 KEGG: aav:Aave_3065 hypothetical protein; hypothetical protein 4783666 5749954 Daci_4366 Delftia acidovorans SPH-1 hypothetical protein YP_001565382.1 4782881 D 398578 CDS YP_001565383.1 160899801 5749955 4783704..4784507 1 NC_010002.1 KEGG: aav:Aave_3064 O-methyltransferase involved in polyketide biosynthesis-like protein; polyketide biosynthesis O-methyltransferase-like protein 4784507 5749955 Daci_4367 Delftia acidovorans SPH-1 polyketide biosynthesis O-methyltransferase-like protein YP_001565383.1 4783704 D 398578 CDS YP_001565384.1 160899802 5749956 4784500..4786683 1 NC_010002.1 PFAM: protein of unknown function DUF181; KEGG: aav:Aave_3061 protein of unknown function DUF181; hypothetical protein 4786683 5749956 Daci_4368 Delftia acidovorans SPH-1 hypothetical protein YP_001565384.1 4784500 D 398578 CDS YP_001565385.1 160899803 5749957 4786803..4787747 1 NC_010002.1 PFAM: Forkhead-associated protein; KEGG: aav:Aave_3060 FHA domain containing protein; FHA domain-containing protein 4787747 5749957 Daci_4369 Delftia acidovorans SPH-1 FHA domain-containing protein YP_001565385.1 4786803 D 398578 CDS YP_001565386.1 160899804 5749958 4787935..4788282 1 NC_010002.1 KEGG: aav:Aave_3059 hypothetical protein; hypothetical protein 4788282 5749958 Daci_4370 Delftia acidovorans SPH-1 hypothetical protein YP_001565386.1 4787935 D 398578 CDS YP_001565387.1 160899805 5749959 4788337..4788786 1 NC_010002.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: ppu:PP_2174 hypothetical protein; glutathione-dependent formaldehyde-activating protein 4788786 5749959 Daci_4371 Delftia acidovorans SPH-1 glutathione-dependent formaldehyde-activating protein YP_001565387.1 4788337 D 398578 CDS YP_001565388.1 160899806 5749960 4789151..4789501 1 NC_010002.1 KEGG: rso:RSc0594 hypothetical protein; hypothetical protein 4789501 5749960 Daci_4372 Delftia acidovorans SPH-1 hypothetical protein YP_001565388.1 4789151 D 398578 CDS YP_001565389.1 160899807 5749961 4789578..4791770 1 NC_010002.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rso:RSc0595 putative outer membrane receptor signal peptide protein; TonB-dependent receptor 4791770 5749961 Daci_4373 Delftia acidovorans SPH-1 TonB-dependent receptor YP_001565389.1 4789578 D 398578 CDS YP_001565390.1 160899808 5749962 4792063..4792656 1 NC_010002.1 hypothetical protein 4792656 5749962 Daci_4374 Delftia acidovorans SPH-1 hypothetical protein YP_001565390.1 4792063 D 398578 CDS YP_001565391.1 160899809 5749963 complement(4792693..4793196) 1 NC_010002.1 KEGG: ppf:Pput_2741 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 4793196 5749963 Daci_4375 Delftia acidovorans SPH-1 N-acetyltransferase GCN5 YP_001565391.1 4792693 R 398578 CDS YP_001565392.1 160899810 5749964 complement(4793328..4793765) 1 NC_010002.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bam:Bamb_6588 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 4793765 5749964 Daci_4376 Delftia acidovorans SPH-1 N-acetyltransferase GCN5 YP_001565392.1 4793328 R 398578 CDS YP_001565393.1 160899811 5749965 complement(4794183..4795124) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B0810 transcriptional regulator, LysR family; LysR family transcriptional regulator 4795124 5749965 Daci_4377 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001565393.1 4794183 R 398578 CDS YP_001565394.1 160899812 5749966 4795228..4796490 1 NC_010002.1 PFAM: monooxygenase FAD-binding; KEGG: bch:Bcen2424_4900 monooxygenase, FAD-binding; monooxygenase FAD-binding 4796490 5749966 Daci_4378 Delftia acidovorans SPH-1 monooxygenase FAD-binding YP_001565394.1 4795228 D 398578 CDS YP_001565395.1 160899813 5749967 4796941..4797321 1 NC_010002.1 KEGG: rso:RSc1866 hypothetical protein; hypothetical protein 4797321 5749967 Daci_4379 Delftia acidovorans SPH-1 hypothetical protein YP_001565395.1 4796941 D 398578 CDS YP_001565396.1 160899814 5749968 complement(4797371..4798657) 1 NC_010002.1 TIGRFAM: arsenical pump membrane protein; PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: ppu:PP_1929 arsenite efflux transporter; arsenical pump membrane protein 4798657 5749968 Daci_4380 Delftia acidovorans SPH-1 arsenical pump membrane protein YP_001565396.1 4797371 R 398578 CDS YP_001565397.1 160899815 5749969 complement(4798734..4799249) 1 NC_010002.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: pna:Pnap_2588 protein tyrosine phosphatase; protein tyrosine phosphatase 4799249 5749969 Daci_4381 Delftia acidovorans SPH-1 protein tyrosine phosphatase YP_001565397.1 4798734 R 398578 CDS YP_001565398.1 160899816 5749970 complement(4799290..4799613) 1 NC_010002.1 SMART: regulatory protein ArsR; KEGG: ajs:Ajs_3055 regulatory protein, ArsR; ArsR family transcriptional regulator 4799613 5749970 Daci_4382 Delftia acidovorans SPH-1 ArsR family transcriptional regulator YP_001565398.1 4799290 R 398578 CDS YP_001565399.1 160899817 5749971 complement(4799780..4800484) 1 NC_010002.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pol:Bpro_0101 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase 4800484 5749971 Daci_4383 Delftia acidovorans SPH-1 short chain dehydrogenase YP_001565399.1 4799780 R 398578 CDS YP_001565400.1 160899818 5749972 complement(4800515..4801516) 1 NC_010002.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pna:Pnap_1291 alcohol dehydrogenase, zinc-binding domain protein; alcohol dehydrogenase 4801516 5749972 Daci_4384 Delftia acidovorans SPH-1 alcohol dehydrogenase YP_001565400.1 4800515 R 398578 CDS YP_001565401.1 160899819 5749973 complement(4801589..4802194) 1 NC_010002.1 PFAM: regulatory protein TetR; KEGG: pna:Pnap_1293 transcriptional regulator, TetR family; TetR family transcriptional regulator 4802194 5749973 Daci_4385 Delftia acidovorans SPH-1 TetR family transcriptional regulator YP_001565401.1 4801589 R 398578 CDS YP_001565402.1 160899820 5749974 4802250..4803575 1 NC_010002.1 PFAM: monooxygenase FAD-binding; KEGG: bra:BRADO0592 putative flavoprotein monooxygenase; hypothetical protein 4803575 5749974 Daci_4386 Delftia acidovorans SPH-1 hypothetical protein YP_001565402.1 4802250 D 398578 CDS YP_001565403.1 160899821 5749975 4803642..4804598 1 NC_010002.1 PFAM: extracellular solute-binding protein family 3; KEGG: aav:Aave_3756 extracellular solute-binding protein, family 3; extracellular solute-binding protein 4804598 5749975 Daci_4387 Delftia acidovorans SPH-1 extracellular solute-binding protein YP_001565403.1 4803642 D 398578 CDS YP_001565404.1 160899822 5749976 4804602..4805264 1 NC_010002.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_3755 polar amino acid ABC transporter, inner membrane subunit; polar amino acid ABC transporter inner membrane protein 4805264 5749976 Daci_4388 Delftia acidovorans SPH-1 polar amino acid ABC transporter inner membrane protein YP_001565404.1 4804602 D 398578 CDS YP_001565405.1 160899823 5749977 4805261..4806061 1 NC_010002.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_3754 polar amino acid ABC transporter, inner membrane subunit; polar amino acid ABC transporter inner membrane protein 4806061 5749977 Daci_4389 Delftia acidovorans SPH-1 polar amino acid ABC transporter inner membrane protein YP_001565405.1 4805261 D 398578 CDS YP_001565406.1 160899824 5749978 4806452..4807000 1 NC_010002.1 KEGG: pmy:Pmen_3752 hypothetical protein; hypothetical protein 4807000 5749978 Daci_4390 Delftia acidovorans SPH-1 hypothetical protein YP_001565406.1 4806452 D 398578 CDS YP_001565407.1 160899825 5749979 4807331..4808494 1 NC_010002.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: aav:Aave_0749 diguanylate cyclase; diguanylate cyclase 4808494 5749979 Daci_4391 Delftia acidovorans SPH-1 diguanylate cyclase YP_001565407.1 4807331 D 398578 CDS YP_001565408.1 160899826 5749980 complement(4808546..4809625) 1 NC_010002.1 PFAM: glycosyl transferase family 9; KEGG: bam:Bamb_5648 glycosyl transferase, family 9; glycosyl transferase family protein 4809625 5749980 Daci_4392 Delftia acidovorans SPH-1 glycosyl transferase family protein YP_001565408.1 4808546 R 398578 CDS YP_001565409.1 160899827 5749981 4809815..4811929 1 NC_010002.1 PFAM: metallophosphoesterase; KEGG: ilo:IL0118 calcineurin-like phosphoesterase; metallophosphoesterase 4811929 5749981 Daci_4393 Delftia acidovorans SPH-1 metallophosphoesterase YP_001565409.1 4809815 D 398578 CDS YP_001565410.1 160899828 5749982 4812156..4812311 1 NC_010002.1 hypothetical protein 4812311 5749982 Daci_4394 Delftia acidovorans SPH-1 hypothetical protein YP_001565410.1 4812156 D 398578 CDS YP_001565411.1 160899829 5749983 4812560..4812961 1 NC_010002.1 PFAM: BLUF domain protein; KEGG: vei:Veis_3097 BLUF domain protein; BLUF domain-containing protein 4812961 5749983 Daci_4395 Delftia acidovorans SPH-1 BLUF domain-containing protein YP_001565411.1 4812560 D 398578 CDS YP_001565412.1 160899830 5749984 4813022..4814806 1 NC_010002.1 PFAM: EAL domain protein; GAF domain protein; SMART: GGDEF domain containing protein; KEGG: aav:Aave_3096 diguanylate phosphodiesterase with GAF sensor; GAF sensor-containing diguanylate cyclase/phosphodiesterase 4814806 5749984 Daci_4396 Delftia acidovorans SPH-1 GAF sensor-containing diguanylate cyclase/phosphodiesterase YP_001565412.1 4813022 D 398578 CDS YP_001565413.1 160899831 5749985 4814962..4815660 1 NC_010002.1 PFAM: protein of unknown function DUF204; KEGG: net:Neut_0042 protein of unknown function DUF204; hypothetical protein 4815660 5749985 Daci_4397 Delftia acidovorans SPH-1 hypothetical protein YP_001565413.1 4814962 D 398578 CDS YP_001565414.1 160899832 5749986 4815825..4816232 1 NC_010002.1 PFAM: PRC-barrel domain protein; KEGG: bch:Bcen2424_5606 PRC-barrel domain protein; PRC-barrel domain-containing protein 4816232 5749986 Daci_4398 Delftia acidovorans SPH-1 PRC-barrel domain-containing protein YP_001565414.1 4815825 D 398578 CDS YP_001565415.1 160899833 5749987 4816419..4816757 1 NC_010002.1 KEGG: bur:Bcep18194_B0749 hypothetical protein; hypothetical protein 4816757 5749987 Daci_4399 Delftia acidovorans SPH-1 hypothetical protein YP_001565415.1 4816419 D 398578 CDS YP_001565416.1 160899834 5749988 complement(4816760..4817695) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_4590 transcriptional regulator, LysR family; LysR family transcriptional regulator 4817695 5749988 Daci_4400 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001565416.1 4816760 R 398578 CDS YP_001565417.1 160899835 5749989 4817762..4819147 1 NC_010002.1 PFAM: major facilitator superfamily MFS_1; KEGG: aav:Aave_4589 major facilitator superfamily MFS_1; major facilitator transporter 4819147 5749989 Daci_4401 Delftia acidovorans SPH-1 major facilitator transporter YP_001565417.1 4817762 D 398578 CDS YP_001565418.1 160899836 5749990 4819144..4819782 1 NC_010002.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pol:Bpro_2663 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA 4819782 5749990 Daci_4402 Delftia acidovorans SPH-1 lysine exporter protein LysE/YggA YP_001565418.1 4819144 D 398578 CDS YP_001565419.1 160899837 5749991 complement(4819898..4820203) 1 NC_010002.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: har:HEAR0067 putative enzyme involved in biosynthesis of extracellular polysaccharides; antibiotic biosynthesis monooxygenase 4820203 5749991 Daci_4403 Delftia acidovorans SPH-1 antibiotic biosynthesis monooxygenase YP_001565419.1 4819898 R 398578 CDS YP_001565420.1 160899838 5749992 complement(4820370..4821383) 1 NC_010002.1 TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pna:Pnap_3909 alcohol dehydrogenase, zinc-binding domain protein; PIG3 family NAD(P)H quinone oxidoreductase 4821383 5749992 Daci_4404 Delftia acidovorans SPH-1 PIG3 family NAD(P)H quinone oxidoreductase YP_001565420.1 4820370 R 398578 CDS YP_001565421.1 160899839 5749993 4821506..4822402 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfo:Pfl_1954 transcriptional regulator, LysR family; LysR family transcriptional regulator 4822402 5749993 Daci_4405 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001565421.1 4821506 D 398578 CDS YP_001565422.1 160899840 5749994 complement(4822374..4824335) 1 NC_010002.1 KEGG: aav:Aave_2975 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor hybrid histidine kinase 4824335 5749994 Daci_4406 Delftia acidovorans SPH-1 multi-sensor hybrid histidine kinase YP_001565422.1 4822374 R 398578 CDS YP_001565423.1 160899841 5749995 complement(4824381..4825241) 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: aav:Aave_2974 histidine kinase; histidine kinase 4825241 5749995 Daci_4407 Delftia acidovorans SPH-1 histidine kinase YP_001565423.1 4824381 R 398578 CDS YP_001565424.1 160899842 5749996 complement(4825238..4826281) 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: aav:Aave_2973 anti-sigma regulatory factor, serine/threonine protein kinase and phosphatase; putative anti-sigma regulatory factor 4826281 5749996 Daci_4408 Delftia acidovorans SPH-1 putative anti-sigma regulatory factor YP_001565424.1 4825238 R 398578 CDS YP_001565425.1 160899843 5749997 complement(4826272..4826676) 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; KEGG: aav:Aave_2972 putative anti-sigma regulatory factor, serine/threonine protein kinase; putative anti-sigma regulatory factor 4826676 5749997 Daci_4409 Delftia acidovorans SPH-1 putative anti-sigma regulatory factor YP_001565425.1 4826272 R 398578 CDS YP_001565426.1 160899844 5749998 complement(4826666..4827040) 1 NC_010002.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: aav:Aave_2971 anti-sigma-factor antagonist; anti-sigma-factor antagonist 4827040 5749998 Daci_4410 Delftia acidovorans SPH-1 anti-sigma-factor antagonist YP_001565426.1 4826666 R 398578 CDS YP_001565427.1 160899845 5749999 complement(4827048..4827890) 1 NC_010002.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: aav:Aave_2970 anti-sigma-factor antagonist; anti-sigma-factor antagonist 4827890 5749999 Daci_4411 Delftia acidovorans SPH-1 anti-sigma-factor antagonist YP_001565427.1 4827048 R 398578 CDS YP_001565428.1 160899846 5750000 4828342..4829043 1 NC_010002.1 PFAM: pentapeptide repeat protein; KEGG: bxe:Bxe_A1294 hypothetical protein; pentapeptide repeat-containing protein 4829043 5750000 Daci_4412 Delftia acidovorans SPH-1 pentapeptide repeat-containing protein YP_001565428.1 4828342 D 398578 CDS YP_001565429.1 160899847 5750001 complement(4829079..4830116) 1 NC_010002.1 KEGG: gga:396544 nascent polypeptide-associated complex alpha subunit; hypothetical protein 4830116 5750001 Daci_4413 Delftia acidovorans SPH-1 hypothetical protein YP_001565429.1 4829079 R 398578 CDS YP_001565430.1 160899848 5750002 4830153..4831709 1 NC_010002.1 PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: bxe:Bxe_B2784 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 4831709 5750002 Daci_4414 Delftia acidovorans SPH-1 methyl-accepting chemotaxis sensory transducer YP_001565430.1 4830153 D 398578 CDS YP_001565431.1 160899849 5750003 4831736..4832041 1 NC_010002.1 PFAM: NIPSNAP family containing protein; KEGG: bur:Bcep18194_B0447 protein of unknown function DUF1099; NIPSNAP family protein 4832041 5750003 Daci_4415 Delftia acidovorans SPH-1 NIPSNAP family protein YP_001565431.1 4831736 D 398578 CDS YP_001565432.1 160899850 5750004 4832154..4833146 1 NC_010002.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: pde:Pden_4109 putative sulfonate/nitrate transport system substrate-binding protein; glycine betaine ABC transporter substrate-binding protein 4833146 5750004 Daci_4416 Delftia acidovorans SPH-1 glycine betaine ABC transporter substrate-binding protein YP_001565432.1 4832154 D 398578 CDS YP_001565433.1 160899851 5750006 4834025..4834750 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pde:Pden_4107 ABC transporter related; ABC transporter-like protein 4834750 5750006 Daci_4418 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001565433.1 4834025 D 398578 CDS YP_001565434.1 160899852 5750007 4834798..4836165 1 NC_010002.1 KEGG: pde:Pden_4106 nitrilotriacetate monooxygenase; nitrilotriacetate monooxygenase 4836165 5750007 Daci_4419 Delftia acidovorans SPH-1 nitrilotriacetate monooxygenase YP_001565434.1 4834798 D 398578 CDS YP_001565435.1 160899853 5750008 complement(4836197..4837090) 1 NC_010002.1 PFAM: extracellular solute-binding protein family 3; KEGG: ajs:Ajs_0608 extracellular solute-binding protein, family 3; extracellular solute-binding protein 4837090 5750008 Daci_4420 Delftia acidovorans SPH-1 extracellular solute-binding protein YP_001565435.1 4836197 R 398578 CDS YP_001565436.1 160899854 5750009 4837272..4838246 1 NC_010002.1 TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: pol:Bpro_3541 Mg2+ transporter protein, CorA-like; magnesium and cobalt transport protein CorA 4838246 5750009 Daci_4421 Delftia acidovorans SPH-1 magnesium and cobalt transport protein CorA YP_001565436.1 4837272 D 398578 CDS YP_001565437.1 160899855 5750010 4838291..4839307 1 NC_010002.1 PFAM: protein of unknown function DUF344; KEGG: vei:Veis_1774 protein of unknown function DUF344; hypothetical protein 4839307 5750010 Daci_4422 Delftia acidovorans SPH-1 hypothetical protein YP_001565437.1 4838291 D 398578 CDS YP_001565438.1 160899856 5750011 complement(4839368..4845418) 1 NC_010002.1 PFAM: protein of unknown function DUF559; KEGG: rfr:Rfer_3040 DNA helicase related protein; hypothetical protein 4845418 5750011 Daci_4423 Delftia acidovorans SPH-1 hypothetical protein YP_001565438.1 4839368 R 398578 CDS YP_001565439.1 160899857 5750012 complement(4845616..4845861) 1 NC_010002.1 PFAM: protein of unknown function DUF156; KEGG: aha:AHA_0625 hypothetical protein; hypothetical protein 4845861 5750012 Daci_4424 Delftia acidovorans SPH-1 hypothetical protein YP_001565439.1 4845616 R 398578 CDS YP_001565440.1 160899858 5750013 4845937..4846992 1 NC_010002.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: pae:PA1297 probable metal transporter; cation diffusion facilitator family transporter 4846992 5750013 Daci_4425 Delftia acidovorans SPH-1 cation diffusion facilitator family transporter YP_001565440.1 4845937 D 398578 CDS YP_001565441.1 160899859 5750014 complement(4846995..4848665) 1 NC_010002.1 PFAM: extracellular solute-binding protein family 5; KEGG: sit:TM1040_3144 extracellular solute-binding protein, family 5; extracellular solute-binding protein 4848665 5750014 Daci_4426 Delftia acidovorans SPH-1 extracellular solute-binding protein YP_001565441.1 4846995 R 398578 CDS YP_001565442.1 160899860 5750015 complement(4848781..4850424) 1 NC_010002.1 PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: rru:Rru_A0138 leucyl aminopeptidase; leucyl aminopeptidase 4850424 5750015 Daci_4427 Delftia acidovorans SPH-1 leucyl aminopeptidase YP_001565442.1 4848781 R 398578 CDS YP_001565443.1 160899861 5750016 4850509..4850847 1 NC_010002.1 KEGG: oan:Oant_0082 hypothetical protein; hypothetical protein 4850847 5750016 Daci_4428 Delftia acidovorans SPH-1 hypothetical protein YP_001565443.1 4850509 D 398578 CDS YP_001565444.1 160899862 5750017 complement(4850903..4851577) 1 NC_010002.1 PFAM: Dimethylmenaquinone methyltransferase; KEGG: bra:BRADO3859 putative demethylmenaquinone methyltransferase; hypothetical protein 4851577 5750017 Daci_4429 Delftia acidovorans SPH-1 hypothetical protein YP_001565444.1 4850903 R 398578 CDS YP_001565445.1 160899863 5750018 complement(4851618..4852604) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: reu:Reut_B4610 hypothetical protein; hypothetical protein 4852604 5750018 Daci_4430 Delftia acidovorans SPH-1 hypothetical protein YP_001565445.1 4851618 R 398578 CDS YP_001565446.1 160899864 5750019 complement(4852652..4853512) 1 NC_010002.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: pna:Pnap_0601 6-phosphogluconate dehydrogenase, NAD-binding; 6-phosphogluconate dehydrogenase 4853512 5750019 Daci_4431 Delftia acidovorans SPH-1 6-phosphogluconate dehydrogenase YP_001565446.1 4852652 R 398578 CDS YP_001565447.1 160899865 5750020 4853727..4854383 1 NC_010002.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pna:Pnap_0602 transcriptional regulator, GntR family; GntR family transcriptional regulator 4854383 5750020 Daci_4432 Delftia acidovorans SPH-1 GntR family transcriptional regulator YP_001565447.1 4853727 D 398578 CDS YP_001565448.1 160899866 5750021 complement(4854390..4855637) 1 NC_010002.1 PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_5897 major facilitator superfamily MFS_1; major facilitator transporter 4855637 5750021 Daci_4433 Delftia acidovorans SPH-1 major facilitator transporter YP_001565448.1 4854390 R 398578 CDS YP_001565449.1 160899867 5750022 complement(4855722..4856159) 1 NC_010002.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 4856159 5750022 Daci_4434 Delftia acidovorans SPH-1 3-dehydroquinate dehydratase YP_001565449.1 4855722 R 398578 CDS YP_001565450.1 160899868 5750023 complement(4856216..4857274) 1 NC_010002.1 PFAM: oxidoreductase domain protein; dihydrodipicolinate reductase; Oxidoreductase domain; homoserine dehydrogenase NAD-binding; KEGG: pol:Bpro_4498 oxidoreductase-like; oxidoreductase domain-containing protein 4857274 5750023 Daci_4435 Delftia acidovorans SPH-1 oxidoreductase domain-containing protein YP_001565450.1 4856216 R 398578 CDS YP_001565451.1 160899869 5750024 complement(4857286..4858437) 1 NC_010002.1 PFAM: porin Gram-negative type; KEGG: bxe:Bxe_C0935 outer membrane porin, OmpC family; porin 4858437 5750024 Daci_4436 Delftia acidovorans SPH-1 porin YP_001565451.1 4857286 R 398578 CDS YP_001565452.1 160899870 5750025 complement(4858529..4859362) 1 NC_010002.1 PFAM: UBA/THIF-type NAD/FAD binding protein; Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; KEGG: reu:Reut_B5029 shikimate 5-dehydrogenase; shikimate dehydrogenase 4859362 5750025 Daci_4437 Delftia acidovorans SPH-1 shikimate dehydrogenase YP_001565452.1 4858529 R 398578 CDS YP_001565453.1 160899871 5750026 complement(4859411..4860805) 1 NC_010002.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bja:bll5462 hypothetical metabolite transport protein; major facilitator transporter 4860805 5750026 Daci_4438 Delftia acidovorans SPH-1 major facilitator transporter YP_001565453.1 4859411 R 398578 CDS YP_001565454.1 160899872 5750027 4860992..4861762 1 NC_010002.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: pol:Bpro_1846 transcriptional regulator, IclR family; IclR family transcriptional regulator 4861762 5750027 Daci_4439 Delftia acidovorans SPH-1 IclR family transcriptional regulator YP_001565454.1 4860992 D 398578 CDS YP_001565455.1 160899873 5750028 4861762..4862217 1 NC_010002.1 KEGG: spe:Spro_2447 putative RNase H; hypothetical protein 4862217 5750028 Daci_4440 Delftia acidovorans SPH-1 hypothetical protein YP_001565455.1 4861762 D 398578 CDS YP_001565456.1 160899874 5750029 complement(4862234..4863259) 1 NC_010002.1 PFAM: aldo/keto reductase; KEGG: rfr:Rfer_0302 aldo/keto reductase; aldo/keto reductase 4863259 5750029 Daci_4441 Delftia acidovorans SPH-1 aldo/keto reductase YP_001565456.1 4862234 R 398578 CDS YP_001565457.1 160899875 5750030 complement(4863332..4864228) 1 NC_010002.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: pna:Pnap_1656 xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein 4864228 5750030 Daci_4442 Delftia acidovorans SPH-1 xylose isomerase domain-containing protein YP_001565457.1 4863332 R 398578 CDS YP_001565458.1 160899876 5750031 complement(4864306..4865190) 1 NC_010002.1 KEGG: pol:Bpro_1853 4-hydroxyphenylpyruvate dioxygenase; 4-hydroxyphenylpyruvate dioxygenase 4865190 5750031 Daci_4443 Delftia acidovorans SPH-1 4-hydroxyphenylpyruvate dioxygenase YP_001565458.1 4864306 R 398578 CDS YP_001565459.1 160899877 5750032 complement(4865242..4866201) 1 NC_010002.1 PFAM: Semialdehyde dehydrogenase NAD - binding; oxidoreductase domain protein; Oxidoreductase domain; KEGG: bra:BRADO2343 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase; oxidoreductase domain-containing protein 4866201 5750032 Daci_4444 Delftia acidovorans SPH-1 oxidoreductase domain-containing protein YP_001565459.1 4865242 R 398578 CDS YP_001565460.1 160899878 5750033 complement(4866284..4867153) 1 NC_010002.1 extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols; part of the bacterial aromatic compound degradation pathway; protocatechuate 4,5-dioxygenase subunit beta 4867153 5750033 Daci_4445 Delftia acidovorans SPH-1 protocatechuate 4,5-dioxygenase subunit beta YP_001565460.1 4866284 R 398578 CDS YP_001565461.1 160899879 5750034 complement(4867155..4867613) 1 NC_010002.1 extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols; part of the bacterial aromatic compound degradation pathway; protocatechuate 4,5-dioxygenase subunit alpha 4867613 5750034 Daci_4446 Delftia acidovorans SPH-1 protocatechuate 4,5-dioxygenase subunit alpha YP_001565461.1 4867155 R 398578 CDS YP_001565462.1 160899880 5750035 complement(4867662..4868579) 1 NC_010002.1 PFAM: amidohydrolase 2; KEGG: azo:azo2539 probable 2-pyrone-4,6-dicarboxylate hydrolase; amidohydrolase 2 4868579 5750035 Daci_4447 Delftia acidovorans SPH-1 amidohydrolase 2 YP_001565462.1 4867662 R 398578 CDS YP_001565463.1 160899881 5750036 complement(4868590..4869273) 1 NC_010002.1 TIGRFAM: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase; PFAM: Dimethylmenaquinone methyltransferase; KEGG: pol:Bpro_4321 dimethylmenaquinone methyltransferase; hypothetical protein 4869273 5750036 Daci_4448 Delftia acidovorans SPH-1 hypothetical protein YP_001565463.1 4868590 R 398578 CDS YP_001565464.1 160899882 5750037 complement(4869307..4870335) 1 NC_010002.1 PFAM: amidohydrolase 2; KEGG: pna:Pnap_2032 amidohydrolase 2; amidohydrolase 2 4870335 5750037 Daci_4449 Delftia acidovorans SPH-1 amidohydrolase 2 YP_001565464.1 4869307 R 398578 CDS YP_001565465.1 160899883 5750038 complement(4870385..4871767) 1 NC_010002.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: azo:azo2543 putative 4-hydroxybenzoate transporter protein; major facilitator transporter 4871767 5750038 Daci_4450 Delftia acidovorans SPH-1 major facilitator transporter YP_001565465.1 4870385 R 398578 CDS YP_001565466.1 160899884 5750039 complement(4871869..4873035) 1 NC_010002.1 PFAM: protein of unknown function DUF453; KEGG: pna:Pnap_2033 protein of unknown function DUF453; hypothetical protein 4873035 5750039 Daci_4451 Delftia acidovorans SPH-1 hypothetical protein YP_001565466.1 4871869 R 398578 CDS YP_001565467.1 160899885 5750040 complement(4873174..4873791) 1 NC_010002.1 KEGG: ajs:Ajs_1927 hypothetical protein; hypothetical protein 4873791 5750040 Daci_4452 Delftia acidovorans SPH-1 hypothetical protein YP_001565467.1 4873174 R 398578 CDS YP_001565468.1 160899886 5750041 complement(4873877..4874887) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: reu:Reut_B3798 hypothetical protein; hypothetical protein 4874887 5750041 Daci_4453 Delftia acidovorans SPH-1 hypothetical protein YP_001565468.1 4873877 R 398578 CDS YP_001565469.1 160899887 5750042 complement(4874884..4875798) 1 NC_010002.1 PFAM: amidohydrolase 2; KEGG: rso:RS05190 probable hydrolase transmembrane protein; amidohydrolase 2 4875798 5750042 Daci_4454 Delftia acidovorans SPH-1 amidohydrolase 2 YP_001565469.1 4874884 R 398578 CDS YP_001565470.1 160899888 5750043 4875870..4876757 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B1617 transcriptional regulator, LysR family; LysR family transcriptional regulator 4876757 5750043 Daci_4455 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001565470.1 4875870 D 398578 CDS YP_001565471.1 160899889 5750044 4876903..4877679 1 NC_010002.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: aha:AHA_1994 glucose 1-dehydrogenase; short chain dehydrogenase 4877679 5750044 Daci_4456 Delftia acidovorans SPH-1 short chain dehydrogenase YP_001565471.1 4876903 D 398578 CDS YP_001565472.1 160899890 5750045 complement(4877748..4878263) 1 NC_010002.1 KEGG: aav:Aave_0497 rhs element Vgr protein; rhs element Vgr protein 4878263 5750045 Daci_4457 Delftia acidovorans SPH-1 rhs element Vgr protein YP_001565472.1 4877748 R 398578 CDS YP_001565473.1 160899891 5750046 4878917..4879342 1 NC_010002.1 PFAM: ferric-uptake regulator; KEGG: vei:Veis_3389 ferric uptake regulator, Fur family; ferric uptake regulator family protein 4879342 5750046 Daci_4458 Delftia acidovorans SPH-1 ferric uptake regulator family protein YP_001565473.1 4878917 D 398578 CDS YP_001565474.1 160899892 5750047 complement(4879457..4880821) 1 NC_010002.1 KEGG: ccr:CC_1520 hypothetical protein; hypothetical protein 4880821 5750047 Daci_4459 Delftia acidovorans SPH-1 hypothetical protein YP_001565474.1 4879457 R 398578 CDS YP_001565475.1 160899893 5750048 complement(4880818..4882245) 1 NC_010002.1 KEGG: xom:XOO_0574 hypothetical protein; hypothetical protein 4882245 5750048 Daci_4460 Delftia acidovorans SPH-1 hypothetical protein YP_001565475.1 4880818 R 398578 CDS YP_001565476.1 160899894 5750049 complement(4882242..4883063) 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ccr:CC_1518 ABC transporter, ATP-binding protein; ABC transporter-like protein 4883063 5750049 Daci_4461 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001565476.1 4882242 R 398578 CDS YP_001565477.1 160899895 5750050 complement(4883072..4885345) 1 NC_010002.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: aav:Aave_4000 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 4885345 5750050 Daci_4462 Delftia acidovorans SPH-1 TonB-dependent siderophore receptor YP_001565477.1 4883072 R 398578 CDS YP_001565478.1 160899896 5750051 complement(4885400..4885789) 1 NC_010002.1 hypothetical protein 4885789 5750051 Daci_4463 Delftia acidovorans SPH-1 hypothetical protein YP_001565478.1 4885400 R 398578 CDS YP_001565479.1 160899897 5750052 complement(4885924..4886538) 1 NC_010002.1 PFAM: regulatory protein TetR; KEGG: bbr:BB0627 hypothetical protein; TetR family transcriptional regulator 4886538 5750052 Daci_4464 Delftia acidovorans SPH-1 TetR family transcriptional regulator YP_001565479.1 4885924 R 398578 CDS YP_001565480.1 160899898 5750053 4887306..4887584 1 NC_010002.1 PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: aav:Aave_2580 histone family protein nucleoid-structuring protein H-NS; histone family protein nucleoid-structuring protein H-NS 4887584 5750053 Daci_4465 Delftia acidovorans SPH-1 histone family protein nucleoid-structuring protein H-NS YP_001565480.1 4887306 D 398578 CDS YP_001565481.1 160899899 5750054 complement(4887639..4888043) 1 NC_010002.1 PFAM: Endoribonuclease L-PSP; KEGG: bbr:BB4411 hypothetical protein; endoribonuclease L-PSP 4888043 5750054 Daci_4466 Delftia acidovorans SPH-1 endoribonuclease L-PSP YP_001565481.1 4887639 R 398578 CDS YP_001565482.1 160899900 5750055 complement(4888048..4888500) 1 NC_010002.1 PFAM: thioesterase superfamily protein; KEGG: bbr:BB4412 probable 4-hydroxybenzoyl CoA thioesterase; thioesterase superfamily protein 4888500 5750055 Daci_4467 Delftia acidovorans SPH-1 thioesterase superfamily protein YP_001565482.1 4888048 R 398578 CDS YP_001565483.1 160899901 5750056 complement(4888510..4890150) 1 NC_010002.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bbr:BB4413 probable acid-coenzyme A ligase; AMP-dependent synthetase/ligase 4890150 5750056 Daci_4468 Delftia acidovorans SPH-1 AMP-dependent synthetase/ligase YP_001565483.1 4888510 R 398578 CDS YP_001565484.1 160899902 5750057 complement(4890192..4891361) 1 NC_010002.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bbr:BB4414 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 4891361 5750057 Daci_4469 Delftia acidovorans SPH-1 acyl-CoA dehydrogenase domain-containing protein YP_001565484.1 4890192 R 398578 CDS YP_001565485.1 160899903 5750058 complement(4891364..4892221) 1 NC_010002.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 4892221 5750058 Daci_4470 Delftia acidovorans SPH-1 enoyl-CoA hydratase YP_001565485.1 4891364 R 398578 CDS YP_001565486.1 160899904 5750059 complement(4892267..4893079) 1 NC_010002.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bbr:BB4416 probable short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 4893079 5750059 Daci_4471 Delftia acidovorans SPH-1 short-chain dehydrogenase/reductase SDR YP_001565486.1 4892267 R 398578 CDS YP_001565487.1 160899905 5750060 complement(4893076..4895424) 1 NC_010002.1 catalyzes the conversion of salicylyl-CoA to gentisyl-CoA; salicylyl-CoA 5-hydroxylase 4895424 5750060 Daci_4472 Delftia acidovorans SPH-1 salicylyl-CoA 5-hydroxylase YP_001565487.1 4893076 R 398578 CDS YP_001565488.1 160899906 5750061 4895612..4895866 1 NC_010002.1 KEGG: rso:RS01914 hypothetical protein; hypothetical protein 4895866 5750061 Daci_4473 Delftia acidovorans SPH-1 hypothetical protein YP_001565488.1 4895612 D 398578 CDS YP_001565489.1 160899907 5750062 4895863..4896609 1 NC_010002.1 KEGG: bur:Bcep18194_B2831 hypothetical protein; hypothetical protein 4896609 5750062 Daci_4474 Delftia acidovorans SPH-1 hypothetical protein YP_001565489.1 4895863 D 398578 CDS YP_001565490.1 160899908 5750063 complement(4896629..4897030) 1 NC_010002.1 KEGG: pol:Bpro_3606 hypothetical protein; hypothetical protein 4897030 5750063 Daci_4475 Delftia acidovorans SPH-1 hypothetical protein YP_001565490.1 4896629 R 398578 CDS YP_001565491.1 160899909 5750064 complement(4897737..4898162) 1 NC_010002.1 hypothetical protein 4898162 5750064 Daci_4476 Delftia acidovorans SPH-1 hypothetical protein YP_001565491.1 4897737 R 398578 CDS YP_001565492.1 160899910 5750065 complement(4898312..4898650) 1 NC_010002.1 KEGG: aav:Aave_3790 transposase, IS4 family protein; transposase, IS4 family protein 4898650 5750065 Daci_4477 Delftia acidovorans SPH-1 transposase, IS4 family protein YP_001565492.1 4898312 R 398578 CDS YP_001565493.1 160899911 5750066 complement(4898710..4899135) 1 NC_010002.1 KEGG: aav:Aave_3789 putative TIS1421-transposase orfA protein; putative TIS1421-transposase orfA protein 4899135 5750066 Daci_4478 Delftia acidovorans SPH-1 putative TIS1421-transposase orfA protein YP_001565493.1 4898710 R 398578 CDS YP_001565494.1 160899912 5750068 complement(4899467..4899580) 1 NC_010002.1 hypothetical protein 4899580 5750068 Daci_4480 Delftia acidovorans SPH-1 hypothetical protein YP_001565494.1 4899467 R 398578 CDS YP_001565495.1 160899913 5750069 complement(4899734..4900324) 1 NC_010002.1 KEGG: aav:Aave_4284 hypothetical protein; hypothetical protein 4900324 5750069 Daci_4481 Delftia acidovorans SPH-1 hypothetical protein YP_001565495.1 4899734 R 398578 CDS YP_001565496.1 160899914 5750070 complement(4900303..4904889) 1 NC_010002.1 TIGRFAM: YD repeat protein; PFAM: RHS protein; YD repeat-containing protein; KEGG: aav:Aave_4283 YD repeat protein; YD repeat-containing protein 4904889 5750070 Daci_4482 Delftia acidovorans SPH-1 YD repeat-containing protein YP_001565496.1 4900303 R 398578 CDS YP_001565497.1 160899915 5750071 complement(4904968..4907304) 1 NC_010002.1 TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; KEGG: aav:Aave_2735 rhs element Vgr protein; ImpA family type VI secretion-associated protein 4907304 5750071 Daci_4483 Delftia acidovorans SPH-1 ImpA family type VI secretion-associated protein YP_001565497.1 4904968 R 398578 CDS YP_001565498.1 160899916 5750072 complement(4907540..4908253) 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bpe:BP0305 high-affinity branched-chain amino acid transporter, ATP-binding protein; ABC transporter-like protein 4908253 5750072 Daci_4484 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001565498.1 4907540 R 398578 CDS YP_001565499.1 160899917 5750073 complement(4908253..4909047) 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbr:BB4419 putative branched-chain amino acid transporter, ATP-binding protein; ABC transporter-like protein 4909047 5750073 Daci_4485 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001565499.1 4908253 R 398578 CDS YP_001565500.1 160899918 5750074 complement(4909044..4910006) 1 NC_010002.1 PFAM: inner-membrane translocator; KEGG: bbr:BB4420 probable branched-chain amino acid transport system, permease component; inner-membrane translocator 4910006 5750074 Daci_4486 Delftia acidovorans SPH-1 inner-membrane translocator YP_001565500.1 4909044 R 398578 CDS YP_001565501.1 160899919 5750075 complement(4910009..4910929) 1 NC_010002.1 PFAM: inner-membrane translocator; KEGG: bbr:BB4421 probable branched-chain amino acid transport system, permease component; inner-membrane translocator 4910929 5750075 Daci_4487 Delftia acidovorans SPH-1 inner-membrane translocator YP_001565501.1 4910009 R 398578 CDS YP_001565502.1 160899920 5750076 complement(4911040..4912215) 1 NC_010002.1 PFAM: Extracellular ligand-binding receptor; KEGG: bbr:BB4422 putative ABC transporter substrate binding protein; extracellular ligand-binding receptor 4912215 5750076 Daci_4488 Delftia acidovorans SPH-1 extracellular ligand-binding receptor YP_001565502.1 4911040 R 398578 CDS YP_001565503.1 160899921 5750077 4912413..4913318 1 NC_010002.1 KEGG: bpe:BP0300 putative esterase; putative esterase 4913318 5750077 Daci_4489 Delftia acidovorans SPH-1 putative esterase YP_001565503.1 4912413 D 398578 CDS YP_001565504.1 160899922 5750078 4913315..4913803 1 NC_010002.1 PFAM: regulatory protein MarR; KEGG: bbr:BB4424 MarR-family transcriptional regulator; MarR family transcriptional regulator 4913803 5750078 Daci_4490 Delftia acidovorans SPH-1 MarR family transcriptional regulator YP_001565504.1 4913315 D 398578 CDS YP_001565505.1 160899923 5750079 complement(4913826..4915421) 1 NC_010002.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pfo:Pfl_2295 putative diguanylate cyclase (GGDEF domain); diguanylate cyclase 4915421 5750079 Daci_4491 Delftia acidovorans SPH-1 diguanylate cyclase YP_001565505.1 4913826 R 398578 CDS YP_001565506.1 160899924 5750080 4915915..4916130 1 NC_010002.1 hypothetical protein 4916130 5750080 Daci_4492 Delftia acidovorans SPH-1 hypothetical protein YP_001565506.1 4915915 D 398578 CDS YP_001565507.1 160899925 5750081 complement(4916208..4917653) 1 NC_010002.1 PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: aav:Aave_4245 DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase 4917653 5750081 Daci_4493 Delftia acidovorans SPH-1 DEAD/DEAH box helicase YP_001565507.1 4916208 R 398578 CDS YP_001565508.1 160899926 5750082 4917961..4919868 1 NC_010002.1 PFAM: Protein of unknown function DUF1800; KEGG: aav:Aave_4704 hypothetical protein; hypothetical protein 4919868 5750082 Daci_4494 Delftia acidovorans SPH-1 hypothetical protein YP_001565508.1 4917961 D 398578 CDS YP_001565509.1 160899927 5750083 4919924..4921372 1 NC_010002.1 PFAM: protein of unknown function DUF1501; KEGG: aav:Aave_4705 protein of unknown function DUF1501; hypothetical protein 4921372 5750083 Daci_4495 Delftia acidovorans SPH-1 hypothetical protein YP_001565509.1 4919924 D 398578 CDS YP_001565510.1 160899928 5750084 complement(4921419..4922315) 1 NC_010002.1 KEGG: bam:Bamb_6421 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein; 2-dehydropantoate 2-reductase 4922315 5750084 Daci_4496 Delftia acidovorans SPH-1 2-dehydropantoate 2-reductase YP_001565510.1 4921419 R 398578 CDS YP_001565511.1 160899929 5750085 complement(4922376..4923485) 1 NC_010002.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: pfl:PFL_2354 hypothetical protein; hypothetical protein 4923485 5750085 Daci_4497 Delftia acidovorans SPH-1 hypothetical protein YP_001565511.1 4922376 R 398578 CDS YP_001565512.1 160899930 5750086 4923561..4923950 1 NC_010002.1 PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: pfl:PFL_2355 transcriptional regulator, MerR family; MerR family transcriptional regulator 4923950 5750086 Daci_4498 Delftia acidovorans SPH-1 MerR family transcriptional regulator YP_001565512.1 4923561 D 398578 CDS YP_001565513.1 160899931 5750087 4924047..4924460 1 NC_010002.1 KEGG: sal:Sala_3163 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 4924460 5750087 Daci_4499 Delftia acidovorans SPH-1 glyoxalase/bleomycin resistance protein/dioxygenase YP_001565513.1 4924047 D 398578 CDS YP_001565514.1 160899932 5750088 4924587..4925813 1 NC_010002.1 PFAM: glucose sorbosone dehydrogenase; KEGG: sus:Acid_1883 glucose sorbosone dehydrogenase; glucose sorbosone dehydrogenase 4925813 5750088 Daci_4500 Delftia acidovorans SPH-1 glucose sorbosone dehydrogenase YP_001565514.1 4924587 D 398578 CDS YP_001565515.1 160899933 5750089 complement(4925889..4926122) 1 NC_010002.1 KEGG: ajs:Ajs_4147 hypothetical protein; hypothetical protein 4926122 5750089 Daci_4501 Delftia acidovorans SPH-1 hypothetical protein YP_001565515.1 4925889 R 398578 CDS YP_001565516.1 160899934 5750090 4926298..4927680 1 NC_010002.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: rme:Rmet_5794 transcriptional regulator, GntR family; transcriptional regulator 4927680 5750090 Daci_4502 Delftia acidovorans SPH-1 transcriptional regulator YP_001565516.1 4926298 D 398578 CDS YP_001565517.1 160899935 5750091 complement(4927811..4928527) 1 NC_010002.1 TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; KEGG: pfl:PFL_2830 aspartate racemase; aspartate racemase 4928527 5750091 Daci_4503 Delftia acidovorans SPH-1 aspartate racemase YP_001565517.1 4927811 R 398578 CDS YP_001565518.1 160899936 5750092 4928544..4928960 1 NC_010002.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pfl:PFL_2831 transcriptional regulator, AraC family; AraC family transcriptional regulator 4928960 5750092 Daci_4504 Delftia acidovorans SPH-1 AraC family transcriptional regulator YP_001565518.1 4928544 D 398578 CDS YP_001565519.1 160899937 5750093 4929342..4930571 1 NC_010002.1 PFAM: EAL domain protein; GAF domain protein; KEGG: psa:PST_3107 EAL domain protein; GAF sensor-containing diguanylate phosphodiesterase 4930571 5750093 Daci_4505 Delftia acidovorans SPH-1 GAF sensor-containing diguanylate phosphodiesterase YP_001565519.1 4929342 D 398578 CDS YP_001565520.1 160899938 5750094 4930865..4931974 1 NC_010002.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: mbb:BCG_1717 putative acyl-CoA dehydrogenase fadE16; acyl-CoA dehydrogenase domain-containing protein 4931974 5750094 Daci_4506 Delftia acidovorans SPH-1 acyl-CoA dehydrogenase domain-containing protein YP_001565520.1 4930865 D 398578 CDS YP_001565521.1 160899939 5750095 4932056..4932904 1 NC_010002.1 KEGG: wsu:WS1830 hypothetical protein; hypothetical protein 4932904 5750095 Daci_4507 Delftia acidovorans SPH-1 hypothetical protein YP_001565521.1 4932056 D 398578 CDS YP_001565522.1 160899940 5750096 4932913..4934181 1 NC_010002.1 KEGG: hhe:HH1512 hypothetical protein; hypothetical protein 4934181 5750096 Daci_4508 Delftia acidovorans SPH-1 hypothetical protein YP_001565522.1 4932913 D 398578 CDS YP_001565523.1 160899941 5750097 4934380..4934730 1 NC_010002.1 hypothetical protein 4934730 5750097 Daci_4509 Delftia acidovorans SPH-1 hypothetical protein YP_001565523.1 4934380 D 398578 CDS YP_001565524.1 160899942 5750098 complement(4935411..4935662) 1 NC_010002.1 KEGG: rso:RSc3419 hypothetical protein; hypothetical protein 4935662 5750098 Daci_4510 Delftia acidovorans SPH-1 hypothetical protein YP_001565524.1 4935411 R 398578 CDS YP_001565525.1 160899943 5750099 complement(4935659..4936366) 1 NC_010002.1 KEGG: rso:RSc3426 probable transmembrane protein; hypothetical protein 4936366 5750099 Daci_4511 Delftia acidovorans SPH-1 hypothetical protein YP_001565525.1 4935659 R 398578 CDS YP_001565526.1 160899944 5750100 complement(4936636..4936860) 1 NC_010002.1 hypothetical protein 4936860 5750100 Daci_4512 Delftia acidovorans SPH-1 hypothetical protein YP_001565526.1 4936636 R 398578 CDS YP_001565527.1 160899945 5750101 complement(4937307..4937735) 1 NC_010002.1 KEGG: tfu:Tfu_1003 hypothetical protein; hypothetical protein 4937735 5750101 Daci_4513 Delftia acidovorans SPH-1 hypothetical protein YP_001565527.1 4937307 R 398578 CDS YP_001565528.1 160899946 5750102 complement(4937765..4948834) 1 NC_010002.1 KEGG: mba:Mbar_A3399 hypothetical protein; TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; SMART: Hedgehog/intein hint domain protein; YD repeat-containing protein 4948834 5750102 Daci_4514 Delftia acidovorans SPH-1 YD repeat-containing protein YP_001565528.1 4937765 R 398578 CDS YP_001565529.1 160899947 5750103 complement(4948969..4966200) 1 NC_010002.1 PFAM: coagulation factor 5/8 type domain protein; Fibronectin type III domain protein; APHP domain protein; KEGG: gur:Gura_0068 fibronectin, type III domain protein; APHP domain-containing protein 4966200 5750103 Daci_4515 Delftia acidovorans SPH-1 APHP domain-containing protein YP_001565529.1 4948969 R 398578 CDS YP_001565530.1 160899948 5750104 complement(4966263..4966796) 1 NC_010002.1 hypothetical protein 4966796 5750104 Daci_4516 Delftia acidovorans SPH-1 hypothetical protein YP_001565530.1 4966263 R 398578 CDS YP_001565531.1 160899949 5750105 4967211..4967450 1 NC_010002.1 hypothetical protein 4967450 5750105 Daci_4517 Delftia acidovorans SPH-1 hypothetical protein YP_001565531.1 4967211 D 398578 CDS YP_001565532.1 160899950 5750106 complement(4967487..4968407) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ade:Adeh_2212 transcriptional regulator, LysR family; LysR family transcriptional regulator 4968407 5750106 Daci_4518 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001565532.1 4967487 R 398578 CDS YP_001565533.1 160899951 5750107 4968537..4969592 1 NC_010002.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: tth:TTC0201 L-threonine 3-dehydrogenase; alcohol dehydrogenase 4969592 5750107 Daci_4519 Delftia acidovorans SPH-1 alcohol dehydrogenase YP_001565533.1 4968537 D 398578 CDS YP_001565534.1 160899952 5750108 4969589..4970389 1 NC_010002.1 KEGG: bpa:BPP0555 hypothetical protein; hypothetical protein 4970389 5750108 Daci_4520 Delftia acidovorans SPH-1 hypothetical protein YP_001565534.1 4969589 D 398578 CDS YP_001565535.1 160899953 5750109 4970427..4971443 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: aav:Aave_3895 uncharacterized protein UPF0065; hypothetical protein 4971443 5750109 Daci_4521 Delftia acidovorans SPH-1 hypothetical protein YP_001565535.1 4970427 D 398578 CDS YP_001565536.1 160899954 5750110 4971556..4972635 1 NC_010002.1 PFAM: porin Gram-negative type; KEGG: bte:BTH_II0333 outer membrane porin, putative; porin 4972635 5750110 Daci_4522 Delftia acidovorans SPH-1 porin YP_001565536.1 4971556 D 398578 CDS YP_001565537.1 160899955 5750111 4972945..4974429 1 NC_010002.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: reh:H16_A3378 transcriptional regulator, AraC-family; AraC family transcriptional regulator 4974429 5750111 Daci_4523 Delftia acidovorans SPH-1 AraC family transcriptional regulator YP_001565537.1 4972945 D 398578 CDS YP_001565538.1 160899956 5750112 4974499..4976298 1 NC_010002.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: aav:Aave_4495 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 4976298 5750112 Daci_4524 Delftia acidovorans SPH-1 methyl-accepting chemotaxis sensory transducer YP_001565538.1 4974499 D 398578 CDS YP_001565539.1 160899957 5750113 complement(4976306..4977103) 1 NC_010002.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: aav:Aave_4512 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4977103 5750113 Daci_4525 Delftia acidovorans SPH-1 short-chain dehydrogenase/reductase SDR YP_001565539.1 4976306 R 398578 CDS YP_001565540.1 160899958 5750114 complement(4977105..4978115) 1 NC_010002.1 PFAM: NMT1/THI5 like domain protein; KEGG: aav:Aave_4513 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein; NMT1/THI5-like domain-containing protein 4978115 5750114 Daci_4526 Delftia acidovorans SPH-1 NMT1/THI5-like domain-containing protein YP_001565540.1 4977105 R 398578 CDS YP_001565541.1 160899959 5750115 complement(4978154..4978915) 1 NC_010002.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_4514 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 4978915 5750115 Daci_4527 Delftia acidovorans SPH-1 binding-protein-dependent transport system inner membrane protein YP_001565541.1 4978154 R 398578 CDS YP_001565542.1 160899960 5750116 complement(4978912..4979718) 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_4515 ABC transporter-related protein; ABC transporter-like protein 4979718 5750116 Daci_4528 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001565542.1 4978912 R 398578 CDS YP_001565543.1 160899961 5750117 complement(4979724..4981220) 1 NC_010002.1 PFAM: acyl-CoA reductase; KEGG: aav:Aave_4516 putative acyl-CoA reductase; acyl-CoA reductase 4981220 5750117 Daci_4529 Delftia acidovorans SPH-1 acyl-CoA reductase YP_001565543.1 4979724 R 398578 CDS YP_001565544.1 160899962 5750118 complement(4981217..4982335) 1 NC_010002.1 KEGG: aav:Aave_4517 putative acyl protein synthase/acyl-CoA reductase-like protein; putative acyl protein synthase/acyl-CoA reductase-like protein 4982335 5750118 Daci_4530 Delftia acidovorans SPH-1 putative acyl protein synthase/acyl-CoA reductase-like protein YP_001565544.1 4981217 R 398578 CDS YP_001565545.1 160899963 5750119 complement(4982523..4984271) 1 NC_010002.1 hypothetical protein 4984271 5750119 Daci_4531 Delftia acidovorans SPH-1 hypothetical protein YP_001565545.1 4982523 R 398578 CDS YP_001565546.1 160899964 5750120 complement(4984372..4985436) 1 NC_010002.1 KEGG: aha:AHA_0552 transport protein; transporter 4985436 5750120 Daci_4532 Delftia acidovorans SPH-1 transporter YP_001565546.1 4984372 R 398578 CDS YP_001565547.1 160899965 5750121 complement(4985418..4986074) 1 NC_010002.1 PFAM: regulatory protein TetR; KEGG: asa:ASA_3759 transcriptional regulator, TetR family; TetR family transcriptional regulator 4986074 5750121 Daci_4533 Delftia acidovorans SPH-1 TetR family transcriptional regulator YP_001565547.1 4985418 R 398578 CDS YP_001565548.1 160899966 5750122 complement(4986096..4987925) 1 NC_010002.1 PFAM: peptidase S15; X-Pro dipeptidyl-peptidase domain protein; KEGG: nfa:nfa43000 putative esterase; X-Pro dipeptidyl-peptidase domain-containing protein 4987925 5750122 Daci_4534 Delftia acidovorans SPH-1 X-Pro dipeptidyl-peptidase domain-containing protein YP_001565548.1 4986096 R 398578 CDS YP_001565549.1 160899967 5750123 4988292..4988579 1 NC_010002.1 KEGG: tbd:Tbd_1197 hypothetical protein; hypothetical protein 4988579 5750123 Daci_4535 Delftia acidovorans SPH-1 hypothetical protein YP_001565549.1 4988292 D 398578 CDS YP_001565550.1 160899968 5750124 4988661..4989161 1 NC_010002.1 PFAM: regulatory protein MarR; KEGG: pna:Pnap_0603 transcriptional regulator, MarR family; MarR family transcriptional regulator 4989161 5750124 Daci_4536 Delftia acidovorans SPH-1 MarR family transcriptional regulator YP_001565550.1 4988661 D 398578 CDS YP_001565551.1 160899969 5750125 complement(4989168..4990055) 1 NC_010002.1 PFAM: amidohydrolase 2; KEGG: pna:Pnap_0606 amidohydrolase 2; amidohydrolase 2 4990055 5750125 Daci_4537 Delftia acidovorans SPH-1 amidohydrolase 2 YP_001565551.1 4989168 R 398578 CDS YP_001565552.1 160899970 5750126 4990251..4991960 1 NC_010002.1 PFAM: Tannase and feruloyl esterase; KEGG: bam:Bamb_4911 feruloyl esterase; tannase and feruloyl esterase 4991960 5750126 Daci_4538 Delftia acidovorans SPH-1 tannase and feruloyl esterase YP_001565552.1 4990251 D 398578 CDS YP_001565553.1 160899971 5750127 4992143..4993291 1 NC_010002.1 PFAM: porin Gram-negative type; KEGG: pol:Bpro_3117 porin, gram-negative type; porin 4993291 5750127 Daci_4539 Delftia acidovorans SPH-1 porin YP_001565553.1 4992143 D 398578 CDS YP_001565554.1 160899972 5750128 4993341..4994333 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: pna:Pnap_0604 uncharacterized protein UPF0065; hypothetical protein 4994333 5750128 Daci_4540 Delftia acidovorans SPH-1 hypothetical protein YP_001565554.1 4993341 D 398578 CDS YP_001565555.1 160899973 5750129 4994400..4994885 1 NC_010002.1 PFAM: protein of unknown function UPF0074; KEGG: pla:Plav_0970 transcriptional regulator, BadM/Rrf2 family; BadM/Rrf2 family transcriptional regulator 4994885 5750129 Daci_4541 Delftia acidovorans SPH-1 BadM/Rrf2 family transcriptional regulator YP_001565555.1 4994400 D 398578 CDS YP_001565556.1 160899974 5750130 4994872..4995771 1 NC_010002.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pau:PA14_09950 putative oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 4995771 5750130 Daci_4542 Delftia acidovorans SPH-1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001565556.1 4994872 D 398578 CDS YP_001565557.1 160899975 5750131 complement(4995787..4996005) 1 NC_010002.1 hypothetical protein 4996005 5750131 Daci_4543 Delftia acidovorans SPH-1 hypothetical protein YP_001565557.1 4995787 R 398578 CDS YP_001565558.1 160899976 5750132 complement(4996133..4996933) 1 NC_010002.1 PFAM: penicillin-binding protein transpeptidase; KEGG: bch:Bcen2424_3379 beta-lactamase; beta-lactamase 4996933 5750132 Daci_4544 Delftia acidovorans SPH-1 beta-lactamase YP_001565558.1 4996133 R 398578 CDS YP_001565559.1 160899977 5750133 complement(4997105..4998799) 1 NC_010002.1 activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 4998799 5750133 Daci_4545 Delftia acidovorans SPH-1 long-chain-fatty-acid--CoA ligase YP_001565559.1 4997105 R 398578 CDS YP_001565560.1 160899978 5750134 4998969..4999553 1 NC_010002.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: pna:Pnap_2042 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; FMN-binding pyridoxamine 5'-phosphate oxidase-like protein 4999553 5750134 Daci_4546 Delftia acidovorans SPH-1 FMN-binding pyridoxamine 5'-phosphate oxidase-like protein YP_001565560.1 4998969 D 398578 CDS YP_001565561.1 160899979 5750135 complement(4999555..5000058) 1 NC_010002.1 hypothetical protein 5000058 5750135 Daci_4547 Delftia acidovorans SPH-1 hypothetical protein YP_001565561.1 4999555 R 398578 CDS YP_001565562.1 160899980 5750136 complement(5000061..5000963) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN4781 transcriptional regulator, LysR family; LysR family transcriptional regulator 5000963 5750136 Daci_4548 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001565562.1 5000061 R 398578 CDS YP_001565563.1 160899981 5750137 complement(5001025..5001894) 1 NC_010002.1 PFAM: isochorismatase hydrolase; KEGG: bte:BTH_II0283 isochorismatase family protein family; isochorismatase hydrolase 5001894 5750137 Daci_4549 Delftia acidovorans SPH-1 isochorismatase hydrolase YP_001565563.1 5001025 R 398578 CDS YP_001565564.1 160899982 5750138 complement(5001942..5006117) 1 NC_010002.1 KEGG: ajs:Ajs_2313 ATP-dependent helicase HrpA; TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase domain protein; helicase-associated domain protein; protein of unknown function DUF1605; SMART: AAA ATPase; DEAD-like helicases; ATP-dependent helicase HrpA 5006117 5750138 Daci_4550 Delftia acidovorans SPH-1 ATP-dependent helicase HrpA YP_001565564.1 5001942 R 398578 CDS YP_001565565.1 160899983 5750139 5006232..5007398 1 NC_010002.1 PFAM: metallophosphoesterase; KEGG: ajs:Ajs_2315 metallophosphoesterase; metallophosphoesterase 5007398 5750139 Daci_4551 Delftia acidovorans SPH-1 metallophosphoesterase YP_001565565.1 5006232 D 398578 CDS YP_001565566.1 160899984 5750140 complement(5007426..5008535) 1 NC_010002.1 KEGG: pol:Bpro_3874 putative hemagglutinin-related protein; putative hemagglutinin-like protein 5008535 5750140 Daci_4552 Delftia acidovorans SPH-1 putative hemagglutinin-like protein YP_001565566.1 5007426 R 398578 CDS YP_001565567.1 160899985 5750141 complement(5008532..5009275) 1 NC_010002.1 SMART: extracellular solute-binding protein family 3; KEGG: pol:Bpro_3873 extracellular solute-binding protein, family 3; extracellular solute-binding protein 5009275 5750141 Daci_4553 Delftia acidovorans SPH-1 extracellular solute-binding protein YP_001565567.1 5008532 R 398578 CDS YP_001565568.1 160899986 5750142 complement(5009295..5010272) 1 NC_010002.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pol:Bpro_3872 transcriptional regulator, GntR family; GntR family transcriptional regulator 5010272 5750142 Daci_4554 Delftia acidovorans SPH-1 GntR family transcriptional regulator YP_001565568.1 5009295 R 398578 CDS YP_001565569.1 160899987 5750143 complement(5010298..5012913) 1 NC_010002.1 catalyzes the conversion of citrate to isocitrate; aconitate hydratase 5012913 acnA 5750143 acnA Delftia acidovorans SPH-1 aconitate hydratase YP_001565569.1 5010298 R 398578 CDS YP_001565570.1 160899988 5750144 5013011..5014024 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: pol:Bpro_3870 uncharacterized protein UPF0065; hypothetical protein 5014024 5750144 Daci_4556 Delftia acidovorans SPH-1 hypothetical protein YP_001565570.1 5013011 D 398578 CDS YP_001565571.1 160899989 5750145 5014080..5015063 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: pol:Bpro_3869 uncharacterized protein UPF0065; hypothetical protein 5015063 5750145 Daci_4557 Delftia acidovorans SPH-1 hypothetical protein YP_001565571.1 5014080 D 398578 CDS YP_001565572.1 160899990 5750146 complement(5015094..5016239) 1 NC_010002.1 KEGG: bur:Bcep18194_A4864 metal-dependent phosphohydrolase; metal-dependent phosphohydrolase 5016239 5750146 Daci_4558 Delftia acidovorans SPH-1 metal-dependent phosphohydrolase YP_001565572.1 5015094 R 398578 CDS YP_001565573.1 160899991 5750147 complement(5016275..5017129) 1 NC_010002.1 KEGG: pfl:PFL_3007 homolog of eukaryotic DNA ligase III; DNA ligase III-like protein 5017129 5750147 Daci_4559 Delftia acidovorans SPH-1 DNA ligase III-like protein YP_001565573.1 5016275 R 398578 CDS YP_001565574.1 160899992 5750148 complement(5017541..5018398) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pol:Bpro_0510 transcriptional regulator, LysR family; LysR family transcriptional regulator 5018398 5750148 Daci_4560 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001565574.1 5017541 R 398578 CDS YP_001565575.1 160899993 5750149 5018529..5018912 1 NC_010002.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: pol:Bpro_0509 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase 5018912 5750149 Daci_4561 Delftia acidovorans SPH-1 4-oxalocrotonate tautomerase YP_001565575.1 5018529 D 398578 CDS YP_001565576.1 160899994 5750150 complement(5018963..5019847) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_A2778 transcriptional regulator, LysR-family; LysR family transcriptional regulator 5019847 5750150 Daci_4562 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001565576.1 5018963 R 398578 CDS YP_001565577.1 160899995 5750151 5019980..5020969 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: pna:Pnap_0869 uncharacterized protein UPF0065; hypothetical protein 5020969 5750151 Daci_4563 Delftia acidovorans SPH-1 hypothetical protein YP_001565577.1 5019980 D 398578 CDS YP_001565578.1 160899996 5750152 5020983..5022614 1 NC_010002.1 PFAM: gamma-glutamyltranspeptidase; KEGG: pol:Bpro_3878 gamma-glutamyltransferase; gamma-glutamyltransferase 5022614 5750152 Daci_4564 Delftia acidovorans SPH-1 gamma-glutamyltransferase YP_001565578.1 5020983 D 398578 CDS YP_001565579.1 160899997 5750153 complement(5022630..5023625) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: bbr:BB2684 putative lipoprotein; hypothetical protein 5023625 5750153 Daci_4565 Delftia acidovorans SPH-1 hypothetical protein YP_001565579.1 5022630 R 398578 CDS YP_001565580.1 160899998 5750154 complement(5023652..5024542) 1 NC_010002.1 PFAM: amidohydrolase 2; KEGG: pfl:PFL_3557 transcriptional regulator, GntR family/amidohydrolase family protein; amidohydrolase 2 5024542 5750154 Daci_4566 Delftia acidovorans SPH-1 amidohydrolase 2 YP_001565580.1 5023652 R 398578 CDS YP_001565581.1 160899999 5750155 5024613..5025611 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: vei:Veis_3262 transcriptional regulator, LysR family; LysR family transcriptional regulator 5025611 5750155 Daci_4567 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001565581.1 5024613 D 398578 CDS YP_001565582.1 160900000 5750156 5025663..5026868 1 NC_010002.1 PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_2322 major facilitator superfamily MFS_1; major facilitator transporter 5026868 5750156 Daci_4568 Delftia acidovorans SPH-1 major facilitator transporter YP_001565582.1 5025663 D 398578 CDS YP_001565583.1 160900001 5750157 complement(5026881..5028014) 1 NC_010002.1 KEGG: prw:PsycPRwf_0651 ABC-2 type transporter; ABC-2 type transporter 5028014 5750157 Daci_4569 Delftia acidovorans SPH-1 ABC-2 type transporter YP_001565583.1 5026881 R 398578 CDS YP_001565584.1 160900002 5750158 complement(5028016..5029269) 1 NC_010002.1 PFAM: ABC-2 type transporter; KEGG: pcr:Pcryo_1038 hypothetical protein; ABC-2 type transporter 5029269 5750158 Daci_4570 Delftia acidovorans SPH-1 ABC-2 type transporter YP_001565584.1 5028016 R 398578 CDS YP_001565585.1 160900003 5750159 complement(5029244..5030293) 1 NC_010002.1 PFAM: secretion protein HlyD family protein; KEGG: eca:ECA0424 putative membrane protein; secretion protein HlyD family protein 5030293 5750159 Daci_4571 Delftia acidovorans SPH-1 secretion protein HlyD family protein YP_001565585.1 5029244 R 398578 CDS YP_001565586.1 160900004 5750160 complement(5030290..5031741) 1 NC_010002.1 PFAM: outer membrane efflux protein; KEGG: prw:PsycPRwf_0654 outer membrane efflux protein; outer membrane efflux protein 5031741 5750160 Daci_4572 Delftia acidovorans SPH-1 outer membrane efflux protein YP_001565586.1 5030290 R 398578 CDS YP_001565587.1 160900005 5750161 5032025..5033371 1 NC_010002.1 catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis; N-acetylglutamate synthase 5033371 5750161 Daci_4573 Delftia acidovorans SPH-1 N-acetylglutamate synthase YP_001565587.1 5032025 D 398578 CDS YP_001565588.1 160900006 5750162 complement(5033542..5034453) 1 NC_010002.1 PFAM: beta-lactamase; KEGG: ajs:Ajs_2328 beta-lactamase; beta-lactamase 5034453 5750162 Daci_4574 Delftia acidovorans SPH-1 beta-lactamase YP_001565588.1 5033542 R 398578 CDS YP_001565589.1 160900007 5750163 5034563..5035420 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_2551 transcriptional regulator, LysR family; LysR family transcriptional regulator 5035420 5750163 Daci_4575 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001565589.1 5034563 D 398578 CDS YP_001565590.1 160900008 5750164 5035514..5036179 1 NC_010002.1 PFAM: glutaredoxin; Glutathione S-transferase domain; KEGG: ajs:Ajs_2333 glutaredoxin; glutathione S-transferase domain-containing protein 5036179 5750164 Daci_4576 Delftia acidovorans SPH-1 glutathione S-transferase domain-containing protein YP_001565590.1 5035514 D 398578 CDS YP_001565591.1 160900009 5750165 5036286..5036933 1 NC_010002.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pol:Bpro_2393 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA 5036933 5750165 Daci_4577 Delftia acidovorans SPH-1 lysine exporter protein LysE/YggA YP_001565591.1 5036286 D 398578 CDS YP_001565592.1 160900010 5750166 complement(5036969..5037925) 1 NC_010002.1 PFAM: putative sugar-binding domain protein; KEGG: vei:Veis_2041 transcriptional regulator, DeoR family; DeoR family transcriptional regulator 5037925 5750166 Daci_4578 Delftia acidovorans SPH-1 DeoR family transcriptional regulator YP_001565592.1 5036969 R 398578 CDS YP_001565593.1 160900011 5750167 complement(5037971..5039092) 1 NC_010002.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bch:Bcen2424_4817 alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase 5039092 5750167 Daci_4579 Delftia acidovorans SPH-1 alcohol dehydrogenase YP_001565593.1 5037971 R 398578 CDS YP_001565594.1 160900012 5750168 complement(5039141..5040121) 1 NC_010002.1 PFAM: inner-membrane translocator; KEGG: bpm:BURPS1710b_A1792 sugar ABC transporter, permease protein; monosaccharide-transporting ATPase 5040121 5750168 Daci_4580 Delftia acidovorans SPH-1 monosaccharide-transporting ATPase YP_001565594.1 5039141 R 398578 CDS YP_001565595.1 160900013 5750169 complement(5040170..5040934) 1 NC_010002.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: vei:Veis_2043 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 5040934 5750169 Daci_4581 Delftia acidovorans SPH-1 short-chain dehydrogenase/reductase SDR YP_001565595.1 5040170 R 398578 CDS YP_001565596.1 160900014 5750170 complement(5040931..5041992) 1 NC_010002.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: vei:Veis_2044 periplasmic binding protein/LacI transcriptional regulator; periplasmic-binding protein/LacI transcriptional regulator 5041992 5750170 Daci_4582 Delftia acidovorans SPH-1 periplasmic-binding protein/LacI transcriptional regulator YP_001565596.1 5040931 R 398578 CDS YP_001565597.1 160900015 5750171 complement(5042056..5043558) 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_2046 ABC transporter related; ABC transporter-like protein 5043558 5750171 Daci_4583 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001565597.1 5042056 R 398578 CDS YP_001565598.1 160900016 5750172 complement(5043561..5044034) 1 NC_010002.1 KEGG: pol:Bpro_1460 sugar-phosphate isomerases, RpiB/LacA/LacB family; TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase; RpiB/LacA/LacB family sugar-phosphate isomerase 5044034 5750172 Daci_4584 Delftia acidovorans SPH-1 RpiB/LacA/LacB family sugar-phosphate isomerase YP_001565598.1 5043561 R 398578 CDS YP_001565599.1 160900017 5750173 5044328..5046124 1 NC_010002.1 in some organisms the DhaK and DhaL subunits are encoded by separate genes; in others they are fused; functions along with DhaM to phosphorylate dihydroxyacetone; dihydroxyacetone kinase 5046124 5750173 Daci_4585 Delftia acidovorans SPH-1 dihydroxyacetone kinase YP_001565599.1 5044328 D 398578 CDS YP_001565600.1 160900018 5750174 complement(5046128..5046634) 1 NC_010002.1 PFAM: Disulphide bond formation protein DsbB; KEGG: aav:Aave_2549 disulphide bond formation protein DsbB; disulfide bond formation protein DsbB 5046634 5750174 Daci_4586 Delftia acidovorans SPH-1 disulfide bond formation protein DsbB YP_001565600.1 5046128 R 398578 CDS YP_001565601.1 160900019 5750175 complement(5046733..5047860) 1 NC_010002.1 KEGG: ajs:Ajs_2335 sulfate ABC transporter, ATPase subunit; TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; sulfate ABC transporter ATPase 5047860 5750175 Daci_4587 Delftia acidovorans SPH-1 sulfate ABC transporter ATPase YP_001565601.1 5046733 R 398578 CDS YP_001565602.1 160900020 5750176 complement(5047898..5048905) 1 NC_010002.1 TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_2336 sulfate ABC transporter, inner membrane subunit CysW; sulfate ABC transporter permease 5048905 5750176 Daci_4588 Delftia acidovorans SPH-1 sulfate ABC transporter permease YP_001565602.1 5047898 R 398578 CDS YP_001565603.1 160900021 5750177 complement(5048907..5049833) 1 NC_010002.1 TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_2337 sulfate ABC transporter, inner membrane subunit CysT; sulfate ABC transporter permease 5049833 5750177 Daci_4589 Delftia acidovorans SPH-1 sulfate ABC transporter permease YP_001565603.1 5048907 R 398578 CDS YP_001565604.1 160900022 5750178 complement(5049888..5050916) 1 NC_010002.1 TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: ajs:Ajs_2338 sulfate ABC transporter, periplasmic sulfate-binding protein; sulfate ABC transporter substrate-binding protein 5050916 5750178 Daci_4590 Delftia acidovorans SPH-1 sulfate ABC transporter substrate-binding protein YP_001565604.1 5049888 R 398578 CDS YP_001565605.1 160900023 5750179 complement(5051048..5051698) 1 NC_010002.1 PFAM: protein of unknown function DUF1234; KEGG: aav:Aave_2544 protein of unknown function DUF1234; hypothetical protein 5051698 5750179 Daci_4591 Delftia acidovorans SPH-1 hypothetical protein YP_001565605.1 5051048 R 398578 CDS YP_001565606.1 160900024 5750180 complement(5051814..5052743) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_2542 transcriptional regulator, LysR family; LysR family transcriptional regulator 5052743 5750180 Daci_4592 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001565606.1 5051814 R 398578 CDS YP_001565607.1 160900025 5750181 5052920..5053558 1 NC_010002.1 PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: aav:Aave_2541 (acyl-carrier-protein) phosphodiesterase; NAD(P)H dehydrogenase 5053558 5750181 Daci_4593 Delftia acidovorans SPH-1 NAD(P)H dehydrogenase YP_001565607.1 5052920 D 398578 CDS YP_001565608.1 160900026 5750182 5053894..5054382 1 NC_010002.1 hypothetical protein 5054382 5750182 Daci_4594 Delftia acidovorans SPH-1 hypothetical protein YP_001565608.1 5053894 D 398578 CDS YP_001565609.1 160900027 5750183 complement(5054484..5055032) 1 NC_010002.1 PFAM: NADPH-dependent FMN reductase; KEGG: aav:Aave_2540 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 5055032 5750183 Daci_4595 Delftia acidovorans SPH-1 NADPH-dependent FMN reductase YP_001565609.1 5054484 R 398578 CDS YP_001565610.1 160900028 5750184 complement(5055128..5055958) 1 NC_010002.1 PFAM: NLPA lipoprotein; KEGG: reh:H16_B2232 ABC-type transporter, periplasmic component: MUT family; NLPA lipoprotein 5055958 5750184 Daci_4596 Delftia acidovorans SPH-1 NLPA lipoprotein YP_001565610.1 5055128 R 398578 CDS YP_001565611.1 160900029 5750185 complement(5056021..5056686) 1 NC_010002.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cvi:CV_2296 probable transmembrane ABC transporter protein; binding-protein-dependent transport system inner membrane protein 5056686 5750185 Daci_4597 Delftia acidovorans SPH-1 binding-protein-dependent transport system inner membrane protein YP_001565611.1 5056021 R 398578 CDS YP_001565612.1 160900030 5750186 complement(5056754..5057635) 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cvi:CV_2295 probable ABC transporter system, ATP-binding protein; ABC transporter-like protein 5057635 5750186 Daci_4598 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001565612.1 5056754 R 398578 CDS YP_001565613.1 160900031 5750187 5057914..5058762 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_2321 ABC transporter related; ABC transporter-like protein 5058762 5750187 Daci_4599 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001565613.1 5057914 D 398578 CDS YP_001565614.1 160900032 5750188 5058780..5059373 1 NC_010002.1 PFAM: cobalt transport protein; KEGG: ajs:Ajs_2320 cobalt transport protein; cobalt transport protein 5059373 5750188 Daci_4600 Delftia acidovorans SPH-1 cobalt transport protein YP_001565614.1 5058780 D 398578 CDS YP_001565615.1 160900033 5750189 5059444..5060037 1 NC_010002.1 PFAM: BioY protein; KEGG: ajs:Ajs_2319 BioY protein; BioY protein 5060037 5750189 Daci_4601 Delftia acidovorans SPH-1 BioY protein YP_001565615.1 5059444 D 398578 CDS YP_001565616.1 160900034 5750190 5060030..5061550 1 NC_010002.1 PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_2318 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 5061550 5750190 Daci_4602 Delftia acidovorans SPH-1 AMP-dependent synthetase/ligase YP_001565616.1 5060030 D 398578 CDS YP_001565617.1 160900035 5750191 5061547..5062746 1 NC_010002.1 TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: ajs:Ajs_2317 acetyl-CoA acetyltransferases; acetyl-CoA acetyltransferase 5062746 5750191 Daci_4603 Delftia acidovorans SPH-1 acetyl-CoA acetyltransferase YP_001565617.1 5061547 D 398578 CDS YP_001565618.1 160900036 5750192 5062751..5063476 1 NC_010002.1 PFAM: nitroreductase; KEGG: ajs:Ajs_2316 nitroreductase; nitroreductase 5063476 5750192 Daci_4604 Delftia acidovorans SPH-1 nitroreductase YP_001565618.1 5062751 D 398578 CDS YP_001565619.1 160900037 5750193 complement(5063661..5064479) 1 NC_010002.1 TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: ajs:Ajs_2342 lipoprotein, YaeC family; YaeC family lipoprotein 5064479 5750193 Daci_4605 Delftia acidovorans SPH-1 YaeC family lipoprotein YP_001565619.1 5063661 R 398578 CDS YP_001565620.1 160900038 5750194 complement(5064614..5064964) 1 NC_010002.1 KEGG: pna:Pnap_4720 hypothetical protein; hypothetical protein 5064964 5750194 Daci_4606 Delftia acidovorans SPH-1 hypothetical protein YP_001565620.1 5064614 R 398578 CDS YP_001565621.1 160900039 5750196 complement(5065393..5068446) 1 NC_010002.1 PFAM: FAD linked oxidase domain protein; KEGG: bam:Bamb_6039 FAD linked oxidase domain protein; FAD linked oxidase domain-containing protein 5068446 5750196 Daci_4607 Delftia acidovorans SPH-1 FAD linked oxidase domain-containing protein YP_001565621.1 5065393 R 398578 CDS YP_001565622.1 160900040 5750197 5068500..5069498 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bch:Bcen2424_6151 transcriptional regulator, LysR family; LysR family transcriptional regulator 5069498 5750197 Daci_4608 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001565622.1 5068500 D 398578 CDS YP_001565623.1 160900041 5750199 complement(5069716..5070126) 1 NC_010002.1 PFAM: regulatory protein MerR; KEGG: ajs:Ajs_2393 putative transcriptional regulator, MerR family; MerR family transcriptional regulator 5070126 5750199 Daci_4609 Delftia acidovorans SPH-1 MerR family transcriptional regulator YP_001565623.1 5069716 R 398578 CDS YP_001565624.1 160900042 5750200 complement(5070315..5070647) 1 NC_010002.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha 5070647 ihfA 5750200 ihfA Delftia acidovorans SPH-1 integration host factor subunit alpha YP_001565624.1 5070315 R 398578 CDS YP_001565625.1 160900043 5750201 complement(5070681..5073128) 1 NC_010002.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 5073128 pheT 5750201 pheT Delftia acidovorans SPH-1 phenylalanyl-tRNA synthetase subunit beta YP_001565625.1 5070681 R 398578 CDS YP_001565626.1 160900044 5750202 complement(5073204..5074256) 1 NC_010002.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 5074256 pheS 5750202 pheS Delftia acidovorans SPH-1 phenylalanyl-tRNA synthetase subunit alpha YP_001565626.1 5073204 R 398578 CDS YP_001565627.1 160900045 5750203 complement(5074367..5074726) 1 NC_010002.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 5074726 rplT 5750203 rplT Delftia acidovorans SPH-1 50S ribosomal protein L20 YP_001565627.1 5074367 R 398578 CDS YP_001565628.1 160900046 5750204 complement(5074753..5074956) 1 NC_010002.1 PFAM: ribosomal protein L35; KEGG: aav:Aave_2857 ribosomal protein L35; 50S ribosomal protein L35 5074956 rpmI 5750204 rpmI Delftia acidovorans SPH-1 50S ribosomal protein L35 YP_001565628.1 5074753 R 398578 CDS YP_001565629.1 160900047 5750205 complement(5075160..5075777) 1 NC_010002.1 TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; KEGG: ajs:Ajs_2399 translation initiation factor IF-3; translation initiation factor IF-3 5075777 5750205 Daci_4615 Delftia acidovorans SPH-1 translation initiation factor IF-3 YP_001565629.1 5075160 R 398578 CDS YP_001565630.1 160900048 5750206 complement(5075858..5077789) 1 NC_010002.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 5077789 thrS 5750206 thrS Delftia acidovorans SPH-1 threonyl-tRNA synthetase YP_001565630.1 5075858 R 398578 CDS YP_001565631.1 160900049 5750207 complement(5078098..5079513) 1 NC_010002.1 TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: vei:Veis_3088 isocitrate lyase; isocitrate lyase 5079513 5750207 Daci_4617 Delftia acidovorans SPH-1 isocitrate lyase YP_001565631.1 5078098 R 398578 CDS YP_001565632.1 160900050 5750208 5079792..5080742 1 NC_010002.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ajs:Ajs_2402 protein of unknown function DUF6, transmembrane; hypothetical protein 5080742 5750208 Daci_4618 Delftia acidovorans SPH-1 hypothetical protein YP_001565632.1 5079792 D 398578 CDS YP_001565633.1 160900051 5750209 5080959..5081258 1 NC_010002.1 PFAM: SWIB/MDM2 domain protein; KEGG: aav:Aave_2865 SWIB/MDM2 domain protein; SWIB/MDM2 domain-containing protein 5081258 5750209 Daci_4619 Delftia acidovorans SPH-1 SWIB/MDM2 domain-containing protein YP_001565633.1 5080959 D 398578 CDS YP_001565634.1 160900052 5750210 5081322..5082503 1 NC_010002.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: vei:Veis_3083 FMN-dependent alpha-hydroxy acid dehydrogenase; FMN-dependent alpha-hydroxy acid dehydrogenase 5082503 5750210 Daci_4620 Delftia acidovorans SPH-1 FMN-dependent alpha-hydroxy acid dehydrogenase YP_001565634.1 5081322 D 398578 CDS YP_001565635.1 160900053 5750211 5082610..5082882 1 NC_010002.1 KEGG: aav:Aave_3310 BFD domain protein (2Fe-2S)-binding domain protein; BFD/(2Fe-2S)-binding domain-containing protein 5082882 5750211 Daci_4621 Delftia acidovorans SPH-1 BFD/(2Fe-2S)-binding domain-containing protein YP_001565635.1 5082610 D 398578 CDS YP_001565636.1 160900054 5750212 5082984..5083685 1 NC_010002.1 TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: aav:Aave_3311 TonB family protein; TonB family protein 5083685 5750212 Daci_4622 Delftia acidovorans SPH-1 TonB family protein YP_001565636.1 5082984 D 398578 CDS YP_001565637.1 160900055 5750213 5083701..5084423 1 NC_010002.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: ajs:Ajs_2407 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 5084423 5750213 Daci_4623 Delftia acidovorans SPH-1 MotA/TolQ/ExbB proton channel YP_001565637.1 5083701 D 398578 CDS YP_001565638.1 160900056 5750214 5084427..5084840 1 NC_010002.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: aav:Aave_3313 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 5084840 5750214 Daci_4624 Delftia acidovorans SPH-1 biopolymer transport protein ExbD/TolR YP_001565638.1 5084427 D 398578 CDS YP_001565639.1 160900057 5750215 5085041..5085262 1 NC_010002.1 KEGG: ajs:Ajs_2409 hypothetical protein; hypothetical protein 5085262 5750215 Daci_4625 Delftia acidovorans SPH-1 hypothetical protein YP_001565639.1 5085041 D 398578 CDS YP_001565640.1 160900058 5750216 complement(5085523..5085948) 1 NC_010002.1 PFAM: protein of unknown function DUF336; KEGG: ajs:Ajs_2410 protein of unknown function DUF336; hypothetical protein 5085948 5750216 Daci_4626 Delftia acidovorans SPH-1 hypothetical protein YP_001565640.1 5085523 R 398578 CDS YP_001565641.1 160900059 5750217 5086121..5086813 1 NC_010002.1 PFAM: protein of unknown function UPF0005; KEGG: aav:Aave_3316 protein of unknown function UPF0005; hypothetical protein 5086813 5750217 Daci_4627 Delftia acidovorans SPH-1 hypothetical protein YP_001565641.1 5086121 D 398578 CDS YP_001565642.1 160900060 5750218 5086880..5087308 1 NC_010002.1 KEGG: aav:Aave_3317 hypothetical protein; hypothetical protein 5087308 5750218 Daci_4628 Delftia acidovorans SPH-1 hypothetical protein YP_001565642.1 5086880 D 398578 CDS YP_001565643.1 160900061 5750219 complement(5087410..5088882) 1 NC_010002.1 in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]; 23S rRNA 5-methyluridine methyltransferase 5088882 rumA 5750219 rumA Delftia acidovorans SPH-1 23S rRNA 5-methyluridine methyltransferase YP_001565643.1 5087410 R 398578 CDS YP_001565644.1 160900062 5750220 complement(5088959..5089276) 1 NC_010002.1 KEGG: aav:Aave_3319 hypothetical protein; hypothetical protein 5089276 5750220 Daci_4630 Delftia acidovorans SPH-1 hypothetical protein YP_001565644.1 5088959 R 398578 CDS YP_001565645.1 160900063 5750221 5089464..5090024 1 NC_010002.1 KEGG: aav:Aave_1942 transcriptional regulator-like protein; transcriptional regulator-like protein 5090024 5750221 Daci_4631 Delftia acidovorans SPH-1 transcriptional regulator-like protein YP_001565645.1 5089464 D 398578 CDS YP_001565646.1 160900064 5750222 5090057..5090926 1 NC_010002.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: aav:Aave_1940 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 5090926 5750222 Daci_4632 Delftia acidovorans SPH-1 NAD-dependent epimerase/dehydratase YP_001565646.1 5090057 D 398578 CDS YP_001565647.1 160900065 5750223 5090919..5091323 1 NC_010002.1 KEGG: pna:Pnap_1480 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 5091323 5750223 Daci_4633 Delftia acidovorans SPH-1 NAD-dependent epimerase/dehydratase YP_001565647.1 5090919 D 398578 CDS YP_001565648.1 160900066 5750224 5091320..5091799 1 NC_010002.1 KEGG: pna:Pnap_1479 integral membrane protein-like protein; integral membrane protein 5091799 5750224 Daci_4634 Delftia acidovorans SPH-1 integral membrane protein YP_001565648.1 5091320 D 398578 CDS YP_001565649.1 160900067 5750225 complement(5091828..5092043) 1 NC_010002.1 PFAM: TOBE domain protein; KEGG: aav:Aave_3040 TOBE domain protein; TOBE domain-containing protein 5092043 5750225 Daci_4635 Delftia acidovorans SPH-1 TOBE domain-containing protein YP_001565649.1 5091828 R 398578 CDS YP_001565650.1 160900068 5750226 complement(5092098..5093078) 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_3041 ABC transporter-related protein; ABC transporter-like protein 5093078 5750226 Daci_4636 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001565650.1 5092098 R 398578 CDS YP_001565651.1 160900069 5750227 complement(5093094..5093945) 1 NC_010002.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_3042 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 5093945 5750227 Daci_4637 Delftia acidovorans SPH-1 binding-protein-dependent transport system inner membrane protein YP_001565651.1 5093094 R 398578 CDS YP_001565652.1 160900070 5750228 complement(5093957..5095117) 1 NC_010002.1 catalyzes the release of sulfite from alkanesulfonates; alkanesulfonate monooxygenase 5095117 5750228 Daci_4638 Delftia acidovorans SPH-1 alkanesulfonate monooxygenase YP_001565652.1 5093957 R 398578 CDS YP_001565653.1 160900071 5750229 complement(5095156..5096211) 1 NC_010002.1 KEGG: pna:Pnap_2419 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3; aliphatic sulfonate ABC transporter substrate-binding protein 5096211 5750229 Daci_4639 Delftia acidovorans SPH-1 aliphatic sulfonate ABC transporter substrate-binding protein YP_001565653.1 5095156 R 398578 CDS YP_001565654.1 160900072 5750230 complement(5096235..5097245) 1 NC_010002.1 KEGG: rfr:Rfer_1779 ABC transporter, substrate-binding protein, aliphatic sulphonates; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3; aliphatic sulfonate ABC transporter substrate-binding protein 5097245 5750230 Daci_4640 Delftia acidovorans SPH-1 aliphatic sulfonate ABC transporter substrate-binding protein YP_001565654.1 5096235 R 398578 CDS YP_001565655.1 160900073 5750231 complement(5097654..5098676) 1 NC_010002.1 TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: aav:Aave_3046 sulfate ABC transporter, periplasmic sulfate-binding protein; sulfate ABC transporter substrate-binding protein 5098676 5750231 Daci_4641 Delftia acidovorans SPH-1 sulfate ABC transporter substrate-binding protein YP_001565655.1 5097654 R 398578 CDS YP_001565656.1 160900074 5750232 5098821..5099093 1 NC_010002.1 PFAM: Fe(II) trafficking protein YggX; KEGG: rfr:Rfer_2102 Fe(II) trafficking protein YggX; hypothetical protein 5099093 5750232 Daci_4642 Delftia acidovorans SPH-1 hypothetical protein YP_001565656.1 5098821 D 398578 CDS YP_001565657.1 160900075 5750233 5099266..5099934 1 NC_010002.1 PFAM: protein of unknown function UPF0126; KEGG: ajs:Ajs_1797 protein of unknown function UPF0126; hypothetical protein 5099934 5750233 Daci_4643 Delftia acidovorans SPH-1 hypothetical protein YP_001565657.1 5099266 D 398578 CDS YP_001565658.1 160900076 5750234 5099944..5101881 1 NC_010002.1 TIGRFAM: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC; PFAM: FAD dependent oxidoreductase; protein of unknown function DUF752; KEGG: ajs:Ajs_1796 protein of unknown function DUF752; tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC 5101881 5750234 Daci_4644 Delftia acidovorans SPH-1 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC YP_001565658.1 5099944 D 398578 CDS YP_001565659.1 160900077 5750235 5102073..5104154 1 NC_010002.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: azo:azo3836 probable TonB-dependent receptor; TonB-dependent receptor 5104154 5750235 Daci_4645 Delftia acidovorans SPH-1 TonB-dependent receptor YP_001565659.1 5102073 D 398578 CDS YP_001565660.1 160900078 5750236 5104177..5105052 1 NC_010002.1 KEGG: azo:azo3843 hypothetical protein; hypothetical protein 5105052 5750236 Daci_4646 Delftia acidovorans SPH-1 hypothetical protein YP_001565660.1 5104177 D 398578 CDS YP_001565661.1 160900079 5750237 5105086..5105634 1 NC_010002.1 KEGG: rru:Rru_A0135 molybdenum ABC transporter ATP-binding protein; molybdenum ABC transporter ATP-binding protein 5105634 5750237 Daci_4647 Delftia acidovorans SPH-1 molybdenum ABC transporter ATP-binding protein YP_001565661.1 5105086 D 398578 CDS YP_001565662.1 160900080 5750238 5105640..5106701 1 NC_010002.1 PFAM: periplasmic binding protein; KEGG: rpc:RPC_1985 periplasmic binding protein; periplasmic-binding protein 5106701 5750238 Daci_4648 Delftia acidovorans SPH-1 periplasmic-binding protein YP_001565662.1 5105640 D 398578 CDS YP_001565663.1 160900081 5750239 5106701..5107714 1 NC_010002.1 PFAM: transport system permease protein; ABC-3 protein; KEGG: pde:Pden_0865 transport system permease protein; transport system permease 5107714 5750239 Daci_4649 Delftia acidovorans SPH-1 transport system permease YP_001565663.1 5106701 D 398578 CDS YP_001565664.1 160900082 5750240 5107716..5108501 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rru:Rru_A3223 ABC transporter component; ABC transporter-like protein 5108501 5750240 Daci_4650 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001565664.1 5107716 D 398578 CDS YP_001565665.1 160900083 5750241 complement(5108498..5109541) 1 NC_010002.1 KEGG: xcc:XCC0173 hypothetical protein; hypothetical protein 5109541 5750241 Daci_4651 Delftia acidovorans SPH-1 hypothetical protein YP_001565665.1 5108498 R 398578 CDS YP_001565666.1 160900084 5750242 5109747..5111636 1 NC_010002.1 PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: aav:Aave_3053 nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite/sulfite reductase hemoprotein subunit beta 5111636 5750242 Daci_4652 Delftia acidovorans SPH-1 nitrite/sulfite reductase hemoprotein subunit beta YP_001565666.1 5109747 D 398578 CDS YP_001565667.1 160900085 5750243 5111665..5112048 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: aav:Aave_3054 uncharacterized conserved protein UCP030820; hypothetical protein 5112048 5750243 Daci_4653 Delftia acidovorans SPH-1 hypothetical protein YP_001565667.1 5111665 D 398578 CDS YP_001565668.1 160900086 5750244 5112050..5112808 1 NC_010002.1 PFAM: phosphoadenosine phosphosulfate reductase; KEGG: vei:Veis_4333 phosphoadenylyl-sulfate reductase (thioredoxin); phosphoadenylyl-sulfate reductase 5112808 5750244 Daci_4654 Delftia acidovorans SPH-1 phosphoadenylyl-sulfate reductase YP_001565668.1 5112050 D 398578 CDS YP_001565669.1 160900087 5750245 5112832..5113782 1 NC_010002.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 5113782 5750245 Daci_4655 Delftia acidovorans SPH-1 sulfate adenylyltransferase subunit 2 YP_001565669.1 5112832 D 398578 CDS YP_001565670.1 160900088 5750246 5113782..5115173 1 NC_010002.1 KEGG: aav:Aave_3056 sulfate adenylyltransferase, large subunit; TIGRFAM: sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor GTP-binding; sulfate adenylyltransferase large subunit 5115173 5750246 Daci_4656 Delftia acidovorans SPH-1 sulfate adenylyltransferase large subunit YP_001565670.1 5113782 D 398578 CDS YP_001565671.1 160900089 5750247 5115338..5115667 1 NC_010002.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: vei:Veis_4317 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 5115667 5750247 Daci_4657 Delftia acidovorans SPH-1 4Fe-4S ferredoxin YP_001565671.1 5115338 D 398578 CDS YP_001565672.1 160900090 5750248 5115681..5116733 1 NC_010002.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ajs:Ajs_1789 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 5116733 5750248 Daci_4658 Delftia acidovorans SPH-1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001565672.1 5115681 D 398578 CDS YP_001565673.1 160900091 5750249 5116806..5117093 1 NC_010002.1 KEGG: ajs:Ajs_1667 hypothetical protein; hypothetical protein 5117093 5750249 Daci_4659 Delftia acidovorans SPH-1 hypothetical protein YP_001565673.1 5116806 D 398578 CDS YP_001565674.1 160900092 5750250 complement(5117139..5117993) 1 NC_010002.1 catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine; phosphatidylserine decarboxylase 5117993 psd 5750250 psd Delftia acidovorans SPH-1 phosphatidylserine decarboxylase YP_001565674.1 5117139 R 398578 CDS YP_001565675.1 160900093 5750251 5118444..5118692 1 NC_010002.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 5118692 infA 5750251 infA Delftia acidovorans SPH-1 translation initiation factor IF-1 YP_001565675.1 5118444 D 398578 CDS YP_001565676.1 160900094 5750253 5119203..5119562 1 NC_010002.1 KEGG: rle:RL4672 hypothetical protein; hypothetical protein 5119562 5750253 Daci_4662 Delftia acidovorans SPH-1 hypothetical protein YP_001565676.1 5119203 D 398578 CDS YP_001565677.1 160900095 5750254 5119627..5120175 1 NC_010002.1 KEGG: par:Psyc_0986 possible neutral zinc metallopeptidase; putative neutral zinc metallopeptidase 5120175 5750254 Daci_4663 Delftia acidovorans SPH-1 putative neutral zinc metallopeptidase YP_001565677.1 5119627 D 398578 CDS YP_001565678.1 160900096 5750255 5120578..5120802 1 NC_010002.1 KEGG: mca:MCA1887 hypothetical protein; hypothetical protein 5120802 5750255 Daci_4664 Delftia acidovorans SPH-1 hypothetical protein YP_001565678.1 5120578 D 398578 CDS YP_001565679.1 160900097 5750256 complement(5121029..5121727) 1 NC_010002.1 PFAM: protein of unknown function DUF159; KEGG: pol:Bpro_1950 protein of unknown function DUF159; hypothetical protein 5121727 5750256 Daci_4665 Delftia acidovorans SPH-1 hypothetical protein YP_001565679.1 5121029 R 398578 CDS YP_001565680.1 160900098 5750257 5121781..5122059 1 NC_010002.1 hypothetical protein 5122059 5750257 Daci_4666 Delftia acidovorans SPH-1 hypothetical protein YP_001565680.1 5121781 D 398578 CDS YP_001565681.1 160900099 5750258 5122059..5122277 1 NC_010002.1 hypothetical protein 5122277 5750258 Daci_4667 Delftia acidovorans SPH-1 hypothetical protein YP_001565681.1 5122059 D 398578 CDS YP_001565682.1 160900100 5750259 5122287..5122535 1 NC_010002.1 hypothetical protein 5122535 5750259 Daci_4668 Delftia acidovorans SPH-1 hypothetical protein YP_001565682.1 5122287 D 398578 CDS YP_001565683.1 160900101 5750260 complement(5124522..5124803) 1 NC_010002.1 hypothetical protein 5124803 5750260 Daci_4669 Delftia acidovorans SPH-1 hypothetical protein YP_001565683.1 5124522 R 398578 CDS YP_001565684.1 160900102 5750261 complement(5124996..5125607) 1 NC_010002.1 PFAM: glycoside hydrolase family 24; KEGG: aav:Aave_1729 putative endolysin (lysis protein) (lysozyme); glycoside hydrolase family protein 5125607 5750261 Daci_4670 Delftia acidovorans SPH-1 glycoside hydrolase family protein YP_001565684.1 5124996 R 398578 CDS YP_001565685.1 160900103 5750262 complement(5125604..5125906) 1 NC_010002.1 hypothetical protein 5125906 5750262 Daci_4671 Delftia acidovorans SPH-1 hypothetical protein YP_001565685.1 5125604 R 398578 CDS YP_001565686.1 160900104 5750263 complement(5125915..5126349) 1 NC_010002.1 KEGG: aav:Aave_2373 hypothetical protein; hypothetical protein 5126349 5750263 Daci_4672 Delftia acidovorans SPH-1 hypothetical protein YP_001565686.1 5125915 R 398578 CDS YP_001565687.1 160900105 5750264 complement(5126355..5127155) 1 NC_010002.1 KEGG: mmu:100041170 similar to loricrin; loricrin-like protein 5127155 5750264 Daci_4673 Delftia acidovorans SPH-1 loricrin-like protein YP_001565687.1 5126355 R 398578 CDS YP_001565688.1 160900106 5750265 complement(5127152..5128168) 1 NC_010002.1 KEGG: rsq:Rsph17025_2083 hypothetical protein; hypothetical protein 5128168 5750265 Daci_4674 Delftia acidovorans SPH-1 hypothetical protein YP_001565688.1 5127152 R 398578 CDS YP_001565689.1 160900107 5750266 complement(5128165..5129115) 1 NC_010002.1 KEGG: aav:Aave_1783 carbohydrate-binding family V/XII; hypothetical protein 5129115 5750266 Daci_4675 Delftia acidovorans SPH-1 hypothetical protein YP_001565689.1 5128165 R 398578 CDS YP_001565690.1 160900108 5750267 complement(5129112..5133941) 1 NC_010002.1 KEGG: aav:Aave_1782 prophage tail length tape measure; hypothetical protein 5133941 5750267 Daci_4676 Delftia acidovorans SPH-1 hypothetical protein YP_001565690.1 5129112 R 398578 CDS YP_001565691.1 160900109 5750268 complement(5133957..5134412) 1 NC_010002.1 KEGG: nar:Saro_0659 hypothetical protein; hypothetical protein 5134412 5750268 Daci_4677 Delftia acidovorans SPH-1 hypothetical protein YP_001565691.1 5133957 R 398578 CDS YP_001565692.1 160900110 5750269 complement(5134421..5134891) 1 NC_010002.1 hypothetical protein 5134891 5750269 Daci_4678 Delftia acidovorans SPH-1 hypothetical protein YP_001565692.1 5134421 R 398578 CDS YP_001565693.1 160900111 5750270 complement(5134927..5135595) 1 NC_010002.1 KEGG: nar:Saro_0657 hypothetical protein; hypothetical protein 5135595 5750270 Daci_4679 Delftia acidovorans SPH-1 hypothetical protein YP_001565693.1 5134927 R 398578 CDS YP_001565694.1 160900112 5750271 complement(5135608..5136078) 1 NC_010002.1 hypothetical protein 5136078 5750271 Daci_4680 Delftia acidovorans SPH-1 hypothetical protein YP_001565694.1 5135608 R 398578 CDS YP_001565695.1 160900113 5750272 complement(5136080..5136388) 1 NC_010002.1 KEGG: pna:Pnap_2251 hypothetical protein; hypothetical protein 5136388 5750272 Daci_4681 Delftia acidovorans SPH-1 hypothetical protein YP_001565695.1 5136080 R 398578 CDS YP_001565696.1 160900114 5750273 complement(5136406..5136762) 1 NC_010002.1 KEGG: pna:Pnap_2252 putative RecA/RadA recombinase; putative RecA/RadA recombinase 5136762 5750273 Daci_4682 Delftia acidovorans SPH-1 putative RecA/RadA recombinase YP_001565696.1 5136406 R 398578 CDS YP_001565697.1 160900115 5750274 complement(5136804..5138885) 1 NC_010002.1 PFAM: peptidase U35 phage prohead HK97; KEGG: oan:Oant_1504 peptidase U35 phage prohead HK97; peptidase U35 phage prohead HK97 5138885 5750274 Daci_4683 Delftia acidovorans SPH-1 peptidase U35 phage prohead HK97 YP_001565697.1 5136804 R 398578 CDS YP_001565698.1 160900116 5750275 complement(5138939..5140441) 1 NC_010002.1 TIGRFAM: phage portal protein, lambda family; PFAM: portal protein lambda; KEGG: nwi:Nwi_0808 phage portal protein, lambda; lambda family phage portal protein 5140441 5750275 Daci_4684 Delftia acidovorans SPH-1 lambda family phage portal protein YP_001565698.1 5138939 R 398578 CDS YP_001565699.1 160900117 5750276 complement(5140444..5140674) 1 NC_010002.1 hypothetical protein 5140674 5750276 Daci_4685 Delftia acidovorans SPH-1 hypothetical protein YP_001565699.1 5140444 R 398578 CDS YP_001565700.1 160900118 5750277 complement(5140702..5141082) 1 NC_010002.1 PFAM: Resolvase helix-turn-helix domain protein; resolvase domain-containing protein 5141082 5750277 Daci_4686 Delftia acidovorans SPH-1 resolvase domain-containing protein YP_001565700.1 5140702 R 398578 CDS YP_001565701.1 160900119 5750278 complement(5141088..5143184) 1 NC_010002.1 PFAM: terminase GpA; KEGG: ssn:SSON_2430 putative DNA packaging protein of prophage; terminase GpA 5143184 5750278 Daci_4687 Delftia acidovorans SPH-1 terminase GpA YP_001565701.1 5141088 R 398578 CDS YP_001565702.1 160900120 5750279 complement(5143181..5143723) 1 NC_010002.1 KEGG: atc:AGR_C_800 hypothetical protein; hypothetical protein 5143723 5750279 Daci_4688 Delftia acidovorans SPH-1 hypothetical protein YP_001565702.1 5143181 R 398578 CDS YP_001565703.1 160900121 5750280 complement(5143869..5144939) 1 NC_010002.1 PFAM: protein of unknown function DUF1376; KEGG: xft:PD1347 hypothetical protein; hypothetical protein 5144939 5750280 Daci_4689 Delftia acidovorans SPH-1 hypothetical protein YP_001565703.1 5143869 R 398578 CDS YP_001565704.1 160900122 5750281 complement(5144964..5145305) 1 NC_010002.1 hypothetical protein 5145305 5750281 Daci_4690 Delftia acidovorans SPH-1 hypothetical protein YP_001565704.1 5144964 R 398578 CDS YP_001565705.1 160900123 5750282 complement(5145335..5146183) 1 NC_010002.1 KEGG: pna:Pnap_2259 hypothetical protein; hypothetical protein 5146183 5750282 Daci_4691 Delftia acidovorans SPH-1 hypothetical protein YP_001565705.1 5145335 R 398578 CDS YP_001565706.1 160900124 5750283 complement(5146173..5146709) 1 NC_010002.1 KEGG: pna:Pnap_2262 hypothetical protein; hypothetical protein 5146709 5750283 Daci_4692 Delftia acidovorans SPH-1 hypothetical protein YP_001565706.1 5146173 R 398578 CDS YP_001565707.1 160900125 5750284 5146716..5146979 1 NC_010002.1 hypothetical protein 5146979 5750284 Daci_4693 Delftia acidovorans SPH-1 hypothetical protein YP_001565707.1 5146716 D 398578 CDS YP_001565708.1 160900126 5750285 5147108..5147692 1 NC_010002.1 hypothetical protein 5147692 5750285 Daci_4694 Delftia acidovorans SPH-1 hypothetical protein YP_001565708.1 5147108 D 398578 CDS YP_001565709.1 160900127 5750286 5147710..5148021 1 NC_010002.1 hypothetical protein 5148021 5750286 Daci_4695 Delftia acidovorans SPH-1 hypothetical protein YP_001565709.1 5147710 D 398578 CDS YP_001565710.1 160900128 5750287 complement(5148026..5148268) 1 NC_010002.1 hypothetical protein 5148268 5750287 Daci_4696 Delftia acidovorans SPH-1 hypothetical protein YP_001565710.1 5148026 R 398578 CDS YP_001565711.1 160900129 5750288 5148542..5148946 1 NC_010002.1 hypothetical protein 5148946 5750288 Daci_4697 Delftia acidovorans SPH-1 hypothetical protein YP_001565711.1 5148542 D 398578 CDS YP_001565712.1 160900130 5750289 complement(5149576..5150907) 1 NC_010002.1 hypothetical protein 5150907 5750289 Daci_4698 Delftia acidovorans SPH-1 hypothetical protein YP_001565712.1 5149576 R 398578 CDS YP_001565713.1 160900131 5750290 5151452..5151703 1 NC_010002.1 hypothetical protein 5151703 5750290 Daci_4699 Delftia acidovorans SPH-1 hypothetical protein YP_001565713.1 5151452 D 398578 CDS YP_001565714.1 160900132 5750291 5151732..5151965 1 NC_010002.1 hypothetical protein 5151965 5750291 Daci_4700 Delftia acidovorans SPH-1 hypothetical protein YP_001565714.1 5151732 D 398578 CDS YP_001565715.1 160900133 5750292 5151999..5152655 1 NC_010002.1 hypothetical protein 5152655 5750292 Daci_4701 Delftia acidovorans SPH-1 hypothetical protein YP_001565715.1 5151999 D 398578 CDS YP_001565716.1 160900134 5750293 5152652..5153491 1 NC_010002.1 KEGG: pau:PA14_58970 hypothetical protein; hypothetical protein 5153491 5750293 Daci_4702 Delftia acidovorans SPH-1 hypothetical protein YP_001565716.1 5152652 D 398578 CDS YP_001565717.1 160900135 5750294 5153451..5153804 1 NC_010002.1 hypothetical protein 5153804 5750294 Daci_4703 Delftia acidovorans SPH-1 hypothetical protein YP_001565717.1 5153451 D 398578 CDS YP_001565718.1 160900136 5750295 5154929..5155789 1 NC_010002.1 PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: vei:Veis_3755 D12 class N6 adenine-specific DNA methyltransferase; D12 class N6 adenine-specific DNA methyltransferase 5155789 5750295 Daci_4704 Delftia acidovorans SPH-1 D12 class N6 adenine-specific DNA methyltransferase YP_001565718.1 5154929 D 398578 CDS YP_001565719.1 160900137 5750296 complement(5155856..5156350) 1 NC_010002.1 hypothetical protein 5156350 5750296 Daci_4705 Delftia acidovorans SPH-1 hypothetical protein YP_001565719.1 5155856 R 398578 CDS YP_001565720.1 160900138 5750297 complement(5156514..5157449) 1 NC_010002.1 KEGG: aav:Aave_4521 hypothetical protein; hypothetical protein 5157449 5750297 Daci_4706 Delftia acidovorans SPH-1 hypothetical protein YP_001565720.1 5156514 R 398578 CDS YP_001565721.1 160900139 5750298 5157591..5157821 1 NC_010002.1 hypothetical protein 5157821 5750298 Daci_4707 Delftia acidovorans SPH-1 hypothetical protein YP_001565721.1 5157591 D 398578 CDS YP_001565722.1 160900140 5750299 5157818..5158846 1 NC_010002.1 PFAM: integrase family protein; KEGG: bbr:BB1661 integrase; integrase family protein 5158846 5750299 Daci_4708 Delftia acidovorans SPH-1 integrase family protein YP_001565722.1 5157818 D 398578 CDS YP_001565723.1 160900141 5750300 5159260..5159694 1 NC_010002.1 KEGG: ypi:YpsIP31758_3075 putative lipoprotein; putative lipoprotein 5159694 5750300 Daci_4709 Delftia acidovorans SPH-1 putative lipoprotein YP_001565723.1 5159260 D 398578 CDS YP_001565724.1 160900142 5750301 complement(5159766..5160389) 1 NC_010002.1 PFAM: Glutathione S-transferase domain; KEGG: pfl:PFL_4586 glutathione S-transferase; glutathione S-transferase domain-containing protein 5160389 5750301 Daci_4710 Delftia acidovorans SPH-1 glutathione S-transferase domain-containing protein YP_001565724.1 5159766 R 398578 CDS YP_001565725.1 160900143 5750302 5160491..5160955 1 NC_010002.1 PFAM: ribonuclease H; KEGG: pol:Bpro_4830 ribonuclease H; ribonuclease H 5160955 5750302 Daci_4711 Delftia acidovorans SPH-1 ribonuclease H YP_001565725.1 5160491 D 398578 CDS YP_001565726.1 160900144 5750303 complement(5161015..5161341) 1 NC_010002.1 KEGG: bbr:BB2884 hypothetical protein; hypothetical protein 5161341 5750303 Daci_4712 Delftia acidovorans SPH-1 hypothetical protein YP_001565726.1 5161015 R 398578 CDS YP_001565727.1 160900145 5750304 complement(5162323..5166177) 1 NC_010002.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: ana:alr0276 hypothetical protein; endonuclease/exonuclease/phosphatase 5166177 5750304 Daci_4713 Delftia acidovorans SPH-1 endonuclease/exonuclease/phosphatase YP_001565727.1 5162323 R 398578 CDS YP_001565728.1 160900146 5750305 5166599..5166895 1 NC_010002.1 PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: aav:Aave_1150 histone family protein nucleoid-structuring protein H-NS; histone family protein nucleoid-structuring protein H-NS 5166895 5750305 Daci_4714 Delftia acidovorans SPH-1 histone family protein nucleoid-structuring protein H-NS YP_001565728.1 5166599 D 398578 CDS YP_001565729.1 160900147 5750306 5166992..5167210 1 NC_010002.1 hypothetical protein 5167210 5750306 Daci_4715 Delftia acidovorans SPH-1 hypothetical protein YP_001565729.1 5166992 D 398578 CDS YP_001565730.1 160900148 5750308 complement(5167743..5168408) 1 NC_010002.1 TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pol:Bpro_1798 phosphoglycolate phosphatase; phosphoglycolate phosphatase 5168408 5750308 Daci_4716 Delftia acidovorans SPH-1 phosphoglycolate phosphatase YP_001565730.1 5167743 R 398578 CDS YP_001565731.1 160900149 5750309 complement(5168414..5169136) 1 NC_010002.1 Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase 5169136 5750309 Daci_4717 Delftia acidovorans SPH-1 3-demethylubiquinone-9 3-methyltransferase YP_001565731.1 5168414 R 398578 CDS YP_001565732.1 160900150 5750310 complement(5169221..5169880) 1 NC_010002.1 PFAM: OmpA/MotB domain protein; KEGG: aav:Aave_3279 OmpA/MotB domain protein; OmpA/MotB domain-containing protein 5169880 5750310 Daci_4718 Delftia acidovorans SPH-1 OmpA/MotB domain-containing protein YP_001565732.1 5169221 R 398578 CDS YP_001565733.1 160900151 5750311 5170110..5172776 1 NC_010002.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 5172776 5750311 Daci_4719 Delftia acidovorans SPH-1 DNA gyrase subunit A YP_001565733.1 5170110 D 398578 CDS YP_001565734.1 160900152 5750312 5172899..5174008 1 NC_010002.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 5174008 5750312 Daci_4720 Delftia acidovorans SPH-1 phosphoserine aminotransferase YP_001565734.1 5172899 D 398578 CDS YP_001565735.1 160900153 5750313 5174028..5175128 1 NC_010002.1 TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase; amino acid-binding ACT domain protein; KEGG: ajs:Ajs_2466 chorismate mutase; chorismate mutase 5175128 5750313 Daci_4721 Delftia acidovorans SPH-1 chorismate mutase YP_001565735.1 5174028 D 398578 CDS YP_001565736.1 160900154 5750314 5175128..5176006 1 NC_010002.1 PFAM: Prephenate dehydrogenase; NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; Ketopantoate reductase ApbA/PanE domain protein; KEGG: aav:Aave_3283 prephenate dehydrogenase; prephenate dehydrogenase 5176006 5750314 Daci_4722 Delftia acidovorans SPH-1 prephenate dehydrogenase YP_001565736.1 5175128 D 398578 CDS YP_001565737.1 160900155 5750315 5176121..5178148 1 NC_010002.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; catalyzes CMP phosphorylation; bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidine monophosphate kinase 5178148 5750315 Daci_4723 Delftia acidovorans SPH-1 bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidine monophosphate kinase YP_001565737.1 5176121 D 398578 CDS YP_001565738.1 160900156 5750316 5178334..5180019 1 NC_010002.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 5180019 rpsA 5750316 rpsA Delftia acidovorans SPH-1 30S ribosomal protein S1 YP_001565738.1 5178334 D 398578 CDS YP_001565739.1 160900157 5750317 5180110..5180451 1 NC_010002.1 TIGRFAM: integration host factor, beta subunit; PFAM: histone family protein DNA-binding protein; KEGG: aav:Aave_3286 histone family protein DNA-binding protein; integration host factor subunit beta 5180451 5750317 Daci_4725 Delftia acidovorans SPH-1 integration host factor subunit beta YP_001565739.1 5180110 D 398578 CDS YP_001565740.1 160900158 5750318 5180532..5180852 1 NC_010002.1 KEGG: aav:Aave_3287 hypothetical protein; hypothetical protein 5180852 5750318 Daci_4726 Delftia acidovorans SPH-1 hypothetical protein YP_001565740.1 5180532 D 398578 CDS YP_001565741.1 160900159 5750319 5180842..5182017 1 NC_010002.1 SMART: Tetratricopeptide domain protein; KEGG: vei:Veis_3911 tetratricopeptide TPR_4; hypothetical protein 5182017 5750319 Daci_4727 Delftia acidovorans SPH-1 hypothetical protein YP_001565741.1 5180842 D 398578 CDS YP_001565742.1 160900160 5750320 5182278..5182688 1 NC_010002.1 KEGG: pol:Bpro_1783 hypothetical protein; hypothetical protein 5182688 5750320 Daci_4728 Delftia acidovorans SPH-1 hypothetical protein YP_001565742.1 5182278 D 398578 CDS YP_001565743.1 160900161 5750321 5182828..5185806 1 NC_010002.1 subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+; putative monovalent cation/H+ antiporter subunit A 5185806 5750321 Daci_4729 Delftia acidovorans SPH-1 putative monovalent cation/H+ antiporter subunit A YP_001565743.1 5182828 D 398578 CDS YP_001565744.1 160900162 5750322 5185806..5186171 1 NC_010002.1 subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit C 5186171 5750322 Daci_4730 Delftia acidovorans SPH-1 putative monovalent cation/H+ antiporter subunit C YP_001565744.1 5185806 D 398578 CDS YP_001565745.1 160900163 5750323 5186168..5187964 1 NC_010002.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; putative monovalent cation/H+ antiporter subunit D 5187964 5750323 Daci_4731 Delftia acidovorans SPH-1 putative monovalent cation/H+ antiporter subunit D YP_001565745.1 5186168 D 398578 CDS YP_001565746.1 160900164 5750324 5187961..5188452 1 NC_010002.1 subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; putative monovalent cation/H+ antiporter subunit E 5188452 5750324 Daci_4732 Delftia acidovorans SPH-1 putative monovalent cation/H+ antiporter subunit E YP_001565746.1 5187961 D 398578 CDS YP_001565747.1 160900165 5750325 5188449..5188727 1 NC_010002.1 PFAM: multiple resistance and pH regulation protein F; KEGG: vei:Veis_3905 multiple resistance and pH regulation protein F; multiple resistance and pH regulation protein F 5188727 5750325 Daci_4733 Delftia acidovorans SPH-1 multiple resistance and pH regulation protein F YP_001565747.1 5188449 D 398578 CDS YP_001565748.1 160900166 5750326 5188724..5189107 1 NC_010002.1 PFAM: Na+/H+ antiporter subunit; KEGG: ajs:Ajs_2479 Na+/H+ antiporter subunit; Na+/H+ antiporter subunit 5189107 5750326 Daci_4734 Delftia acidovorans SPH-1 Na+/H+ antiporter subunit YP_001565748.1 5188724 D 398578 CDS YP_001565749.1 160900167 5750327 5189351..5190220 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_2487 conserved hypothetical protein 730; hypothetical protein 5190220 5750327 Daci_4735 Delftia acidovorans SPH-1 hypothetical protein YP_001565749.1 5189351 D 398578 CDS YP_001565750.1 160900168 5750328 complement(5190273..5191454) 1 NC_010002.1 PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_2488 major facilitator superfamily MFS_1; major facilitator transporter 5191454 5750328 Daci_4736 Delftia acidovorans SPH-1 major facilitator transporter YP_001565750.1 5190273 R 398578 CDS YP_001565751.1 160900169 5750329 complement(5191456..5192985) 1 NC_010002.1 PFAM: protein of unknown function DUF195; KEGG: ajs:Ajs_2489 protein of unknown function DUF195; hypothetical protein 5192985 5750329 Daci_4737 Delftia acidovorans SPH-1 hypothetical protein YP_001565751.1 5191456 R 398578 CDS YP_001565752.1 160900170 5750330 complement(5193057..5194064) 1 NC_010002.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: vei:Veis_2069 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 5194064 5750330 Daci_4738 Delftia acidovorans SPH-1 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_001565752.1 5193057 R 398578 CDS YP_001565753.1 160900171 5750331 complement(5194102..5195529) 1 NC_010002.1 KEGG: ajs:Ajs_2491 putative transmembrane protein; putative transmembrane protein 5195529 5750331 Daci_4739 Delftia acidovorans SPH-1 putative transmembrane protein YP_001565753.1 5194102 R 398578 CDS YP_001565754.1 160900172 5750332 complement(5195591..5196811) 1 NC_010002.1 catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 5196811 5750332 Daci_4740 Delftia acidovorans SPH-1 nicotinate phosphoribosyltransferase YP_001565754.1 5195591 R 398578 CDS YP_001565755.1 160900173 5750333 complement(5196927..5197388) 1 NC_010002.1 PFAM: thioesterase superfamily protein; KEGG: rfr:Rfer_2141 thioesterase superfamily; thioesterase superfamily protein 5197388 5750333 Daci_4741 Delftia acidovorans SPH-1 thioesterase superfamily protein YP_001565755.1 5196927 R 398578 CDS YP_001565756.1 160900174 5750334 5197713..5198261 1 NC_010002.1 TIGRFAM: phasin family protein; PFAM: Phasin family protein; KEGG: vei:Veis_2554 phasin family protein; phasin family protein 5198261 5750334 Daci_4742 Delftia acidovorans SPH-1 phasin family protein YP_001565756.1 5197713 D 398578 CDS YP_001565757.1 160900175 5750335 5198563..5199609 1 NC_010002.1 PFAM: extracellular solute-binding protein family 1; KEGG: ajs:Ajs_1607 extracellular solute-binding protein, family 1; extracellular solute-binding protein 5199609 5750335 Daci_4743 Delftia acidovorans SPH-1 extracellular solute-binding protein YP_001565757.1 5198563 D 398578 CDS YP_001565758.1 160900176 5750336 5199741..5200499 1 NC_010002.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ajs:Ajs_1606 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 5200499 5750336 Daci_4744 Delftia acidovorans SPH-1 short-chain dehydrogenase/reductase SDR YP_001565758.1 5199741 D 398578 CDS YP_001565759.1 160900177 5750337 complement(5200653..5201507) 1 NC_010002.1 KEGG: bmn:BMA10247_0877 hypothetical protein; hypothetical protein 5201507 5750337 Daci_4745 Delftia acidovorans SPH-1 hypothetical protein YP_001565759.1 5200653 R 398578 CDS YP_001565760.1 160900178 5750338 complement(5201529..5203244) 1 NC_010002.1 KEGG: aav:Aave_3724 cyclic peptide transporter; TIGRFAM: cyclic peptide transporter; PFAM: ABC transporter related; SMART: AAA ATPase; cyclic peptide transporter 5203244 5750338 Daci_4746 Delftia acidovorans SPH-1 cyclic peptide transporter YP_001565760.1 5201529 R 398578 CDS YP_001565761.1 160900179 5750339 5203490..5204455 1 NC_010002.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: nmu:Nmul_A1827 lipolytic enzyme; alpha/beta hydrolase domain-containing protein 5204455 5750339 Daci_4747 Delftia acidovorans SPH-1 alpha/beta hydrolase domain-containing protein YP_001565761.1 5203490 D 398578 CDS YP_001565762.1 160900180 5750340 5204515..5205717 1 NC_010002.1 KEGG: nmu:Nmul_A1824 hypothetical protein; hypothetical protein 5205717 5750340 Daci_4748 Delftia acidovorans SPH-1 hypothetical protein YP_001565762.1 5204515 D 398578 CDS YP_001565763.1 160900181 5750341 5205729..5207027 1 NC_010002.1 KEGG: nmu:Nmul_A1825 L-lysine 6-monooxygenase (NADPH); L-lysine 6-monooxygenase 5207027 5750341 Daci_4749 Delftia acidovorans SPH-1 L-lysine 6-monooxygenase YP_001565763.1 5205729 D 398578 CDS YP_001565764.1 160900182 5750342 5207240..5207839 1 NC_010002.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: pen:PSEEN4328 RNA polymerase sigma-70 factor, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 5207839 5750342 Daci_4750 Delftia acidovorans SPH-1 ECF subfamily RNA polymerase sigma-24 factor YP_001565764.1 5207240 D 398578 CDS YP_001565765.1 160900183 5750343 5207852..5208886 1 NC_010002.1 PFAM: FecR protein; KEGG: pen:PSEEN1038 FecR-like transmembrane sensor; anti-FecI sigma factor FecR 5208886 5750343 Daci_4751 Delftia acidovorans SPH-1 anti-FecI sigma factor FecR YP_001565765.1 5207852 D 398578 CDS YP_001565766.1 160900184 5750344 complement(5208963..5211362) 1 NC_010002.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: mms:mma_2028 ferric siderophore receptor; TonB-dependent siderophore receptor 5211362 5750344 Daci_4752 Delftia acidovorans SPH-1 TonB-dependent siderophore receptor YP_001565766.1 5208963 R 398578 CDS YP_001565767.1 160900185 5750345 complement(5211544..5230074) 1 NC_010002.1 TIGRFAM: non-ribosomal peptide synthase; amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; phosphopantetheine-binding; KEGG: bbt:BBta_6813 arthrofactin synthetase/syringopeptin synthetase C-related non-ribosomal peptide synthetase; amino acid adenylation domain-containing protein 5230074 5750345 Daci_4753 Delftia acidovorans SPH-1 amino acid adenylation domain-containing protein YP_001565767.1 5211544 R 398578 CDS YP_001565768.1 160900186 5750346 complement(5230074..5240069) 1 NC_010002.1 TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: bpl:BURPS1106A_A2212 non-ribosomal peptide synthase; amino acid adenylation domain-containing protein 5240069 5750346 Daci_4754 Delftia acidovorans SPH-1 amino acid adenylation domain-containing protein YP_001565768.1 5230074 R 398578 CDS YP_001565769.1 160900187 5750347 complement(5240032..5244714) 1 NC_010002.1 PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase ; Acyl transferase; KEGG: aav:Aave_3732 beta-ketoacyl synthase; beta-ketoacyl synthase 5244714 5750347 Daci_4755 Delftia acidovorans SPH-1 beta-ketoacyl synthase YP_001565769.1 5240032 R 398578 CDS YP_001565770.1 160900188 5750348 complement(5244714..5250083) 1 NC_010002.1 TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: aav:Aave_3733 amino acid adenylation domain; amino acid adenylation domain-containing protein 5250083 5750348 Daci_4756 Delftia acidovorans SPH-1 amino acid adenylation domain-containing protein YP_001565770.1 5244714 R 398578 CDS YP_001565771.1 160900189 5750349 complement(5250104..5251093) 1 NC_010002.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: aav:Aave_3734 taurine catabolism dioxygenase TauD/TfdA; taurine catabolism dioxygenase TauD/TfdA 5251093 5750349 Daci_4757 Delftia acidovorans SPH-1 taurine catabolism dioxygenase TauD/TfdA YP_001565771.1 5250104 R 398578 CDS YP_001565772.1 160900190 5750350 complement(5251090..5251779) 1 NC_010002.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: nmu:Nmul_A1833 4'-phosphopantetheinyl transferase; 4'-phosphopantetheinyl transferase 5251779 5750350 Daci_4758 Delftia acidovorans SPH-1 4'-phosphopantetheinyl transferase YP_001565772.1 5251090 R 398578 CDS YP_001565773.1 160900191 5750351 complement(5251757..5252500) 1 NC_010002.1 PFAM: Thioesterase; KEGG: nmu:Nmul_A1834 thioesterase; thioesterase 5252500 5750351 Daci_4759 Delftia acidovorans SPH-1 thioesterase YP_001565773.1 5251757 R 398578 CDS YP_001565774.1 160900192 5750352 complement(5252506..5252871) 1 NC_010002.1 PFAM: MbtH domain protein; KEGG: aav:Aave_3736 MbtH domain protein; MbtH domain-containing protein 5252871 5750352 Daci_4760 Delftia acidovorans SPH-1 MbtH domain-containing protein YP_001565774.1 5252506 R 398578 CDS YP_001565775.1 160900193 5750353 complement(5252942..5253466) 1 NC_010002.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: aav:Aave_3737 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 5253466 5750353 Daci_4761 Delftia acidovorans SPH-1 ECF subfamily RNA polymerase sigma-24 factor YP_001565775.1 5252942 R 398578 CDS YP_001565776.1 160900194 5750357 complement(5254614..5254949) 1 NC_010002.1 PFAM: nitrogen regulatory protein P-II; KEGG: dar:Daro_0297 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 5254949 5750357 Daci_4762 Delftia acidovorans SPH-1 nitrogen regulatory protein P-II YP_001565776.1 5254614 R 398578 CDS YP_001565777.1 160900195 5750358 complement(5254966..5258055) 1 NC_010002.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: neu:NE0375 acriflavin resistance protein:heavy metal efflux pump CzcA; CzcA family heavy metal efflux protein 5258055 5750358 Daci_4763 Delftia acidovorans SPH-1 CzcA family heavy metal efflux protein YP_001565777.1 5254966 R 398578 CDS YP_001565778.1 160900196 5750359 complement(5258060..5259277) 1 NC_010002.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dar:Daro_0295 secretion protein HlyD; RND family efflux transporter MFP subunit 5259277 5750359 Daci_4764 Delftia acidovorans SPH-1 RND family efflux transporter MFP subunit YP_001565778.1 5258060 R 398578 CDS YP_001565779.1 160900197 5750360 complement(5259319..5260776) 1 NC_010002.1 PFAM: outer membrane efflux protein; KEGG: rso:RS00407 putative outer membrane cation efflux system protein; outer membrane efflux protein 5260776 5750360 Daci_4765 Delftia acidovorans SPH-1 outer membrane efflux protein YP_001565779.1 5259319 R 398578 CDS YP_001565780.1 160900198 5750361 complement(5260994..5261398) 1 NC_010002.1 hypothetical protein 5261398 5750361 Daci_4766 Delftia acidovorans SPH-1 hypothetical protein YP_001565780.1 5260994 R 398578 CDS YP_001565781.1 160900199 5750370 complement(5262625..5264031) 1 NC_010002.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 5264031 gltX 5750370 gltX Delftia acidovorans SPH-1 glutamyl-tRNA synthetase YP_001565781.1 5262625 R 398578 CDS YP_001565782.1 160900200 5750371 complement(5264028..5265386) 1 NC_010002.1 KEGG: ajs:Ajs_2735 O-succinylhomoserine sulfhydrylase; TIGRFAM: O-succinylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; O-succinylhomoserine sulfhydrylase 5265386 5750371 Daci_4768 Delftia acidovorans SPH-1 O-succinylhomoserine sulfhydrylase YP_001565782.1 5264028 R 398578 CDS YP_001565783.1 160900201 5750372 complement(5265462..5266970) 1 NC_010002.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 5266970 5750372 Daci_4769 Delftia acidovorans SPH-1 amidophosphoribosyltransferase YP_001565783.1 5265462 R 398578 CDS YP_001565784.1 160900202 5750373 complement(5267104..5267595) 1 NC_010002.1 PFAM: Colicin V production protein; KEGG: aav:Aave_1862 colicin V production protein; colicin V production protein 5267595 5750373 Daci_4770 Delftia acidovorans SPH-1 colicin V production protein YP_001565784.1 5267104 R 398578 CDS YP_001565785.1 160900203 5750374 complement(5267645..5268592) 1 NC_010002.1 PFAM: Sporulation domain protein; KEGG: ajs:Ajs_2738 sporulation domain protein; sporulation domain-containing protein 5268592 5750374 Daci_4771 Delftia acidovorans SPH-1 sporulation domain-containing protein YP_001565785.1 5267645 R 398578 CDS YP_001565786.1 160900204 5750375 complement(5268663..5269985) 1 NC_010002.1 TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: ajs:Ajs_2739 FolC bifunctional protein; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 5269985 5750375 Daci_4772 Delftia acidovorans SPH-1 bifunctional folylpolyglutamate synthase/ dihydrofolate synthase YP_001565786.1 5268663 R 398578 CDS YP_001565787.1 160900205 5750376 5270083..5270442 1 NC_010002.1 PFAM: arsenate reductase and related; KEGG: ajs:Ajs_2740 arsenate reductase and related; arsenate reductase-like protein 5270442 5750376 Daci_4773 Delftia acidovorans SPH-1 arsenate reductase-like protein YP_001565787.1 5270083 D 398578 CDS YP_001565788.1 160900206 5750377 5270672..5271313 1 NC_010002.1 PFAM: 17 kDa surface antigen; KEGG: ajs:Ajs_2741 17 kDa surface antigen; 17 kDa surface antigen 5271313 5750377 Daci_4774 Delftia acidovorans SPH-1 17 kDa surface antigen YP_001565788.1 5270672 D 398578 CDS YP_001565789.1 160900207 5750378 5271441..5271758 1 NC_010002.1 PFAM: protein of unknown function DUF1255; KEGG: rso:RSc2552 hypothetical protein; hypothetical protein 5271758 5750378 Daci_4775 Delftia acidovorans SPH-1 hypothetical protein YP_001565789.1 5271441 D 398578 CDS YP_001565790.1 160900208 5750379 5271877..5273211 1 NC_010002.1 catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis; argininosuccinate synthase 5273211 5750379 Daci_4776 Delftia acidovorans SPH-1 argininosuccinate synthase YP_001565790.1 5271877 D 398578 CDS YP_001565791.1 160900209 5750380 complement(5273413..5274312) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: cvi:CV_2939 probable transcriptional regulator; LysR family transcriptional regulator 5274312 5750380 Daci_4777 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001565791.1 5273413 R 398578 CDS YP_001565792.1 160900210 5750381 5274451..5275320 1 NC_010002.1 PFAM: beta-lactamase domain protein; KEGG: hch:HCH_01185 Zn-dependent hydrolase, including glyoxylases; beta-lactamase domain-containing protein 5275320 5750381 Daci_4778 Delftia acidovorans SPH-1 beta-lactamase domain-containing protein YP_001565792.1 5274451 D 398578 CDS YP_001565793.1 160900211 5750382 5275419..5275784 1 NC_010002.1 PFAM: SPW repeat; KEGG: pol:Bpro_2330 hypothetical protein; SPW repeat-containing protein 5275784 5750382 Daci_4779 Delftia acidovorans SPH-1 SPW repeat-containing protein YP_001565793.1 5275419 D 398578 CDS YP_001565794.1 160900212 5750383 complement(5275865..5276965) 1 NC_010002.1 KEGG: aav:Aave_1855 UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: FAD linked oxidase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase 5276965 5750383 Daci_4780 Delftia acidovorans SPH-1 UDP-N-acetylenolpyruvoylglucosamine reductase YP_001565794.1 5275865 R 398578 CDS YP_001565795.1 160900213 5750384 5277070..5277555 1 NC_010002.1 putative nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; putative nucleotide-binding protein 5277555 5750384 Daci_4781 Delftia acidovorans SPH-1 putative nucleotide-binding protein YP_001565795.1 5277070 D 398578 CDS YP_001565796.1 160900214 5750385 5277590..5278255 1 NC_010002.1 KEGG: aav:Aave_1853 hypothetical protein; hypothetical protein 5278255 5750385 Daci_4782 Delftia acidovorans SPH-1 hypothetical protein YP_001565796.1 5277590 D 398578 CDS YP_001565797.1 160900215 5750386 5278296..5279285 1 NC_010002.1 KEGG: aav:Aave_1852 putative metal dependent phosphohydrolase; putative metal dependent phosphohydrolase 5279285 5750386 Daci_4783 Delftia acidovorans SPH-1 putative metal dependent phosphohydrolase YP_001565797.1 5278296 D 398578 CDS YP_001565798.1 160900216 5750387 complement(5279331..5281073) 1 NC_010002.1 KEGG: ajs:Ajs_4093 twin-arginine translocation pathway signal; twin-arginine translocation pathway signal protein 5281073 5750387 Daci_4784 Delftia acidovorans SPH-1 twin-arginine translocation pathway signal protein YP_001565798.1 5279331 R 398578 CDS YP_001565799.1 160900217 5750388 complement(5281070..5282653) 1 NC_010002.1 catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase 5282653 5750388 Daci_4785 Delftia acidovorans SPH-1 spermidine synthase YP_001565799.1 5281070 R 398578 CDS YP_001565800.1 160900218 5750389 complement(5282702..5284840) 1 NC_010002.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: acb:A1S_3339 putative ferric siderophore receptor protein; TonB-dependent siderophore receptor 5284840 5750389 Daci_4786 Delftia acidovorans SPH-1 TonB-dependent siderophore receptor YP_001565800.1 5282702 R 398578 CDS YP_001565801.1 160900219 5750390 complement(5285031..5285249) 1 NC_010002.1 PFAM: protein of unknown function DUF350; KEGG: ajs:Ajs_4097 protein of unknown function DUF350; hypothetical protein 5285249 5750390 Daci_4787 Delftia acidovorans SPH-1 hypothetical protein YP_001565801.1 5285031 R 398578 CDS YP_001565802.1 160900220 5750391 complement(5285268..5286800) 1 NC_010002.1 KEGG: aav:Aave_4739 putative transmembrane protein; putative transmembrane protein 5286800 5750391 Daci_4788 Delftia acidovorans SPH-1 putative transmembrane protein YP_001565802.1 5285268 R 398578 CDS YP_001565803.1 160900221 5750392 complement(5286899..5287579) 1 NC_010002.1 PFAM: protein of unknown function DUF205; KEGG: aav:Aave_1851 protein of unknown function DUF205; hypothetical protein 5287579 5750392 Daci_4789 Delftia acidovorans SPH-1 hypothetical protein YP_001565803.1 5286899 R 398578 CDS YP_001565804.1 160900222 5750393 complement(5287748..5288242) 1 NC_010002.1 TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: ajs:Ajs_2754 YbaK/EbsC protein; ybaK/ebsC protein 5288242 5750393 Daci_4790 Delftia acidovorans SPH-1 ybaK/ebsC protein YP_001565804.1 5287748 R 398578 CDS YP_001565805.1 160900223 5750394 5288300..5288848 1 NC_010002.1 KEGG: rpa:RPA0928 hypothetical protein; hypothetical protein 5288848 5750394 Daci_4791 Delftia acidovorans SPH-1 hypothetical protein YP_001565805.1 5288300 D 398578 CDS YP_001565806.1 160900224 5750395 5288851..5289066 1 NC_010002.1 PFAM: helix-turn-helix domain protein; KEGG: xau:Xaut_0314 putative transcriptional regulator, XRE family; XRE family transcriptional regulator 5289066 5750395 Daci_4792 Delftia acidovorans SPH-1 XRE family transcriptional regulator YP_001565806.1 5288851 D 398578 CDS YP_001565807.1 160900225 5750396 5289042..5289686 1 NC_010002.1 KEGG: rfr:Rfer_1530 hypothetical protein; hypothetical protein 5289686 5750396 Daci_4793 Delftia acidovorans SPH-1 hypothetical protein YP_001565807.1 5289042 D 398578 CDS YP_001565808.1 160900226 5750397 complement(5289704..5290780) 1 NC_010002.1 PFAM: aldo/keto reductase; KEGG: aav:Aave_1849 aldo/keto reductase; aldo/keto reductase 5290780 5750397 Daci_4794 Delftia acidovorans SPH-1 aldo/keto reductase YP_001565808.1 5289704 R 398578 CDS YP_001565809.1 160900227 5750398 complement(5290870..5291964) 1 NC_010002.1 KEGG: reu:Reut_B4501 4-hydroxyphenylpyruvate dioxygenase; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 4-hydroxyphenylpyruvate dioxygenase 5291964 5750398 Daci_4795 Delftia acidovorans SPH-1 4-hydroxyphenylpyruvate dioxygenase YP_001565809.1 5290870 R 398578 CDS YP_001565810.1 160900228 5750399 complement(5291986..5293410) 1 NC_010002.1 PFAM: amino acid permease-associated region; KEGG: pau:PA14_53050 aromatic amino acid transport protein AroP2; amino acid permease-associated protein 5293410 5750399 Daci_4796 Delftia acidovorans SPH-1 amino acid permease-associated protein YP_001565810.1 5291986 R 398578 CDS YP_001565811.1 160900229 5750400 5293731..5294381 1 NC_010002.1 PFAM: regulatory protein TetR; KEGG: bch:Bcen2424_5654 transcriptional regulator, TetR family; TetR family transcriptional regulator 5294381 5750400 Daci_4797 Delftia acidovorans SPH-1 TetR family transcriptional regulator YP_001565811.1 5293731 D 398578 CDS YP_001565812.1 160900230 5750401 complement(5294351..5295265) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bpa:BPP2057 LysR-family transcriptional regulator; LysR family transcriptional regulator 5295265 5750401 Daci_4798 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001565812.1 5294351 R 398578 CDS YP_001565813.1 160900231 5750402 complement(5295349..5296440) 1 NC_010002.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bbr:BB1451 probable ATP-binding component of ABC transporter; ABC transporter-like protein 5296440 5750402 Daci_4799 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001565813.1 5295349 R 398578 CDS YP_001565814.1 160900232 5750403 complement(5296447..5298186) 1 NC_010002.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbr:BB1452 probable permease component of ABC transporter; binding-protein-dependent transport system inner membrane protein 5298186 5750403 Daci_4800 Delftia acidovorans SPH-1 binding-protein-dependent transport system inner membrane protein YP_001565814.1 5296447 R 398578 CDS YP_001565815.1 160900233 5750404 complement(5298272..5299600) 1 NC_010002.1 PFAM: extracellular solute-binding protein family 1; KEGG: bbr:BB1453 putative regulatory lipoprotein; extracellular solute-binding protein 5299600 5750404 Daci_4801 Delftia acidovorans SPH-1 extracellular solute-binding protein YP_001565815.1 5298272 R 398578 CDS YP_001565816.1 160900234 5750405 5299802..5300116 1 NC_010002.1 KEGG: pol:Bpro_1534 hypothetical protein; hypothetical protein 5300116 5750405 Daci_4802 Delftia acidovorans SPH-1 hypothetical protein YP_001565816.1 5299802 D 398578 CDS YP_001565817.1 160900235 5750406 5300128..5300514 1 NC_010002.1 KEGG: bbr:BB3159 hypothetical protein; hypothetical protein 5300514 5750406 Daci_4803 Delftia acidovorans SPH-1 hypothetical protein YP_001565817.1 5300128 D 398578 CDS YP_001565818.1 160900236 5750407 5300618..5301595 1 NC_010002.1 PFAM: alpha/beta hydrolase fold; KEGG: ajs:Ajs_2756 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 5301595 5750407 Daci_4804 Delftia acidovorans SPH-1 alpha/beta hydrolase fold protein YP_001565818.1 5300618 D 398578 CDS YP_001565819.1 160900237 5750408 complement(5301641..5304175) 1 NC_010002.1 PFAM: peptidase S45 penicillin amidase; KEGG: pol:Bpro_2452 penicillin amidase; peptidase S45 penicillin amidase 5304175 5750408 Daci_4805 Delftia acidovorans SPH-1 peptidase S45 penicillin amidase YP_001565819.1 5301641 R 398578 CDS YP_001565820.1 160900238 5750409 5304361..5304741 1 NC_010002.1 hypothetical protein 5304741 5750409 Daci_4806 Delftia acidovorans SPH-1 hypothetical protein YP_001565820.1 5304361 D 398578 CDS YP_001565821.1 160900239 5750410 complement(5304895..5305644) 1 NC_010002.1 PFAM: fatty acid hydroxylase; KEGG: cvi:CV_2371 hypothetical protein; fatty acid hydroxylase 5305644 5750410 Daci_4807 Delftia acidovorans SPH-1 fatty acid hydroxylase YP_001565821.1 5304895 R 398578 CDS YP_001565822.1 160900240 5750411 complement(5305664..5306743) 1 NC_010002.1 PFAM: peptidase U61 LD-carboxypeptidase A; KEGG: ajs:Ajs_2281 muramoyltetrapeptide carboxypeptidase; muramoyltetrapeptide carboxypeptidase 5306743 5750411 Daci_4808 Delftia acidovorans SPH-1 muramoyltetrapeptide carboxypeptidase YP_001565822.1 5305664 R 398578 CDS YP_001565823.1 160900241 5750412 complement(5306967..5308394) 1 NC_010002.1 PFAM: alpha/beta hydrolase fold; CMP/dCMP deaminase zinc-binding; KEGG: aav:Aave_3082 CMP/dCMP deaminase, zinc-binding; CMP/dCMP deaminase 5308394 5750412 Daci_4809 Delftia acidovorans SPH-1 CMP/dCMP deaminase YP_001565823.1 5306967 R 398578 CDS YP_001565824.1 160900242 5750413 complement(5308363..5309631) 1 NC_010002.1 PFAM: Extracellular ligand-binding receptor; KEGG: aav:Aave_3084 extracellular ligand-binding receptor; extracellular ligand-binding receptor 5309631 5750413 Daci_4810 Delftia acidovorans SPH-1 extracellular ligand-binding receptor YP_001565824.1 5308363 R 398578 CDS YP_001565825.1 160900243 5750414 5310135..5312141 1 NC_010002.1 PFAM: peptidase U32; KEGG: ajs:Ajs_2285 peptidase U32; peptidase U32 5312141 5750414 Daci_4811 Delftia acidovorans SPH-1 peptidase U32 YP_001565825.1 5310135 D 398578 CDS YP_001565826.1 160900244 5750415 complement(5312105..5312386) 1 NC_010002.1 KEGG: xcb:XC_1763 hypothetical protein; hypothetical protein 5312386 5750415 Daci_4812 Delftia acidovorans SPH-1 hypothetical protein YP_001565826.1 5312105 R 398578 CDS YP_001565827.1 160900245 5750416 complement(5312397..5314739) 1 NC_010002.1 TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: aav:Aave_3827 oxidoreductase alpha (molybdopterin) subunit; oxidoreductase subunit alpha 5314739 5750416 Daci_4813 Delftia acidovorans SPH-1 oxidoreductase subunit alpha YP_001565827.1 5312397 R 398578 CDS YP_001565828.1 160900246 5750417 5314868..5315326 1 NC_010002.1 PFAM: GCN5-related N-acetyltransferase; KEGG: azo:azo3709 hypothetical protein; N-acetyltransferase GCN5 5315326 5750417 Daci_4814 Delftia acidovorans SPH-1 N-acetyltransferase GCN5 YP_001565828.1 5314868 D 398578 CDS YP_001565829.1 160900247 5750418 complement(5315339..5318113) 1 NC_010002.1 PFAM: regulatory protein LuxR; KEGG: rfr:Rfer_0996 ATP-dependent transcriptional regulator, MalT-like, LuxR family; ATP-dependent transcription regulator LuxR 5318113 5750418 Daci_4815 Delftia acidovorans SPH-1 ATP-dependent transcription regulator LuxR YP_001565829.1 5315339 R 398578 CDS YP_001565830.1 160900248 5750419 5318296..5319078 1 NC_010002.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rfr:Rfer_0998 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 5319078 5750419 Daci_4816 Delftia acidovorans SPH-1 short-chain dehydrogenase/reductase SDR YP_001565830.1 5318296 D 398578 CDS YP_001565831.1 160900249 5750420 5319212..5320396 1 NC_010002.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 5320396 5750420 Daci_4817 Delftia acidovorans SPH-1 acetyl-CoA acetyltransferase YP_001565831.1 5319212 D 398578 CDS YP_001565832.1 160900250 5750421 5320466..5321290 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rfr:Rfer_1001 ABC transporter related; ABC transporter-like protein 5321290 5750421 Daci_4818 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001565832.1 5320466 D 398578 CDS YP_001565833.1 160900251 5750422 5321274..5321999 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rfr:Rfer_1002 ABC transporter related; ABC transporter-like protein 5321999 5750422 Daci_4819 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001565833.1 5321274 D 398578 CDS YP_001565834.1 160900252 5750423 5322005..5322877 1 NC_010002.1 PFAM: inner-membrane translocator; KEGG: rfr:Rfer_1003 inner-membrane translocator; inner-membrane translocator 5322877 5750423 Daci_4820 Delftia acidovorans SPH-1 inner-membrane translocator YP_001565834.1 5322005 D 398578 CDS YP_001565835.1 160900253 5750424 5322881..5324083 1 NC_010002.1 PFAM: inner-membrane translocator; KEGG: rfr:Rfer_1004 inner-membrane translocator; inner-membrane translocator 5324083 5750424 Daci_4821 Delftia acidovorans SPH-1 inner-membrane translocator YP_001565835.1 5322881 D 398578 CDS YP_001565836.1 160900254 5750425 5324113..5324970 1 NC_010002.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pla:Plav_3255 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 5324970 5750425 Daci_4822 Delftia acidovorans SPH-1 enoyl-CoA hydratase/isomerase YP_001565836.1 5324113 D 398578 CDS YP_001565837.1 160900255 5750426 5325009..5326322 1 NC_010002.1 KEGG: rfr:Rfer_1005 extracellular ligand-binding receptor; extracellular ligand-binding receptor 5326322 5750426 Daci_4823 Delftia acidovorans SPH-1 extracellular ligand-binding receptor YP_001565837.1 5325009 D 398578 CDS YP_001565838.1 160900256 5750427 5326357..5328012 1 NC_010002.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rfr:Rfer_1006 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 5328012 5750427 Daci_4824 Delftia acidovorans SPH-1 AMP-dependent synthetase/ligase YP_001565838.1 5326357 D 398578 CDS YP_001565839.1 160900257 5750428 5328025..5329107 1 NC_010002.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rme:Rmet_5435 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 5329107 5750428 Daci_4825 Delftia acidovorans SPH-1 L-carnitine dehydratase/bile acid-inducible protein F YP_001565839.1 5328025 D 398578 CDS YP_001565840.1 160900258 5750429 5329117..5330679 1 NC_010002.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rme:Rmet_5438 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 5330679 5750429 Daci_4826 Delftia acidovorans SPH-1 AMP-dependent synthetase/ligase YP_001565840.1 5329117 D 398578 CDS YP_001565841.1 160900259 5750430 5330705..5331853 1 NC_010002.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rfr:Rfer_0994 acyl-CoA dehydrogenase-like; acyl-CoA dehydrogenase domain-containing protein 5331853 5750430 Daci_4827 Delftia acidovorans SPH-1 acyl-CoA dehydrogenase domain-containing protein YP_001565841.1 5330705 D 398578 CDS YP_001565842.1 160900260 5750431 5331947..5332837 1 NC_010002.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: hne:HNE_0595 oxidoreductase, short chain dehydrogenase/reductase family protein; short-chain dehydrogenase/reductase SDR 5332837 5750431 Daci_4828 Delftia acidovorans SPH-1 short-chain dehydrogenase/reductase SDR YP_001565842.1 5331947 D 398578 CDS YP_001565843.1 160900261 5750432 5332855..5333667 1 NC_010002.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: reu:Reut_A3284 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 5333667 5750432 Daci_4829 Delftia acidovorans SPH-1 enoyl-CoA hydratase/isomerase YP_001565843.1 5332855 D 398578 CDS YP_001565844.1 160900262 5750433 5333928..5334812 1 NC_010002.1 PFAM: 3'-5' exonuclease; KEGG: rfr:Rfer_2827 3'-5' exonuclease; 3'-5' exonuclease 5334812 5750433 Daci_4830 Delftia acidovorans SPH-1 3'-5' exonuclease YP_001565844.1 5333928 D 398578 CDS YP_001565845.1 160900263 5750434 complement(5334809..5335987) 1 NC_010002.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: reh:H16_A0406 hypothetical protein with GGDEF domain; diguanylate cyclase 5335987 5750434 Daci_4831 Delftia acidovorans SPH-1 diguanylate cyclase YP_001565845.1 5334809 R 398578 CDS YP_001565846.1 160900264 5750435 5336243..5337592 1 NC_010002.1 KEGG: ajs:Ajs_2286 O-acetylhomoserine/O-acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; O-acetylhomoserine/O-acetylserine sulfhydrylase 5337592 5750435 Daci_4832 Delftia acidovorans SPH-1 O-acetylhomoserine/O-acetylserine sulfhydrylase YP_001565846.1 5336243 D 398578 CDS YP_001565847.1 160900265 5750436 complement(5337656..5338708) 1 NC_010002.1 hypothetical protein 5338708 5750436 Daci_4833 Delftia acidovorans SPH-1 hypothetical protein YP_001565847.1 5337656 R 398578 CDS YP_001565848.1 160900266 5750437 complement(5338795..5340087) 1 NC_010002.1 PFAM: protein of unknown function DUF323; KEGG: aav:Aave_3090 protein of unknown function DUF323; hypothetical protein 5340087 5750437 Daci_4834 Delftia acidovorans SPH-1 hypothetical protein YP_001565848.1 5338795 R 398578 CDS YP_001565849.1 160900267 5750438 complement(5340080..5341318) 1 NC_010002.1 KEGG: aav:Aave_3091 putative uncharacterized conserved protein; hypothetical protein 5341318 5750438 Daci_4835 Delftia acidovorans SPH-1 hypothetical protein YP_001565849.1 5340080 R 398578 CDS YP_001565850.1 160900268 5750439 complement(5341527..5342141) 1 NC_010002.1 PFAM: OmpW family protein; OmpF family protein; KEGG: ajs:Ajs_2289 OmpW family protein; OmpW family protein 5342141 5750439 Daci_4836 Delftia acidovorans SPH-1 OmpW family protein YP_001565850.1 5341527 R 398578 CDS YP_001565851.1 160900269 5750440 5342666..5343286 1 NC_010002.1 PFAM: Glutathione S-transferase domain; KEGG: aav:Aave_0259 glutathione S-transferase, N-terminal domain; glutathione S-transferase domain-containing protein 5343286 5750440 Daci_4837 Delftia acidovorans SPH-1 glutathione S-transferase domain-containing protein YP_001565851.1 5342666 D 398578 CDS YP_001565852.1 160900270 5750441 complement(5343323..5343658) 1 NC_010002.1 TIGRFAM: addiction module toxin, RelE/StbE family; KEGG: rfr:Rfer_1750 hypothetical protein; addiction module antitoxin 5343658 5750441 Daci_4838 Delftia acidovorans SPH-1 addiction module antitoxin YP_001565852.1 5343323 R 398578 CDS YP_001565853.1 160900271 5750442 complement(5343658..5343954) 1 NC_010002.1 TIGRFAM: addiction module antitoxin, RelB/DinJ family; PFAM: RelB antitoxin; addiction module antitoxin 5343954 5750442 Daci_4839 Delftia acidovorans SPH-1 addiction module antitoxin YP_001565853.1 5343658 R 398578 CDS YP_001565854.1 160900272 5750443 5344217..5344471 1 NC_010002.1 hypothetical protein 5344471 5750443 Daci_4840 Delftia acidovorans SPH-1 hypothetical protein YP_001565854.1 5344217 D 398578 CDS YP_001565855.1 160900273 5750444 complement(5344509..5345315) 1 NC_010002.1 PFAM: Tetratricopeptide TPR_2 repeat protein; hypothetical protein 5345315 5750444 Daci_4841 Delftia acidovorans SPH-1 hypothetical protein YP_001565855.1 5344509 R 398578 CDS YP_001565856.1 160900274 5750445 complement(5345348..5346190) 1 NC_010002.1 hypothetical protein 5346190 5750445 Daci_4842 Delftia acidovorans SPH-1 hypothetical protein YP_001565856.1 5345348 R 398578 CDS YP_001565857.1 160900275 5750446 complement(5346264..5347241) 1 NC_010002.1 PFAM: protein of unknown function DUF808; KEGG: ajs:Ajs_2290 protein of unknown function DUF808; hypothetical protein 5347241 5750446 Daci_4843 Delftia acidovorans SPH-1 hypothetical protein YP_001565857.1 5346264 R 398578 CDS YP_001565858.1 160900276 5750447 complement(5347370..5348602) 1 NC_010002.1 PFAM: VWA containing CoxE family protein; SMART: von Willebrand factor type A; KEGG: pna:Pnap_3742 VWA containing CoxE family protein; VWA containing CoxE family protein 5348602 5750447 Daci_4844 Delftia acidovorans SPH-1 VWA containing CoxE family protein YP_001565858.1 5347370 R 398578 CDS YP_001565859.1 160900277 5750448 complement(5348599..5351163) 1 NC_010002.1 KEGG: pna:Pnap_3740 hypothetical protein; hypothetical protein 5351163 5750448 Daci_4845 Delftia acidovorans SPH-1 hypothetical protein YP_001565859.1 5348599 R 398578 CDS YP_001565860.1 160900278 5750449 complement(5351215..5352297) 1 NC_010002.1 PFAM: ATPase associated with various cellular activities AAA_5; KEGG: pna:Pnap_3739 ATPase associated with various cellular activities, AAA_5; ATPase 5352297 5750449 Daci_4846 Delftia acidovorans SPH-1 ATPase YP_001565860.1 5351215 R 398578 CDS YP_001565861.1 160900279 5750450 complement(5352368..5354131) 1 NC_010002.1 KEGG: pna:Pnap_3738 hypothetical protein; hypothetical protein 5354131 5750450 Daci_4847 Delftia acidovorans SPH-1 hypothetical protein YP_001565861.1 5352368 R 398578 CDS YP_001565862.1 160900280 5750451 complement(5354128..5355573) 1 NC_010002.1 PFAM: zinc finger SWIM domain protein; KEGG: pna:Pnap_3737 zinc finger, SWIM domain protein; zinc finger SWIM domain-containing protein 5355573 5750451 Daci_4848 Delftia acidovorans SPH-1 zinc finger SWIM domain-containing protein YP_001565862.1 5354128 R 398578 CDS YP_001565863.1 160900281 5750452 5356050..5357369 1 NC_010002.1 PFAM: Radical SAM domain protein; KEGG: aav:Aave_4594 radical SAM domain protein; radical SAM domain-containing protein 5357369 5750452 Daci_4849 Delftia acidovorans SPH-1 radical SAM domain-containing protein YP_001565863.1 5356050 D 398578 CDS YP_001565864.1 160900282 5750453 5357385..5358224 1 NC_010002.1 KEGG: aav:Aave_4595 uracil-DNA glycosylase superfamily; uracil-DNA glycosylase superfamily protein 5358224 5750453 Daci_4850 Delftia acidovorans SPH-1 uracil-DNA glycosylase superfamily protein YP_001565864.1 5357385 D 398578 CDS YP_001565865.1 160900283 5750454 complement(5358303..5362331) 1 NC_010002.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase 5362331 5750454 Daci_4851 Delftia acidovorans SPH-1 phosphoribosylformylglycinamidine synthase YP_001565865.1 5358303 R 398578 CDS YP_001565866.1 160900284 5750455 5362515..5363330 1 NC_010002.1 KEGG: ajs:Ajs_2293 methionine aminopeptidase, type I; TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; methionine aminopeptidase 5363330 5750455 Daci_4852 Delftia acidovorans SPH-1 methionine aminopeptidase YP_001565866.1 5362515 D 398578 CDS YP_001565867.1 160900285 5750456 5363366..5366053 1 NC_010002.1 catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase 5366053 5750456 Daci_4853 Delftia acidovorans SPH-1 PII uridylyl-transferase YP_001565867.1 5363366 D 398578 CDS YP_001565868.1 160900286 5750457 complement(5366136..5367629) 1 NC_010002.1 TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: pfo:Pfl_1871 xanthine/uracil permease; xanthine permease 5367629 5750457 Daci_4854 Delftia acidovorans SPH-1 xanthine permease YP_001565868.1 5366136 R 398578 CDS YP_001565869.1 160900287 5750458 complement(5367919..5368458) 1 NC_010002.1 KEGG: pol:Bpro_2590 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; peptide deformylase 5368458 5750458 Daci_4855 Delftia acidovorans SPH-1 peptide deformylase YP_001565869.1 5367919 R 398578 CDS YP_001565870.1 160900288 5750459 5368559..5369116 1 NC_010002.1 PFAM: protein of unknown function DUF454; KEGG: aav:Aave_3103 protein of unknown function DUF454; hypothetical protein 5369116 5750459 Daci_4856 Delftia acidovorans SPH-1 hypothetical protein YP_001565870.1 5368559 D 398578 CDS YP_001565871.1 160900289 5750463 complement(5369574..5369900) 1 NC_010002.1 KEGG: pna:Pnap_2819 hypothetical protein; hypothetical protein 5369900 5750463 Daci_4857 Delftia acidovorans SPH-1 hypothetical protein YP_001565871.1 5369574 R 398578 CDS YP_001565872.1 160900290 5750464 5370073..5370921 1 NC_010002.1 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase 5370921 aat 5750464 aat Delftia acidovorans SPH-1 leucyl/phenylalanyl-tRNA--protein transferase YP_001565872.1 5370073 D 398578 CDS YP_001565873.1 160900291 5750465 5370918..5371667 1 NC_010002.1 Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase 5371667 5750465 Daci_4859 Delftia acidovorans SPH-1 arginyl-tRNA-protein transferase YP_001565873.1 5370918 D 398578 CDS YP_001565874.1 160900292 5750466 5371796..5372620 1 NC_010002.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: ajs:Ajs_1776 regulatory proteins, IclR; IclR family transcriptional regulator 5372620 5750466 Daci_4860 Delftia acidovorans SPH-1 IclR family transcriptional regulator YP_001565874.1 5371796 D 398578 CDS YP_001565875.1 160900293 5750467 complement(5372732..5373829) 1 NC_010002.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: aav:Aave_3107 peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 5373829 5750467 Daci_4861 Delftia acidovorans SPH-1 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 YP_001565875.1 5372732 R 398578 CDS YP_001565876.1 160900294 5750468 complement(5373949..5375487) 1 NC_010002.1 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase 5375487 5750468 Daci_4862 Delftia acidovorans SPH-1 2-isopropylmalate synthase YP_001565876.1 5373949 R 398578 CDS YP_001565877.1 160900295 5750469 complement(5375587..5377278) 1 NC_010002.1 KEGG: ajs:Ajs_1773 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; 2-isopropylmalate synthase 5377278 5750469 Daci_4863 Delftia acidovorans SPH-1 2-isopropylmalate synthase YP_001565877.1 5375587 R 398578 CDS YP_001565878.1 160900296 5750470 complement(5377505..5378338) 1 NC_010002.1 KEGG: ajs:Ajs_1772 CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol--serine O-phosphatidyltransferase 5378338 5750470 Daci_4864 Delftia acidovorans SPH-1 CDP-diacylglycerol--serine O-phosphatidyltransferase YP_001565878.1 5377505 R 398578 CDS YP_001565879.1 160900297 5750471 complement(5378549..5379565) 1 NC_010002.1 KEGG: aav:Aave_3110 ketol-acid reductoisomerase; TIGRFAM: ketol-acid reductoisomerase; PFAM: acetohydroxy acid isomeroreductase; CoA-binding domain protein; Acetohydroxy acid isomeroreductase catalytic domain protein; ketol-acid reductoisomerase 5379565 5750471 Daci_4865 Delftia acidovorans SPH-1 ketol-acid reductoisomerase YP_001565879.1 5378549 R 398578 CDS YP_001565880.1 160900298 5750472 complement(5379638..5380129) 1 NC_010002.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 5380129 ilvH 5750472 ilvH Delftia acidovorans SPH-1 acetolactate synthase 3 regulatory subunit YP_001565880.1 5379638 R 398578 CDS YP_001565881.1 160900299 5750473 complement(5380284..5382065) 1 NC_010002.1 acetolactate synthase large subunit; catalyzes the formation of 2-acetolactate from pyruvate; acetolactate synthase 3 catalytic subunit 5382065 5750473 Daci_4867 Delftia acidovorans SPH-1 acetolactate synthase 3 catalytic subunit YP_001565881.1 5380284 R 398578 CDS YP_001565882.1 160900300 5750474 5382202..5382915 1 NC_010002.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: aav:Aave_3113 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 5382915 5750474 Daci_4868 Delftia acidovorans SPH-1 ECF subfamily RNA polymerase sigma-24 factor YP_001565882.1 5382202 D 398578 CDS YP_001565883.1 160900301 5750475 5382912..5383370 1 NC_010002.1 KEGG: ajs:Ajs_1767 putative transmembrane protein; putative transmembrane protein 5383370 5750475 Daci_4869 Delftia acidovorans SPH-1 putative transmembrane protein YP_001565883.1 5382912 D 398578 CDS YP_001565884.1 160900302 5750476 5383391..5384242 1 NC_010002.1 KEGG: ajs:Ajs_1766 putative transmembrane protein; putative transmembrane protein 5384242 5750476 Daci_4870 Delftia acidovorans SPH-1 putative transmembrane protein YP_001565884.1 5383391 D 398578 CDS YP_001565885.1 160900303 5750477 5384280..5384825 1 NC_010002.1 PFAM: RDD domain containing protein; KEGG: ajs:Ajs_1765 RDD domain containing protein; RDD domain-containing protein 5384825 5750477 Daci_4871 Delftia acidovorans SPH-1 RDD domain-containing protein YP_001565885.1 5384280 D 398578 CDS YP_001565886.1 160900304 5750478 5384866..5385279 1 NC_010002.1 PFAM: diacylglycerol kinase; KEGG: pol:Bpro_2312 diacylglycerol kinase; diacylglycerol kinase 5385279 5750478 Daci_4872 Delftia acidovorans SPH-1 diacylglycerol kinase YP_001565886.1 5384866 D 398578 CDS YP_001565887.1 160900305 5750479 5385276..5385869 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_1763 conserved hypothetical protein 730; hypothetical protein 5385869 5750479 Daci_4873 Delftia acidovorans SPH-1 hypothetical protein YP_001565887.1 5385276 D 398578 CDS YP_001565888.1 160900306 5750480 complement(5385971..5386309) 1 NC_010002.1 PFAM: nitrogen regulatory protein P-II; KEGG: ajs:Ajs_1762 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 5386309 5750480 Daci_4874 Delftia acidovorans SPH-1 nitrogen regulatory protein P-II YP_001565888.1 5385971 R 398578 CDS YP_001565889.1 160900307 5750481 complement(5386500..5388179) 1 NC_010002.1 KEGG: aav:Aave_3120 NAD+ synthetase; TIGRFAM: NAD+ synthetase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; NAD synthase; NAD+ synthetase 5388179 5750481 Daci_4875 Delftia acidovorans SPH-1 NAD+ synthetase YP_001565889.1 5386500 R 398578 CDS YP_001565890.1 160900308 5750482 5388236..5389459 1 NC_010002.1 PFAM: protein of unknown function DUF482; KEGG: vei:Veis_1736 protein of unknown function DUF482; hypothetical protein 5389459 5750482 Daci_4876 Delftia acidovorans SPH-1 hypothetical protein YP_001565890.1 5388236 D 398578 CDS YP_001565891.1 160900309 5750483 complement(5389463..5391307) 1 NC_010002.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: ajs:Ajs_0364 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 5391307 5750483 Daci_4877 Delftia acidovorans SPH-1 methyl-accepting chemotaxis sensory transducer YP_001565891.1 5389463 R 398578 CDS YP_001565892.1 160900310 5750484 complement(5391799..5393568) 1 NC_010002.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mpt:Mpe_A0750 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 5393568 5750484 Daci_4878 Delftia acidovorans SPH-1 methyl-accepting chemotaxis sensory transducer YP_001565892.1 5391799 R 398578 CDS YP_001565893.1 160900311 5750485 complement(5393750..5394277) 1 NC_010002.1 PFAM: Inorganic pyrophosphatase; KEGG: vei:Veis_3002 inorganic diphosphatase; inorganic diphosphatase 5394277 5750485 Daci_4879 Delftia acidovorans SPH-1 inorganic diphosphatase YP_001565893.1 5393750 R 398578 CDS YP_001565894.1 160900312 5750486 complement(5394431..5394973) 1 NC_010002.1 PFAM: protein of unknown function DUF962; KEGG: aav:Aave_2666 protein of unknown function DUF962; hypothetical protein 5394973 5750486 Daci_4880 Delftia acidovorans SPH-1 hypothetical protein YP_001565894.1 5394431 R 398578 CDS YP_001565895.1 160900313 5750487 5395036..5395872 1 NC_010002.1 PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: aav:Aave_2665 transcriptional regulator, Crp/Fnr family; Crp/FNR family transcriptional regulator 5395872 5750487 Daci_4881 Delftia acidovorans SPH-1 Crp/FNR family transcriptional regulator YP_001565895.1 5395036 D 398578 CDS YP_001565896.1 160900314 5750488 5395977..5397410 1 NC_010002.1 PFAM: Aldehyde Dehydrogenase_; KEGG: ajs:Ajs_1756 aldehyde dehydrogenase (NAD(+)); aldehyde dehydrogenase 5397410 5750488 Daci_4882 Delftia acidovorans SPH-1 aldehyde dehydrogenase YP_001565896.1 5395977 D 398578 CDS YP_001565897.1 160900315 5750489 5397420..5398094 1 NC_010002.1 KEGG: ajs:Ajs_1755 hypothetical protein; hypothetical protein 5398094 5750489 Daci_4883 Delftia acidovorans SPH-1 hypothetical protein YP_001565897.1 5397420 D 398578 CDS YP_001565898.1 160900316 5750490 5398119..5398904 1 NC_010002.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 5398904 fabG 5750490 fabG Delftia acidovorans SPH-1 3-ketoacyl-ACP reductase YP_001565898.1 5398119 D 398578 CDS YP_001565899.1 160900317 5750491 5398970..5400106 1 NC_010002.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 5400106 moaA 5750491 moaA Delftia acidovorans SPH-1 molybdenum cofactor biosynthesis protein A YP_001565899.1 5398970 D 398578 CDS YP_001565900.1 160900318 5750492 5400194..5400889 1 NC_010002.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: ajs:Ajs_1748 molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin-guanine dinucleotide biosynthesis protein A 5400889 5750492 Daci_4886 Delftia acidovorans SPH-1 molybdopterin-guanine dinucleotide biosynthesis protein A YP_001565900.1 5400194 D 398578 CDS YP_001565901.1 160900319 5750493 5400942..5402288 1 NC_010002.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: ajs:Ajs_1747 molybdenum cofactor synthesis domain; molybdenum cofactor synthesis domain-containing protein 5402288 5750493 Daci_4887 Delftia acidovorans SPH-1 molybdenum cofactor synthesis domain-containing protein YP_001565901.1 5400942 D 398578 CDS YP_001565902.1 160900320 5750494 5402301..5402633 1 NC_010002.1 PFAM: Thioredoxin domain; KEGG: ajs:Ajs_1746 thioredoxin domain; thioredoxin domain-containing protein 5402633 5750494 Daci_4888 Delftia acidovorans SPH-1 thioredoxin domain-containing protein YP_001565902.1 5402301 D 398578 CDS YP_001565903.1 160900321 5750495 5402671..5403411 1 NC_010002.1 PFAM: regulatory protein TetR; KEGG: bxe:Bxe_C1026 transcriptional regulator, TetR family; TetR family transcriptional regulator 5403411 5750495 Daci_4889 Delftia acidovorans SPH-1 TetR family transcriptional regulator YP_001565903.1 5402671 D 398578 CDS YP_001565904.1 160900322 5750496 complement(5403465..5404457) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: pol:Bpro_3683 twin-arginine translocation pathway signal; hypothetical protein 5404457 5750496 Daci_4890 Delftia acidovorans SPH-1 hypothetical protein YP_001565904.1 5403465 R 398578 CDS YP_001565905.1 160900323 5750497 complement(5404496..5405317) 1 NC_010002.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: vha:VIBHAR_02787 hypothetical protein; taurine dioxygenase 5405317 5750497 Daci_4891 Delftia acidovorans SPH-1 taurine dioxygenase YP_001565905.1 5404496 R 398578 CDS YP_001565906.1 160900324 5750498 complement(5405358..5407607) 1 NC_010002.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bam:Bamb_1075 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit 5407607 5750498 Daci_4892 Delftia acidovorans SPH-1 aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit YP_001565906.1 5405358 R 398578 CDS YP_001565907.1 160900325 5750499 complement(5407585..5408031) 1 NC_010002.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bam:Bamb_1074 (2Fe-2S)-binding domain protein; 2Fe-2S iron-sulfur cluster-binding domain-containing protein 5408031 5750499 Daci_4893 Delftia acidovorans SPH-1 2Fe-2S iron-sulfur cluster-binding domain-containing protein YP_001565907.1 5407585 R 398578 CDS YP_001565908.1 160900326 5750500 complement(5408083..5409168) 1 NC_010002.1 PFAM: porin Gram-negative type; KEGG: bur:Bcep18194_B0482 outer membrane protein (porin); porin 5409168 5750500 Daci_4894 Delftia acidovorans SPH-1 porin YP_001565908.1 5408083 R 398578 CDS YP_001565909.1 160900327 5750501 complement(5409395..5409841) 1 NC_010002.1 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H 5409841 rnhA 5750501 rnhA Delftia acidovorans SPH-1 ribonuclease H YP_001565909.1 5409395 R 398578 CDS YP_001565910.1 160900328 5750502 complement(5409838..5410575) 1 NC_010002.1 PFAM: Methyltransferase type 11; KEGG: vei:Veis_0592 methyltransferase type 11; type 11 methyltransferase 5410575 5750502 Daci_4896 Delftia acidovorans SPH-1 type 11 methyltransferase YP_001565910.1 5409838 R 398578 CDS YP_001565911.1 160900329 5750503 5410667..5411440 1 NC_010002.1 KEGG: vei:Veis_0591 hydroxyacylglutathione hydrolase; TIGRFAM: hydroxyacylglutathione hydrolase; PFAM: beta-lactamase domain protein; hydroxyacylglutathione hydrolase 5411440 5750503 Daci_4897 Delftia acidovorans SPH-1 hydroxyacylglutathione hydrolase YP_001565911.1 5410667 D 398578 CDS YP_001565912.1 160900330 5750504 5411440..5412975 1 NC_010002.1 PFAM: Peptidoglycan-binding LysM; Lytic transglycosylase catalytic; MLTD_N domain protein; KEGG: ajs:Ajs_1742 lytic transglycosylase, catalytic; lytic transglycosylase catalytic subunit 5412975 5750504 Daci_4898 Delftia acidovorans SPH-1 lytic transglycosylase catalytic subunit YP_001565912.1 5411440 D 398578 CDS YP_001565913.1 160900331 5750505 complement(5413052..5414137) 1 NC_010002.1 KEGG: rfr:Rfer_1460 twin-arginine translocation pathway signal; twin-arginine translocation pathway signal protein 5414137 5750505 Daci_4899 Delftia acidovorans SPH-1 twin-arginine translocation pathway signal protein YP_001565913.1 5413052 R 398578 CDS YP_001565914.1 160900332 5750506 complement(5414233..5414664) 1 NC_010002.1 KEGG: ajs:Ajs_2347 membrane protein-like protein; membrane protein 5414664 5750506 Daci_4900 Delftia acidovorans SPH-1 membrane protein YP_001565914.1 5414233 R 398578 CDS YP_001565915.1 160900333 5750507 complement(5414710..5415300) 1 NC_010002.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 5415300 recR 5750507 recR Delftia acidovorans SPH-1 recombination protein RecR YP_001565915.1 5414710 R 398578 CDS YP_001565916.1 160900334 5750508 complement(5415446..5415778) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_2349 conserved hypothetical protein 103; hypothetical protein 5415778 5750508 Daci_4902 Delftia acidovorans SPH-1 hypothetical protein YP_001565916.1 5415446 R 398578 CDS YP_001565917.1 160900335 5750509 complement(5415826..5418021) 1 NC_010002.1 KEGG: ajs:Ajs_2350 DNA polymerase III, subunits gamma and tau; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; DNA polymerase III subunits gamma and tau 5418021 5750509 Daci_4903 Delftia acidovorans SPH-1 DNA polymerase III subunits gamma and tau YP_001565917.1 5415826 R 398578 CDS YP_001565918.1 160900336 5750511 complement(5418284..5419660) 1 NC_010002.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ajs:Ajs_2353 HI0933 family protein; hypothetical protein 5419660 5750511 Daci_4904 Delftia acidovorans SPH-1 hypothetical protein YP_001565918.1 5418284 R 398578 CDS YP_001565919.1 160900337 5750512 5419932..5420264 1 NC_010002.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: aav:Aave_2639 thioredoxin; thioredoxin 5420264 5750512 Daci_4905 Delftia acidovorans SPH-1 thioredoxin YP_001565919.1 5419932 D 398578 CDS YP_001565920.1 160900338 5750513 5420531..5421793 1 NC_010002.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 5421793 rho 5750513 rho Delftia acidovorans SPH-1 transcription termination factor Rho YP_001565920.1 5420531 D 398578 CDS YP_001565921.1 160900339 5750514 complement(5421867..5423276) 1 NC_010002.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bpd:BURPS668_A1776 coa transferase, CaiB/BaiF family; L-carnitine dehydratase/bile acid-inducible protein F 5423276 5750514 Daci_4907 Delftia acidovorans SPH-1 L-carnitine dehydratase/bile acid-inducible protein F YP_001565921.1 5421867 R 398578 CDS YP_001565922.1 160900340 5750515 5423378..5424571 1 NC_010002.1 PFAM: regulatory protein MerR; Citrate synthase; KEGG: bur:Bcep18194_B1148 citrate synthase; citrate synthase 5424571 5750515 Daci_4908 Delftia acidovorans SPH-1 citrate synthase YP_001565922.1 5423378 D 398578 CDS YP_001565923.1 160900341 5750516 5424686..5424931 1 NC_010002.1 PFAM: ribosomal protein L31; KEGG: ajs:Ajs_2363 ribosomal protein L31; 50S ribosomal protein L31 5424931 5750516 Daci_4909 Delftia acidovorans SPH-1 50S ribosomal protein L31 YP_001565923.1 5424686 D 398578 CDS YP_001565924.1 160900342 5750517 5425087..5426826 1 NC_010002.1 KEGG: aav:Aave_2634 putative inner membrane transmembrane protein; putative inner membrane transmembrane protein 5426826 5750517 Daci_4910 Delftia acidovorans SPH-1 putative inner membrane transmembrane protein YP_001565924.1 5425087 D 398578 CDS YP_001565925.1 160900343 5750518 5426823..5428190 1 NC_010002.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: aav:Aave_2633 MATE efflux family protein; MATE efflux family protein 5428190 5750518 Daci_4911 Delftia acidovorans SPH-1 MATE efflux family protein YP_001565925.1 5426823 D 398578 CDS YP_001565926.1 160900344 5750519 complement(5428221..5429615) 1 NC_010002.1 KEGG: aav:Aave_2632 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: phosphate regulon sensor kinase PhoR; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 5429615 5750519 Daci_4912 Delftia acidovorans SPH-1 PAS/PAC sensor signal transduction histidine kinase YP_001565926.1 5428221 R 398578 CDS YP_001565927.1 160900345 5750520 complement(5429734..5430429) 1 NC_010002.1 TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ajs:Ajs_2367 two component transcriptional regulator, winged helix family; two component transcriptional regulator 5430429 5750520 Daci_4913 Delftia acidovorans SPH-1 two component transcriptional regulator YP_001565927.1 5429734 R 398578 CDS YP_001565928.1 160900346 5750521 complement(5430450..5431151) 1 NC_010002.1 TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: aav:Aave_2630 phosphate uptake regulator, PhoU; phosphate uptake regulator PhoU 5431151 5750521 Daci_4914 Delftia acidovorans SPH-1 phosphate uptake regulator PhoU YP_001565928.1 5430450 R 398578 CDS YP_001565929.1 160900347 5750522 complement(5431165..5431947) 1 NC_010002.1 KEGG: ajs:Ajs_2369 phosphate ABC transporter, ATPase subunit; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; phosphate ABC transporter ATPase 5431947 5750522 Daci_4915 Delftia acidovorans SPH-1 phosphate ABC transporter ATPase YP_001565929.1 5431165 R 398578 CDS YP_001565930.1 160900348 5750523 complement(5431986..5432870) 1 NC_010002.1 Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; phosphate transporter permease subunit PtsA 5432870 pstA 5750523 pstA Delftia acidovorans SPH-1 phosphate transporter permease subunit PtsA YP_001565930.1 5431986 R 398578 CDS YP_001565931.1 160900349 5750524 complement(5432867..5433805) 1 NC_010002.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_2627 phosphate ABC transporter, inner membrane subunit PstC; phosphate ABC transporter permease 5433805 5750524 Daci_4917 Delftia acidovorans SPH-1 phosphate ABC transporter permease YP_001565931.1 5432867 R 398578 CDS YP_001565932.1 160900350 5750525 complement(5433977..5435017) 1 NC_010002.1 TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: ajs:Ajs_2372 phosphate ABC transporter, periplasmic phosphate-binding protein; phosphate ABC transporter substrate-binding protein 5435017 5750525 Daci_4918 Delftia acidovorans SPH-1 phosphate ABC transporter substrate-binding protein YP_001565932.1 5433977 R 398578 CDS YP_001565933.1 160900351 5750526 5435263..5436747 1 NC_010002.1 PFAM: Ppx/GppA phosphatase; KEGG: aav:Aave_2625 Ppx/GppA phosphatase; Ppx/GppA phosphatase 5436747 5750526 Daci_4919 Delftia acidovorans SPH-1 Ppx/GppA phosphatase YP_001565933.1 5435263 D 398578 CDS YP_001565934.1 160900352 5750527 complement(5436818..5439268) 1 NC_010002.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 5439268 5750527 Daci_4920 Delftia acidovorans SPH-1 polyphosphate kinase YP_001565934.1 5436818 R 398578 CDS YP_001565935.1 160900353 5750528 5439481..5440461 1 NC_010002.1 PFAM: Ppx/GppA phosphatase; KEGG: pna:Pnap_2209 Ppx/GppA phosphatase; Ppx/GppA phosphatase 5440461 5750528 Daci_4921 Delftia acidovorans SPH-1 Ppx/GppA phosphatase YP_001565935.1 5439481 D 398578 CDS YP_001565936.1 160900354 5750529 5440581..5442434 1 NC_010002.1 KEGG: aav:Aave_2620 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 5442434 5750529 Daci_4922 Delftia acidovorans SPH-1 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_001565936.1 5440581 D 398578 CDS YP_001565937.1 160900355 5750530 complement(5442543..5443886) 1 NC_010002.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 5443886 glmM 5750530 glmM Delftia acidovorans SPH-1 phosphoglucosamine mutase YP_001565937.1 5442543 R 398578 CDS YP_001565938.1 160900356 5750531 complement(5443903..5444739) 1 NC_010002.1 KEGG: ajs:Ajs_2382 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; dihydropteroate synthase 5444739 5750531 Daci_4924 Delftia acidovorans SPH-1 dihydropteroate synthase YP_001565938.1 5443903 R 398578 CDS YP_001565939.1 160900357 5750532 complement(5444882..5446804) 1 NC_010002.1 KEGG: ajs:Ajs_2383 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH 5446804 5750532 Daci_4925 Delftia acidovorans SPH-1 ATP-dependent metalloprotease FtsH YP_001565939.1 5444882 R 398578 CDS YP_001565940.1 160900358 5750533 complement(5446975..5447628) 1 NC_010002.1 PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: ajs:Ajs_2384 ribosomal RNA methyltransferase RrmJ/FtsJ; ribosomal RNA methyltransferase RrmJ/FtsJ 5447628 5750533 Daci_4926 Delftia acidovorans SPH-1 ribosomal RNA methyltransferase RrmJ/FtsJ YP_001565940.1 5446975 R 398578 CDS YP_001565941.1 160900359 5750534 5447660..5448133 1 NC_010002.1 PFAM: protein of unknown function UPF0044; KEGG: ajs:Ajs_2385 protein of unknown function UPF0044; hypothetical protein 5448133 5750534 Daci_4927 Delftia acidovorans SPH-1 hypothetical protein YP_001565941.1 5447660 D 398578 CDS YP_001565942.1 160900360 5750535 5448147..5448941 1 NC_010002.1 KEGG: vei:Veis_0214 hypothetical protein; hypothetical protein 5448941 5750535 Daci_4928 Delftia acidovorans SPH-1 hypothetical protein YP_001565942.1 5448147 D 398578 CDS YP_001565943.1 160900361 5750536 complement(5449019..5449462) 1 NC_010002.1 KEGG: ajs:Ajs_2388 hypothetical protein; hypothetical protein 5449462 5750536 Daci_4929 Delftia acidovorans SPH-1 hypothetical protein YP_001565943.1 5449019 R 398578 CDS YP_001565944.1 160900362 5750537 complement(5449507..5449983) 1 NC_010002.1 TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: ajs:Ajs_2389 transcription elongation factor GreA; transcription elongation factor GreA 5449983 5750537 Daci_4930 Delftia acidovorans SPH-1 transcription elongation factor GreA YP_001565944.1 5449507 R 398578 CDS YP_001565945.1 160900363 5750538 complement(5450238..5453396) 1 NC_010002.1 TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; protein of unknown function DUF201; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; KEGG: ajs:Ajs_2390 carbamoyl-phosphate synthase, large subunit; carbamoyl-phosphate synthase large subunit 5453396 5750538 Daci_4931 Delftia acidovorans SPH-1 carbamoyl-phosphate synthase large subunit YP_001565945.1 5450238 R 398578 CDS YP_001565946.1 160900364 5750539 complement(5453479..5454645) 1 NC_010002.1 TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl-phosphate synthase small chain; KEGG: aav:Aave_2610 carbamoyl-phosphate synthase, small subunit; carbamoyl-phosphate synthase small subunit 5454645 5750539 Daci_4932 Delftia acidovorans SPH-1 carbamoyl-phosphate synthase small subunit YP_001565946.1 5453479 R 398578 CDS YP_001565947.1 160900365 5750540 complement(5454826..5455617) 1 NC_010002.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: aav:Aave_1838 tRNA/rRNA methyltransferase (SpoU); tRNA/rRNA methyltransferase SpoU 5455617 5750540 Daci_4933 Delftia acidovorans SPH-1 tRNA/rRNA methyltransferase SpoU YP_001565947.1 5454826 R 398578 CDS YP_001565948.1 160900366 5750541 complement(5455680..5456387) 1 NC_010002.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 5456387 rnhB 5750541 rnhB Delftia acidovorans SPH-1 ribonuclease HII YP_001565948.1 5455680 R 398578 CDS YP_001565949.1 160900367 5750542 complement(5456350..5457540) 1 NC_010002.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase 5457540 lpxB 5750542 lpxB Delftia acidovorans SPH-1 lipid-A-disaccharide synthase YP_001565949.1 5456350 R 398578 CDS YP_001565950.1 160900368 5750543 complement(5457562..5458359) 1 NC_010002.1 TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; KEGG: ajs:Ajs_2573 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase; acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase 5458359 5750543 Daci_4936 Delftia acidovorans SPH-1 acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase YP_001565950.1 5457562 R 398578 CDS YP_001565951.1 160900369 5750544 complement(5458367..5458807) 1 NC_010002.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 5458807 fabZ 5750544 fabZ Delftia acidovorans SPH-1 (3R)-hydroxymyristoyl-ACP dehydratase YP_001565951.1 5458367 R 398578 CDS YP_001565952.1 160900370 5750545 complement(5458804..5459811) 1 NC_010002.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 5459811 lpxD 5750545 lpxD Delftia acidovorans SPH-1 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_001565952.1 5458804 R 398578 CDS YP_001565953.1 160900371 5750546 complement(5459835..5460344) 1 NC_010002.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: aav:Aave_1832 outer membrane chaperone Skp (OmpH); outer membrane chaperone OmpH 5460344 5750546 Daci_4939 Delftia acidovorans SPH-1 outer membrane chaperone OmpH YP_001565953.1 5459835 R 398578 CDS YP_001565954.1 160900372 5750547 complement(5460344..5462641) 1 NC_010002.1 TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: ajs:Ajs_2577 surface antigen (D15); outer membrane protein assembly complex protein YaeT 5462641 5750547 Daci_4940 Delftia acidovorans SPH-1 outer membrane protein assembly complex protein YaeT YP_001565954.1 5460344 R 398578 CDS YP_001565955.1 160900373 5750548 complement(5462687..5464057) 1 NC_010002.1 KEGG: ajs:Ajs_2578 putative membrane-associated zinc metalloprotease; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein; membrane-associated zinc metalloprotease 5464057 5750548 Daci_4941 Delftia acidovorans SPH-1 membrane-associated zinc metalloprotease YP_001565955.1 5462687 R 398578 CDS YP_001565956.1 160900374 5750549 complement(5464140..5465318) 1 NC_010002.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 5465318 5750549 Daci_4942 Delftia acidovorans SPH-1 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_001565956.1 5464140 R 398578 CDS YP_001565957.1 160900375 5750550 complement(5465315..5466169) 1 NC_010002.1 PFAM: phosphatidate cytidylyltransferase; KEGG: ajs:Ajs_2580 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase 5466169 5750550 Daci_4943 Delftia acidovorans SPH-1 phosphatidate cytidylyltransferase YP_001565957.1 5465315 R 398578 CDS YP_001565958.1 160900376 5750551 complement(5466183..5466929) 1 NC_010002.1 KEGG: aav:Aave_1827 undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; undecaprenyl diphosphate synthase 5466929 5750551 Daci_4944 Delftia acidovorans SPH-1 undecaprenyl diphosphate synthase YP_001565958.1 5466183 R 398578 CDS YP_001565959.1 160900377 5750552 complement(5466965..5467525) 1 NC_010002.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 5467525 frr 5750552 frr Delftia acidovorans SPH-1 ribosome recycling factor YP_001565959.1 5466965 R 398578 CDS YP_001565960.1 160900378 5750553 complement(5467569..5468291) 1 NC_010002.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 5468291 pyrH 5750553 pyrH Delftia acidovorans SPH-1 uridylate kinase YP_001565960.1 5467569 R 398578 CDS YP_001565961.1 160900379 5750554 complement(5468356..5469252) 1 NC_010002.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 5469252 tsf 5750554 tsf Delftia acidovorans SPH-1 elongation factor Ts YP_001565961.1 5468356 R 398578 CDS YP_001565962.1 160900380 5750555 complement(5469366..5470118) 1 NC_010002.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 5470118 rpsB 5750555 rpsB Delftia acidovorans SPH-1 30S ribosomal protein S2 YP_001565962.1 5469366 R 398578 CDS YP_001565963.1 160900381 5750556 5470488..5471759 1 NC_010002.1 PFAM: FAD dependent oxidoreductase; KEGG: ajs:Ajs_2587 D-amino-acid dehydrogenase; D-amino-acid dehydrogenase 5471759 5750556 Daci_4949 Delftia acidovorans SPH-1 D-amino-acid dehydrogenase YP_001565963.1 5470488 D 398578 CDS YP_001565964.1 160900382 5750557 5471803..5473380 1 NC_010002.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: aav:Aave_1821 carbohydrate kinase, YjeF related protein; carbohydrate kinase 5473380 5750557 Daci_4950 Delftia acidovorans SPH-1 carbohydrate kinase YP_001565964.1 5471803 D 398578 CDS YP_001565965.1 160900383 5750558 complement(5473387..5475984) 1 NC_010002.1 KEGG: aav:Aave_2988 ribonuclease R; TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; Ribonuclease B OB region domain; SMART: Cold shock protein; ribonuclease R 5475984 5750558 Daci_4951 Delftia acidovorans SPH-1 ribonuclease R YP_001565965.1 5473387 R 398578 CDS YP_001565966.1 160900384 5750563 complement(5476952..5479606) 1 NC_010002.1 KEGG: aav:Aave_2989 hypothetical protein; hypothetical protein 5479606 5750563 Daci_4952 Delftia acidovorans SPH-1 hypothetical protein YP_001565966.1 5476952 R 398578 CDS YP_001565967.1 160900385 5750564 complement(5479734..5483579) 1 NC_010002.1 PFAM: protein of unknown function DUF748; KEGG: ajs:Ajs_1662 protein of unknown function DUF748; hypothetical protein 5483579 5750564 Daci_4953 Delftia acidovorans SPH-1 hypothetical protein YP_001565967.1 5479734 R 398578 CDS YP_001565968.1 160900386 5750565 5484320..5485231 1 NC_010002.1 PFAM: Lytic transglycosylase catalytic; KEGG: aav:Aave_2991 lytic transglycosylase, catalytic; lytic transglycosylase catalytic subunit 5485231 5750565 Daci_4954 Delftia acidovorans SPH-1 lytic transglycosylase catalytic subunit YP_001565968.1 5484320 D 398578 CDS YP_001565969.1 160900387 5750566 5485578..5486825 1 NC_010002.1 PFAM: Orn/Lys/Arg decarboxylase major region; glycine hydroxymethyltransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: aav:Aave_2992 glycine hydroxymethyltransferase; glycine hydroxymethyltransferase 5486825 5750566 Daci_4955 Delftia acidovorans SPH-1 glycine hydroxymethyltransferase YP_001565969.1 5485578 D 398578 CDS YP_001565970.1 160900388 5750567 5486848..5487303 1 NC_010002.1 PFAM: ATP-cone domain protein; KEGG: aav:Aave_2993 ATP-cone domain protein; transcriptional regulator NrdR 5487303 nrdR 5750567 nrdR Delftia acidovorans SPH-1 transcriptional regulator NrdR YP_001565970.1 5486848 D 398578 CDS YP_001565971.1 160900389 5750568 complement(5487369..5488538) 1 NC_010002.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 5488538 5750568 Daci_4957 Delftia acidovorans SPH-1 chorismate synthase YP_001565971.1 5487369 R 398578 CDS YP_001565972.1 160900390 5750569 5488666..5489163 1 NC_010002.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: psb:Psyr_2213 helix-turn-helix, AraC type; AraC family transcriptional regulator 5489163 5750569 Daci_4958 Delftia acidovorans SPH-1 AraC family transcriptional regulator YP_001565972.1 5488666 D 398578 CDS YP_001565973.1 160900391 5750570 complement(5489313..5489765) 1 NC_010002.1 PFAM: CBS domain containing protein; KEGG: ajs:Ajs_1657 putative transcriptional regulator, XRE family; hypothetical protein 5489765 5750570 Daci_4959 Delftia acidovorans SPH-1 hypothetical protein YP_001565973.1 5489313 R 398578 CDS YP_001565974.1 160900392 5750571 5489872..5491170 1 NC_010002.1 catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; O-acetylhomoserine aminocarboxypropyltransferase 5491170 5750571 Daci_4960 Delftia acidovorans SPH-1 O-acetylhomoserine aminocarboxypropyltransferase YP_001565974.1 5489872 D 398578 CDS YP_001565975.1 160900393 5750572 5491193..5492002 1 NC_010002.1 PFAM: alpha/beta hydrolase fold; KEGG: ajs:Ajs_1655 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 5492002 5750572 Daci_4961 Delftia acidovorans SPH-1 alpha/beta hydrolase fold protein YP_001565975.1 5491193 D 398578 CDS YP_001565976.1 160900394 5750573 complement(5492039..5493514) 1 NC_010002.1 PFAM: Acetamidase/Formamidase; KEGG: mpt:Mpe_A3600 hypothetical protein; acetamidase/formamidase 5493514 5750573 Daci_4962 Delftia acidovorans SPH-1 acetamidase/formamidase YP_001565976.1 5492039 R 398578 CDS YP_001565977.1 160900395 5750574 5493675..5496107 1 NC_010002.1 PFAM: helix-turn-helix- domain containing protein AraC type; Acetamidase/Formamidase; KEGG: mpt:Mpe_A3599 transcriptional regulatory protein; AraC family transcriptional regulator 5496107 5750574 Daci_4963 Delftia acidovorans SPH-1 AraC family transcriptional regulator YP_001565977.1 5493675 D 398578 CDS YP_001565978.1 160900396 5750575 complement(5496121..5496948) 1 NC_010002.1 PFAM: alpha/beta hydrolase fold; KEGG: bch:Bcen2424_3718 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 5496948 5750575 Daci_4964 Delftia acidovorans SPH-1 alpha/beta hydrolase fold protein YP_001565978.1 5496121 R 398578 CDS YP_001565979.1 160900397 5750576 5497167..5497520 1 NC_010002.1 KEGG: reh:H16_A1311 predicted membrane protein; membrane protein 5497520 5750576 Daci_4965 Delftia acidovorans SPH-1 membrane protein YP_001565979.1 5497167 D 398578 CDS YP_001565980.1 160900398 5750577 complement(5497535..5498881) 1 NC_010002.1 PFAM: ribonuclease BN; KEGG: vei:Veis_3782 putative ribonuclease BN; ribonuclease BN 5498881 5750577 Daci_4966 Delftia acidovorans SPH-1 ribonuclease BN YP_001565980.1 5497535 R 398578 CDS YP_001565981.1 160900399 5750578 5498947..5499387 1 NC_010002.1 KEGG: ajs:Ajs_1199 membrane protein-like protein; membrane protein 5499387 5750578 Daci_4967 Delftia acidovorans SPH-1 membrane protein YP_001565981.1 5498947 D 398578 CDS YP_001565982.1 160900400 5750579 5499431..5500861 1 NC_010002.1 PFAM: FAD linked oxidase domain protein; KEGG: ajs:Ajs_1198 FAD linked oxidase domain protein; FAD linked oxidase domain-containing protein 5500861 5750579 Daci_4968 Delftia acidovorans SPH-1 FAD linked oxidase domain-containing protein YP_001565982.1 5499431 D 398578 CDS YP_001565983.1 160900401 5750580 complement(5500940..5501521) 1 NC_010002.1 KEGG: aav:Aave_1451 hypothetical protein; hypothetical protein 5501521 5750580 Daci_4969 Delftia acidovorans SPH-1 hypothetical protein YP_001565983.1 5500940 R 398578 CDS YP_001565984.1 160900402 5750581 5501697..5502521 1 NC_010002.1 PFAM: thymidylate synthase; KEGG: ajs:Ajs_1197 thymidylate synthase; thymidylate synthase 5502521 5750581 Daci_4970 Delftia acidovorans SPH-1 thymidylate synthase YP_001565984.1 5501697 D 398578 CDS YP_001565985.1 160900403 5750582 5502543..5503043 1 NC_010002.1 PFAM: dihydrofolate reductase region; KEGG: ajs:Ajs_1195 dihydrofolate reductase; dihydrofolate reductase 5503043 5750582 Daci_4971 Delftia acidovorans SPH-1 dihydrofolate reductase YP_001565985.1 5502543 D 398578 CDS YP_001565986.1 160900404 5750583 5503139..5504221 1 NC_010002.1 PFAM: metallophosphoesterase; KEGG: sma:SAV2323 putative serine/threonine protein phosphatase; metallophosphoesterase 5504221 5750583 Daci_4972 Delftia acidovorans SPH-1 metallophosphoesterase YP_001565986.1 5503139 D 398578 CDS YP_001565987.1 160900405 5750584 5504556..5504867 1 NC_010002.1 KEGG: bbr:BB3900 ferric alcaligin siderophore receptor; Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid-like protein 5504867 5750584 Daci_4973 Delftia acidovorans SPH-1 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid-like protein YP_001565987.1 5504556 D 398578 CDS YP_001565988.1 160900406 5750585 5504983..5505492 1 NC_010002.1 KEGG: pfo:Pfl_3710 hypothetical protein; hypothetical protein 5505492 5750585 Daci_4974 Delftia acidovorans SPH-1 hypothetical protein YP_001565988.1 5504983 D 398578 CDS YP_001565989.1 160900407 5750586 complement(5505521..5506810) 1 NC_010002.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: vei:Veis_4743 major facilitator superfamily MFS_1; major facilitator transporter 5506810 5750586 Daci_4975 Delftia acidovorans SPH-1 major facilitator transporter YP_001565989.1 5505521 R 398578 CDS YP_001565990.1 160900408 5750587 complement(5506937..5510569) 1 NC_010002.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinase B/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: pol:Bpro_1781 5-oxoprolinase (ATP-hydrolyzing); 5-oxoprolinase 5510569 5750587 Daci_4976 Delftia acidovorans SPH-1 5-oxoprolinase YP_001565990.1 5506937 R 398578 CDS YP_001565991.1 160900409 5750588 complement(5510811..5511593) 1 NC_010002.1 PFAM: protein of unknown function DUF1445; KEGG: bur:Bcep18194_B2576 hypothetical protein; hypothetical protein 5511593 5750588 Daci_4977 Delftia acidovorans SPH-1 hypothetical protein YP_001565991.1 5510811 R 398578 CDS YP_001565992.1 160900410 5750589 5511721..5512650 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B2577 transcriptional regulator, LysR family; LysR family transcriptional regulator 5512650 5750589 Daci_4978 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001565992.1 5511721 D 398578 CDS YP_001565993.1 160900411 5750590 complement(5512647..5513603) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_5073 transcriptional regulator, LysR family; LysR family transcriptional regulator 5513603 5750590 Daci_4979 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001565993.1 5512647 R 398578 CDS YP_001565994.1 160900412 5750591 5513719..5514684 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: pol:Bpro_2834 uncharacterized protein UPF0065; hypothetical protein 5514684 5750591 Daci_4980 Delftia acidovorans SPH-1 hypothetical protein YP_001565994.1 5513719 D 398578 CDS YP_001565995.1 160900413 5750592 5514692..5515720 1 NC_010002.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase 5515720 pdxA 5750592 pdxA Delftia acidovorans SPH-1 4-hydroxythreonine-4-phosphate dehydrogenase YP_001565995.1 5514692 D 398578 CDS YP_001565996.1 160900414 5750593 5515749..5516921 1 NC_010002.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: pol:Bpro_2836 mandelate racemase/muconate lactonizing enzyme; mandelate racemase/muconate lactonizing protein 5516921 5750593 Daci_4982 Delftia acidovorans SPH-1 mandelate racemase/muconate lactonizing protein YP_001565996.1 5515749 D 398578 CDS YP_001565997.1 160900415 5750594 5516933..5517862 1 NC_010002.1 PFAM: dihydrodipicolinate synthetase; KEGG: aav:Aave_2247 dihydrodipicolinate synthetase; dihydrodipicolinate synthetase 5517862 5750594 Daci_4983 Delftia acidovorans SPH-1 dihydrodipicolinate synthetase YP_001565997.1 5516933 D 398578 CDS YP_001565998.1 160900416 5750595 5517989..5518366 1 NC_010002.1 KEGG: sus:Acid_0146 hypothetical protein; hypothetical protein 5518366 5750595 Daci_4984 Delftia acidovorans SPH-1 hypothetical protein YP_001565998.1 5517989 D 398578 CDS YP_001565999.1 160900417 5750596 5518356..5518880 1 NC_010002.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pen:PSEEN0743 acetyltransferase, GNAT family; N-acetyltransferase GCN5 5518880 5750596 Daci_4985 Delftia acidovorans SPH-1 N-acetyltransferase GCN5 YP_001565999.1 5518356 D 398578 CDS YP_001566000.1 160900418 5750597 complement(5518867..5519196) 1 NC_010002.1 hypothetical protein 5519196 5750597 Daci_4986 Delftia acidovorans SPH-1 hypothetical protein YP_001566000.1 5518867 R 398578 CDS YP_001566001.1 160900419 5750598 5519381..5519854 1 NC_010002.1 PFAM: Tail Collar domain protein; KEGG: fjo:Fjoh_2683 phage tail collar domain protein; tail collar domain-containing protein 5519854 5750598 Daci_4987 Delftia acidovorans SPH-1 tail collar domain-containing protein YP_001566001.1 5519381 D 398578 CDS YP_001566002.1 160900420 5750599 5519854..5520345 1 NC_010002.1 PFAM: Tail Collar domain protein; KEGG: sus:Acid_0150 phage tail collar domain protein; tail collar domain-containing protein 5520345 5750599 Daci_4988 Delftia acidovorans SPH-1 tail collar domain-containing protein YP_001566002.1 5519854 D 398578 CDS YP_001566003.1 160900421 5750600 5520351..5520872 1 NC_010002.1 PFAM: Tail Collar domain protein; KEGG: mlo:mll4441 microcystin dependent protein MdpB; tail collar domain-containing protein 5520872 5750600 Daci_4989 Delftia acidovorans SPH-1 tail collar domain-containing protein YP_001566003.1 5520351 D 398578 CDS YP_001566004.1 160900422 5750601 5520881..5525479 1 NC_010002.1 PFAM: Ig domain protein group 1 domain protein; KEGG: sus:Acid_0554 beta-propeller repeat protein; Ig domain-containing protein 5525479 5750601 Daci_4990 Delftia acidovorans SPH-1 Ig domain-containing protein YP_001566004.1 5520881 D 398578 CDS YP_001566005.1 160900423 5750602 complement(5525528..5526820) 1 NC_010002.1 KEGG: reh:H16_B0479 hypothetical protein; hypothetical protein 5526820 5750602 Daci_4991 Delftia acidovorans SPH-1 hypothetical protein YP_001566005.1 5525528 R 398578 CDS YP_001566006.1 160900424 5750603 complement(5526817..5527818) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: reh:H16_B0480 probable extra-cytoplasmic solute receptor; hypothetical protein 5527818 5750603 Daci_4992 Delftia acidovorans SPH-1 hypothetical protein YP_001566006.1 5526817 R 398578 CDS YP_001566007.1 160900425 5750604 5527970..5528881 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_B0481 transcriptional regulator, LysR-family; LysR family transcriptional regulator 5528881 5750604 Daci_4993 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001566007.1 5527970 D 398578 CDS YP_001566008.1 160900426 5750605 5528909..5529652 1 NC_010002.1 PFAM: cyclic nucleotide-binding; KEGG: aav:Aave_3075 transcriptional regulator, Crp/Fnr family; cyclic nucleotide-binding protein 5529652 5750605 Daci_4994 Delftia acidovorans SPH-1 cyclic nucleotide-binding protein YP_001566008.1 5528909 D 398578 CDS YP_001566009.1 160900427 5750606 complement(5529721..5530992) 1 NC_010002.1 Catalyzes the deamination of cytosine to uracil and ammonia; cytosine deaminase 5530992 5750606 Daci_4995 Delftia acidovorans SPH-1 cytosine deaminase YP_001566009.1 5529721 R 398578 CDS YP_001566010.1 160900428 5750607 complement(5531093..5531779) 1 NC_010002.1 PFAM: Fimbrial protein; KEGG: pap:PSPA7_4404 adhesin 20K; fimbrial protein 5531779 5750607 Daci_4996 Delftia acidovorans SPH-1 fimbrial protein YP_001566010.1 5531093 R 398578 CDS YP_001566011.1 160900429 5750608 5532481..5533257 1 NC_010002.1 TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: ajs:Ajs_1194 exodeoxyribonuclease III Xth; exodeoxyribonuclease III 5533257 5750608 Daci_4997 Delftia acidovorans SPH-1 exodeoxyribonuclease III YP_001566011.1 5532481 D 398578 CDS YP_001566012.1 160900430 5750609 complement(5533273..5534127) 1 NC_010002.1 KEGG: ajs:Ajs_1193 hypothetical protein; hypothetical protein 5534127 5750609 Daci_4998 Delftia acidovorans SPH-1 hypothetical protein YP_001566012.1 5533273 R 398578 CDS YP_001566013.1 160900431 5750610 complement(5534229..5535800) 1 NC_010002.1 KEGG: aav:Aave_1445 nitrogen metabolism transcriptional regulator, NtrC, fis family; TIGRFAM: nitrogen regulation protein NR(I); PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; nitrogen metabolism transcriptional regulator NtrC 5535800 5750610 Daci_4999 Delftia acidovorans SPH-1 nitrogen metabolism transcriptional regulator NtrC YP_001566013.1 5534229 R 398578 CDS YP_001566014.1 160900432 5750611 complement(5535846..5536922) 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ajs:Ajs_1191 signal transduction histidine kinase, nitrogen specific, NtrB; signal transduction histidine kinase NtrB 5536922 5750611 Daci_5000 Delftia acidovorans SPH-1 signal transduction histidine kinase NtrB YP_001566014.1 5535846 R 398578 CDS YP_001566015.1 160900433 5750612 complement(5536953..5537456) 1 NC_010002.1 KEGG: ajs:Ajs_1190 conserved hypothetical signal peptide protein; putative signal peptide protein 5537456 5750612 Daci_5001 Delftia acidovorans SPH-1 putative signal peptide protein YP_001566015.1 5536953 R 398578 CDS YP_001566016.1 160900434 5750613 complement(5537637..5539052) 1 NC_010002.1 TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: aav:Aave_1442 glutamine synthetase, type I; type I glutamine synthetase 5539052 5750613 Daci_5002 Delftia acidovorans SPH-1 type I glutamine synthetase YP_001566016.1 5537637 R 398578 CDS YP_001566017.1 160900435 5750614 complement(5539289..5540107) 1 NC_010002.1 PFAM: molybdopterin binding domain; KEGG: aav:Aave_1441 molybdopterin binding domain; molybdopterin-binding domain-containing protein 5540107 5750614 Daci_5003 Delftia acidovorans SPH-1 molybdopterin-binding domain-containing protein YP_001566017.1 5539289 R 398578 CDS YP_001566018.1 160900436 5750615 complement(5540104..5540991) 1 NC_010002.1 KEGG: ajs:Ajs_1187 putative transmembrane protein; putative transmembrane protein 5540991 5750615 Daci_5004 Delftia acidovorans SPH-1 putative transmembrane protein YP_001566018.1 5540104 R 398578 CDS YP_001566019.1 160900437 5750616 complement(5541019..5541999) 1 NC_010002.1 PFAM: fatty acid hydroxylase; KEGG: aav:Aave_1439 hypothetical protein; fatty acid hydroxylase 5541999 5750616 Daci_5005 Delftia acidovorans SPH-1 fatty acid hydroxylase YP_001566019.1 5541019 R 398578 CDS YP_001566020.1 160900438 5750617 complement(5542039..5542857) 1 NC_010002.1 PFAM: polysaccharide deacetylase; KEGG: aav:Aave_1438 polysaccharide deacetylase; polysaccharide deacetylase 5542857 5750617 Daci_5006 Delftia acidovorans SPH-1 polysaccharide deacetylase YP_001566020.1 5542039 R 398578 CDS YP_001566021.1 160900439 5750618 complement(5542857..5544089) 1 NC_010002.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: ajs:Ajs_1184 hypothetical protein; hypothetical protein 5544089 5750618 Daci_5007 Delftia acidovorans SPH-1 hypothetical protein YP_001566021.1 5542857 R 398578 CDS YP_001566022.1 160900440 5750619 complement(5544272..5544796) 1 NC_010002.1 PFAM: phosphoribosyltransferase; KEGG: aav:Aave_1435 phosphoribosyltransferase; phosphoribosyltransferase 5544796 5750619 Daci_5008 Delftia acidovorans SPH-1 phosphoribosyltransferase YP_001566022.1 5544272 R 398578 CDS YP_001566023.1 160900441 5750620 complement(5544840..5546216) 1 NC_010002.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 5546216 5750620 Daci_5009 Delftia acidovorans SPH-1 adenylosuccinate synthetase YP_001566023.1 5544840 R 398578 CDS YP_001566024.1 160900442 5750621 complement(5546256..5547404) 1 NC_010002.1 PFAM: tRNA synthetase class II (G H P and S); KEGG: ajs:Ajs_1180 tRNA synthetase, class II (G, H, P and S); tRNA synthetase class II (G H P and S) 5547404 5750621 Daci_5010 Delftia acidovorans SPH-1 tRNA synthetase class II (G H P and S) YP_001566024.1 5546256 R 398578 CDS YP_001566025.1 160900443 5750622 complement(5547605..5548495) 1 NC_010002.1 TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: ajs:Ajs_1178 HflC protein; HflC protein 5548495 5750622 Daci_5011 Delftia acidovorans SPH-1 HflC protein YP_001566025.1 5547605 R 398578 CDS YP_001566026.1 160900444 5750623 complement(5548508..5549902) 1 NC_010002.1 TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: ajs:Ajs_1177 HflK protein; HflK protein 5549902 5750623 Daci_5012 Delftia acidovorans SPH-1 HflK protein YP_001566026.1 5548508 R 398578 CDS YP_001566027.1 160900445 5750624 complement(5549974..5551188) 1 NC_010002.1 TIGRFAM: small GTP-binding protein; GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: aav:Aave_1430 GTP-binding protein; GTP-binding proten HflX 5551188 5750624 Daci_5013 Delftia acidovorans SPH-1 GTP-binding proten HflX YP_001566027.1 5549974 R 398578 CDS YP_001566028.1 160900446 5750625 complement(5551256..5551507) 1 NC_010002.1 TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; KEGG: aav:Aave_1429 RNA chaperone Hfq; RNA chaperone Hfq 5551507 5750625 Daci_5014 Delftia acidovorans SPH-1 RNA chaperone Hfq YP_001566028.1 5551256 R 398578 CDS YP_001566029.1 160900447 5750626 complement(5551610..5552956) 1 NC_010002.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 5552956 engA 5750626 engA Delftia acidovorans SPH-1 GTP-binding protein EngA YP_001566029.1 5551610 R 398578 CDS YP_001566030.1 160900448 5750627 complement(5552972..5554153) 1 NC_010002.1 TIGRFAM: outer membrane assembly lipoprotein YfgL; PFAM: Pyrrolo-quinoline quinone; KEGG: aav:Aave_1427 pyrrolo-quinoline quinone; outer membrane assembly lipoprotein YfgL 5554153 5750627 Daci_5016 Delftia acidovorans SPH-1 outer membrane assembly lipoprotein YfgL YP_001566030.1 5552972 R 398578 CDS YP_001566031.1 160900449 5750628 complement(5554150..5554833) 1 NC_010002.1 KEGG: aav:Aave_1426 hypothetical protein; hypothetical protein 5554833 5750628 Daci_5017 Delftia acidovorans SPH-1 hypothetical protein YP_001566031.1 5554150 R 398578 CDS YP_001566032.1 160900450 5750629 complement(5554904..5556199) 1 NC_010002.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 5556199 hisS 5750629 hisS Delftia acidovorans SPH-1 histidyl-tRNA synthetase YP_001566032.1 5554904 R 398578 CDS YP_001566033.1 160900451 5750630 complement(5556343..5557626) 1 NC_010002.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 5557626 ispG 5750630 ispG Delftia acidovorans SPH-1 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_001566033.1 5556343 R 398578 CDS YP_001566034.1 160900452 5750631 complement(5557629..5558660) 1 NC_010002.1 KEGG: pol:Bpro_2609 hypothetical protein; hypothetical protein 5558660 5750631 Daci_5020 Delftia acidovorans SPH-1 hypothetical protein YP_001566034.1 5557629 R 398578 CDS YP_001566035.1 160900453 5750632 complement(5558653..5559540) 1 NC_010002.1 KEGG: aav:Aave_1422 type IV pilus biogenesis/stability protein PilW; TIGRFAM: type IV pilus biogenesis/stability protein PilW; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; type IV pilus biogenesis/stability protein PilW 5559540 5750632 Daci_5021 Delftia acidovorans SPH-1 type IV pilus biogenesis/stability protein PilW YP_001566035.1 5558653 R 398578 CDS YP_001566036.1 160900454 5750633 complement(5559563..5560756) 1 NC_010002.1 TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: aav:Aave_1421 radical SAM enzyme, Cfr family; radical SAM protein 5560756 5750633 Daci_5022 Delftia acidovorans SPH-1 radical SAM protein YP_001566036.1 5559563 R 398578 CDS YP_001566037.1 160900455 5750634 complement(5560780..5561205) 1 NC_010002.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 5561205 ndk 5750634 ndk Delftia acidovorans SPH-1 nucleoside diphosphate kinase YP_001566037.1 5560780 R 398578 CDS YP_001566038.1 160900456 5750635 complement(5561375..5562778) 1 NC_010002.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: aav:Aave_1419 pseudouridine synthase; pseudouridine synthase 5562778 5750635 Daci_5024 Delftia acidovorans SPH-1 pseudouridine synthase YP_001566038.1 5561375 R 398578 CDS YP_001566039.1 160900457 5750636 complement(5562775..5563611) 1 NC_010002.1 TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: aav:Aave_1418 putative transcriptional regulator; segregation and condensation protein B 5563611 5750636 Daci_5025 Delftia acidovorans SPH-1 segregation and condensation protein B YP_001566039.1 5562775 R 398578 CDS YP_001566040.1 160900458 5750637 complement(5563722..5564792) 1 NC_010002.1 KEGG: ajs:Ajs_1163 pseudouridine synthase, RluA family; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; RluA family pseudouridine synthase 5564792 5750637 Daci_5026 Delftia acidovorans SPH-1 RluA family pseudouridine synthase YP_001566040.1 5563722 R 398578 CDS YP_001566041.1 160900459 5750638 complement(5564792..5565670) 1 NC_010002.1 PFAM: Peptidoglycan-binding LysM; peptidase M23B; KEGG: aav:Aave_1416 peptidase M23B; peptidase M23B 5565670 5750638 Daci_5027 Delftia acidovorans SPH-1 peptidase M23B YP_001566041.1 5564792 R 398578 CDS YP_001566042.1 160900460 5750639 complement(5565684..5566427) 1 NC_010002.1 KEGG: aav:Aave_1415 protein-L-isoaspartate O-methyltransferase; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase 5566427 5750639 Daci_5028 Delftia acidovorans SPH-1 protein-L-isoaspartate O-methyltransferase YP_001566042.1 5565684 R 398578 CDS YP_001566043.1 160900461 5750640 complement(5566469..5567338) 1 NC_010002.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 5567338 surE 5750640 surE Delftia acidovorans SPH-1 stationary phase survival protein SurE YP_001566043.1 5566469 R 398578 CDS YP_001566044.1 160900462 5750641 5567372..5568352 1 NC_010002.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: aav:Aave_1413 alcohol dehydrogenase, zinc-binding domain protein; alcohol dehydrogenase 5568352 5750641 Daci_5030 Delftia acidovorans SPH-1 alcohol dehydrogenase YP_001566044.1 5567372 D 398578 CDS YP_001566045.1 160900463 5750642 5568411..5570009 1 NC_010002.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: aav:Aave_1412 diguanylate cyclase; diguanylate cyclase 5570009 5750642 Daci_5031 Delftia acidovorans SPH-1 diguanylate cyclase YP_001566045.1 5568411 D 398578 CDS YP_001566046.1 160900464 5750643 5570070..5571704 1 NC_010002.1 KEGG: ajs:Ajs_1157 alkaline phosphatase; alkaline phosphatase 5571704 5750643 Daci_5032 Delftia acidovorans SPH-1 alkaline phosphatase YP_001566046.1 5570070 D 398578 CDS YP_001566047.1 160900465 5750644 5571842..5573071 1 NC_010002.1 PFAM: sodium/glutamate symporter; KEGG: ajs:Ajs_2284 sodium/glutamate symporter; sodium/glutamate symporter 5573071 5750644 Daci_5033 Delftia acidovorans SPH-1 sodium/glutamate symporter YP_001566047.1 5571842 D 398578 CDS YP_001566048.1 160900466 5750645 5573095..5574726 1 NC_010002.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: reh:H16_B1107 phospholipase D; phospholipase D/transphosphatidylase 5574726 5750645 Daci_5034 Delftia acidovorans SPH-1 phospholipase D/transphosphatidylase YP_001566048.1 5573095 D 398578 CDS YP_001566049.1 160900467 5750646 complement(5574743..5576065) 1 NC_010002.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bam:Bamb_4134 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 5576065 5750646 Daci_5035 Delftia acidovorans SPH-1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001566049.1 5574743 R 398578 CDS YP_001566050.1 160900468 5750647 5576463..5576738 1 NC_010002.1 KEGG: bte:BTH_I1972 hypothetical protein; hypothetical protein 5576738 5750647 Daci_5036 Delftia acidovorans SPH-1 hypothetical protein YP_001566050.1 5576463 D 398578 CDS YP_001566051.1 160900469 5750648 5576735..5577541 1 NC_010002.1 TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: aci:ACIAD1987 methionine aminopeptidase; methionine aminopeptidase 5577541 5750648 Daci_5037 Delftia acidovorans SPH-1 methionine aminopeptidase YP_001566051.1 5576735 D 398578 CDS YP_001566052.1 160900470 5750649 5577544..5577879 1 NC_010002.1 PFAM: small multidrug resistance protein; KEGG: aav:Aave_4701 small multidrug resistance protein; small multidrug resistance protein 5577879 5750649 Daci_5038 Delftia acidovorans SPH-1 small multidrug resistance protein YP_001566052.1 5577544 D 398578 CDS YP_001566053.1 160900471 5750650 complement(5577907..5579553) 1 NC_010002.1 PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_3136 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 5579553 5750650 Daci_5039 Delftia acidovorans SPH-1 AMP-dependent synthetase/ligase YP_001566053.1 5577907 R 398578 CDS YP_001566054.1 160900472 5750651 complement(5580026..5581498) 1 NC_010002.1 hypothetical protein 5581498 5750651 Daci_5040 Delftia acidovorans SPH-1 hypothetical protein YP_001566054.1 5580026 R 398578 CDS YP_001566055.1 160900473 5750652 complement(5581502..5582902) 1 NC_010002.1 PFAM: band 7 protein; KEGG: aba:Acid345_1730 membrane protease; hypothetical protein 5582902 5750652 Daci_5041 Delftia acidovorans SPH-1 hypothetical protein YP_001566055.1 5581502 R 398578 CDS YP_001566056.1 160900474 5750653 5583107..5583832 1 NC_010002.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: dps:DP0750 two-component system response regulator (Pho family); two component transcriptional regulator 5583832 5750653 Daci_5042 Delftia acidovorans SPH-1 two component transcriptional regulator YP_001566056.1 5583107 D 398578 CDS YP_001566057.1 160900475 5750654 5583829..5586051 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: psb:Psyr_1498 heavy metal sensor kinase; histidine kinase 5586051 5750654 Daci_5043 Delftia acidovorans SPH-1 histidine kinase YP_001566057.1 5583829 D 398578 CDS YP_001566058.1 160900476 5750655 5586093..5588126 1 NC_010002.1 KEGG: aav:Aave_1407 DNA primase; TIGRFAM: DNA primase; PFAM: zinc finger CHC2-family protein; TOPRIM domain protein; DNA primase catalytic core domain; SMART: Toprim sub domain protein; DNA primase 5588126 5750655 Daci_5044 Delftia acidovorans SPH-1 DNA primase YP_001566058.1 5586093 D 398578 CDS YP_001566059.1 160900477 5750656 5588390..5590816 1 NC_010002.1 TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 1.1 domain protein; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 non-essential domain protein; sigma-70 region 1.2; KEGG: ajs:Ajs_3138 RNA polymerase, sigma 70 subunit, RpoD family; RNA polymerase sigma 70 subunit RpoD 5590816 5750656 Daci_5045 Delftia acidovorans SPH-1 RNA polymerase sigma 70 subunit RpoD YP_001566059.1 5588390 D 398578 CDS YP_001566060.1 160900478 5750657 5590967..5591446 1 NC_010002.1 PFAM: adenylate cyclase; KEGG: abo:ABO_0867 hypothetical protein; adenylate cyclase 5591446 5750657 Daci_5046 Delftia acidovorans SPH-1 adenylate cyclase YP_001566060.1 5590967 D 398578 CDS YP_001566061.1 160900479 5750658 complement(5591532..5592059) 1 NC_010002.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ppf:Pput_3213 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 5592059 5750658 Daci_5047 Delftia acidovorans SPH-1 N-acetyltransferase GCN5 YP_001566061.1 5591532 R 398578 CDS YP_001566062.1 160900480 5750659 complement(5592080..5593588) 1 NC_010002.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: reh:H16_B0980 transcriptional regulator, MocR family; transcriptional regulator 5593588 5750659 Daci_5048 Delftia acidovorans SPH-1 transcriptional regulator YP_001566062.1 5592080 R 398578 CDS YP_001566063.1 160900481 5750660 5593728..5595038 1 NC_010002.1 TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III; KEGG: bbr:BB1807 4-aminobutyrate aminotransferase; 4-aminobutyrate aminotransferase 5595038 5750660 Daci_5049 Delftia acidovorans SPH-1 4-aminobutyrate aminotransferase YP_001566063.1 5593728 D 398578 CDS YP_001566064.1 160900482 5750661 5595069..5596526 1 NC_010002.1 KEGG: reh:H16_B0982 succinate-semialdehyde dehydrogenase (NADP+); TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; succinate-semialdehyde dehydrogenase 5596526 5750661 Daci_5050 Delftia acidovorans SPH-1 succinate-semialdehyde dehydrogenase YP_001566064.1 5595069 D 398578 CDS YP_001566065.1 160900483 5750662 5596632..5597609 1 NC_010002.1 TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE domain protein; KEGG: aav:Aave_1400 2-dehydropantoate 2-reductase; 2-dehydropantoate 2-reductase 5597609 5750662 Daci_5051 Delftia acidovorans SPH-1 2-dehydropantoate 2-reductase YP_001566065.1 5596632 D 398578 CDS YP_001566066.1 160900484 5750663 complement(5597597..5599777) 1 NC_010002.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: psa:PST_1001 putative outer membrane receptor; TonB-dependent receptor 5599777 5750663 Daci_5052 Delftia acidovorans SPH-1 TonB-dependent receptor YP_001566066.1 5597597 R 398578 CDS YP_001566067.1 160900485 5750664 complement(5599990..5601375) 1 NC_010002.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; flavodoxin/nitric oxide synthase; KEGG: har:HEAR3398 oxidoreductase binding flavins likely to be involved in sulfur metabolism (CysJ: sulfite reductase alpha subunit); flavodoxin/nitric oxide synthase 5601375 5750664 Daci_5053 Delftia acidovorans SPH-1 flavodoxin/nitric oxide synthase YP_001566067.1 5599990 R 398578 CDS YP_001566068.1 160900486 5750665 complement(5601421..5602509) 1 NC_010002.1 PFAM: ApbE family lipoprotein; KEGG: mpt:Mpe_A3727 thiamine biosynthesis protein; ApbE family lipoprotein 5602509 5750665 Daci_5054 Delftia acidovorans SPH-1 ApbE family lipoprotein YP_001566068.1 5601421 R 398578 CDS YP_001566069.1 160900487 5750666 complement(5602539..5603357) 1 NC_010002.1 KEGG: xcb:XC_1336 hypothetical protein; hypothetical protein 5603357 5750666 Daci_5055 Delftia acidovorans SPH-1 hypothetical protein YP_001566069.1 5602539 R 398578 CDS YP_001566070.1 160900488 5750667 complement(5603458..5603985) 1 NC_010002.1 KEGG: mpt:Mpe_A3729 hypothetical protein; hypothetical protein 5603985 5750667 Daci_5056 Delftia acidovorans SPH-1 hypothetical protein YP_001566070.1 5603458 R 398578 CDS YP_001566071.1 160900489 5750668 complement(5604006..5604644) 1 NC_010002.1 PFAM: PepSY-associated TM helix domain protein; KEGG: mpt:Mpe_A3730 hypothetical protein; PepSY-associated TM helix domain-containing protein 5604644 5750668 Daci_5057 Delftia acidovorans SPH-1 PepSY-associated TM helix domain-containing protein YP_001566071.1 5604006 R 398578 CDS YP_001566072.1 160900490 5750669 5605015..5606091 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: pna:Pnap_1237 uncharacterized protein UPF0065; hypothetical protein 5606091 5750669 Daci_5058 Delftia acidovorans SPH-1 hypothetical protein YP_001566072.1 5605015 D 398578 CDS YP_001566073.1 160900491 5750670 5606312..5606617 1 NC_010002.1 KEGG: ajs:Ajs_3145 putative transcriptional regulator; putative transcriptional regulator 5606617 5750670 Daci_5059 Delftia acidovorans SPH-1 putative transcriptional regulator YP_001566073.1 5606312 D 398578 CDS YP_001566074.1 160900492 5750671 5606727..5607080 1 NC_010002.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: ajs:Ajs_3146 peptidylprolyl isomerase; FKBP-type peptidylprolyl isomerase 5607080 5750671 Daci_5060 Delftia acidovorans SPH-1 FKBP-type peptidylprolyl isomerase YP_001566074.1 5606727 D 398578 CDS YP_001566075.1 160900493 5750672 complement(5607198..5607722) 1 NC_010002.1 KEGG: vei:Veis_2053 hypothetical protein; hypothetical protein 5607722 5750672 Daci_5061 Delftia acidovorans SPH-1 hypothetical protein YP_001566075.1 5607198 R 398578 CDS YP_001566076.1 160900494 5750673 complement(5607909..5610008) 1 NC_010002.1 PFAM: Na+/solute symporter; KEGG: ajs:Ajs_2877 Na+/solute symporter; Na+/solute symporter 5610008 5750673 Daci_5062 Delftia acidovorans SPH-1 Na+/solute symporter YP_001566076.1 5607909 R 398578 CDS YP_001566077.1 160900495 5750674 complement(5610001..5610381) 1 NC_010002.1 KEGG: aav:Aave_1383 hypothetical protein; hypothetical protein 5610381 5750674 Daci_5063 Delftia acidovorans SPH-1 hypothetical protein YP_001566077.1 5610001 R 398578 CDS YP_001566078.1 160900496 5750675 complement(5610399..5612789) 1 NC_010002.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase 5612789 5750675 Daci_5064 Delftia acidovorans SPH-1 phosphoenolpyruvate synthase YP_001566078.1 5610399 R 398578 CDS YP_001566079.1 160900497 5750676 5612999..5613820 1 NC_010002.1 PFAM: protein of unknown function DUF299; KEGG: ajs:Ajs_2880 protein of unknown function DUF299; hypothetical protein 5613820 5750676 Daci_5065 Delftia acidovorans SPH-1 hypothetical protein YP_001566079.1 5612999 D 398578 CDS YP_001566080.1 160900498 5750677 complement(5613836..5614780) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: smd:Smed_0600 transcriptional regulator, LysR family; LysR family transcriptional regulator 5614780 5750677 Daci_5066 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001566080.1 5613836 R 398578 CDS YP_001566081.1 160900499 5750678 5614793..5615203 1 NC_010002.1 KEGG: pen:PSEEN1394 hypothetical protein; hypothetical protein 5615203 5750678 Daci_5067 Delftia acidovorans SPH-1 hypothetical protein YP_001566081.1 5614793 D 398578 CDS YP_001566082.1 160900500 5750679 complement(5615252..5616376) 1 NC_010002.1 PFAM: Haemin-degrading family protein; KEGG: mfa:Mfla_1604 haemin-degrading; hemin-degrading family protein 5616376 5750679 Daci_5068 Delftia acidovorans SPH-1 hemin-degrading family protein YP_001566082.1 5615252 R 398578 CDS YP_001566083.1 160900501 5750680 complement(5616373..5616807) 1 NC_010002.1 KEGG: aav:Aave_1378 hypothetical protein; hypothetical protein 5616807 5750680 Daci_5069 Delftia acidovorans SPH-1 hypothetical protein YP_001566083.1 5616373 R 398578 CDS YP_001566084.1 160900502 5750681 complement(5616811..5619099) 1 NC_010002.1 TIGRFAM: TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; TonB-dependent heme/hemoglobin receptor family protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccr:CC_2194 TonB-dependent receptor; TonB-dependent hemoglobin/transferrin/lactoferrin family receptor 5619099 5750681 Daci_5070 Delftia acidovorans SPH-1 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor YP_001566084.1 5616811 R 398578 CDS YP_001566085.1 160900503 5750682 complement(5619502..5621058) 1 NC_010002.1 TIGRFAM: alkyl hydroperoxide reductase, F subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ajs:Ajs_2881 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; alkyl hydroperoxide reductase subunit F 5621058 5750682 Daci_5071 Delftia acidovorans SPH-1 alkyl hydroperoxide reductase subunit F YP_001566085.1 5619502 R 398578 CDS YP_001566086.1 160900504 5750683 complement(5621162..5621725) 1 NC_010002.1 with AhpF catalyzes the conversion of alkyl hydroperoxides to their corresponding alcohols; AhpC reduced the hydroperoxide substrate; alkyl hydroperoxide reductase subunit C 5621725 5750683 Daci_5072 Delftia acidovorans SPH-1 alkyl hydroperoxide reductase subunit C YP_001566086.1 5621162 R 398578 CDS YP_001566087.1 160900505 5750684 5622094..5622570 1 NC_010002.1 TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein; KEGG: pol:Bpro_3046 bacterioferritin; bacterioferritin 5622570 5750684 Daci_5073 Delftia acidovorans SPH-1 bacterioferritin YP_001566087.1 5622094 D 398578 CDS YP_001566088.1 160900506 5750685 complement(5622665..5623963) 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: noc:Noc_1167 signal transduction histidine kinase; histidine kinase 5623963 5750685 Daci_5074 Delftia acidovorans SPH-1 histidine kinase YP_001566088.1 5622665 R 398578 CDS YP_001566089.1 160900507 5750686 complement(5624062..5624850) 1 NC_010002.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bxe:Bxe_A0567 transcriptional regulator, GntR family; GntR family transcriptional regulator 5624850 5750686 Daci_5075 Delftia acidovorans SPH-1 GntR family transcriptional regulator YP_001566089.1 5624062 R 398578 CDS YP_001566090.1 160900508 5750687 complement(5624888..5626321) 1 NC_010002.1 PFAM: major facilitator superfamily MFS_1; KEGG: reu:Reut_B4536 general substrate transporter:major facilitator superfamily MFS_1; major facilitator transporter 5626321 5750687 Daci_5076 Delftia acidovorans SPH-1 major facilitator transporter YP_001566090.1 5624888 R 398578 CDS YP_001566091.1 160900509 5750688 5626448..5626981 1 NC_010002.1 PFAM: Ureidoglycolate hydrolase; KEGG: csa:Csal_0080 ureidoglycolate hydrolase; ureidoglycolate hydrolase 5626981 5750688 Daci_5077 Delftia acidovorans SPH-1 ureidoglycolate hydrolase YP_001566091.1 5626448 D 398578 CDS YP_001566092.1 160900510 5750689 complement(5627055..5628023) 1 NC_010002.1 PFAM: protein of unknown function DUF403; KEGG: aav:Aave_1354 protein of unknown function DUF403; hypothetical protein 5628023 5750689 Daci_5078 Delftia acidovorans SPH-1 hypothetical protein YP_001566092.1 5627055 R 398578 CDS YP_001566093.1 160900511 5750690 complement(5628024..5629493) 1 NC_010002.1 PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: aav:Aave_1353 protein of unknown function DUF404; hypothetical protein 5629493 5750690 Daci_5079 Delftia acidovorans SPH-1 hypothetical protein YP_001566093.1 5628024 R 398578 CDS YP_001566094.1 160900512 5750691 complement(5629637..5632135) 1 NC_010002.1 TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; PFAM: beta-lactamase domain protein; ComEC/Rec2-related protein; KEGG: vei:Veis_0403 DNA internalization-related competence protein ComEC/Rec2; DNA internalization-like competence protein ComEC/Rec2 5632135 5750691 Daci_5080 Delftia acidovorans SPH-1 DNA internalization-like competence protein ComEC/Rec2 YP_001566094.1 5629637 R 398578 CDS YP_001566095.1 160900513 5750692 5632309..5632767 1 NC_010002.1 PFAM: Endoribonuclease L-PSP; KEGG: ajs:Ajs_1018 endoribonuclease L-PSP; endoribonuclease L-PSP 5632767 5750692 Daci_5081 Delftia acidovorans SPH-1 endoribonuclease L-PSP YP_001566095.1 5632309 D 398578 CDS YP_001566096.1 160900514 5750693 complement(5632811..5634580) 1 NC_010002.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: ajs:Ajs_1017 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 5634580 5750693 Daci_5082 Delftia acidovorans SPH-1 methyl-accepting chemotaxis sensory transducer YP_001566096.1 5632811 R 398578 CDS YP_001566097.1 160900515 5750694 complement(5634708..5637095) 1 NC_010002.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 5637095 5750694 Daci_5083 Delftia acidovorans SPH-1 DNA topoisomerase IV subunit A YP_001566097.1 5634708 R 398578 CDS YP_001566098.1 160900516 5750695 complement(5637135..5638007) 1 NC_010002.1 PFAM: Lytic transglycosylase catalytic; Transglycosylase domain protein; KEGG: aav:Aave_1341 lytic transglycosylase, catalytic; lytic transglycosylase catalytic subunit 5638007 5750695 Daci_5084 Delftia acidovorans SPH-1 lytic transglycosylase catalytic subunit YP_001566098.1 5637135 R 398578 CDS YP_001566099.1 160900517 5750696 complement(5638011..5639993) 1 NC_010002.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 5639993 5750696 Daci_5085 Delftia acidovorans SPH-1 DNA topoisomerase IV subunit B YP_001566099.1 5638011 R 398578 CDS YP_001566100.1 160900518 5750697 5640154..5641380 1 NC_010002.1 PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_1013 major facilitator superfamily MFS_1; major facilitator transporter 5641380 5750697 Daci_5086 Delftia acidovorans SPH-1 major facilitator transporter YP_001566100.1 5640154 D 398578 CDS YP_001566101.1 160900519 5750698 5641382..5641531 1 NC_010002.1 hypothetical protein 5641531 5750698 Daci_5087 Delftia acidovorans SPH-1 hypothetical protein YP_001566101.1 5641382 D 398578 CDS YP_001566102.1 160900520 5750699 5641533..5642171 1 NC_010002.1 PFAM: Methyltransferase type 11; KEGG: aav:Aave_1338 methyltransferase type 11; type 11 methyltransferase 5642171 5750699 Daci_5088 Delftia acidovorans SPH-1 type 11 methyltransferase YP_001566102.1 5641533 D 398578 CDS YP_001566103.1 160900521 5750700 5642247..5643143 1 NC_010002.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 5643143 5750700 Daci_5089 Delftia acidovorans SPH-1 dihydrodipicolinate synthase YP_001566103.1 5642247 D 398578 CDS YP_001566104.1 160900522 5750701 5643140..5644297 1 NC_010002.1 PFAM: NlpBDapX family lipoprotein; KEGG: ajs:Ajs_1009 NlpBDapX family lipoprotein; NlpB/DapX family lipoprotein 5644297 5750701 Daci_5090 Delftia acidovorans SPH-1 NlpB/DapX family lipoprotein YP_001566104.1 5643140 D 398578 CDS YP_001566105.1 160900523 5750702 complement(5644481..5644765) 1 NC_010002.1 KEGG: ajs:Ajs_1007 hypothetical protein; hypothetical protein 5644765 5750702 Daci_5091 Delftia acidovorans SPH-1 hypothetical protein YP_001566105.1 5644481 R 398578 CDS YP_001566106.1 160900524 5750703 complement(5645153..5646283) 1 NC_010002.1 PFAM: Cupin 4 family protein; SMART: transcription factor jumonji jmjC domain protein; KEGG: aav:Aave_1332 cupin 4 family protein; cupin 4 family protein 5646283 5750703 Daci_5092 Delftia acidovorans SPH-1 cupin 4 family protein YP_001566106.1 5645153 R 398578 CDS YP_001566107.1 160900525 5750704 complement(5646387..5647346) 1 NC_010002.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pna:Pnap_3834 helix-turn-helix-domain containing protein, AraC type; AraC family transcriptional regulator 5647346 5750704 Daci_5093 Delftia acidovorans SPH-1 AraC family transcriptional regulator YP_001566107.1 5646387 R 398578 CDS YP_001566108.1 160900526 5750705 5647607..5649058 1 NC_010002.1 PFAM: Aldehyde Dehydrogenase_; KEGG: net:Neut_2587 aldehyde dehydrogenase; aldehyde dehydrogenase 5649058 5750705 Daci_5094 Delftia acidovorans SPH-1 aldehyde dehydrogenase YP_001566108.1 5647607 D 398578 CDS YP_001566109.1 160900527 5750706 5649211..5649732 1 NC_010002.1 KEGG: ajs:Ajs_1004 fkbp-type peptidyl-prolyl cis-trans isomerase; fkbp-type peptidyl-prolyl cis-trans isomerase 5649732 5750706 Daci_5095 Delftia acidovorans SPH-1 fkbp-type peptidyl-prolyl cis-trans isomerase YP_001566109.1 5649211 D 398578 CDS YP_001566110.1 160900528 5750707 complement(5649800..5650372) 1 NC_010002.1 PFAM: 17 kDa surface antigen; KEGG: pna:Pnap_1189 17 kDa surface antigen; 17 kDa surface antigen 5650372 5750707 Daci_5096 Delftia acidovorans SPH-1 17 kDa surface antigen YP_001566110.1 5649800 R 398578 CDS YP_001566111.1 160900529 5750708 complement(5650518..5651054) 1 NC_010002.1 KEGG: eba:ebA7151 hypothetical protein; hypothetical protein 5651054 5750708 Daci_5097 Delftia acidovorans SPH-1 hypothetical protein YP_001566111.1 5650518 R 398578 CDS YP_001566112.1 160900530 5750709 5651155..5651460 1 NC_010002.1 KEGG: ajs:Ajs_4084 membrane protein; membrane protein 5651460 5750709 Daci_5098 Delftia acidovorans SPH-1 membrane protein YP_001566112.1 5651155 D 398578 CDS YP_001566113.1 160900531 5750710 5651467..5652138 1 NC_010002.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ajs:Ajs_4083 two component transcriptional regulator, winged helix family; two component transcriptional regulator 5652138 5750710 Daci_5099 Delftia acidovorans SPH-1 two component transcriptional regulator YP_001566113.1 5651467 D 398578 CDS YP_001566114.1 160900532 5750711 5652135..5653583 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: ajs:Ajs_4082 integral membrane sensor signal transduction histidine kinase; histidine kinase 5653583 5750711 Daci_5100 Delftia acidovorans SPH-1 histidine kinase YP_001566114.1 5652135 D 398578 CDS YP_001566115.1 160900533 5750712 complement(5653630..5654454) 1 NC_010002.1 KEGG: pna:Pnap_0132 hypothetical protein; hypothetical protein 5654454 5750712 Daci_5101 Delftia acidovorans SPH-1 hypothetical protein YP_001566115.1 5653630 R 398578 CDS YP_001566116.1 160900534 5750713 complement(5654518..5654967) 1 NC_010002.1 KEGG: aav:Aave_1329 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut 5654967 5750713 Daci_5102 Delftia acidovorans SPH-1 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut YP_001566116.1 5654518 R 398578 CDS YP_001566117.1 160900535 5750714 complement(5655038..5655583) 1 NC_010002.1 hypothetical protein 5655583 5750714 Daci_5103 Delftia acidovorans SPH-1 hypothetical protein YP_001566117.1 5655038 R 398578 CDS YP_001566118.1 160900536 5750715 complement(5655601..5656833) 1 NC_010002.1 KEGG: ajs:Ajs_1001 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 5656833 5750715 Daci_5104 Delftia acidovorans SPH-1 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase YP_001566118.1 5655601 R 398578 CDS YP_001566119.1 160900537 5750716 5656927..5658585 1 NC_010002.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 5658585 pyrG 5750716 pyrG Delftia acidovorans SPH-1 CTP synthetase YP_001566119.1 5656927 D 398578 CDS YP_001566120.1 160900538 5750717 5658626..5659483 1 NC_010002.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 5659483 5750717 Daci_5106 Delftia acidovorans SPH-1 2-dehydro-3-deoxyphosphooctonate aldolase YP_001566120.1 5658626 D 398578 CDS YP_001566121.1 160900539 5750718 5659487..5659777 1 NC_010002.1 PFAM: protein of unknown function DUF1330; KEGG: aav:Aave_1325 protein of unknown function DUF1330; hypothetical protein 5659777 5750718 Daci_5107 Delftia acidovorans SPH-1 hypothetical protein YP_001566121.1 5659487 D 398578 CDS YP_001566122.1 160900540 5750719 5660012..5661298 1 NC_010002.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 5661298 eno 5750719 eno Delftia acidovorans SPH-1 phosphopyruvate hydratase YP_001566122.1 5660012 D 398578 CDS YP_001566123.1 160900541 5750720 5661363..5661641 1 NC_010002.1 PFAM: Septum formation initiator; KEGG: vei:Veis_2649 septum formation initiator; septum formation initiator 5661641 5750720 Daci_5109 Delftia acidovorans SPH-1 septum formation initiator YP_001566123.1 5661363 D 398578 CDS YP_001566124.1 160900542 5750721 5661817..5662245 1 NC_010002.1 hypothetical protein 5662245 5750721 Daci_5110 Delftia acidovorans SPH-1 hypothetical protein YP_001566124.1 5661817 D 398578 CDS YP_001566125.1 160900543 5750722 complement(5662258..5663250) 1 NC_010002.1 PFAM: Hsp33 protein; KEGG: ajs:Ajs_0994 HSP33 protein; Hsp33 protein 5663250 5750722 Daci_5111 Delftia acidovorans SPH-1 Hsp33 protein YP_001566125.1 5662258 R 398578 CDS YP_001566126.1 160900544 5750723 complement(5663286..5663810) 1 NC_010002.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: ajs:Ajs_0993 transferase hexapeptide protein; hexapaptide repeat-containing transferase 5663810 5750723 Daci_5112 Delftia acidovorans SPH-1 hexapaptide repeat-containing transferase YP_001566126.1 5663286 R 398578 CDS YP_001566127.1 160900545 5750724 5663865..5664671 1 NC_010002.1 PFAM: protein of unknown function DUF455; KEGG: aav:Aave_1317 protein of unknown function DUF455; hypothetical protein 5664671 5750724 Daci_5113 Delftia acidovorans SPH-1 hypothetical protein YP_001566127.1 5663865 D 398578 CDS YP_001566128.1 160900546 5750725 5664743..5666137 1 NC_010002.1 PFAM: EAL domain protein; Metal-dependent hydrolase HDOD; KEGG: aav:Aave_1316 diguanylate phosphodiesterase; diguanylate phosphodiesterase 5666137 5750725 Daci_5114 Delftia acidovorans SPH-1 diguanylate phosphodiesterase YP_001566128.1 5664743 D 398578 CDS YP_001566129.1 160900547 5750726 5666196..5667485 1 NC_010002.1 PFAM: EAL domain protein; Metal-dependent hydrolase HDOD; KEGG: ajs:Ajs_0990 diguanylate phosphodiesterase; diguanylate phosphodiesterase 5667485 5750726 Daci_5115 Delftia acidovorans SPH-1 diguanylate phosphodiesterase YP_001566129.1 5666196 D 398578 CDS YP_001566130.1 160900548 5750727 complement(5667564..5668562) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0989 uncharacterized protein UPF0065; hypothetical protein 5668562 5750727 Daci_5116 Delftia acidovorans SPH-1 hypothetical protein YP_001566130.1 5667564 R 398578 CDS YP_001566131.1 160900549 5750728 complement(5668694..5669677) 1 NC_010002.1 TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: ajs:Ajs_0988 tyrosine recombinase XerD; tyrosine recombinase XerD 5669677 5750728 Daci_5117 Delftia acidovorans SPH-1 tyrosine recombinase XerD YP_001566131.1 5668694 R 398578 CDS YP_001566132.1 160900550 5750729 complement(5669754..5670716) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: aav:Aave_1312 uncharacterized protein UPF0065; hypothetical protein 5670716 5750729 Daci_5118 Delftia acidovorans SPH-1 hypothetical protein YP_001566132.1 5669754 R 398578 CDS YP_001566133.1 160900551 5750730 5670864..5671952 1 NC_010002.1 PFAM: Auxin Efflux Carrier; KEGG: aav:Aave_1308 auxin efflux carrier; auxin efflux carrier 5671952 5750730 Daci_5119 Delftia acidovorans SPH-1 auxin efflux carrier YP_001566133.1 5670864 D 398578 CDS YP_001566134.1 160900552 5750731 complement(5671982..5672875) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A3439 transcriptional regulator, LysR family; LysR family transcriptional regulator 5672875 5750731 Daci_5120 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001566134.1 5671982 R 398578 CDS YP_001566135.1 160900553 5750732 5673106..5674494 1 NC_010002.1 PFAM: Na+/solute symporter; KEGG: pfl:PFL_1573 sodium-solute symporter, putative; Na+/solute symporter 5674494 5750732 Daci_5121 Delftia acidovorans SPH-1 Na+/solute symporter YP_001566135.1 5673106 D 398578 CDS YP_001566136.1 160900554 5750733 5674519..5675589 1 NC_010002.1 TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: sme:SMc01967 putative agmatinase protein; agmatinase 5675589 5750733 Daci_5122 Delftia acidovorans SPH-1 agmatinase YP_001566136.1 5674519 D 398578 CDS YP_001566137.1 160900555 5750734 complement(5675586..5676632) 1 NC_010002.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mpt:Mpe_A3279 helix-turn-helix, AraC type; AraC family transcriptional regulator 5676632 5750734 Daci_5123 Delftia acidovorans SPH-1 AraC family transcriptional regulator YP_001566137.1 5675586 R 398578 CDS YP_001566138.1 160900556 5750735 complement(5676848..5679895) 1 NC_010002.1 KEGG: azo:azo0498 GGDEF/PAS/PAC-domain containing protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase 5679895 5750735 Daci_5124 Delftia acidovorans SPH-1 PAS/PAC sensor-containing diguanylate cyclase YP_001566138.1 5676848 R 398578 CDS YP_001566139.1 160900557 5750736 complement(5680010..5681065) 1 NC_010002.1 TIGRFAM: iron-sulfur cluster binding protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; domain of unknown function DUF1730; KEGG: ajs:Ajs_0985 putative iron-sulfur cluster binding protein; iron-sulfur cluster-binding protein 5681065 5750736 Daci_5125 Delftia acidovorans SPH-1 iron-sulfur cluster-binding protein YP_001566139.1 5680010 R 398578 CDS YP_001566140.1 160900558 5750737 5681078..5681605 1 NC_010002.1 PFAM: protein of unknown function UPF0079; KEGG: vei:Veis_1712 protein of unknown function UPF0079; hypothetical protein 5681605 5750737 Daci_5126 Delftia acidovorans SPH-1 hypothetical protein YP_001566140.1 5681078 D 398578 CDS YP_001566141.1 160900559 5750738 5681602..5683092 1 NC_010002.1 PFAM: cell wall hydrolase/autolysin; KEGG: aav:Aave_1305 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase 5683092 5750738 Daci_5127 Delftia acidovorans SPH-1 N-acetylmuramoyl-L-alanine amidase YP_001566141.1 5681602 D 398578 CDS YP_001566142.1 160900560 5750739 5683309..5683533 1 NC_010002.1 PFAM: 17 kDa surface antigen; KEGG: ajs:Ajs_0979 17 kDa surface antigen; 17 kDa surface antigen 5683533 5750739 Daci_5128 Delftia acidovorans SPH-1 17 kDa surface antigen YP_001566142.1 5683309 D 398578 CDS YP_001566143.1 160900561 5750740 complement(5683607..5684341) 1 NC_010002.1 PFAM: SNARE associated Golgi protein; KEGG: aav:Aave_1301 DedA protein (DSG-1 protein); hypothetical protein 5684341 5750740 Daci_5129 Delftia acidovorans SPH-1 hypothetical protein YP_001566143.1 5683607 R 398578 CDS YP_001566144.1 160900562 5750741 5684378..5684821 1 NC_010002.1 PFAM: 17 kDa surface antigen; KEGG: ajs:Ajs_0979 17 kDa surface antigen; 17 kDa surface antigen 5684821 5750741 Daci_5130 Delftia acidovorans SPH-1 17 kDa surface antigen YP_001566144.1 5684378 D 398578 CDS YP_001566145.1 160900563 5750742 5684986..5687010 1 NC_010002.1 TIGRFAM: DNA mismatch repair protein MutL; PFAM: ATP-binding region ATPase domain protein; DNA mismatch repair protein domain protein; MutL dimerisation; KEGG: aav:Aave_1300 DNA mismatch repair protein MutL; DNA mismatch repair protein MutL 5687010 5750742 Daci_5131 Delftia acidovorans SPH-1 DNA mismatch repair protein MutL YP_001566145.1 5684986 D 398578 CDS YP_001566146.1 160900564 5750743 complement(5687036..5688040) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_4060 uncharacterized protein UPF0065; hypothetical protein 5688040 5750743 Daci_5132 Delftia acidovorans SPH-1 hypothetical protein YP_001566146.1 5687036 R 398578 CDS YP_001566147.1 160900565 5750744 complement(5688093..5689316) 1 NC_010002.1 KEGG: bxe:Bxe_A2955 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 5689316 5750744 Daci_5133 Delftia acidovorans SPH-1 amidohydrolase YP_001566147.1 5688093 R 398578 CDS YP_001566148.1 160900566 5750745 5689422..5690450 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A2956 transcriptional regulator, LysR family; LysR family transcriptional regulator 5690450 5750745 Daci_5134 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001566148.1 5689422 D 398578 CDS YP_001566149.1 160900567 5750746 complement(5690458..5691939) 1 NC_010002.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: mpt:Mpe_A0867 hypothetical protein; RND efflux system outer membrane lipoprotein 5691939 5750746 Daci_5135 Delftia acidovorans SPH-1 RND efflux system outer membrane lipoprotein YP_001566149.1 5690458 R 398578 CDS YP_001566150.1 160900568 5750747 complement(5691968..5695276) 1 NC_010002.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: pna:Pnap_1299 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; hydrophobe/amphiphile efflux-1 family protein 5695276 5750747 Daci_5136 Delftia acidovorans SPH-1 hydrophobe/amphiphile efflux-1 family protein YP_001566150.1 5691968 R 398578 CDS YP_001566151.1 160900569 5750748 complement(5695306..5696589) 1 NC_010002.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mpt:Mpe_A0869 RND multidrug efflux membrane fusion protein MexE precursor; RND family efflux transporter MFP subunit 5696589 5750748 Daci_5137 Delftia acidovorans SPH-1 RND family efflux transporter MFP subunit YP_001566151.1 5695306 R 398578 CDS YP_001566152.1 160900570 5750749 complement(5696704..5697564) 1 NC_010002.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: aav:Aave_1361 alpha/beta hydrolase fold-3 domain protein; alpha/beta hydrolase domain-containing protein 5697564 5750749 Daci_5138 Delftia acidovorans SPH-1 alpha/beta hydrolase domain-containing protein YP_001566152.1 5696704 R 398578 CDS YP_001566153.1 160900571 5750750 5697740..5698654 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_1360 transcriptional regulator, LysR family; LysR family transcriptional regulator 5698654 5750750 Daci_5139 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001566153.1 5697740 D 398578 CDS YP_001566154.1 160900572 5750751 5699007..5700350 1 NC_010002.1 converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; glutamate dehydrogenase 5700350 5750751 Daci_5140 Delftia acidovorans SPH-1 glutamate dehydrogenase YP_001566154.1 5699007 D 398578 CDS YP_001566155.1 160900573 5750752 complement(5700427..5702649) 1 NC_010002.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: mpt:Mpe_B0326 conserved hypothetical ATP-dependent helicase; DEAD/DEAH box helicase 5702649 5750752 Daci_5141 Delftia acidovorans SPH-1 DEAD/DEAH box helicase YP_001566155.1 5700427 R 398578 CDS YP_001566156.1 160900574 5750753 complement(5702668..5703972) 1 NC_010002.1 KEGG: mpt:Mpe_B0327 hypothetical protein; hypothetical protein 5703972 5750753 Daci_5142 Delftia acidovorans SPH-1 hypothetical protein YP_001566156.1 5702668 R 398578 CDS YP_001566157.1 160900575 5750754 complement(5703969..5706365) 1 NC_010002.1 KEGG: psa:PST_3463 hypothetical protein; hypothetical protein 5706365 5750754 Daci_5143 Delftia acidovorans SPH-1 hypothetical protein YP_001566157.1 5703969 R 398578 CDS YP_001566158.1 160900576 5750755 5706749..5707468 1 NC_010002.1 KEGG: ajs:Ajs_4234 hypothetical protein; hypothetical protein 5707468 5750755 Daci_5144 Delftia acidovorans SPH-1 hypothetical protein YP_001566158.1 5706749 D 398578 CDS YP_001566159.1 160900577 5750756 complement(5707665..5708993) 1 NC_010002.1 PFAM: beta-lactamase; KEGG: reh:H16_B1574 beta-lactamase class C; 6-aminohexanoate-dimer hydrolase 5708993 5750756 Daci_5145 Delftia acidovorans SPH-1 6-aminohexanoate-dimer hydrolase YP_001566159.1 5707665 R 398578 CDS YP_001566160.1 160900578 5750757 complement(5709103..5709975) 1 NC_010002.1 KEGG: ajs:Ajs_3300 hypothetical protein; hypothetical protein 5709975 5750757 Daci_5146 Delftia acidovorans SPH-1 hypothetical protein YP_001566160.1 5709103 R 398578 CDS YP_001566161.1 160900579 5750758 5710017..5711027 1 NC_010002.1 KEGG: aav:Aave_1297 hypothetical protein; hypothetical protein 5711027 5750758 Daci_5147 Delftia acidovorans SPH-1 hypothetical protein YP_001566161.1 5710017 D 398578 CDS YP_001566162.1 160900580 5750759 complement(5711055..5712494) 1 NC_010002.1 KEGG: dge:Dgeo_1940 hypothetical protein; hypothetical protein 5712494 5750759 Daci_5148 Delftia acidovorans SPH-1 hypothetical protein YP_001566162.1 5711055 R 398578 CDS YP_001566163.1 160900581 5750760 5712707..5714476 1 NC_010002.1 PFAM: Ankyrin; KEGG: bur:Bcep18194_B0772 hypothetical protein; ankyrin 5714476 5750760 Daci_5149 Delftia acidovorans SPH-1 ankyrin YP_001566163.1 5712707 D 398578 CDS YP_001566164.1 160900582 5750761 complement(5714483..5715733) 1 NC_010002.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: mms:mma_0255 hypothetical protein; hypothetical protein 5715733 5750761 Daci_5150 Delftia acidovorans SPH-1 hypothetical protein YP_001566164.1 5714483 R 398578 CDS YP_001566165.1 160900583 5750762 complement(5715908..5716873) 1 NC_010002.1 PFAM: Rhodanese domain protein; KEGG: mms:mma_0256 thiosulfate sulfurtransferase; rhodanese domain-containing protein 5716873 5750762 Daci_5151 Delftia acidovorans SPH-1 rhodanese domain-containing protein YP_001566165.1 5715908 R 398578 CDS YP_001566166.1 160900584 5750763 5717033..5718274 1 NC_010002.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rfr:Rfer_1536 drug resistance transporter Bcr/CflA subfamily; Bcr/CflA subfamily drug resistance transporter 5718274 5750763 Daci_5152 Delftia acidovorans SPH-1 Bcr/CflA subfamily drug resistance transporter YP_001566166.1 5717033 D 398578 CDS YP_001566167.1 160900585 5750764 5718304..5719293 1 NC_010002.1 KEGG: ajs:Ajs_3111 tRNA delta(2)-isopentenylpyrophosphate transferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; tRNA delta(2)-isopentenylpyrophosphate transferase 5719293 5750764 Daci_5153 Delftia acidovorans SPH-1 tRNA delta(2)-isopentenylpyrophosphate transferase YP_001566167.1 5718304 D 398578 CDS YP_001566168.1 160900586 5750765 5719310..5720026 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_3112 ABC transporter related; ABC transporter-like protein 5720026 5750765 Daci_5154 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001566168.1 5719310 D 398578 CDS YP_001566169.1 160900587 5750766 5720046..5722613 1 NC_010002.1 PFAM: protein of unknown function DUF214; KEGG: ajs:Ajs_3114 protein of unknown function DUF214; hypothetical protein 5722613 5750766 Daci_5155 Delftia acidovorans SPH-1 hypothetical protein YP_001566169.1 5720046 D 398578 CDS YP_001566170.1 160900588 5750767 5722630..5723697 1 NC_010002.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: ajs:Ajs_3115 pyridoxal-5'-phosphate-dependent enzyme, beta subunit; pyridoxal-5'-phosphate-dependent protein subunit beta 5723697 5750767 Daci_5156 Delftia acidovorans SPH-1 pyridoxal-5'-phosphate-dependent protein subunit beta YP_001566170.1 5722630 D 398578 CDS YP_001566171.1 160900589 5750768 5723701..5724825 1 NC_010002.1 KEGG: ajs:Ajs_3116 secreted hydrolase-like protein; secreted hydrolase-like protein 5724825 5750768 Daci_5157 Delftia acidovorans SPH-1 secreted hydrolase-like protein YP_001566171.1 5723701 D 398578 CDS YP_001566172.1 160900590 5750769 5724896..5725129 1 NC_010002.1 TIGRFAM: addiction module antidote protein, CC2985 family; PFAM: protein of unknown function UPF0156; KEGG: mca:MCA2652 hypothetical protein; CopG/Arc/MetJ family addiction module antidote protein 5725129 5750769 Daci_5158 Delftia acidovorans SPH-1 CopG/Arc/MetJ family addiction module antidote protein YP_001566172.1 5724896 D 398578 CDS YP_001566173.1 160900591 5750770 5725126..5725455 1 NC_010002.1 PFAM: plasmid stabilization system; KEGG: mca:MCA2653 hypothetical protein; plasmid stabilization system protein 5725455 5750770 Daci_5159 Delftia acidovorans SPH-1 plasmid stabilization system protein YP_001566173.1 5725126 D 398578 CDS YP_001566174.1 160900592 5750771 complement(5725528..5726526) 1 NC_010002.1 PFAM: inner-membrane translocator; KEGG: aav:Aave_1285 inner-membrane translocator; inner-membrane translocator 5726526 5750771 Daci_5160 Delftia acidovorans SPH-1 inner-membrane translocator YP_001566174.1 5725528 R 398578 CDS YP_001566175.1 160900593 5750772 complement(5726554..5727438) 1 NC_010002.1 PFAM: inner-membrane translocator; KEGG: aav:Aave_1284 inner-membrane translocator; inner-membrane translocator 5727438 5750772 Daci_5161 Delftia acidovorans SPH-1 inner-membrane translocator YP_001566175.1 5726554 R 398578 CDS YP_001566176.1 160900594 5750773 complement(5727496..5728692) 1 NC_010002.1 KEGG: ajs:Ajs_3120 putative substrate-binding periplasmic (pbp) ABC transporter protein; putative substrate-binding periplasmic (pbp) ABC transporter protein 5728692 5750773 Daci_5162 Delftia acidovorans SPH-1 putative substrate-binding periplasmic (pbp) ABC transporter protein YP_001566176.1 5727496 R 398578 CDS YP_001566177.1 160900595 5750774 complement(5728792..5729502) 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_3121 ABC transporter related; ABC transporter-like protein 5729502 5750774 Daci_5163 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001566177.1 5728792 R 398578 CDS YP_001566178.1 160900596 5750775 complement(5729504..5730274) 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_1280 ABC transporter-related protein; ABC transporter-like protein 5730274 5750775 Daci_5164 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001566178.1 5729504 R 398578 CDS YP_001566179.1 160900597 5750776 complement(5730888..5731397) 1 NC_010002.1 PFAM: protein of unknown function DUF1178; KEGG: vei:Veis_4072 protein of unknown function DUF1178; hypothetical protein 5731397 5750776 Daci_5165 Delftia acidovorans SPH-1 hypothetical protein YP_001566179.1 5730888 R 398578 CDS YP_001566180.1 160900598 5750777 complement(5731436..5731741) 1 NC_010002.1 KEGG: ajs:Ajs_0971 putative transmembrane protein; putative transmembrane protein 5731741 5750777 Daci_5166 Delftia acidovorans SPH-1 putative transmembrane protein YP_001566180.1 5731436 R 398578 CDS YP_001566181.1 160900599 5750778 complement(5731797..5733290) 1 NC_010002.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N 5733290 5750778 Daci_5167 Delftia acidovorans SPH-1 NADH dehydrogenase subunit N YP_001566181.1 5731797 R 398578 CDS YP_001566182.1 160900600 5750779 complement(5733315..5734790) 1 NC_010002.1 KEGG: ajs:Ajs_0969 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit M 5734790 5750779 Daci_5168 Delftia acidovorans SPH-1 proton-translocating NADH-quinone oxidoreductase subunit M YP_001566182.1 5733315 R 398578 CDS YP_001566183.1 160900601 5750780 complement(5734807..5736846) 1 NC_010002.1 KEGG: ajs:Ajs_0968 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit L 5736846 5750780 Daci_5169 Delftia acidovorans SPH-1 proton-translocating NADH-quinone oxidoreductase subunit L YP_001566183.1 5734807 R 398578 CDS YP_001566184.1 160900602 5750781 complement(5736876..5737184) 1 NC_010002.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: aav:Aave_1273 NADH-ubiquinone oxidoreductase, chain 4L; NADH-ubiquinone oxidoreductase subunit 4L 5737184 5750781 Daci_5170 Delftia acidovorans SPH-1 NADH-ubiquinone oxidoreductase subunit 4L YP_001566184.1 5736876 R 398578 CDS YP_001566185.1 160900603 5750782 complement(5737181..5737849) 1 NC_010002.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: ajs:Ajs_0966 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 5737849 5750782 Daci_5171 Delftia acidovorans SPH-1 NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 YP_001566185.1 5737181 R 398578 CDS YP_001566186.1 160900604 5750783 complement(5737884..5738393) 1 NC_010002.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 5738393 5750783 Daci_5172 Delftia acidovorans SPH-1 NADH dehydrogenase subunit I YP_001566186.1 5737884 R 398578 CDS YP_001566187.1 160900605 5750784 complement(5738405..5739481) 1 NC_010002.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: aav:Aave_1270 respiratory-chain NADH dehydrogenase, subunit 1; NADH dehydrogenase 5739481 5750784 Daci_5173 Delftia acidovorans SPH-1 NADH dehydrogenase YP_001566187.1 5738405 R 398578 CDS YP_001566188.1 160900606 5750785 complement(5739478..5741601) 1 NC_010002.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit G 5741601 5750785 Daci_5174 Delftia acidovorans SPH-1 NADH dehydrogenase subunit G YP_001566188.1 5739478 R 398578 CDS YP_001566189.1 160900607 5750786 complement(5741617..5742975) 1 NC_010002.1 KEGG: ajs:Ajs_0962 NADH-quinone oxidoreductase, F subunit; TIGRFAM: NADH-quinone oxidoreductase, F subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH-quinone oxidoreductase subunit F 5742975 5750786 Daci_5175 Delftia acidovorans SPH-1 NADH-quinone oxidoreductase subunit F YP_001566189.1 5741617 R 398578 CDS YP_001566190.1 160900608 5750787 complement(5742972..5743463) 1 NC_010002.1 TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: aav:Aave_1267 NADH-quinone oxidoreductase, E subunit; NADH-quinone oxidoreductase subunit E 5743463 5750787 Daci_5176 Delftia acidovorans SPH-1 NADH-quinone oxidoreductase subunit E YP_001566190.1 5742972 R 398578 CDS YP_001566191.1 160900609 5750788 complement(5743460..5744713) 1 NC_010002.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D 5744713 5750788 Daci_5177 Delftia acidovorans SPH-1 NADH dehydrogenase subunit D YP_001566191.1 5743460 R 398578 CDS YP_001566192.1 160900610 5750789 complement(5744746..5745357) 1 NC_010002.1 KEGG: ajs:Ajs_0959 NADH (or F420H2) dehydrogenase, subunit C; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; NADH (or F420H2) dehydrogenase subunit C 5745357 5750789 Daci_5178 Delftia acidovorans SPH-1 NADH (or F420H2) dehydrogenase subunit C YP_001566192.1 5744746 R 398578 CDS YP_001566193.1 160900611 5750790 complement(5745365..5745844) 1 NC_010002.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 5745844 5750790 Daci_5179 Delftia acidovorans SPH-1 NADH dehydrogenase subunit B YP_001566193.1 5745365 R 398578 CDS YP_001566194.1 160900612 5750791 complement(5745868..5746227) 1 NC_010002.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: aav:Aave_1263 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; NADH-ubiquinone/plastoquinone oxidoreductase subunit 3 5746227 5750791 Daci_5180 Delftia acidovorans SPH-1 NADH-ubiquinone/plastoquinone oxidoreductase subunit 3 YP_001566194.1 5745868 R 398578 CDS YP_001566195.1 160900613 5750793 complement(5746503..5746895) 1 NC_010002.1 TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: aav:Aave_1262 preprotein translocase, SecG subunit; preprotein translocase subunit SecG 5746895 5750793 Daci_5181 Delftia acidovorans SPH-1 preprotein translocase subunit SecG YP_001566195.1 5746503 R 398578 CDS YP_001566196.1 160900614 5750794 complement(5746954..5747700) 1 NC_010002.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 5747700 tpiA 5750794 tpiA Delftia acidovorans SPH-1 triosephosphate isomerase YP_001566196.1 5746954 R 398578 CDS YP_001566197.1 160900615 5750795 complement(5747703..5748704) 1 NC_010002.1 TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: aav:Aave_1260 alcohol dehydrogenase, zinc-binding domain protein; PIG3 family NAD(P)H quinone oxidoreductase 5748704 5750795 Daci_5183 Delftia acidovorans SPH-1 PIG3 family NAD(P)H quinone oxidoreductase YP_001566197.1 5747703 R 398578 CDS YP_001566198.1 160900616 5750796 complement(5748824..5751085) 1 NC_010002.1 KEGG: aav:Aave_1259 3' exoribonuclease; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH type 1 domain protein; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; SMART: KH domain protein; polynucleotide phosphorylase/polyadenylase 5751085 5750796 Daci_5184 Delftia acidovorans SPH-1 polynucleotide phosphorylase/polyadenylase YP_001566198.1 5748824 R 398578 CDS YP_001566199.1 160900617 5750797 complement(5751293..5751559) 1 NC_010002.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 5751559 rpsO 5750797 rpsO Delftia acidovorans SPH-1 30S ribosomal protein S15 YP_001566199.1 5751293 R 398578 CDS YP_001566200.1 160900618 5750798 5751799..5752113 1 NC_010002.1 KEGG: vei:Veis_2820 hypothetical protein; hypothetical protein 5752113 5750798 Daci_5186 Delftia acidovorans SPH-1 hypothetical protein YP_001566200.1 5751799 D 398578 CDS YP_001566201.1 160900619 5750799 5752363..5752926 1 NC_010002.1 KEGG: ajs:Ajs_3182 putative type-4 fimbrial pilin related signal peptide protein; putative type-4 fimbrial pilin related signal peptide protein 5752926 5750799 Daci_5187 Delftia acidovorans SPH-1 putative type-4 fimbrial pilin related signal peptide protein YP_001566201.1 5752363 D 398578 CDS YP_001566202.1 160900620 5750800 5752917..5753537 1 NC_010002.1 TIGRFAM: type IV pilus modification protein PilV; KEGG: ajs:Ajs_3183 type IV pilus modification protein PilV; type IV pilus modification protein PilV 5753537 5750800 Daci_5188 Delftia acidovorans SPH-1 type IV pilus modification protein PilV YP_001566202.1 5752917 D 398578 CDS YP_001566203.1 160900621 5750801 5753534..5754409 1 NC_010002.1 KEGG: ajs:Ajs_3186 hypothetical protein; hypothetical protein 5754409 5750801 Daci_5189 Delftia acidovorans SPH-1 hypothetical protein YP_001566203.1 5753534 D 398578 CDS YP_001566204.1 160900622 5750802 5754406..5755170 1 NC_010002.1 KEGG: ajs:Ajs_3187 hypothetical protein; hypothetical protein 5755170 5750802 Daci_5190 Delftia acidovorans SPH-1 hypothetical protein YP_001566204.1 5754406 D 398578 CDS YP_001566205.1 160900623 5750803 5755186..5757582 1 NC_010002.1 PFAM: FG-GAP repeat protein; KEGG: ajs:Ajs_3188 type 4 fimbrial biogenesis protein PilY1; FG-GAP repeat-containing protein 5757582 5750803 Daci_5191 Delftia acidovorans SPH-1 FG-GAP repeat-containing protein YP_001566205.1 5755186 D 398578 CDS YP_001566206.1 160900624 5750804 5757579..5758010 1 NC_010002.1 KEGG: ajs:Ajs_3189 fimbrial protein pilin; fimbrial protein pilin 5758010 5750804 Daci_5192 Delftia acidovorans SPH-1 fimbrial protein pilin YP_001566206.1 5757579 D 398578 CDS YP_001566207.1 160900625 5750805 5758127..5758693 1 NC_010002.1 KEGG: ajs:Ajs_3181 N-terminal methylation site; N-terminal methylation site-containing protein 5758693 5750805 Daci_5193 Delftia acidovorans SPH-1 N-terminal methylation site-containing protein YP_001566207.1 5758127 D 398578 CDS YP_001566208.1 160900626 5750806 5758771..5759403 1 NC_010002.1 TIGRFAM: type IV pilus modification protein PilV; KEGG: ajs:Ajs_3183 type IV pilus modification protein PilV; type IV pilus modification protein PilV 5759403 5750806 Daci_5194 Delftia acidovorans SPH-1 type IV pilus modification protein PilV YP_001566208.1 5758771 D 398578 CDS YP_001566209.1 160900627 5750807 5759406..5760338 1 NC_010002.1 KEGG: ajs:Ajs_3186 hypothetical protein; hypothetical protein 5760338 5750807 Daci_5195 Delftia acidovorans SPH-1 hypothetical protein YP_001566209.1 5759406 D 398578 CDS YP_001566210.1 160900628 5750808 5760358..5761092 1 NC_010002.1 KEGG: ajs:Ajs_3187 hypothetical protein; hypothetical protein 5761092 5750808 Daci_5196 Delftia acidovorans SPH-1 hypothetical protein YP_001566210.1 5760358 D 398578 CDS YP_001566211.1 160900629 5750809 5761165..5764713 1 NC_010002.1 PFAM: FG-GAP repeat protein; KEGG: ajs:Ajs_3188 type 4 fimbrial biogenesis protein PilY1; FG-GAP repeat-containing protein 5764713 5750809 Daci_5197 Delftia acidovorans SPH-1 FG-GAP repeat-containing protein YP_001566211.1 5761165 D 398578 CDS YP_001566212.1 160900630 5750810 5764710..5765156 1 NC_010002.1 KEGG: ajs:Ajs_3189 fimbrial protein pilin; fimbrial protein pilin 5765156 5750810 Daci_5198 Delftia acidovorans SPH-1 fimbrial protein pilin YP_001566212.1 5764710 D 398578 CDS YP_001566213.1 160900631 5750811 5765221..5766330 1 NC_010002.1 KEGG: ajs:Ajs_3190 riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein; riboflavin biosynthesis protein RibD 5766330 5750811 Daci_5199 Delftia acidovorans SPH-1 riboflavin biosynthesis protein RibD YP_001566213.1 5765221 D 398578 CDS YP_001566214.1 160900632 5750812 5766414..5768228 1 NC_010002.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: ajs:Ajs_3191 phospholipase D/transphosphatidylase; phospholipase D/transphosphatidylase 5768228 5750812 Daci_5200 Delftia acidovorans SPH-1 phospholipase D/transphosphatidylase YP_001566214.1 5766414 D 398578 CDS YP_001566215.1 160900633 5750813 complement(5768242..5769231) 1 NC_010002.1 PFAM: dihydrouridine synthase DuS; KEGG: aav:Aave_1255 dihydrouridine synthase, DuS; dihydrouridine synthase DuS 5769231 5750813 Daci_5201 Delftia acidovorans SPH-1 dihydrouridine synthase DuS YP_001566215.1 5768242 R 398578 CDS YP_001566216.1 160900634 5750814 5769388..5769987 1 NC_010002.1 KEGG: aav:Aave_1254 hypothetical protein; hypothetical protein 5769987 5750814 Daci_5202 Delftia acidovorans SPH-1 hypothetical protein YP_001566216.1 5769388 D 398578 CDS YP_001566217.1 160900635 5750815 complement(5770016..5771227) 1 NC_010002.1 PFAM: methyltransferase small; Methyltransferase type 11; KEGG: ajs:Ajs_3193 methyltransferase small; methyltransferase small 5771227 5750815 Daci_5203 Delftia acidovorans SPH-1 methyltransferase small YP_001566217.1 5770016 R 398578 CDS YP_001566218.1 160900636 5750816 complement(5771273..5771794) 1 NC_010002.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ajs:Ajs_3194 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 5771794 5750816 Daci_5204 Delftia acidovorans SPH-1 N-acetyltransferase GCN5 YP_001566218.1 5771273 R 398578 CDS YP_001566219.1 160900637 5750817 complement(5772052..5773548) 1 NC_010002.1 PFAM: Aldehyde Dehydrogenase_; KEGG: ajs:Ajs_3195 aldehyde dehydrogenase; aldehyde dehydrogenase 5773548 5750817 Daci_5205 Delftia acidovorans SPH-1 aldehyde dehydrogenase YP_001566219.1 5772052 R 398578 CDS YP_001566220.1 160900638 5750818 complement(5773679..5774032) 1 NC_010002.1 KEGG: aav:Aave_1250 hypothetical protein; hypothetical protein 5774032 5750818 Daci_5206 Delftia acidovorans SPH-1 hypothetical protein YP_001566220.1 5773679 R 398578 CDS YP_001566221.1 160900639 5750819 complement(5774063..5776675) 1 NC_010002.1 KEGG: ajs:Ajs_3198 ATPase AAA-2 domain protein; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATP-dependent chaperone ClpB 5776675 5750819 Daci_5207 Delftia acidovorans SPH-1 ATP-dependent chaperone ClpB YP_001566221.1 5774063 R 398578 CDS YP_001566222.1 160900640 5750820 complement(5776809..5777753) 1 NC_010002.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: rso:RS05428 probable transcription regulator protein; AraC family transcriptional regulator 5777753 5750820 Daci_5208 Delftia acidovorans SPH-1 AraC family transcriptional regulator YP_001566222.1 5776809 R 398578 CDS YP_001566223.1 160900641 5750821 5777786..5778712 1 NC_010002.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ppu:PP_4604 hypothetical protein; hypothetical protein 5778712 5750821 Daci_5209 Delftia acidovorans SPH-1 hypothetical protein YP_001566223.1 5777786 D 398578 CDS YP_001566224.1 160900642 5750822 complement(5778725..5779186) 1 NC_010002.1 PFAM: molybdopterin biosynthesis MoaE protein; KEGG: ajs:Ajs_3199 molybdopterin biosynthesis MoaE; molybdopterin biosynthesis MoaE protein 5779186 5750822 Daci_5210 Delftia acidovorans SPH-1 molybdopterin biosynthesis MoaE protein YP_001566224.1 5778725 R 398578 CDS YP_001566225.1 160900643 5750823 5779293..5779547 1 NC_010002.1 KEGG: aav:Aave_1246 hypothetical protein; hypothetical protein 5779547 5750823 Daci_5211 Delftia acidovorans SPH-1 hypothetical protein YP_001566225.1 5779293 D 398578 CDS YP_001566226.1 160900644 5750824 5779556..5779900 1 NC_010002.1 KEGG: ajs:Ajs_3201 hypothetical protein; hypothetical protein 5779900 5750824 Daci_5212 Delftia acidovorans SPH-1 hypothetical protein YP_001566226.1 5779556 D 398578 CDS YP_001566227.1 160900645 5750825 5780196..5781131 1 NC_010002.1 TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; KEGG: aav:Aave_1243 dihydrodipicolinate synthase; dihydrodipicolinate synthase 5781131 5750825 Daci_5213 Delftia acidovorans SPH-1 dihydrodipicolinate synthase YP_001566227.1 5780196 D 398578 CDS YP_001566228.1 160900646 5750826 complement(5781077..5781430) 1 NC_010002.1 KEGG: bbt:BBta_6747 putative resolvase (site-specific recombinase); hypothetical protein 5781430 5750826 Daci_5214 Delftia acidovorans SPH-1 hypothetical protein YP_001566228.1 5781077 R 398578 CDS YP_001566229.1 160900647 5750827 complement(5781436..5781711) 1 NC_010002.1 TIGRFAM: molybdopterin converting factor, subunit 1; MoaD family protein; PFAM: thiamineS protein; KEGG: aav:Aave_1242 molybdopterin converting factor, subunit 1; molybdopterin converting factor subunit 1 5781711 5750827 Daci_5215 Delftia acidovorans SPH-1 molybdopterin converting factor subunit 1 YP_001566229.1 5781436 R 398578 CDS YP_001566230.1 160900648 5750828 complement(5781708..5782943) 1 NC_010002.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: ajs:Ajs_3203 molybdenum cofactor synthesis domain; molybdenum cofactor synthesis domain-containing protein 5782943 5750828 Daci_5216 Delftia acidovorans SPH-1 molybdenum cofactor synthesis domain-containing protein YP_001566230.1 5781708 R 398578 CDS YP_001566231.1 160900649 5750829 complement(5782953..5783513) 1 NC_010002.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: ajs:Ajs_3204 molybdopterin-guanine dinucleotide biosynthesis protein B; molybdopterin-guanine dinucleotide biosynthesis protein B 5783513 5750829 Daci_5217 Delftia acidovorans SPH-1 molybdopterin-guanine dinucleotide biosynthesis protein B YP_001566231.1 5782953 R 398578 CDS YP_001566232.1 160900650 5750830 complement(5783560..5784987) 1 NC_010002.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 5784987 5750830 Daci_5218 Delftia acidovorans SPH-1 threonine synthase YP_001566232.1 5783560 R 398578 CDS YP_001566233.1 160900651 5750831 complement(5785128..5786477) 1 NC_010002.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 5786477 5750831 Daci_5219 Delftia acidovorans SPH-1 homoserine dehydrogenase YP_001566233.1 5785128 R 398578 CDS YP_001566234.1 160900652 5750832 complement(5786586..5787821) 1 NC_010002.1 broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; aminotransferase AlaT 5787821 5750832 Daci_5220 Delftia acidovorans SPH-1 aminotransferase AlaT YP_001566234.1 5786586 R 398578 CDS YP_001566235.1 160900653 5750833 5787992..5788360 1 NC_010002.1 PFAM: protein of unknown function DUF498; KEGG: aav:Aave_1236 protein of unknown function DUF498; hypothetical protein 5788360 5750833 Daci_5221 Delftia acidovorans SPH-1 hypothetical protein YP_001566235.1 5787992 D 398578 CDS YP_001566236.1 160900654 5750834 5788499..5788984 1 NC_010002.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: aav:Aave_1235 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 5788984 5750834 Daci_5222 Delftia acidovorans SPH-1 alkyl hydroperoxide reductase YP_001566236.1 5788499 D 398578 CDS YP_001566237.1 160900655 5750835 5789161..5790978 1 NC_010002.1 PFAM: PhoH family protein; SMART: Nucleotide binding protein PINc; KEGG: ajs:Ajs_3210 PhoH family protein; PhoH family protein 5790978 5750835 Daci_5223 Delftia acidovorans SPH-1 PhoH family protein YP_001566237.1 5789161 D 398578 CDS YP_001566238.1 160900656 5750836 5790982..5791380 1 NC_010002.1 KEGG: aav:Aave_1233 hypothetical protein; hypothetical protein 5791380 5750836 Daci_5224 Delftia acidovorans SPH-1 hypothetical protein YP_001566238.1 5790982 D 398578 CDS YP_001566239.1 160900657 5750837 complement(5791454..5792887) 1 NC_010002.1 KEGG: ajs:Ajs_3212 replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase; replicative DNA helicase 5792887 5750837 Daci_5225 Delftia acidovorans SPH-1 replicative DNA helicase YP_001566239.1 5791454 R 398578 CDS YP_001566240.1 160900658 5750838 complement(5793020..5793472) 1 NC_010002.1 PFAM: ribosomal protein L9; KEGG: ajs:Ajs_3213 ribosomal protein L9; 50S ribosomal protein L9 5793472 5750838 Daci_5226 Delftia acidovorans SPH-1 50S ribosomal protein L9 YP_001566240.1 5793020 R 398578 CDS YP_001566241.1 160900659 5750839 complement(5793484..5793765) 1 NC_010002.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 5793765 rpsR 5750839 rpsR Delftia acidovorans SPH-1 30S ribosomal protein S18 YP_001566241.1 5793484 R 398578 CDS YP_001566242.1 160900660 5750840 complement(5793784..5794074) 1 NC_010002.1 KEGG: ajs:Ajs_3215 putative primosomal replication protein; putative primosomal replication protein 5794074 5750840 Daci_5228 Delftia acidovorans SPH-1 putative primosomal replication protein YP_001566242.1 5793784 R 398578 CDS YP_001566243.1 160900661 5750841 complement(5794101..5794463) 1 NC_010002.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 5794463 rpsF 5750841 rpsF Delftia acidovorans SPH-1 30S ribosomal protein S6 YP_001566243.1 5794101 R 398578 CDS YP_001566244.1 160900662 5750842 5794771..5795316 1 NC_010002.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE 5795316 5750842 Daci_5230 Delftia acidovorans SPH-1 heat shock protein GrpE YP_001566244.1 5794771 D 398578 CDS YP_001566245.1 160900663 5750843 5795431..5797377 1 NC_010002.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 5797377 dnaK 5750843 dnaK Delftia acidovorans SPH-1 molecular chaperone DnaK YP_001566245.1 5795431 D 398578 CDS YP_001566246.1 160900664 5750844 5797478..5798620 1 NC_010002.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ 5798620 5750844 Daci_5232 Delftia acidovorans SPH-1 chaperone protein DnaJ YP_001566246.1 5797478 D 398578 CDS YP_001566247.1 160900665 5750845 complement(5798690..5799940) 1 NC_010002.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: hiq:CGSHiGG_00130 Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein 5799940 5750845 Daci_5233 Delftia acidovorans SPH-1 Sel1 domain-containing protein YP_001566247.1 5798690 R 398578 CDS YP_001566248.1 160900666 5750846 5800182..5801126 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_3228 transcriptional regulator, LysR family; LysR family transcriptional regulator 5801126 5750846 Daci_5234 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001566248.1 5800182 D 398578 CDS YP_001566249.1 160900667 5750847 5801145..5802611 1 NC_010002.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 5802611 5750847 Daci_5235 Delftia acidovorans SPH-1 isopropylmalate isomerase large subunit YP_001566249.1 5801145 D 398578 CDS YP_001566250.1 160900668 5750848 5802643..5802768 1 NC_010002.1 PFAM: Entericidin EcnAB; KEGG: ajs:Ajs_3230 entericidin EcnAB; entericidin EcnAB 5802768 5750848 Daci_5236 Delftia acidovorans SPH-1 entericidin EcnAB YP_001566250.1 5802643 D 398578 CDS YP_001566251.1 160900669 5750849 5802789..5803442 1 NC_010002.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 5803442 leuD 5750849 leuD Delftia acidovorans SPH-1 isopropylmalate isomerase small subunit YP_001566251.1 5802789 D 398578 CDS YP_001566252.1 160900670 5750850 5803539..5804609 1 NC_010002.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 5804609 5750850 Daci_5238 Delftia acidovorans SPH-1 3-isopropylmalate dehydrogenase YP_001566252.1 5803539 D 398578 CDS YP_001566253.1 160900671 5750851 5805000..5806112 1 NC_010002.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 5806112 5750851 Daci_5239 Delftia acidovorans SPH-1 aspartate-semialdehyde dehydrogenase YP_001566253.1 5805000 D 398578 CDS YP_001566254.1 160900672 5750852 5806480..5809374 1 NC_010002.1 KEGG: aav:Aave_1218 putative transmembrane protein; putative transmembrane protein 5809374 5750852 Daci_5240 Delftia acidovorans SPH-1 putative transmembrane protein YP_001566254.1 5806480 D 398578 CDS YP_001566255.1 160900673 5750853 5809488..5810336 1 NC_010002.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 5810336 truA 5750853 truA Delftia acidovorans SPH-1 tRNA pseudouridine synthase A YP_001566255.1 5809488 D 398578 CDS YP_001566256.1 160900674 5750854 5810417..5811091 1 NC_010002.1 PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: aav:Aave_1216 phosphoribosylanthranilate isomerase; phosphoribosylanthranilate isomerase 5811091 5750854 Daci_5242 Delftia acidovorans SPH-1 phosphoribosylanthranilate isomerase YP_001566256.1 5810417 D 398578 CDS YP_001566257.1 160900675 5750855 5811069..5812325 1 NC_010002.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 5812325 5750855 Daci_5243 Delftia acidovorans SPH-1 tryptophan synthase subunit beta YP_001566257.1 5811069 D 398578 CDS YP_001566258.1 160900676 5750856 5812322..5813131 1 NC_010002.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 5813131 trpA 5750856 trpA Delftia acidovorans SPH-1 tryptophan synthase subunit alpha YP_001566258.1 5812322 D 398578 CDS YP_001566259.1 160900677 5750857 5813197..5814072 1 NC_010002.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; KEGG: aav:Aave_1213 acetyl-CoA carboxylase, carboxyl transferase, beta subunit; acetyl-CoA carboxylase, carboxyl transferase subunit beta 5814072 5750857 Daci_5245 Delftia acidovorans SPH-1 acetyl-CoA carboxylase, carboxyl transferase subunit beta YP_001566259.1 5813197 D 398578 CDS YP_001566260.1 160900678 5750858 complement(5814156..5814800) 1 NC_010002.1 PFAM: protein of unknown function YGGT; KEGG: aav:Aave_1212 protein of unknown function YGGT; hypothetical protein 5814800 5750858 Daci_5246 Delftia acidovorans SPH-1 hypothetical protein YP_001566260.1 5814156 R 398578 CDS YP_001566261.1 160900679 5750859 5814804..5815478 1 NC_010002.1 PFAM: peptidase S16 lon domain protein; KEGG: aav:Aave_1211 peptidase S16, lon domain protein; peptidase S16 lon domain-containing protein 5815478 5750859 Daci_5247 Delftia acidovorans SPH-1 peptidase S16 lon domain-containing protein YP_001566261.1 5814804 D 398578 CDS YP_001566262.1 160900680 5750860 5815724..5817283 1 NC_010002.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 5817283 lysS 5750860 lysS Delftia acidovorans SPH-1 lysyl-tRNA synthetase YP_001566262.1 5815724 D 398578 CDS YP_001566263.1 160900681 5750861 5817376..5818392 1 NC_010002.1 KEGG: rba:RB9964 hypothetical protein-transmembrane prediction; transmembrane prediction 5818392 5750861 Daci_5249 Delftia acidovorans SPH-1 transmembrane prediction YP_001566263.1 5817376 D 398578 CDS YP_001566264.1 160900682 5750862 5818503..5819585 1 NC_010002.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: ajs:Ajs_3251 response regulator receiver modulated diguanylate cyclase; response regulator receiver modulated diguanylate cyclase 5819585 5750862 Daci_5250 Delftia acidovorans SPH-1 response regulator receiver modulated diguanylate cyclase YP_001566264.1 5818503 D 398578 CDS YP_001566265.1 160900683 5750863 5819682..5820362 1 NC_010002.1 KEGG: aav:Aave_1202 small-conductance mechanosensitive channel-like protein; small-conductance mechanosensitive channel-like protein 5820362 5750863 Daci_5251 Delftia acidovorans SPH-1 small-conductance mechanosensitive channel-like protein YP_001566265.1 5819682 D 398578 CDS YP_001566266.1 160900684 5750864 complement(5820430..5821647) 1 NC_010002.1 non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis; phosphoribosylglycinamide formyltransferase 2 5821647 purT 5750864 purT Delftia acidovorans SPH-1 phosphoribosylglycinamide formyltransferase 2 YP_001566266.1 5820430 R 398578 CDS YP_001566267.1 160900685 5750865 complement(5821758..5822420) 1 NC_010002.1 KEGG: pol:Bpro_3938 hypothetical protein; hypothetical protein 5822420 5750865 Daci_5253 Delftia acidovorans SPH-1 hypothetical protein YP_001566267.1 5821758 R 398578 CDS YP_001566268.1 160900686 5750866 complement(5822439..5823098) 1 NC_010002.1 PFAM: Cold-shock protein DNA-binding; protein of unknown function DUF1294; SMART: Cold shock protein; KEGG: neu:NE0717 cold-shock DNA-binding domain; cold-shock DNA-binding domain-containing protein 5823098 5750866 Daci_5254 Delftia acidovorans SPH-1 cold-shock DNA-binding domain-containing protein YP_001566268.1 5822439 R 398578 CDS YP_001566269.1 160900687 5750867 complement(5823106..5824203) 1 NC_010002.1 PFAM: phosphofructokinase; KEGG: ajs:Ajs_3260 6-phosphofructokinase; 6-phosphofructokinase 5824203 5750867 Daci_5255 Delftia acidovorans SPH-1 6-phosphofructokinase YP_001566269.1 5823106 R 398578 CDS YP_001566270.1 160900688 5750868 complement(5824315..5825406) 1 NC_010002.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: ajs:Ajs_3261 beta-N-acetylhexosaminidase; beta-N-acetylhexosaminidase 5825406 5750868 Daci_5256 Delftia acidovorans SPH-1 beta-N-acetylhexosaminidase YP_001566270.1 5824315 R 398578 CDS YP_001566271.1 160900689 5750869 complement(5825466..5825861) 1 NC_010002.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 5825861 acpS 5750869 acpS Delftia acidovorans SPH-1 4'-phosphopantetheinyl transferase YP_001566271.1 5825466 R 398578 CDS YP_001566272.1 160900690 5750870 complement(5825882..5826655) 1 NC_010002.1 involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 5826655 5750870 Daci_5258 Delftia acidovorans SPH-1 pyridoxine 5'-phosphate synthase YP_001566272.1 5825882 R 398578 CDS YP_001566273.1 160900691 5750871 complement(5826652..5827422) 1 NC_010002.1 TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; KEGG: aav:Aave_1198 DNA repair protein RecO; DNA repair protein RecO 5827422 5750871 Daci_5259 Delftia acidovorans SPH-1 DNA repair protein RecO YP_001566273.1 5826652 R 398578 CDS YP_001566274.1 160900692 5750872 complement(5827450..5828484) 1 NC_010002.1 TIGRFAM: small GTP-binding protein; GTP-binding protein Era; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; Miro domain protein; KEGG: aav:Aave_1197 GTP-binding protein Era; GTP-binding protein Era 5828484 5750872 Daci_5260 Delftia acidovorans SPH-1 GTP-binding protein Era YP_001566274.1 5827450 R 398578 CDS YP_001566275.1 160900693 5750873 complement(5828481..5829164) 1 NC_010002.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 5829164 rnc 5750873 rnc Delftia acidovorans SPH-1 ribonuclease III YP_001566275.1 5828481 R 398578 CDS YP_001566276.1 160900694 5750874 complement(5829165..5829527) 1 NC_010002.1 KEGG: aav:Aave_1195 putative transmembrane protein; putative transmembrane protein 5829527 5750874 Daci_5262 Delftia acidovorans SPH-1 putative transmembrane protein YP_001566276.1 5829165 R 398578 CDS YP_001566277.1 160900695 5750875 complement(5829608..5830585) 1 NC_010002.1 KEGG: aav:Aave_1194 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; signal peptidase I 5830585 5750875 Daci_5263 Delftia acidovorans SPH-1 signal peptidase I YP_001566277.1 5829608 R 398578 CDS YP_001566278.1 160900696 5750876 complement(5830585..5832393) 1 NC_010002.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 5832393 5750876 Daci_5264 Delftia acidovorans SPH-1 GTP-binding protein LepA YP_001566278.1 5830585 R 398578 CDS YP_001566279.1 160900697 5750877 complement(5832822..5834318) 1 NC_010002.1 KEGG: aav:Aave_1192 protease Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do 5834318 5750877 Daci_5265 Delftia acidovorans SPH-1 protease Do YP_001566279.1 5832822 R 398578 CDS YP_001566280.1 160900698 5750878 complement(5834599..5835315) 1 NC_010002.1 PFAM: Anti sigma-E protein RseA family protein; KEGG: ajs:Ajs_3273 anti sigma-E protein, RseA; anti sigma-E protein RseA 5835315 5750878 Daci_5266 Delftia acidovorans SPH-1 anti sigma-E protein RseA YP_001566280.1 5834599 R 398578 CDS YP_001566281.1 160900699 5750879 complement(5835393..5836064) 1 NC_010002.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE 5836064 5750879 Daci_5267 Delftia acidovorans SPH-1 RNA polymerase sigma factor RpoE YP_001566281.1 5835393 R 398578 CDS YP_001566282.1 160900700 5750880 complement(5836668..5837912) 1 NC_010002.1 TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase; KEGG: ajs:Ajs_3276 beta-ketoacyl synthase; 3-oxoacyl-(acyl-carrier-protein) synthase 2 5837912 5750880 Daci_5268 Delftia acidovorans SPH-1 3-oxoacyl-(acyl-carrier-protein) synthase 2 YP_001566282.1 5836668 R 398578 CDS YP_001566283.1 160900701 5750881 complement(5837952..5838191) 1 NC_010002.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 5838191 acpP 5750881 acpP Delftia acidovorans SPH-1 acyl carrier protein YP_001566283.1 5837952 R 398578 CDS YP_001566284.1 160900702 5750882 complement(5838341..5839087) 1 NC_010002.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ajs:Ajs_3278 3-oxoacyl-(acyl-carrier-protein) reductase; 3-oxoacyl-(acyl-carrier-protein) reductase 5839087 5750882 Daci_5270 Delftia acidovorans SPH-1 3-oxoacyl-(acyl-carrier-protein) reductase YP_001566284.1 5838341 R 398578 CDS YP_001566285.1 160900703 5750883 complement(5839084..5840085) 1 NC_010002.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: ajs:Ajs_3279 malonyl CoA-acyl carrier protein transacylase; malonyl CoA-acyl carrier protein transacylase 5840085 5750883 Daci_5271 Delftia acidovorans SPH-1 malonyl CoA-acyl carrier protein transacylase YP_001566285.1 5839084 R 398578 CDS YP_001566286.1 160900704 5750884 complement(5840085..5841062) 1 NC_010002.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 5841062 5750884 Daci_5272 Delftia acidovorans SPH-1 3-oxoacyl-ACP synthase YP_001566286.1 5840085 R 398578 CDS YP_001566287.1 160900705 5750885 complement(5841068..5842108) 1 NC_010002.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; putative glycerol-3-phosphate acyltransferase PlsX 5842108 5750885 Daci_5273 Delftia acidovorans SPH-1 putative glycerol-3-phosphate acyltransferase PlsX YP_001566287.1 5841068 R 398578 CDS YP_001566288.1 160900706 5750886 complement(5842222..5842404) 1 NC_010002.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 5842404 rpmF 5750886 rpmF Delftia acidovorans SPH-1 50S ribosomal protein L32 YP_001566288.1 5842222 R 398578 CDS YP_001566289.1 160900707 5750887 complement(5842542..5843099) 1 NC_010002.1 PFAM: protein of unknown function DUF177; KEGG: ajs:Ajs_3283 protein of unknown function DUF177; hypothetical protein 5843099 5750887 Daci_5275 Delftia acidovorans SPH-1 hypothetical protein YP_001566289.1 5842542 R 398578 CDS YP_001566290.1 160900708 5750888 5843125..5843745 1 NC_010002.1 TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: ajs:Ajs_3284 maf protein; maf protein 5843745 5750888 Daci_5276 Delftia acidovorans SPH-1 maf protein YP_001566290.1 5843125 D 398578 CDS YP_001566291.1 160900709 5750889 5843742..5844533 1 NC_010002.1 KEGG: ajs:Ajs_3285 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase; uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase 5844533 5750889 Daci_5277 Delftia acidovorans SPH-1 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase YP_001566291.1 5843742 D 398578 CDS YP_001566292.1 160900710 5750890 complement(5844620..5845666) 1 NC_010002.1 PFAM: peptidase S49; KEGG: aav:Aave_1177 peptidase S49; peptidase S49 5845666 5750890 Daci_5278 Delftia acidovorans SPH-1 peptidase S49 YP_001566292.1 5844620 R 398578 CDS YP_001566293.1 160900711 5750891 complement(5845668..5846042) 1 NC_010002.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: aav:Aave_1176 Rieske (2Fe-2S) domain protein; Rieske (2Fe-2S) domain-containing protein 5846042 5750891 Daci_5279 Delftia acidovorans SPH-1 Rieske (2Fe-2S) domain-containing protein YP_001566293.1 5845668 R 398578 CDS YP_001566294.1 160900712 5750892 complement(5846086..5846772) 1 NC_010002.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ajs:Ajs_3288 HAD-superfamily hydrolase, subfamily IA, variant 1; HAD family hydrolase 5846772 5750892 Daci_5280 Delftia acidovorans SPH-1 HAD family hydrolase YP_001566294.1 5846086 R 398578 CDS YP_001566295.1 160900713 5750893 complement(5846797..5847885) 1 NC_010002.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: aav:Aave_1174 pseudouridine synthase, RluA family; RluA family pseudouridine synthase 5847885 5750893 Daci_5281 Delftia acidovorans SPH-1 RluA family pseudouridine synthase YP_001566295.1 5846797 R 398578 CDS YP_001566296.1 160900714 5750894 5848394..5851528 1 NC_010002.1 TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: ajs:Ajs_3290 ribonuclease, Rne/Rng family; ribonuclease 5851528 5750894 Daci_5282 Delftia acidovorans SPH-1 ribonuclease YP_001566296.1 5848394 D 398578 CDS YP_001566297.1 160900715 5750895 5851647..5852432 1 NC_010002.1 PFAM: protein of unknown function DUF328; KEGG: ajs:Ajs_3291 protein of unknown function DUF328; hypothetical protein 5852432 5750895 Daci_5283 Delftia acidovorans SPH-1 hypothetical protein YP_001566297.1 5851647 D 398578 CDS YP_001566298.1 160900716 5750896 5852513..5853397 1 NC_010002.1 KEGG: aav:Aave_1171 2OG-Fe(II) oxygenase; PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; procollagen-proline dioxygenase 5853397 5750896 Daci_5284 Delftia acidovorans SPH-1 procollagen-proline dioxygenase YP_001566298.1 5852513 D 398578 CDS YP_001566299.1 160900717 5750897 5853553..5854401 1 NC_010002.1 catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 5854401 queF 5750897 queF Delftia acidovorans SPH-1 7-cyano-7-deazaguanine reductase YP_001566299.1 5853553 D 398578 CDS YP_001566300.1 160900718 5750898 complement(5854425..5855984) 1 NC_010002.1 TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold domain protein; KEGG: ajs:Ajs_3295 methyl-accepting chemotaxis sensory transducer; Pas/Pac sensor-containing methyl-accepting chemotaxis sensory transducer 5855984 5750898 Daci_5286 Delftia acidovorans SPH-1 Pas/Pac sensor-containing methyl-accepting chemotaxis sensory transducer YP_001566300.1 5854425 R 398578 CDS YP_001566301.1 160900719 5750899 complement(5856176..5857489) 1 NC_010002.1 PFAM: UMUC domain protein DNA-repair protein; KEGG: aav:Aave_1964 DNA-directed DNA polymerase; DNA-directed DNA polymerase 5857489 5750899 Daci_5287 Delftia acidovorans SPH-1 DNA-directed DNA polymerase YP_001566301.1 5856176 R 398578 CDS YP_001566302.1 160900720 5750900 complement(5857532..5858530) 1 NC_010002.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ajs:Ajs_3297 hypothetical protein; hypothetical protein 5858530 5750900 Daci_5288 Delftia acidovorans SPH-1 hypothetical protein YP_001566302.1 5857532 R 398578 CDS YP_001566303.1 160900721 5750901 complement(5858703..5859530) 1 NC_010002.1 KEGG: pna:Pnap_1085 putative transmembrane protein; putative transmembrane protein 5859530 5750901 Daci_5289 Delftia acidovorans SPH-1 putative transmembrane protein YP_001566303.1 5858703 R 398578 CDS YP_001566304.1 160900722 5750902 complement(5859568..5860152) 1 NC_010002.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: pna:Pnap_1084 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 5860152 5750902 Daci_5290 Delftia acidovorans SPH-1 ECF subfamily RNA polymerase sigma-24 factor YP_001566304.1 5859568 R 398578 CDS YP_001566305.1 160900723 5750903 5860297..5861013 1 NC_010002.1 KEGG: aav:Aave_1961 hypothetical protein; hypothetical protein 5861013 5750903 Daci_5291 Delftia acidovorans SPH-1 hypothetical protein YP_001566305.1 5860297 D 398578 CDS YP_001566306.1 160900724 5750904 complement(5861029..5861961) 1 NC_010002.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pfl:PFL_4124 transcriptional regulator, AraC family; AraC family transcriptional regulator 5861961 5750904 Daci_5292 Delftia acidovorans SPH-1 AraC family transcriptional regulator YP_001566306.1 5861029 R 398578 CDS YP_001566307.1 160900725 5750905 5862195..5863895 1 NC_010002.1 PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: pfl:PFL_4123 2-isopropylmalate synthase; 2-isopropylmalate synthase 5863895 5750905 Daci_5293 Delftia acidovorans SPH-1 2-isopropylmalate synthase YP_001566307.1 5862195 D 398578 CDS YP_001566308.1 160900726 5750906 complement(5863959..5865134) 1 NC_010002.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: vei:Veis_3178 L-lactate dehydrogenase (cytochrome); L-lactate dehydrogenase 5865134 5750906 Daci_5294 Delftia acidovorans SPH-1 L-lactate dehydrogenase YP_001566308.1 5863959 R 398578 CDS YP_001566309.1 160900727 5750907 5865354..5867012 1 NC_010002.1 TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: ajs:Ajs_4067 L-lactate transport; L-lactate transport 5867012 5750907 Daci_5295 Delftia acidovorans SPH-1 L-lactate transport YP_001566309.1 5865354 D 398578 CDS YP_001566310.1 160900728 5750908 5867168..5868181 1 NC_010002.1 PFAM: GCN5-related N-acetyltransferase; regulatory protein MarR; KEGG: kpn:KPN_01851 putative bacterial regulatory protein, MarR; MarR family transcriptional regulator 5868181 5750908 Daci_5296 Delftia acidovorans SPH-1 MarR family transcriptional regulator YP_001566310.1 5867168 D 398578 CDS YP_001566311.1 160900729 5750909 complement(5868183..5868734) 1 NC_010002.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: vei:Veis_4799 cupin 2, conserved barrel domain protein; cupin 5868734 5750909 Daci_5297 Delftia acidovorans SPH-1 cupin YP_001566311.1 5868183 R 398578 CDS YP_001566312.1 160900730 5750910 complement(5868760..5869704) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: vei:Veis_4798 uncharacterized protein UPF0065; hypothetical protein 5869704 5750910 Daci_5298 Delftia acidovorans SPH-1 hypothetical protein YP_001566312.1 5868760 R 398578 CDS YP_001566313.1 160900731 5750911 5869833..5870516 1 NC_010002.1 PFAM: regulatory protein TetR; KEGG: bxe:Bxe_C0212 transcriptional regulator, TetR family; TetR family transcriptional regulator 5870516 5750911 Daci_5299 Delftia acidovorans SPH-1 TetR family transcriptional regulator YP_001566313.1 5869833 D 398578 CDS YP_001566314.1 160900732 5750912 complement(5870534..5872858) 1 NC_010002.1 TIGRFAM: penicillin-binding protein 1C; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: ajs:Ajs_3299 penicillin-binding protein 1C; penicillin-binding protein 1C 5872858 5750912 Daci_5300 Delftia acidovorans SPH-1 penicillin-binding protein 1C YP_001566314.1 5870534 R 398578 CDS YP_001566315.1 160900733 5750913 complement(5872892..5873452) 1 NC_010002.1 KEGG: net:Neut_2430 hypothetical protein; hypothetical protein 5873452 5750913 Daci_5301 Delftia acidovorans SPH-1 hypothetical protein YP_001566315.1 5872892 R 398578 CDS YP_001566316.1 160900734 5750914 complement(5873547..5874416) 1 NC_010002.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: ajs:Ajs_3303 endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase 5874416 5750914 Daci_5302 Delftia acidovorans SPH-1 endonuclease/exonuclease/phosphatase YP_001566316.1 5873547 R 398578 CDS YP_001566317.1 160900735 5750915 complement(5874413..5874802) 1 NC_010002.1 KEGG: xcb:XC_0339 hypothetical protein; hypothetical protein 5874802 5750915 Daci_5303 Delftia acidovorans SPH-1 hypothetical protein YP_001566317.1 5874413 R 398578 CDS YP_001566318.1 160900736 5750916 complement(5874851..5875699) 1 NC_010002.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_3304 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 5875699 5750916 Daci_5304 Delftia acidovorans SPH-1 binding-protein-dependent transport system inner membrane protein YP_001566318.1 5874851 R 398578 CDS YP_001566319.1 160900737 5750917 complement(5875696..5876592) 1 NC_010002.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_3305 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 5876592 5750917 Daci_5305 Delftia acidovorans SPH-1 binding-protein-dependent transport system inner membrane protein YP_001566319.1 5875696 R 398578 CDS YP_001566320.1 160900738 5750918 complement(5876614..5877909) 1 NC_010002.1 PFAM: extracellular solute-binding protein family 1; KEGG: ajs:Ajs_3306 extracellular solute-binding protein, family 1; extracellular solute-binding protein 5877909 5750918 Daci_5306 Delftia acidovorans SPH-1 extracellular solute-binding protein YP_001566320.1 5876614 R 398578 CDS YP_001566321.1 160900739 5750919 complement(5878001..5879068) 1 NC_010002.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ajs:Ajs_3307 ABC transporter related; ABC transporter-like protein 5879068 5750919 Daci_5307 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001566321.1 5878001 R 398578 CDS YP_001566322.1 160900740 5750920 complement(5879135..5880535) 1 NC_010002.1 PFAM: Amidase; KEGG: bra:BRADO4407 putative amidase; amidase 5880535 5750920 Daci_5308 Delftia acidovorans SPH-1 amidase YP_001566322.1 5879135 R 398578 CDS YP_001566323.1 160900741 5750921 complement(5880667..5881611) 1 NC_010002.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: ppf:Pput_2723 helix-turn-helix-domain containing protein, AraC type; AraC family transcriptional regulator 5881611 5750921 Daci_5309 Delftia acidovorans SPH-1 AraC family transcriptional regulator YP_001566323.1 5880667 R 398578 CDS YP_001566324.1 160900742 5750922 complement(5881707..5883803) 1 NC_010002.1 TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: ajs:Ajs_3308 choline/carnitine/betaine transporter; choline/carnitine/betaine transporter 5883803 5750922 Daci_5310 Delftia acidovorans SPH-1 choline/carnitine/betaine transporter YP_001566324.1 5881707 R 398578 CDS YP_001566325.1 160900743 5750923 complement(5884023..5884550) 1 NC_010002.1 KEGG: azo:azo2571 hypothetical protein; hypothetical protein 5884550 5750923 Daci_5311 Delftia acidovorans SPH-1 hypothetical protein YP_001566325.1 5884023 R 398578 CDS YP_001566326.1 160900744 5750924 complement(5884639..5890623) 1 NC_010002.1 PFAM: alpha-2-macroglobulin domain protein; KEGG: aav:Aave_1953 alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain-containing protein 5890623 5750924 Daci_5312 Delftia acidovorans SPH-1 alpha-2-macroglobulin domain-containing protein YP_001566326.1 5884639 R 398578 CDS YP_001566327.1 160900745 5750925 5891122..5892447 1 NC_010002.1 KEGG: hch:HCH_02671 hypothetical protein; hypothetical protein 5892447 5750925 Daci_5313 Delftia acidovorans SPH-1 hypothetical protein YP_001566327.1 5891122 D 398578 CDS YP_001566328.1 160900746 5750926 complement(5892448..5893938) 1 NC_010002.1 PFAM: Rhomboid family protein; KEGG: xcv:XCV2885 putative rhomboid family membrane protein; rhomboid family protein 5893938 5750926 Daci_5314 Delftia acidovorans SPH-1 rhomboid family protein YP_001566328.1 5892448 R 398578 CDS YP_001566329.1 160900747 5750927 complement(5893960..5894958) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_3311 uncharacterized protein UPF0065; hypothetical protein 5894958 5750927 Daci_5315 Delftia acidovorans SPH-1 hypothetical protein YP_001566329.1 5893960 R 398578 CDS YP_001566330.1 160900748 5750928 complement(5894983..5896464) 1 NC_010002.1 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 5896464 5750928 Daci_5316 Delftia acidovorans SPH-1 argininosuccinate lyase YP_001566330.1 5894983 R 398578 CDS YP_001566331.1 160900749 5750929 5896728..5897822 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase internal region; KEGG: vei:Veis_1353 histidine kinase internal region; histidine kinase internal region 5897822 5750929 Daci_5317 Delftia acidovorans SPH-1 histidine kinase internal region YP_001566331.1 5896728 D 398578 CDS YP_001566332.1 160900750 5750930 5897803..5898564 1 NC_010002.1 PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: aav:Aave_1947 response regulator receiver protein; LytTR family two component transcriptional regulator 5898564 5750930 Daci_5318 Delftia acidovorans SPH-1 LytTR family two component transcriptional regulator YP_001566332.1 5897803 D 398578 CDS YP_001566333.1 160900751 5750931 complement(5898735..5900222) 1 NC_010002.1 PFAM: aminotransferase class V; KEGG: aav:Aave_1124 aminotransferase, class V; class V aminotransferase 5900222 5750931 Daci_5319 Delftia acidovorans SPH-1 class V aminotransferase YP_001566333.1 5898735 R 398578 CDS YP_001566334.1 160900752 5750932 complement(5900250..5900720) 1 NC_010002.1 TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: aav:Aave_1123 putative endoribonuclease L-PSP; endoribonuclease L-PSP 5900720 5750932 Daci_5320 Delftia acidovorans SPH-1 endoribonuclease L-PSP YP_001566334.1 5900250 R 398578 CDS YP_001566335.1 160900753 5750933 5901367..5902779 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; Cache type 2 domain protein; KEGG: aav:Aave_1122 histidine kinase; histidine kinase 5902779 5750933 Daci_5321 Delftia acidovorans SPH-1 histidine kinase YP_001566335.1 5901367 D 398578 CDS YP_001566336.1 160900754 5750934 5902776..5903438 1 NC_010002.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: aav:Aave_1121 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 5903438 5750934 Daci_5322 Delftia acidovorans SPH-1 two component LuxR family transcriptional regulator YP_001566336.1 5902776 D 398578 CDS YP_001566337.1 160900755 5750935 complement(5903467..5904300) 1 NC_010002.1 PFAM: zinc/iron permease; KEGG: aav:Aave_1944 zinc/iron permease; zinc/iron permease 5904300 5750935 Daci_5323 Delftia acidovorans SPH-1 zinc/iron permease YP_001566337.1 5903467 R 398578 CDS YP_001566338.1 160900756 5750936 complement(5904473..5905369) 1 NC_010002.1 PFAM: dienelactone hydrolase; KEGG: ajs:Ajs_3316 carboxymethylenebutenolidase; carboxymethylenebutenolidase 5905369 5750936 Daci_5324 Delftia acidovorans SPH-1 carboxymethylenebutenolidase YP_001566338.1 5904473 R 398578 CDS YP_001566339.1 160900757 5750937 complement(5905427..5908270) 1 NC_010002.1 KEGG: aav:Aave_1930 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: Helix-hairpin-helix domain protein class 2; DNA polymerase I 5908270 5750937 Daci_5325 Delftia acidovorans SPH-1 DNA polymerase I YP_001566339.1 5905427 R 398578 CDS YP_001566340.1 160900758 5750938 5908343..5908714 1 NC_010002.1 KEGG: aav:Aave_1929 hypothetical protein; hypothetical protein 5908714 5750938 Daci_5326 Delftia acidovorans SPH-1 hypothetical protein YP_001566340.1 5908343 D 398578 CDS YP_001566341.1 160900759 5750939 5908839..5909795 1 NC_010002.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine; homoserine kinase 5909795 5750939 Daci_5327 Delftia acidovorans SPH-1 homoserine kinase YP_001566341.1 5908839 D 398578 CDS YP_001566342.1 160900760 5750940 5909942..5910775 1 NC_010002.1 KEGG: ajs:Ajs_3321 hypothetical protein; hypothetical protein 5910775 5750940 Daci_5328 Delftia acidovorans SPH-1 hypothetical protein YP_001566342.1 5909942 D 398578 CDS YP_001566343.1 160900761 5750941 5911070..5913022 1 NC_010002.1 KEGG: aav:Aave_1926 putative exported alkaline phosphatase; putative exported alkaline phosphatase 5913022 5750941 Daci_5329 Delftia acidovorans SPH-1 putative exported alkaline phosphatase YP_001566343.1 5911070 D 398578 CDS YP_001566344.1 160900762 5750942 5913298..5913930 1 NC_010002.1 KEGG: mms:mma_3481 hypothetical protein; hypothetical protein 5913930 5750942 Daci_5330 Delftia acidovorans SPH-1 hypothetical protein YP_001566344.1 5913298 D 398578 CDS YP_001566345.1 160900763 5750943 complement(5913955..5916423) 1 NC_010002.1 PFAM: UvrD/REP helicase; KEGG: aav:Aave_1916 UvrD/REP helicase; UvrD/REP helicase 5916423 5750943 Daci_5331 Delftia acidovorans SPH-1 UvrD/REP helicase YP_001566345.1 5913955 R 398578 CDS YP_001566346.1 160900764 5750944 5916754..5917731 1 NC_010002.1 TIGRFAM: guanosine monophosphate reductase; PFAM: IMP dehydrogenase/GMP reductase; KEGG: ajs:Ajs_3326 guanosine monophosphate reductase; guanosine 5'-monophosphate oxidoreductase 5917731 5750944 Daci_5332 Delftia acidovorans SPH-1 guanosine 5'-monophosphate oxidoreductase YP_001566346.1 5916754 D 398578 CDS YP_001566347.1 160900765 5750948 complement(5918281..5919279) 1 NC_010002.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: reh:H16_A1508 TRAP-type transporter, periplasmic component; TRAP dicarboxylate transporter subunit DctP 5919279 5750948 Daci_5333 Delftia acidovorans SPH-1 TRAP dicarboxylate transporter subunit DctP YP_001566347.1 5918281 R 398578 CDS YP_001566348.1 160900766 5750949 5919546..5920778 1 NC_010002.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: aav:Aave_1896 drug resistance transporter, Bcr/CflA subfamily; Bcr/CflA subfamily drug resistance transporter 5920778 5750949 Daci_5334 Delftia acidovorans SPH-1 Bcr/CflA subfamily drug resistance transporter YP_001566348.1 5919546 D 398578 CDS YP_001566349.1 160900767 5750950 complement(5920801..5922270) 1 NC_010002.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: aav:Aave_1895 diguanylate cyclase; diguanylate cyclase 5922270 5750950 Daci_5335 Delftia acidovorans SPH-1 diguanylate cyclase YP_001566349.1 5920801 R 398578 CDS YP_001566350.1 160900768 5750951 complement(5922422..5924545) 1 NC_010002.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: aav:Aave_1894 DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase 5924545 5750951 Daci_5336 Delftia acidovorans SPH-1 DEAD/DEAH box helicase YP_001566350.1 5922422 R 398578 CDS YP_001566351.1 160900769 5750952 5924720..5926747 1 NC_010002.1 PFAM: peptidase M48 Ste24p; KEGG: aav:Aave_1892 STE24 endopeptidase; Ste24 endopeptidase 5926747 5750952 Daci_5337 Delftia acidovorans SPH-1 Ste24 endopeptidase YP_001566351.1 5924720 D 398578 CDS YP_001566352.1 160900770 5750953 5926779..5927096 1 NC_010002.1 PFAM: transcriptional coactivator/pterin dehydratase; KEGG: ajs:Ajs_3348 transcriptional coactivator/pterin dehydratase; transcriptional coactivator/pterin dehydratase 5927096 5750953 Daci_5338 Delftia acidovorans SPH-1 transcriptional coactivator/pterin dehydratase YP_001566352.1 5926779 D 398578 CDS YP_001566353.1 160900771 5750954 5927115..5928083 1 NC_010002.1 TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; KEGG: ajs:Ajs_3349 ribosome small subunit-dependent GTPase A; ribosome small subunit-dependent GTPase A 5928083 5750954 Daci_5339 Delftia acidovorans SPH-1 ribosome small subunit-dependent GTPase A YP_001566353.1 5927115 D 398578 CDS YP_001566354.1 160900772 5750955 complement(5928172..5929182) 1 NC_010002.1 PFAM: cobalamin biosynthesis protein CbiB; KEGG: vei:Veis_0320 cobalamin biosynthesis protein CbiB; cobalamin biosynthesis protein CbiB 5929182 5750955 Daci_5340 Delftia acidovorans SPH-1 cobalamin biosynthesis protein CbiB YP_001566354.1 5928172 R 398578 CDS YP_001566355.1 160900773 5750956 complement(5929230..5929958) 1 NC_010002.1 PFAM: NUDIX hydrolase; KEGG: ajs:Ajs_3351 NUDIX hydrolase; NUDIX hydrolase 5929958 5750956 Daci_5341 Delftia acidovorans SPH-1 NUDIX hydrolase YP_001566355.1 5929230 R 398578 CDS YP_001566356.1 160900774 5750957 complement(5930046..5930486) 1 NC_010002.1 PFAM: ribosomal protein L19; KEGG: ajs:Ajs_3352 ribosomal protein L19; 50S ribosomal protein L19 5930486 5750957 Daci_5342 Delftia acidovorans SPH-1 50S ribosomal protein L19 YP_001566356.1 5930046 R 398578 CDS YP_001566357.1 160900775 5750958 complement(5930537..5931307) 1 NC_010002.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 5931307 trmD 5750958 trmD Delftia acidovorans SPH-1 tRNA (guanine-N(1)-)-methyltransferase YP_001566357.1 5930537 R 398578 CDS YP_001566358.1 160900776 5750959 complement(5931320..5931889) 1 NC_010002.1 Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 5931889 rimM 5750959 rimM Delftia acidovorans SPH-1 16S rRNA-processing protein RimM YP_001566358.1 5931320 R 398578 CDS YP_001566359.1 160900777 5750960 complement(5932022..5932276) 1 NC_010002.1 PFAM: ribosomal protein S16; KEGG: ajs:Ajs_3355 ribosomal protein S16; 30S ribosomal protein S16 5932276 5750960 Daci_5345 Delftia acidovorans SPH-1 30S ribosomal protein S16 YP_001566359.1 5932022 R 398578 CDS YP_001566360.1 160900778 5750961 5932423..5932947 1 NC_010002.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ajs:Ajs_3356 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 5932947 5750961 Daci_5346 Delftia acidovorans SPH-1 N-acetyltransferase GCN5 YP_001566360.1 5932423 D 398578 CDS YP_001566361.1 160900779 5750962 5932955..5933461 1 NC_010002.1 KEGG: aav:Aave_1882 hypothetical protein; hypothetical protein 5933461 5750962 Daci_5347 Delftia acidovorans SPH-1 hypothetical protein YP_001566361.1 5932955 D 398578 CDS YP_001566362.1 160900780 5750963 complement(5933529..5934539) 1 NC_010002.1 PFAM: phosphate transporter; KEGG: ajs:Ajs_3358 phosphate transporter; phosphate transporter 5934539 5750963 Daci_5348 Delftia acidovorans SPH-1 phosphate transporter YP_001566362.1 5933529 R 398578 CDS YP_001566363.1 160900781 5750964 complement(5934562..5935209) 1 NC_010002.1 PFAM: protein of unknown function DUF47; KEGG: aav:Aave_1880 protein of unknown function DUF47; hypothetical protein 5935209 5750964 Daci_5349 Delftia acidovorans SPH-1 hypothetical protein YP_001566363.1 5934562 R 398578 CDS YP_001566364.1 160900782 5750965 complement(5935352..5935714) 1 NC_010002.1 PFAM: protein of unknown function DUF486; KEGG: ajs:Ajs_3360 protein of unknown function DUF486; hypothetical protein 5935714 5750965 Daci_5350 Delftia acidovorans SPH-1 hypothetical protein YP_001566364.1 5935352 R 398578 CDS YP_001566365.1 160900783 5750966 complement(5935967..5936713) 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_1878 ABC transporter-related protein; ABC transporter-like protein 5936713 5750966 Daci_5351 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001566365.1 5935967 R 398578 CDS YP_001566366.1 160900784 5750967 complement(5936717..5937511) 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_1877 ABC transporter-related protein; ABC transporter-like protein 5937511 5750967 Daci_5352 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001566366.1 5936717 R 398578 CDS YP_001566367.1 160900785 5750968 complement(5937529..5938608) 1 NC_010002.1 PFAM: inner-membrane translocator; KEGG: ajs:Ajs_3363 inner-membrane translocator; inner-membrane translocator 5938608 5750968 Daci_5353 Delftia acidovorans SPH-1 inner-membrane translocator YP_001566367.1 5937529 R 398578 CDS YP_001566368.1 160900786 5750969 complement(5938619..5939548) 1 NC_010002.1 PFAM: inner-membrane translocator; KEGG: aav:Aave_1875 inner-membrane translocator; inner-membrane translocator 5939548 5750969 Daci_5354 Delftia acidovorans SPH-1 inner-membrane translocator YP_001566368.1 5938619 R 398578 CDS YP_001566369.1 160900787 5750970 5939854..5940201 1 NC_010002.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: bbr:BB2410 hypothetical protein; glutathione-dependent formaldehyde-activating protein 5940201 5750970 Daci_5355 Delftia acidovorans SPH-1 glutathione-dependent formaldehyde-activating protein YP_001566369.1 5939854 D 398578 CDS YP_001566370.1 160900788 5750971 complement(5940210..5940815) 1 NC_010002.1 PFAM: DSBA oxidoreductase; KEGG: reu:Reut_C6061 DsbA oxidoreductase; DSBA oxidoreductase 5940815 5750971 Daci_5356 Delftia acidovorans SPH-1 DSBA oxidoreductase YP_001566370.1 5940210 R 398578 CDS YP_001566371.1 160900789 5750972 complement(5940896..5941624) 1 NC_010002.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rme:Rmet_4197 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 5941624 5750972 Daci_5357 Delftia acidovorans SPH-1 short-chain dehydrogenase/reductase SDR YP_001566371.1 5940896 R 398578 CDS YP_001566372.1 160900790 5750973 5941715..5942164 1 NC_010002.1 PFAM: helix-turn-helix HxlR type; KEGG: bbt:BBta_5152 hypothetical protein; HxlR family transcriptional regulator 5942164 5750973 Daci_5358 Delftia acidovorans SPH-1 HxlR family transcriptional regulator YP_001566372.1 5941715 D 398578 CDS YP_001566373.1 160900791 5750974 complement(5942197..5943501) 1 NC_010002.1 PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: mms:mma_1156 hypothetical protein; recombination factor protein RarA 5943501 5750974 Daci_5359 Delftia acidovorans SPH-1 recombination factor protein RarA YP_001566373.1 5942197 R 398578 CDS YP_001566374.1 160900792 5750975 5943945..5945258 1 NC_010002.1 PFAM: branched-chain amino acid transport system II carrier protein; KEGG: pap:PSPA7_3684 branched-chain amino acid transport system II carrier protein; branched-chain amino acid transport system II carrier protein 5945258 5750975 Daci_5360 Delftia acidovorans SPH-1 branched-chain amino acid transport system II carrier protein YP_001566374.1 5943945 D 398578 CDS YP_001566375.1 160900793 5750976 complement(5945245..5946771) 1 NC_010002.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bur:Bcep18194_A4084 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 5946771 5750976 Daci_5361 Delftia acidovorans SPH-1 methyl-accepting chemotaxis sensory transducer YP_001566375.1 5945245 R 398578 CDS YP_001566376.1 160900794 5750977 complement(5946940..5947575) 1 NC_010002.1 PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: ajs:Ajs_3381 outer membrane lipoprotein carrier protein LolA; outer membrane lipoprotein carrier protein LolA 5947575 5750977 Daci_5362 Delftia acidovorans SPH-1 outer membrane lipoprotein carrier protein LolA YP_001566376.1 5946940 R 398578 CDS YP_001566377.1 160900795 5750978 complement(5947605..5949968) 1 NC_010002.1 PFAM: cell divisionFtsK/SpoIIIE; KEGG: ajs:Ajs_3382 cell divisionFtsK/SpoIIIE; cell division protein FtsK 5949968 5750978 Daci_5363 Delftia acidovorans SPH-1 cell division protein FtsK YP_001566377.1 5947605 R 398578 CDS YP_001566378.1 160900796 5750979 5950171..5951184 1 NC_010002.1 TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ajs:Ajs_3383 thioredoxin reductase; thioredoxin reductase 5951184 5750979 Daci_5364 Delftia acidovorans SPH-1 thioredoxin reductase YP_001566378.1 5950171 D 398578 CDS YP_001566379.1 160900797 5750980 5951453..5951686 1 NC_010002.1 required for 70S ribosome assembly; 50S ribosomal protein L28 5951686 rpmB 5750980 rpmB Delftia acidovorans SPH-1 50S ribosomal protein L28 YP_001566379.1 5951453 D 398578 CDS YP_001566380.1 160900798 5750981 5951707..5951877 1 NC_010002.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 5951877 rpmG 5750981 rpmG Delftia acidovorans SPH-1 50S ribosomal protein L33 YP_001566380.1 5951707 D 398578 CDS YP_001566381.1 160900799 5750982 complement(5951998..5953482) 1 NC_010002.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: aav:Aave_3430 transcriptional regulator, GntR family; transcriptional regulator 5953482 5750982 Daci_5367 Delftia acidovorans SPH-1 transcriptional regulator YP_001566381.1 5951998 R 398578 CDS YP_001566382.1 160900800 5750983 5953518..5954063 1 NC_010002.1 hypothetical protein 5954063 5750983 Daci_5368 Delftia acidovorans SPH-1 hypothetical protein YP_001566382.1 5953518 D 398578 CDS YP_001566383.1 160900801 5750984 complement(5954038..5955261) 1 NC_010002.1 PFAM: fatty acid desaturase; KEGG: ajs:Ajs_3386 fatty acid desaturase; fatty acid desaturase 5955261 5750984 Daci_5369 Delftia acidovorans SPH-1 fatty acid desaturase YP_001566383.1 5954038 R 398578 CDS YP_001566384.1 160900802 5750985 complement(5955377..5956789) 1 NC_010002.1 PFAM: Fmu (Sun) domain protein; KEGG: aav:Aave_3433 Fmu (Sun) domain protein; Fmu (Sun) domain-containing protein 5956789 5750985 Daci_5370 Delftia acidovorans SPH-1 Fmu (Sun) domain-containing protein YP_001566384.1 5955377 R 398578 CDS YP_001566385.1 160900803 5750986 5956798..5957070 1 NC_010002.1 PFAM: protein of unknown function DUF1653; KEGG: ajs:Ajs_3389 protein of unknown function DUF1653; hypothetical protein 5957070 5750986 Daci_5371 Delftia acidovorans SPH-1 hypothetical protein YP_001566385.1 5956798 D 398578 CDS YP_001566386.1 160900804 5750987 complement(5957078..5957656) 1 NC_010002.1 glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; phosphoribosylglycinamide formyltransferase 5957656 purN 5750987 purN Delftia acidovorans SPH-1 phosphoribosylglycinamide formyltransferase YP_001566386.1 5957078 R 398578 CDS YP_001566387.1 160900805 5750988 5957713..5958435 1 NC_010002.1 PFAM: protein of unknown function DUF480; KEGG: aav:Aave_3438 protein of unknown function DUF480; hypothetical protein 5958435 5750988 Daci_5373 Delftia acidovorans SPH-1 hypothetical protein YP_001566387.1 5957713 D 398578 CDS YP_001566388.1 160900806 5750989 5958589..5959770 1 NC_010002.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: pna:Pnap_3224 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 5959770 5750989 Daci_5374 Delftia acidovorans SPH-1 acyl-CoA dehydrogenase domain-containing protein YP_001566388.1 5958589 D 398578 CDS YP_001566389.1 160900807 5750990 5959840..5960955 1 NC_010002.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: aav:Aave_3440 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 5960955 5750990 Daci_5375 Delftia acidovorans SPH-1 acyl-CoA dehydrogenase domain-containing protein YP_001566389.1 5959840 D 398578 CDS YP_001566390.1 160900808 5750991 complement(5961046..5961993) 1 NC_010002.1 PFAM: protein of unknown function UPF0187; KEGG: pna:Pnap_3226 protein of unknown function UPF0187; hypothetical protein 5961993 5750991 Daci_5376 Delftia acidovorans SPH-1 hypothetical protein YP_001566390.1 5961046 R 398578 CDS YP_001566391.1 160900809 5750992 complement(5962116..5963858) 1 NC_010002.1 KEGG: aav:Aave_4277 conserved repeat domain; hypothetical protein 5963858 5750992 Daci_5377 Delftia acidovorans SPH-1 hypothetical protein YP_001566391.1 5962116 R 398578 CDS YP_001566392.1 160900810 5750993 complement(5964030..5964731) 1 NC_010002.1 PFAM: response regulator receiver; KEGG: mfa:Mfla_2394 two component transcriptional regulator, winged helix family; response regulator receiver protein 5964731 5750993 Daci_5378 Delftia acidovorans SPH-1 response regulator receiver protein YP_001566392.1 5964030 R 398578 CDS YP_001566393.1 160900811 5750994 5964783..5966879 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Diverse 7TM receptor extracellular region 2; KEGG: kpn:KPN_02522 putative signal transduction histidine kinase; histidine kinase 5966879 5750994 Daci_5379 Delftia acidovorans SPH-1 histidine kinase YP_001566393.1 5964783 D 398578 CDS YP_001566394.1 160900812 5750995 5966867..5968936 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Diverse 7TM receptor extracellular region 2; KEGG: kpn:KPN_02522 putative signal transduction histidine kinase; histidine kinase 5968936 5750995 Daci_5380 Delftia acidovorans SPH-1 histidine kinase YP_001566394.1 5966867 D 398578 CDS YP_001566395.1 160900813 5750996 5969050..5970366 1 NC_010002.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; Methyltransferase type 11; Methyltransferase type 12; SMART: Tetratricopeptide domain protein; KEGG: aav:Aave_3443 methyltransferase type 12; type 11 methyltransferase 5970366 5750996 Daci_5381 Delftia acidovorans SPH-1 type 11 methyltransferase YP_001566395.1 5969050 D 398578 CDS YP_001566396.1 160900814 5750997 complement(5970377..5970985) 1 NC_010002.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: vei:Veis_2107 HNH endonuclease; HNH endonuclease 5970985 5750997 Daci_5382 Delftia acidovorans SPH-1 HNH endonuclease YP_001566396.1 5970377 R 398578 CDS YP_001566397.1 160900815 5750998 5971143..5972192 1 NC_010002.1 catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase 5972192 5750998 Daci_5383 Delftia acidovorans SPH-1 bifunctional riboflavin kinase/FMN adenylyltransferase YP_001566397.1 5971143 D 398578 CDS YP_001566398.1 160900816 5750999 5972298..5975153 1 NC_010002.1 TIGRFAM: isoleucyl-tRNA synthetase; KEGG: ajs:Ajs_3399 isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase 5975153 5750999 Daci_5384 Delftia acidovorans SPH-1 isoleucyl-tRNA synthetase YP_001566398.1 5972298 D 398578 CDS YP_001566399.1 160900817 5751000 5975174..5975689 1 NC_010002.1 KEGG: ajs:Ajs_3400 lipoprotein signal peptidase; TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II; lipoprotein signal peptidase 5975689 5751000 Daci_5385 Delftia acidovorans SPH-1 lipoprotein signal peptidase YP_001566399.1 5975174 D 398578 CDS YP_001566400.1 160900818 5751001 5975879..5977612 1 NC_010002.1 TIGRFAM: Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; KEGG: aav:Aave_3461 Na/Pi-cotransporter II-related protein; Na/Pi-cotransporter II-like protein 5977612 5751001 Daci_5386 Delftia acidovorans SPH-1 Na/Pi-cotransporter II-like protein YP_001566400.1 5975879 D 398578 CDS YP_001566401.1 160900819 5751002 complement(5977619..5978470) 1 NC_010002.1 PFAM: NUDIX hydrolase; KEGG: aav:Aave_3467 NUDIX hydrolase; NUDIX hydrolase 5978470 5751002 Daci_5387 Delftia acidovorans SPH-1 NUDIX hydrolase YP_001566401.1 5977619 R 398578 CDS YP_001566402.1 160900820 5751003 complement(5978467..5979447) 1 NC_010002.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: aav:Aave_3468 alcohol dehydrogenase, zinc-binding domain protein; alcohol dehydrogenase 5979447 5751003 Daci_5388 Delftia acidovorans SPH-1 alcohol dehydrogenase YP_001566402.1 5978467 R 398578 CDS YP_001566403.1 160900821 5751004 5979584..5980486 1 NC_010002.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: aav:Aave_3469 protein of unknown function DUF6, transmembrane; hypothetical protein 5980486 5751004 Daci_5389 Delftia acidovorans SPH-1 hypothetical protein YP_001566403.1 5979584 D 398578 CDS YP_001566404.1 160900822 5751005 complement(5980461..5983211) 1 NC_010002.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; KEGG: aav:Aave_3487 diguanylate cyclase/phosphodiesterase; diguanylate cyclase/phosphodiesterase 5983211 5751005 Daci_5390 Delftia acidovorans SPH-1 diguanylate cyclase/phosphodiesterase YP_001566404.1 5980461 R 398578 CDS YP_001566405.1 160900823 5751006 complement(5983398..5984195) 1 NC_010002.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: aav:Aave_1080 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 5984195 5751006 Daci_5391 Delftia acidovorans SPH-1 short-chain dehydrogenase/reductase SDR YP_001566405.1 5983398 R 398578 CDS YP_001566406.1 160900824 5751007 complement(5984353..5985669) 1 NC_010002.1 KEGG: pol:Bpro_3879 hypothetical protein; hypothetical protein 5985669 5751007 Daci_5392 Delftia acidovorans SPH-1 hypothetical protein YP_001566406.1 5984353 R 398578 CDS YP_001566407.1 160900825 5751008 complement(5985822..5987333) 1 NC_010002.1 PFAM: protein of unknown function DUF112 transmembrane; KEGG: aav:Aave_1070 protein of unknown function DUF112, transmembrane; hypothetical protein 5987333 5751008 Daci_5393 Delftia acidovorans SPH-1 hypothetical protein YP_001566407.1 5985822 R 398578 CDS YP_001566408.1 160900826 5751009 complement(5987349..5987837) 1 NC_010002.1 PFAM: protein of unknown function DUF1468; KEGG: aav:Aave_1069 protein of unknown function DUF1468; hypothetical protein 5987837 5751009 Daci_5394 Delftia acidovorans SPH-1 hypothetical protein YP_001566408.1 5987349 R 398578 CDS YP_001566409.1 160900827 5751010 complement(5988045..5989847) 1 NC_010002.1 PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; KEGG: aav:Aave_1068 type II secretion system protein E; type II secretion system protein E 5989847 5751010 Daci_5395 Delftia acidovorans SPH-1 type II secretion system protein E YP_001566409.1 5988045 R 398578 CDS YP_001566410.1 160900828 5751011 complement(5989946..5990770) 1 NC_010002.1 KEGG: aav:Aave_1067 hypothetical protein; hypothetical protein 5990770 5751011 Daci_5396 Delftia acidovorans SPH-1 hypothetical protein YP_001566410.1 5989946 R 398578 CDS YP_001566411.1 160900829 5751012 complement(5990775..5991320) 1 NC_010002.1 KEGG: aav:Aave_1066 hypothetical protein; hypothetical protein 5991320 5751012 Daci_5397 Delftia acidovorans SPH-1 hypothetical protein YP_001566411.1 5990775 R 398578 CDS YP_001566412.1 160900830 5751013 complement(5991396..5992277) 1 NC_010002.1 PFAM: TatD-related deoxyribonuclease; KEGG: vei:Veis_4583 TatD-related deoxyribonuclease; TatD-like deoxyribonuclease 5992277 5751013 Daci_5398 Delftia acidovorans SPH-1 TatD-like deoxyribonuclease YP_001566412.1 5991396 R 398578 CDS YP_001566413.1 160900831 5751014 5992432..5993898 1 NC_010002.1 KEGG: xac:XAC1746 chemotaxis protein; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; Pas/Pac sensor-containing methyl-accepting chemotaxis sensory transducer 5993898 5751014 Daci_5399 Delftia acidovorans SPH-1 Pas/Pac sensor-containing methyl-accepting chemotaxis sensory transducer YP_001566413.1 5992432 D 398578 CDS YP_001566414.1 160900832 5751015 complement(5993920..5994636) 1 NC_010002.1 KEGG: ajs:Ajs_3420 lipoprotein releasing system, ATP-binding protein; TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; lipoprotein releasing system ATP-binding protein 5994636 5751015 Daci_5400 Delftia acidovorans SPH-1 lipoprotein releasing system ATP-binding protein YP_001566414.1 5993920 R 398578 CDS YP_001566415.1 160900833 5751016 complement(5994629..5995900) 1 NC_010002.1 TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: ajs:Ajs_3421 lipoprotein releasing system, transmembrane protein, LolC/E family; LolC/E family lipoprotein releasing system, transmembrane protein 5995900 5751016 Daci_5401 Delftia acidovorans SPH-1 LolC/E family lipoprotein releasing system, transmembrane protein YP_001566415.1 5994629 R 398578 CDS YP_001566416.1 160900834 5751017 complement(5995944..5996450) 1 NC_010002.1 PFAM: regulatory protein MarR; transcriptional regulator TrmB; KEGG: aav:Aave_4468 transcriptional regulator, TrmB; transcriptional regulator TrmB 5996450 5751017 Daci_5402 Delftia acidovorans SPH-1 transcriptional regulator TrmB YP_001566416.1 5995944 R 398578 CDS YP_001566417.1 160900835 5751018 5996594..5997616 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: bbr:BB2467 hypothetical protein; hypothetical protein 5997616 5751018 Daci_5403 Delftia acidovorans SPH-1 hypothetical protein YP_001566417.1 5996594 D 398578 CDS YP_001566418.1 160900836 5751019 5997613..5998986 1 NC_010002.1 PFAM: sulfatase; KEGG: vei:Veis_2294 sulfatase; sulfatase 5998986 5751019 Daci_5404 Delftia acidovorans SPH-1 sulfatase YP_001566418.1 5997613 D 398578 CDS YP_001566419.1 160900837 5751020 5999053..6000051 1 NC_010002.1 KEGG: aav:Aave_3701 hypothetical protein; hypothetical protein 6000051 5751020 Daci_5405 Delftia acidovorans SPH-1 hypothetical protein YP_001566419.1 5999053 D 398578 CDS YP_001566420.1 160900838 5751021 6000062..6001780 1 NC_010002.1 TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: ajs:Ajs_3424 single-stranded-DNA-specific exonuclease RecJ; single-stranded-DNA-specific exonuclease RecJ 6001780 5751021 Daci_5406 Delftia acidovorans SPH-1 single-stranded-DNA-specific exonuclease RecJ YP_001566420.1 6000062 D 398578 CDS YP_001566421.1 160900839 5751022 6001878..6002558 1 NC_010002.1 PFAM: Curli production assembly/transport component CsgG; KEGG: eca:ECA4460 putative lipoprotein; curli production assembly/transport component CsgG 6002558 5751022 Daci_5407 Delftia acidovorans SPH-1 curli production assembly/transport component CsgG YP_001566421.1 6001878 D 398578 CDS YP_001566422.1 160900840 5751023 6002555..6002929 1 NC_010002.1 KEGG: ajs:Ajs_3428 hypothetical protein; hypothetical protein 6002929 5751023 Daci_5408 Delftia acidovorans SPH-1 hypothetical protein YP_001566422.1 6002555 D 398578 CDS YP_001566423.1 160900841 5751024 6002931..6003593 1 NC_010002.1 PFAM: protein of unknown function DUF799; KEGG: ajs:Ajs_3429 protein of unknown function DUF799; hypothetical protein 6003593 5751024 Daci_5409 Delftia acidovorans SPH-1 hypothetical protein YP_001566423.1 6002931 D 398578 CDS YP_001566424.1 160900842 5751025 complement(6003652..6005559) 1 NC_010002.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: ajs:Ajs_3430 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 6005559 5751025 Daci_5410 Delftia acidovorans SPH-1 methyl-accepting chemotaxis sensory transducer YP_001566424.1 6003652 R 398578 CDS YP_001566425.1 160900843 5751026 6005652..6006515 1 NC_010002.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: ajs:Ajs_3431 PHP C-terminal domain protein; phosphotransferase domain-containing protein 6006515 5751026 Daci_5411 Delftia acidovorans SPH-1 phosphotransferase domain-containing protein YP_001566425.1 6005652 D 398578 CDS YP_001566426.1 160900844 5751027 6006541..6007185 1 NC_010002.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; KEGG: aav:Aave_3708 SUA5/YciO/YrdC/YwlC family protein; Sua5/YciO/YrdC/YwlC family protein 6007185 5751027 Daci_5412 Delftia acidovorans SPH-1 Sua5/YciO/YrdC/YwlC family protein YP_001566426.1 6006541 D 398578 CDS YP_001566427.1 160900845 5751028 complement(6007291..6008685) 1 NC_010002.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: rme:Rmet_4185 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 6008685 5751028 Daci_5413 Delftia acidovorans SPH-1 methyl-accepting chemotaxis sensory transducer YP_001566427.1 6007291 R 398578 CDS YP_001566428.1 160900846 5751029 6008715..6009497 1 NC_010002.1 PFAM: peptidase M50; KEGG: aav:Aave_3710 peptidase M50; peptidase M50 6009497 5751029 Daci_5414 Delftia acidovorans SPH-1 peptidase M50 YP_001566428.1 6008715 D 398578 CDS YP_001566429.1 160900847 5751030 6009573..6010865 1 NC_010002.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 6010865 5751030 Daci_5415 Delftia acidovorans SPH-1 tryptophanyl-tRNA synthetase YP_001566429.1 6009573 D 398578 CDS YP_001566430.1 160900848 5751031 6010960..6011673 1 NC_010002.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: aav:Aave_4276 two component transcriptional regulator, winged helix family; two component transcriptional regulator 6011673 5751031 Daci_5416 Delftia acidovorans SPH-1 two component transcriptional regulator YP_001566430.1 6010960 D 398578 CDS YP_001566431.1 160900849 5751032 6011682..6013457 1 NC_010002.1 PFAM: Peptidoglycan-binding LysM; KEGG: mfa:Mfla_0431 peptidoglycan-binding LysM; peptidoglycan-binding LysM 6013457 5751032 Daci_5417 Delftia acidovorans SPH-1 peptidoglycan-binding LysM YP_001566431.1 6011682 D 398578 CDS YP_001566432.1 160900850 5751033 6013485..6015854 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; CHASE2 domain protein; KEGG: mms:mma_0215 two-component sensor histidine kinase; histidine kinase 6015854 5751033 Daci_5418 Delftia acidovorans SPH-1 histidine kinase YP_001566432.1 6013485 D 398578 CDS YP_001566433.1 160900851 5751036 complement(6016329..6017333) 1 NC_010002.1 Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor 6017333 hrcA 5751036 hrcA Delftia acidovorans SPH-1 heat-inducible transcription repressor YP_001566433.1 6016329 R 398578 CDS YP_001566434.1 160900852 5751037 6017364..6018260 1 NC_010002.1 catalyzes the phosphorylation of NAD to NADP; NAD(+)/NADH kinase family protein 6018260 ppnK 5751037 ppnK Delftia acidovorans SPH-1 NAD(+)/NADH kinase family protein YP_001566434.1 6017364 D 398578 CDS YP_001566435.1 160900853 5751038 6018263..6020038 1 NC_010002.1 TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: vei:Veis_1052 DNA repair protein RecN; DNA repair protein RecN 6020038 5751038 Daci_5421 Delftia acidovorans SPH-1 DNA repair protein RecN YP_001566435.1 6018263 D 398578 CDS YP_001566436.1 160900854 5751039 6020043..6020945 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: vei:Veis_1053 uncharacterised P-loop ATPase protein UPF0042; hypothetical protein 6020945 5751039 Daci_5422 Delftia acidovorans SPH-1 hypothetical protein YP_001566436.1 6020043 D 398578 CDS YP_001566437.1 160900855 5751040 6020975..6021694 1 NC_010002.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pol:Bpro_0237 two component transcriptional regulator, winged helix family; two component transcriptional regulator 6021694 5751040 Daci_5423 Delftia acidovorans SPH-1 two component transcriptional regulator YP_001566437.1 6020975 D 398578 CDS YP_001566438.1 160900856 5751041 6021711..6023171 1 NC_010002.1 part of a two-component regulatory system with CreB or PhoB; involved in catabolic regulation; sensory histidine kinase CreC 6023171 5751041 Daci_5424 Delftia acidovorans SPH-1 sensory histidine kinase CreC YP_001566438.1 6021711 D 398578 CDS YP_001566439.1 160900857 5751042 6023283..6024716 1 NC_010002.1 PFAM: Inner membrane CreD family protein; KEGG: aav:Aave_0316 inner membrane CreD family protein; hypothetical protein 6024716 5751042 Daci_5425 Delftia acidovorans SPH-1 hypothetical protein YP_001566439.1 6023283 D 398578 CDS YP_001566440.1 160900858 5751043 6024713..6024955 1 NC_010002.1 hypothetical protein 6024955 5751043 Daci_5426 Delftia acidovorans SPH-1 hypothetical protein YP_001566440.1 6024713 D 398578 CDS YP_001566441.1 160900859 5751044 complement(6024977..6026047) 1 NC_010002.1 KEGG: aav:Aave_3604 A/G-specific adenine glycosylase; TIGRFAM: A/G-specific adenine glycosylase; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; SMART: iron-sulfur cluster loop; A/G-specific adenine glycosylase 6026047 5751044 Daci_5427 Delftia acidovorans SPH-1 A/G-specific adenine glycosylase YP_001566441.1 6024977 R 398578 CDS YP_001566442.1 160900860 5751045 complement(6026052..6028070) 1 NC_010002.1 KEGG: ajs:Ajs_0900 hypothetical protein; hypothetical protein 6028070 5751045 Daci_5428 Delftia acidovorans SPH-1 hypothetical protein YP_001566442.1 6026052 R 398578 CDS YP_001566443.1 160900861 5751046 complement(6028386..6029216) 1 NC_010002.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 6029216 5751046 Daci_5429 Delftia acidovorans SPH-1 formamidopyrimidine-DNA glycosylase YP_001566443.1 6028386 R 398578 CDS YP_001566444.1 160900862 5751047 6029278..6031065 1 NC_010002.1 PFAM: Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: ajs:Ajs_0898 TPR repeat-containing protein; hypothetical protein 6031065 5751047 Daci_5430 Delftia acidovorans SPH-1 hypothetical protein YP_001566444.1 6029278 D 398578 CDS YP_001566445.1 160900863 5751048 6031062..6031610 1 NC_010002.1 PFAM: outer membrane lipoprotein LolB; KEGG: aav:Aave_3608 putative lipoprotein; outer membrane lipoprotein LolB 6031610 5751048 Daci_5431 Delftia acidovorans SPH-1 outer membrane lipoprotein LolB YP_001566445.1 6031062 D 398578 CDS YP_001566446.1 160900864 5751049 6031681..6032544 1 NC_010002.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 6032544 ipk 5751049 ipk Delftia acidovorans SPH-1 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_001566446.1 6031681 D 398578 CDS YP_001566447.1 160900865 5751051 6032695..6033654 1 NC_010002.1 KEGG: vei:Veis_0951 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase 6033654 5751051 Daci_5433 Delftia acidovorans SPH-1 ribose-phosphate pyrophosphokinase YP_001566447.1 6032695 D 398578 CDS YP_001566448.1 160900866 5751052 6033828..6034457 1 NC_010002.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc 6034457 5751052 Daci_5434 Delftia acidovorans SPH-1 50S ribosomal protein L25/general stress protein Ctc YP_001566448.1 6033828 D 398578 CDS YP_001566449.1 160900867 5751053 6034584..6035207 1 NC_010002.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 6035207 5751053 Daci_5435 Delftia acidovorans SPH-1 peptidyl-tRNA hydrolase YP_001566449.1 6034584 D 398578 CDS YP_001566450.1 160900868 5751054 complement(6035212..6035475) 1 NC_010002.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: aav:Aave_3613 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 6035475 5751054 Daci_5436 Delftia acidovorans SPH-1 4Fe-4S ferredoxin YP_001566450.1 6035212 R 398578 CDS YP_001566451.1 160900869 5751055 6035679..6036746 1 NC_010002.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_3614 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 6036746 5751055 Daci_5437 Delftia acidovorans SPH-1 binding-protein-dependent transport system inner membrane protein YP_001566451.1 6035679 D 398578 CDS YP_001566452.1 160900870 5751056 6036743..6037666 1 NC_010002.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_3615 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 6037666 5751056 Daci_5438 Delftia acidovorans SPH-1 binding-protein-dependent transport system inner membrane protein YP_001566452.1 6036743 D 398578 CDS YP_001566453.1 160900871 5751057 6037682..6038734 1 NC_010002.1 KEGG: vei:Veis_0137 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 6038734 5751057 Daci_5439 Delftia acidovorans SPH-1 oligopeptide/dipeptide ABC transporter ATPase YP_001566453.1 6037682 D 398578 CDS YP_001566454.1 160900872 5751058 6038731..6039588 1 NC_010002.1 PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: ajs:Ajs_0888 ABC transporter related; ABC transporter-like protein 6039588 5751058 Daci_5440 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001566454.1 6038731 D 398578 CDS YP_001566455.1 160900873 5751059 6039718..6041211 1 NC_010002.1 PFAM: extracellular solute-binding protein family 5; KEGG: ajs:Ajs_0887 extracellular solute-binding protein, family 5; extracellular solute-binding protein 6041211 5751059 Daci_5441 Delftia acidovorans SPH-1 extracellular solute-binding protein YP_001566455.1 6039718 D 398578 CDS YP_001566456.1 160900874 5751060 6041312..6042793 1 NC_010002.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 6042793 5751060 Daci_5442 Delftia acidovorans SPH-1 amidase YP_001566456.1 6041312 D 398578 CDS YP_001566457.1 160900875 5751061 complement(6042780..6043793) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: rme:Rmet_4501 twin-arginine translocation pathway signal; hypothetical protein 6043793 5751061 Daci_5443 Delftia acidovorans SPH-1 hypothetical protein YP_001566457.1 6042780 R 398578 CDS YP_001566458.1 160900876 5751062 complement(6043936..6044961) 1 NC_010002.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: reu:Reut_B3547 helix-turn-helix, AraC type; AraC family transcriptional regulator 6044961 5751062 Daci_5444 Delftia acidovorans SPH-1 AraC family transcriptional regulator YP_001566458.1 6043936 R 398578 CDS YP_001566459.1 160900877 5751063 complement(6045020..6045907) 1 NC_010002.1 KEGG: nmu:Nmul_A1494 esterase/lipase/thioesterase family active site; esterase/lipase/thioesterase family protein 6045907 5751063 Daci_5445 Delftia acidovorans SPH-1 esterase/lipase/thioesterase family protein YP_001566459.1 6045020 R 398578 CDS YP_001566460.1 160900878 5751064 complement(6045970..6046614) 1 NC_010002.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: ajs:Ajs_0885 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA 6046614 5751064 Daci_5446 Delftia acidovorans SPH-1 lysine exporter protein LysE/YggA YP_001566460.1 6045970 R 398578 CDS YP_001566461.1 160900879 5751065 complement(6046660..6047532) 1 NC_010002.1 KEGG: rfr:Rfer_1303 hypothetical protein; hypothetical protein 6047532 5751065 Daci_5447 Delftia acidovorans SPH-1 hypothetical protein YP_001566461.1 6046660 R 398578 CDS YP_001566462.1 160900880 5751066 complement(6047538..6048521) 1 NC_010002.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: aav:Aave_3629 protein of unknown function DUF6, transmembrane; hypothetical protein 6048521 5751066 Daci_5448 Delftia acidovorans SPH-1 hypothetical protein YP_001566462.1 6047538 R 398578 CDS YP_001566463.1 160900881 5751067 complement(6048531..6049262) 1 NC_010002.1 PFAM: GTP cyclohydrolase I; KEGG: ajs:Ajs_0879 GTP cyclohydrolase I; GTP cyclohydrolase I 6049262 5751067 Daci_5449 Delftia acidovorans SPH-1 GTP cyclohydrolase I YP_001566463.1 6048531 R 398578 CDS YP_001566464.1 160900882 5751068 complement(6049383..6050156) 1 NC_010002.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: ajs:Ajs_0877 endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase 6050156 5751068 Daci_5450 Delftia acidovorans SPH-1 endonuclease/exonuclease/phosphatase YP_001566464.1 6049383 R 398578 CDS YP_001566465.1 160900883 5751069 complement(6050184..6050669) 1 NC_010002.1 PFAM: NUDIX hydrolase; KEGG: ajs:Ajs_0876 NUDIX hydrolase; NUDIX hydrolase 6050669 5751069 Daci_5451 Delftia acidovorans SPH-1 NUDIX hydrolase YP_001566465.1 6050184 R 398578 CDS YP_001566466.1 160900884 5751070 complement(6050669..6051484) 1 NC_010002.1 KEGG: aav:Aave_3636 hypothetical protein; hypothetical protein 6051484 5751070 Daci_5452 Delftia acidovorans SPH-1 hypothetical protein YP_001566466.1 6050669 R 398578 CDS YP_001566467.1 160900885 5751071 complement(6051563..6053365) 1 NC_010002.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 6053365 aspS 5751071 aspS Delftia acidovorans SPH-1 aspartyl-tRNA synthetase YP_001566467.1 6051563 R 398578 CDS YP_001566468.1 160900886 5751072 complement(6053407..6054030) 1 NC_010002.1 PFAM: protein of unknown function DUF502; KEGG: aav:Aave_3638 protein of unknown function DUF502; hypothetical protein 6054030 5751072 Daci_5454 Delftia acidovorans SPH-1 hypothetical protein YP_001566468.1 6053407 R 398578 CDS YP_001566469.1 160900887 5751073 complement(6054049..6054366) 1 NC_010002.1 TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: aav:Aave_3639 putative regulatory protein, FmdB family; FmdB family regulatory protein 6054366 5751073 Daci_5455 Delftia acidovorans SPH-1 FmdB family regulatory protein YP_001566469.1 6054049 R 398578 CDS YP_001566470.1 160900888 5751074 complement(6054591..6056609) 1 NC_010002.1 KEGG: aau:AAur_0264 hypothetical protein; hypothetical protein 6056609 5751074 Daci_5456 Delftia acidovorans SPH-1 hypothetical protein YP_001566470.1 6054591 R 398578 CDS YP_001566471.1 160900889 5751075 complement(6056787..6058235) 1 NC_010002.1 PFAM: Na+/solute symporter; KEGG: ajs:Ajs_0871 Na+/solute symporter; Na+/solute symporter 6058235 5751075 Daci_5457 Delftia acidovorans SPH-1 Na+/solute symporter YP_001566471.1 6056787 R 398578 CDS YP_001566472.1 160900890 5751076 complement(6058294..6059859) 1 NC_010002.1 an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone; functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis; similar to eukaryotic proteins that exhibit kinase functions; putative ubiquinone biosynthesis protein UbiB 6059859 ubiB 5751076 ubiB Delftia acidovorans SPH-1 putative ubiquinone biosynthesis protein UbiB YP_001566472.1 6058294 R 398578 CDS YP_001566473.1 160900891 5751077 complement(6059856..6060494) 1 NC_010002.1 KEGG: aav:Aave_3642 hypothetical protein; hypothetical protein 6060494 5751077 Daci_5459 Delftia acidovorans SPH-1 hypothetical protein YP_001566473.1 6059856 R 398578 CDS YP_001566474.1 160900892 5751078 complement(6060616..6061632) 1 NC_010002.1 PFAM: import inner membrane translocase subunit Tim44; KEGG: ajs:Ajs_0868 import inner membrane translocase, subunit Tim44; import inner membrane translocase subunit Tim44 6061632 5751078 Daci_5460 Delftia acidovorans SPH-1 import inner membrane translocase subunit Tim44 YP_001566474.1 6060616 R 398578 CDS YP_001566475.1 160900893 5751079 complement(6061686..6062417) 1 NC_010002.1 TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: ajs:Ajs_0867 ubiquinone/menaquinone biosynthesis methyltransferases; ubiquinone/menaquinone biosynthesis methyltransferase 6062417 5751079 Daci_5461 Delftia acidovorans SPH-1 ubiquinone/menaquinone biosynthesis methyltransferase YP_001566475.1 6061686 R 398578 CDS YP_001566476.1 160900894 5751080 complement(6062645..6063067) 1 NC_010002.1 PFAM: protein of unknown function DUF971; KEGG: aav:Aave_3645 protein of unknown function DUF971; hypothetical protein 6063067 5751080 Daci_5462 Delftia acidovorans SPH-1 hypothetical protein YP_001566476.1 6062645 R 398578 CDS YP_001566477.1 160900895 5751081 complement(6063078..6063533) 1 NC_010002.1 PFAM: histidine triad (HIT) protein; KEGG: ajs:Ajs_0865 histidine triad (HIT) protein; histidine triad (HIT) protein 6063533 5751081 Daci_5463 Delftia acidovorans SPH-1 histidine triad (HIT) protein YP_001566477.1 6063078 R 398578 CDS YP_001566478.1 160900896 5751082 complement(6063533..6067447) 1 NC_010002.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; FAD linked oxidase domain protein; KEGG: aav:Aave_3648 FAD linked oxidase domain protein; FAD linked oxidase domain-containing protein 6067447 5751082 Daci_5464 Delftia acidovorans SPH-1 FAD linked oxidase domain-containing protein YP_001566478.1 6063533 R 398578 CDS YP_001566479.1 160900897 5751083 6067869..6069173 1 NC_010002.1 PFAM: extracellular solute-binding protein family 1; KEGG: aav:Aave_3650 extracellular solute-binding protein, family 1; extracellular solute-binding protein 6069173 5751083 Daci_5465 Delftia acidovorans SPH-1 extracellular solute-binding protein YP_001566479.1 6067869 D 398578 CDS YP_001566480.1 160900898 5751084 6069297..6070178 1 NC_010002.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_0856 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 6070178 5751084 Daci_5466 Delftia acidovorans SPH-1 binding-protein-dependent transport system inner membrane protein YP_001566480.1 6069297 D 398578 CDS YP_001566481.1 160900899 5751085 6070181..6071029 1 NC_010002.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_3652 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 6071029 5751085 Daci_5467 Delftia acidovorans SPH-1 binding-protein-dependent transport system inner membrane protein YP_001566481.1 6070181 D 398578 CDS YP_001566482.1 160900900 5751086 6071119..6072129 1 NC_010002.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: aav:Aave_3653 ABC transporter-related protein; ABC transporter-like protein 6072129 5751086 Daci_5468 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001566482.1 6071119 D 398578 CDS YP_001566483.1 160900901 5751087 6072220..6072984 1 NC_010002.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: ajs:Ajs_0858 glycerophosphodiester phosphodiesterase; glycerophosphodiester phosphodiesterase 6072984 5751087 Daci_5469 Delftia acidovorans SPH-1 glycerophosphodiester phosphodiesterase YP_001566483.1 6072220 D 398578 CDS YP_001566484.1 160900902 5751088 6073057..6075564 1 NC_010002.1 PFAM: MscS Mechanosensitive ion channel; KEGG: aav:Aave_3656 MscS mechanosensitive ion channel; mechanosensitive ion channel protein MscS 6075564 5751088 Daci_5470 Delftia acidovorans SPH-1 mechanosensitive ion channel protein MscS YP_001566484.1 6073057 D 398578 CDS YP_001566485.1 160900903 5751089 complement(6075561..6076466) 1 NC_010002.1 PFAM: N-formylglutamate amidohydrolase; KEGG: ajs:Ajs_0856 N-formylglutamate amidohydrolase; N-formylglutamate amidohydrolase 6076466 5751089 Daci_5471 Delftia acidovorans SPH-1 N-formylglutamate amidohydrolase YP_001566485.1 6075561 R 398578 CDS YP_001566486.1 160900904 5751090 complement(6076466..6077458) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0855 uncharacterized protein UPF0065; hypothetical protein 6077458 5751090 Daci_5472 Delftia acidovorans SPH-1 hypothetical protein YP_001566486.1 6076466 R 398578 CDS YP_001566487.1 160900905 5751091 6077607..6078530 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_0854 transcriptional regulator, LysR family; LysR family transcriptional regulator 6078530 5751091 Daci_5473 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001566487.1 6077607 D 398578 CDS YP_001566488.1 160900906 5751092 complement(6078586..6078861) 1 NC_010002.1 KEGG: rfr:Rfer_1282 hypothetical protein; hypothetical protein 6078861 5751092 Daci_5474 Delftia acidovorans SPH-1 hypothetical protein YP_001566488.1 6078586 R 398578 CDS YP_001566489.1 160900907 5751093 6078934..6080259 1 NC_010002.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 6080259 hemA 5751093 hemA Delftia acidovorans SPH-1 glutamyl-tRNA reductase YP_001566489.1 6078934 D 398578 CDS YP_001566490.1 160900908 5751094 6080433..6081515 1 NC_010002.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 6081515 prfA 5751094 prfA Delftia acidovorans SPH-1 peptide chain release factor 1 YP_001566490.1 6080433 D 398578 CDS YP_001566491.1 160900909 5751095 6081526..6082395 1 NC_010002.1 TIGRFAM: modification methylase, HemK family; protein-(glutamine-N5) methyltransferase, release factor-specific; PFAM: methyltransferase small; Methyltransferase type 12; KEGG: ajs:Ajs_0850 modification methylase, HemK family; protein-(glutamine-N5) methyltransferase 6082395 5751095 Daci_5477 Delftia acidovorans SPH-1 protein-(glutamine-N5) methyltransferase YP_001566491.1 6081526 D 398578 CDS YP_001566492.1 160900910 5751096 6082512..6082835 1 NC_010002.1 TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: ajs:Ajs_0849 glutaredoxin-like protein; glutaredoxin-like protein 6082835 5751096 Daci_5478 Delftia acidovorans SPH-1 glutaredoxin-like protein YP_001566492.1 6082512 D 398578 CDS YP_001566493.1 160900911 5751097 6082948..6084396 1 NC_010002.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: aav:Aave_3668 protein of unknown function DUF21; hypothetical protein 6084396 5751097 Daci_5479 Delftia acidovorans SPH-1 hypothetical protein YP_001566493.1 6082948 D 398578 CDS YP_001566494.1 160900912 5751098 complement(6084451..6085035) 1 NC_010002.1 PFAM: Lytic transglycosylase catalytic; KEGG: ajs:Ajs_0847 lytic transglycosylase, catalytic; lytic transglycosylase catalytic subunit 6085035 5751098 Daci_5480 Delftia acidovorans SPH-1 lytic transglycosylase catalytic subunit YP_001566494.1 6084451 R 398578 CDS YP_001566495.1 160900913 5751099 complement(6085101..6086846) 1 NC_010002.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 6086846 5751099 Daci_5481 Delftia acidovorans SPH-1 prolyl-tRNA synthetase YP_001566495.1 6085101 R 398578 CDS YP_001566496.1 160900914 5751100 6086940..6087629 1 NC_010002.1 hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 6087629 5751100 Daci_5482 Delftia acidovorans SPH-1 dinucleoside polyphosphate hydrolase YP_001566496.1 6086940 D 398578 CDS YP_001566497.1 160900915 5751101 complement(6087696..6088844) 1 NC_010002.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 6088844 5751101 Daci_5483 Delftia acidovorans SPH-1 gamma-glutamyl kinase YP_001566497.1 6087696 R 398578 CDS YP_001566498.1 160900916 5751102 complement(6088928..6090043) 1 NC_010002.1 TIGRFAM: GTP-binding protein Obg/CgtA; PFAM: GTP-binding protein HSR1-related; GTP1/OBG sub domain protein; KEGG: ajs:Ajs_0843 GTP1/OBG sub domain protein; GTP-binding protein Obg/CgtA 6090043 5751102 Daci_5484 Delftia acidovorans SPH-1 GTP-binding protein Obg/CgtA YP_001566498.1 6088928 R 398578 CDS YP_001566499.1 160900917 5751103 complement(6090193..6090450) 1 NC_010002.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 6090450 rpmA 5751103 rpmA Delftia acidovorans SPH-1 50S ribosomal protein L27 YP_001566499.1 6090193 R 398578 CDS YP_001566500.1 160900918 5751104 complement(6090466..6090777) 1 NC_010002.1 PFAM: ribosomal protein L21; KEGG: ajs:Ajs_0841 ribosomal protein L21; 50S ribosomal protein L21 6090777 5751104 Daci_5486 Delftia acidovorans SPH-1 50S ribosomal protein L21 YP_001566500.1 6090466 R 398578 CDS YP_001566501.1 160900919 5751105 6090858..6091937 1 NC_010002.1 PFAM: Polyprenyl synthetase; KEGG: ajs:Ajs_0840 dimethylallyltranstransferase; polyprenyl synthetase 6091937 5751105 Daci_5487 Delftia acidovorans SPH-1 polyprenyl synthetase YP_001566501.1 6090858 D 398578 CDS YP_001566502.1 160900920 5751107 6092178..6093920 1 NC_010002.1 KEGG: aav:Aave_3680 type IV-A pilus assembly ATPase PilB; TIGRFAM: type IV-A pilus assembly ATPase PilB; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; type IV-A pilus assembly ATPase PilB 6093920 5751107 Daci_5488 Delftia acidovorans SPH-1 type IV-A pilus assembly ATPase PilB YP_001566502.1 6092178 D 398578 CDS YP_001566503.1 160900921 5751108 6093959..6095176 1 NC_010002.1 PFAM: type II secretion system protein; KEGG: ajs:Ajs_0804 type II secretion system protein; type II secretion system protein 6095176 5751108 Daci_5489 Delftia acidovorans SPH-1 type II secretion system protein YP_001566503.1 6093959 D 398578 CDS YP_001566504.1 160900922 5751109 6095176..6096060 1 NC_010002.1 PFAM: peptidase A24A prepilin type IV; peptidase A24A domain protein; KEGG: aav:Aave_3682 prepilin peptidase; prepilin peptidase 6096060 5751109 Daci_5490 Delftia acidovorans SPH-1 prepilin peptidase YP_001566504.1 6095176 D 398578 CDS YP_001566505.1 160900923 5751110 6096075..6096719 1 NC_010002.1 KEGG: vei:Veis_3922 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; dephospho-CoA kinase 6096719 5751110 Daci_5491 Delftia acidovorans SPH-1 dephospho-CoA kinase YP_001566505.1 6096075 D 398578 CDS YP_001566506.1 160900924 5751111 6096809..6097564 1 NC_010002.1 PFAM: protein of unknown function DUF1342; KEGG: ajs:Ajs_0801 protein of unknown function DUF1342; hypothetical protein 6097564 5751111 Daci_5492 Delftia acidovorans SPH-1 hypothetical protein YP_001566506.1 6096809 D 398578 CDS YP_001566507.1 160900925 5751112 6097555..6097818 1 NC_010002.1 PFAM: protein of unknown function DUF329; KEGG: ajs:Ajs_0800 protein of unknown function DUF329; hypothetical protein 6097818 5751112 Daci_5493 Delftia acidovorans SPH-1 hypothetical protein YP_001566507.1 6097555 D 398578 CDS YP_001566508.1 160900926 5751113 complement(6097829..6098347) 1 NC_010002.1 PFAM: NUDIX hydrolase; KEGG: aav:Aave_3686 NUDIX hydrolase; NUDIX hydrolase 6098347 5751113 Daci_5494 Delftia acidovorans SPH-1 NUDIX hydrolase YP_001566508.1 6097829 R 398578 CDS YP_001566509.1 160900927 5751114 complement(6098398..6099354) 1 NC_010002.1 PFAM: protein of unknown function DUF815; KEGG: ajs:Ajs_0798 protein of unknown function DUF815; hypothetical protein 6099354 5751114 Daci_5495 Delftia acidovorans SPH-1 hypothetical protein YP_001566509.1 6098398 R 398578 CDS YP_001566510.1 160900928 5751115 complement(6099520..6100752) 1 NC_010002.1 bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase 6100752 argJ 5751115 argJ Delftia acidovorans SPH-1 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase YP_001566510.1 6099520 R 398578 CDS YP_001566511.1 160900929 5751116 complement(6100903..6103650) 1 NC_010002.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 6103650 5751116 Daci_5497 Delftia acidovorans SPH-1 preprotein translocase subunit SecA YP_001566511.1 6100903 R 398578 CDS YP_001566512.1 160900930 5751117 6103929..6104267 1 NC_010002.1 KEGG: aav:Aave_3691 hypothetical protein; hypothetical protein 6104267 5751117 Daci_5498 Delftia acidovorans SPH-1 hypothetical protein YP_001566512.1 6103929 D 398578 CDS YP_001566513.1 160900931 5751119 complement(6104511..6105041) 1 NC_010002.1 PFAM: Stringent starvation protein B; KEGG: aav:Aave_3692 stringent starvation protein B; stringent starvation protein B 6105041 5751119 Daci_5499 Delftia acidovorans SPH-1 stringent starvation protein B YP_001566513.1 6104511 R 398578 CDS YP_001566514.1 160900932 5751120 complement(6105145..6105756) 1 NC_010002.1 PFAM: Glutathione S-transferase domain; KEGG: aav:Aave_3693 glutathione S-transferase, N-terminal domain; glutathione S-transferase domain-containing protein 6105756 5751120 Daci_5500 Delftia acidovorans SPH-1 glutathione S-transferase domain-containing protein YP_001566514.1 6105145 R 398578 CDS YP_001566515.1 160900933 5751121 complement(6105860..6106615) 1 NC_010002.1 PFAM: cytochrome c1; KEGG: aav:Aave_3694 cytochrome c1; cytochrome c1 6106615 5751121 Daci_5501 Delftia acidovorans SPH-1 cytochrome c1 YP_001566515.1 6105860 R 398578 CDS YP_001566516.1 160900934 5751122 complement(6106633..6108048) 1 NC_010002.1 PFAM: Cytochrome b/b6 domain; KEGG: aav:Aave_3695 cytochrome b/b6, N-terminal domain; cytochrome b/b6 domain-containing protein 6108048 5751122 Daci_5502 Delftia acidovorans SPH-1 cytochrome b/b6 domain-containing protein YP_001566516.1 6106633 R 398578 CDS YP_001566517.1 160900935 5751123 complement(6108063..6108659) 1 NC_010002.1 KEGG: aav:Aave_3696 ubiquinol-cytochrome c reductase, iron-sulfur subunit; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein; ubiquinol-cytochrome c reductase, iron-sulfur subunit 6108659 5751123 Daci_5503 Delftia acidovorans SPH-1 ubiquinol-cytochrome c reductase, iron-sulfur subunit YP_001566517.1 6108063 R 398578 CDS YP_001566518.1 160900936 5751124 6108809..6109237 1 NC_010002.1 homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel 6109237 mscL 5751124 mscL Delftia acidovorans SPH-1 large-conductance mechanosensitive channel YP_001566518.1 6108809 D 398578 CDS YP_001566519.1 160900937 5751125 complement(6109330..6110391) 1 NC_010002.1 KEGG: ajs:Ajs_0787 4-hydroxythreonine-4-phosphate dehydrogenase; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; 4-hydroxythreonine-4-phosphate dehydrogenase 6110391 5751125 Daci_5505 Delftia acidovorans SPH-1 4-hydroxythreonine-4-phosphate dehydrogenase YP_001566519.1 6109330 R 398578 CDS YP_001566520.1 160900938 5751126 complement(6110504..6111265) 1 NC_010002.1 PFAM: protein of unknown function DUF34; KEGG: ajs:Ajs_0786 protein of unknown function DUF34; hypothetical protein 6111265 5751126 Daci_5506 Delftia acidovorans SPH-1 hypothetical protein YP_001566520.1 6110504 R 398578 CDS YP_001566521.1 160900939 5751127 complement(6111340..6112665) 1 NC_010002.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: aav:Aave_1058 major facilitator superfamily MFS_1; major facilitator transporter 6112665 5751127 Daci_5507 Delftia acidovorans SPH-1 major facilitator transporter YP_001566521.1 6111340 R 398578 CDS YP_001566522.1 160900940 5751128 6113481..6113957 1 NC_010002.1 hypothetical protein 6113957 5751128 Daci_5508 Delftia acidovorans SPH-1 hypothetical protein YP_001566522.1 6113481 D 398578 CDS YP_001566523.1 160900941 5751129 complement(6114433..6114894) 1 NC_010002.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: xau:Xaut_3079 Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein 6114894 5751129 Daci_5509 Delftia acidovorans SPH-1 Sel1 domain-containing protein YP_001566523.1 6114433 R 398578 CDS YP_001566524.1 160900942 5751130 complement(6114891..6119063) 1 NC_010002.1 TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; KEGG: hch:HCH_02779 rhs family protein; YD repeat-containing protein 6119063 5751130 Daci_5510 Delftia acidovorans SPH-1 YD repeat-containing protein YP_001566524.1 6114891 R 398578 CDS YP_001566525.1 160900943 5751131 complement(6119167..6123525) 1 NC_010002.1 KEGG: hch:HCH_02778 protein containing fibronectin type III domains; hypothetical protein 6123525 5751131 Daci_5511 Delftia acidovorans SPH-1 hypothetical protein YP_001566525.1 6119167 R 398578 CDS YP_001566526.1 160900944 5751132 complement(6123539..6127999) 1 NC_010002.1 KEGG: sus:Acid_6164 Ig family protein; hypothetical protein 6127999 5751132 Daci_5512 Delftia acidovorans SPH-1 hypothetical protein YP_001566526.1 6123539 R 398578 CDS YP_001566527.1 160900945 5751133 complement(6128046..6128996) 1 NC_010002.1 hypothetical protein 6128996 5751133 Daci_5513 Delftia acidovorans SPH-1 hypothetical protein YP_001566527.1 6128046 R 398578 CDS YP_001566528.1 160900946 5751134 complement(6128993..6133507) 1 NC_010002.1 KEGG: hch:HCH_02780 RTX toxins and related Ca2+-binding protein; hypothetical protein 6133507 5751134 Daci_5514 Delftia acidovorans SPH-1 hypothetical protein YP_001566528.1 6128993 R 398578 CDS YP_001566529.1 160900947 5751135 6133824..6134975 1 NC_010002.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: ajs:Ajs_0784 peptidase S1 and S6, chymotrypsin/Hap; 2-alkenal reductase 6134975 5751135 Daci_5515 Delftia acidovorans SPH-1 2-alkenal reductase YP_001566529.1 6133824 D 398578 CDS YP_001566530.1 160900948 5751136 complement(6135045..6135947) 1 NC_010002.1 PFAM: Aldose 1-epimerase; KEGG: aav:Aave_1046 aldose 1-epimerase; aldose 1-epimerase 6135947 5751136 Daci_5516 Delftia acidovorans SPH-1 aldose 1-epimerase YP_001566530.1 6135045 R 398578 CDS YP_001566531.1 160900949 5751137 6135988..6137223 1 NC_010002.1 KEGG: aav:Aave_1035 hypothetical protein; hypothetical protein 6137223 5751137 Daci_5517 Delftia acidovorans SPH-1 hypothetical protein YP_001566531.1 6135988 D 398578 CDS YP_001566532.1 160900950 5751138 complement(6137309..6138049) 1 NC_010002.1 TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein; KEGG: ajs:Ajs_0765 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 6138049 5751138 Daci_5518 Delftia acidovorans SPH-1 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase YP_001566532.1 6137309 R 398578 CDS YP_001566533.1 160900951 5751139 complement(6138111..6138773) 1 NC_010002.1 TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I; CobB/CobQ domain protein glutamine amidotransferase; KEGG: ajs:Ajs_0764 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 6138773 5751139 Daci_5519 Delftia acidovorans SPH-1 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit YP_001566533.1 6138111 R 398578 CDS YP_001566534.1 160900952 5751140 complement(6138861..6139466) 1 NC_010002.1 PFAM: imidazoleglycerol-phosphate dehydratase; KEGG: aav:Aave_1032 imidazoleglycerol-phosphate dehydratase; imidazoleglycerol-phosphate dehydratase 6139466 5751140 Daci_5520 Delftia acidovorans SPH-1 imidazoleglycerol-phosphate dehydratase YP_001566534.1 6138861 R 398578 CDS YP_001566535.1 160900953 5751141 complement(6139463..6140587) 1 NC_010002.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 6140587 5751141 Daci_5521 Delftia acidovorans SPH-1 histidinol-phosphate aminotransferase YP_001566535.1 6139463 R 398578 CDS YP_001566536.1 160900954 5751142 complement(6140641..6141078) 1 NC_010002.1 KEGG: ajs:Ajs_0761 hypothetical protein; hypothetical protein 6141078 5751142 Daci_5522 Delftia acidovorans SPH-1 hypothetical protein YP_001566536.1 6140641 R 398578 CDS YP_001566537.1 160900955 5751143 complement(6141075..6141380) 1 NC_010002.1 KEGG: ajs:Ajs_0761 hypothetical protein; hypothetical protein 6141380 5751143 Daci_5523 Delftia acidovorans SPH-1 hypothetical protein YP_001566537.1 6141075 R 398578 CDS YP_001566538.1 160900956 5751144 complement(6141458..6142774) 1 NC_010002.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 6142774 hisD 5751144 hisD Delftia acidovorans SPH-1 histidinol dehydrogenase YP_001566538.1 6141458 R 398578 CDS YP_001566539.1 160900957 5751145 complement(6142792..6143463) 1 NC_010002.1 KEGG: pau:PA14_28990 hypothetical protein; hypothetical protein 6143463 5751145 Daci_5525 Delftia acidovorans SPH-1 hypothetical protein YP_001566539.1 6142792 R 398578 CDS YP_001566540.1 160900958 5751146 complement(6143447..6144097) 1 NC_010002.1 KEGG: aav:Aave_1023 ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase catalytic region; ATP phosphoribosyltransferase 6144097 5751146 Daci_5526 Delftia acidovorans SPH-1 ATP phosphoribosyltransferase YP_001566540.1 6143447 R 398578 CDS YP_001566541.1 160900959 5751147 complement(6144094..6145362) 1 NC_010002.1 TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); KEGG: aav:Aave_1022 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 6145362 5751147 Daci_5527 Delftia acidovorans SPH-1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_001566541.1 6144094 R 398578 CDS YP_001566542.1 160900960 5751148 complement(6145459..6145707) 1 NC_010002.1 PFAM: BolA family protein; KEGG: aav:Aave_1021 BolA family protein; BolA family protein 6145707 5751148 Daci_5528 Delftia acidovorans SPH-1 BolA family protein YP_001566542.1 6145459 R 398578 CDS YP_001566543.1 160900961 5751149 complement(6145835..6146590) 1 NC_010002.1 PFAM: ABC-2 type transporter; KEGG: aav:Aave_1020 ABC-2 type transporter; ABC-2 type transporter 6146590 5751149 Daci_5529 Delftia acidovorans SPH-1 ABC-2 type transporter YP_001566543.1 6145835 R 398578 CDS YP_001566544.1 160900962 5751150 complement(6146587..6147516) 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_1019 ABC transporter-related protein; ABC transporter-like protein 6147516 5751150 Daci_5530 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001566544.1 6146587 R 398578 CDS YP_001566545.1 160900963 5751151 complement(6147590..6147871) 1 NC_010002.1 KEGG: vei:Veis_2402 sulfate transporter/antisigma-factor antagonist STAS; sulfate transporter/antisigma-factor antagonist STAS 6147871 5751151 Daci_5531 Delftia acidovorans SPH-1 sulfate transporter/antisigma-factor antagonist STAS YP_001566545.1 6147590 R 398578 CDS YP_001566546.1 160900964 5751152 complement(6147892..6148533) 1 NC_010002.1 PFAM: toluene tolerance family protein; KEGG: ajs:Ajs_0752 toluene tolerance family protein; toluene tolerance family protein 6148533 5751152 Daci_5532 Delftia acidovorans SPH-1 toluene tolerance family protein YP_001566546.1 6147892 R 398578 CDS YP_001566547.1 160900965 5751153 complement(6148650..6149453) 1 NC_010002.1 PFAM: VacJ family lipoprotein; KEGG: ajs:Ajs_0751 VacJ family lipoprotein; VacJ family lipoprotein 6149453 5751153 Daci_5533 Delftia acidovorans SPH-1 VacJ family lipoprotein YP_001566547.1 6148650 R 398578 CDS YP_001566548.1 160900966 5751154 complement(6149450..6149935) 1 NC_010002.1 PFAM: Mammalian cell entry related domain protein; KEGG: ajs:Ajs_0750 mammalian cell entry related domain protein; hypothetical protein 6149935 5751154 Daci_5534 Delftia acidovorans SPH-1 hypothetical protein YP_001566548.1 6149450 R 398578 CDS YP_001566549.1 160900967 5751155 complement(6149980..6150762) 1 NC_010002.1 PFAM: protein of unknown function DUF140; KEGG: aav:Aave_1014 protein of unknown function DUF140; hypothetical protein 6150762 5751155 Daci_5535 Delftia acidovorans SPH-1 hypothetical protein YP_001566549.1 6149980 R 398578 CDS YP_001566550.1 160900968 5751156 complement(6150759..6151688) 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_0748 ABC transporter related; ABC transporter-like protein 6151688 5751156 Daci_5536 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001566550.1 6150759 R 398578 CDS YP_001566551.1 160900969 5751157 complement(6151816..6152583) 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_1012 ABC transporter-related protein; ABC transporter-like protein 6152583 5751157 Daci_5537 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001566551.1 6151816 R 398578 CDS YP_001566552.1 160900970 5751158 complement(6152731..6153384) 1 NC_010002.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_0744 polar amino acid ABC transporter, inner membrane subunit; polar amino acid ABC transporter inner membrane protein 6153384 5751158 Daci_5538 Delftia acidovorans SPH-1 polar amino acid ABC transporter inner membrane protein YP_001566552.1 6152731 R 398578 CDS YP_001566553.1 160900971 5751159 complement(6153516..6154322) 1 NC_010002.1 PFAM: extracellular solute-binding protein family 3; KEGG: aav:Aave_1010 extracellular solute-binding protein, family 3; extracellular solute-binding protein 6154322 5751159 Daci_5539 Delftia acidovorans SPH-1 extracellular solute-binding protein YP_001566553.1 6153516 R 398578 CDS YP_001566554.1 160900972 5751160 complement(6154531..6155904) 1 NC_010002.1 KEGG: aav:Aave_1037 putative transmembrane protein; putative transmembrane protein 6155904 5751160 Daci_5540 Delftia acidovorans SPH-1 putative transmembrane protein YP_001566554.1 6154531 R 398578 CDS YP_001566555.1 160900973 5751161 complement(6155904..6157460) 1 NC_010002.1 PFAM: glycosyl transferase group 1; KEGG: aav:Aave_1038 glycosyl transferase, group 1; glycosyl transferase group 1 protein 6157460 5751161 Daci_5541 Delftia acidovorans SPH-1 glycosyl transferase group 1 protein YP_001566555.1 6155904 R 398578 CDS YP_001566556.1 160900974 5751162 complement(6157457..6158479) 1 NC_010002.1 KEGG: aav:Aave_1039 putative transmembrane protein; putative transmembrane protein 6158479 5751162 Daci_5542 Delftia acidovorans SPH-1 putative transmembrane protein YP_001566556.1 6157457 R 398578 CDS YP_001566557.1 160900975 5751163 complement(6158472..6159851) 1 NC_010002.1 KEGG: ajs:Ajs_0770 putative transmembrane protein; putative transmembrane protein 6159851 5751163 Daci_5543 Delftia acidovorans SPH-1 putative transmembrane protein YP_001566557.1 6158472 R 398578 CDS YP_001566558.1 160900976 5751164 complement(6159875..6160426) 1 NC_010002.1 KEGG: aav:Aave_1041 putative lipoprotein; putative lipoprotein 6160426 5751164 Daci_5544 Delftia acidovorans SPH-1 putative lipoprotein YP_001566558.1 6159875 R 398578 CDS YP_001566559.1 160900977 5751165 complement(6160452..6164291) 1 NC_010002.1 KEGG: ajs:Ajs_0772 tetratricopeptide TPR_2 repeat protein; hypothetical protein 6164291 5751165 Daci_5545 Delftia acidovorans SPH-1 hypothetical protein YP_001566559.1 6160452 R 398578 CDS YP_001566560.1 160900978 5751166 complement(6164257..6167085) 1 NC_010002.1 KEGG: aav:Aave_1043 putative signal peptide protein; putative signal peptide protein 6167085 5751166 Daci_5546 Delftia acidovorans SPH-1 putative signal peptide protein YP_001566560.1 6164257 R 398578 CDS YP_001566561.1 160900979 5751167 6167321..6168331 1 NC_010002.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: aav:Aave_1044 UDP-glucose 4-epimerase; UDP-glucose 4-epimerase 6168331 5751167 Daci_5547 Delftia acidovorans SPH-1 UDP-glucose 4-epimerase YP_001566561.1 6167321 D 398578 CDS YP_001566562.1 160900980 5751168 6168408..6169208 1 NC_010002.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 6169208 5751168 Daci_5548 Delftia acidovorans SPH-1 imidazole glycerol phosphate synthase subunit HisF YP_001566562.1 6168408 D 398578 CDS YP_001566563.1 160900981 5751169 6169453..6169851 1 NC_010002.1 PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; phosphoribosyl-AMP cyclohydrolase 6169851 hisI 5751169 hisI Delftia acidovorans SPH-1 phosphoribosyl-AMP cyclohydrolase YP_001566563.1 6169453 D 398578 CDS YP_001566564.1 160900982 5751170 6169848..6170261 1 NC_010002.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; phosphoribosyl-ATP pyrophosphatase 6170261 hisE 5751170 hisE Delftia acidovorans SPH-1 phosphoribosyl-ATP pyrophosphatase YP_001566564.1 6169848 D 398578 CDS YP_001566565.1 160900983 5751171 6170258..6170650 1 NC_010002.1 KEGG: ajs:Ajs_0778 putative transmembrane protein; putative transmembrane protein 6170650 5751171 Daci_5551 Delftia acidovorans SPH-1 putative transmembrane protein YP_001566565.1 6170258 D 398578 CDS YP_001566566.1 160900984 5751172 6170670..6171701 1 NC_010002.1 PFAM: Patatin; KEGG: ajs:Ajs_0779 patatin; patatin 6171701 5751172 Daci_5552 Delftia acidovorans SPH-1 patatin YP_001566566.1 6170670 D 398578 CDS YP_001566567.1 160900985 5751173 6171743..6172105 1 NC_010002.1 PFAM: histidine triad (HIT) protein; KEGG: vei:Veis_0702 histidine triad (HIT) protein; histidine triad (HIT) protein 6172105 5751173 Daci_5553 Delftia acidovorans SPH-1 histidine triad (HIT) protein YP_001566567.1 6171743 D 398578 CDS YP_001566568.1 160900986 5751174 6172300..6172539 1 NC_010002.1 TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase protein A 6172539 tatA 5751174 tatA Delftia acidovorans SPH-1 twin arginine translocase protein A YP_001566568.1 6172300 D 398578 CDS YP_001566569.1 160900987 5751175 6172561..6173058 1 NC_010002.1 TIGRFAM: twin-arginine translocation protein, TatB subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: ajs:Ajs_0782 twin-arginine translocation protein, TatB subunit; sec-independent translocase 6173058 tatB 5751175 tatB Delftia acidovorans SPH-1 sec-independent translocase YP_001566569.1 6172561 D 398578 CDS YP_001566570.1 160900988 5751176 6173209..6174033 1 NC_010002.1 TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: ajs:Ajs_0783 sec-independent protein translocase, TatC subunit; Sec-independent protein translocase subunit TatC 6174033 5751176 Daci_5556 Delftia acidovorans SPH-1 Sec-independent protein translocase subunit TatC YP_001566570.1 6173209 D 398578 CDS YP_001566571.1 160900989 5751177 complement(6174244..6175719) 1 NC_010002.1 glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 6175719 gltD 5751177 gltD Delftia acidovorans SPH-1 glutamate synthase subunit beta YP_001566571.1 6174244 R 398578 CDS YP_001566572.1 160900990 5751178 complement(6175873..6180603) 1 NC_010002.1 PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: ajs:Ajs_0741 glutamate synthase (ferredoxin); glutamate synthase 6180603 5751178 Daci_5558 Delftia acidovorans SPH-1 glutamate synthase YP_001566572.1 6175873 R 398578 CDS YP_001566573.1 160900991 5751179 complement(6180792..6181502) 1 NC_010002.1 PFAM: protein of unknown function DUF1568; KEGG: pol:Bpro_0790 protein of unknown function DUF1568; hypothetical protein 6181502 5751179 Daci_5559 Delftia acidovorans SPH-1 hypothetical protein YP_001566573.1 6180792 R 398578 CDS YP_001566574.1 160900992 5751180 complement(6181558..6182442) 1 NC_010002.1 TIGRFAM: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family; PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: ajs:Ajs_3551 beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family; IclR family transcriptional regulator 6182442 5751180 Daci_5560 Delftia acidovorans SPH-1 IclR family transcriptional regulator YP_001566574.1 6181558 R 398578 CDS YP_001566575.1 160900993 5751181 6182484..6183185 1 NC_010002.1 KEGG: ajs:Ajs_3550 3-oxoacid CoA-transferase, A subunit; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit A 6183185 5751181 Daci_5561 Delftia acidovorans SPH-1 3-oxoacid CoA-transferase subunit A YP_001566575.1 6182484 D 398578 CDS YP_001566576.1 160900994 5751182 6183182..6183871 1 NC_010002.1 KEGG: ajs:Ajs_3549 3-oxoacid CoA-transferase, B subunit; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit B 6183871 5751182 Daci_5562 Delftia acidovorans SPH-1 3-oxoacid CoA-transferase subunit B YP_001566576.1 6183182 D 398578 CDS YP_001566577.1 160900995 5751183 6183947..6185158 1 NC_010002.1 KEGG: ajs:Ajs_3548 beta-ketoadipyl CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferase; beta-ketoadipyl CoA thiolase; PFAM: Thiolase; beta-ketoadipyl CoA thiolase 6185158 5751183 Daci_5563 Delftia acidovorans SPH-1 beta-ketoadipyl CoA thiolase YP_001566577.1 6183947 D 398578 CDS YP_001566578.1 160900996 5751184 6185166..6185906 1 NC_010002.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pna:Pnap_0868 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 6185906 5751184 Daci_5564 Delftia acidovorans SPH-1 short-chain dehydrogenase/reductase SDR YP_001566578.1 6185166 D 398578 CDS YP_001566579.1 160900997 5751185 6186082..6187089 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: pna:Pnap_0869 uncharacterized protein UPF0065; hypothetical protein 6187089 5751185 Daci_5565 Delftia acidovorans SPH-1 hypothetical protein YP_001566579.1 6186082 D 398578 CDS YP_001566580.1 160900998 5751186 complement(6187278..6188081) 1 NC_010002.1 KEGG: rso:RSc0099 putative signal peptide protein; putative signal peptide protein 6188081 5751186 Daci_5566 Delftia acidovorans SPH-1 putative signal peptide protein YP_001566580.1 6187278 R 398578 CDS YP_001566581.1 160900999 5751187 complement(6188177..6189733) 1 NC_010002.1 PFAM: Alkaline phosphatase; KEGG: rso:RSc0098 putative alkaline phosphatase signal peptide protein; alkaline phosphatase 6189733 5751187 Daci_5567 Delftia acidovorans SPH-1 alkaline phosphatase YP_001566581.1 6188177 R 398578 CDS YP_001566582.1 160901000 5751188 complement(6189733..6191145) 1 NC_010002.1 PFAM: Alkaline phosphatase; KEGG: rso:RSc0097 putative alkaline phosphatase lipoprotein transmembrane; alkaline phosphatase 6191145 5751188 Daci_5568 Delftia acidovorans SPH-1 alkaline phosphatase YP_001566582.1 6189733 R 398578 CDS YP_001566583.1 160901001 5751189 6191338..6192429 1 NC_010002.1 PFAM: beta-lactamase domain protein; KEGG: vei:Veis_2417 beta-lactamase domain protein; beta-lactamase domain-containing protein 6192429 5751189 Daci_5569 Delftia acidovorans SPH-1 beta-lactamase domain-containing protein YP_001566583.1 6191338 D 398578 CDS YP_001566584.1 160901002 5751190 complement(6192498..6193475) 1 NC_010002.1 hypothetical protein 6193475 5751190 Daci_5570 Delftia acidovorans SPH-1 hypothetical protein YP_001566584.1 6192498 R 398578 CDS YP_001566585.1 160901003 5751191 complement(6194257..6195129) 1 NC_010002.1 KEGG: aav:Aave_1006 hypothetical protein; hypothetical protein 6195129 5751191 Daci_5571 Delftia acidovorans SPH-1 hypothetical protein YP_001566585.1 6194257 R 398578 CDS YP_001566586.1 160901004 5751192 complement(6195126..6195746) 1 NC_010002.1 PFAM: protein of unknown function DUF1415; KEGG: aav:Aave_1005 protein of unknown function DUF1415; hypothetical protein 6195746 5751192 Daci_5572 Delftia acidovorans SPH-1 hypothetical protein YP_001566586.1 6195126 R 398578 CDS YP_001566587.1 160901005 5751193 complement(6195885..6197063) 1 NC_010002.1 dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein 6197063 5751193 Daci_5573 Delftia acidovorans SPH-1 deoxyguanosinetriphosphate triphosphohydrolase-like protein YP_001566587.1 6195885 R 398578 CDS YP_001566588.1 160901006 5751194 complement(6197128..6198246) 1 NC_010002.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 6198246 aroB 5751194 aroB Delftia acidovorans SPH-1 3-dehydroquinate synthase YP_001566588.1 6197128 R 398578 CDS YP_001566589.1 160901007 5751195 complement(6198376..6198921) 1 NC_010002.1 PFAM: shikimate kinase; KEGG: pna:Pnap_0678 shikimate kinase; shikimate kinase 6198921 5751195 Daci_5575 Delftia acidovorans SPH-1 shikimate kinase YP_001566589.1 6198376 R 398578 CDS YP_001566590.1 160901008 5751196 complement(6198930..6200537) 1 NC_010002.1 KEGG: aav:Aave_1001 Ig domain protein, group 1 domain protein; hypothetical protein 6200537 5751196 Daci_5576 Delftia acidovorans SPH-1 hypothetical protein YP_001566590.1 6198930 R 398578 CDS YP_001566591.1 160901009 5751197 complement(6200561..6202711) 1 NC_010002.1 TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB short domain; KEGG: aav:Aave_1000 type IV pilus secretin PilQ; type IV pilus secretin PilQ 6202711 5751197 Daci_5577 Delftia acidovorans SPH-1 type IV pilus secretin PilQ YP_001566591.1 6200561 R 398578 CDS YP_001566592.1 160901010 5751198 complement(6202708..6203256) 1 NC_010002.1 PFAM: Pilus assembly protein PilP; KEGG: aav:Aave_0999 pilus assembly protein, PilQ; pilus assembly protein PilP 6203256 5751198 Daci_5578 Delftia acidovorans SPH-1 pilus assembly protein PilP YP_001566592.1 6202708 R 398578 CDS YP_001566593.1 160901011 5751199 complement(6203256..6203933) 1 NC_010002.1 PFAM: Pilus assembly protein PilO; KEGG: aav:Aave_0998 pilus assembly protein, PilO; pilus assembly protein PilO 6203933 5751199 Daci_5579 Delftia acidovorans SPH-1 pilus assembly protein PilO YP_001566593.1 6203256 R 398578 CDS YP_001566594.1 160901012 5751200 complement(6203933..6204544) 1 NC_010002.1 PFAM: Fimbrial assembly family protein; KEGG: ajs:Ajs_0731 fimbrial assembly family protein; fimbrial assembly family protein 6204544 5751200 Daci_5580 Delftia acidovorans SPH-1 fimbrial assembly family protein YP_001566594.1 6203933 R 398578 CDS YP_001566595.1 160901013 5751201 complement(6204541..6205620) 1 NC_010002.1 TIGRFAM: type IV pilus assembly protein PilM; KEGG: aav:Aave_0996 type IV pilus assembly protein PilM; type IV pilus assembly protein PilM 6205620 5751201 Daci_5581 Delftia acidovorans SPH-1 type IV pilus assembly protein PilM YP_001566595.1 6204541 R 398578 CDS YP_001566596.1 160901014 5751202 6205842..6208316 1 NC_010002.1 KEGG: aav:Aave_0995 penicillin-binding protein, 1A family; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; 1A family penicillin-binding protein 6208316 5751202 Daci_5582 Delftia acidovorans SPH-1 1A family penicillin-binding protein YP_001566596.1 6205842 D 398578 CDS YP_001566597.1 160901015 5751203 complement(6208396..6208734) 1 NC_010002.1 TIGRFAM: iron donor protein CyaY; PFAM: Frataxin family protein; KEGG: aav:Aave_0994 frataxin family protein; iron donor protein CyaY 6208734 5751203 Daci_5583 Delftia acidovorans SPH-1 iron donor protein CyaY YP_001566597.1 6208396 R 398578 CDS YP_001566598.1 160901016 5751204 6209120..6209947 1 NC_010002.1 PFAM: beta-lactamase domain protein; KEGG: aav:Aave_0991 beta-lactamase domain protein; beta-lactamase domain-containing protein 6209947 5751204 Daci_5584 Delftia acidovorans SPH-1 beta-lactamase domain-containing protein YP_001566598.1 6209120 D 398578 CDS YP_001566599.1 160901017 5751205 complement(6209944..6210576) 1 NC_010002.1 PFAM: Ferric reductase domain protein transmembrane component domain; KEGG: pol:Bpro_0776 ferric reductase-like transmembrane component-like; ferric reductase domain-containing protein 6210576 5751205 Daci_5585 Delftia acidovorans SPH-1 ferric reductase domain-containing protein YP_001566599.1 6209944 R 398578 CDS YP_001566600.1 160901018 5751206 complement(6210578..6211558) 1 NC_010002.1 in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; putative sulfite oxidase subunit YedY 6211558 5751206 Daci_5586 Delftia acidovorans SPH-1 putative sulfite oxidase subunit YedY YP_001566600.1 6210578 R 398578 CDS YP_001566601.1 160901019 5751207 complement(6211741..6213081) 1 NC_010002.1 TIGRFAM: cytochrome c-type biogenesis protein CcsB; PFAM: cytochrome c assembly protein; KEGG: aav:Aave_0986 cytochrome c assembly protein; cytochrome c-type biogenesis protein CcsB 6213081 5751207 Daci_5587 Delftia acidovorans SPH-1 cytochrome c-type biogenesis protein CcsB YP_001566601.1 6211741 R 398578 CDS YP_001566602.1 160901020 5751208 complement(6213078..6215261) 1 NC_010002.1 PFAM: ResB family protein; KEGG: aav:Aave_0985 ResB family protein; ResB family protein 6215261 5751208 Daci_5588 Delftia acidovorans SPH-1 ResB family protein YP_001566602.1 6213078 R 398578 CDS YP_001566603.1 160901021 5751209 complement(6215401..6216168) 1 NC_010002.1 PFAM: cytochrome c class I; KEGG: ajs:Ajs_0710 cytochrome c, class I; class I cytochrome c 6216168 5751209 Daci_5589 Delftia acidovorans SPH-1 class I cytochrome c YP_001566603.1 6215401 R 398578 CDS YP_001566604.1 160901022 5751210 complement(6216328..6217260) 1 NC_010002.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: vei:Veis_3165 helix-turn-helix-domain containing protein, AraC type; AraC family transcriptional regulator 6217260 5751210 Daci_5590 Delftia acidovorans SPH-1 AraC family transcriptional regulator YP_001566604.1 6216328 R 398578 CDS YP_001566605.1 160901023 5751211 complement(6217315..6218259) 1 NC_010002.1 PFAM: PfkB domain protein; KEGG: sil:SPOA0276 fructokinase; ribokinase-like domain-containing protein 6218259 5751211 Daci_5591 Delftia acidovorans SPH-1 ribokinase-like domain-containing protein YP_001566605.1 6217315 R 398578 CDS YP_001566606.1 160901024 5751212 complement(6218265..6219689) 1 NC_010002.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: vei:Veis_3167 mannitol dehydrogenase, C-terminal domain; mannitol dehydrogenase domain-containing protein 6219689 5751212 Daci_5592 Delftia acidovorans SPH-1 mannitol dehydrogenase domain-containing protein YP_001566606.1 6218265 R 398578 CDS YP_001566607.1 160901025 5751213 complement(6219754..6220812) 1 NC_010002.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: vei:Veis_3168 ABC transporter related; ABC transporter-like protein 6220812 5751213 Daci_5593 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001566607.1 6219754 R 398578 CDS YP_001566608.1 160901026 5751214 complement(6220858..6221676) 1 NC_010002.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_3169 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 6221676 5751214 Daci_5594 Delftia acidovorans SPH-1 binding-protein-dependent transport system inner membrane protein YP_001566608.1 6220858 R 398578 CDS YP_001566609.1 160901027 5751215 complement(6221684..6222577) 1 NC_010002.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_3170 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 6222577 5751215 Daci_5595 Delftia acidovorans SPH-1 binding-protein-dependent transport system inner membrane protein YP_001566609.1 6221684 R 398578 CDS YP_001566610.1 160901028 5751216 complement(6222574..6223884) 1 NC_010002.1 PFAM: extracellular solute-binding protein family 1; KEGG: vei:Veis_3171 extracellular solute-binding protein, family 1; extracellular solute-binding protein 6223884 5751216 Daci_5596 Delftia acidovorans SPH-1 extracellular solute-binding protein YP_001566610.1 6222574 R 398578 CDS YP_001566611.1 160901029 5751217 6224125..6225027 1 NC_010002.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: vei:Veis_2571 SMP-30/gluconolaconase/LRE domain protein; SMP-30/gluconolaconase/LRE domain-containing protein 6225027 5751217 Daci_5597 Delftia acidovorans SPH-1 SMP-30/gluconolaconase/LRE domain-containing protein YP_001566611.1 6224125 D 398578 CDS YP_001566612.1 160901030 5751218 complement(6225063..6226625) 1 NC_010002.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 6226625 pgi 5751218 pgi Delftia acidovorans SPH-1 glucose-6-phosphate isomerase YP_001566612.1 6225063 R 398578 CDS YP_001566613.1 160901031 5751219 6226765..6228219 1 NC_010002.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 6228219 5751219 Daci_5599 Delftia acidovorans SPH-1 glucose-6-phosphate 1-dehydrogenase YP_001566613.1 6226765 D 398578 CDS YP_001566614.1 160901032 5751220 6228406..6229185 1 NC_010002.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 6229185 engB 5751220 engB Delftia acidovorans SPH-1 ribosome biogenesis GTP-binding protein YsxC YP_001566614.1 6228406 D 398578 CDS YP_001566615.1 160901033 5751221 6229231..6230142 1 NC_010002.1 PFAM: alpha/beta hydrolase fold; KEGG: ajs:Ajs_0708 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 6230142 5751221 Daci_5601 Delftia acidovorans SPH-1 alpha/beta hydrolase fold protein YP_001566615.1 6229231 D 398578 CDS YP_001566616.1 160901034 5751222 complement(6230136..6231002) 1 NC_010002.1 PFAM: lipid A biosynthesis acyltransferase; KEGG: ajs:Ajs_0707 lipid A biosynthesis acyltransferase; lipid A biosynthesis acyltransferase 6231002 5751222 Daci_5602 Delftia acidovorans SPH-1 lipid A biosynthesis acyltransferase YP_001566616.1 6230136 R 398578 CDS YP_001566617.1 160901035 5751223 complement(6230999..6231850) 1 NC_010002.1 PFAM: lipid A biosynthesis acyltransferase; KEGG: ajs:Ajs_0706 lipid A biosynthesis acyltransferase; lipid A biosynthesis acyltransferase 6231850 5751223 Daci_5603 Delftia acidovorans SPH-1 lipid A biosynthesis acyltransferase YP_001566617.1 6230999 R 398578 CDS YP_001566618.1 160901036 5751224 6231987..6233168 1 NC_010002.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 6233168 5751224 Daci_5604 Delftia acidovorans SPH-1 S-adenosylmethionine synthetase YP_001566618.1 6231987 D 398578 CDS YP_001566619.1 160901037 5751225 6233196..6234170 1 NC_010002.1 KEGG: ajs:Ajs_0702 hypothetical protein; hypothetical protein 6234170 5751225 Daci_5605 Delftia acidovorans SPH-1 hypothetical protein YP_001566619.1 6233196 D 398578 CDS YP_001566620.1 160901038 5751226 6234227..6235426 1 NC_010002.1 catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 6235426 5751226 Daci_5606 Delftia acidovorans SPH-1 nicotinate phosphoribosyltransferase YP_001566620.1 6234227 D 398578 CDS YP_001566621.1 160901039 5751227 6235476..6237176 1 NC_010002.1 KEGG: aav:Aave_0975 NAD+ synthetase; TIGRFAM: NAD+ synthetase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; NAD synthase; NAD+ synthetase 6237176 5751227 Daci_5607 Delftia acidovorans SPH-1 NAD+ synthetase YP_001566621.1 6235476 D 398578 CDS YP_001566622.1 160901040 5751228 6237205..6238341 1 NC_010002.1 TIGRFAM: cytidyltransferase-related domain protein; PFAM: NUDIX hydrolase; cytidylyltransferase; KEGG: ajs:Ajs_0701 cytidyltransferase-related domain; cytidyltransferase-like protein 6238341 5751228 Daci_5608 Delftia acidovorans SPH-1 cytidyltransferase-like protein YP_001566622.1 6237205 D 398578 CDS YP_001566623.1 160901041 5751229 6238414..6238905 1 NC_010002.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ajs:Ajs_4148 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 6238905 5751229 Daci_5609 Delftia acidovorans SPH-1 N-acetyltransferase GCN5 YP_001566623.1 6238414 D 398578 CDS YP_001566624.1 160901042 5751230 complement(6238926..6239990) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_3039 transcriptional regulator, LysR family; LysR family transcriptional regulator 6239990 5751230 Daci_5610 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001566624.1 6238926 R 398578 CDS YP_001566625.1 160901043 5751231 complement(6239953..6240441) 1 NC_010002.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: aav:Aave_3043 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 6240441 5751231 Daci_5611 Delftia acidovorans SPH-1 glyoxalase/bleomycin resistance protein/dioxygenase YP_001566625.1 6239953 R 398578 CDS YP_001566626.1 160901044 5751232 complement(6240553..6241224) 1 NC_010002.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: reh:H16_B1477 ABC-type transporter, permease component: MUT family; binding-protein-dependent transport system inner membrane protein 6241224 5751232 Daci_5612 Delftia acidovorans SPH-1 binding-protein-dependent transport system inner membrane protein YP_001566626.1 6240553 R 398578 CDS YP_001566627.1 160901045 5751233 complement(6241196..6242362) 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pmy:Pmen_2365 ABC transporter related; ABC transporter-like protein 6242362 5751233 Daci_5613 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001566627.1 6241196 R 398578 CDS YP_001566628.1 160901046 5751234 complement(6242376..6243188) 1 NC_010002.1 PFAM: NLPA lipoprotein; KEGG: reh:H16_B1479 ABC-type transporter, periplasmic component: MUT family; NLPA lipoprotein 6243188 5751234 Daci_5614 Delftia acidovorans SPH-1 NLPA lipoprotein YP_001566628.1 6242376 R 398578 CDS YP_001566629.1 160901047 5751235 complement(6243236..6244339) 1 NC_010002.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: asa:ASA_2346 2OG-Fe(II) oxygenase superfamily protein; 2OG-Fe(II) oxygenase 6244339 5751235 Daci_5615 Delftia acidovorans SPH-1 2OG-Fe(II) oxygenase YP_001566629.1 6243236 R 398578 CDS YP_001566630.1 160901048 5751236 complement(6244375..6245802) 1 NC_010002.1 KEGG: pap:PSPA7_5762 homocysteine synthase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; O-acetylhomoserine/O-acetylserine sulfhydrylase 6245802 5751236 Daci_5616 Delftia acidovorans SPH-1 O-acetylhomoserine/O-acetylserine sulfhydrylase YP_001566630.1 6244375 R 398578 CDS YP_001566631.1 160901049 5751237 6246021..6247127 1 NC_010002.1 KEGG: rme:Rmet_2219 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein 6247127 5751237 Daci_5617 Delftia acidovorans SPH-1 nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein YP_001566631.1 6246021 D 398578 CDS YP_001566632.1 160901050 5751238 6247124..6248179 1 NC_010002.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: reh:H16_B1867 ABC-type sulfonate transporter, permease component; binding-protein-dependent transport system inner membrane protein 6248179 5751238 Daci_5618 Delftia acidovorans SPH-1 binding-protein-dependent transport system inner membrane protein YP_001566632.1 6247124 D 398578 CDS YP_001566633.1 160901051 5751239 6248173..6249009 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rme:Rmet_2221 ABC transporter-related protein; ABC transporter-like protein 6249009 5751239 Daci_5619 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001566633.1 6248173 D 398578 CDS YP_001566634.1 160901052 5751240 6249022..6250218 1 NC_010002.1 KEGG: reh:H16_B1869 cytochrome c, mono-and diheme variants; cytochrome c, mono-and diheme variant-like protein 6250218 5751240 Daci_5620 Delftia acidovorans SPH-1 cytochrome c, mono-and diheme variant-like protein YP_001566634.1 6249022 D 398578 CDS YP_001566635.1 160901053 5751241 6250437..6250910 1 NC_010002.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: rle:RL2499 putative isoquinoline 1-oxidoreductase alpha subunit; 2Fe-2S iron-sulfur cluster-binding domain-containing protein 6250910 5751241 Daci_5621 Delftia acidovorans SPH-1 2Fe-2S iron-sulfur cluster-binding domain-containing protein YP_001566635.1 6250437 D 398578 CDS YP_001566636.1 160901054 5751242 6250925..6253192 1 NC_010002.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: pol:Bpro_3556 twin-arginine translocation pathway signal; aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit 6253192 5751242 Daci_5622 Delftia acidovorans SPH-1 aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit YP_001566636.1 6250925 D 398578 CDS YP_001566637.1 160901055 5751243 complement(6253241..6254212) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RS05493 probable transcription regulator protein; LysR family transcriptional regulator 6254212 5751243 Daci_5623 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001566637.1 6253241 R 398578 CDS YP_001566638.1 160901056 5751244 complement(6254297..6255187) 1 NC_010002.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: azo:azo0573 hypothetical protein; hypothetical protein 6255187 5751244 Daci_5624 Delftia acidovorans SPH-1 hypothetical protein YP_001566638.1 6254297 R 398578 CDS YP_001566639.1 160901057 5751245 complement(6255184..6256191) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ppu:PP_3605 transcriptional regulator, LysR family; LysR family transcriptional regulator 6256191 5751245 Daci_5625 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001566639.1 6255184 R 398578 CDS YP_001566640.1 160901058 5751246 complement(6256188..6257168) 1 NC_010002.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pau:PA14_29460 putative quinone oxidoreductase; alcohol dehydrogenase 6257168 5751246 Daci_5626 Delftia acidovorans SPH-1 alcohol dehydrogenase YP_001566640.1 6256188 R 398578 CDS YP_001566641.1 160901059 5751247 complement(6257300..6258418) 1 NC_010002.1 KEGG: vei:Veis_4644 porin, gram-negative type; porin 6258418 5751247 Daci_5627 Delftia acidovorans SPH-1 porin YP_001566641.1 6257300 R 398578 CDS YP_001566642.1 160901060 5751248 complement(6258517..6259515) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: reh:H16_B1445 probable extra-cytoplasmic solute receptor; hypothetical protein 6259515 5751248 Daci_5628 Delftia acidovorans SPH-1 hypothetical protein YP_001566642.1 6258517 R 398578 CDS YP_001566643.1 160901061 5751249 complement(6259562..6260647) 1 NC_010002.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: mag:amb2306 putative GTPase; cobalamin synthesis protein P47K 6260647 5751249 Daci_5629 Delftia acidovorans SPH-1 cobalamin synthesis protein P47K YP_001566643.1 6259562 R 398578 CDS YP_001566644.1 160901062 5751250 complement(6260644..6261009) 1 NC_010002.1 hypothetical protein 6261009 5751250 Daci_5630 Delftia acidovorans SPH-1 hypothetical protein YP_001566644.1 6260644 R 398578 CDS YP_001566645.1 160901063 5751251 complement(6261018..6262814) 1 NC_010002.1 PFAM: Hydantoinase B/oxoprolinase; KEGG: mta:Moth_1966 5-oxoprolinase (ATP-hydrolyzing); 5-oxoprolinase 6262814 5751251 Daci_5631 Delftia acidovorans SPH-1 5-oxoprolinase YP_001566645.1 6261018 R 398578 CDS YP_001566646.1 160901064 5751252 complement(6262811..6264907) 1 NC_010002.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: mta:Moth_1967 5-oxoprolinase (ATP-hydrolyzing); 5-oxoprolinase 6264907 5751252 Daci_5632 Delftia acidovorans SPH-1 5-oxoprolinase YP_001566646.1 6262811 R 398578 CDS YP_001566647.1 160901065 5751253 complement(6264922..6265782) 1 NC_010002.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bbt:BBta_5587 putative enzyme with isomerase/decarboxylase activity; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase 6265782 5751253 Daci_5633 Delftia acidovorans SPH-1 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase YP_001566647.1 6264922 R 398578 CDS YP_001566648.1 160901066 5751254 6265938..6266915 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bch:Bcen2424_3226 transcriptional regulator, LysR family; LysR family transcriptional regulator 6266915 5751254 Daci_5634 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001566648.1 6265938 D 398578 CDS YP_001566649.1 160901067 5751255 complement(6266909..6267880) 1 NC_010002.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: rsh:Rsph17029_3087 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 6267880 5751255 Daci_5635 Delftia acidovorans SPH-1 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_001566649.1 6266909 R 398578 CDS YP_001566650.1 160901068 5751256 complement(6267877..6268290) 1 NC_010002.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: atc:AGR_pAT_700 probable ring-cleaving dioxygenase PA0817; glyoxalase/bleomycin resistance protein/dioxygenase 6268290 5751256 Daci_5636 Delftia acidovorans SPH-1 glyoxalase/bleomycin resistance protein/dioxygenase YP_001566650.1 6267877 R 398578 CDS YP_001566651.1 160901069 5751257 6268422..6269276 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: vha:VIBHAR_06369 hypothetical protein; LysR family transcriptional regulator 6269276 5751257 Daci_5637 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001566651.1 6268422 D 398578 CDS YP_001566652.1 160901070 5751258 complement(6269425..6270333) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_3530 transcriptional regulator, LysR family; LysR family transcriptional regulator 6270333 5751258 Daci_5638 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001566652.1 6269425 R 398578 CDS YP_001566653.1 160901071 5751259 6270459..6271211 1 NC_010002.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bam:Bamb_3531 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase 6271211 5751259 Daci_5639 Delftia acidovorans SPH-1 short chain dehydrogenase YP_001566653.1 6270459 D 398578 CDS YP_001566654.1 160901072 5751260 6271386..6272063 1 NC_010002.1 PFAM: Glutathione S-transferase domain; KEGG: rso:RSc2594 probable glutathione-S-transferase protein; glutathione S-transferase domain-containing protein 6272063 5751260 Daci_5640 Delftia acidovorans SPH-1 glutathione S-transferase domain-containing protein YP_001566654.1 6271386 D 398578 CDS YP_001566655.1 160901073 5751261 complement(6272143..6273027) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: xau:Xaut_2927 transcriptional regulator, LysR family; LysR family transcriptional regulator 6273027 5751261 Daci_5641 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001566655.1 6272143 R 398578 CDS YP_001566656.1 160901074 5751262 6273161..6274435 1 NC_010002.1 PFAM: ribulose bisphosphate carboxylase large chain; KEGG: ppf:Pput_1846 ribulose-bisphosphate carboxylase; RuBisCO-like protein 6274435 5751262 Daci_5642 Delftia acidovorans SPH-1 RuBisCO-like protein YP_001566656.1 6273161 D 398578 CDS YP_001566657.1 160901075 5751263 6274444..6275853 1 NC_010002.1 KEGG: ppf:Pput_1847 type III effector Hrp-dependent outer; Hrp-dependent type III effector protein 6275853 5751263 Daci_5643 Delftia acidovorans SPH-1 Hrp-dependent type III effector protein YP_001566657.1 6274444 D 398578 CDS YP_001566658.1 160901076 5751264 6275872..6276891 1 NC_010002.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rpa:RPA2782 TrapT family, DctP subunit, C4-dicarboxylate periplasmic binding protein; TRAP dicarboxylate transporter subunit DctP 6276891 5751264 Daci_5644 Delftia acidovorans SPH-1 TRAP dicarboxylate transporter subunit DctP YP_001566658.1 6275872 D 398578 CDS YP_001566659.1 160901077 5751265 6276897..6278768 1 NC_010002.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rpe:RPE_2875 TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP C4-dicarboxylate transport system permease DctM 6278768 5751265 Daci_5645 Delftia acidovorans SPH-1 TRAP C4-dicarboxylate transport system permease DctM YP_001566659.1 6276897 D 398578 CDS YP_001566660.1 160901078 5751266 6278798..6279568 1 NC_010002.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ppf:Pput_1844 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 6279568 5751266 Daci_5646 Delftia acidovorans SPH-1 short-chain dehydrogenase/reductase SDR YP_001566660.1 6278798 D 398578 CDS YP_001566661.1 160901079 5751268 6279977..6281395 1 NC_010002.1 PFAM: protein of unknown function UPF0027; KEGG: bur:Bcep18194_B0923 hypothetical protein; hypothetical protein 6281395 5751268 Daci_5648 Delftia acidovorans SPH-1 hypothetical protein YP_001566661.1 6279977 D 398578 CDS YP_001566662.1 160901080 5751269 complement(6281411..6283372) 1 NC_010002.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pol:Bpro_4569 sigma54 specific transcriptional regulator with GAF sensor, fis family; Fis family GAF modulated sigma54 specific transcriptional regulator 6283372 5751269 Daci_5649 Delftia acidovorans SPH-1 Fis family GAF modulated sigma54 specific transcriptional regulator YP_001566662.1 6281411 R 398578 CDS YP_001566663.1 160901081 5751270 6283695..6285218 1 NC_010002.1 PFAM: Aldehyde Dehydrogenase_; KEGG: mpt:Mpe_A0599 aldehyde dehydrogenase (NAD+); aldehyde dehydrogenase 6285218 5751270 Daci_5650 Delftia acidovorans SPH-1 aldehyde dehydrogenase YP_001566663.1 6283695 D 398578 CDS YP_001566664.1 160901082 5751271 6285286..6285660 1 NC_010002.1 PFAM: protein of unknown function DUF779; KEGG: mpt:Mpe_A0598 hypothetical protein; hypothetical protein 6285660 5751271 Daci_5651 Delftia acidovorans SPH-1 hypothetical protein YP_001566664.1 6285286 D 398578 CDS YP_001566665.1 160901083 5751272 complement(6285679..6286266) 1 NC_010002.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: nar:Saro_2315 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 6286266 5751272 Daci_5652 Delftia acidovorans SPH-1 alkyl hydroperoxide reductase YP_001566665.1 6285679 R 398578 CDS YP_001566666.1 160901084 5751273 complement(6286343..6289411) 1 NC_010002.1 PFAM: acriflavin resistance protein; KEGG: pol:Bpro_3446 acriflavin resistance protein; acriflavin resistance protein 6289411 5751273 Daci_5653 Delftia acidovorans SPH-1 acriflavin resistance protein YP_001566666.1 6286343 R 398578 CDS YP_001566667.1 160901085 5751274 complement(6289404..6290591) 1 NC_010002.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rso:RSc3206 probable transport lipoprotein; RND family efflux transporter MFP subunit 6290591 5751274 Daci_5654 Delftia acidovorans SPH-1 RND family efflux transporter MFP subunit YP_001566667.1 6289404 R 398578 CDS YP_001566668.1 160901086 5751275 complement(6290668..6291285) 1 NC_010002.1 PFAM: regulatory protein TetR; KEGG: pol:Bpro_3444 transcriptional regulator, TetR family; TetR family transcriptional regulator 6291285 5751275 Daci_5655 Delftia acidovorans SPH-1 TetR family transcriptional regulator YP_001566668.1 6290668 R 398578 CDS YP_001566669.1 160901087 5751276 6291375..6292880 1 NC_010002.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: pol:Bpro_3443 RND efflux system, outer membrane lipoprotein, NodT; RND efflux system outer membrane lipoprotein 6292880 5751276 Daci_5656 Delftia acidovorans SPH-1 RND efflux system outer membrane lipoprotein YP_001566669.1 6291375 D 398578 CDS YP_001566670.1 160901088 5751277 6293020..6293346 1 NC_010002.1 KEGG: net:Neut_0047 hypothetical protein; hypothetical protein 6293346 5751277 Daci_5657 Delftia acidovorans SPH-1 hypothetical protein YP_001566670.1 6293020 D 398578 CDS YP_001566671.1 160901089 5751278 complement(6293418..6293885) 1 NC_010002.1 PFAM: protein of unknown function DUF1348; KEGG: bam:Bamb_5951 protein of unknown function DUF1348; hypothetical protein 6293885 5751278 Daci_5658 Delftia acidovorans SPH-1 hypothetical protein YP_001566671.1 6293418 R 398578 CDS YP_001566672.1 160901090 5751279 6293971..6294555 1 NC_010002.1 PFAM: regulatory protein TetR; KEGG: pol:Bpro_2654 transcriptional regulator, TetR family; TetR family transcriptional regulator 6294555 5751279 Daci_5659 Delftia acidovorans SPH-1 TetR family transcriptional regulator YP_001566672.1 6293971 D 398578 CDS YP_001566673.1 160901091 5751280 6294741..6295031 1 NC_010002.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 6295031 groES 5751280 groES Delftia acidovorans SPH-1 co-chaperonin GroES YP_001566673.1 6294741 D 398578 CDS YP_001566674.1 160901092 5751281 6295078..6296721 1 NC_010002.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL 6296721 groEL 5751281 groEL Delftia acidovorans SPH-1 chaperonin GroEL YP_001566674.1 6295078 D 398578 CDS YP_001566675.1 160901093 5751282 complement(6296831..6298108) 1 NC_010002.1 PFAM: aminotransferase class I and II; KEGG: bxe:Bxe_B2576 putative aminotransferase; GntR family transcriptional regulator 6298108 5751282 Daci_5662 Delftia acidovorans SPH-1 GntR family transcriptional regulator YP_001566675.1 6296831 R 398578 CDS YP_001566676.1 160901094 5751283 complement(6298220..6299635) 1 NC_010002.1 PFAM: protein of unknown function DUF1338; KEGG: rle:RL4587 hypothetical protein; hypothetical protein 6299635 5751283 Daci_5663 Delftia acidovorans SPH-1 hypothetical protein YP_001566676.1 6298220 R 398578 CDS YP_001566677.1 160901095 5751284 6299802..6300722 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ret:RHE_CH04052 probable transcriptional regulator protein, LysR family; LysR family transcriptional regulator 6300722 5751284 Daci_5664 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001566677.1 6299802 D 398578 CDS YP_001566678.1 160901096 5751285 complement(6300697..6301659) 1 NC_010002.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: vei:Veis_4296 cobalamin synthesis protein, P47K; cobalamin synthesis protein P47K 6301659 5751285 Daci_5665 Delftia acidovorans SPH-1 cobalamin synthesis protein P47K YP_001566678.1 6300697 R 398578 CDS YP_001566679.1 160901097 5751286 complement(6301661..6303325) 1 NC_010002.1 PFAM: Amidohydrolase 3; KEGG: vei:Veis_4295 amidohydrolase 3; amidohydrolase 3 6303325 5751286 Daci_5666 Delftia acidovorans SPH-1 amidohydrolase 3 YP_001566679.1 6301661 R 398578 CDS YP_001566680.1 160901098 5751287 complement(6303345..6304367) 1 NC_010002.1 KEGG: vei:Veis_4294 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 6304367 5751287 Daci_5667 Delftia acidovorans SPH-1 oligopeptide/dipeptide ABC transporter ATPase YP_001566680.1 6303345 R 398578 CDS YP_001566681.1 160901099 5751288 complement(6304364..6305392) 1 NC_010002.1 KEGG: vei:Veis_4293 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 6305392 5751288 Daci_5668 Delftia acidovorans SPH-1 oligopeptide/dipeptide ABC transporter ATPase YP_001566681.1 6304364 R 398578 CDS YP_001566682.1 160901100 5751289 complement(6305392..6306300) 1 NC_010002.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_4292 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 6306300 5751289 Daci_5669 Delftia acidovorans SPH-1 binding-protein-dependent transport system inner membrane protein YP_001566682.1 6305392 R 398578 CDS YP_001566683.1 160901101 5751290 complement(6306305..6307282) 1 NC_010002.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_4291 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 6307282 5751290 Daci_5670 Delftia acidovorans SPH-1 binding-protein-dependent transport system inner membrane protein YP_001566683.1 6306305 R 398578 CDS YP_001566684.1 160901102 5751291 complement(6307299..6308894) 1 NC_010002.1 PFAM: extracellular solute-binding protein family 5; KEGG: vei:Veis_4290 extracellular solute-binding protein, family 5; extracellular solute-binding protein 6308894 5751291 Daci_5671 Delftia acidovorans SPH-1 extracellular solute-binding protein YP_001566684.1 6307299 R 398578 CDS YP_001566685.1 160901103 5751292 6309137..6310663 1 NC_010002.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: vei:Veis_4287 putative transcriptional regulator, GntR family; transcriptional regulator 6310663 5751292 Daci_5672 Delftia acidovorans SPH-1 transcriptional regulator YP_001566685.1 6309137 D 398578 CDS YP_001566686.1 160901104 5751293 complement(6310648..6311547) 1 NC_010002.1 PFAM: extracellular solute-binding protein family 3; KEGG: vei:Veis_0788 extracellular solute-binding protein, family 3; extracellular solute-binding protein 6311547 5751293 Daci_5673 Delftia acidovorans SPH-1 extracellular solute-binding protein YP_001566686.1 6310648 R 398578 CDS YP_001566687.1 160901105 5751294 complement(6311779..6313401) 1 NC_010002.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 6313401 pgi 5751294 pgi Delftia acidovorans SPH-1 glucose-6-phosphate isomerase YP_001566687.1 6311779 R 398578 CDS YP_001566688.1 160901106 5751295 complement(6313406..6314359) 1 NC_010002.1 KEGG: ajs:Ajs_0696 transaldolase; TIGRFAM: transaldolase; PFAM: Transaldolase; transaldolase B 6314359 5751295 Daci_5675 Delftia acidovorans SPH-1 transaldolase B YP_001566688.1 6313406 R 398578 CDS YP_001566689.1 160901107 5751296 6314442..6315413 1 NC_010002.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: ajs:Ajs_0694 transcriptional regulator, RpiR family; RpiR family transcriptional regulator 6315413 5751296 Daci_5676 Delftia acidovorans SPH-1 RpiR family transcriptional regulator YP_001566689.1 6314442 D 398578 CDS YP_001566690.1 160901108 5751297 complement(6315441..6316928) 1 NC_010002.1 TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase; KEGG: pfl:PFL_3434 3-oxoacyl-(acyl-carrier-protein) synthase II; 3-oxoacyl-(acyl-carrier-protein) synthase 2 6316928 5751297 Daci_5677 Delftia acidovorans SPH-1 3-oxoacyl-(acyl-carrier-protein) synthase 2 YP_001566690.1 6315441 R 398578 CDS YP_001566691.1 160901109 5751298 6316973..6317575 1 NC_010002.1 PFAM: regulatory protein TetR; KEGG: ajs:Ajs_2441 transcriptional regulator, TetR family; TetR family transcriptional regulator 6317575 5751298 Daci_5678 Delftia acidovorans SPH-1 TetR family transcriptional regulator YP_001566691.1 6316973 D 398578 CDS YP_001566692.1 160901110 5751299 complement(6317591..6318817) 1 NC_010002.1 KEGG: ajs:Ajs_0687 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 6318817 5751299 Daci_5679 Delftia acidovorans SPH-1 amidohydrolase YP_001566692.1 6317591 R 398578 CDS YP_001566693.1 160901111 5751300 complement(6318952..6319530) 1 NC_010002.1 KEGG: aav:Aave_0933 porin, gram-negative type; porin 6319530 5751300 Daci_5680 Delftia acidovorans SPH-1 porin YP_001566693.1 6318952 R 398578 CDS YP_001566694.1 160901112 5751301 complement(6319561..6320100) 1 NC_010002.1 KEGG: aav:Aave_0933 porin, gram-negative type; porin 6320100 5751301 Daci_5681 Delftia acidovorans SPH-1 porin YP_001566694.1 6319561 R 398578 CDS YP_001566695.1 160901113 5751302 complement(6320283..6321338) 1 NC_010002.1 KEGG: ajs:Ajs_0682 porin, gram-negative type; porin 6321338 5751302 Daci_5682 Delftia acidovorans SPH-1 porin YP_001566695.1 6320283 R 398578 CDS YP_001566696.1 160901114 5751303 6321669..6322286 1 NC_010002.1 KEGG: ajs:Ajs_0681 putative ubiquinone biosynthesis protein; putative ubiquinone biosynthesis protein 6322286 5751303 Daci_5683 Delftia acidovorans SPH-1 putative ubiquinone biosynthesis protein YP_001566696.1 6321669 D 398578 CDS YP_001566697.1 160901115 5751304 complement(6322395..6322847) 1 NC_010002.1 PFAM: OsmC family protein; KEGG: aav:Aave_0930 OsmC family protein; OsmC family protein 6322847 5751304 Daci_5684 Delftia acidovorans SPH-1 OsmC family protein YP_001566697.1 6322395 R 398578 CDS YP_001566698.1 160901116 5751305 6323215..6324768 1 NC_010002.1 threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway; threonine dehydratase 6324768 5751305 Daci_5685 Delftia acidovorans SPH-1 threonine dehydratase YP_001566698.1 6323215 D 398578 CDS YP_001566699.1 160901117 5751306 6324799..6325611 1 NC_010002.1 PFAM: cobalamin-5-phosphate synthase CobS; KEGG: ajs:Ajs_0678 cobalamin-5-phosphate synthase CobS; cobalamin-5-phosphate synthase CobS 6325611 5751306 Daci_5686 Delftia acidovorans SPH-1 cobalamin-5-phosphate synthase CobS YP_001566699.1 6324799 D 398578 CDS YP_001566700.1 160901118 5751307 6325608..6326210 1 NC_010002.1 PFAM: Phosphoglycerate mutase; KEGG: aav:Aave_0927 phosphoglycerate mutase; phosphoglycerate mutase 6326210 5751307 Daci_5687 Delftia acidovorans SPH-1 phosphoglycerate mutase YP_001566700.1 6325608 D 398578 CDS YP_001566701.1 160901119 5751308 complement(6326217..6326690) 1 NC_010002.1 KEGG: aav:Aave_0926 hypothetical protein; hypothetical protein 6326690 5751308 Daci_5688 Delftia acidovorans SPH-1 hypothetical protein YP_001566701.1 6326217 R 398578 CDS YP_001566702.1 160901120 5751309 6326713..6327189 1 NC_010002.1 TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: aav:Aave_0925 general secretion pathway protein G; general secretion pathway protein G 6327189 5751309 Daci_5689 Delftia acidovorans SPH-1 general secretion pathway protein G YP_001566702.1 6326713 D 398578 CDS YP_001566703.1 160901121 5751310 6327164..6327727 1 NC_010002.1 TIGRFAM: general secretion pathway protein H; KEGG: vei:Veis_3522 general secretion pathway protein H; general secretion pathway protein H 6327727 5751310 Daci_5690 Delftia acidovorans SPH-1 general secretion pathway protein H YP_001566703.1 6327164 D 398578 CDS YP_001566704.1 160901122 5751311 6327799..6328122 1 NC_010002.1 PFAM: type II secretion system protein I/J; KEGG: vei:Veis_3523 general secretion pathway protein I; type II secretion system protein I/J 6328122 5751311 Daci_5691 Delftia acidovorans SPH-1 type II secretion system protein I/J YP_001566704.1 6327799 D 398578 CDS YP_001566705.1 160901123 5751312 6328129..6328830 1 NC_010002.1 KEGG: vei:Veis_3524 hypothetical protein; hypothetical protein 6328830 5751312 Daci_5692 Delftia acidovorans SPH-1 hypothetical protein YP_001566705.1 6328129 D 398578 CDS YP_001566706.1 160901124 5751313 6328827..6329804 1 NC_010002.1 PFAM: General secretion pathway protein K; KEGG: ajs:Ajs_0671 general secretion pathway protein K; general secretion pathway protein K 6329804 5751313 Daci_5693 Delftia acidovorans SPH-1 general secretion pathway protein K YP_001566706.1 6328827 D 398578 CDS YP_001566707.1 160901125 5751314 6329801..6331093 1 NC_010002.1 PFAM: General secretion pathway L; KEGG: aav:Aave_0920 hypothetical protein; general secretion pathway L 6331093 5751314 Daci_5694 Delftia acidovorans SPH-1 general secretion pathway L YP_001566707.1 6329801 D 398578 CDS YP_001566708.1 160901126 5751315 6331090..6331650 1 NC_010002.1 KEGG: ajs:Ajs_0669 hypothetical protein; hypothetical protein 6331650 5751315 Daci_5695 Delftia acidovorans SPH-1 hypothetical protein YP_001566708.1 6331090 D 398578 CDS YP_001566709.1 160901127 5751316 6331653..6332456 1 NC_010002.1 KEGG: vei:Veis_3528 putative general secretory pathway N transmembrane protein; putative general secretory pathway N transmembrane protein 6332456 5751316 Daci_5696 Delftia acidovorans SPH-1 putative general secretory pathway N transmembrane protein YP_001566709.1 6331653 D 398578 CDS YP_001566710.1 160901128 5751317 6332460..6334823 1 NC_010002.1 TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: aav:Aave_0917 general secretion pathway protein D; general secretion pathway protein D 6334823 5751317 Daci_5697 Delftia acidovorans SPH-1 general secretion pathway protein D YP_001566710.1 6332460 D 398578 CDS YP_001566711.1 160901129 5751318 6334838..6336199 1 NC_010002.1 KEGG: aav:Aave_0916 general secretory pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase; general secretory pathway protein E 6336199 5751318 Daci_5698 Delftia acidovorans SPH-1 general secretory pathway protein E YP_001566711.1 6334838 D 398578 CDS YP_001566712.1 160901130 5751319 6336254..6336547 1 NC_010002.1 hypothetical protein 6336547 5751319 Daci_5699 Delftia acidovorans SPH-1 hypothetical protein YP_001566712.1 6336254 D 398578 CDS YP_001566713.1 160901131 5751320 6336633..6337634 1 NC_010002.1 PFAM: luciferase family protein; KEGG: ajs:Ajs_0664 luciferase family protein; luciferase family protein 6337634 5751320 Daci_5700 Delftia acidovorans SPH-1 luciferase family protein YP_001566713.1 6336633 D 398578 CDS YP_001566714.1 160901132 5751321 6337639..6338328 1 NC_010002.1 PFAM: Helix-turn-helix type 11 domain protein; KEGG: aav:Aave_2089 helix-turn-helix, type 11 domain protein; helix-turn-helix type 11 domain-containing protein 6338328 5751321 Daci_5701 Delftia acidovorans SPH-1 helix-turn-helix type 11 domain-containing protein YP_001566714.1 6337639 D 398578 CDS YP_001566715.1 160901133 5751322 6338417..6339061 1 NC_010002.1 PFAM: Glutathione S-transferase domain; KEGG: xac:XAC1299 glutathione S-transferase; glutathione S-transferase domain-containing protein 6339061 5751322 Daci_5702 Delftia acidovorans SPH-1 glutathione S-transferase domain-containing protein YP_001566715.1 6338417 D 398578 CDS YP_001566716.1 160901134 5751323 6339206..6340432 1 NC_010002.1 TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: ajs:Ajs_0663 general secretion pathway protein F; general secretion pathway protein F 6340432 5751323 Daci_5703 Delftia acidovorans SPH-1 general secretion pathway protein F YP_001566716.1 6339206 D 398578 CDS YP_001566717.1 160901135 5751324 6340449..6341369 1 NC_010002.1 PFAM: 5-nucleotidase; KEGG: ajs:Ajs_0662 5-nucleotidase; 5'-nucleotidase 6341369 5751324 Daci_5704 Delftia acidovorans SPH-1 5'-nucleotidase YP_001566717.1 6340449 D 398578 CDS YP_001566718.1 160901136 5751325 6341447..6341911 1 NC_010002.1 PFAM: Calcium-binding EF-hand-containing protein; KEGG: aav:Aave_3976 putative signal transduction protein with EFhand domain; calcium-binding EF-hand-containing protein 6341911 5751325 Daci_5705 Delftia acidovorans SPH-1 calcium-binding EF-hand-containing protein YP_001566718.1 6341447 D 398578 CDS YP_001566719.1 160901137 5751326 complement(6341936..6342370) 1 NC_010002.1 KEGG: ajs:Ajs_0660 hypothetical protein; hypothetical protein 6342370 5751326 Daci_5706 Delftia acidovorans SPH-1 hypothetical protein YP_001566719.1 6341936 R 398578 CDS YP_001566720.1 160901138 5751327 complement(6342526..6343029) 1 NC_010002.1 PFAM: Domain of unknown function DUF1854; KEGG: aav:Aave_3978 hypothetical protein; hypothetical protein 6343029 5751327 Daci_5707 Delftia acidovorans SPH-1 hypothetical protein YP_001566720.1 6342526 R 398578 CDS YP_001566721.1 160901139 5751328 complement(6343033..6345327) 1 NC_010002.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_3979 ABC transporter-related protein; ABC transporter-like protein 6345327 5751328 Daci_5708 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001566721.1 6343033 R 398578 CDS YP_001566722.1 160901140 5751329 6345546..6347738 1 NC_010002.1 catalyze the formation of cyanophycin which may act to store excess nitrogen; cyanophycin synthetase 6347738 5751329 Daci_5709 Delftia acidovorans SPH-1 cyanophycin synthetase YP_001566722.1 6345546 D 398578 CDS YP_001566723.1 160901141 5751330 6347757..6350384 1 NC_010002.1 catalyze the formation of cyanophycin which may act to store excess nitrogen; cyanophycin synthetase 6350384 5751330 Daci_5710 Delftia acidovorans SPH-1 cyanophycin synthetase YP_001566723.1 6347757 D 398578 CDS YP_001566724.1 160901142 5751331 6350501..6351010 1 NC_010002.1 PFAM: CreA family protein; KEGG: pna:Pnap_2219 CreA family protein; CreA family protein 6351010 5751331 Daci_5711 Delftia acidovorans SPH-1 CreA family protein YP_001566724.1 6350501 D 398578 CDS YP_001566725.1 160901143 5751332 complement(6351017..6351922) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_2818 transcriptional regulator, LysR family; LysR family transcriptional regulator 6351922 5751332 Daci_5712 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001566725.1 6351017 R 398578 CDS YP_001566726.1 160901144 5751333 6352055..6353140 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_2819 conserved hypothetical protein 698; hypothetical protein 6353140 5751333 Daci_5713 Delftia acidovorans SPH-1 hypothetical protein YP_001566726.1 6352055 D 398578 CDS YP_001566727.1 160901145 5751334 6353296..6353757 1 NC_010002.1 PFAM: regulatory protein MarR; KEGG: xau:Xaut_1307 transcriptional regulator, MarR family; MarR family transcriptional regulator 6353757 5751334 Daci_5714 Delftia acidovorans SPH-1 MarR family transcriptional regulator YP_001566727.1 6353296 D 398578 CDS YP_001566728.1 160901146 5751335 6353754..6355739 1 NC_010002.1 KEGG: xau:Xaut_1306 fusaric acid resistance protein conserved region; fusaric acid resistance protein region 6355739 5751335 Daci_5715 Delftia acidovorans SPH-1 fusaric acid resistance protein region YP_001566728.1 6353754 D 398578 CDS YP_001566729.1 160901147 5751336 6355821..6356354 1 NC_010002.1 KEGG: reh:H16_B2397 acetyltransferase; acetyltransferase 6356354 5751336 Daci_5716 Delftia acidovorans SPH-1 acetyltransferase YP_001566729.1 6355821 D 398578 CDS YP_001566730.1 160901148 5751337 complement(6356412..6357854) 1 NC_010002.1 PFAM: Aldehyde Dehydrogenase_; KEGG: bam:Bamb_3830 succinate-semialdehyde dehydrogenase (NAD(P)(+)); aldehyde dehydrogenase 6357854 5751337 Daci_5717 Delftia acidovorans SPH-1 aldehyde dehydrogenase YP_001566730.1 6356412 R 398578 CDS YP_001566731.1 160901149 5751338 6357890..6359971 1 NC_010002.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: aav:Aave_4238 hypothetical protein; peptidase S1 and S6 chymotrypsin/Hap 6359971 5751338 Daci_5718 Delftia acidovorans SPH-1 peptidase S1 and S6 chymotrypsin/Hap YP_001566731.1 6357890 D 398578 CDS YP_001566732.1 160901150 5751339 complement(6360049..6362904) 1 NC_010002.1 KEGG: ajs:Ajs_3698 DnaK-related protein; DnaK-like protein 6362904 5751339 Daci_5719 Delftia acidovorans SPH-1 DnaK-like protein YP_001566732.1 6360049 R 398578 CDS YP_001566733.1 160901151 5751340 complement(6362964..6364829) 1 NC_010002.1 KEGG: ajs:Ajs_3696 putative heat-shock chaperone protein; putative heat-shock chaperone protein 6364829 5751340 Daci_5720 Delftia acidovorans SPH-1 putative heat-shock chaperone protein YP_001566733.1 6362964 R 398578 CDS YP_001566734.1 160901152 5751341 complement(6364832..6365809) 1 NC_010002.1 KEGG: ajs:Ajs_3695 hypothetical protein; hypothetical protein 6365809 5751341 Daci_5721 Delftia acidovorans SPH-1 hypothetical protein YP_001566734.1 6364832 R 398578 CDS YP_001566735.1 160901153 5751342 6366017..6366892 1 NC_010002.1 KEGG: mms:mma_1045 hypothetical protein; hypothetical protein 6366892 5751342 Daci_5722 Delftia acidovorans SPH-1 hypothetical protein YP_001566735.1 6366017 D 398578 CDS YP_001566736.1 160901154 5751343 6366993..6367697 1 NC_010002.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 6367697 5751343 Daci_5723 Delftia acidovorans SPH-1 riboflavin synthase subunit alpha YP_001566736.1 6366993 D 398578 CDS YP_001566737.1 160901155 5751344 complement(6367711..6370230) 1 NC_010002.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper ion binding protein; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: bpe:BP2860 probable cation-transporting ATPase; heavy metal translocating P-type ATPase 6370230 5751344 Daci_5724 Delftia acidovorans SPH-1 heavy metal translocating P-type ATPase YP_001566737.1 6367711 R 398578 CDS YP_001566738.1 160901156 5751345 6370271..6372289 1 NC_010002.1 PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: aav:Aave_4022 5'-nucleotidase; 5'-nucleotidase domain-containing protein 6372289 5751345 Daci_5725 Delftia acidovorans SPH-1 5'-nucleotidase domain-containing protein YP_001566738.1 6370271 D 398578 CDS YP_001566739.1 160901157 5751346 complement(6373012..6374739) 1 NC_010002.1 PFAM: biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: reu:Reut_A2451 biotin/lipoyl attachment:carbamoyl-phosphate synthase L chain, ATP-binding:carbamoyl-phosphate synthetase large chain, N-terminal:biotin carboxylase, C-terminal; carbamoyl-phosphate synthase subunit L 6374739 5751346 Daci_5726 Delftia acidovorans SPH-1 carbamoyl-phosphate synthase subunit L YP_001566739.1 6373012 R 398578 CDS YP_001566740.1 160901158 5751347 complement(6374789..6376384) 1 NC_010002.1 PFAM: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; KEGG: reh:H16_B1758 allophanate hydrolase; allophanate hydrolase subunit 2 6376384 5751347 Daci_5727 Delftia acidovorans SPH-1 allophanate hydrolase subunit 2 YP_001566740.1 6374789 R 398578 CDS YP_001566741.1 160901159 5751348 complement(6376394..6377152) 1 NC_010002.1 PFAM: LamB/YcsF family protein; KEGG: rfr:Rfer_0870 LamB/YcsF; LamB/YcsF family protein 6377152 5751348 Daci_5728 Delftia acidovorans SPH-1 LamB/YcsF family protein YP_001566741.1 6376394 R 398578 CDS YP_001566742.1 160901160 5751349 complement(6377187..6377855) 1 NC_010002.1 KEGG: rfr:Rfer_0871 pyrrolidone-carboxylate peptidase; TIGRFAM: pyrrolidone-carboxylate peptidase; PFAM: peptidase C15 pyroglutamyl peptidase I; pyrrolidone-carboxylate peptidase 6377855 5751349 Daci_5729 Delftia acidovorans SPH-1 pyrrolidone-carboxylate peptidase YP_001566742.1 6377187 R 398578 CDS YP_001566743.1 160901161 5751350 complement(6377872..6378825) 1 NC_010002.1 PFAM: protein of unknown function DUF979; KEGG: rfr:Rfer_0872 protein of unknown function DUF979; hypothetical protein 6378825 5751350 Daci_5730 Delftia acidovorans SPH-1 hypothetical protein YP_001566743.1 6377872 R 398578 CDS YP_001566744.1 160901162 5751352 complement(6378827..6379576) 1 NC_010002.1 PFAM: protein of unknown function DUF969; KEGG: rfr:Rfer_0873 protein of unknown function DUF969; hypothetical protein 6379576 5751352 Daci_5731 Delftia acidovorans SPH-1 hypothetical protein YP_001566744.1 6378827 R 398578 CDS YP_001566745.1 160901163 5751353 6379933..6381144 1 NC_010002.1 PFAM: Extracellular ligand-binding receptor; KEGG: ajs:Ajs_0045 extracellular ligand-binding receptor; extracellular ligand-binding receptor 6381144 5751353 Daci_5732 Delftia acidovorans SPH-1 extracellular ligand-binding receptor YP_001566745.1 6379933 D 398578 CDS YP_001566746.1 160901164 5751354 6381227..6382252 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: reh:H16_B1440 probable extra-cytoplasmic solute receptor; hypothetical protein 6382252 5751354 Daci_5733 Delftia acidovorans SPH-1 hypothetical protein YP_001566746.1 6381227 D 398578 CDS YP_001566747.1 160901165 5751355 6382253..6383308 1 NC_010002.1 PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: bja:bll4016 probable L-allo-threonine aldolase; aromatic amino acid beta-eliminating lyase/threonine aldolase 6383308 5751355 Daci_5734 Delftia acidovorans SPH-1 aromatic amino acid beta-eliminating lyase/threonine aldolase YP_001566747.1 6382253 D 398578 CDS YP_001566748.1 160901166 5751356 6383380..6384054 1 NC_010002.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: reh:H16_B1761 transcriptonal regulator, GntR-family; GntR family transcriptional regulator 6384054 5751356 Daci_5735 Delftia acidovorans SPH-1 GntR family transcriptional regulator YP_001566748.1 6383380 D 398578 CDS YP_001566749.1 160901167 5751357 complement(6384232..6384669) 1 NC_010002.1 PFAM: DoxX family protein; KEGG: pfl:PFL_2372 SURF4 domain protein; DoxX family protein 6384669 5751357 Daci_5736 Delftia acidovorans SPH-1 DoxX family protein YP_001566749.1 6384232 R 398578 CDS YP_001566750.1 160901168 5751358 complement(6384674..6385033) 1 NC_010002.1 KEGG: net:Neut_0038 hypothetical protein; hypothetical protein 6385033 5751358 Daci_5737 Delftia acidovorans SPH-1 hypothetical protein YP_001566750.1 6384674 R 398578 CDS YP_001566751.1 160901169 5751359 complement(6385184..6386845) 1 NC_010002.1 PFAM: ferredoxin; adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: smd:Smed_2364 putative adenylate/guanylate cyclase; adenylate/guanylate cyclase 6386845 5751359 Daci_5738 Delftia acidovorans SPH-1 adenylate/guanylate cyclase YP_001566751.1 6385184 R 398578 CDS YP_001566752.1 160901170 5751360 6386972..6387679 1 NC_010002.1 PFAM: cyclic nucleotide-binding; KEGG: neu:NE1296 cyclic nucleotide-binding domain:cAMP-dependent protein kinase; cyclic nucleotide-binding protein 6387679 5751360 Daci_5739 Delftia acidovorans SPH-1 cyclic nucleotide-binding protein YP_001566752.1 6386972 D 398578 CDS YP_001566753.1 160901171 5751361 complement(6387676..6389337) 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: reh:H16_A1931 ABC-type transporter, duplicated ATPase domains:drug RA1 family; ABC transporter-like protein 6389337 5751361 Daci_5740 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001566753.1 6387676 R 398578 CDS YP_001566754.1 160901172 5751362 complement(6389661..6392801) 1 NC_010002.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: rso:RSp0312 probable multidrug efflux system transmembrane protein; hydrophobe/amphiphile efflux-1 family protein 6392801 5751362 Daci_5741 Delftia acidovorans SPH-1 hydrophobe/amphiphile efflux-1 family protein YP_001566754.1 6389661 R 398578 CDS YP_001566755.1 160901173 5751363 6392891..6393919 1 NC_010002.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rso:RS05454 probable two component response regulator transcription regulator protein; two component transcriptional regulator 6393919 5751363 Daci_5742 Delftia acidovorans SPH-1 two component transcriptional regulator YP_001566755.1 6392891 D 398578 CDS YP_001566756.1 160901174 5751364 6393916..6394989 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rru:Rru_A2930 periplasmic sensor signal transduction histidine kinase; histidine kinase 6394989 5751364 Daci_5743 Delftia acidovorans SPH-1 histidine kinase YP_001566756.1 6393916 D 398578 CDS YP_001566757.1 160901175 5751365 complement(6395008..6395469) 1 NC_010002.1 KEGG: bxe:Bxe_B1644 hypothetical protein; hypothetical protein 6395469 5751365 Daci_5744 Delftia acidovorans SPH-1 hypothetical protein YP_001566757.1 6395008 R 398578 CDS YP_001566758.1 160901176 5751366 complement(6395679..6396839) 1 NC_010002.1 KEGG: bvi:Bcep1808_1603 magnesium chelatase; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; magnesium chelatase 6396839 5751366 Daci_5745 Delftia acidovorans SPH-1 magnesium chelatase YP_001566758.1 6395679 R 398578 CDS YP_001566759.1 160901177 5751367 complement(6396836..6400657) 1 NC_010002.1 KEGG: bvi:Bcep1808_1602 cobaltochelatase, CobN subunit; TIGRFAM: cobaltochelatase, CobN subunit; PFAM: CobN/magnesium chelatase; cobaltochelatase subunit CobN 6400657 5751367 Daci_5746 Delftia acidovorans SPH-1 cobaltochelatase subunit CobN YP_001566759.1 6396836 R 398578 CDS YP_001566760.1 160901178 5751368 complement(6400687..6401736) 1 NC_010002.1 TIGRFAM: cobalamin biosynthesis protein CobW; PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: pae:PA2945 cobalamin biosynthesis protein CobW; cobalamin biosynthesis protein CobW 6401736 5751368 Daci_5747 Delftia acidovorans SPH-1 cobalamin biosynthesis protein CobW YP_001566760.1 6400687 R 398578 CDS YP_001566761.1 160901179 5751369 complement(6401764..6402786) 1 NC_010002.1 PFAM: luciferase family protein; KEGG: nha:Nham_0958 luciferase-like; luciferase family protein 6402786 5751369 Daci_5748 Delftia acidovorans SPH-1 luciferase family protein YP_001566761.1 6401764 R 398578 CDS YP_001566762.1 160901180 5751370 complement(6402791..6403558) 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eli:ELI_07945 ferrichrome ABC transporter ATP-binding protein; ABC transporter-like protein 6403558 5751370 Daci_5749 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001566762.1 6402791 R 398578 CDS YP_001566763.1 160901181 5751371 complement(6403555..6404577) 1 NC_010002.1 PFAM: transport system permease protein; KEGG: mes:Meso_1443 transport system permease protein; transport system permease 6404577 5751371 Daci_5750 Delftia acidovorans SPH-1 transport system permease YP_001566763.1 6403555 R 398578 CDS YP_001566764.1 160901182 5751372 complement(6404574..6405515) 1 NC_010002.1 PFAM: periplasmic binding protein; KEGG: rxy:Rxyl_2468 periplasmic binding protein; periplasmic-binding protein 6405515 5751372 Daci_5751 Delftia acidovorans SPH-1 periplasmic-binding protein YP_001566764.1 6404574 R 398578 CDS YP_001566765.1 160901183 5751373 complement(6405526..6407766) 1 NC_010002.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cte:CT0935 TonB-dependent receptor-related protein; TonB-dependent receptor 6407766 5751373 Daci_5752 Delftia acidovorans SPH-1 TonB-dependent receptor YP_001566765.1 6405526 R 398578 CDS YP_001566766.1 160901184 5751374 complement(6408230..6409105) 1 NC_010002.1 PFAM: CHAD domain containing protein; KEGG: aav:Aave_4030 adenylate cyclase; CHAD domain-containing protein 6409105 5751374 Daci_5753 Delftia acidovorans SPH-1 CHAD domain-containing protein YP_001566766.1 6408230 R 398578 CDS YP_001566767.1 160901185 5751375 complement(6409175..6409666) 1 NC_010002.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: bch:Bcen2424_4448 YbaK/prolyl-tRNA synthetase associated region; YbaK/prolyl-tRNA synthetase associated domain-containing protein 6409666 5751375 Daci_5754 Delftia acidovorans SPH-1 YbaK/prolyl-tRNA synthetase associated domain-containing protein YP_001566767.1 6409175 R 398578 CDS YP_001566768.1 160901186 5751376 6409724..6410374 1 NC_010002.1 PFAM: YheO domain protein; KEGG: rme:Rmet_4823 hypothetical protein; YheO domain-containing protein 6410374 5751376 Daci_5755 Delftia acidovorans SPH-1 YheO domain-containing protein YP_001566768.1 6409724 D 398578 CDS YP_001566769.1 160901187 5751377 6410419..6411381 1 NC_010002.1 catalyzes the formation of 2-oxobutanoate from L-threonine or the formation of pyruvate from serine; serine/threonine dehydratase 6411381 5751377 Daci_5756 Delftia acidovorans SPH-1 serine/threonine dehydratase YP_001566769.1 6410419 D 398578 CDS YP_001566770.1 160901188 5751378 complement(6411413..6412147) 1 NC_010002.1 PFAM: NUDIX hydrolase; KEGG: pna:Pnap_3721 NUDIX hydrolase; NUDIX hydrolase 6412147 5751378 Daci_5757 Delftia acidovorans SPH-1 NUDIX hydrolase YP_001566770.1 6411413 R 398578 CDS YP_001566771.1 160901189 5751379 6412236..6413309 1 NC_010002.1 PFAM: band 7 protein; KEGG: bbt:BBta_5114 hypothetical protein; hypothetical protein 6413309 5751379 Daci_5758 Delftia acidovorans SPH-1 hypothetical protein YP_001566771.1 6412236 D 398578 CDS YP_001566772.1 160901190 5751380 6413296..6414228 1 NC_010002.1 KEGG: bbt:BBta_5115 hypothetical protein; hypothetical protein 6414228 5751380 Daci_5759 Delftia acidovorans SPH-1 hypothetical protein YP_001566772.1 6413296 D 398578 CDS YP_001566773.1 160901191 5751381 6414270..6415454 1 NC_010002.1 PFAM: phosphotransferase KptA/Tpt1; KEGG: rfr:Rfer_1178 hypothetical protein; phosphate acetyltransferase 6415454 5751381 Daci_5760 Delftia acidovorans SPH-1 phosphate acetyltransferase YP_001566773.1 6414270 D 398578 CDS YP_001566774.1 160901192 5751382 6415483..6416064 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: pfl:PFL_5821 hypothetical protein; hypothetical protein 6416064 5751382 Daci_5761 Delftia acidovorans SPH-1 hypothetical protein YP_001566774.1 6415483 D 398578 CDS YP_001566775.1 160901193 5751383 6416061..6417029 1 NC_010002.1 PFAM: ADP-ribosylation/Crystallin J1; KEGG: pfl:PFL_4115 ADP-ribosylglycohydrolase family protein; ADP-ribosylation/crystallin J1 6417029 5751383 Daci_5762 Delftia acidovorans SPH-1 ADP-ribosylation/crystallin J1 YP_001566775.1 6416061 D 398578 CDS YP_001566776.1 160901194 5751384 6417267..6418457 1 NC_010002.1 PFAM: Fimbrial protein; KEGG: rme:Rmet_2545 fimbrial protein; fimbrial protein 6418457 5751384 Daci_5763 Delftia acidovorans SPH-1 fimbrial protein YP_001566776.1 6417267 D 398578 CDS YP_001566777.1 160901195 5751385 complement(6418473..6418886) 1 NC_010002.1 KEGG: bur:Bcep18194_B0494 hypothetical protein; hypothetical protein 6418886 5751385 Daci_5764 Delftia acidovorans SPH-1 hypothetical protein YP_001566777.1 6418473 R 398578 CDS YP_001566778.1 160901196 5751386 6419111..6419971 1 NC_010002.1 PFAM: extracellular solute-binding protein family 3; KEGG: pst:PSPTO_2627 amino acid ABC transporter, periplasmic amino acid-binding protein; extracellular solute-binding protein 6419971 5751386 Daci_5765 Delftia acidovorans SPH-1 extracellular solute-binding protein YP_001566778.1 6419111 D 398578 CDS YP_001566779.1 160901197 5751387 6420061..6420987 1 NC_010002.1 PFAM: extracellular solute-binding protein family 3; KEGG: bxe:Bxe_C1129 ABC polar amino acid family transporter, periplasmic ligand binding protein; extracellular solute-binding protein 6420987 5751387 Daci_5766 Delftia acidovorans SPH-1 extracellular solute-binding protein YP_001566779.1 6420061 D 398578 CDS YP_001566780.1 160901198 5751388 6420984..6421802 1 NC_010002.1 PFAM: extracellular solute-binding protein family 3; KEGG: bxe:Bxe_C1129 ABC polar amino acid family transporter, periplasmic ligand binding protein; extracellular solute-binding protein 6421802 5751388 Daci_5767 Delftia acidovorans SPH-1 extracellular solute-binding protein YP_001566780.1 6420984 D 398578 CDS YP_001566781.1 160901199 5751389 6421799..6423358 1 NC_010002.1 PFAM: FAD linked oxidase domain protein; KEGG: bpe:BP3139 putative oxidoreductase; FAD linked oxidase domain-containing protein 6423358 5751389 Daci_5768 Delftia acidovorans SPH-1 FAD linked oxidase domain-containing protein YP_001566781.1 6421799 D 398578 CDS YP_001566782.1 160901200 5751390 6423355..6424626 1 NC_010002.1 PFAM: aminotransferase class I and II; KEGG: pst:PSPTO_2925 aspartate aminotransferase; class I/II aminotransferase 6424626 5751390 Daci_5769 Delftia acidovorans SPH-1 class I/II aminotransferase YP_001566782.1 6423355 D 398578 CDS YP_001566783.1 160901201 5751391 6424623..6425372 1 NC_010002.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pst:PSPTO_2628 amino acid ABC transporter, permease protein; polar amino acid ABC transporter inner membrane protein 6425372 5751391 Daci_5770 Delftia acidovorans SPH-1 polar amino acid ABC transporter inner membrane protein YP_001566783.1 6424623 D 398578 CDS YP_001566784.1 160901202 5751392 6425362..6426183 1 NC_010002.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pst:PSPTO_2629 amino acid ABC transporter, permease protein; polar amino acid ABC transporter inner membrane protein 6426183 5751392 Daci_5771 Delftia acidovorans SPH-1 polar amino acid ABC transporter inner membrane protein YP_001566784.1 6425362 D 398578 CDS YP_001566785.1 160901203 5751393 6426170..6427180 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pst:PSPTO_2630 amino acid ABC transporter, ATP-binding protein; ABC transporter-like protein 6427180 5751393 Daci_5772 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001566785.1 6426170 D 398578 CDS YP_001566786.1 160901204 5751394 6427206..6427877 1 NC_010002.1 KEGG: bxe:Bxe_C1132 hypothetical protein; hypothetical protein 6427877 5751394 Daci_5773 Delftia acidovorans SPH-1 hypothetical protein YP_001566786.1 6427206 D 398578 CDS YP_001566787.1 160901205 5751395 6427874..6429097 1 NC_010002.1 KEGG: bxe:Bxe_C1131 cystathionine beta-lyase; TIGRFAM: cystathionine beta-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; cystathionine beta-lyase 6429097 5751395 Daci_5774 Delftia acidovorans SPH-1 cystathionine beta-lyase YP_001566787.1 6427874 D 398578 CDS YP_001566788.1 160901206 5751396 complement(6429910..6432234) 1 NC_010002.1 PFAM: Rhodanese domain protein; KEGG: bxe:Bxe_B2410 putative rhodanese-like domain protein; rhodanese domain-containing protein 6432234 5751396 Daci_5775 Delftia acidovorans SPH-1 rhodanese domain-containing protein YP_001566788.1 6429910 R 398578 CDS YP_001566789.1 160901207 5751397 6432358..6433347 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: reu:Reut_B3949 hypothetical protein; hypothetical protein 6433347 5751397 Daci_5776 Delftia acidovorans SPH-1 hypothetical protein YP_001566789.1 6432358 D 398578 CDS YP_001566790.1 160901208 5751398 complement(6433305..6433814) 1 NC_010002.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rso:RSc3176 hypothetical protein; N-acetyltransferase GCN5 6433814 5751398 Daci_5777 Delftia acidovorans SPH-1 N-acetyltransferase GCN5 YP_001566790.1 6433305 R 398578 CDS YP_001566791.1 160901209 5751399 complement(6433930..6434430) 1 NC_010002.1 KEGG: bur:Bcep18194_B0957 hypothetical protein; hypothetical protein 6434430 5751399 Daci_5778 Delftia acidovorans SPH-1 hypothetical protein YP_001566791.1 6433930 R 398578 CDS YP_001566792.1 160901210 5751400 complement(6434411..6435217) 1 NC_010002.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_B0958 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 6435217 5751400 Daci_5779 Delftia acidovorans SPH-1 short-chain dehydrogenase/reductase SDR YP_001566792.1 6434411 R 398578 CDS YP_001566793.1 160901211 5751401 6435378..6435905 1 NC_010002.1 PFAM: helix-turn-helix HxlR type; KEGG: bur:Bcep18194_B0959 putative transcriptional regulator; HxlR family transcriptional regulator 6435905 5751401 Daci_5780 Delftia acidovorans SPH-1 HxlR family transcriptional regulator YP_001566793.1 6435378 D 398578 CDS YP_001566794.1 160901212 5751402 6435914..6436717 1 NC_010002.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: pmy:Pmen_3327 transcriptional regulator, AraC family; AraC family transcriptional regulator 6436717 5751402 Daci_5781 Delftia acidovorans SPH-1 AraC family transcriptional regulator YP_001566794.1 6435914 D 398578 CDS YP_001566795.1 160901213 5751403 6436811..6437431 1 NC_010002.1 PFAM: ThiJ/PfpI domain protein; KEGG: rfr:Rfer_2521 ThiJ/PfpI; ThiJ/PfpI domain-containing protein 6437431 5751403 Daci_5782 Delftia acidovorans SPH-1 ThiJ/PfpI domain-containing protein YP_001566795.1 6436811 D 398578 CDS YP_001566796.1 160901214 5751404 6437439..6438389 1 NC_010002.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: pfl:PFL_4987 hypothetical protein; hypothetical protein 6438389 5751404 Daci_5783 Delftia acidovorans SPH-1 hypothetical protein YP_001566796.1 6437439 D 398578 CDS YP_001566797.1 160901215 5751405 complement(6438431..6438994) 1 NC_010002.1 PFAM: beta-Ig-H3/fasciclin; KEGG: aav:Aave_3256 beta-Ig-H3/fasciclin; beta-Ig-H3/fasciclin 6438994 5751405 Daci_5784 Delftia acidovorans SPH-1 beta-Ig-H3/fasciclin YP_001566797.1 6438431 R 398578 CDS YP_001566798.1 160901216 5751406 6439306..6440277 1 NC_010002.1 KEGG: bur:Bcep18194_C6576 hypothetical protein; hypothetical protein 6440277 5751406 Daci_5785 Delftia acidovorans SPH-1 hypothetical protein YP_001566798.1 6439306 D 398578 CDS YP_001566799.1 160901217 5751407 6440372..6440611 1 NC_010002.1 hypothetical protein 6440611 5751407 Daci_5786 Delftia acidovorans SPH-1 hypothetical protein YP_001566799.1 6440372 D 398578 CDS YP_001566800.1 160901218 5751408 6440657..6442027 1 NC_010002.1 TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: bja:bll5044 manganese transport protein; Mn2+/Fe2+ transporter 6442027 5751408 Daci_5787 Delftia acidovorans SPH-1 Mn2+/Fe2+ transporter YP_001566800.1 6440657 D 398578 CDS YP_001566801.1 160901219 5751409 6442177..6442656 1 NC_010002.1 SMART: Rhodanese domain protein; KEGG: pna:Pnap_0538 rhodanese domain protein; rhodanese domain-containing protein 6442656 5751409 Daci_5788 Delftia acidovorans SPH-1 rhodanese domain-containing protein YP_001566801.1 6442177 D 398578 CDS YP_001566802.1 160901220 5751410 6442669..6443583 1 NC_010002.1 KEGG: pna:Pnap_0539 serine O-acetyltransferase; serine O-acetyltransferase 6443583 5751410 Daci_5789 Delftia acidovorans SPH-1 serine O-acetyltransferase YP_001566802.1 6442669 D 398578 CDS YP_001566803.1 160901221 5751411 6443580..6443852 1 NC_010002.1 PFAM: helix-turn-helix domain protein; KEGG: pna:Pnap_0540 helix-turn-helix domain protein; XRE family transcriptional regulator 6443852 5751411 Daci_5790 Delftia acidovorans SPH-1 XRE family transcriptional regulator YP_001566803.1 6443580 D 398578 CDS YP_001566804.1 160901222 5751412 6443936..6444868 1 NC_010002.1 KEGG: mms:mma_2536 major membrane protein I; major membrane protein I 6444868 5751412 Daci_5791 Delftia acidovorans SPH-1 major membrane protein I YP_001566804.1 6443936 D 398578 CDS YP_001566805.1 160901223 5751413 6444881..6446806 1 NC_010002.1 TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: pna:Pnap_0543 cysteine desulfurases, SufS subfamily; SufS subfamily cysteine desulfurase 6446806 5751413 Daci_5792 Delftia acidovorans SPH-1 SufS subfamily cysteine desulfurase YP_001566805.1 6444881 D 398578 CDS YP_001566806.1 160901224 5751414 6447162..6448097 1 NC_010002.1 PFAM: Fimbrial protein; KEGG: rme:Rmet_2545 fimbrial protein; fimbrial protein 6448097 5751414 Daci_5793 Delftia acidovorans SPH-1 fimbrial protein YP_001566806.1 6447162 D 398578 CDS YP_001566807.1 160901225 5751415 complement(6448188..6449144) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: reu:Reut_B5438 hypothetical protein; hypothetical protein 6449144 5751415 Daci_5794 Delftia acidovorans SPH-1 hypothetical protein YP_001566807.1 6448188 R 398578 CDS YP_001566808.1 160901226 5751416 complement(6449189..6450184) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: reh:H16_B1820 probable extra-cytoplasmic solute receptor; hypothetical protein 6450184 5751416 Daci_5795 Delftia acidovorans SPH-1 hypothetical protein YP_001566808.1 6449189 R 398578 CDS YP_001566809.1 160901227 5751417 complement(6450250..6451314) 1 NC_010002.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: reh:H16_B1819 D-3-phosphoglycerate dehydrogenase; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 6451314 5751417 Daci_5796 Delftia acidovorans SPH-1 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_001566809.1 6450250 R 398578 CDS YP_001566810.1 160901228 5751418 complement(6451314..6451991) 1 NC_010002.1 PFAM: Dimethylmenaquinone methyltransferase; KEGG: reh:H16_B1818 demethylmenaquinone methyltransferase; dimethylmenaquinone methyltransferase 6451991 5751418 Daci_5797 Delftia acidovorans SPH-1 dimethylmenaquinone methyltransferase YP_001566810.1 6451314 R 398578 CDS YP_001566811.1 160901229 5751419 complement(6452051..6453298) 1 NC_010002.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: reh:H16_B1817 L-lactate cytochrome c reductase; L-lactate dehydrogenase 6453298 5751419 Daci_5798 Delftia acidovorans SPH-1 L-lactate dehydrogenase YP_001566811.1 6452051 R 398578 CDS YP_001566812.1 160901230 5751420 6453382..6454302 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_B1816 transcriptional regulator, LysR-family; LysR family transcriptional regulator 6454302 5751420 Daci_5799 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001566812.1 6453382 D 398578 CDS YP_001566813.1 160901231 5751421 6454594..6455436 1 NC_010002.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gur:Gura_0749 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 6455436 5751421 Daci_5800 Delftia acidovorans SPH-1 N-acetyltransferase GCN5 YP_001566813.1 6454594 D 398578 CDS YP_001566814.1 160901232 5751422 6455433..6455954 1 NC_010002.1 PFAM: Tail Collar domain protein; KEGG: son:SO_0185 hypothetical microcystin dependent protein; tail collar domain-containing protein 6455954 5751422 Daci_5801 Delftia acidovorans SPH-1 tail collar domain-containing protein YP_001566814.1 6455433 D 398578 CDS YP_001566815.1 160901233 5751423 6455973..6456473 1 NC_010002.1 PFAM: Tail Collar domain protein; KEGG: aba:Acid345_2454 phage tail collar; tail collar domain-containing protein 6456473 5751423 Daci_5802 Delftia acidovorans SPH-1 tail collar domain-containing protein YP_001566815.1 6455973 D 398578 CDS YP_001566816.1 160901234 5751424 6456502..6457044 1 NC_010002.1 PFAM: Tail Collar domain protein; KEGG: mlo:mll4441 microcystin dependent protein MdpB; tail collar domain-containing protein 6457044 5751424 Daci_5803 Delftia acidovorans SPH-1 tail collar domain-containing protein YP_001566816.1 6456502 D 398578 CDS YP_001566817.1 160901235 5751425 6457155..6461339 1 NC_010002.1 PFAM: cell surface receptor IPT/TIG domain protein; Ig family protein; KEGG: rpd:RPD_3003 outer membrane autotransporter barrel; cell surface receptor IPT/TIG domain-containing protein 6461339 5751425 Daci_5804 Delftia acidovorans SPH-1 cell surface receptor IPT/TIG domain-containing protein YP_001566817.1 6457155 D 398578 CDS YP_001566818.1 160901236 5751426 6461438..6461647 1 NC_010002.1 KEGG: bbr:BB3303 hypothetical protein; hypothetical protein 6461647 5751426 Daci_5805 Delftia acidovorans SPH-1 hypothetical protein YP_001566818.1 6461438 D 398578 CDS YP_001566819.1 160901237 5751427 complement(6461677..6462147) 1 NC_010002.1 PFAM: Endoribonuclease L-PSP; KEGG: pol:Bpro_2665 endoribonuclease L-PSP; endoribonuclease L-PSP 6462147 5751427 Daci_5806 Delftia acidovorans SPH-1 endoribonuclease L-PSP YP_001566819.1 6461677 R 398578 CDS YP_001566820.1 160901238 5751428 complement(6462338..6463153) 1 NC_010002.1 PFAM: protein of unknown function DUF990; KEGG: aav:Aave_2071 protein of unknown function DUF990; hypothetical protein 6463153 5751428 Daci_5807 Delftia acidovorans SPH-1 hypothetical protein YP_001566820.1 6462338 R 398578 CDS YP_001566821.1 160901239 5751429 complement(6463159..6464028) 1 NC_010002.1 KEGG: reu:Reut_A1068 putative ABC transporter permease protein; putative ABC transporter permease 6464028 5751429 Daci_5808 Delftia acidovorans SPH-1 putative ABC transporter permease YP_001566821.1 6463159 R 398578 CDS YP_001566822.1 160901240 5751430 complement(6464034..6464912) 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: reu:Reut_A1069 ABC transporter related; ABC transporter-like protein 6464912 5751430 Daci_5809 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001566822.1 6464034 R 398578 CDS YP_001566823.1 160901241 5751431 6465008..6466840 1 NC_010002.1 TIGRFAM: potassium efflux system protein; PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: pmy:Pmen_2368 potassium efflux system protein; potassium efflux system protein 6466840 5751431 Daci_5810 Delftia acidovorans SPH-1 potassium efflux system protein YP_001566823.1 6465008 D 398578 CDS YP_001566824.1 160901242 5751432 complement(6466865..6467254) 1 NC_010002.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pen:PSEEN3005 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 6467254 5751432 Daci_5811 Delftia acidovorans SPH-1 glyoxalase/bleomycin resistance protein/dioxygenase YP_001566824.1 6466865 R 398578 CDS YP_001566825.1 160901243 5751433 complement(6467321..6467674) 1 NC_010002.1 TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: ajs:Ajs_2406 TonB family protein; TonB family protein 6467674 5751433 Daci_5812 Delftia acidovorans SPH-1 TonB family protein YP_001566825.1 6467321 R 398578 CDS YP_001566826.1 160901244 5751434 complement(6467743..6470115) 1 NC_010002.1 SMART: Helicase-like, DEXD box c2 type; helicase c2; KEGG: ajs:Ajs_2428 helicase C2; helicase c2 6470115 5751434 Daci_5813 Delftia acidovorans SPH-1 helicase c2 YP_001566826.1 6467743 R 398578 CDS YP_001566827.1 160901245 5751435 complement(6470112..6471788) 1 NC_010002.1 PFAM: VRR-NUC domain protein; KEGG: ajs:Ajs_2429 hypothetical protein; VRR-NUC domain-containing protein 6471788 5751435 Daci_5814 Delftia acidovorans SPH-1 VRR-NUC domain-containing protein YP_001566827.1 6470112 R 398578 CDS YP_001566828.1 160901246 5751436 complement(6471898..6472710) 1 NC_010002.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bja:bll7249 oxidoreductase; short-chain dehydrogenase/reductase SDR 6472710 5751436 Daci_5815 Delftia acidovorans SPH-1 short-chain dehydrogenase/reductase SDR YP_001566828.1 6471898 R 398578 CDS YP_001566829.1 160901247 5751437 6472881..6473084 1 NC_010002.1 KEGG: reh:H16_B1205 hypothetical protein; hypothetical protein 6473084 5751437 Daci_5816 Delftia acidovorans SPH-1 hypothetical protein YP_001566829.1 6472881 D 398578 CDS YP_001566830.1 160901248 5751438 6473081..6473461 1 NC_010002.1 KEGG: reh:H16_B1204 hypothetical protein; hypothetical protein 6473461 5751438 Daci_5817 Delftia acidovorans SPH-1 hypothetical protein YP_001566830.1 6473081 D 398578 CDS YP_001566831.1 160901249 5751439 complement(6473511..6475388) 1 NC_010002.1 PFAM: peptidase S15; X-Pro dipeptidyl-peptidase domain protein; KEGG: bra:BRADO1420 aminopeptidase; homologous to antibiotic hydrolase or cocain esterase; X-Pro dipeptidyl-peptidase domain-containing protein 6475388 5751439 Daci_5818 Delftia acidovorans SPH-1 X-Pro dipeptidyl-peptidase domain-containing protein YP_001566831.1 6473511 R 398578 CDS YP_001566832.1 160901250 5751440 complement(6475400..6476389) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: rme:Rmet_3671 uncharacterized protein UPF0065; hypothetical protein 6476389 5751440 Daci_5819 Delftia acidovorans SPH-1 hypothetical protein YP_001566832.1 6475400 R 398578 CDS YP_001566833.1 160901251 5751441 complement(6476414..6477430) 1 NC_010002.1 PFAM: porin Gram-negative type; KEGG: reh:H16_A1305 outer membrane protein (porin); porin 6477430 5751441 Daci_5820 Delftia acidovorans SPH-1 porin YP_001566833.1 6476414 R 398578 CDS YP_001566834.1 160901252 5751442 6477572..6478522 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ccr:CC_1621 transcriptional regulator, LysR family; LysR family transcriptional regulator 6478522 5751442 Daci_5821 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001566834.1 6477572 D 398578 CDS YP_001566835.1 160901253 5751443 complement(6478544..6479269) 1 NC_010002.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pap:PSPA7_2932 probable permease of ABC transporter; binding-protein-dependent transport system inner membrane protein 6479269 5751443 Daci_5822 Delftia acidovorans SPH-1 binding-protein-dependent transport system inner membrane protein YP_001566835.1 6478544 R 398578 CDS YP_001566836.1 160901254 5751444 complement(6479293..6480456) 1 NC_010002.1 KEGG: ppu:PP_3636 sulfonate ABC transporter, periplasmic sulfonate-binding protein, putative; sulfonate ABC transporter periplasmic sulfonate-binding protein 6480456 5751444 Daci_5823 Delftia acidovorans SPH-1 sulfonate ABC transporter periplasmic sulfonate-binding protein YP_001566836.1 6479293 R 398578 CDS YP_001566837.1 160901255 5751445 complement(6480624..6481439) 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pau:PA14_34500 putative ATP-binding component of ABC transporter; ABC transporter-like protein 6481439 5751445 Daci_5824 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001566837.1 6480624 R 398578 CDS YP_001566838.1 160901256 5751446 complement(6481436..6482533) 1 NC_010002.1 KEGG: pau:PA14_34490 putative acyl-CoA dehydrogenase; putative acyl-CoA dehydrogenase 6482533 5751446 Daci_5825 Delftia acidovorans SPH-1 putative acyl-CoA dehydrogenase YP_001566838.1 6481436 R 398578 CDS YP_001566839.1 160901257 5751447 complement(6482523..6483164) 1 NC_010002.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: bxe:Bxe_B1537 alkylhydroperoxidase AhpD core; alkylhydroperoxidase 6483164 5751447 Daci_5826 Delftia acidovorans SPH-1 alkylhydroperoxidase YP_001566839.1 6482523 R 398578 CDS YP_001566840.1 160901258 5751448 complement(6483239..6484309) 1 NC_010002.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_B1536 putative transcriptional regulator, AraC family; AraC family transcriptional regulator 6484309 5751448 Daci_5827 Delftia acidovorans SPH-1 AraC family transcriptional regulator YP_001566840.1 6483239 R 398578 CDS YP_001566841.1 160901259 5751449 complement(6484343..6485116) 1 NC_010002.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; Cupin 2 conserved barrel domain protein; KEGG: bur:Bcep18194_C6884 transcriptional regulator, AraC family; AraC family transcriptional regulator 6485116 5751449 Daci_5828 Delftia acidovorans SPH-1 AraC family transcriptional regulator YP_001566841.1 6484343 R 398578 CDS YP_001566842.1 160901260 5751450 6485296..6486564 1 NC_010002.1 PFAM: major facilitator superfamily MFS_1; KEGG: aav:Aave_2124 major facilitator superfamily MFS_1; major facilitator transporter 6486564 5751450 Daci_5829 Delftia acidovorans SPH-1 major facilitator transporter YP_001566842.1 6485296 D 398578 CDS YP_001566843.1 160901261 5751451 complement(6486574..6487593) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: vei:Veis_0038 uncharacterized protein UPF0065; hypothetical protein 6487593 5751451 Daci_5830 Delftia acidovorans SPH-1 hypothetical protein YP_001566843.1 6486574 R 398578 CDS YP_001566844.1 160901262 5751452 6487788..6489560 1 NC_010002.1 catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase 6489560 5751452 Daci_5831 Delftia acidovorans SPH-1 dihydroxy-acid dehydratase YP_001566844.1 6487788 D 398578 CDS YP_001566845.1 160901263 5751453 6489564..6490343 1 NC_010002.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: reu:Reut_B3951 regulatory protein GntR, HTH:GntR, C-terminal; GntR family transcriptional regulator 6490343 5751453 Daci_5832 Delftia acidovorans SPH-1 GntR family transcriptional regulator YP_001566845.1 6489564 D 398578 CDS YP_001566846.1 160901264 5751454 complement(6490374..6490691) 1 NC_010002.1 PFAM: plasmid stabilization system; KEGG: bam:Bamb_6594 plasmid stabilization system; plasmid stabilization system protein 6490691 5751454 Daci_5833 Delftia acidovorans SPH-1 plasmid stabilization system protein YP_001566846.1 6490374 R 398578 CDS YP_001566847.1 160901265 5751455 complement(6490688..6490957) 1 NC_010002.1 KEGG: vei:Veis_2291 putative transcriptional regulators, CopG/Arc/MetJ family; CopG/Arc/MetJ family transcriptional regulator 6490957 5751455 Daci_5834 Delftia acidovorans SPH-1 CopG/Arc/MetJ family transcriptional regulator YP_001566847.1 6490688 R 398578 CDS YP_001566848.1 160901266 5751456 complement(6491047..6491877) 1 NC_010002.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: rru:Rru_A3128 transcriptional regulator, AraC family; AraC family transcriptional regulator 6491877 5751456 Daci_5835 Delftia acidovorans SPH-1 AraC family transcriptional regulator YP_001566848.1 6491047 R 398578 CDS YP_001566849.1 160901267 5751457 6491948..6492610 1 NC_010002.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: rru:Rru_A3127 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; FMN-binding pyridoxamine 5'-phosphate oxidase-like protein 6492610 5751457 Daci_5836 Delftia acidovorans SPH-1 FMN-binding pyridoxamine 5'-phosphate oxidase-like protein YP_001566849.1 6491948 D 398578 CDS YP_001566850.1 160901268 5751458 complement(6492847..6493359) 1 NC_010002.1 PFAM: MgtC/SapB transporter; KEGG: bpa:BPP3813 putative Mg(2+) transporter; MgtC/SapB transporter 6493359 5751458 Daci_5837 Delftia acidovorans SPH-1 MgtC/SapB transporter YP_001566850.1 6492847 R 398578 CDS YP_001566851.1 160901269 5751459 complement(6493475..6494932) 1 NC_010002.1 PFAM: Chloride channel core; KEGG: aav:Aave_4712 Cl-channel, voltage-gated family protein; chloride channel core 6494932 5751459 Daci_5838 Delftia acidovorans SPH-1 chloride channel core YP_001566851.1 6493475 R 398578 CDS YP_001566852.1 160901270 5751460 complement(6495090..6496007) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bvi:Bcep1808_4280 transcriptional regulator, LysR family; LysR family transcriptional regulator 6496007 5751460 Daci_5839 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001566852.1 6495090 R 398578 CDS YP_001566853.1 160901271 5751461 6496125..6497174 1 NC_010002.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bvi:Bcep1808_4278 alcohol dehydrogenase, zinc-binding domain protein; alcohol dehydrogenase 6497174 5751461 Daci_5840 Delftia acidovorans SPH-1 alcohol dehydrogenase YP_001566853.1 6496125 D 398578 CDS YP_001566854.1 160901272 5751462 complement(6497213..6497638) 1 NC_010002.1 PFAM: PilT protein domain protein; KEGG: vei:Veis_3474 PilT protein domain protein; PilT domain-containing protein 6497638 5751462 Daci_5841 Delftia acidovorans SPH-1 PilT domain-containing protein YP_001566854.1 6497213 R 398578 CDS YP_001566855.1 160901273 5751463 complement(6497635..6497892) 1 NC_010002.1 KEGG: vei:Veis_3475 plasmid stability protein StbC; plasmid stability protein StbC 6497892 5751463 Daci_5842 Delftia acidovorans SPH-1 plasmid stability protein StbC YP_001566855.1 6497635 R 398578 CDS YP_001566856.1 160901274 5751464 complement(6497996..6498793) 1 NC_010002.1 catalyzes the formation of precorrin 6x from precorrin 5; precorrin 6A synthase 6498793 5751464 Daci_5843 Delftia acidovorans SPH-1 precorrin 6A synthase YP_001566856.1 6497996 R 398578 CDS YP_001566857.1 160901275 5751465 complement(6498790..6499668) 1 NC_010002.1 TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: rsp:RSP_2821 putative precorrin-4 C11-methyltransferase; precorrin-4 C(11)-methyltransferase 6499668 5751465 Daci_5844 Delftia acidovorans SPH-1 precorrin-4 C(11)-methyltransferase YP_001566857.1 6498790 R 398578 CDS YP_001566858.1 160901276 5751466 complement(6499665..6500162) 1 NC_010002.1 KEGG: sil:SPO2870 cobalamin biosynthesis domain protein; hypothetical protein 6500162 5751466 Daci_5845 Delftia acidovorans SPH-1 hypothetical protein YP_001566858.1 6499665 R 398578 CDS YP_001566859.1 160901277 5751467 complement(6500159..6501361) 1 NC_010002.1 KEGG: rsh:Rsph17029_1473 precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-6y C5,15-methyltransferase subunit CbiE 6501361 5751467 Daci_5846 Delftia acidovorans SPH-1 precorrin-6y C5,15-methyltransferase subunit CbiE YP_001566859.1 6500159 R 398578 CDS YP_001566860.1 160901278 5751468 6501405..6502154 1 NC_010002.1 KEGG: rsq:Rsph17025_1522 precorrin-6x reductase; TIGRFAM: precorrin-6x reductase; PFAM: Precorrin-6x reductase CbiJ/CobK; precorrin-6x reductase 6502154 5751468 Daci_5847 Delftia acidovorans SPH-1 precorrin-6x reductase YP_001566860.1 6501405 D 398578 CDS YP_001566861.1 160901279 5751469 complement(6502088..6502921) 1 NC_010002.1 TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: rsh:Rsph17029_1471 precorrin-3B C17-methyltransferase; precorrin-3B C(17)-methyltransferase 6502921 5751469 Daci_5848 Delftia acidovorans SPH-1 precorrin-3B C(17)-methyltransferase YP_001566861.1 6502088 R 398578 CDS YP_001566862.1 160901280 5751470 complement(6502915..6503685) 1 NC_010002.1 TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bja:blr3266 precorrin-2 C20 methyltransferase; precorrin-2 C(20)-methyltransferase 6503685 5751470 Daci_5849 Delftia acidovorans SPH-1 precorrin-2 C(20)-methyltransferase YP_001566862.1 6502915 R 398578 CDS YP_001566863.1 160901281 5751471 complement(6503675..6504304) 1 NC_010002.1 catalyzes the interconversion of precorrin-8X and hydrogenobyrinate; precorrin-8X methylmutase 6504304 cobH 5751471 cobH Delftia acidovorans SPH-1 precorrin-8X methylmutase YP_001566863.1 6503675 R 398578 CDS YP_001566864.1 160901282 5751472 complement(6504304..6505608) 1 NC_010002.1 TIGRFAM: precorrin-3B synthase; PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: sit:TM1040_2211 precorrin-3B synthase; precorrin-3B synthase 6505608 5751472 Daci_5851 Delftia acidovorans SPH-1 precorrin-3B synthase YP_001566864.1 6504304 R 398578 CDS YP_001566865.1 160901283 5751473 6505703..6507559 1 NC_010002.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bte:BTH_I2374 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 6507559 5751473 Daci_5852 Delftia acidovorans SPH-1 methyl-accepting chemotaxis sensory transducer YP_001566865.1 6505703 D 398578 CDS YP_001566866.1 160901284 5751474 6507578..6508705 1 NC_010002.1 PFAM: FecR protein; KEGG: neu:NE1191 putative transmembrane sensor; anti-FecI sigma factor FecR 6508705 5751474 Daci_5853 Delftia acidovorans SPH-1 anti-FecI sigma factor FecR YP_001566866.1 6507578 D 398578 CDS YP_001566867.1 160901285 5751475 6508674..6509675 1 NC_010002.1 KEGG: rme:Rmet_2396 thiol:disulfide interchange protein; protein-disulfide isomerase-like protein 6509675 5751475 Daci_5854 Delftia acidovorans SPH-1 protein-disulfide isomerase-like protein YP_001566867.1 6508674 D 398578 CDS YP_001566868.1 160901286 5751476 6509770..6510411 1 NC_010002.1 PFAM: Glutathione S-transferase domain; KEGG: ccr:CC_2901 glutathione S-transferase family protein; glutathione S-transferase domain-containing protein 6510411 5751476 Daci_5855 Delftia acidovorans SPH-1 glutathione S-transferase domain-containing protein YP_001566868.1 6509770 D 398578 CDS YP_001566869.1 160901287 5751477 complement(6510436..6511917) 1 NC_010002.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: eca:ECA3446 multidrug resistance outer membrane protein; RND efflux system outer membrane lipoprotein 6511917 5751477 Daci_5856 Delftia acidovorans SPH-1 RND efflux system outer membrane lipoprotein YP_001566869.1 6510436 R 398578 CDS YP_001566870.1 160901288 5751478 complement(6511923..6515072) 1 NC_010002.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: pst:PSPTO_2592 AcrB/AcrD/AcrF family protein; hydrophobe/amphiphile efflux-1 family protein 6515072 5751478 Daci_5857 Delftia acidovorans SPH-1 hydrophobe/amphiphile efflux-1 family protein YP_001566870.1 6511923 R 398578 CDS YP_001566871.1 160901289 5751479 complement(6515099..6516328) 1 NC_010002.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pen:PSEEN3125 multidrug efflux RND membrane fusion protein MexC; RND family efflux transporter MFP subunit 6516328 5751479 Daci_5858 Delftia acidovorans SPH-1 RND family efflux transporter MFP subunit YP_001566871.1 6515099 R 398578 CDS YP_001566872.1 160901290 5751480 6516466..6517032 1 NC_010002.1 KEGG: pau:PA14_60860 transcriptional regulatory protein NfxB; transcriptional regulator NfxB 6517032 5751480 Daci_5859 Delftia acidovorans SPH-1 transcriptional regulator NfxB YP_001566872.1 6516466 D 398578 CDS YP_001566873.1 160901291 5751481 6517177..6518091 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_2782 transcriptional regulator, LysR family; LysR family transcriptional regulator 6518091 5751481 Daci_5860 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001566873.1 6517177 D 398578 CDS YP_001566874.1 160901292 5751482 complement(6518079..6520706) 1 NC_010002.1 Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 6520706 5751482 Daci_5861 Delftia acidovorans SPH-1 aconitate hydratase YP_001566874.1 6518079 R 398578 CDS YP_001566875.1 160901293 5751483 complement(6520768..6521964) 1 NC_010002.1 catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate; also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity; methylcitrate synthase 6521964 5751483 Daci_5862 Delftia acidovorans SPH-1 methylcitrate synthase YP_001566875.1 6520768 R 398578 CDS YP_001566876.1 160901294 5751484 complement(6521961..6522359) 1 NC_010002.1 PFAM: thioesterase superfamily protein; KEGG: ajs:Ajs_1636 thioesterase superfamily protein; thioesterase superfamily protein 6522359 5751484 Daci_5863 Delftia acidovorans SPH-1 thioesterase superfamily protein YP_001566876.1 6521961 R 398578 CDS YP_001566877.1 160901295 5751485 6522477..6523889 1 NC_010002.1 PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; KEGG: vei:Veis_4449 protein of unknown function DUF955; XRE family transcriptional regulator 6523889 5751485 Daci_5864 Delftia acidovorans SPH-1 XRE family transcriptional regulator YP_001566877.1 6522477 D 398578 CDS YP_001566878.1 160901296 5751486 complement(6523926..6524891) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: aav:Aave_1446 hypothetical protein; hypothetical protein 6524891 5751486 Daci_5865 Delftia acidovorans SPH-1 hypothetical protein YP_001566878.1 6523926 R 398578 CDS YP_001566879.1 160901297 5751487 6525199..6525513 1 NC_010002.1 KEGG: har:HEAR3316 hypothetical protein; hypothetical protein 6525513 5751487 Daci_5866 Delftia acidovorans SPH-1 hypothetical protein YP_001566879.1 6525199 D 398578 CDS YP_001566880.1 160901298 5751488 6525539..6526060 1 NC_010002.1 PFAM: protein of unknown function DUF1452; KEGG: bxe:Bxe_C0074 hypothetical protein; hypothetical protein 6526060 5751488 Daci_5867 Delftia acidovorans SPH-1 hypothetical protein YP_001566880.1 6525539 D 398578 CDS YP_001566881.1 160901299 5751489 6526091..6526324 1 NC_010002.1 KEGG: mfa:Mfla_1423 hypothetical protein; hypothetical protein 6526324 5751489 Daci_5868 Delftia acidovorans SPH-1 hypothetical protein YP_001566881.1 6526091 D 398578 CDS YP_001566882.1 160901300 5751490 6526332..6527150 1 NC_010002.1 KEGG: ajs:Ajs_0503 HAD-superfamily hydrolase, subfamily IIB; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: trehalose-phosphatase; HAD family hydrolase 6527150 5751490 Daci_5869 Delftia acidovorans SPH-1 HAD family hydrolase YP_001566882.1 6526332 D 398578 CDS YP_001566883.1 160901301 5751491 6527147..6528691 1 NC_010002.1 PFAM: glycosyl transferase family 20; KEGG: pna:Pnap_0524 alpha,alpha-trehalose-phosphate synthase (UDP-forming); alpha,alpha-trehalose-phosphate synthase 6528691 5751491 Daci_5870 Delftia acidovorans SPH-1 alpha,alpha-trehalose-phosphate synthase YP_001566883.1 6527147 D 398578 CDS YP_001566884.1 160901302 5751492 6528803..6529894 1 NC_010002.1 KEGG: bxe:Bxe_A2027 putative acyl-CoA dehydrogenase-related protein; putative acyl-CoA dehydrogenase-like protein 6529894 5751492 Daci_5871 Delftia acidovorans SPH-1 putative acyl-CoA dehydrogenase-like protein YP_001566884.1 6528803 D 398578 CDS YP_001566885.1 160901303 5751493 6529882..6530640 1 NC_010002.1 PFAM: LmbE family protein; KEGG: rha:RHA1_ro00129 hypothetical protein; LmbE family protein 6530640 5751493 Daci_5872 Delftia acidovorans SPH-1 LmbE family protein YP_001566885.1 6529882 D 398578 CDS YP_001566886.1 160901304 5751494 6530637..6531230 1 NC_010002.1 PFAM: NodS family protein; Methyltransferase type 12; KEGG: bxe:Bxe_A2028 putative methyltransferase protein; type 12 methyltransferase 6531230 5751494 Daci_5873 Delftia acidovorans SPH-1 type 12 methyltransferase YP_001566886.1 6530637 D 398578 CDS YP_001566887.1 160901305 5751495 6531243..6532055 1 NC_010002.1 PFAM: glycosyl transferase family 2; KEGG: bxe:Bxe_A2029 putative glycosyl transferase, family 2; glycosyl transferase family protein 6532055 5751495 Daci_5874 Delftia acidovorans SPH-1 glycosyl transferase family protein YP_001566887.1 6531243 D 398578 CDS YP_001566888.1 160901306 5751496 complement(6532086..6532577) 1 NC_010002.1 PFAM: DinB family protein; KEGG: bch:Bcen2424_1988 DinB family protein; DinB family protein 6532577 5751496 Daci_5875 Delftia acidovorans SPH-1 DinB family protein YP_001566888.1 6532086 R 398578 CDS YP_001566889.1 160901307 5751497 complement(6532660..6533499) 1 NC_010002.1 TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: atc:AGR_L_1187 hypothetical protein PA1367; PhzF family phenazine biosynthesis protein 6533499 5751497 Daci_5876 Delftia acidovorans SPH-1 PhzF family phenazine biosynthesis protein YP_001566889.1 6532660 R 398578 CDS YP_001566890.1 160901308 5751498 complement(6533581..6533985) 1 NC_010002.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: atc:AGR_L_1189 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 6533985 5751498 Daci_5877 Delftia acidovorans SPH-1 glyoxalase/bleomycin resistance protein/dioxygenase YP_001566890.1 6533581 R 398578 CDS YP_001566891.1 160901309 5751499 6534055..6535422 1 NC_010002.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bch:Bcen2424_1984 transcriptional regulator, GntR family; transcriptional regulator 6535422 5751499 Daci_5878 Delftia acidovorans SPH-1 transcriptional regulator YP_001566891.1 6534055 D 398578 CDS YP_001566892.1 160901310 5751500 complement(6535406..6535810) 1 NC_010002.1 KEGG: cvi:CV_3228 hypothetical protein; hypothetical protein 6535810 5751500 Daci_5879 Delftia acidovorans SPH-1 hypothetical protein YP_001566892.1 6535406 R 398578 CDS YP_001566893.1 160901311 5751501 complement(6535852..6536643) 1 NC_010002.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pna:Pnap_1455 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 6536643 5751501 Daci_5880 Delftia acidovorans SPH-1 short-chain dehydrogenase/reductase SDR YP_001566893.1 6535852 R 398578 CDS YP_001566894.1 160901312 5751502 complement(6536650..6537210) 1 NC_010002.1 KEGG: mpt:Mpe_A0231 lipoprotein, putative; putative lipoprotein 6537210 5751502 Daci_5881 Delftia acidovorans SPH-1 putative lipoprotein YP_001566894.1 6536650 R 398578 CDS YP_001566895.1 160901313 5751503 complement(6537207..6538544) 1 NC_010002.1 KEGG: mpt:Mpe_A0232 sodium:galactoside symporter family protein; sodium:galactoside symporter family protein 6538544 5751503 Daci_5882 Delftia acidovorans SPH-1 sodium:galactoside symporter family protein YP_001566895.1 6537207 R 398578 CDS YP_001566896.1 160901314 5751504 complement(6538563..6539180) 1 NC_010002.1 KEGG: pna:Pnap_1452 hypothetical protein; hypothetical protein 6539180 5751504 Daci_5883 Delftia acidovorans SPH-1 hypothetical protein YP_001566896.1 6538563 R 398578 CDS YP_001566897.1 160901315 5751505 complement(6539177..6540445) 1 NC_010002.1 PFAM: putative RNA methylase; Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mpt:Mpe_A0234 cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase 6540445 5751505 Daci_5884 Delftia acidovorans SPH-1 cyclopropane-fatty-acyl-phospholipid synthase YP_001566897.1 6539177 R 398578 CDS YP_001566898.1 160901316 5751506 complement(6540442..6541194) 1 NC_010002.1 PFAM: protein of unknown function DUF1365; KEGG: mpt:Mpe_A0235 hypothetical protein; hypothetical protein 6541194 5751506 Daci_5885 Delftia acidovorans SPH-1 hypothetical protein YP_001566898.1 6540442 R 398578 CDS YP_001566899.1 160901317 5751507 complement(6541191..6542537) 1 NC_010002.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mpt:Mpe_A0236 putative dehydrogenase; amine oxidase 6542537 5751507 Daci_5886 Delftia acidovorans SPH-1 amine oxidase YP_001566899.1 6541191 R 398578 CDS YP_001566900.1 160901318 5751508 6542678..6543316 1 NC_010002.1 PFAM: regulatory protein TetR; KEGG: mpt:Mpe_A3699 putative transcription regulator, TetR family; TetR family transcriptional regulator 6543316 5751508 Daci_5887 Delftia acidovorans SPH-1 TetR family transcriptional regulator YP_001566900.1 6542678 D 398578 CDS YP_001566901.1 160901319 5751509 6543622..6544770 1 NC_010002.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bbt:BBta_5602 putative transcriptional regulatory protein, AraC/XylS family; AraC family transcriptional regulator 6544770 5751509 Daci_5888 Delftia acidovorans SPH-1 AraC family transcriptional regulator YP_001566901.1 6543622 D 398578 CDS YP_001566902.1 160901320 5751510 6544930..6547509 1 NC_010002.1 PFAM: cell surface receptor IPT/TIG domain protein; KEGG: bra:BRADO3823 hypothetical protein; cell surface receptor IPT/TIG domain-containing protein 6547509 5751510 Daci_5889 Delftia acidovorans SPH-1 cell surface receptor IPT/TIG domain-containing protein YP_001566902.1 6544930 D 398578 CDS YP_001566903.1 160901321 5751511 6547784..6548263 1 NC_010002.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: psb:Psyr_2580 sigma-70 region 2; ECF subfamily RNA polymerase sigma-24 factor 6548263 5751511 Daci_5890 Delftia acidovorans SPH-1 ECF subfamily RNA polymerase sigma-24 factor YP_001566903.1 6547784 D 398578 CDS YP_001566904.1 160901322 5751512 6548236..6549219 1 NC_010002.1 PFAM: FecR protein; KEGG: neu:NE1098 putative transmembrane sensor; anti-FecI sigma factor FecR 6549219 5751512 Daci_5891 Delftia acidovorans SPH-1 anti-FecI sigma factor FecR YP_001566904.1 6548236 D 398578 CDS YP_001566905.1 160901323 5751513 6549317..6551848 1 NC_010002.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rme:Rmet_1118 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 6551848 5751513 Daci_5892 Delftia acidovorans SPH-1 TonB-dependent siderophore receptor YP_001566905.1 6549317 D 398578 CDS YP_001566906.1 160901324 5751514 6551986..6552501 1 NC_010002.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: azo:azo2373 putative sigma-70 factor, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 6552501 5751514 Daci_5893 Delftia acidovorans SPH-1 ECF subfamily RNA polymerase sigma-24 factor YP_001566906.1 6551986 D 398578 CDS YP_001566907.1 160901325 5751515 6552498..6553559 1 NC_010002.1 PFAM: FecR protein; KEGG: neu:NE0979 putative transmembrane sensor; anti-FecI sigma factor FecR 6553559 5751515 Daci_5894 Delftia acidovorans SPH-1 anti-FecI sigma factor FecR YP_001566907.1 6552498 D 398578 CDS YP_001566908.1 160901326 5751516 6553702..6556185 1 NC_010002.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: bur:Bcep18194_A4504 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 6556185 5751516 Daci_5895 Delftia acidovorans SPH-1 TonB-dependent siderophore receptor YP_001566908.1 6553702 D 398578 CDS YP_001566909.1 160901327 5751517 6556247..6557059 1 NC_010002.1 KEGG: rso:RSc0801 putative lipoprotein transmembrane; putative lipoprotein transmembrane 6557059 5751517 Daci_5896 Delftia acidovorans SPH-1 putative lipoprotein transmembrane YP_001566909.1 6556247 D 398578 CDS YP_001566910.1 160901328 5751518 6557155..6559272 1 NC_010002.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: aci:ACIAD2049 putative ferric siderophore receptor protein; TonB-dependent siderophore receptor 6559272 5751518 Daci_5897 Delftia acidovorans SPH-1 TonB-dependent siderophore receptor YP_001566910.1 6557155 D 398578 CDS YP_001566911.1 160901329 5751519 complement(6559749..6560129) 1 NC_010002.1 KEGG: ddi:DDBDRAFT_0192024 hypothetical protein; hypothetical protein 6560129 5751519 Daci_5898 Delftia acidovorans SPH-1 hypothetical protein YP_001566911.1 6559749 R 398578 CDS YP_001566912.1 160901330 5751520 complement(6560162..6562081) 1 NC_010002.1 TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS); KEGG: ajs:Ajs_0641 glucosamine--fructose-6-phosphate aminotransferase, isomerizing; glucosamine--fructose-6-phosphate aminotransferase 6562081 5751520 Daci_5899 Delftia acidovorans SPH-1 glucosamine--fructose-6-phosphate aminotransferase YP_001566912.1 6560162 R 398578 CDS YP_001566913.1 160901331 5751521 6562219..6562734 1 NC_010002.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: aav:Aave_4037 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 6562734 5751521 Daci_5900 Delftia acidovorans SPH-1 AsnC family transcriptional regulator YP_001566913.1 6562219 D 398578 CDS YP_001566914.1 160901332 5751522 6562952..6564112 1 NC_010002.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pen:PSEEN1308 hypothetical protein; diguanylate cyclase 6564112 5751522 Daci_5901 Delftia acidovorans SPH-1 diguanylate cyclase YP_001566914.1 6562952 D 398578 CDS YP_001566915.1 160901333 5751523 complement(6564138..6564998) 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ajs:Ajs_0637 histidine kinase; histidine kinase 6564998 5751523 Daci_5902 Delftia acidovorans SPH-1 histidine kinase YP_001566915.1 6564138 R 398578 CDS YP_001566916.1 160901334 5751524 complement(6565093..6566523) 1 NC_010002.1 TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: ajs:Ajs_0636 UDP-N-acetylglucosamine pyrophosphorylase; UDP-N-acetylglucosamine pyrophosphorylase 6566523 5751524 Daci_5903 Delftia acidovorans SPH-1 UDP-N-acetylglucosamine pyrophosphorylase YP_001566916.1 6565093 R 398578 CDS YP_001566917.1 160901335 5751525 6566628..6567602 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_4044 transcriptional regulator, LysR family; LysR family transcriptional regulator 6567602 5751525 Daci_5904 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001566917.1 6566628 D 398578 CDS YP_001566918.1 160901336 5751526 complement(6567729..6568961) 1 NC_010002.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 6568961 5751526 Daci_5905 Delftia acidovorans SPH-1 tyrosyl-tRNA synthetase YP_001566918.1 6567729 R 398578 CDS YP_001566919.1 160901337 5751527 6569129..6570523 1 NC_010002.1 PFAM: peptidase M23B; KEGG: ajs:Ajs_0631 peptidase M23B; peptidase M23B 6570523 5751527 Daci_5906 Delftia acidovorans SPH-1 peptidase M23B YP_001566919.1 6569129 D 398578 CDS YP_001566920.1 160901338 5751528 6570629..6571777 1 NC_010002.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 6571777 anmK 5751528 anmK Delftia acidovorans SPH-1 anhydro-N-acetylmuramic acid kinase YP_001566920.1 6570629 D 398578 CDS YP_001566921.1 160901339 5751529 complement(6571865..6573163) 1 NC_010002.1 PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: reu:Reut_B5339 xanthine/uracil/vitamin C permease:sulphate transporter; xanthine/uracil/vitamin C permease 6573163 5751529 Daci_5908 Delftia acidovorans SPH-1 xanthine/uracil/vitamin C permease YP_001566921.1 6571865 R 398578 CDS YP_001566922.1 160901340 5751530 complement(6573340..6575766) 1 NC_010002.1 KEGG: mpt:Mpe_A0798 xanthine dehydrogenase; TIGRFAM: xanthine dehydrogenase, molybdopterin binding subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; xanthine dehydrogenase, molybdopterin-binding subunit 6575766 5751530 Daci_5909 Delftia acidovorans SPH-1 xanthine dehydrogenase, molybdopterin-binding subunit YP_001566922.1 6573340 R 398578 CDS YP_001566923.1 160901341 5751531 complement(6575768..6577381) 1 NC_010002.1 TIGRFAM: xanthine dehydrogenase, small subunit; PFAM: ferredoxin; molybdopterin dehydrogenase FAD-binding; [2Fe-2S]-binding domain protein; CO dehydrogenase flavoprotein domain protein; KEGG: mpt:Mpe_A0799 putative xanthine dehydrogenase (subunit A) oxidoreductase protein; xanthine dehydrogenase small subunit 6577381 5751531 Daci_5910 Delftia acidovorans SPH-1 xanthine dehydrogenase small subunit YP_001566923.1 6575768 R 398578 CDS YP_001566924.1 160901342 5751532 complement(6577661..6579103) 1 NC_010002.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_2090 major facilitator superfamily MFS_1; EmrB/QacA family drug resistance transporter 6579103 5751532 Daci_5911 Delftia acidovorans SPH-1 EmrB/QacA family drug resistance transporter YP_001566924.1 6577661 R 398578 CDS YP_001566925.1 160901343 5751533 complement(6579220..6579594) 1 NC_010002.1 essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors; iron-sulfur cluster insertion protein ErpA 6579594 5751533 Daci_5912 Delftia acidovorans SPH-1 iron-sulfur cluster insertion protein ErpA YP_001566925.1 6579220 R 398578 CDS YP_001566926.1 160901344 5751534 complement(6579809..6580201) 1 NC_010002.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 6580201 rpsI 5751534 rpsI Delftia acidovorans SPH-1 30S ribosomal protein S9 YP_001566926.1 6579809 R 398578 CDS YP_001566927.1 160901345 5751535 complement(6580212..6580640) 1 NC_010002.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 6580640 rplM 5751535 rplM Delftia acidovorans SPH-1 50S ribosomal protein L13 YP_001566927.1 6580212 R 398578 CDS YP_001566928.1 160901346 5751536 6580889..6581761 1 NC_010002.1 PFAM: protein of unknown function DUF519; KEGG: vei:Veis_1788 protein of unknown function DUF519; hypothetical protein 6581761 5751536 Daci_5915 Delftia acidovorans SPH-1 hypothetical protein YP_001566928.1 6580889 D 398578 CDS YP_001566929.1 160901347 5751537 complement(6581769..6582680) 1 NC_010002.1 TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: ajs:Ajs_0622 rare lipoprotein A; rare lipoprotein A 6582680 5751537 Daci_5916 Delftia acidovorans SPH-1 rare lipoprotein A YP_001566929.1 6581769 R 398578 CDS YP_001566930.1 160901348 5751538 complement(6582759..6583586) 1 NC_010002.1 KEGG: ajs:Ajs_0620 5,10-methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase 6583586 5751538 Daci_5917 Delftia acidovorans SPH-1 5,10-methylenetetrahydrofolate reductase YP_001566930.1 6582759 R 398578 CDS YP_001566931.1 160901349 5751539 complement(6583609..6584811) 1 NC_010002.1 PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: ajs:Ajs_0619 ribosomal RNA methyltransferase RrmJ/FtsJ; ribosomal RNA methyltransferase RrmJ/FtsJ 6584811 5751539 Daci_5918 Delftia acidovorans SPH-1 ribosomal RNA methyltransferase RrmJ/FtsJ YP_001566931.1 6583609 R 398578 CDS YP_001566932.1 160901350 5751540 complement(6584969..6586399) 1 NC_010002.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase 6586399 5751540 Daci_5919 Delftia acidovorans SPH-1 S-adenosyl-L-homocysteine hydrolase YP_001566932.1 6584969 R 398578 CDS YP_001566933.1 160901351 5751541 complement(6586562..6587305) 1 NC_010002.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pfl:PFL_4569 KDP operon transcriptional regulatory protein KdpE; two component transcriptional regulator 6587305 5751541 Daci_5920 Delftia acidovorans SPH-1 two component transcriptional regulator YP_001566933.1 6586562 R 398578 CDS YP_001566934.1 160901352 5751542 complement(6587332..6590046) 1 NC_010002.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Osmosensitive K channel His kinase sensor; UspA domain protein; KEGG: pfl:PFL_4570 sensor histidine kinase KdpD; osmosensitive K+ channel signal transduction histidine kinase 6590046 5751542 Daci_5921 Delftia acidovorans SPH-1 osmosensitive K+ channel signal transduction histidine kinase YP_001566934.1 6587332 R 398578 CDS YP_001566935.1 160901353 5751543 complement(6590081..6590944) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: mms:mma_0168 hypothetical protein; hypothetical protein 6590944 5751543 Daci_5922 Delftia acidovorans SPH-1 hypothetical protein YP_001566935.1 6590081 R 398578 CDS YP_001566936.1 160901354 5751544 complement(6591028..6593112) 1 NC_010002.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase, B subunit; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: pfl:PFL_4571 K+-transporting ATPase, B subunit; K+-transporting ATPase subunit B 6593112 5751544 Daci_5923 Delftia acidovorans SPH-1 K+-transporting ATPase subunit B YP_001566936.1 6591028 R 398578 CDS YP_001566937.1 160901355 5751545 complement(6593116..6593850) 1 NC_010002.1 KEGG: pfl:PFL_4572 K+-transporting ATPase, C subunit; TIGRFAM: potassium-transporting ATPase, C subunit; PFAM: K transporting ATPase KdpC subunit; potassium-transporting ATPase subunit C 6593850 5751545 Daci_5924 Delftia acidovorans SPH-1 potassium-transporting ATPase subunit C YP_001566937.1 6593116 R 398578 CDS YP_001566938.1 160901356 5751546 complement(6593929..6595635) 1 NC_010002.1 catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit A 6595635 5751546 Daci_5925 Delftia acidovorans SPH-1 potassium-transporting ATPase subunit A YP_001566938.1 6593929 R 398578 CDS YP_001566939.1 160901357 5751547 6596065..6597762 1 NC_010002.1 stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3 6597762 prfC 5751547 prfC Delftia acidovorans SPH-1 peptide chain release factor 3 YP_001566939.1 6596065 D 398578 CDS YP_001566940.1 160901358 5751548 6597793..6599784 1 NC_010002.1 KEGG: aav:Aave_4066 hypothetical protein; hypothetical protein 6599784 5751548 Daci_5927 Delftia acidovorans SPH-1 hypothetical protein YP_001566940.1 6597793 D 398578 CDS YP_001566941.1 160901359 5751549 6599781..6600848 1 NC_010002.1 KEGG: aav:Aave_4063 hypothetical protein; hypothetical protein 6600848 5751549 Daci_5928 Delftia acidovorans SPH-1 hypothetical protein YP_001566941.1 6599781 D 398578 CDS YP_001566942.1 160901360 5751550 6601179..6601526 1 NC_010002.1 KEGG: aav:Aave_4064 hypothetical protein; hypothetical protein 6601526 5751550 Daci_5929 Delftia acidovorans SPH-1 hypothetical protein YP_001566942.1 6601179 D 398578 CDS YP_001566943.1 160901361 5751551 6601536..6602495 1 NC_010002.1 PFAM: glycosyl transferase family 2; KEGG: aav:Aave_4065 glycosyl transferase, family 2; glycosyl transferase family protein 6602495 5751551 Daci_5930 Delftia acidovorans SPH-1 glycosyl transferase family protein YP_001566943.1 6601536 D 398578 CDS YP_001566944.1 160901362 5751552 6602547..6604421 1 NC_010002.1 KEGG: vei:Veis_0689 hypothetical protein; hypothetical protein 6604421 5751552 Daci_5931 Delftia acidovorans SPH-1 hypothetical protein YP_001566944.1 6602547 D 398578 CDS YP_001566945.1 160901363 5751553 6604508..6605305 1 NC_010002.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; KEGG: ajs:Ajs_0616 HAD-superfamily hydrolase, subfamily IIB; HAD family hydrolase 6605305 5751553 Daci_5932 Delftia acidovorans SPH-1 HAD family hydrolase YP_001566945.1 6604508 D 398578 CDS YP_001566946.1 160901364 5751554 6605949..6606536 1 NC_010002.1 PFAM: Fimbrial protein; KEGG: reu:Reut_A1694 fimbrial protein; fimbrial protein 6606536 5751554 Daci_5933 Delftia acidovorans SPH-1 fimbrial protein YP_001566946.1 6605949 D 398578 CDS YP_001566947.1 160901365 5751555 6606650..6607411 1 NC_010002.1 PFAM: pili assembly chaperone; KEGG: bam:Bamb_4023 pili assembly chaperone; pili assembly chaperone 6607411 5751555 Daci_5934 Delftia acidovorans SPH-1 pili assembly chaperone YP_001566947.1 6606650 D 398578 CDS YP_001566948.1 160901366 5751556 6607614..6610736 1 NC_010002.1 PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: bam:Bamb_4024 fimbrial biogenesis outer membrane usher protein; fimbrial biogenesis outer membrane usher protein 6610736 5751556 Daci_5935 Delftia acidovorans SPH-1 fimbrial biogenesis outer membrane usher protein YP_001566948.1 6607614 D 398578 CDS YP_001566949.1 160901367 5751557 6611543..6612097 1 NC_010002.1 PFAM: Fimbrial protein; KEGG: ent:Ent638_0987 fimbrial protein; fimbrial protein 6612097 5751557 Daci_5936 Delftia acidovorans SPH-1 fimbrial protein YP_001566949.1 6611543 D 398578 CDS YP_001566950.1 160901368 5751558 6612202..6612984 1 NC_010002.1 PFAM: pili assembly chaperone; KEGG: bam:Bamb_4023 pili assembly chaperone; pili assembly chaperone 6612984 5751558 Daci_5937 Delftia acidovorans SPH-1 pili assembly chaperone YP_001566950.1 6612202 D 398578 CDS YP_001566951.1 160901369 5751559 6613099..6615990 1 NC_010002.1 PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: bam:Bamb_4024 fimbrial biogenesis outer membrane usher protein; fimbrial biogenesis outer membrane usher protein 6615990 5751559 Daci_5938 Delftia acidovorans SPH-1 fimbrial biogenesis outer membrane usher protein YP_001566951.1 6613099 D 398578 CDS YP_001566952.1 160901370 5751560 6616106..6616894 1 NC_010002.1 hypothetical protein 6616894 5751560 Daci_5939 Delftia acidovorans SPH-1 hypothetical protein YP_001566952.1 6616106 D 398578 CDS YP_001566953.1 160901371 5751561 6617045..6618052 1 NC_010002.1 PFAM: Fimbrial protein; KEGG: spe:Spro_2875 fimbrial protein; fimbrial protein 6618052 5751561 Daci_5940 Delftia acidovorans SPH-1 fimbrial protein YP_001566953.1 6617045 D 398578 CDS YP_001566954.1 160901372 5751562 6618224..6622261 1 NC_010002.1 proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus; forms dimers and is a peripherally membrane-associated protein; trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 6622261 putA 5751562 putA Delftia acidovorans SPH-1 trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase YP_001566954.1 6618224 D 398578 CDS YP_001566955.1 160901373 5751563 6622341..6623843 1 NC_010002.1 TIGRFAM: SSS sodium solute transporter superfamily; sodium/proline symporter; PFAM: Na+/solute symporter; KEGG: ajs:Ajs_4063 sodium/proline symporter; sodium/proline symporter 6623843 5751563 Daci_5942 Delftia acidovorans SPH-1 sodium/proline symporter YP_001566955.1 6622341 D 398578 CDS YP_001566956.1 160901374 5751564 6624141..6625127 1 NC_010002.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: aav:Aave_3447 TRAP dicarboxylate transporter, DctP subunit; TRAP dicarboxylate transporter subunit DctP 6625127 5751564 Daci_5943 Delftia acidovorans SPH-1 TRAP dicarboxylate transporter subunit DctP YP_001566956.1 6624141 D 398578 CDS YP_001566957.1 160901375 5751565 6625275..6625790 1 NC_010002.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: aav:Aave_3446 tripartite ATP-independent periplasmic transporter, DctQ component; tripartite ATP-independent periplasmic transporter DctQ 6625790 5751565 Daci_5944 Delftia acidovorans SPH-1 tripartite ATP-independent periplasmic transporter DctQ YP_001566957.1 6625275 D 398578 CDS YP_001566958.1 160901376 5751566 6625940..6627226 1 NC_010002.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: aav:Aave_3445 TRAP dicarboxylate transporter, DctM subunit; TRAP dicarboxylate transporter subunit DctM 6627226 5751566 Daci_5945 Delftia acidovorans SPH-1 TRAP dicarboxylate transporter subunit DctM YP_001566958.1 6625940 D 398578 CDS YP_001566959.1 160901377 5751567 complement(6627264..6628064) 1 NC_010002.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bxe:Bxe_B0696 transcriptional regulator, IclR family; IclR family transcriptional regulator 6628064 5751567 Daci_5946 Delftia acidovorans SPH-1 IclR family transcriptional regulator YP_001566959.1 6627264 R 398578 CDS YP_001566960.1 160901378 5751568 6628230..6629882 1 NC_010002.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: vei:Veis_4282 glucose-methanol-choline oxidoreductase; glucose-methanol-choline oxidoreductase 6629882 5751568 Daci_5947 Delftia acidovorans SPH-1 glucose-methanol-choline oxidoreductase YP_001566960.1 6628230 D 398578 CDS YP_001566961.1 160901379 5751569 6629931..6631259 1 NC_010002.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: vei:Veis_4283 major facilitator superfamily MFS_1; major facilitator transporter 6631259 5751569 Daci_5948 Delftia acidovorans SPH-1 major facilitator transporter YP_001566961.1 6629931 D 398578 CDS YP_001566962.1 160901380 5751570 6631440..6632300 1 NC_010002.1 KEGG: aav:Aave_0186 hypothetical protein; hypothetical protein 6632300 5751570 Daci_5949 Delftia acidovorans SPH-1 hypothetical protein YP_001566962.1 6631440 D 398578 CDS YP_001566963.1 160901381 5751571 complement(6632323..6633288) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pol:Bpro_4251 transcriptional regulator, LysR family; LysR family transcriptional regulator 6633288 5751571 Daci_5950 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001566963.1 6632323 R 398578 CDS YP_001566964.1 160901382 5751572 6633418..6634596 1 NC_010002.1 PFAM: major facilitator superfamily MFS_1; KEGG: pol:Bpro_4250 major facilitator superfamily MFS_1; major facilitator transporter 6634596 5751572 Daci_5951 Delftia acidovorans SPH-1 major facilitator transporter YP_001566964.1 6633418 D 398578 CDS YP_001566965.1 160901383 5751573 complement(6634600..6640554) 1 NC_010002.1 KEGG: aav:Aave_4341 excinuclease ABC, A subunit; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; SMART: AAA ATPase; excinuclease ABC subunit A 6640554 5751573 Daci_5952 Delftia acidovorans SPH-1 excinuclease ABC subunit A YP_001566965.1 6634600 R 398578 CDS YP_001566966.1 160901384 5751574 complement(6640733..6640852) 1 NC_010002.1 hypothetical protein 6640852 5751574 Daci_5953 Delftia acidovorans SPH-1 hypothetical protein YP_001566966.1 6640733 R 398578 CDS YP_001566967.1 160901385 5751575 complement(6640990..6641973) 1 NC_010002.1 KEGG: ajs:Ajs_3751 porin, gram-negative type; porin 6641973 5751575 Daci_5954 Delftia acidovorans SPH-1 porin YP_001566967.1 6640990 R 398578 CDS YP_001566968.1 160901386 5751576 complement(6642379..6644061) 1 NC_010002.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: aav:Aave_4345 major facilitator superfamily MFS_1; general substrate transporter 6644061 5751576 Daci_5955 Delftia acidovorans SPH-1 general substrate transporter YP_001566968.1 6642379 R 398578 CDS YP_001566969.1 160901387 5751577 6644365..6644673 1 NC_010002.1 PFAM: protein of unknown function DUF485; KEGG: bur:Bcep18194_B1981 protein of unknown function DUF485; hypothetical protein 6644673 5751577 Daci_5956 Delftia acidovorans SPH-1 hypothetical protein YP_001566969.1 6644365 D 398578 CDS YP_001566970.1 160901388 5751578 6644670..6646403 1 NC_010002.1 TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: pnu:Pnuc_0535 SSS sodium solute transporter superfamily; SSS family solute/sodium (Na+) symporter 6646403 5751578 Daci_5957 Delftia acidovorans SPH-1 SSS family solute/sodium (Na+) symporter YP_001566970.1 6644670 D 398578 CDS YP_001566971.1 160901389 5751579 6646621..6647256 1 NC_010002.1 PFAM: PEBP family protein; KEGG: aav:Aave_4694 PEBP family protein; PEBP family protein 6647256 5751579 Daci_5958 Delftia acidovorans SPH-1 PEBP family protein YP_001566971.1 6646621 D 398578 CDS YP_001566972.1 160901390 5751580 complement(6647278..6647916) 1 NC_010002.1 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 6647916 5751580 Daci_5959 Delftia acidovorans SPH-1 DNA polymerase III subunit epsilon YP_001566972.1 6647278 R 398578 CDS YP_001566973.1 160901391 5751581 complement(6647928..6649781) 1 NC_010002.1 PFAM: cyclic nucleotide-binding; CBS domain containing protein; protein of unknown function DUF294 nucleotidyltransferase putative; KEGG: pna:Pnap_0480 cyclic nucleotide-binding protein; hypothetical protein 6649781 5751581 Daci_5960 Delftia acidovorans SPH-1 hypothetical protein YP_001566973.1 6647928 R 398578 CDS YP_001566974.1 160901392 5751582 complement(6649782..6650417) 1 NC_010002.1 PFAM: DSBA oxidoreductase; KEGG: ajs:Ajs_3753 DsbA oxidoreductase; DSBA oxidoreductase 6650417 5751582 Daci_5961 Delftia acidovorans SPH-1 DSBA oxidoreductase YP_001566974.1 6649782 R 398578 CDS YP_001566975.1 160901393 5751583 complement(6650441..6650686) 1 NC_010002.1 PFAM: protein of unknown function DUF1289; KEGG: ajs:Ajs_3754 protein of unknown function DUF1289; hypothetical protein 6650686 5751583 Daci_5962 Delftia acidovorans SPH-1 hypothetical protein YP_001566975.1 6650441 R 398578 CDS YP_001566976.1 160901394 5751584 complement(6650683..6651186) 1 NC_010002.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: aav:Aave_4348 YbaK/prolyl-tRNA synthetase associated region; YbaK/prolyl-tRNA synthetase associated domain-containing protein 6651186 5751584 Daci_5963 Delftia acidovorans SPH-1 YbaK/prolyl-tRNA synthetase associated domain-containing protein YP_001566976.1 6650683 R 398578 CDS YP_001566977.1 160901395 5751585 complement(6651189..6652130) 1 NC_010002.1 PFAM: pyruvate carboxyltransferase; KEGG: ajs:Ajs_3757 pyruvate carboxyltransferase; pyruvate carboxyltransferase 6652130 5751585 Daci_5964 Delftia acidovorans SPH-1 pyruvate carboxyltransferase YP_001566977.1 6651189 R 398578 CDS YP_001566978.1 160901396 5751586 complement(6652240..6653148) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bbr:BB2439 probable LysR-family transcriptional regulator; LysR family transcriptional regulator 6653148 5751586 Daci_5965 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001566978.1 6652240 R 398578 CDS YP_001566979.1 160901397 5751587 6653240..6654202 1 NC_010002.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: bbr:BB2438 probable 3-hydroxybutyryl-CoA dehydrogenase; NAD-binding 3-hydroxyacyl-CoA dehydrogenase 6654202 5751587 Daci_5966 Delftia acidovorans SPH-1 NAD-binding 3-hydroxyacyl-CoA dehydrogenase YP_001566979.1 6653240 D 398578 CDS YP_001566980.1 160901398 5751588 6654199..6655053 1 NC_010002.1 PFAM: protein of unknown function DUF849; KEGG: vei:Veis_0513 protein of unknown function DUF849; hypothetical protein 6655053 5751588 Daci_5967 Delftia acidovorans SPH-1 hypothetical protein YP_001566980.1 6654199 D 398578 CDS YP_001566981.1 160901399 5751589 6655162..6656196 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: bbr:BB1095 hypothetical protein; hypothetical protein 6656196 5751589 Daci_5968 Delftia acidovorans SPH-1 hypothetical protein YP_001566981.1 6655162 D 398578 CDS YP_001566982.1 160901400 5751590 complement(6656206..6657126) 1 NC_010002.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: ajs:Ajs_3758 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 6657126 5751590 Daci_5969 Delftia acidovorans SPH-1 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_001566982.1 6656206 R 398578 CDS YP_001566983.1 160901401 5751591 complement(6657197..6659215) 1 NC_010002.1 PFAM: biotin/lipoyl attachment domain-containing protein; phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: ajs:Ajs_3759 carbamoyl-phosphate synthase L chain, ATP-binding; carbamoyl-phosphate synthase subunit L 6659215 5751591 Daci_5970 Delftia acidovorans SPH-1 carbamoyl-phosphate synthase subunit L YP_001566983.1 6657197 R 398578 CDS YP_001566984.1 160901402 5751592 complement(6659267..6660016) 1 NC_010002.1 KEGG: ajs:Ajs_3760 putative transmembrane protein; putative transmembrane protein 6660016 5751592 Daci_5971 Delftia acidovorans SPH-1 putative transmembrane protein YP_001566984.1 6659267 R 398578 CDS YP_001566985.1 160901403 5751593 complement(6660083..6660868) 1 NC_010002.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ajs:Ajs_3761 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 6660868 5751593 Daci_5972 Delftia acidovorans SPH-1 enoyl-CoA hydratase/isomerase YP_001566985.1 6660083 R 398578 CDS YP_001566986.1 160901404 5751594 complement(6660903..6662510) 1 NC_010002.1 PFAM: carboxyl transferase; KEGG: ajs:Ajs_3763 propionyl-CoA carboxylase; propionyl-CoA carboxylase 6662510 5751594 Daci_5973 Delftia acidovorans SPH-1 propionyl-CoA carboxylase YP_001566986.1 6660903 R 398578 CDS YP_001566987.1 160901405 5751595 6662603..6664336 1 NC_010002.1 TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; KEGG: bxe:Bxe_B1516 Na+/H+ antiporter, CPA1 family; Na+/H+ antiporter 6664336 5751595 Daci_5974 Delftia acidovorans SPH-1 Na+/H+ antiporter YP_001566987.1 6662603 D 398578 CDS YP_001566988.1 160901406 5751596 complement(6664381..6666099) 1 NC_010002.1 activates fatty acids by binding to coenzyme A; AMP-binding domain-containing protein 6666099 5751596 Daci_5975 Delftia acidovorans SPH-1 AMP-binding domain-containing protein YP_001566988.1 6664381 R 398578 CDS YP_001566989.1 160901407 5751597 6666338..6667312 1 NC_010002.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pna:Pnap_0469 helix-turn-helix-domain containing protein, AraC type; AraC family transcriptional regulator 6667312 5751597 Daci_5976 Delftia acidovorans SPH-1 AraC family transcriptional regulator YP_001566989.1 6666338 D 398578 CDS YP_001566990.1 160901408 5751598 6667388..6668053 1 NC_010002.1 PFAM: Glutathione S-transferase domain; KEGG: ajs:Ajs_3767 glutathione S-transferase, N-terminal domain; glutathione S-transferase domain-containing protein 6668053 5751598 Daci_5977 Delftia acidovorans SPH-1 glutathione S-transferase domain-containing protein YP_001566990.1 6667388 D 398578 CDS YP_001566991.1 160901409 5751599 complement(6668091..6668783) 1 NC_010002.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: aav:Aave_4360 HAD-superfamily hydrolase, subfamily IA, variant 3; HAD family hydrolase 6668783 5751599 Daci_5978 Delftia acidovorans SPH-1 HAD family hydrolase YP_001566991.1 6668091 R 398578 CDS YP_001566992.1 160901410 5751600 complement(6668883..6669935) 1 NC_010002.1 KEGG: aav:Aave_3538 hypothetical protein; hypothetical protein 6669935 5751600 Daci_5979 Delftia acidovorans SPH-1 hypothetical protein YP_001566992.1 6668883 R 398578 CDS YP_001566993.1 160901411 5751601 6670123..6670860 1 NC_010002.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: aav:Aave_2497 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 6670860 5751601 Daci_5980 Delftia acidovorans SPH-1 two component LuxR family transcriptional regulator YP_001566993.1 6670123 D 398578 CDS YP_001566994.1 160901412 5751602 complement(6670830..6672689) 1 NC_010002.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: aav:Aave_4361 integral membrane sensor hybrid histidine kinase; histidine kinase 6672689 5751602 Daci_5981 Delftia acidovorans SPH-1 histidine kinase YP_001566994.1 6670830 R 398578 CDS YP_001566995.1 160901413 5751603 complement(6672673..6673086) 1 NC_010002.1 KEGG: aav:Aave_4362 hypothetical protein; hypothetical protein 6673086 5751603 Daci_5982 Delftia acidovorans SPH-1 hypothetical protein YP_001566995.1 6672673 R 398578 CDS YP_001566996.1 160901414 5751604 6673253..6673750 1 NC_010002.1 KEGG: aav:Aave_4363 hypothetical protein; hypothetical protein 6673750 5751604 Daci_5983 Delftia acidovorans SPH-1 hypothetical protein YP_001566996.1 6673253 D 398578 CDS YP_001566997.1 160901415 5751605 complement(6673772..6674674) 1 NC_010002.1 PFAM: alpha/beta hydrolase fold; Ndr family protein; KEGG: rfr:Rfer_2846 alpha/beta hydrolase; alpha/beta hydrolase fold protein 6674674 5751605 Daci_5984 Delftia acidovorans SPH-1 alpha/beta hydrolase fold protein YP_001566997.1 6673772 R 398578 CDS YP_001566998.1 160901416 5751606 complement(6674706..6675836) 1 NC_010002.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_3774 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 6675836 5751606 Daci_5985 Delftia acidovorans SPH-1 acyl-CoA dehydrogenase domain-containing protein YP_001566998.1 6674706 R 398578 CDS YP_001566999.1 160901417 5751607 complement(6675903..6676565) 1 NC_010002.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ajs:Ajs_3775 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase 6676565 5751607 Daci_5986 Delftia acidovorans SPH-1 short chain dehydrogenase YP_001566999.1 6675903 R 398578 CDS YP_001567000.1 160901418 5751608 complement(6676594..6677217) 1 NC_010002.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: xau:Xaut_1318 pyridoxamine 5'-phosphate oxidase-related FMN-binding; FMN-binding pyridoxamine 5'-phosphate oxidase-like protein 6677217 5751608 Daci_5987 Delftia acidovorans SPH-1 FMN-binding pyridoxamine 5'-phosphate oxidase-like protein YP_001567000.1 6676594 R 398578 CDS YP_001567001.1 160901419 5751609 complement(6677270..6678451) 1 NC_010002.1 KEGG: ajs:Ajs_3776 acetyl-CoA acetyltransferases; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase 6678451 5751609 Daci_5988 Delftia acidovorans SPH-1 acetyl-CoA acetyltransferase YP_001567001.1 6677270 R 398578 CDS YP_001567002.1 160901420 5751610 complement(6678498..6680285) 1 NC_010002.1 catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity; unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol; bifunctional isocitrate dehydrogenase kinase/phosphatase protein 6680285 aceK 5751610 aceK Delftia acidovorans SPH-1 bifunctional isocitrate dehydrogenase kinase/phosphatase protein YP_001567002.1 6678498 R 398578 CDS YP_001567003.1 160901421 5751611 complement(6680319..6680981) 1 NC_010002.1 PFAM: carbonic anhydrase; KEGG: ajs:Ajs_3778 carbonate dehydratase; carbonate dehydratase 6680981 5751611 Daci_5990 Delftia acidovorans SPH-1 carbonate dehydratase YP_001567003.1 6680319 R 398578 CDS YP_001567004.1 160901422 5751612 complement(6681038..6682225) 1 NC_010002.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_3779 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 6682225 5751612 Daci_5991 Delftia acidovorans SPH-1 acyl-CoA dehydrogenase domain-containing protein YP_001567004.1 6681038 R 398578 CDS YP_001567005.1 160901423 5751613 complement(6682269..6682727) 1 NC_010002.1 PFAM: thioesterase superfamily protein; KEGG: bov:BOV_A0326 hypothetical protein; thioesterase superfamily protein 6682727 5751613 Daci_5992 Delftia acidovorans SPH-1 thioesterase superfamily protein YP_001567005.1 6682269 R 398578 CDS YP_001567006.1 160901424 5751614 complement(6682764..6683186) 1 NC_010002.1 PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: ajs:Ajs_3780 putative transcriptional regulator, MerR family; MerR family transcriptional regulator 6683186 5751614 Daci_5993 Delftia acidovorans SPH-1 MerR family transcriptional regulator YP_001567006.1 6682764 R 398578 CDS YP_001567007.1 160901425 5751625 complement(6694867..6695817) 1 NC_010002.1 catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 6695817 5751625 Daci_5994 Delftia acidovorans SPH-1 glutathione synthetase YP_001567007.1 6694867 R 398578 CDS YP_001567008.1 160901426 5751626 complement(6695898..6697079) 1 NC_010002.1 TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; KEGG: ajs:Ajs_3908 benzoate transporter; benzoate transporter 6697079 5751626 Daci_5995 Delftia acidovorans SPH-1 benzoate transporter YP_001567008.1 6695898 R 398578 CDS YP_001567009.1 160901427 5751627 complement(6697130..6699013) 1 NC_010002.1 PFAM: K potassium transporter; KEGG: aav:Aave_4541 K+ potassium transporter; K potassium transporter 6699013 5751627 Daci_5996 Delftia acidovorans SPH-1 K potassium transporter YP_001567009.1 6697130 R 398578 CDS YP_001567010.1 160901428 5751628 complement(6699096..6700391) 1 NC_010002.1 TIGRFAM: glutamate--cysteine ligase; PFAM: glutamate--cysteine ligase GshA; KEGG: ajs:Ajs_3910 glutamate--cysteine ligase; glutamate--cysteine ligase 6700391 5751628 Daci_5997 Delftia acidovorans SPH-1 glutamate--cysteine ligase YP_001567010.1 6699096 R 398578 CDS YP_001567011.1 160901429 5751629 complement(6700473..6701939) 1 NC_010002.1 PFAM: cation transporter; KEGG: ajs:Ajs_3911 cation transporter; cation transporter 6701939 5751629 Daci_5998 Delftia acidovorans SPH-1 cation transporter YP_001567011.1 6700473 R 398578 CDS YP_001567012.1 160901430 5751630 complement(6701950..6703407) 1 NC_010002.1 involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; potassium transporter peripheral membrane protein 6703407 trkA 5751630 trkA Delftia acidovorans SPH-1 potassium transporter peripheral membrane protein YP_001567012.1 6701950 R 398578 CDS YP_001567013.1 160901431 5751631 complement(6703497..6704777) 1 NC_010002.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 6704777 proA 5751631 proA Delftia acidovorans SPH-1 gamma-glutamyl phosphate reductase YP_001567013.1 6703497 R 398578 CDS YP_001567014.1 160901432 5751632 complement(6705279..6706331) 1 NC_010002.1 required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta 6706331 holA 5751632 holA Delftia acidovorans SPH-1 DNA polymerase III subunit delta YP_001567014.1 6705279 R 398578 CDS YP_001567015.1 160901433 5751633 complement(6706337..6706843) 1 NC_010002.1 PFAM: Rare lipoprotein B; KEGG: ajs:Ajs_3916 rare lipoprotein B; rare lipoprotein B 6706843 5751633 Daci_6002 Delftia acidovorans SPH-1 rare lipoprotein B YP_001567015.1 6706337 R 398578 CDS YP_001567016.1 160901434 5751634 complement(6706888..6709623) 1 NC_010002.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 6709623 leuS 5751634 leuS Delftia acidovorans SPH-1 leucyl-tRNA synthetase YP_001567016.1 6706888 R 398578 CDS YP_001567017.1 160901435 5751635 6709947..6711200 1 NC_010002.1 PFAM: MscS Mechanosensitive ion channel; KEGG: ajs:Ajs_3919 MscS mechanosensitive ion channel; mechanosensitive ion channel protein MscS 6711200 5751635 Daci_6004 Delftia acidovorans SPH-1 mechanosensitive ion channel protein MscS YP_001567017.1 6709947 D 398578 CDS YP_001567018.1 160901436 5751636 complement(6711228..6711707) 1 NC_010002.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: aav:Aave_4551 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 6711707 5751636 Daci_6005 Delftia acidovorans SPH-1 biopolymer transport protein ExbD/TolR YP_001567018.1 6711228 R 398578 CDS YP_001567019.1 160901437 5751637 complement(6711732..6712466) 1 NC_010002.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: ajs:Ajs_3921 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 6712466 5751637 Daci_6006 Delftia acidovorans SPH-1 MotA/TolQ/ExbB proton channel YP_001567019.1 6711732 R 398578 CDS YP_001567020.1 160901438 5751638 complement(6712531..6713367) 1 NC_010002.1 PFAM: oxidoreductase domain protein; dihydrodipicolinate reductase; KEGG: ajs:Ajs_3922 dihydrodipicolinate reductase; dihydrodipicolinate reductase 6713367 5751638 Daci_6007 Delftia acidovorans SPH-1 dihydrodipicolinate reductase YP_001567020.1 6712531 R 398578 CDS YP_001567021.1 160901439 5751639 complement(6713492..6714073) 1 NC_010002.1 PFAM: SmpA/OmlA domain protein; KEGG: aav:Aave_4554 SmpA/OmlA domain protein; SmpA/OmlA domain-containing protein 6714073 5751639 Daci_6008 Delftia acidovorans SPH-1 SmpA/OmlA domain-containing protein YP_001567021.1 6713492 R 398578 CDS YP_001567022.1 160901440 5751640 6714156..6714623 1 NC_010002.1 PFAM: ferric-uptake regulator; KEGG: ajs:Ajs_3924 ferric uptake regulator, Fur family; ferric uptake regulator family protein 6714623 5751640 Daci_6009 Delftia acidovorans SPH-1 ferric uptake regulator family protein YP_001567022.1 6714156 D 398578 CDS YP_001567023.1 160901441 5751641 6714743..6716344 1 NC_010002.1 PFAM: Protein of unknown function DUF1800; KEGG: aav:Aave_2282 hypothetical protein; hypothetical protein 6716344 5751641 Daci_6010 Delftia acidovorans SPH-1 hypothetical protein YP_001567023.1 6714743 D 398578 CDS YP_001567024.1 160901442 5751642 6716362..6717576 1 NC_010002.1 PFAM: protein of unknown function DUF1501; KEGG: aav:Aave_2281 protein of unknown function DUF1501; hypothetical protein 6717576 5751642 Daci_6011 Delftia acidovorans SPH-1 hypothetical protein YP_001567024.1 6716362 D 398578 CDS YP_001567025.1 160901443 5751643 complement(6717585..6718526) 1 NC_010002.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bte:BTH_I0997 RNA polymerase sigma-70 factor, ECF family; ECF subfamily RNA polymerase sigma-24 factor 6718526 5751643 Daci_6012 Delftia acidovorans SPH-1 ECF subfamily RNA polymerase sigma-24 factor YP_001567025.1 6717585 R 398578 CDS YP_001567026.1 160901444 5751644 complement(6718597..6719097) 1 NC_010002.1 PFAM: NUDIX hydrolase; KEGG: ajs:Ajs_4074 NUDIX hydrolase; NUDIX hydrolase 6719097 5751644 Daci_6013 Delftia acidovorans SPH-1 NUDIX hydrolase YP_001567026.1 6718597 R 398578 CDS YP_001567027.1 160901445 5751645 complement(6719186..6719764) 1 NC_010002.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ajs:Ajs_4076 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 6719764 5751645 Daci_6014 Delftia acidovorans SPH-1 N-acetyltransferase GCN5 YP_001567027.1 6719186 R 398578 CDS YP_001567028.1 160901446 5751646 complement(6719805..6720806) 1 NC_010002.1 PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: maq:Maqu_3676 response regulator receiver modulated metal dependent phosphohydrolase; response regulator receiver modulated metal dependent phosphohydrolase 6720806 5751646 Daci_6015 Delftia acidovorans SPH-1 response regulator receiver modulated metal dependent phosphohydrolase YP_001567028.1 6719805 R 398578 CDS YP_001567029.1 160901447 5751647 complement(6720803..6721399) 1 NC_010002.1 PFAM: Hpt domain protein; KEGG: cvi:CV_1190 probable sensor/response regulator hybrid; Hpt protein 6721399 5751647 Daci_6016 Delftia acidovorans SPH-1 Hpt protein YP_001567029.1 6720803 R 398578 CDS YP_001567030.1 160901448 5751648 complement(6721439..6724573) 1 NC_010002.1 KEGG: maq:Maqu_3675 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; MHYT domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor hybrid histidine kinase 6724573 5751648 Daci_6017 Delftia acidovorans SPH-1 PAS/PAC sensor hybrid histidine kinase YP_001567030.1 6721439 R 398578 CDS YP_001567031.1 160901449 5751649 6724685..6724981 1 NC_010002.1 KEGG: ajs:Ajs_4100 hypothetical protein; hypothetical protein 6724981 5751649 Daci_6018 Delftia acidovorans SPH-1 hypothetical protein YP_001567031.1 6724685 D 398578 CDS YP_001567032.1 160901450 5751650 complement(6725403..6726371) 1 NC_010002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_4102 transcriptional regulator, LysR family; LysR family transcriptional regulator 6726371 5751650 Daci_6019 Delftia acidovorans SPH-1 LysR family transcriptional regulator YP_001567032.1 6725403 R 398578 CDS YP_001567033.1 160901451 5751651 6726455..6727975 1 NC_010002.1 catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate; beta alanine--pyruvate transaminase 6727975 5751651 Daci_6020 Delftia acidovorans SPH-1 beta alanine--pyruvate transaminase YP_001567033.1 6726455 D 398578 CDS YP_001567034.1 160901452 5751652 complement(6728055..6729071) 1 NC_010002.1 PFAM: conserved hypothetical protein; KEGG: reu:Reut_B5589 hypothetical protein; hypothetical protein 6729071 5751652 Daci_6021 Delftia acidovorans SPH-1 hypothetical protein YP_001567034.1 6728055 R 398578 CDS YP_001567035.1 160901453 5751653 complement(6729184..6730200) 1 NC_010002.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: aav:Aave_4749 GntR domain protein; GntR family transcriptional regulator 6730200 5751653 Daci_6022 Delftia acidovorans SPH-1 GntR family transcriptional regulator YP_001567035.1 6729184 R 398578 CDS YP_001567036.1 160901454 5751654 6730445..6731650 1 NC_010002.1 KEGG: aav:Aave_4750 ABC branched chain amino acid family transporter, periplasmic ligand binding protein; branched chain amino acid ABC transporter periplasmic ligand-binding protein 6731650 5751654 Daci_6023 Delftia acidovorans SPH-1 branched chain amino acid ABC transporter periplasmic ligand-binding protein YP_001567036.1 6730445 D 398578 CDS YP_001567037.1 160901455 5751655 6731847..6732707 1 NC_010002.1 PFAM: inner-membrane translocator; KEGG: bxe:Bxe_B2565 ABC branched chain amino acid family transporter, inner membrane subunit; inner-membrane translocator 6732707 5751655 Daci_6024 Delftia acidovorans SPH-1 inner-membrane translocator YP_001567037.1 6731847 D 398578 CDS YP_001567038.1 160901456 5751656 6732704..6733705 1 NC_010002.1 PFAM: inner-membrane translocator; KEGG: aav:Aave_4752 inner-membrane translocator; inner-membrane translocator 6733705 5751656 Daci_6025 Delftia acidovorans SPH-1 inner-membrane translocator YP_001567038.1 6732704 D 398578 CDS YP_001567039.1 160901457 5751657 6733702..6734481 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_4753 ABC transporter-related protein; ABC transporter-like protein 6734481 5751657 Daci_6026 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001567039.1 6733702 D 398578 CDS YP_001567040.1 160901458 5751658 6734478..6735188 1 NC_010002.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_4754 ABC transporter-related protein; ABC transporter-like protein 6735188 5751658 Daci_6027 Delftia acidovorans SPH-1 ABC transporter-like protein YP_001567040.1 6734478 D 398578 CDS YP_001567041.1 160901459 5751659 6735221..6736516 1 NC_010002.1 KEGG: aav:Aave_4755 amidase, hydantoinase/carbamoylase family; TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20; amidase 6736516 5751659 Daci_6028 Delftia acidovorans SPH-1 amidase YP_001567041.1 6735221 D 398578 CDS YP_001567042.1 160901460 5751660 6736513..6737979 1 NC_010002.1 PFAM: MlrC domain protein; Microcystin LR degradation protein MlrC-like; KEGG: aav:Aave_4756 MlrC domain protein; MlrC domain-containing protein 6737979 5751660 Daci_6029 Delftia acidovorans SPH-1 MlrC domain-containing protein YP_001567042.1 6736513 D 398578 CDS YP_001567043.1 160901461 5751661 6738188..6740497 1 NC_010002.1 NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme 6740497 5751661 Daci_6030 Delftia acidovorans SPH-1 malic enzyme YP_001567043.1 6738188 D 398578 CDS YP_001567044.1 160901462 5751662 6740815..6741234 1 NC_010002.1 PFAM: guanine-specific ribonuclease N1 and T1; KEGG: aav:Aave_4760 guanine-specific ribonuclease N1 and T1; guanine-specific ribonuclease N1 and T1 6741234 5751662 Daci_6031 Delftia acidovorans SPH-1 guanine-specific ribonuclease N1 and T1 YP_001567044.1 6740815 D 398578 CDS YP_001567045.1 160901463 5751663 6741231..6741809 1 NC_010002.1 KEGG: ajs:Ajs_4108 hypothetical protein; hypothetical protein 6741809 5751663 Daci_6032 Delftia acidovorans SPH-1 hypothetical protein YP_001567045.1 6741231 D 398578 CDS YP_001567046.1 160901464 5751664 complement(6741890..6742696) 1 NC_010002.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 6742696 ksgA 5751664 ksgA Delftia acidovorans SPH-1 dimethyladenosine transferase YP_001567046.1 6741890 R 398578 CDS YP_001567047.1 160901465 5751665 complement(6742734..6744161) 1 NC_010002.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: ajs:Ajs_4111 PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain-containing protein 6744161 5751665 Daci_6034 Delftia acidovorans SPH-1 SurA domain-containing protein YP_001567047.1 6742734 R 398578 CDS YP_001567048.1 160901466 5751666 complement(6744203..6746527) 1 NC_010002.1 PFAM: Organic solvent tolerance protein; KEGG: aav:Aave_4764 organic solvent tolerance protein; organic solvent tolerance protein 6746527 5751666 Daci_6035 Delftia acidovorans SPH-1 organic solvent tolerance protein YP_001567048.1 6744203 R 398578 CDS YP_001567049.1 160901467 5751667 6746545..6747828 1 NC_010002.1 PFAM: aminoglycoside phosphotransferase; KEGG: aav:Aave_4765 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 6747828 5751667 Daci_6036 Delftia acidovorans SPH-1 aminoglycoside phosphotransferase YP_001567049.1 6746545 D 398578 CDS YP_001567050.1 160901468 5751668 6747842..6748594 1 NC_010002.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 6748594 5751668 Daci_6037 Delftia acidovorans SPH-1 16S ribosomal RNA methyltransferase RsmE YP_001567050.1 6747842 D 398578 CDS YP_001567051.1 160901469 5751669 complement(6748581..6749465) 1 NC_010002.1 PFAM: alpha/beta hydrolase fold; KEGG: ajs:Ajs_4120 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 6749465 5751669 Daci_6038 Delftia acidovorans SPH-1 alpha/beta hydrolase fold protein YP_001567051.1 6748581 R 398578 CDS YP_001567052.1 160901470 5751670 complement(6749465..6750991) 1 NC_010002.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: aav:Aave_4771 peptidase M20; peptidase M20 6750991 5751670 Daci_6039 Delftia acidovorans SPH-1 peptidase M20 YP_001567052.1 6749465 R 398578 CDS YP_001567053.1 160901471 5751671 6751096..6751482 1 NC_010002.1 PFAM: regulatory protein MerR; KEGG: azo:azo1478 probable MerR-family transcriptional regulator; MerR family transcriptional regulator 6751482 5751671 Daci_6040 Delftia acidovorans SPH-1 MerR family transcriptional regulator YP_001567053.1 6751096 D 398578 CDS YP_001567054.1 160901472 5751672 6751535..6752185 1 NC_010002.1 PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: ppf:Pput_2966 NAD(P)H dehydrogenase (quinone); NAD(P)H dehydrogenase 6752185 5751672 Daci_6041 Delftia acidovorans SPH-1 NAD(P)H dehydrogenase YP_001567054.1 6751535 D 398578 CDS YP_001567055.1 160901473 5751673 complement(6752169..6753389) 1 NC_010002.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: pna:Pnap_2092 glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 6753389 5751673 Daci_6042 Delftia acidovorans SPH-1 glycerophosphoryl diester phosphodiesterase YP_001567055.1 6752169 R 398578 CDS YP_001567056.1 160901474 5751674 complement(6753405..6753989) 1 NC_010002.1 TIGRFAM: methionine biosynthesis protein MetW; PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: aav:Aave_4777 methionine biosynthesis protein MetW; methionine biosynthesis protein MetW 6753989 5751674 Daci_6043 Delftia acidovorans SPH-1 methionine biosynthesis protein MetW YP_001567056.1 6753405 R 398578 CDS YP_001567057.1 160901475 5751675 complement(6753986..6755134) 1 NC_010002.1 Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine; homoserine O-acetyltransferase 6755134 metX 5751675 metX Delftia acidovorans SPH-1 homoserine O-acetyltransferase YP_001567057.1 6753986 R 398578 CDS YP_001567058.1 160901476 5751676 complement(6755241..6755855) 1 NC_010002.1 PFAM: protein of unknown function UPF0016; KEGG: aav:Aave_4779 protein of unknown function UPF0016; hypothetical protein 6755855 5751676 Daci_6045 Delftia acidovorans SPH-1 hypothetical protein YP_001567058.1 6755241 R 398578 CDS YP_001567059.1 160901477 5751677 6756313..6756687 1 NC_010002.1 PFAM: RNP-1 like RNA-binding protein; KEGG: vei:Veis_0149 RNP-1 like RNA-binding protein; RNP-1 like RNA-binding protein 6756687 5751677 Daci_6046 Delftia acidovorans SPH-1 RNP-1 like RNA-binding protein YP_001567059.1 6756313 D 398578 CDS YP_001567060.1 160901478 5751678 6756943..6757473 1 NC_010002.1 PFAM: RNP-1 like RNA-binding protein; KEGG: aav:Aave_4781 RNP-1-like RNA-binding protein; RNP-1 like RNA-binding protein 6757473 5751678 Daci_6047 Delftia acidovorans SPH-1 RNP-1 like RNA-binding protein YP_001567060.1 6756943 D 398578 CDS YP_001567061.1 160901479 5751679 complement(6757578..6758378) 1 NC_010002.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ajs:Ajs_4129 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase 6758378 5751679 Daci_6048 Delftia acidovorans SPH-1 short chain dehydrogenase YP_001567061.1 6757578 R 398578 CDS YP_001567062.1 160901480 5751680 complement(6758421..6759038) 1 NC_010002.1 PFAM: protein of unknown function DUF1239; KEGG: aav:Aave_4783 protein of unknown function DUF1239; hypothetical protein 6759038 5751680 Daci_6049 Delftia acidovorans SPH-1 hypothetical protein YP_001567062.1 6758421 R 398578 CDS YP_001567063.1 160901481 5751351 complement(6759035..6759595) 1 NC_010002.1 TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; KEGG: ajs:Ajs_4131 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 6759595 5751351 Daci_6050 Delftia acidovorans SPH-1 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YP_001567063.1 6759035 R 398578 CDS YP_001567064.1 160901482 5751688 complement(6759595..6760596) 1 NC_010002.1 KEGG: aav:Aave_4785 KpsF/GutQ family protein; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS); KpsF/GutQ family protein 6760596 5751688 Daci_6051 Delftia acidovorans SPH-1 KpsF/GutQ family protein YP_001567064.1 6759595 R 398578 CDS YP_001567065.1 160901483 5751689 6760694..6761251 1 NC_010002.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 6761251 5751689 Daci_6052 Delftia acidovorans SPH-1 adenine phosphoribosyltransferase YP_001567065.1 6760694 D 398578 CDS YP_001567066.1 160901484 5751681 complement(6761269..6762033) 1 NC_010002.1 KEGG: ajs:Ajs_4136 hypothetical protein; hypothetical protein 6762033 5751681 Daci_6053 Delftia acidovorans SPH-1 hypothetical protein YP_001567066.1 6761269 R 398578 CDS YP_001567067.1 160901485 5751682 complement(6762198..6762677) 1 NC_010002.1 PFAM: cyclic nucleotide-binding; KEGG: aav:Aave_4790 cyclic nucleotide-binding protein; cyclic nucleotide-binding protein 6762677 5751682 Daci_6054 Delftia acidovorans SPH-1 cyclic nucleotide-binding protein YP_001567067.1 6762198 R 398578 CDS YP_001567068.1 160901486 5751683 complement(6762896..6764317) 1 NC_010002.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 6764317 trmE 5751683 trmE Delftia acidovorans SPH-1 tRNA modification GTPase TrmE YP_001567068.1 6762896 R 398578 CDS YP_001567069.1 160901487 5751684 complement(6764417..6766129) 1 NC_010002.1 PFAM: 60 kDa inner membrane insertion protein; KEGG: ajs:Ajs_4140 60 kDa inner membrane insertion protein; 60 kDa inner membrane insertion protein 6766129 5751684 Daci_6056 Delftia acidovorans SPH-1 60 kDa inner membrane insertion protein YP_001567069.1 6764417 R 398578 CDS YP_001567070.1 160901488 5751685 complement(6766126..6766416) 1 NC_010002.1 PFAM: protein of unknown function DUF37; KEGG: aav:Aave_4794 protein of unknown function DUF37; hypothetical protein 6766416 5751685 Daci_6057 Delftia acidovorans SPH-1 hypothetical protein YP_001567070.1 6766126 R 398578 CDS YP_001567071.1 160901489 5751686 complement(6766413..6766922) 1 NC_010002.1 KEGG: ajs:Ajs_4142 hypothetical protein; hypothetical protein 6766922 5751686 Daci_6058 Delftia acidovorans SPH-1 hypothetical protein YP_001567071.1 6766413 R 398578 CDS YP_001567072.1 160901490 5751687 complement(6766981..6767115) 1 NC_010002.1 in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 6767115 rpmH 5751687 rpmH Delftia acidovorans SPH-1 50S ribosomal protein L34 YP_001567072.1 6766981 R 398578 CDS