-- dump date   	20140619_060705
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_001561033.1	binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.
YP_001561034.1	KEGG: aav:Aave_0002 DNA polymerase III, beta subunit; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain
YP_001561035.1	KEGG: ajs:Ajs_4146 DNA gyrase, B subunit; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase subunit B domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA topoisomerase type IIA subunit B region 2 domain protein; SMART: DNA topoisomerase II
YP_001561036.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: vei:Veis_4576 transcriptional regulator, LysR family
YP_001561037.1	PFAM: LamB/YcsF family protein; KEGG: vei:Veis_4577 LamB/YcsF family protein
YP_001561038.1	PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: vei:Veis_4578 biotin/lipoyl attachment domain-containing protein
YP_001561039.1	TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: vei:Veis_4579 carbamoyl-phosphate synthase L chain, ATP-binding
YP_001561040.1	PFAM: Allophanate hydrolase subunit 1; KEGG: bur:Bcep18194_A6283 allophanate hydrolase subunit 1
YP_001561041.1	KEGG: vei:Veis_4581 UreA amidolyase related protein; TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2
YP_001561042.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: reh:H16_A3377 predicted acyl-CoA transferase/carnitine dehydratase
YP_001561043.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_A3376 transcriptional regulator, LysR-family
YP_001561044.1	PFAM: conserved hypothetical protein; KEGG: rme:Rmet_3811 uncharacterized protein UPF0065
YP_001561045.1	PFAM: MaoC domain protein dehydratase; KEGG: rme:Rmet_3812 MaoC-like dehydratase
YP_001561046.1	PFAM: protein of unknown function UPF0153; KEGG: ajs:Ajs_4149 protein of unknown function UPF0153
YP_001561047.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mms:mma_0288 two-component sensor histidine kinase
YP_001561048.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mms:mma_0289 two-components system response regulator
YP_001561049.1	PFAM: outer membrane efflux protein; KEGG: mxa:MXAN_7436 outer membrane efflux protein
YP_001561050.1	TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: mxa:MXAN_7437 heavy metal efflux pump, CzcA family
YP_001561051.1	TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: mxa:MXAN_7438 putative cobalt-zinc-cadmium resistance protein
YP_001561053.1	helicase involved in DNA repair and perhaps also replication
YP_001561054.1	KEGG: aav:Aave_0023 hypothetical protein
YP_001561055.1	KEGG: ajs:Ajs_0007 hypothetical protein
YP_001561056.1	Required for efficient pilin antigenic variation
YP_001561057.1	catalyzes the formation of beta-ketovaleryl-CoA from acetyl-CoA and propionyl-CoA
YP_001561058.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rfr:Rfer_4068 enoyl-CoA hydratase/isomerase
YP_001561059.1	PFAM: AMP-dependent synthetase and ligase; KEGG: rfr:Rfer_4067 AMP-dependent synthetase and ligase
YP_001561060.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rfr:Rfer_4066 ABC transporter related
YP_001561061.1	PFAM: Extracellular ligand-binding receptor; KEGG: rfr:Rfer_4065 extracellular ligand-binding receptor
YP_001561062.1	PFAM: inner-membrane translocator; KEGG: rfr:Rfer_4064 inner-membrane translocator
YP_001561063.1	PFAM: inner-membrane translocator; KEGG: rfr:Rfer_4063 inner-membrane translocator
YP_001561064.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bpa:BPP2037 high-affinity branched-chain amino acid transport ATP-binding protein
YP_001561065.1	PFAM: regulatory protein TetR; KEGG: rfr:Rfer_4061 transcriptional regulator, TetR family
YP_001561066.1	TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: ajs:Ajs_0017 putative transcriptional regulator, MerR family
YP_001561067.1	PFAM: Heavy metal transport/detoxification protein; KEGG: vei:Veis_1021 heavy metal transport/detoxification protein
YP_001561068.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: aav:Aave_0035 methyl-accepting chemotaxis sensory transducer
YP_001561069.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: ajs:Ajs_0022 NADH:flavin oxidoreductase/NADH oxidase
YP_001561070.1	PFAM: NADPH-dependent FMN reductase; KEGG: azo:azo2988 probable chromate reductase
YP_001561071.1	PFAM: conserved hypothetical protein; KEGG: bja:blr3080 hypothetical protein
YP_001561072.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: eli:ELI_06420 glyoxalase family protein
YP_001561073.1	PFAM: NIPSNAP family containing protein; KEGG: rsh:Rsph17029_3880 NIPSNAP family containing protein
YP_001561074.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: swi:Swit_1570 short-chain dehydrogenase/reductase SDR
YP_001561075.1	PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bpe:BP2655 putative IclR-family regulatory protein
YP_001561076.1	PFAM: Glutathione S-transferase domain; KEGG: ajs:Ajs_0023 glutathione S-transferase, C-terminal domain
YP_001561077.1	PFAM: NADPH-dependent FMN reductase; KEGG: aav:Aave_0050 NADPH-dependent FMN reductase
YP_001561078.1	GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs
YP_001561079.1	glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA
YP_001561080.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: ajs:Ajs_0028 lysine exporter protein (LysE/YggA)
YP_001561081.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: ajs:Ajs_0029 cobyrinic acid a,c-diamide synthase
YP_001561082.1	PFAM: protein of unknown function DUF1234; KEGG: aav:Aave_0055 protein of unknown function DUF1234
YP_001561083.1	TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: aav:Aave_0056 ParB-like partition protein
YP_001561084.1	PFAM: Peptidoglycan-binding domain 1 protein; KEGG: aav:Aave_0066 peptidoglycan-binding domain 1 protein
YP_001561085.1	KEGG: ajs:Ajs_0032 methyltransferase type 12
YP_001561086.1	KEGG: ajs:Ajs_0034 cytochrome c, class I
YP_001561087.1	PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: ajs:Ajs_0035 oxidoreductase, molybdopterin binding
YP_001561089.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: ajs:Ajs_0037 RNA polymerase, sigma-24 subunit, ECF subfamily
YP_001561090.1	PFAM: AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: aav:Aave_0082 transcriptional regulator, AraC family
YP_001561091.1	PFAM: major facilitator superfamily MFS_1; KEGG: aav:Aave_0083 major facilitator superfamily MFS_1
YP_001561092.1	catalyzes the release of C-terminal glutamate residues from N-acylating moieties
YP_001561093.1	PFAM: conserved hypothetical protein; KEGG: rme:Rmet_1755 twin-arginine translocation pathway signal
YP_001561094.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rme:Rmet_1756 L-carnitine dehydratase/bile acid-inducible protein F
YP_001561095.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rme:Rmet_1757 transcriptional regulator, LysR family
YP_001561096.1	PFAM: FAD linked oxidase domain protein; KEGG: aav:Aave_0095 FAD linked oxidase domain protein
YP_001561097.1	KEGG: ajs:Ajs_0042 calcium-binding EF-hand-containing protein
YP_001561098.1	TIGRFAM: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: ajs:Ajs_0043 ATP--cobalamin adenosyltransferase
YP_001561099.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_1935 transcriptional regulator, LysR family
YP_001561100.1	KEGG: mag:amb0959 uncharacterized membrane-bound protein
YP_001561101.1	PFAM: FAD dependent oxidoreductase; KEGG: pol:Bpro_1999 D-amino-acid dehydrogenase
YP_001561102.1	PFAM: extracellular solute-binding protein family 3; KEGG: vei:Veis_4737 extracellular solute-binding protein, family 3
YP_001561103.1	TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; KEGG: vei:Veis_4736 aspartate racemase
YP_001561104.1	TIGRFAM: benzoyl-CoA oxygenase/reductase, BoxA protein; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: vei:Veis_0734 oxidoreductase FAD/NAD(P)-binding domain protein
YP_001561105.1	KEGG: pna:Pnap_2943 benzoyl-CoA oxygenase component B
YP_001561106.1	cleaves the ring of 2,3-dihydro-2,3-dihydroxybenzoyl-CoA forming 6-hydroxy-3-hexenoyl-CoA
YP_001561107.1	consists of N-terminal helix-turn-helix domain and C-terminal shikimate kinase-like domain which may bind benzoyl-CoA; controls inducible expression of the bzd catabolic operon that is involved in the anaerobic catabolism of benzoate
YP_001561108.1	TIGRFAM: benzoate-CoA ligase family; PFAM: AMP-dependent synthetase and ligase; KEGG: reh:H16_B1918 benzoate-coenzyme A ligase
YP_001561109.1	PFAM: Extracellular ligand-binding receptor; KEGG: pna:Pnap_2950 extracellular ligand-binding receptor
YP_001561110.1	PFAM: inner-membrane translocator; KEGG: reh:H16_A1415 ABC-type transporter, permease component: HAAT family
YP_001561111.1	PFAM: inner-membrane translocator; KEGG: rfr:Rfer_0212 inner-membrane translocator
YP_001561112.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pna:Pnap_2953 ABC transporter related
YP_001561113.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pna:Pnap_2954 ABC transporter related
YP_001561114.1	PFAM: Domain of unknown function DUF1814; KEGG: xom:XOO_2997 hypothetical protein
YP_001561115.1	KEGG: xom:XOO_2998 hypothetical protein
YP_001561116.1	PFAM: thioesterase superfamily protein; KEGG: ajs:Ajs_0044 uncharacterized domain 1
YP_001561117.1	KEGG: ajs:Ajs_0046 acetyl-CoA hydrolase; TIGRFAM: succinate CoA transferase; PFAM: acetyl-CoA hydrolase/transferase
YP_001561118.1	TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: ajs:Ajs_0048 uracil-xanthine permease
YP_001561119.1	AcsA; in Sinorhizobium meliloti this enzyme is required for acetoacetate activation; similar to acetyl-CoA synthase
YP_001561120.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: ajs:Ajs_0061 acyl-CoA dehydrogenase domain protein
YP_001561121.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: vei:Veis_4039 acyl-CoA dehydrogenase domain protein
YP_001561122.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
YP_001561123.1	TIGRFAM: septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC; KEGG: aav:Aave_0124 septum site-determining protein MinC
YP_001561124.1	TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: aav:Aave_0125 septum site-determining protein MinD
YP_001561125.1	TIGRFAM: cell division topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE; KEGG: ajs:Ajs_0067 cell division topological specificity factor MinE
YP_001561126.1	PFAM: amino acid permease-associated region; KEGG: pfl:PFL_0408 amino acid transporter
YP_001561127.1	PFAM: flavin reductase domain protein FMN-binding; KEGG: vei:Veis_5008 flavin reductase domain protein, FMN-binding
YP_001561128.1	KEGG: ajs:Ajs_4160 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease
YP_001561129.1	TIGRFAM: homoprotocatechuate degradation operon regulator, HpaR; PFAM: regulatory protein MarR; KEGG: bra:BRADO2596 putative homoprotocatechuate degradative operon repressor, transcriptional regulatory protein MarR family, HpcR-like
YP_001561130.1	KEGG: rha:RHA1_ro10138 4-hydroxy-2-oxovalerate aldolase; TIGRFAM: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; PFAM: HpcH/HpaI aldolase
YP_001561131.1	TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: eba:ebA2996 succinate-semialdehyde dehydrogenase
YP_001561132.1	KEGG: bbr:BB0739 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; TIGRFAM: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; PFAM: Hydratase/decarboxylase
YP_001561133.1	PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase; KEGG: bbr:BB0738 5-carboxymethyl-2-hydroxymuconate delta-isomerase
YP_001561134.1	PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: swi:Swit_4311 extradiol ring-cleavage dioxygenase, class III enzyme, subunit B
YP_001561135.1	PFAM: Extradiol ring-cleavage dioxygenase LigAB LigA subunit; KEGG: swi:Swit_4310 hypothetical protein
YP_001561136.1	PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0143 uncharacterized protein UPF0065
YP_001561137.1	TIGRFAM: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: bbr:BB0736 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase
YP_001561138.1	KEGG: bcy:Bcer98_0972 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, HpaG2 subunit; TIGRFAM: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase,HpaG2 subunit; PFAM: fumarylacetoacetate (FAA) hydrolase
YP_001561139.1	KEGG: bte:BTH_II1735 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit; TIGRFAM: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, HpaG1 subunit; PFAM: fumarylacetoacetate (FAA) hydrolase
YP_001561140.1	PFAM: Fibronectin type III domain protein; KEGG: ava:Ava_4728 endonuclease/exonuclease/phosphatase
YP_001561141.1	PFAM: UspA domain protein; KEGG: ajs:Ajs_0074 UspA domain protein
YP_001561142.1	PFAM: metallophosphoesterase; KEGG: aav:Aave_0135 metallophosphoesterase
YP_001561143.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pol:Bpro_0158 transcriptional regulator, LysR family
YP_001561144.1	KEGG: ajs:Ajs_0077 hypothetical protein
YP_001561145.1	catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP
YP_001561146.1	KEGG: rfr:Rfer_0345 hypothetical protein
YP_001561147.1	catalyzes the formation of 2-oxobutanoate from L-threonine
YP_001561148.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bam:Bamb_1692 transcriptional regulator, AraC family
YP_001561149.1	PFAM: Siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: oan:Oant_1901 siderophore-interacting protein
YP_001561150.1	PFAM: AMP-dependent synthetase and ligase; KEGG: bur:Bcep18194_A3296 AMP-dependent synthetase and ligase
YP_001561151.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_0081 acyl-CoA dehydrogenase domain protein
YP_001561152.1	PFAM: regulatory protein TetR; KEGG: bam:Bamb_0108 transcriptional regulator, TetR family
YP_001561153.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: aav:Aave_4320 histidine kinase
YP_001561154.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: aav:Aave_4321 two component transcriptional regulator, winged helix family
YP_001561155.1	PFAM: Fimbrial protein; KEGG: kpn:KPN_03276 putative fimbrial-like protein
YP_001561156.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: aav:Aave_4322 transcriptional regulator, fis family
YP_001561157.1	PFAM: protein of unknown function DUF214; KEGG: aav:Aave_4323 protein of unknown function DUF214
YP_001561158.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_4324 ABC transporter-related protein
YP_001561159.1	PFAM: secretion protein HlyD family protein; KEGG: aav:Aave_4325 secretion protein HlyD family protein
YP_001561160.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; PFAM: HAD-superfamily hydrolase subfamily IB hypothetical 1; KEGG: aav:Aave_4326 2,3-diketo-5-methylthio-1-phosphopentane phosphatase
YP_001561161.1	PFAM: alpha/beta hydrolase fold; KEGG: aav:Aave_4327 alpha/beta hydrolase fold
YP_001561162.1	KEGG: aav:Aave_4328 hypothetical protein
YP_001561163.1	KEGG: aav:Aave_4329 hypothetical protein
YP_001561164.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: aav:Aave_4330 DegT/DnrJ/EryC1/StrS aminotransferase
YP_001561165.1	PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mes:Meso_3871 cyclopropane-fatty-acyl-phospholipid synthase
YP_001561166.1	KEGG: aav:Aave_4331 hypothetical protein
YP_001561167.1	KEGG: aav:Aave_4332 hypothetical protein
YP_001561168.1	PFAM: aminotransferase class-III; KEGG: aav:Aave_4333 aminotransferase class-III
YP_001561169.1	TIGRFAM: TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: kpn:KPN_03087 outer membrane porin, receptor for ferric enterobactin and colicins B and D
YP_001561170.1	KEGG: ccr:CC_2193 hypothetical protein
YP_001561171.1	KEGG: xcb:XC_1336 hypothetical protein
YP_001561172.1	KEGG: aav:Aave_0181 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases
YP_001561173.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: reh:H16_B0975 acyl-CoA dehydrogenase
YP_001561174.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: reh:H16_B0974 predicted acyl-CoA transferase/carnitine dehydratase
YP_001561175.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_A0487 transcriptional regulator, LysR-family
YP_001561176.1	KEGG: aav:Aave_2969 substrate-binding region of ABC-type glycine betaine transport system
YP_001561177.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_1046 binding-protein-dependent transport systems inner membrane component
YP_001561178.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pol:Bpro_1045 ABC transporter related
YP_001561179.1	TIGRFAM: histidine utilization repressor; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: aav:Aave_2966 transcriptional regulator, histidine utilization repressor, GntR family
YP_001561180.1	catalyzes the degradation of histidine to urocanate and ammmonia
YP_001561181.1	catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism
YP_001561182.1	PFAM: protein of unknown function DUF886; KEGG: aav:Aave_2962 protein of unknown function DUF886
YP_001561183.1	catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway
YP_001561184.1	PFAM: FAD linked oxidase domain protein; KEGG: bxe:Bxe_B1817 putative oxidoreductase
YP_001561185.1	catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate and L-glutamate from L-histidinol phosphate and 2-oxoglutarate
YP_001561186.1	catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate
YP_001561187.1	PFAM: N-formylglutamate amidohydrolase; KEGG: aav:Aave_2959 N-formylglutamate amidohydrolase
YP_001561188.1	TIGRFAM: redox-sensitive transcriptional activator SoxR; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: bte:BTH_II1612 redox-sensitive transcriptional activator SoxR
YP_001561189.1	KEGG: pap:PSPA7_4422 hypothetical protein
YP_001561190.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pap:PSPA7_4421 putative HTH-type transcriptional regulator YeaM
YP_001561191.1	PFAM: RNA-directed DNA polymerase (Reverse transcriptase); KEGG: hch:HCH_03958 retron-type reverse transcriptase
YP_001561192.1	PFAM: zinc finger SWIM domain protein; KEGG: hch:HCH_03960 protein containing SWIM zinc finger domain
YP_001561193.1	KEGG: hch:HCH_03961 probable DNA binding protein containing WGR domain
YP_001561194.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bch:Bcen2424_4746 efflux transporter, RND family, MFP subunit
YP_001561195.1	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: bch:Bcen2424_4745 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family
YP_001561196.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bch:Bcen2424_4744 RND efflux system, outer membrane lipoprotein, NodT family
YP_001561197.1	PFAM: FAD dependent oxidoreductase; KEGG: pfl:PFL_0805 FAD dependent oxidoreductase
YP_001561198.1	KEGG: pfl:PFL_0803 hypothetical protein
YP_001561199.1	PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: pol:Bpro_1469 transcriptional regulator, XRE family
YP_001561200.1	PFAM: homocysteine S-methyltransferase; KEGG: aav:Aave_0174 methionine synthase
YP_001561201.1	KEGG: aav:Aave_0187 putative Fe-S oxidoreductase
YP_001561202.1	PFAM: porin Gram-negative type; KEGG: ajs:Ajs_0134 porin, gram-negative type
YP_001561203.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mms:mma_0161 methyl-accepting chemotaxis transducer transmembrane protein
YP_001561204.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: ajs:Ajs_0133 L-carnitine dehydratase/bile acid-inducible protein F
YP_001561205.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_0132 transcriptional regulator, LysR family
YP_001561206.1	PFAM: thioesterase superfamily protein; KEGG: ajs:Ajs_0131 uncharacterized domain 1
YP_001561207.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_0130 acyl-CoA dehydrogenase domain protein
YP_001561208.1	KEGG: ajs:Ajs_0129 thiolase
YP_001561209.1	PFAM: protein of unknown function DUF35; KEGG: ajs:Ajs_0128 protein of unknown function DUF35
YP_001561210.1	PFAM: Acetamidase/Formamidase; KEGG: pol:Bpro_0569 formamidase
YP_001561211.1	TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: pol:Bpro_0570 regulatory protein, putative
YP_001561212.1	PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0127 uncharacterized protein UPF0065
YP_001561213.1	PFAM: Extracellular ligand-binding receptor; KEGG: rme:Rmet_1640 putative UreA/short-chain amide ABC transporter
YP_001561214.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sme:SMc03929 putative zinc-type alcohol dehydrogenase transmembrane protein
YP_001561215.1	PFAM: Amidase; KEGG: rrs:RoseRS_3083 amidase
YP_001561216.1	PFAM: conserved hypothetical protein; KEGG: reu:Reut_B3884 hypothetical protein
YP_001561217.1	PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_0126 AMP-dependent synthetase and ligase
YP_001561218.1	PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0125 uncharacterized protein UPF0065
YP_001561219.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rme:Rmet_4850 transcriptional regulator, LysR family
YP_001561220.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: reh:H16_B2003 predicted acyl-CoA transferase/carnitine dehydratase
YP_001561221.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: reh:H16_B2004 NADPH:quinone reductase or related Zn-dependent oxidoreductase
YP_001561222.1	PFAM: conserved hypothetical protein; KEGG: reh:H16_B2005 probable extra-cytoplasmic solute receptor
YP_001561223.1	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation
YP_001561224.1	KEGG: ajs:Ajs_0123 acetyl-CoA hydrolase/transferase
YP_001561225.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ajs:Ajs_0122 enoyl-CoA hydratase/isomerase
YP_001561226.1	PFAM: MaoC domain protein dehydratase; KEGG: ajs:Ajs_0121 MaoC domain protein dehydratase
YP_001561227.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ajs:Ajs_0120 short-chain dehydrogenase/reductase SDR
YP_001561228.1	KEGG: ajs:Ajs_0119 hypothetical protein
YP_001561229.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: reh:H16_B1367 acyl-CoA dehydrogenase
YP_001561230.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: ajs:Ajs_0117 L-carnitine dehydratase/bile acid-inducible protein F
YP_001561231.1	PFAM: MmgE/PrpD family protein; KEGG: ajs:Ajs_0116 MmgE/PrpD family protein
YP_001561232.1	PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0115 uncharacterized protein UPF0065
YP_001561233.1	PFAM: HpcH/HpaI aldolase; KEGG: ajs:Ajs_0114 HpcH/HpaI aldolase
YP_001561234.1	PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0101 uncharacterized protein UPF0065
YP_001561236.1	KEGG: aav:Aave_1934 hypothetical protein
YP_001561237.1	KEGG: stm:STM0283 putative inner membrane protein
YP_001561238.1	PFAM: thioesterase superfamily protein; KEGG: ajs:Ajs_0100 uncharacterized domain 1
YP_001561239.1	PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0099 uncharacterized protein UPF0065
YP_001561240.1	PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_0098 AMP-dependent synthetase and ligase
YP_001561241.1	PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0097 uncharacterized protein UPF0065
YP_001561242.1	PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: aav:Aave_0188 Glu/Leu/Phe/Val dehydrogenase, C terminal
YP_001561243.1	KEGG: reh:H16_B1174 hypothetical protein
YP_001561244.1	PFAM: protein of unknown function DUF344; KEGG: aav:Aave_0190 protein of unknown function DUF344
YP_001561246.1	KEGG: rso:RS01899 probable hemagglutinin-related transmembrane protein
YP_001561247.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_0137 transcriptional regulator, LysR family
YP_001561248.1	PFAM: transmembrane pair domain protein; KEGG: ajs:Ajs_0138 transmembrane pair domain protein
YP_001561249.1	PFAM: regulatory protein LuxR; response regulator receiver; KEGG: pol:Bpro_0562 two component transcriptional regulator, LuxR family
YP_001561250.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pol:Bpro_0563 periplasmic sensor hybrid histidine kinase
YP_001561251.1	TIGRFAM: urea ABC transporter, urea binding protein; KEGG: mpt:Mpe_A3587 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein
YP_001561252.1	TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; KEGG: mpt:Mpe_A3588 branched-chain amino acid ABC transporter, permease protein
YP_001561253.1	TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; KEGG: mpt:Mpe_A3589 branched-chain amino acid ABC transporter, permease protein
YP_001561254.1	TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related; KEGG: mpt:Mpe_A3590 branched-chain amino acid ABC transporter, ATP-binding protein
YP_001561255.1	KEGG: mpt:Mpe_A3591 ABC transporter ATP-binding protein; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001561256.1	PFAM: Acetamidase/Formamidase; KEGG: bxe:Bxe_B1706 formamidase (FmdA)
YP_001561257.1	TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: mpt:Mpe_A3593 regulatory protein, putative
YP_001561258.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rso:RSc2106 probable amino-acid ATP-binding ABC transporter protein
YP_001561259.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_0209 polar amino acid ABC transporter, inner membrane subunit
YP_001561260.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc2104 probable amino-acid transmembrane ABC transporter protein
YP_001561261.1	PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: aav:Aave_0211 extracellular solute-binding protein, family 3
YP_001561262.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: rso:RSc2102 probable transcription regulator protein
YP_001561263.1	KEGG: aav:Aave_0214 methionine synthase; TIGRFAM: methionine synthase; PFAM: dihydropteroate synthase DHPS; Methionine synthase B12-binding module cap domain protein; Vitamin B12 dependent methionine synthase activation region; cobalamin B12-binding domain protein
YP_001561264.1	KEGG: bov:BOV_A0145 hypothetical protein
YP_001561265.1	KEGG: bpa:BPP0722 hypothetical protein
YP_001561266.1	PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: pol:Bpro_3128 glycerophosphoryl diester phosphodiesterase
YP_001561267.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: aav:Aave_1099 transcriptional regulator, GntR family
YP_001561268.1	involved in the transport of C4-dicarboxylates across the membrane
YP_001561269.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bja:blr0239 probable citrate-proton symporter
YP_001561270.1	catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine
YP_001561271.1	TIGRFAM: alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein; KEGG: rfr:Rfer_3747 alkylphosphonate utilization operon protein PhnA
YP_001561273.1	PFAM: pseudouridine synthase; KEGG: ajs:Ajs_2497 pseudouridine synthase
YP_001561274.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bpd:BURPS668_0024 transcriptional regulator, LysR family
YP_001561275.1	PFAM: LrgA family protein; KEGG: cvi:CV_1151 probable murein hydrolase exporter
YP_001561276.1	PFAM: LrgB family protein; KEGG: spe:Spro_4427 LrgB family protein
YP_001561277.1	KEGG: rso:RSc1866 hypothetical protein
YP_001561278.1	PFAM: Aldehyde Dehydrogenase_; KEGG: ajs:Ajs_1126 aldehyde dehydrogenase
YP_001561279.1	PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: ajs:Ajs_1990 glucarate dehydratase
YP_001561280.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: ajs:Ajs_1991 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
YP_001561281.1	PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_1992 uncharacterized protein UPF0065
YP_001561282.1	catalyzes the formation of 2,5-dioxopentanoate from 5-dehydro-4-deoxy-D-glucarate
YP_001561283.1	PFAM: conserved hypothetical protein; KEGG: aav:Aave_2588 uncharacterized protein UPF0065
YP_001561284.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: ajs:Ajs_1995 GntR domain protein
YP_001561285.1	PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: ajs:Ajs_1996 mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein
YP_001561286.1	PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_1997 uncharacterized protein UPF0065
YP_001561287.1	KEGG: ajs:Ajs_1998 galactarate dehydratase; TIGRFAM: galactarate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein
YP_001561288.1	PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: ajs:Ajs_1999 gluconolactonase
YP_001561289.1	PFAM: ribonuclease BN; KEGG: aav:Aave_0221 ribonuclease BN
YP_001561290.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_3911 transcriptional regulator, LysR family
YP_001561291.1	PFAM: inner-membrane translocator; KEGG: reh:H16_B2037 ABC-type transporter, permease component: HAAT family
YP_001561292.1	PFAM: inner-membrane translocator; KEGG: reh:H16_B2038 ABC-type transporter, permease component: HAAT family
YP_001561293.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: reu:Reut_B3658 ABC transporter related
YP_001561294.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: reh:H16_B2040 ABC-type transporter, ATPase component: HAAT family
YP_001561295.1	PFAM: Extracellular ligand-binding receptor; KEGG: rme:Rmet_3976 extracellular ligand-binding receptor
YP_001561296.1	KEGG: xft:PD0997 hypothetical protein
YP_001561297.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rso:RSc1763 gluconate 5-dehydrogenase
YP_001561298.1	PFAM: regulatory protein IclR; KEGG: reh:H16_A2948 transcriptional regulator, IclR-family
YP_001561299.1	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: ajs:Ajs_0153 ferredoxin--NADP(+) reductase
YP_001561300.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_0158 transcriptional regulator, LysR family
YP_001561301.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ajs:Ajs_0159 short-chain dehydrogenase/reductase SDR
YP_001561302.1	KEGG: pfo:Pfl_0928 hypothetical protein
YP_001561303.1	PFAM: PepSY-associated TM helix domain protein; KEGG: rpb:RPB_3524 PepSY-associated TM helix
YP_001561304.1	KEGG: rpc:RPC_2857 hypothetical protein
YP_001561305.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: vei:Veis_4138 transcriptional regulator, LysR family
YP_001561306.1	KEGG: vei:Veis_4137 hypothetical protein
YP_001561307.1	PFAM: Rhodanese domain protein; KEGG: vei:Veis_4136 rhodanese domain protein
YP_001561308.1	PFAM: conserved hypothetical protein; KEGG: vei:Veis_4135 uncharacterized protein UPF0065
YP_001561309.1	TIGRFAM: cystathionine beta-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: vei:Veis_4134 cystathionine beta-lyase
YP_001561310.1	PFAM: 2-nitropropane dioxygenase NPD; KEGG: reu:Reut_B5128 2-nitropropane dioxygenase, NPD
YP_001561311.1	PFAM: protein of unknown function DUF1228; major facilitator superfamily MFS_1; KEGG: mms:mma_1602 transporter of the MFS superfamily
YP_001561312.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mms:mma_1603 transcriptional regulator, LysR family
YP_001561313.1	TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein; KEGG: bam:Bamb_4540 HipA domain protein
YP_001561314.1	PFAM: helix-turn-helix domain protein; KEGG: bam:Bamb_4541 transcriptional regulator, XRE family
YP_001561315.1	KEGG: vei:Veis_3316 Mg chelatase, subunit ChlI; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_001561316.1	KEGG: ppf:Pput_3076 hypothetical protein
YP_001561317.1	KEGG: ppf:Pput_3075 hypothetical protein
YP_001561318.1	TIGRFAM: hydroxymethylglutaryl-CoA reductase, degradative; KEGG: bch:Bcen2424_3505 hydroxymethylglutaryl-CoA reductase, degradative
YP_001561319.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bch:Bcen2424_3504 transcriptional regulator, GntR family
YP_001561320.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B1032 transcriptional regulator, LysR family
YP_001561321.1	PFAM: major facilitator superfamily MFS_1; KEGG: pol:Bpro_1492 major facilitator superfamily MFS_1
YP_001561322.1	PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: pol:Bpro_1493 mandelate racemase/muconate lactonizing enzyme
YP_001561323.1	PFAM: HpcH/HpaI aldolase; KEGG: csa:Csal_2517 2-dehydro-3-deoxyglucarate aldolase
YP_001561324.1	PFAM: Aldehyde Dehydrogenase_; KEGG: mpt:Mpe_A0361 lactaldehyde dehydrogenase
YP_001561325.1	PFAM: regulatory protein MarR; KEGG: aav:Aave_4468 transcriptional regulator, TrmB
YP_001561326.1	PFAM: conserved hypothetical protein; KEGG: reh:H16_B0482 probable extra-cytoplasmic solute receptor
YP_001561327.1	PFAM: sulfatase; KEGG: aav:Aave_4466 sulfatase
YP_001561328.1	KEGG: sse:Ssed_0851 hypothetical protein
YP_001561329.1	KEGG: rso:RS06029 hypothetical protein
YP_001561330.1	TIGRFAM: YD repeat protein; PFAM: RHS protein; YD repeat-containing protein; KEGG: aav:Aave_4283 YD repeat protein
YP_001561331.1	TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; Gp5 domain protein; KEGG: aav:Aave_2735 rhs element Vgr protein
YP_001561332.1	PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0162 hypothetical protein
YP_001561333.1	PFAM: nitrogen regulatory protein P-II; KEGG: pna:Pnap_0120 nitrogen regulatory protein P-II
YP_001561334.1	TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: ajs:Ajs_0164 ammonium transporter
YP_001561335.1	PFAM: FAD linked oxidase domain protein; KEGG: vei:Veis_3312 FAD linked oxidase domain protein
YP_001561336.1	PFAM: protein of unknown function DUF1275; KEGG: ajs:Ajs_0167 protein of unknown function DUF1275
YP_001561337.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: ajs:Ajs_0168 protein of unknown function DUF224, cysteine-rich region domain protein
YP_001561338.1	PFAM: ProQ activator of osmoprotectant transporter ProP; KEGG: ajs:Ajs_0169 ProQ activator of osmoprotectant transporter ProP
YP_001561339.1	PFAM: AmiS/UreI transporter; KEGG: har:HEAR1450 putative transporter protein AmiS
YP_001561340.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: ajs:Ajs_0174 protein of unknown function DUF6, transmembrane
YP_001561341.1	PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_0175 major facilitator superfamily MFS_1
YP_001561342.1	KEGG: ajs:Ajs_0176 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein
YP_001561343.1	PFAM: regulatory protein MarR; KEGG: sit:TM1040_1546 transcriptional regulator, MarR family
YP_001561344.1	PFAM: Siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: reh:H16_B1184 siderophore-interacting protein
YP_001561345.1	Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents
YP_001561346.1	KEGG: aav:Aave_0263 hypothetical protein
YP_001561347.1	catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids
YP_001561348.1	KEGG: aav:Aave_0265 hypothetical protein
YP_001561349.1	KEGG: aav:Aave_0266 hypothetical protein
YP_001561350.1	PFAM: O-antigen polymerase; KEGG: aav:Aave_0267 O-antigen polymerase
YP_001561351.1	PFAM: glycosyl transferase group 1; KEGG: ajs:Ajs_0185 glycosyl transferase, group 1
YP_001561352.1	PFAM: glycosyl transferase family 2; KEGG: ajs:Ajs_0186 glycosyl transferase, family 2
YP_001561353.1	KEGG: aav:Aave_0270 mannosyltransferase OCH1-related enzyme
YP_001561354.1	KEGG: pen:PSEEN3249 hypothetical protein
YP_001561355.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN3248 transporter, MFS family
YP_001561356.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN3247 transcriptional regulator, LysR family
YP_001561358.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ajs:Ajs_0193 integral membrane sensor signal transduction histidine kinase
YP_001561359.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ajs:Ajs_0194 two component transcriptional regulator, winged helix family
YP_001561360.1	PFAM: major facilitator superfamily MFS_1; KEGG: aav:Aave_0276 major facilitator superfamily MFS_1
YP_001561361.1	SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ajs:Ajs_0200 cupin 2, conserved barrel domain protein
YP_001561362.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: ajs:Ajs_0201 protein of unknown function DUF6, transmembrane
YP_001561363.1	PFAM: peptidase M48 Ste24p; KEGG: aav:Aave_0280 peptidase M48, Ste24p
YP_001561364.1	PFAM: Aldehyde Dehydrogenase_; KEGG: pla:Plav_1859 aldehyde dehydrogenase
YP_001561365.1	PFAM: beta-lactamase domain protein; KEGG: aav:Aave_0282 beta-lactamase domain protein
YP_001561366.1	KEGG: sfr:Sfri_3475 hypothetical protein
YP_001561367.1	PFAM: alanine dehydrogenase/PNT domain protein; KEGG: ajs:Ajs_3954 NAD(P)(+) transhydrogenase (AB-specific)
YP_001561368.1	KEGG: ajs:Ajs_3952 NAD(P) transhydrogenase, subunit alpha part 2
YP_001561369.1	PFAM: NAD(P) transhydrogenase beta subunit; KEGG: mpt:Mpe_A3571 NAD(P) transhydrogenase, beta subunit
YP_001561370.1	KEGG: aav:Aave_0288 exodeoxyribonuclease III Xth; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase
YP_001561371.1	involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate
YP_001561372.1	KEGG: aav:Aave_0290 hypothetical protein
YP_001561373.1	TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; PFAM: Pyrrolo-quinoline quinone; KEGG: aav:Aave_0411 pyrrolo-quinoline quinone
YP_001561376.1	PFAM: nitroreductase; KEGG: psb:Psyr_1566 nitroreductase
YP_001561378.1	PFAM: amino acid-binding ACT domain protein; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: aav:Aave_3649 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
YP_001561379.1	PFAM: CBS domain containing protein; HPP family protein?; KEGG: rsh:Rsph17029_2488 CBS domain containing protein
YP_001561380.1	PFAM: beta-lactamase; KEGG: rpb:RPB_2265 beta-lactamase
YP_001561381.1	PFAM: conserved hypothetical protein; KEGG: aav:Aave_2466 uncharacterized protein UPF0065
YP_001561382.1	TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB/Yqey domain protein; GatB region; GatB central domain protein; KEGG: ajs:Ajs_0236 glutamyl-tRNA(Gln) amidotransferase, B subunit
YP_001561383.1	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA
YP_001561384.1	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain
YP_001561385.1	functions in MreBCD complex in some organisms
YP_001561386.1	TIGRFAM: rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; KEGG: aav:Aave_0295 rod shape-determining protein MreC
YP_001561387.1	TIGRFAM: rod shape-determining protein MreD; PFAM: Rod shape-determining protein MreD; KEGG: vei:Veis_1608 putative rod shape-determining MreD transmembrane protein
YP_001561388.1	KEGG: ajs:Ajs_0242 peptidoglycan glycosyltransferase; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain
YP_001561389.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_0244 ABC transporter related
YP_001561390.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_0245 polar amino acid ABC transporter, inner membrane subunit
YP_001561391.1	PFAM: extracellular solute-binding protein family 3; KEGG: aav:Aave_0301 extracellular solute-binding protein, family 3
YP_001561392.1	PFAM: protein of unknown function DUF81; KEGG: ajs:Ajs_0248 protein of unknown function DUF81
YP_001561393.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: reh:H16_B0517 Zn-dependent alcohol dehydrogenase
YP_001561394.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_B0516 transcriptional regulator, LysR-family
YP_001561395.1	PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: aav:Aave_0305 glucose-methanol-choline oxidoreductase
YP_001561396.1	PFAM: protein of unknown function DUF140; KEGG: vei:Veis_0920 protein of unknown function DUF140
YP_001561397.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_0307 ABC transporter-related protein
YP_001561398.1	PFAM: Mammalian cell entry related domain protein; KEGG: vei:Veis_0922 mammalian cell entry related domain protein
YP_001561399.1	KEGG: ajs:Ajs_0253 putative lipoprotein
YP_001561400.1	PFAM: CsbD family protein; KEGG: aav:Aave_0312 CsbD family protein
YP_001561401.1	KEGG: ajs:Ajs_0255 hypothetical protein
YP_001561402.1	TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: pna:Pnap_1243 hemerythrin-like metal-binding protein
YP_001561403.1	PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: aav:Aave_0319 multiple antibiotic resistance (MarC)-related protein
YP_001561404.1	PFAM: dienelactone hydrolase; KEGG: ajs:Ajs_0260 carboxymethylenebutenolidase
YP_001561406.1	KEGG: pol:Bpro_1655 hypothetical protein
YP_001561407.1	KEGG: nha:Nham_3087 outer membrane autotransporter barrel
YP_001561408.1	PFAM: regulatory protein LuxR; response regulator receiver; Bacterio-opsin activator HTH domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: pna:Pnap_4084 two component transcriptional regulator, LuxR family
YP_001561409.1	PFAM: ATP-binding region ATPase domain protein; KEGG: pna:Pnap_4085 integral membrane sensor signal transduction histidine kinase
YP_001561410.1	PFAM: Mg2 transporter protein CorA family protein; KEGG: aav:Aave_0326 Mg2+ transporter protein, CorA family protein
YP_001561411.1	catalyzes the formation of porphobilinogen from 5-aminolevulinate
YP_001561412.1	PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0268 conserved hypothetical protein 701
YP_001561413.1	PFAM: VanZ family protein; KEGG: ajs:Ajs_0269 VanZ family protein
YP_001561414.1	KEGG: ajs:Ajs_0270 ferredoxin-like protein
YP_001561415.1	KEGG: ajs:Ajs_0271 putative transmembrane protein
YP_001561416.1	PFAM: beta-lactamase; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: aav:Aave_0332 serine-type D-Ala-D-Ala carboxypeptidase
YP_001561417.1	interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance
YP_001561418.1	binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit
YP_001561419.1	EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene
YP_001561420.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu
YP_001561421.1	NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex
YP_001561422.1	binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin
YP_001561423.1	L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA
YP_001561424.1	binds third domain of 23S rRNA and protein L29; part of exit tunnel
YP_001561425.1	one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation
YP_001561426.1	protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
YP_001561427.1	binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center
YP_001561428.1	forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation
YP_001561429.1	located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e
YP_001561430.1	one of the stabilizing components for the large ribosomal subunit
YP_001561431.1	primary binding protein; helps mediate assembly; involved in translation fidelity
YP_001561432.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: ajs:Ajs_0288 redoxin domain protein
YP_001561433.1	PFAM: GCN5-related N-acetyltransferase; KEGG: aav:Aave_0349 GCN5-related N-acetyltransferase
YP_001561434.1	PFAM: cytochrome B561; KEGG: ajs:Ajs_0290 cytochrome b561
YP_001561435.1	PFAM: cytochrome c prime; KEGG: ajs:Ajs_0291 cytochrome c, class II
YP_001561436.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: aav:Aave_0350 redoxin domain protein
YP_001561437.1	KEGG: ajs:Ajs_0293 hypothetical protein
YP_001561438.1	PFAM: PTS system fructose subfamily IIA component; KEGG: ajs:Ajs_0295 PTS system fructose subfamily IIA component
YP_001561439.1	TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: aav:Aave_0353 phosphotransferase system, phosphocarrier protein HPr
YP_001561440.1	TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: aav:Aave_0354 phosphoenolpyruvate-protein phosphotransferase
YP_001561441.1	catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group
YP_001561442.1	lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein
YP_001561443.1	PFAM: protein of unknown function DUF493; KEGG: aav:Aave_0364 protein of unknown function DUF493
YP_001561444.1	KEGG: ajs:Ajs_0301 putative ATP synthase protein I
YP_001561445.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0
YP_001561446.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0
YP_001561447.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.
YP_001561448.1	Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex
YP_001561449.1	produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit
YP_001561450.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit
YP_001561451.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit
YP_001561452.1	part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane
YP_001561454.1	PFAM: protein of unknown function DUF477; KEGG: aav:Aave_0379 protein of unknown function DUF477
YP_001561455.1	PFAM: protein of unknown function DUF477; KEGG: ajs:Ajs_0315 protein of unknown function DUF477
YP_001561456.1	PFAM: LemA family protein; KEGG: aav:Aave_0381 LemA family protein
YP_001561457.1	KEGG: aav:Aave_0383 alpha/beta hydrolase fold
YP_001561458.1	KEGG: pna:Pnap_0262 hypothetical protein
YP_001561459.1	KEGG: rme:Rmet_1560 hypothetical protein
YP_001561460.1	PFAM: conjugation TrbI family protein; KEGG: rme:Rmet_1559 conjugation TrbI-like protein
YP_001561461.1	TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: pau:PA14_30860 TrbG-like protein
YP_001561462.1	PFAM: Conjugal transfer protein; KEGG: ajs:Ajs_2904 conjugal transfer protein
YP_001561463.1	type IV secretion VirB6 family
YP_001561464.1	KEGG: ajs:Ajs_2906 putative lipoprotein
YP_001561465.1	TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: pau:PA14_30900 TrbJ-like protein
YP_001561466.1	type IV secretion system VirB4 family
YP_001561467.1	KEGG: rme:Rmet_1552 putative conjugal transfer TrbD transmembrane protein
YP_001561468.1	PFAM: Conjugal transfer protein TrbC; KEGG: rme:Rmet_1551 conjugal transfer protein TrbC
YP_001561469.1	TIGRFAM: P-type conjugative transfer ATPase TrbB; PFAM: type II secretion system protein E; KEGG: rme:Rmet_1550 type II secretion system protein E
YP_001561470.1	PFAM: CopG domain protein DNA-binding domain protein; KEGG: pau:PA14_30950 hypothetical protein
YP_001561471.1	type IV secretion VirD4 coupling protein family
YP_001561472.1	KEGG: bte:BTH_I0809 hypothetical protein
YP_001561473.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: shn:Shewana3_1278 transcriptional regulator, LysR family
YP_001561474.1	KEGG: ajs:Ajs_2717 hypothetical protein
YP_001561475.1	PFAM: copper resistance D domain protein; KEGG: rso:RSp0659 probable copper resistance D transmembrane protein
YP_001561476.1	PFAM: copper resistance protein CopC; KEGG: rme:Rmet_6114 copper resistance protein CopC
YP_001561477.1	KEGG: neu:NE1216 haloacid dehalogenase/epoxide hydrolase family:E1-E2 ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; YHS domain protein; E1-E2 ATPase-associated domain protein; SMART: TRASH domain protein
YP_001561478.1	KEGG: pna:Pnap_4518 hypothetical protein
YP_001561479.1	PFAM: protein of unknown function DUF411; KEGG: pna:Pnap_1259 protein of unknown function DUF411
YP_001561480.1	PFAM: copper resistance B precursor; KEGG: ajs:Ajs_1234 copper resistance B precursor
YP_001561481.1	TIGRFAM: copper-resistance protein, CopA family; PFAM: multicopper oxidase type 1; multicopper oxidase type 2; multicopper oxidase type 3; KEGG: ajs:Ajs_1235 copper-resistance protein, CopA family
YP_001561482.1	TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ajs:Ajs_1236 two component heavy metal response transcriptional regulator, winged helix family
YP_001561483.1	TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: har:HEAR0537 sensory histidine kinase in two-component regulatory system with CusR, regulation of copper resistance, senses copper ions
YP_001561484.1	KEGG: rme:Rmet_1489 hypothetical protein
YP_001561485.1	KEGG: rme:Rmet_1258 putative conjugal transfer TRAF transmembrane protein
YP_001561486.1	KEGG: rme:Rmet_1487 hypothetical protein
YP_001561487.1	KEGG: aav:Aave_0688 hypothetical protein
YP_001561488.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: rme:Rmet_3023 cobyrinic acid a,c-diamide synthase
YP_001561489.1	KEGG: ajs:Ajs_2933 conserved hypothetical replication initiator and transcription repressor protein
YP_001561490.1	KEGG: ajs:Ajs_2651 hypothetical protein
YP_001561491.1	KEGG: rme:Rmet_1482 putative lipoprotein
YP_001561492.1	PFAM: helix-turn-helix domain protein; KEGG: rme:Rmet_1481 transcriptional regulator, XRE family
YP_001561493.1	PFAM: protein of unknown function DUF736; KEGG: pau:PA14_31180 hypothetical protein
YP_001561494.1	PFAM: protein of unknown function DUF1232; KEGG: bbr:BB1021 hypothetical protein
YP_001561495.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: pde:Pden_3353 cation diffusion facilitator family transporter
YP_001561496.1	PFAM: protein of unknown function DUF156; KEGG: pde:Pden_3352 protein of unknown function DUF156
YP_001561497.1	KEGG: rme:Rmet_3032 hypothetical protein
YP_001561498.1	PFAM: ParB domain protein nuclease; KEGG: rme:Rmet_3033 ParB-like nuclease
YP_001561499.1	PFAM: protein of unknown function DUF932; KEGG: ajs:Ajs_2944 protein of unknown function DUF932
YP_001561500.1	KEGG: pau:PA14_31220 hypothetical protein
YP_001561501.1	KEGG: rme:Rmet_3038 hypothetical protein
YP_001561502.1	KEGG: pol:Bpro_3490 hypothetical protein
YP_001561504.1	TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: pol:Bpro_3491 heavy metal efflux pump CzcA
YP_001561505.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pol:Bpro_3492 secretion protein HlyD
YP_001561506.1	KEGG: mpt:Mpe_A1625 putative outer membrane cation efflux protein
YP_001561507.1	KEGG: rme:Rmet_5030 hypothetical protein
YP_001561508.1	PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: azo:azo1354 putative regulatory protein
YP_001561509.1	TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: vei:Veis_2831 putative transcriptional regulator, MerR family
YP_001561510.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: pla:Plav_3390 heavy metal translocating P-type ATPase
YP_001561511.1	TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II; KEGG: pla:Plav_3391 lipoprotein signal peptidase
YP_001561512.1	KEGG: cvi:CV_1327 undecaprenyl-diphosphatase; TIGRFAM: undecaprenol kinase; PFAM: Bacitracin resistance protein BacA
YP_001561513.1	PFAM: cytochrome c class I; iron permease FTR1; KEGG: ajs:Ajs_1240 iron permease FTR1
YP_001561514.1	TIGRFAM: mercuric reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; Heavy metal transport/detoxification protein; KEGG: ajs:Ajs_1298 mercuric reductase
YP_001561515.1	TIGRFAM: mercuric transport protein periplasmic component; PFAM: Heavy metal transport/detoxification protein; KEGG: ajs:Ajs_1299 mercuric transport protein periplasmic component
YP_001561516.1	PFAM: Mercuric transport protein MerT; KEGG: ajs:Ajs_1300 mercuric transport protein MerT
YP_001561517.1	TIGRFAM: Hg(II)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: ajs:Ajs_1301 putative transcriptional regulator, MerR family
YP_001561518.1	SMART: regulatory protein ArsR; KEGG: mpt:Mpe_A2347 TC repressor
YP_001561519.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mpt:Mpe_A2346 hypothetical protein
YP_001561520.1	PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: mpt:Mpe_A2345 arsenate reductase, putative
YP_001561521.1	TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: har:HEAR1962 arsenite efflux pump ACR3
YP_001561522.1	TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: har:HEAR1960 arsenate reductase (glutaredoxin)
YP_001561523.1	TIGRFAM: arsenical resistance protein ArsH; PFAM: NADPH-dependent FMN reductase; KEGG: ajs:Ajs_1284 NADPH-dependent FMN reductase
YP_001561525.1	KEGG: ajs:Ajs_2957 putative transcriptional regulator
YP_001561526.1	KEGG: rme:Rmet_1467 prophage CP4-57 regulatory
YP_001561527.1	KEGG: rme:Rmet_1466 hypothetical protein
YP_001561528.1	PFAM: integrase family protein; KEGG: rme:Rmet_3045 phage integrase
YP_001561529.1	PFAM: cytochrome c class I; KEGG: aav:Aave_0385 cytochrome c, class I
YP_001561530.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: aav:Aave_0387 transcriptional regulator, fis family
YP_001561531.1	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: pol:Bpro_2036 hydrophobe/amphiphile efflux-1 HAE1
YP_001561532.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pna:Pnap_2887 efflux transporter, RND family, MFP subunit
YP_001561533.1	PFAM: regulatory protein TetR; Tetracycline transcriptional repressor MAATS-type domain protein; KEGG: aav:Aave_0390 transcriptional regulator, TetR family
YP_001561534.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu
YP_001561535.1	forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force
YP_001561536.1	TIGRFAM: transcription termination/antitermination factor NusG; PFAM: KOW domain protein; NGN domain protein; KEGG: ajs:Ajs_3902 NusG antitermination factor
YP_001561537.1	binds directly to 23S ribosomal RNA
YP_001561538.1	in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA
YP_001561539.1	binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit
YP_001561540.1	present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors
YP_001561541.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme
YP_001561542.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter
YP_001561543.1	KEGG: aav:Aave_4529 LemA
YP_001561544.1	TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; KEGG: vei:Veis_2266 sun protein
YP_001561545.1	KEGG: aav:Aave_4527 putative proline rich signal peptide protein
YP_001561546.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: aav:Aave_4526 multi-sensor signal transduction histidine kinase
YP_001561547.1	PFAM: response regulator receiver; helix-turn-helix Fis-type; KEGG: aav:Aave_4525 two component transcriptional regulator, fis family
YP_001561548.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: mms:mma_3216 hypothetical protein
YP_001561549.1	TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: rfr:Rfer_1866 transcriptional regulator, BadM/Rrf2 family
YP_001561550.1	KEGG: net:Neut_0622 protein of unknown function DUF474
YP_001561551.1	TIGRFAM: exodeoxyribonuclease V, gamma subunit; PFAM: Exodeoxyribonuclease V RecC subunit; KEGG: pau:PA14_55690 exodeoxyribonuclease V gamma chain
YP_001561552.1	TIGRFAM: exodeoxyribonuclease V, beta subunit; PFAM: UvrD/REP helicase; KEGG: pmy:Pmen_1986 exodeoxyribonuclease V, beta subunit
YP_001561553.1	KEGG: pmy:Pmen_1987 exodeoxyribonuclease V, alpha subunit; TIGRFAM: exodeoxyribonuclease V, alpha subunit; SMART: AAA ATPase
YP_001561554.1	PFAM: Glutathione S-transferase domain; KEGG: vei:Veis_4930 glutathione S-transferase, N-terminal domain
YP_001561555.1	KEGG: ajs:Ajs_3342 hypothetical protein
YP_001561556.1	PFAM: protein of unknown function DUF461; KEGG: pna:Pnap_1514 protein of unknown function DUF461
YP_001561557.1	KEGG: ajs:Ajs_3888 hypothetical protein
YP_001561558.1	KEGG: aav:Aave_4508 domain of unknown function DUF1745
YP_001561559.1	PFAM: FAD dependent oxidoreductase; KEGG: ajs:Ajs_3886 D-amino-acid dehydrogenase
YP_001561560.1	PFAM: Ig domain protein group 1 domain protein; KEGG: mmu:239611 mucin 19
YP_001561561.1	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; PepSY-associated TM helix domain protein; flavodoxin/nitric oxide synthase; KEGG: aav:Aave_4788 flavodoxin/nitric oxide synthase
YP_001561562.1	TIGRFAM: alkylhydroperoxidase like protein, AhpD family; uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase; KEGG: aav:Aave_4506 uncharacterized peroxidase-related enzyme
YP_001561563.1	PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: aav:Aave_4505 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_001561564.1	PFAM: conserved hypothetical protein; KEGG: aav:Aave_4503 uncharacterized protein UPF0065
YP_001561565.1	KEGG: ajs:Ajs_3882 hypothetical protein
YP_001561566.1	SMART: helix-turn-helix domain protein; KEGG: aav:Aave_4499 transcriptional regulator, XRE family
YP_001561567.1	KEGG: vei:Veis_1658 hypothetical protein
YP_001561568.1	PFAM: phospholipid/glycerol acyltransferase; major facilitator superfamily MFS_1; KEGG: ajs:Ajs_3878 phospholipid/glycerol acyltransferase
YP_001561569.1	PFAM: Saccharopine dehydrogenase; KEGG: pat:Patl_0966 saccharopine dehydrogenase
YP_001561570.1	PFAM: YiaAB two helix domain protein; KEGG: aav:Aave_4490 YiaAB two helix domain protein
YP_001561571.1	KEGG: ajs:Ajs_3874 hypothetical protein
YP_001561572.1	KEGG: aav:Aave_4488 hypothetical protein
YP_001561573.1	KEGG: ajs:Ajs_3872 hypothetical protein
YP_001561574.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rca:Rcas_2750 diguanylate cyclase
YP_001561575.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bra:BRADO2669 conserved hypothetical protein; putative membrane protein; putative diguanylate cyclase (GGDEF domain)
YP_001561576.1	KEGG: mlo:mll7009 hypothetical protein
YP_001561577.1	PFAM: conserved hypothetical protein; KEGG: reh:H16_A0091 probable extra-cytoplasmic solute receptor
YP_001561578.1	KEGG: bch:Bcen2424_6217 hypothetical protein
YP_001561579.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bch:Bcen2424_6218 transcriptional regulator, LysR family
YP_001561580.1	Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr)
YP_001561581.1	PFAM: UspA domain protein; KEGG: ajs:Ajs_3869 UspA domain protein
YP_001561582.1	KEGG: ajs:Ajs_3868 hypothetical protein
YP_001561583.1	PFAM: phospholipase A1; KEGG: aav:Aave_4476 phospholipase A1
YP_001561584.1	KEGG: ajs:Ajs_3866 hypothetical protein
YP_001561585.1	PFAM: UvrD/REP helicase; KEGG: ajs:Ajs_3865 UvrD/REP helicase
YP_001561587.1	PFAM: Miro domain protein; KEGG: dno:DNO_0146 hypothetical protein
YP_001561588.1	KEGG: dno:DNO_0145 hypothetical protein
YP_001561589.1	KEGG: dno:DNO_0148 hypothetical protein
YP_001561590.1	PFAM: Auxin Efflux Carrier; KEGG: ajs:Ajs_3864 auxin efflux carrier
YP_001561591.1	KEGG: rpb:RPB_0468 hypothetical protein
YP_001561592.1	PFAM: glycosyl transferase family 2; KEGG: aav:Aave_0599 glycosyl transferase, family 2
YP_001561593.1	PFAM: GtrA family protein; KEGG: aav:Aave_0598 GtrA family protein
YP_001561594.1	PFAM: YdjC family protein; KEGG: aav:Aave_0597 hypothetical protein
YP_001561595.1	KEGG: aav:Aave_4182 L-asparaginases, type II; TIGRFAM: L-asparaginase, type II; PFAM: Asparaginase/glutaminase
YP_001561596.1	KEGG: aav:Aave_4471 primosomal protein N'; TIGRFAM: primosomal protein N'; PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases
YP_001561597.1	catalyzes the formation of coproporphyrinogen from uroporphyrinogen III
YP_001561598.1	PFAM: conserved hypothetical protein; KEGG: vei:Veis_2295 uncharacterized protein UPF0065
YP_001561599.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mpt:Mpe_A0984 putative enoyl-CoA hydratase
YP_001561600.1	TIGRFAM: phenylacetic acid degradation protein PaaD; PFAM: thioesterase superfamily protein; KEGG: azo:azo0302 phenylacetic acid degradation protein PaaI
YP_001561601.1	TIGRFAM: phenylacetate-CoA ligase; KEGG: mpt:Mpe_A0986 phenylacetate--CoA ligase
YP_001561602.1	PFAM: regulatory protein TetR; KEGG: vei:Veis_3950 transcriptional regulator, TetR family
YP_001561603.1	PFAM: Extracellular ligand-binding receptor; KEGG: vei:Veis_3951 extracellular ligand-binding receptor
YP_001561604.1	PFAM: inner-membrane translocator; KEGG: vei:Veis_3952 inner-membrane translocator
YP_001561605.1	PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_3953 ABC transporter related
YP_001561606.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eba:ebA3560 amino-acid composite ATP-binding transmembrane ABC transporter protein
YP_001561609.1	PFAM: conserved hypothetical protein; KEGG: pol:Bpro_4537 uncharacterized protein UPF0065
YP_001561610.1	PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: pol:Bpro_4535 monooxygenase, FAD-binding
YP_001561611.1	PFAM: beta-lactamase domain protein; KEGG: vei:Veis_4551 beta-lactamase domain protein
YP_001561612.1	PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bbt:BBta_4674 putative transcriptional regulatory protein
YP_001561613.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: aav:Aave_1100 methyl-accepting chemotaxis sensory transducer
YP_001561614.1	KEGG: pol:Bpro_2243 hypothetical protein
YP_001561615.1	KEGG: ajs:Ajs_3857 CoA-binding domain protein
YP_001561616.1	PFAM: Na+/H+ antiporter NhaA; KEGG: ajs:Ajs_3856 Na+/H+ antiporter NhaA
YP_001561618.1	PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: aav:Aave_4456 cytochrome c biogenesis protein, transmembrane region
YP_001561619.1	PFAM: conserved hypothetical protein; KEGG: rme:Rmet_5616 uncharacterized protein UPF0065
YP_001561620.1	PFAM: Creatininase; KEGG: ajs:Ajs_3852 creatininase
YP_001561621.1	PFAM: conserved hypothetical protein; KEGG: pol:Bpro_4316 uncharacterized protein UPF0065
YP_001561622.1	PFAM: Phosphoglycerate mutase; KEGG: aav:Aave_4443 phosphoglycerate mutase
YP_001561623.1	TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: pol:Bpro_4242 phenazine biosynthesis PhzC/PhzF protein
YP_001561624.1	PFAM: aminotransferase class I and II; KEGG: aav:Aave_4437 putative transcriptional regulator, GntR family
YP_001561625.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: ajs:Ajs_3843 hypothetical protein
YP_001561626.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: aav:Aave_4434 transcriptional regulator, GntR family
YP_001561627.1	KEGG: ajs:Ajs_3823 RNA polymerase, sigma 28 subunit, FliA/WhiG family; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2
YP_001561628.1	KEGG: ajs:Ajs_3822 hypothetical protein
YP_001561629.1	PFAM: GTP-binding signal recognition particle SRP54 G- domain; SMART: AAA ATPase; KEGG: aav:Aave_4414 GTP-binding signal recognition particle SRP54, G-domain
YP_001561630.1	TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein; KEGG: ajs:Ajs_3820 flagellar biosynthesis protein FlhA
YP_001561631.1	PFAM: type III secretion exporter; KEGG: ajs:Ajs_3819 type III secretion exporter
YP_001561632.1	PFAM: Chemotaxis phosphatase CheZ; KEGG: aav:Aave_4411 chemotaxis phosphatase, CheZ
YP_001561633.1	PFAM: response regulator receiver; KEGG: aav:Aave_4410 response regulator receiver protein
YP_001561634.1	PFAM: OmpA/MotB domain protein; KEGG: aav:Aave_4409 OmpA/MotB domain protein
YP_001561635.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: ajs:Ajs_3815 MotA/TolQ/ExbB proton channel
YP_001561636.1	SMART: Tetratricopeptide domain protein; KEGG: mfa:Mfla_2639 tetratricopeptide TPR_2
YP_001561637.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: mfa:Mfla_2640 DegT/DnrJ/EryC1/StrS aminotransferase
YP_001561638.1	KEGG: mfa:Mfla_2647 hypothetical protein
YP_001561640.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pfl:PFL_3447 hypothetical protein
YP_001561641.1	PFAM: Rieske [2Fe-2S] domain protein; KEGG: mfa:Mfla_2646 Rieske (2Fe-2S) region
YP_001561642.1	KEGG: xac:XAC1961 acetyltransferase
YP_001561643.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mfa:Mfla_2644 short-chain dehydrogenase/reductase SDR
YP_001561644.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: xac:XAC1963 3-oxoacyl-[ACP] reductase
YP_001561645.1	PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: mfa:Mfla_2642 3-oxoacyl-(acyl-carrier protein) synthase
YP_001561646.1	KEGG: pfl:PFL_1656 acyl carrier protein-related protein
YP_001561647.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bte:BTH_I3210 TPR domain protein
YP_001561648.1	PFAM: flagellin domain protein; KEGG: ajs:Ajs_3813 flagellin domain protein
YP_001561649.1	PFAM: flagellin domain protein; KEGG: ajs:Ajs_3812 flagellin domain protein
YP_001561650.1	PFAM: flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein; KEGG: ajs:Ajs_3811 flagellar hook-associated 2 domain protein
YP_001561651.1	PFAM: flagellar protein FliS; KEGG: ajs:Ajs_3810 flagellar protein FliS
YP_001561652.1	KEGG: ajs:Ajs_3809 flagellar protein FliT
YP_001561653.1	PFAM: Metal-dependent hydrolase HDOD; KEGG: ajs:Ajs_3839 putative signal transduction protein
YP_001561654.1	TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; KEGG: rfr:Rfer_3724 flagellin-like
YP_001561655.1	TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; KEGG: aav:Aave_4430 flagellar hook-associated protein FlgK
YP_001561656.1	KEGG: aav:Aave_4429 flagellar rod assembly protein/muramidase FlgJ; TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2
YP_001561657.1	part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum
YP_001561658.1	PFAM: flagellar L-ring protein; KEGG: aav:Aave_4426 flagellar L-ring protein
YP_001561659.1	TIGRFAM: flagellar basal-body rod protein FlgG; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: aav:Aave_4425 flagellar basal-body rod protein FlgG
YP_001561660.1	TIGRFAM: flagellar basal-body rod protein FlgF; PFAM: flagellar basal body rod protein; KEGG: aav:Aave_4424 transcriptional regulator, fis family
YP_001561661.1	PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; KEGG: vei:Veis_0566 flagellar basal body FlaE domain protein
YP_001561662.1	PFAM: flagellar hook capping protein; KEGG: aav:Aave_4422 flagellar hook capping protein
YP_001561663.1	TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: ajs:Ajs_3828 flagellar basal-body rod protein FlgC
YP_001561664.1	TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: flagellar basal body rod protein; KEGG: ajs:Ajs_3827 flagellar basal-body rod protein FlgB
YP_001561665.1	KEGG: aav:Aave_4419 SAF domain
YP_001561666.1	KEGG: aav:Aave_4418 anti-sigma-28 factor, FlgM
YP_001561667.1	KEGG: vei:Veis_0572 hypothetical protein
YP_001561668.1	TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: aav:Aave_4396 flagellar hook-basal body complex subunit FliE
YP_001561669.1	TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring domain protein; KEGG: aav:Aave_4395 flagellar M-ring protein FliF
YP_001561670.1	PFAM: flagellar motor switch protein FliG; KEGG: aav:Aave_4394 flagellar motor switch protein FliG
YP_001561671.1	PFAM: flagellar assembly protein FliH; KEGG: aav:Aave_4393 flagellar assembly protein FliH
YP_001561672.1	KEGG: aav:Aave_4392 flagellar protein export ATPase FliI; TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; SMART: AAA ATPase
YP_001561673.1	TIGRFAM: flagellar export protein FliJ; KEGG: aav:Aave_4391 flagellar export protein FliJ
YP_001561674.1	PFAM: flagellar hook-length control protein; KEGG: ajs:Ajs_3802 flagellar hook-length control protein
YP_001561675.1	PFAM: flagellar basal body-associated protein FliL; KEGG: ajs:Ajs_3801 flagellar basal body-associated protein FliL
YP_001561676.1	PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: ajs:Ajs_3800 flagellar motor switch protein FliM
YP_001561677.1	TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: aav:Aave_4387 flagellar motor switch protein FliN
YP_001561678.1	PFAM: flagellar biosynthesis protein FliO; KEGG: ajs:Ajs_3798 flagellar biosynthesis protein, FliO
YP_001561679.1	FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus
YP_001561680.1	TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; KEGG: ajs:Ajs_3796 flagellar biosynthetic protein FliQ
YP_001561681.1	TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; KEGG: ajs:Ajs_3795 flagellar biosynthetic protein FliR
YP_001561682.1	PFAM: regulatory protein LuxR; response regulator receiver; KEGG: aav:Aave_4382 two component transcriptional regulator, LuxR family
YP_001561683.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: ajs:Ajs_3793 response regulator receiver sensor signal transduction histidine kinase
YP_001561684.1	KEGG: ajs:Ajs_3792 hypothetical protein
YP_001561685.1	PFAM: response regulator receiver; KEGG: vei:Veis_2177 response regulator receiver protein
YP_001561686.1	PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: aav:Aave_4378 CheA signal transduction histidine kinase
YP_001561687.1	PFAM: CheW domain protein; KEGG: vei:Veis_2175 putative CheW protein
YP_001561688.1	PFAM: MCP methyltransferase CheR-type; KEGG: rfr:Rfer_0569 MCP methyltransferase, CheR-type
YP_001561689.1	stimulates methylation of MCP proteins; catalyzes the conversion of glutamine residues to glutamate on methyl-accepting chemotaxis receptors
YP_001561690.1	PFAM: CheB methylesterase; response regulator receiver; KEGG: aav:Aave_4374 response regulator receiver modulated CheB methylesterase
YP_001561691.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_3785 ABC transporter related
YP_001561692.1	PFAM: glutamine amidotransferase class-II; KEGG: aav:Aave_0403 glutamine amidotransferase, class-II
YP_001561693.1	KEGG: bte:BTH_I2428 hypothetical protein
YP_001561694.1	4-OT; member of subfamily 5; forms a dimer; the function in the Escherichia coli cell is unknown
YP_001561695.1	KEGG: aav:Aave_0406 hypothetical protein
YP_001561696.1	catalyzes the formation of malate from glyoxylate and acetyl-CoA
YP_001561697.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_0339 transcriptional regulator, LysR family
YP_001561698.1	KEGG: aav:Aave_0410 hypothetical protein
YP_001561699.1	KEGG: aav:Aave_0412 putative transmembrane protein
YP_001561700.1	catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase
YP_001561701.1	PFAM: Sporulation domain protein; KEGG: aav:Aave_0415 sporulation domain protein
YP_001561702.1	PFAM: DSBA oxidoreductase; KEGG: ajs:Ajs_0345 DsbA oxidoreductase
YP_001561703.1	TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA family protein; KEGG: ajs:Ajs_0346 OstA family protein
YP_001561704.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_0418 ABC transporter-related protein
YP_001561705.1	TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor; sigma-54 factor core-binding region; sigma-54 DNA-binding domain protein; KEGG: ajs:Ajs_0348 RNA polymerase, sigma 54 subunit, RpoN
YP_001561706.1	PFAM: sigma-54 factor interaction domain-containing protein; regulator of RNA terminal phosphate cyclase; SMART: AAA ATPase; KEGG: pna:Pnap_0497 regulator of RNA terminal phosphate cyclase
YP_001561707.1	PFAM: band 7 protein; KEGG: pol:Bpro_1471 band 7 protein
YP_001561708.1	KEGG: sdy:SDY_3647 hypothetical protein
YP_001561709.1	PFAM: protein of unknown function UPF0027; KEGG: pol:Bpro_1473 protein of unknown function UPF0027
YP_001561710.1	KEGG: bam:Bamb_5431 nucleotidyltransferase-like protein
YP_001561711.1	KEGG: pna:Pnap_0499 RNA-3'-phosphate cyclase; TIGRFAM: RNA 3'-phosphate cyclase; PFAM: RNA 3'-terminal phosphate cyclase
YP_001561712.1	TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: aav:Aave_0120 arginase
YP_001561713.1	catalyzes the formation of L-proline from L-ornithine
YP_001561714.1	PFAM: putative RNA methylase; THUMP domain protein; KEGG: aav:Aave_0422 putative RNA methylase
YP_001561715.1	KEGG: aav:Aave_0423 PilT protein domain protein
YP_001561716.1	PFAM: small multidrug resistance protein; KEGG: swi:Swit_3611 small multidrug resistance protein
YP_001561717.1	PFAM: GCN5-related N-acetyltransferase; KEGG: psa:PST_2696 IAA acetyltransferase
YP_001561718.1	PFAM: ferredoxin; cytochrome P450; Oxidoreductase FAD-binding domain protein; KEGG: reu:Reut_B5278 ferredoxin:cytochrome P450:oxidoreductase FAD/NAD(P)-binding:oxidoreductase FAD-binding region
YP_001561719.1	PFAM: conserved hypothetical protein; KEGG: reh:H16_B1280 probable extra-cytoplasmic solute receptor
YP_001561720.1	PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: reu:Reut_B5276 regulatory protein, IclR
YP_001561721.1	KEGG: aav:Aave_0425 hypothetical protein
YP_001561722.1	PFAM: regulatory protein IclR; KEGG: ajs:Ajs_0111 regulatory proteins, IclR
YP_001561723.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: ajs:Ajs_0112 L-carnitine dehydratase/bile acid-inducible protein F
YP_001561724.1	PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0108 uncharacterized protein UPF0065
YP_001561725.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ajs:Ajs_0106 short-chain dehydrogenase/reductase SDR
YP_001561726.1	TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: ajs:Ajs_0105 acetyl-CoA acetyltransferases
YP_001561727.1	PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_0104 AMP-dependent synthetase and ligase
YP_001561728.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_0103 acyl-CoA dehydrogenase domain protein
YP_001561729.1	TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; KEGG: aav:Aave_3486 rhs element Vgr protein
YP_001561730.1	PFAM: PAAR repeat-containing protein; KEGG: ppr:PBPRA3102 hypothetical protein
YP_001561731.1	KEGG: mxa:MXAN_4169 hypothetical protein
YP_001561733.1	KEGG: bps:BPSS1058 bacteriophage GP30 protein
YP_001561735.1	KEGG: mxa:MXAN_6136 hypothetical protein
YP_001561736.1	KEGG: aav:Aave_4007 hypothetical protein
YP_001561737.1	TIGRFAM: yecA family protein; PFAM: SEC-C motif domain protein; KEGG: reu:Reut_B5710 sec-C motif
YP_001561738.1	PFAM: helix-turn-helix domain protein; KEGG: gur:Gura_0591 transcriptional regulator, XRE family
YP_001561739.1	PFAM: CinA domain protein; KEGG: ajs:Ajs_0354 CinA domain protein
YP_001561740.1	PFAM: phosphatidylglycerophosphatase A; KEGG: ajs:Ajs_0355 phosphatidylglycerophosphatase A
YP_001561741.1	KEGG: aav:Aave_0431 hypothetical protein
YP_001561742.1	KEGG: pol:Bpro_4471 thiamine-monophosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein domain protein
YP_001561743.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_1817 transcriptional regulator, LysR family
YP_001561744.1	PFAM: protein of unknown function DUF1446; KEGG: ajs:Ajs_1818 protein of unknown function DUF1446
YP_001561745.1	KEGG: ajs:Ajs_1819 hypothetical protein
YP_001561746.1	PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_1820 uncharacterized protein UPF0065
YP_001561747.1	KEGG: aav:Aave_3389 hypothetical protein
YP_001561749.1	ATP-dependent; carboxylate-amine ligase with weak glutamate--cysteine ligase activity
YP_001561750.1	PFAM: sodium/hydrogen exchanger; KEGG: aav:Aave_0435 sodium/hydrogen exchanger
YP_001561751.1	KEGG: ajs:Ajs_0359 putative site-specific recombinase transmembrane protein
YP_001561752.1	protein associated with Co2+ and Mg2+ efflux
YP_001561753.1	PFAM: ribulose-phosphate 3-epimerase; KEGG: ajs:Ajs_0361 ribulose-phosphate 3-epimerase
YP_001561755.1	KEGG: vei:Veis_4644 porin, gram-negative type
YP_001561756.1	PFAM: Sel1 domain protein repeat-containing protein
YP_001561757.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pfo:Pfl_3855 two component heavy metal response transcriptional regulator, winged helix family
YP_001561758.1	PFAM: Transketolase central region; Transketolase domain protein; KEGG: pol:Bpro_1462 transketolase, central region
YP_001561759.1	PFAM: Transketolase domain protein; KEGG: pol:Bpro_1461 transketolase-like
YP_001561760.1	TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pol:Bpro_1457 TRAP dicarboxylate transporter-DctM subunit
YP_001561761.1	PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: pol:Bpro_1456 tripartite ATP-independent periplasmic transporter, DctQ component
YP_001561762.1	TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: pol:Bpro_1455 TRAP dicarboxylate transporter, DctP subunit
YP_001561763.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pol:Bpro_1454 short-chain dehydrogenase/reductase SDR
YP_001561764.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pol:Bpro_1453 transcriptional regulator, LysR family
YP_001561765.1	KEGG: cvi:CV_2953 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001561766.1	KEGG: aav:Aave_2236 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001561767.1	PFAM: extracellular solute-binding protein family 3; KEGG: azo:azo0499 putative cyclohexadienyl dehydratase
YP_001561768.1	PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: shw:Sputw3181_0802 response regulator receiver modulated metal dependent phosphohydrolase
YP_001561769.1	PFAM: response regulator receiver; KEGG: aav:Aave_2238 response regulator receiver protein
YP_001561770.1	KEGG: aav:Aave_0592 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_001561771.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bvi:Bcep1808_5173 methyl-accepting chemotaxis sensory transducer
YP_001561772.1	PFAM: CheW domain protein; KEGG: rfr:Rfer_0924 CheW protein
YP_001561773.1	PFAM: chemotaxis sensory transducer; KEGG: bte:BTH_I2374 methyl-accepting chemotaxis protein
YP_001561774.1	TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ajs:Ajs_0363 phosphoglycolate phosphatase
YP_001561775.1	catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine
YP_001561776.1	KEGG: aav:Aave_2543 hypothetical protein
YP_001561777.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bch:Bcen2424_3439 two component transcriptional regulator, winged helix family
YP_001561778.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bch:Bcen2424_3440 periplasmic sensor signal transduction histidine kinase
YP_001561779.1	KEGG: ajs:Ajs_0365 putative lipoprotein transmembrane
YP_001561780.1	PFAM: Patatin; KEGG: swi:Swit_5143 patatin
YP_001561783.1	with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine
YP_001561784.1	PFAM: Chorismate mutase; KEGG: aav:Aave_0443 chorismate mutase
YP_001561785.1	TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: pla:Plav_3453 acetate kinase
YP_001561786.1	PFAM: phosphate acetyl/butaryl transferase; MaoC domain protein dehydratase; KEGG: pla:Plav_3451 phosphate butyryltransferase
YP_001561787.1	KEGG: pla:Plav_3450 hypothetical protein
YP_001561788.1	KEGG: pla:Plav_3448 hypothetical protein
YP_001561789.1	PFAM: ABC-2 type transporter; KEGG: pla:Plav_3447 ABC-2 type transporter
YP_001561790.1	PFAM: ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase; KEGG: ajs:Ajs_2361 ABC transporter related
YP_001561791.1	PFAM: secretion protein HlyD family protein; KEGG: pla:Plav_3445 secretion protein HlyD family protein
YP_001561792.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: pla:Plav_3444 RND efflux system, outer membrane lipoprotein, NodT family
YP_001561793.1	Catalyzes a key regulatory step in fatty acid biosynthesis
YP_001561794.1	KEGG: mms:mma_1885 hypothetical protein
YP_001561795.1	KEGG: fra:Francci3_2920 hypothetical protein
YP_001561796.1	PFAM: toxic anion resistance family protein; KEGG: prw:PsycPRwf_2138 toxic anion resistance family protein
YP_001561797.1	PFAM: von Willebrand factor type A; KEGG: fra:Francci3_2918 von Willebrand factor, type A
YP_001561798.1	KEGG: mca:MCA1631 hypothetical protein
YP_001561799.1	TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: pna:Pnap_3652 glutamine amidotransferase of anthranilate synthase
YP_001561800.1	Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate
YP_001561801.1	involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water
YP_001561802.1	KEGG: bja:bll6026 probable outer membrane protein B
YP_001561803.1	PFAM: Fibronectin type III domain protein; KEGG: aav:Aave_4710 ubiquitin
YP_001561804.1	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
YP_001561805.1	PFAM: beta-lactamase domain protein; KEGG: rme:Rmet_2149 beta-lactamase-like protein
YP_001561806.1	PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: aav:Aave_2665 transcriptional regulator, Crp/Fnr family
YP_001561807.1	PFAM: protein of unknown function ATP binding; Miro domain protein; KEGG: nmc:NMC1671 hypothetical protein
YP_001561809.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: vei:Veis_0178 transcriptional regulator, LysR family
YP_001561810.1	PFAM: conserved hypothetical protein; KEGG: vei:Veis_0179 uncharacterized protein UPF0065
YP_001561811.1	PFAM: gamma-glutamyltranspeptidase; KEGG: aav:Aave_0589 gamma-glutamyltransferase
YP_001561812.1	KEGG: rha:RHA1_ro03885 hypothetical protein
YP_001561813.1	PFAM: Xylose isomerase domain protein TIM barrel; KEGG: vei:Veis_3271 xylose isomerase domain protein TIM barrel
YP_001561814.1	PFAM: inner-membrane translocator; KEGG: ypi:YpsIP31758_3268 carbohydrate uptake ABC transporter 2 (CUT2) family, permease protein
YP_001561815.1	PFAM: inner-membrane translocator; KEGG: rle:pRL120193 putative permease component of ABC transporter
YP_001561816.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rle:pRL80086 putative ATP-binding component of ABC transporter
YP_001561817.1	KEGG: sme:SMb20484 putative ABC transporter periplasmic sugar-binding protein
YP_001561818.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: rsh:Rsph17029_3435 regulatory protein, LacI
YP_001561819.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bte:BTH_II0814 transcriptional regulator, LysR family
YP_001561820.1	PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: bpl:BURPS1106A_A2112 dehydrogenase, FMN-dependent family
YP_001561821.1	PFAM: conserved hypothetical protein; KEGG: aav:Aave_1312 uncharacterized protein UPF0065
YP_001561822.1	TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: pol:Bpro_2923 alkylhydroperoxidase AhpD core
YP_001561823.1	PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_4073 uncharacterized protein UPF0065
YP_001561824.1	TIGRFAM: CitB domain protein; KEGG: ajs:Ajs_4071 CitB domain protein
YP_001561825.1	catalyzes the oxidation of tricarballylate to cis-aconitate; FAD-dependent; required for the utilization of tricarballylate as a carbon and energy source by S. enterica
YP_001561826.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_4069 transcriptional regulator, LysR family
YP_001561827.1	PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: rme:Rmet_5383 transcriptional regulator, IclR family
YP_001561828.1	PFAM: conserved hypothetical protein; KEGG: rme:Rmet_5382 uncharacterized protein UPF0065
YP_001561829.1	PFAM: AMP-dependent synthetase and ligase; KEGG: rme:Rmet_5381 AMP-dependent synthetase and ligase
YP_001561830.1	KEGG: rme:Rmet_5380 hypothetical protein
YP_001561831.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bbr:BB1217 hypothetical protein
YP_001561832.1	PFAM: conserved hypothetical protein; KEGG: reh:H16_B2533 probable extra-cytoplasmic solute receptor
YP_001561833.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
YP_001561834.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bbr:BB1219 LysR-family transcriptional regulator
YP_001561835.1	catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs
YP_001561836.1	PFAM: beta-lactamase; KEGG: reh:H16_A2128 beta-lactamase class C
YP_001561837.1	PFAM: ATP-binding region ATPase domain protein; KEGG: rme:Rmet_5166 putative signal transduction histidine kinase
YP_001561838.1	PFAM: regulatory protein TetR; KEGG: vei:Veis_3950 transcriptional regulator, TetR family
YP_001561839.1	TIGRFAM: phenylacetic acid degradation protein paaN; PFAM: Aldehyde Dehydrogenase_; KEGG: eba:ebA3541 PaaZ protein involved in aerobic phenylacetate metabolism
YP_001561840.1	KEGG: mpt:Mpe_A0986 phenylacetate--CoA ligase; TIGRFAM: phenylacetate-CoA ligase; PFAM: AMP-dependent synthetase and ligase
YP_001561841.1	with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA
YP_001561842.1	with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation
YP_001561843.1	TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: vei:Veis_3947 phenylacetate-CoA oxygenase, PaaI subunit
YP_001561844.1	TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: protein of unknown function DUF59; KEGG: mpt:Mpe_A0990 putative ring oxidation complex protein 3
YP_001561845.1	TIGRFAM: phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mpt:Mpe_A0991 putative ring-hydroxylation complex protein 4
YP_001561846.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: aav:Aave_0427 sulphate transporter
YP_001561848.1	TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: aav:Aave_4713 single-strand binding protein
YP_001561849.1	PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_4065 major facilitator superfamily MFS_1
YP_001561850.1	TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: aav:Aave_4708 excinuclease ABC, A subunit
YP_001561851.1	PFAM: FAD dependent oxidoreductase; KEGG: aav:Aave_2431 FAD dependent oxidoreductase
YP_001561852.1	PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: ajs:Ajs_4061 hypothetical protein
YP_001561853.1	PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_4060 uncharacterized protein UPF0065
YP_001561854.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_4698 transcriptional regulator, LysR family
YP_001561855.1	type 2 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase
YP_001561856.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: ajs:Ajs_4057 protein of unknown function DUF6, transmembrane
YP_001561857.1	KEGG: mfa:Mfla_2213 hypothetical protein
YP_001561858.1	KEGG: ajs:Ajs_2887 hypothetical protein
YP_001561859.1	PFAM: phosphoglycerate kinase; KEGG: ajs:Ajs_4056 phosphoglycerate kinase
YP_001561860.1	PFAM: branched-chain amino acid transport; KEGG: ajs:Ajs_4055 branched-chain amino acid transport
YP_001561861.1	PFAM: AzlC family protein; KEGG: ajs:Ajs_4054 AzlC family protein
YP_001561862.1	TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: ajs:Ajs_4053 methionyl-tRNA formyltransferase
YP_001561863.1	KEGG: ajs:Ajs_4052 putative lipoprotein transmembrane
YP_001561864.1	KEGG: ajs:Ajs_4051 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase
YP_001561865.1	PFAM: Peptidoglycan-binding LysM; KEGG: aav:Aave_4687 peptidoglycan-binding LysM
YP_001561866.1	TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: ajs:Ajs_4049 transcriptional regulator, fis family
YP_001561867.1	KEGG: ajs:Ajs_4003 hypothetical protein
YP_001561868.1	forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF
YP_001561869.1	part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane
YP_001561870.1	TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: mpt:Mpe_A0276 preprotein translocase YajC subunit
YP_001561871.1	Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates
YP_001561872.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: ajs:Ajs_4009 putative transcriptional regulator, AsnC family
YP_001561873.1	PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: aav:Aave_4649 protein of unknown function DUF894, DitE
YP_001561874.1	PFAM: MltA domain protein; 3D domain protein; KEGG: ajs:Ajs_4013 MltA domain protein
YP_001561875.1	PFAM: OmpA/MotB domain protein; KEGG: aav:Aave_4652 OmpA/MotB domain protein
YP_001561876.1	KEGG: rso:RSp1185 probable D-serine deaminase (d-serine dehydratase) protein
YP_001561877.1	PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: vei:Veis_4829 response regulator receiver protein
YP_001561878.1	KEGG: aav:Aave_4654 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001561879.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: aav:Aave_4655 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_001561880.1	KEGG: aav:Aave_4656 hypothetical protein
YP_001561881.1	PFAM: glutamate-ammonia ligase adenylyltransferase; KEGG: ajs:Ajs_4019 (glutamate--ammonia-ligase) adenylyltransferase
YP_001561882.1	PFAM: Glutathione S-transferase domain; KEGG: ajs:Ajs_4025 glutathione S-transferase, N-terminal domain
YP_001561883.1	Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide
YP_001561884.1	PFAM: acyltransferase 3; KEGG: xom:XOO_0713 putative O-antigen acetylase
YP_001561885.1	PFAM: YaeQ family protein; KEGG: ajs:Ajs_4027 YaeQ family protein
YP_001561886.1	KEGG: rme:Rmet_4803 hypothetical protein
YP_001561887.1	PFAM: protein of unknown function DUF1289; KEGG: vei:Veis_2838 protein of unknown function DUF1289
YP_001561888.1	PFAM: Integral membrane protein TerC; KEGG: ajs:Ajs_4030 integral membrane protein TerC
YP_001561889.1	KEGG: aav:Aave_4674 hypothetical protein
YP_001561890.1	PFAM: membrane protein of unknown function; KEGG: vei:Veis_0393 membrane protein of unknown function
YP_001561891.1	PFAM: peptidase M48 Ste24p; KEGG: ajs:Ajs_4033 peptidase M48, Ste24p
YP_001561892.1	TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: ajs:Ajs_4034 molybdenum cofactor biosynthesis protein C
YP_001561894.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: gsu:GSU2601 TPR domain/SEC-C motif domain protein
YP_001561895.1	KEGG: mpt:Mpe_A0065 pilin
YP_001561896.1	PFAM: Forkhead-associated protein; KEGG: aav:Aave_4680 FHA domain containing protein
YP_001561897.1	PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: mpt:Mpe_A0068 serine/threonine specific protein phosphatase (putative)
YP_001561898.1	PFAM: Integral membrane protein TerC; KEGG: ajs:Ajs_4045 integral membrane protein TerC
YP_001561899.1	Catalyzes the only substrate-level phosphorylation in the TCA cycle
YP_001561900.1	catalyzes the interconversion of succinyl-CoA and succinate
YP_001561901.1	catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis
YP_001561902.1	KEGG: vei:Veis_0689 hypothetical protein
YP_001561903.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: esa:ESA_02149 hypothetical protein
YP_001561904.1	KEGG: aav:Aave_4641 regulatory protein RecX
YP_001561905.1	KEGG: ajs:Ajs_4001 RecA protein; TIGRFAM: recA protein; PFAM: RecA domain protein; SMART: AAA ATPase
YP_001561906.1	PFAM: regulatory protein MarR; KEGG: ajs:Ajs_4000 transcriptional regulator, MarR family
YP_001561907.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ajs:Ajs_3999 two component transcriptional regulator, winged helix family
YP_001561908.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; KEGG: aav:Aave_4637 integral membrane sensor signal transduction histidine kinase
YP_001561909.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_3997 transcriptional regulator, LysR family
YP_001561910.1	PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_3996 uncharacterized protein UPF0065
YP_001561911.1	PFAM: N-formylglutamate amidohydrolase; KEGG: ajs:Ajs_3995 N-formylglutamate amidohydrolase
YP_001561912.1	PFAM: Sporulation domain protein; KEGG: aav:Aave_4630 sporulation domain protein
YP_001561913.1	TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; KEGG: aav:Aave_4629 biotin--acetyl-CoA-carboxylase ligase
YP_001561914.1	PFAM: nuclear protein SET; KEGG: ajs:Ajs_3991 nuclear protein SET
YP_001561915.1	decatenates replicating daughter chromosomes
YP_001561916.1	KEGG: aav:Aave_4511 protein tyrosine/serine phosphatase
YP_001561917.1	PFAM: Integrase catalytic region; KEGG: ppf:Pput_3520 integrase, catalytic region
YP_001561918.1	PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: rme:Rmet_4835 glycosyl transferase, family 51
YP_001561919.1	PFAM: Rubrerythrin; Ferritin Dps family protein; KEGG: aav:Aave_3866 ferritin, Dps family protein
YP_001561920.1	PFAM: glutathione peroxidase; KEGG: ajs:Ajs_0173 glutathione peroxidase
YP_001561921.1	PFAM: Asparaginase/glutaminase; KEGG: har:HEAR1103 putative L-asparaginase; putative signal peptide protein
YP_001561922.1	PFAM: RDD domain containing protein; KEGG: aav:Aave_4623 RDD domain containing protein
YP_001561923.1	KEGG: aav:Aave_0036 hypothetical protein
YP_001561925.1	PFAM: SMC domain protein; KEGG: dar:Daro_1919 SMC protein, N-terminal
YP_001561926.1	with SbcC cleaves DNA hairpin structure, also has 5' single-strand endonuclease activity
YP_001561927.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ajs:Ajs_3978 glyoxalase/bleomycin resistance protein/dioxygenase
YP_001561929.1	KEGG: aav:Aave_4248 N-acetylmuramoyl-L-alanine amidase, family 2
YP_001561930.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: ajs:Ajs_2324 methyltransferase type 11
YP_001561931.1	PFAM: DTW domain containing protein; KEGG: pol:Bpro_4750 hypothetical protein
YP_001561932.1	PFAM: acyltransferase 3; KEGG: ajs:Ajs_2326 acyltransferase 3
YP_001561933.1	PFAM: protein of unknown function DUF924; KEGG: tbd:Tbd_0861 hypothetical protein
YP_001561934.1	PFAM: HipA domain protein; KEGG: mxa:MXAN_0015 hypothetical protein
YP_001561935.1	PFAM: porin Gram-negative type; KEGG: pol:Bpro_4315 putative transmembrane outer membrane porin signal peptide protein
YP_001561936.1	KEGG: ajs:Ajs_3969 hypothetical protein
YP_001561937.1	PFAM: conserved hypothetical protein; KEGG: rme:Rmet_4203 uncharacterized protein UPF0065
YP_001561938.1	PFAM: Glutathione S-transferase domain; KEGG: cvi:CV_2745 probable glutathione S-transferase family protein
YP_001561939.1	PFAM: Pirin domain protein; KEGG: ajs:Ajs_3965 pirin domain protein domain protein
YP_001561940.1	PFAM: Carboxymuconolactone decarboxylase; KEGG: mpt:Mpe_A3531 hydrolase or acyltransferase-like protein
YP_001561941.1	PFAM: fumarate lyase; KEGG: pol:Bpro_1855 3-carboxy-cis,cis-muconate cycloisomerase
YP_001561942.1	PFAM: conserved hypothetical protein; KEGG: pol:Bpro_1233 uncharacterized protein UPF0065
YP_001561943.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: vei:Veis_3047 transcriptional regulator, LysR family
YP_001561944.1	KEGG: ajs:Ajs_3964 peptidylprolyl isomerase, FKBP-type
YP_001561945.1	extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols; part of the bacterial aromatic compound degradation pathway
YP_001561946.1	extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols; part of the bacterial aromatic compound degradation pathway
YP_001561947.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pna:Pnap_2735 transcriptional regulator, LysR family
YP_001561948.1	PFAM: glutamine amidotransferase class-I; peptidase C26; KEGG: ajs:Ajs_3963 peptidase C26
YP_001561949.1	KEGG: aav:Aave_4596 ribosomal subunit interface protein, putative
YP_001561950.1	PFAM: Pirin domain protein; KEGG: csa:Csal_1778 pirin-like protein
YP_001561952.1	PFAM: OsmC family protein; KEGG: acb:A1S_1522 predicted redox disulfide bond formation protein OsmC-like protein
YP_001561953.1	PFAM: beta-lactamase domain protein; KEGG: rpa:RPA0365 beta-lactamase-like
YP_001561954.1	PFAM: regulatory protein ArsR; transcriptional regulator TrmB; KEGG: rme:Rmet_2370 transcriptional regulator, ArsR family
YP_001561955.1	PFAM: Rhodanese domain protein; KEGG: rme:Rmet_2371 rhodanese-like protein
YP_001561956.1	PFAM: peptidase M24; peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein; KEGG: ajs:Ajs_3957 peptidase M24
YP_001561957.1	KEGG: csa:Csal_2373 abortive infection protein
YP_001561958.1	KEGG: rha:RHA1_ro07024 hypothetical protein
YP_001561959.1	PFAM: AMP-dependent synthetase and ligase; KEGG: rme:Rmet_4454 AMP-dependent synthetase and ligase
YP_001561960.1	KEGG: rme:Rmet_4455 hypothetical protein
YP_001561961.1	catalyzes the formation of phosphoenolpyruvate from pyruvate
YP_001561962.1	PFAM: phosphoesterase PA-phosphatase related; KEGG: aav:Aave_4580 phosphoesterase, PA-phosphatase related protein
YP_001561963.1	KEGG: vei:Veis_0197 PAP2 (acid phosphatase) superfamily protein-like protein
YP_001561964.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: aav:Aave_4578 two component transcriptional regulator, winged helix family
YP_001561965.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: aav:Aave_4577 histidine kinase
YP_001561966.1	KEGG: aav:Aave_4576 fructose-bisphosphate aldolase, class II, Calvin cycle subtype; TIGRFAM: ketose-bisphosphate aldolase; fructose-bisphosphate aldolase, class II, Calvin cycle subtype; PFAM: ketose-bisphosphate aldolase class-II
YP_001561967.1	KEGG: bbr:BB1856 putative integral membrane protein
YP_001561968.1	PFAM: Nucleotidyl transferase; KEGG: aav:Aave_4583 nucleotidyl transferase
YP_001561969.1	TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: ajs:Ajs_3959 transketolase
YP_001561970.1	TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; KEGG: ajs:Ajs_3960 glyceraldehyde-3-phosphate dehydrogenase, type I
YP_001561971.1	KEGG: xac:XAC3665 hypothetical protein
YP_001561972.1	TIGRFAM: export-related chaperone CsaA; PFAM: t-RNA-binding domain protein; KEGG: mfa:Mfla_1103 secretion chaperone CsaA
YP_001561973.1	PFAM: conserved hypothetical protein; KEGG: pol:Bpro_3412 uncharacterized protein UPF0065
YP_001561974.1	KEGG: rme:Rmet_3159 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein
YP_001561975.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pna:Pnap_4004 transcriptional regulator, LysR family
YP_001561976.1	PFAM: aldo/keto reductase; KEGG: esa:ESA_03132 hypothetical protein
YP_001561977.1	PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_3950 AMP-dependent synthetase and ligase
YP_001561979.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: mlo:mll7935 transcriptional regulator
YP_001561980.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: pol:Bpro_3691 cupin 2, conserved barrel
YP_001561981.1	PFAM: alpha/beta hydrolase fold; KEGG: pol:Bpro_3690 alpha/beta hydrolase fold
YP_001561982.1	PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: pol:Bpro_3689 transcriptional regulator, IclR family
YP_001561983.1	catalyzes the formation of L-aspartate to iminoaspartate in NAD(+) biosynthesis
YP_001561984.1	enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine
YP_001561985.1	PFAM: Integrase catalytic region; KEGG: ppf:Pput_3520 integrase, catalytic region
YP_001561986.1	KEGG: rso:RSc1866 hypothetical protein
YP_001561987.1	member of a large family of NAD or NADP-dependent oxidoreductases; paralogs occur in many bacteria
YP_001561988.1	PFAM: regulatory protein MarR; regulatory protein IclR; Transcriptional regulator IclR; KEGG: pol:Bpro_3689 transcriptional regulator, IclR family
YP_001561989.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pol:Bpro_3688 short-chain dehydrogenase/reductase SDR
YP_001561990.1	PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: reu:Reut_B3575 hypothetical protein
YP_001561991.1	PFAM: Aldehyde Dehydrogenase_; KEGG: pol:Bpro_3685 betaine-aldehyde dehydrogenase
YP_001561992.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pol:Bpro_3684 glyoxalase/bleomycin resistance protein/dioxygenase
YP_001561993.1	PFAM: conserved hypothetical protein; KEGG: pol:Bpro_3683 twin-arginine translocation pathway signal
YP_001561994.1	KEGG: pol:Bpro_3682 hypothetical protein
YP_001561995.1	PFAM: Rieske [2Fe-2S] domain protein; KEGG: pol:Bpro_3681 Rieske (2Fe-2S) region
YP_001561996.1	PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: pol:Bpro_3680 ferredoxin
YP_001561997.1	PFAM: porin Gram-negative type; KEGG: pol:Bpro_3679 porin, gram-negative type
YP_001561998.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: spe:Spro_3970 major facilitator superfamily MFS_1
YP_001561999.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bbr:BB0448 probable transcriptional regulator
YP_001562000.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bpe:BP0523 probable haloacid dehalogenase
YP_001562001.1	PFAM: conserved hypothetical protein; KEGG: rpc:RPC_3267 uncharacterized protein UPF0065
YP_001562002.1	PFAM: alanine racemase domain protein; KEGG: bpe:BP0522 putative metal-activated pyridoxal enzyme
YP_001562003.1	PFAM: Endoribonuclease L-PSP; KEGG: bbr:BB0442 hypothetical protein
YP_001562004.1	TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: ajs:Ajs_3948 magnesium and cobalt transport protein CorA
YP_001562005.1	KEGG: aav:Aave_4571 phage SPO1 DNA polymerase-related protein
YP_001562006.1	TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: aav:Aave_4570 ribosomal-protein-alanine acetyltransferase
YP_001562007.1	PFAM: peptidase M22 glycoprotease; KEGG: ajs:Ajs_3940 peptidase M22, glycoprotease
YP_001562008.1	KEGG: ajs:Ajs_3939 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C
YP_001562009.1	PFAM: lipolytic protein G-D-S-L family; KEGG: aav:Aave_4567 phospholipase/lecithinase/hemolysin-like protein
YP_001562010.1	PFAM: OmpW family protein; KEGG: aav:Aave_4566 OmpW family protein
YP_001562011.1	TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: pol:Bpro_4547 methylmalonate-semialdehyde dehydrogenase
YP_001562012.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reu:Reut_B5829 regulatory protein, LysR:LysR, substrate-binding
YP_001562013.1	PFAM: conserved hypothetical protein; KEGG: reh:H16_B1814 probable extra-cytoplasmic solute receptor
YP_001562014.1	PFAM: conserved hypothetical protein; KEGG: vei:Veis_0062 uncharacterized protein UPF0065
YP_001562015.1	PFAM: Myo-inositol catabolism IolB domain protein; KEGG: vei:Veis_0068 myo-inositol catabolism IolB domain protein
YP_001562016.1	PFAM: PfkB domain protein; KEGG: rso:RSc1240 probable transferase kinase protein
YP_001562017.1	PFAM: sugar isomerase (SIS); KEGG: vei:Veis_4368 transcriptional regulator, RpiR family
YP_001562018.1	KEGG: ppr:PBPRC0042 hypothetical protein
YP_001562019.1	TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5 domain protein; SUA5/yciO/yrdC domain; KEGG: ajs:Ajs_3936 SUA5/YciO/YrdC/YwlC family protein
YP_001562020.1	With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway
YP_001562021.1	KEGG: ajs:Ajs_3934 phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
YP_001562022.1	KEGG: mpt:Mpe_A0314 hypothetical protein
YP_001562023.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A0313 ABC-type multidrug transport system ATPase component-like protein
YP_001562024.1	TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: ajs:Ajs_3931 thioredoxin
YP_001562025.1	KEGG: bur:Bcep18194_A5272 hypothetical protein
YP_001562026.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A5271 transcriptional regulator, LysR family
YP_001562027.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mpt:Mpe_A1047 transcriptional regulator, LysR family
YP_001562028.1	KEGG: pol:Bpro_4689 protein of unknown function DUF6, transmembrane
YP_001562029.1	TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: ajs:Ajs_3932 intracellular protease, PfpI family
YP_001562030.1	catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase
YP_001562031.1	TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: ajs:Ajs_3927 sigma 54 modulation protein/ribosomal protein S30EA
YP_001562032.1	PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: aav:Aave_4557 putative PTS IIA-like nitrogen-regulatory protein PtsN
YP_001562033.1	catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system
YP_001562034.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pen:PSEEN4326 TonB-dependent ferric siderophore receptor
YP_001562035.1	PFAM: putative esterase; KEGG: bur:Bcep18194_A5450 putative esterase
YP_001562036.1	PFAM: periplasmic binding protein; KEGG: oan:Oant_3797 periplasmic binding protein
YP_001562037.1	PFAM: transport system permease protein; KEGG: bov:BOV_A0633 iron compound ABC transporter, permease protein
YP_001562038.1	PFAM: transport system permease protein; KEGG: atc:AGR_C_4491 ferrichrome ABC transporter (permease) homolog
YP_001562039.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aau:AAur_3854 putative iron ABC transporter, ATP-binding protein
YP_001562040.1	TIGRFAM: S-adenosylmethionine--tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; KEGG: ajs:Ajs_0374 S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
YP_001562041.1	KEGG: aav:Aave_0592 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; Metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region
YP_001562042.1	catalyzes branch migration in Holliday junction intermediates
YP_001562043.1	PFAM: MHYT domain protein; KEGG: bbr:BB1820 hypothetical protein
YP_001562044.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_0377 transcriptional regulator, LysR family
YP_001562045.1	PFAM: Ferritin Dps family protein; KEGG: ajs:Ajs_0378 ferritin, Dps family protein
YP_001562046.1	PFAM: phosphoesterase PA-phosphatase related; KEGG: aav:Aave_3491 phosphoesterase, PA-phosphatase related protein
YP_001562047.1	TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; PFAM: UbiA prenyltransferase; KEGG: ajs:Ajs_0380 4-hydroxybenzoate polyprenyl transferase
YP_001562048.1	KEGG: ajs:Ajs_0381 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent
YP_001562049.1	KEGG: rpa:RPA2648 hypothetical protein
YP_001562050.1	PFAM: conserved hypothetical protein; KEGG: rme:Rmet_5038 uncharacterized protein UPF0065
YP_001562051.1	PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: reh:H16_B0313 acetolactate synthase large subunit (TPP dependent)
YP_001562052.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: reh:H16_B0314 transcriptional regulator, GntR-family
YP_001562053.1	KEGG: aav:Aave_3774 hypothetical protein
YP_001562054.1	TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: ajs:Ajs_0382 glycerol kinase
YP_001562055.1	PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: aav:Aave_0603 transcriptional regulator, DeoR family
YP_001562056.1	PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: aav:Aave_0604 ABC transporter-related protein
YP_001562057.1	PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: aav:Aave_0605 ABC transporter-related protein
YP_001562058.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_0606 binding-protein-dependent transport systems inner membrane component
YP_001562059.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_0387 binding-protein-dependent transport systems inner membrane component
YP_001562060.1	KEGG: ajs:Ajs_0388 putative integral membrane protein
YP_001562061.1	KEGG: aav:Aave_0609 extracellular solute-binding protein, family 1
YP_001562062.1	PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: aav:Aave_0610 FAD dependent oxidoreductase
YP_001562063.1	TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e; KEGG: vei:Veis_2315 ribosomal protein L14
YP_001562064.1	assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel
YP_001562065.1	part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13
YP_001562066.1	located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif
YP_001562067.1	binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
YP_001562068.1	ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance
YP_001562069.1	binds 5S rRNA along with protein L5 and L25
YP_001562070.1	located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance
YP_001562071.1	L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7
YP_001562072.1	late assembly protein
YP_001562073.1	forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase
YP_001562074.1	located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA
YP_001562075.1	located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3
YP_001562076.1	primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination
YP_001562077.1	catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme
YP_001562078.1	PFAM: ribosomal protein L17; KEGG: ajs:Ajs_0407 ribosomal protein L17
YP_001562079.1	KEGG: rso:RS02287 hypothetical protein
YP_001562080.1	TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; KEGG: rme:Rmet_4303 anion transporter
YP_001562081.1	TIGRFAM: alkylhydroperoxidase like protein, AhpD family; uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase; KEGG: bja:bll6900 hypothetical protein
YP_001562082.1	KEGG: bbt:BBta_4849 hypothetical protein
YP_001562083.1	PFAM: luciferase family protein; KEGG: bbt:BBta_4850 hypothetical protein
YP_001562084.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA0072 ABC transporter ATP-binding protein
YP_001562085.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_4852 putative ABC transporter (permease protein)
YP_001562086.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA0074 ABC transporter permease protein
YP_001562087.1	PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA0075 ABC-type transporter, substrate binding protein
YP_001562088.1	PFAM: OsmC family protein; KEGG: bur:Bcep18194_C7506 hypothetical protein
YP_001562089.1	KEGG: rpa:RPA2648 hypothetical protein
YP_001562090.1	KEGG: aav:Aave_0628 molecular chaperone, HSP70 class
YP_001562091.1	PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: aav:Aave_0629 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase
YP_001562092.1	PFAM: protein of unknown function UPF0102; KEGG: aav:Aave_0630 protein of unknown function UPF0102
YP_001562093.1	KEGG: ajs:Ajs_0415 phosphoheptose isomerase
YP_001562094.1	PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: vei:Veis_0628 transport-associated
YP_001562095.1	PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: ajs:Ajs_0417 3-hydroxyisobutyrate dehydrogenase
YP_001562096.1	TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: aav:Aave_0635 twitching motility protein
YP_001562097.1	PFAM: cyclic nucleotide-binding; KEGG: aav:Aave_0636 cyclic nucleotide-binding protein
YP_001562098.1	TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: aav:Aave_0637 twitching motility protein
YP_001562099.1	PFAM: alanine racemase domain protein; KEGG: aav:Aave_0638 alanine racemase domain protein
YP_001562100.1	PFAM: Extracellular ligand-binding receptor; KEGG: vei:Veis_1685 extracellular ligand-binding receptor
YP_001562101.1	PFAM: regulatory protein TetR; KEGG: rfr:Rfer_3897 transcriptional regulator, TetR family
YP_001562102.1	PFAM: AMP-dependent synthetase and ligase; KEGG: vei:Veis_1683 AMP-dependent synthetase and ligase
YP_001562103.1	PFAM: carboxyl transferase; biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: vei:Veis_1682 carbamoyl-phosphate synthase L chain, ATP-binding
YP_001562104.1	PFAM: aminotransferase class V; KEGG: ajs:Ajs_0422 aminotransferase, class V
YP_001562105.1	PFAM: peptidylprolyl isomerase FKBP-type; KEGG: ajs:Ajs_1935 peptidylprolyl isomerase, FKBP-type
YP_001562106.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: rfr:Rfer_0410 protein of unknown function DUF6, transmembrane
YP_001562107.1	PFAM: filamentation induced by cAMP protein Fic; KEGG: pde:Pden_3305 filamentation induced by cAMP protein Fic
YP_001562108.1	Required for the expression of anaerobic nitric oxide (NO) reductase; acts as a transcriptional activator for the norVW operon
YP_001562109.1	flavohemoprotein; catalyzes the formation of nitrate from nitric oxide; can also catalyze the reduction of dihydropteridine
YP_001562110.1	KEGG: aav:Aave_0649 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001562111.1	produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine
YP_001562112.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_0647 transcriptional regulator, LysR family
YP_001562113.1	PFAM: FAD linked oxidase domain protein; KEGG: aav:Aave_0645 FAD linked oxidase domain protein
YP_001562114.1	KEGG: cfa:482083 plectin 1, intermediate filament binding protein 500kDa
YP_001562115.1	KEGG: aav:Aave_0643 hypothetical protein
YP_001562116.1	KEGG: ajs:Ajs_2662 hypothetical protein
YP_001562117.1	TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: ajs:Ajs_1849 heavy metal efflux pump, CzcA family
YP_001562118.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mms:mma_1793 cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family
YP_001562119.1	PFAM: outer membrane efflux protein; KEGG: har:HEAR1614 cobalt-zinc-cadmium resistance protein CzcC precursor (cation efflux system protein CzcC)
YP_001562120.1	KEGG: ajs:Ajs_1846 hypothetical protein
YP_001562121.1	TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mpt:Mpe_A1629 two-component response regulator
YP_001562122.1	TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mpt:Mpe_A1630 putative two-component sensor
YP_001562124.1	PFAM: thioesterase superfamily protein; KEGG: reh:H16_A0241 uncharacterized protein, possibly involved in aromatic compounds catabolism
YP_001562125.1	PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: vei:Veis_0828 biotin/lipoyl attachment domain-containing protein
YP_001562126.1	PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: bbr:BB2689 biotin carboxylase
YP_001562127.1	PFAM: CoA-binding domain protein; KEGG: vei:Veis_0829 CoA-binding domain protein
YP_001562128.1	PFAM: conserved hypothetical protein; KEGG: rme:Rmet_4969 uncharacterized protein UPF0065
YP_001562129.1	PFAM: carboxyl transferase; KEGG: reu:Reut_B3891 propionyl-CoA carboxylase
YP_001562130.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: reu:Reut_B3890 helix-turn-helix, fis-type
YP_001562131.1	PFAM: Bile acid:sodium symporter; KEGG: dar:Daro_2614 putative efflux protein
YP_001562132.1	PFAM: protein of unknown function DUF445; KEGG: aav:Aave_0641 protein of unknown function DUF445
YP_001562133.1	KEGG: aav:Aave_0028 hypothetical protein
YP_001562134.1	KEGG: ajs:Ajs_0430 hypothetical protein
YP_001562135.1	PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: ajs:Ajs_0432 multi-sensor signal transduction histidine kinase
YP_001562136.1	PFAM: regulatory protein LuxR; response regulator receiver; Bacterio-opsin activator HTH domain protein; KEGG: ajs:Ajs_0433 two component transcriptional regulator, LuxR family
YP_001562137.1	PFAM: major facilitator superfamily MFS_1; KEGG: aav:Aave_0659 major facilitator superfamily MFS_1
YP_001562138.1	TIGRFAM: nitrite transporter; PFAM: major facilitator superfamily MFS_1; KEGG: aav:Aave_0660 nitrite transporter
YP_001562139.1	TIGRFAM: nitrate reductase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: ajs:Ajs_0436 nitrate reductase, alpha subunit
YP_001562140.1	TIGRFAM: nitrate reductase, beta subunit; KEGG: ajs:Ajs_0437 nitrate reductase, beta subunit
YP_001562141.1	TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; PFAM: Nitrate reductase delta subunit; KEGG: ajs:Ajs_0438 nitrate reductase molybdenum cofactor assembly chaperone
YP_001562142.1	KEGG: ajs:Ajs_0439 respiratory nitrate reductase, gamma subunit; TIGRFAM: respiratory nitrate reductase, gamma subunit; PFAM: Nitrate reductase gamma subunit
YP_001562143.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: ajs:Ajs_0440 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_001562144.1	PFAM: carbonic anhydrase; KEGG: ajs:Ajs_0441 carbonate dehydratase
YP_001562145.1	KEGG: ajs:Ajs_0431 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase large subunit domain protein
YP_001562146.1	PFAM: Hemerythrin HHE cation binding domain protein; KEGG: aav:Aave_0669 hemerythrin HHE cation binding domain protein
YP_001562147.1	TIGRFAM: membrane protein AbrB duplication; PFAM: putative ammonia monooxygenase; KEGG: pol:Bpro_0442 putative ammonia monooxygenase
YP_001562148.1	KEGG: reh:H16_B1196 transcriptional regulator, GlpP-family
YP_001562149.1	PFAM: FAD linked oxidase domain protein; KEGG: reh:H16_B1197 alkyldihydroxyacetonephosphate synthase
YP_001562150.1	PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_B2081 FAD dependent oxidoreductase
YP_001562151.1	PFAM: carbohydrate kinase FGGY; KEGG: rme:Rmet_5445 carbohydrate kinase, FGGY
YP_001562152.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: reh:H16_B1200 putative MFS transporter
YP_001562153.1	KEGG: vei:Veis_0989 hypothetical protein
YP_001562154.1	KEGG: ajs:Ajs_0447 hypothetical protein
YP_001562155.1	PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: aav:Aave_0741 transcriptional regulator, IclR family
YP_001562156.1	PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: aav:Aave_0742 fumarylacetoacetate (FAA) hydrolase
YP_001562157.1	PFAM: GumN family protein; KEGG: aav:Aave_0743 GumN family protein
YP_001562158.1	PFAM: conserved hypothetical protein; KEGG: aav:Aave_0744 uncharacterized protein UPF0065
YP_001562159.1	PFAM: ABC-1 domain protein; KEGG: spe:Spro_2799 ABC-1 domain protein
YP_001562160.1	PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: aav:Aave_0767 molybdopterin oxidoreductase
YP_001562161.1	PFAM: Extracellular ligand-binding receptor; KEGG: aav:Aave_0768 extracellular ligand-binding receptor
YP_001562162.1	KEGG: aav:Aave_0770 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein
YP_001562163.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: kpn:KPN_01887 putative ABC transporter substrate binding protein
YP_001562164.1	PFAM: acyl-coA-binding protein ACBP; KEGG: ajs:Ajs_0455 acyl-coA-binding protein, ACBP
YP_001562165.1	PFAM: 2OG-Fe(II) oxygenase; KEGG: aav:Aave_1085 2OG-Fe(II) oxygenase
YP_001562166.1	PFAM: NMT1/THI5 like domain protein; KEGG: aav:Aave_1084 Tat (twin-arginine translocation) pathway signal sequence domain protein
YP_001562167.1	PFAM: CMP/dCMP deaminase zinc-binding; KEGG: aav:Aave_1083 CMP/dCMP deaminase, zinc-binding
YP_001562168.1	PFAM: NMT1/THI5 like domain protein; KEGG: aav:Aave_1093 twin-arginine translocation pathway signal
YP_001562169.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_1092 ABC transporter-related protein
YP_001562170.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_1091 binding-protein-dependent transport systems inner membrane component
YP_001562171.1	PFAM: CMP/dCMP deaminase zinc-binding; KEGG: mpt:Mpe_A0774 hypothetical protein
YP_001562172.1	PFAM: sulfatase; protein of unknown function DUF1705; KEGG: ajs:Ajs_1955 sulfatase
YP_001562173.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ajs:Ajs_1953 two component transcriptional regulator, winged helix family
YP_001562174.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ajs:Ajs_1952 integral membrane sensor signal transduction histidine kinase
YP_001562175.1	KEGG: aav:Aave_0774 putative zinc protease protein
YP_001562176.1	KEGG: aav:Aave_3620 hypothetical protein
YP_001562177.1	PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: aav:Aave_0777 cyclopropane-fatty-acyl-phospholipid synthase
YP_001562178.1	PFAM: Domain of unknown function DUF1840; KEGG: aav:Aave_0778 hypothetical protein
YP_001562179.1	PFAM: aldo/keto reductase; KEGG: sil:SPOA0345 oxidoreductase, aldo/keto reductase family
YP_001562180.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: asa:ASA_1236 transcriptional regulator, LysR family
YP_001562182.1	PFAM: conserved hypothetical protein; KEGG: aav:Aave_0780 uncharacterized protein UPF0065
YP_001562183.1	KEGG: ajs:Ajs_0464 putative phenylacetate-CoA ligase
YP_001562184.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_0782 ABC transporter-related protein
YP_001562185.1	KEGG: aav:Aave_0783 hypothetical protein
YP_001562186.1	PFAM: inner-membrane translocator; KEGG: aav:Aave_0784 inner-membrane translocator
YP_001562187.1	PFAM: inner-membrane translocator; KEGG: aav:Aave_0785 inner-membrane translocator
YP_001562188.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_0469 ABC transporter related
YP_001562189.1	PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_0470 AMP-dependent synthetase and ligase
YP_001562190.1	PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: ajs:Ajs_0473 putative transcriptional regulator, Crp/Fnr family
YP_001562191.1	KEGG: rme:Rmet_1561 hypothetical protein
YP_001562192.1	PFAM: Domain of unknown function DUF1814; KEGG: rme:Rmet_1562 hypothetical protein
YP_001562193.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: vei:Veis_2499 L-carnitine dehydratase/bile acid-inducible protein F
YP_001562194.1	PFAM: conserved hypothetical protein; KEGG: rme:Rmet_5382 uncharacterized protein UPF0065
YP_001562195.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rme:Rmet_1816 acyl-CoA dehydrogenase-like protein
YP_001562196.1	PFAM: regulatory protein IclR; KEGG: reu:Reut_B3701 regulatory protein, IclR
YP_001562198.1	PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: bur:Bcep18194_A5332 pseudouridine synthase, Rsu
YP_001562199.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: xcb:XC_0556 RNA polymerase sigma factor
YP_001562200.1	PFAM: FecR protein; KEGG: xcb:XC_0557 transmembrane sensor
YP_001562201.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: pfl:PFL_3315 outer membrane ferripyoverdine receptor
YP_001562202.1	PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; KEGG: pla:Plav_0377 2OG-Fe(II) oxygenase
YP_001562203.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bxe:Bxe_B0794 TonB-dependent siderophore receptor
YP_001562204.1	TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: sme:SMc01870 probable aquaporin Z (bacterial nodulin-like intrinsic) transmembrane protein
YP_001562205.1	molecular chaperone
YP_001562206.1	TIGRFAM: conserved repeat domain protein; PFAM: protein of unknown function DUF11; KEGG: aav:Aave_4277 conserved repeat domain
YP_001562207.1	KEGG: aav:Aave_4282 hypothetical protein
YP_001562208.1	KEGG: aav:Aave_4281 hypothetical protein
YP_001562209.1	TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; KEGG: pnu:Pnuc_1190 urease accessory protein UreG
YP_001562210.1	PFAM: Urease accessory protein UreF; KEGG: reu:Reut_A0997 urease accessory protein UreF
YP_001562211.1	PFAM: UreE urease accessory domain protein; KEGG: bte:BTH_I1495 urease accessory protein UreE
YP_001562212.1	ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits
YP_001562213.1	KEGG: bxe:Bxe_A3693 urease, beta subunit; TIGRFAM: urease, beta subunit; PFAM: Urease beta subunit
YP_001562214.1	PFAM: HupE/UreJ protein; KEGG: pna:Pnap_0976 HupE/UreJ protein
YP_001562215.1	KEGG: reh:H16_A1081 UreA amidohydrolase (urease) gamma subunit; TIGRFAM: urease, gamma subunit; PFAM: Urease gamma subunit region
YP_001562216.1	PFAM: Urease accessory protein UreD; KEGG: reh:H16_A1080 UreA amidohydrolase (urease) accessory protein UreD
YP_001562217.1	PFAM: major facilitator superfamily MFS_1; KEGG: aav:Aave_2274 major facilitator superfamily MFS_1
YP_001562218.1	PFAM: Endoribonuclease L-PSP; KEGG: reh:H16_B2318 ribonuclease
YP_001562219.1	TIGRFAM: redox-sensitive transcriptional activator SoxR; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: reh:H16_B2319 transcriptional regulator, SoxR-family
YP_001562220.1	PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_2346 major facilitator superfamily MFS_1
YP_001562221.1	KEGG: ajs:Ajs_2291 hypothetical protein
YP_001562222.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: ppd:Ppro_1341 response regulator receiver modulated diguanylate cyclase
YP_001562223.1	catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages
YP_001562224.1	KEGG: azo:azo0068 hypothetical protein
YP_001562225.1	PFAM: OsmC family protein; KEGG: aav:Aave_4272 OsmC family protein
YP_001562226.1	PFAM: regulatory protein MarR; KEGG: ajs:Ajs_0483 transcriptional regulator, MarR family
YP_001562227.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pae:PA2841 probable enoyl-CoA hydratase/isomerase
YP_001562228.1	converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA
YP_001562229.1	PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: ajs:Ajs_3717 glucose-methanol-choline oxidoreductase
YP_001562230.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: aav:Aave_4247 diguanylate cyclase
YP_001562231.1	Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile
YP_001562232.1	KEGG: ajs:Ajs_3708 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001562233.1	PFAM: protein of unknown function DUF336; KEGG: pol:Bpro_4102 protein of unknown function DUF336
YP_001562234.1	PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: pol:Bpro_4101 two component transcriptional regulator, LuxR family
YP_001562235.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pol:Bpro_4100 periplasmic sensor signal transduction histidine kinase
YP_001562236.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: ajs:Ajs_3707 cation diffusion facilitator family transporter
YP_001562237.1	hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine
YP_001562238.1	KEGG: rme:Rmet_4890 peptidase M20A, peptidase V; TIGRFAM: dipeptidase,; PFAM: peptidase M20; peptidase dimerisation domain protein
YP_001562239.1	TIGRFAM: CRISPR-associated protein Cas1; KEGG: ajs:Ajs_0489 CRISPR-associated protein Cas1
YP_001562240.1	TIGRFAM: addiction module antidote protein, HigA family; KEGG: dno:DNO_0272 virulence-associated protein VapI
YP_001562241.1	PFAM: plasmid maintenance system killer; KEGG: ppf:Pput_4191 plasmid maintenance system killer
YP_001562242.1	TIGRFAM: CRISPR-associated protein, Csy1 family; PFAM: CRISPR-associated protein Csy1; KEGG: vei:Veis_1458 CRISPR-associated protein, Csy1 family
YP_001562243.1	TIGRFAM: CRISPR-associated protein, Csy2 family; PFAM: CRISPR-associated protein Csy2; KEGG: ajs:Ajs_0486 CRISPR-associated protein, Csy2 family
YP_001562244.1	TIGRFAM: CRISPR-associated protein, Csy3 family; PFAM: CRISPR-associated protein Csy3; KEGG: vei:Veis_1456 CRISPR-associated protein, Csy3 family
YP_001562245.1	TIGRFAM: CRISPR-associated protein, Csy4 family; PFAM: CRISPR-associated protein Csy4; KEGG: ajs:Ajs_0484 CRISPR-associated protein, Csy4 family
YP_001562248.1	PFAM: protein of unknown function DUF81; KEGG: ajs:Ajs_3704 protein of unknown function DUF81
YP_001562249.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: vei:Veis_0434 transcriptional regulator, LysR family
YP_001562250.1	PFAM: conserved hypothetical protein; KEGG: vei:Veis_0435 uncharacterized protein UPF0065
YP_001562251.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: vei:Veis_0218 L-carnitine dehydratase/bile acid-inducible protein F
YP_001562252.1	TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pna:Pnap_1210 alcohol dehydrogenase GroES domain protein
YP_001562253.1	PFAM: protein of unknown function UPF0054; KEGG: ajs:Ajs_3702 protein of unknown function UPF0054
YP_001562254.1	PFAM: PhoH family protein; KEGG: aav:Aave_4241 PhoH family protein
YP_001562255.1	KEGG: ajs:Ajs_3700 Holliday junction DNA helicase RuvA; TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: RuvA domain protein; DNA recombination protein RuvA domain I; SMART: Helix-hairpin-helix DNA-binding class 1
YP_001562256.1	promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration
YP_001562257.1	PFAM: MgtC/SapB transporter; KEGG: aav:Aave_0651 MgtC/SapB transporter
YP_001562258.1	P-type ATPase involved in magnesium influx
YP_001562261.1	PFAM: fatty acid hydroxylase; YhhN family protein; KEGG: ajs:Ajs_3693 YhhN family protein
YP_001562262.1	PFAM: conserved hypothetical protein; KEGG: vei:Veis_2519 uncharacterized protein UPF0065
YP_001562263.1	KEGG: rme:Rmet_5702 hypothetical protein
YP_001562264.1	KEGG: rme:Rmet_5701 hypothetical protein
YP_001562265.1	KEGG: rme:Rmet_5700 hypothetical protein
YP_001562266.1	KEGG: rme:Rmet_5699 hypothetical protein
YP_001562267.1	PFAM: Phosphoglycerate mutase; KEGG: ajs:Ajs_0491 phosphoglycerate mutase
YP_001562268.1	KEGG: ajs:Ajs_0492 hypothetical protein
YP_001562269.1	PFAM: extracellular solute-binding protein family 5; KEGG: sit:TM1040_3144 extracellular solute-binding protein, family 5
YP_001562270.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sit:TM1040_3142 binding-protein-dependent transport systems inner membrane component
YP_001562271.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rde:RD1_2223 peptide ABC transporter, permease protein, putative
YP_001562272.1	PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: bbr:BB4911 probable ABC transporter, ATP-binding protein
YP_001562273.1	KEGG: pna:Pnap_0085 putative transcriptional regulator
YP_001562274.1	TIGRFAM: addiction module killer protein; PFAM: protein of unknown function DUF891; KEGG: pna:Pnap_0084 protein of unknown function DUF891
YP_001562275.1	KEGG: aav:Aave_4232 hypothetical protein
YP_001562276.1	TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs
YP_001562277.1	PFAM: fatty acid hydroxylase; KEGG: ana:all2658 hypothetical protein
YP_001562278.1	PFAM: dihydroneopterin aldolase; KEGG: ajs:Ajs_0495 dihydroneopterin aldolase
YP_001562279.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ajs:Ajs_0496 short-chain dehydrogenase/reductase SDR
YP_001562280.1	PFAM: protein of unknown function DUF185; KEGG: ajs:Ajs_0497 protein of unknown function DUF185
YP_001562281.1	KEGG: azo:azo3831 conserved hypothetical secreted protein
YP_001562282.1	KEGG: ajs:Ajs_0499 hypothetical protein
YP_001562283.1	TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: ajs:Ajs_0504 thioredoxin
YP_001562284.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mms:mma_2821 two-components system response regulator
YP_001562285.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Diverse 7TM receptor extracellular region 2; KEGG: bur:Bcep18194_B1562 periplasmic sensor signal transduction histidine kinase
YP_001562286.1	PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; KEGG: ajs:Ajs_0505 metal dependent phosphohydrolase
YP_001562287.1	PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: eca:ECA1988 putative peptidase
YP_001562288.1	PFAM: Glutathione S-transferase domain; KEGG: ajs:Ajs_0507 glutathione S-transferase, N-terminal domain
YP_001562289.1	TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: pna:Pnap_0636 ExsB protein
YP_001562290.1	PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: vei:Veis_1472 5-formyltetrahydrofolate cyclo-ligase
YP_001562291.1	PFAM: Lytic transglycosylase catalytic; KEGG: aav:Aave_4203 lytic transglycosylase, catalytic
YP_001562292.1	KEGG: hch:HCH_06720 hypothetical protein
YP_001562293.1	PFAM: beta-lactamase domain protein; KEGG: aav:Aave_4202 beta-lactamase domain protein
YP_001562294.1	PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_0516 AMP-dependent synthetase and ligase
YP_001562295.1	KEGG: ajs:Ajs_0517 PGAP1 family protein
YP_001562296.1	phenylalanine 4-hydroxylase; phenylalanine 4-hydroxylase; catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin
YP_001562297.1	PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0519 uncharacterized protein UPF0065
YP_001562298.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: aav:Aave_4188 transcriptional regulator, AsnC family
YP_001562299.1	PFAM: GCN5-related N-acetyltransferase; KEGG: ajs:Ajs_0522 GCN5-related N-acetyltransferase
YP_001562300.1	PFAM: CBS domain containing protein; transporter-associated region; KEGG: pol:Bpro_4209 CBS domain
YP_001562301.1	TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: ajs:Ajs_0524 apolipoprotein N-acyltransferase
YP_001562302.1	catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP
YP_001562303.1	PFAM: Beta-ketoacyl synthase; KEGG: ajs:Ajs_0526 beta-ketoacyl synthase
YP_001562304.1	TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: ajs:Ajs_0537 dTDP-glucose 4,6-dehydratase
YP_001562305.1	PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: pol:Bpro_4021 dTDP-4-dehydrorhamnose reductase
YP_001562306.1	TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: pol:Bpro_4018 glucose-1-phosphate thymidylyltransferase
YP_001562307.1	KEGG: ajs:Ajs_0540 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related
YP_001562308.1	TIGRFAM: aminoethylphosphonate catabolism associated LysR family transcriptional regulator; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reu:Reut_B5518 regulatory protein, LysR:LysR, substrate-binding
YP_001562309.1	PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: pol:Bpro_3578 permease for cytosine/purines, uracil, thiamine, allantoin
YP_001562310.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pol:Bpro_1419 transcriptional regulator, GntR family
YP_001562311.1	TIGRFAM: 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component; PFAM: extracellular solute-binding protein family 1; KEGG: reh:H16_B0111 ABC-type transporter, periplasmic component: BIT family
YP_001562312.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: smd:Smed_4878 ABC transporter related
YP_001562313.1	TIGRFAM: 2-aminoethylphosphonate ABC transport system, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hch:HCH_03086 ABC-type Fe3+ transport system, permease component
YP_001562314.1	TIGRFAM: FAD dependent oxidoreductase TIGR03364; PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_C6735 FAD dependent oxidoreductase
YP_001562315.1	KEGG: aba:Acid345_4150 hypothetical protein
YP_001562316.1	TIGRFAM: DNA binding domain protein, excisionase family; KEGG: tfu:Tfu_2818 hypothetical protein
YP_001562317.1	glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA
YP_001562318.1	KEGG: aav:Aave_4177 glycine--tRNA ligase; TIGRFAM: glycyl-tRNA synthetase, beta subunit
YP_001562319.1	TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: vei:Veis_2164 histidinol-phosphate phosphatase family protein
YP_001562320.1	PFAM: phospholipid/glycerol acyltransferase; KEGG: aav:Aave_4174 phospholipid/glycerol acyltransferase
YP_001562321.1	PFAM: protein of unknown function DUF45; KEGG: aav:Aave_4173 protein of unknown function DUF45
YP_001562322.1	SMART: Rhodanese domain protein; KEGG: vei:Veis_2167 rhodanese domain protein
YP_001562323.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reu:Reut_A2109 regulatory protein, LysR:LysR, substrate-binding
YP_001562324.1	PFAM: conserved hypothetical protein; KEGG: pol:Bpro_2118 uncharacterized protein UPF0065
YP_001562325.1	PFAM: Asp/Glu/hydantoin racemase; KEGG: vei:Veis_4205 Asp/Glu racemase
YP_001562326.1	PFAM: Peptidoglycan-binding LysM; transport-associated; KEGG: ajs:Ajs_0533 peptidoglycan-binding LysM
YP_001562327.1	type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP
YP_001562328.1	KEGG: aav:Aave_4160 general secretory pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase
YP_001562329.1	PFAM: type II secretion system protein; KEGG: aav:Aave_4159 type II secretion system protein
YP_001562330.1	TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: aav:Aave_4158 general secretion pathway protein G
YP_001562331.1	TIGRFAM: general secretion pathway protein H; KEGG: vei:Veis_0685 general secretion pathway protein H
YP_001562332.1	KEGG: vei:Veis_0684 general secretion pathway protein I
YP_001562333.1	KEGG: aav:Aave_4155 general secretion pathway protein J
YP_001562334.1	KEGG: vei:Veis_0682 general secretory pathway protein K
YP_001562335.1	PFAM: Fimbrial assembly family protein; KEGG: aav:Aave_4153 fimbrial assembly family protein
YP_001562336.1	KEGG: aav:Aave_4152 general secretion pathway protein M
YP_001562337.1	KEGG: aav:Aave_4151 hypothetical protein
YP_001562338.1	TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: aav:Aave_4150 general secretion pathway protein D
YP_001562339.1	KEGG: vei:Veis_0677 hypothetical protein
YP_001562340.1	KEGG: aav:Aave_4148 hypothetical protein
YP_001562341.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: aav:Aave_4147 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_001562342.1	PFAM: ABC-2 type transporter; KEGG: aav:Aave_4146 ABC-2 type transporter
YP_001562343.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_4145 ABC transporter-related protein
YP_001562344.1	KEGG: aav:Aave_4144 hypothetical protein
YP_001562345.1	PFAM: Methyltransferase type 12; KEGG: aav:Aave_4143 methyltransferase type 12
YP_001562346.1	KEGG: efa:EF2179 hypothetical protein
YP_001562347.1	PFAM: glycosyl transferase family 2; methyltransferase small; Methionine biosynthesis MetW protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: aav:Aave_4142 glycosyl transferase, family 2
YP_001562348.1	KEGG: vei:Veis_1228 glycosyl transferase, family 2
YP_001562349.1	PFAM: glycosyl transferase family 4; KEGG: vei:Veis_1227 glycosyl transferase, family 4
YP_001562350.1	catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate
YP_001562351.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: aav:Aave_4138 two component transcriptional regulator, winged helix family
YP_001562352.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: aav:Aave_4137 integral membrane sensor signal transduction histidine kinase
YP_001562353.1	FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly
YP_001562354.1	KEGG: aav:Aave_4135 hypothetical protein
YP_001562355.1	PFAM: peptidase S24 and S26 domain protein; KEGG: ppd:Ppro_0272 putative phage repressor
YP_001562356.1	KEGG: aav:Aave_4101 hypothetical protein
YP_001562357.1	KEGG: rsq:Rsph17025_2092 hypothetical protein
YP_001562359.1	PFAM: Protein of unknown function DUF1799 phage-related; KEGG: pap:PSPA7_2416 phage protein
YP_001562360.1	KEGG: aav:Aave_1628 prophage tail length tape measure
YP_001562361.1	KEGG: aav:Aave_1629 carbohydrate-binding family V/XII
YP_001562362.1	KEGG: sit:TM1040_1609 hypothetical protein
YP_001562365.1	PFAM: regulatory protein TetR; KEGG: ajs:Ajs_0591 transcriptional regulator, TetR family
YP_001562366.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: aav:Aave_4089 acyl-CoA dehydrogenase domain protein
YP_001562367.1	KEGG: ajs:Ajs_0593 hypothetical protein
YP_001562368.1	PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: ajs:Ajs_0594 3-hydroxyacyl-CoA dehydrogenase, NAD-binding
YP_001562369.1	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation
YP_001562370.1	KEGG: ajs:Ajs_0596 putative hydrolase
YP_001562371.1	KEGG: vei:Veis_1900 hypothetical protein
YP_001562372.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
YP_001562373.1	PFAM: thioesterase superfamily protein; KEGG: ajs:Ajs_0599 uncharacterized domain 1
YP_001562374.1	PFAM: multi antimicrobial extrusion protein MatE; KEGG: rpb:RPB_1675 MATE efflux family protein
YP_001562375.1	PFAM: regulatory protein MarR; KEGG: mca:MCA2812 transcriptional regulator, MarR family
YP_001562376.1	PFAM: protein of unknown function DUF583; KEGG: ajs:Ajs_0600 protein of unknown function DUF583
YP_001562377.1	PFAM: thioesterase superfamily protein; KEGG: aav:Aave_4080 thioesterase superfamily protein
YP_001562378.1	PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rfr:Rfer_3493 ABC transporter related
YP_001562379.1	PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: bbr:BB3096 putative peptidase
YP_001562380.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pna:Pnap_2731 transcriptional regulator, GntR family
YP_001562381.1	PFAM: Rieske [2Fe-2S] domain protein; KEGG: pna:Pnap_2725 Rieske (2Fe-2S) domain protein
YP_001562382.1	PFAM: regulatory protein MarR; KEGG: rfr:Rfer_0279 transcriptional regulator, MarR family
YP_001562383.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: ppu:PP_3740 major facilitator family transporter
YP_001562384.1	PFAM: Rieske [2Fe-2S] domain protein; KEGG: bam:Bamb_4593 Rieske (2Fe-2S) domain protein
YP_001562385.1	PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: rfr:Rfer_0281 ferredoxin
YP_001562386.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: rme:Rmet_5796 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
YP_001562387.1	KEGG: xcb:XC_0350 hypothetical protein
YP_001562388.1	PFAM: regulatory protein TetR; KEGG: aav:Aave_3134 transcriptional regulator, TetR family
YP_001562389.1	TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: ajs:Ajs_0604 TRAP dicarboxylate transporter, DctP subunit
YP_001562390.1	TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: ajs:Ajs_0605 TRAP dicarboxylate transporter, DctM subunit
YP_001562391.1	PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: aav:Aave_4076 tripartite ATP-independent periplasmic transporter, DctQ component
YP_001562392.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_0607 transcriptional regulator, LysR family
YP_001562393.1	PFAM: extracellular solute-binding protein family 3; KEGG: ajs:Ajs_0609 extracellular solute-binding protein, family 3
YP_001562394.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_0610 polar amino acid ABC transporter, inner membrane subunit
YP_001562395.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_0611 polar amino acid ABC transporter, inner membrane subunit
YP_001562396.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_0612 ABC transporter related
YP_001562397.1	PFAM: sugar isomerase (SIS); KEGG: aav:Aave_1915 transcriptional regulator, RpiR family
YP_001562398.1	PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: aav:Aave_1914 peptidase M20
YP_001562399.1	PFAM: conserved hypothetical protein; KEGG: aav:Aave_1913 uncharacterized protein UPF0065
YP_001562400.1	PFAM: conserved hypothetical protein; KEGG: aav:Aave_1913 uncharacterized protein UPF0065
YP_001562401.1	PFAM: conserved hypothetical protein; KEGG: rme:Rmet_5161 uncharacterized protein UPF0065
YP_001562402.1	PFAM: beta-lactamase domain protein; KEGG: reu:Reut_B3706 beta-lactamase-like
YP_001562403.1	PFAM: protein of unknown function DUF1214; protein of unknown function DUF1254; KEGG: reu:Reut_B3898 protein of unknown function DUF1214:protein of unknown function DUF1254
YP_001562404.1	PFAM: protein of unknown function DUF1214; protein of unknown function DUF1254; KEGG: reu:Reut_B3704 protein of unknown function DUF1214:protein of unknown function DUF1254
YP_001562405.1	PFAM: conserved hypothetical protein; KEGG: rme:Rmet_3913 uncharacterized protein UPF0065
YP_001562406.1	PFAM: CoA-binding domain protein; KEGG: rme:Rmet_3916 CoA-binding
YP_001562407.1	PFAM: porin Gram-negative type; KEGG: reu:Reut_B3712 porin, gram-negative type
YP_001562408.1	PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: abo:ABO_1600 transcriptional regulator Anr
YP_001562409.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: psb:Psyr_3111 regulatory protein, LysR:LysR, substrate-binding
YP_001562410.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: vei:Veis_2905 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
YP_001562411.1	PFAM: Dimethylmenaquinone methyltransferase; KEGG: smd:Smed_5904 dimethylmenaquinone methyltransferase
YP_001562412.1	PFAM: conserved hypothetical protein; KEGG: vei:Veis_2904 uncharacterized protein UPF0065
YP_001562413.1	PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: bte:BTH_II0813 dehydrogenase, FMN-dependent family
YP_001562414.1	catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis
YP_001562415.1	PFAM: protein of unknown function DUF88; KEGG: aav:Aave_4318 protein of unknown function DUF88
YP_001562416.1	KEGG: aav:Aave_4317 putative transmembrane protein
YP_001562417.1	putative metalloprotease
YP_001562418.1	TIGRFAM: prevent-host-death family protein; KEGG: nwi:Nwi_0856 prevent-host-death protein
YP_001562419.1	PFAM: PilT protein domain protein; KEGG: gox:GOX2554 plasmid stability-like protein
YP_001562420.1	KEGG: ajs:Ajs_3741 hypothetical protein
YP_001562421.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_3740 transcriptional regulator, LysR family
YP_001562422.1	PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: ajs:Ajs_3739 3-hydroxyacyl-CoA dehydrogenase, NAD-binding
YP_001562423.1	KEGG: ajs:Ajs_3738 acetyl-CoA acetyltransferases; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase
YP_001562424.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: aav:Aave_4313 acyl-CoA dehydrogenase domain protein
YP_001562425.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_3736 acyl-CoA dehydrogenase domain protein
YP_001562426.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
YP_001562427.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: ajs:Ajs_3734 L-carnitine dehydratase/bile acid-inducible protein F
YP_001562428.1	PFAM: conserved hypothetical protein; KEGG: aav:Aave_4309 uncharacterized protein UPF0065
YP_001562429.1	PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_3733 uncharacterized protein UPF0065
YP_001562430.1	PFAM: 2-nitropropane dioxygenase NPD; KEGG: ajs:Ajs_3732 2-nitropropane dioxygenase, NPD
YP_001562431.1	PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: ajs:Ajs_3731 electron transfer flavoprotein beta-subunit
YP_001562432.1	PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: ajs:Ajs_2809 electron transfer flavoprotein, alpha subunit
YP_001562433.1	PFAM: conserved hypothetical protein; KEGG: reh:H16_A1555 probable extra-cytoplasmic solute receptor
YP_001562434.1	PFAM: AMP-dependent synthetase and ligase; KEGG: reh:H16_A2076 long-chain-fatty-acid--CoA ligase
YP_001562435.1	PFAM: class II aldolase/adducin family protein; KEGG: aav:Aave_4305 class II aldolase/adducin family protein
YP_001562436.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: reh:H16_B0841 D-3-phosphoglycerate dehydrogenase
YP_001562437.1	PFAM: conserved hypothetical protein; KEGG: aav:Aave_4304 uncharacterized protein UPF0065
YP_001562438.1	KEGG: ppf:Pput_3520 integrase, catalytic region
YP_001562439.1	PFAM: transposase IS3/IS911 family protein; KEGG: pna:Pnap_4532 transposase IS3/IS911 family protein
YP_001562440.1	PFAM: IS66 Orf2 family protein; KEGG: reu:Reut_C6378 IS66 Orf2 like
YP_001562441.1	PFAM: transposase IS66; KEGG: pna:Pnap_2521 transposase IS66
YP_001562442.1	TIGRFAM: yecA family protein; PFAM: SEC-C motif domain protein; KEGG: bvi:Bcep1808_2979 YecA family protein
YP_001562443.1	KEGG: pen:PSEEN4950 transposase
YP_001562445.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: rme:Rmet_4871 transcriptional regulator, AraC family
YP_001562446.1	KEGG: reh:H16_A1453 putative peptidase, M20D subfamily; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein
YP_001562447.1	TIGRFAM: conserved hypothetical integral membrane protein; PFAM: protein of unknown function DUF165; KEGG: xcb:XC_0564 hypothetical protein
YP_001562448.1	PFAM: FAD dependent oxidoreductase; KEGG: ajs:Ajs_3727 FAD dependent oxidoreductase
YP_001562449.1	TIGRFAM: filamentous haemagglutinin family outer membrane protein; adhesin HecA family; PFAM: filamentous haemagglutinin domain protein; KEGG: bam:Bamb_5443 filamentous haemagglutinin family outer membrane protein
YP_001562450.1	PFAM: Hemolysin activator HlyB domain protein; Polypeptide-transport-associated domain protein ShlB-type; KEGG: reu:Reut_A2932 hemolysin activator HlyB
YP_001562451.1	KEGG: ade:Adeh_0244 LigA
YP_001562452.1	KEGG: rci:RRC32 hypothetical protein
YP_001562453.1	TIGRFAM: adhesin HecA family; PFAM: Haemagluttinin repeat-containing protein; KEGG: bpl:BURPS1106A_1129 cell surface protein
YP_001562456.1	KEGG: bam:Bamb_5427 hypothetical protein
YP_001562457.1	KEGG: rso:RS03931 probable transmembrane protein
YP_001562458.1	KEGG: bam:Bamb_3781 hypothetical protein
YP_001562461.1	KEGG: reu:Reut_A2925 hypothetical protein
YP_001562462.1	PFAM: Heat shock protein 70; KEGG: rso:RSp0521 probable chaperone transmembrane protein
YP_001562463.1	PFAM: heat shock protein DnaJ domain protein; KEGG: rso:RS00401 hypothetical protein
YP_001562464.1	KEGG: aav:Aave_3307 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase
YP_001562465.1	PFAM: conserved hypothetical protein; KEGG: rme:Rmet_1719 uncharacterized protein UPF0065
YP_001562466.1	class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle
YP_001562467.1	PFAM: conserved hypothetical protein; KEGG: vei:Veis_4597 uncharacterized protein UPF0065
YP_001562468.1	TIGRFAM: 3-carboxy-cis,cis-muconate cycloisomerase; PFAM: fumarate lyase; KEGG: vei:Veis_4598 fumarate lyase
YP_001562469.1	PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: vei:Veis_4599 transcriptional regulator, fis family
YP_001562470.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_2089 ABC transporter related
YP_001562471.1	TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: aav:Aave_4297 cysteine synthase A
YP_001562472.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_4170 transcriptional regulator, LysR family
YP_001562473.1	catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia
YP_001562474.1	KEGG: bbr:BB2999 hypothetical protein
YP_001562475.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: rme:Rmet_1926 major facilitator superfamily MFS_1
YP_001562476.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: pen:PSEEN4902 hypothetical protein
YP_001562477.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: pau:PA14_55730 putative transcriptional regulator, AraC family
YP_001562478.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: psp:PSPPH_1870 outer membrane ferripyoverdine receptor
YP_001562479.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: FecR protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: pen:PSEEN1038 FecR-like transmembrane sensor
YP_001562480.1	PFAM: RNA-binding S4 domain protein; KEGG: aav:Aave_0792 RNA-binding S4 domain protein
YP_001562481.1	PFAM: NUDIX hydrolase; beta-lactamase domain protein; KEGG: aav:Aave_0793 beta-lactamase domain protein
YP_001562482.1	involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate
YP_001562483.1	PFAM: protein of unknown function DUF484; KEGG: ajs:Ajs_3687 protein of unknown function DUF484
YP_001562484.1	PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: aav:Aave_0801 phage integrase family protein
YP_001562485.1	PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: ajs:Ajs_3684 cobalamin synthesis protein, P47K
YP_001562486.1	TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: ajs:Ajs_3683 transcriptional regulator, TraR/DksA family
YP_001562487.1	KEGG: vei:Veis_4558 hypothetical protein
YP_001562488.1	heat shock protein involved in degradation of misfolded proteins
YP_001562489.1	heat shock protein involved in degradation of misfolded proteins
YP_001562490.1	MraZ; UPF0040; crystal structure shows similarity to AbrB
YP_001562491.1	TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: aav:Aave_0813 S-adenosyl-methyltransferase MraW
YP_001562492.1	PFAM: cell division protein FtsL; KEGG: ajs:Ajs_3677 cell division protein FtsL
YP_001562493.1	PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: ajs:Ajs_3676 peptidoglycan glycosyltransferase
YP_001562494.1	involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate
YP_001562495.1	TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: ajs:Ajs_3674 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase
YP_001562496.1	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
YP_001562497.1	TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: aav:Aave_0819 UDP-N-acetylmuramoylalanine--D-glutamate ligase
YP_001562498.1	TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: ajs:Ajs_3671 cell division protein FtsW
YP_001562499.1	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis
YP_001562500.1	Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis
YP_001562501.1	D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli
YP_001562502.1	PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein FtsQ-type; KEGG: vei:Veis_4573 polypeptide-transport-associated domain protein, FtsQ-type
YP_001562503.1	PFAM: cell division protein FtsA; KEGG: ajs:Ajs_3666 cell division protein FtsA
YP_001562504.1	TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ domain protein; KEGG: aav:Aave_0826 cell division protein FtsZ
YP_001562505.1	zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis
YP_001562506.1	KEGG: pol:Bpro_1082 hypothetical protein
YP_001562507.1	KEGG: mca:MCA0115 oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_001562508.1	PFAM: alpha/beta hydrolase fold; KEGG: pcr:Pcryo_2203 alpha/beta hydrolase fold
YP_001562509.1	endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity
YP_001562510.1	TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: glycosyl transferase family 51; KEGG: aav:Aave_0840 monofunctional biosynthetic peptidoglycan transglycosylase
YP_001562511.1	AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate
YP_001562512.1	TIGRFAM: TonB family protein; KEGG: ajs:Ajs_3655 TonB family protein
YP_001562513.1	PFAM: ribonuclease II; KEGG: aav:Aave_0843 ribonuclease II
YP_001562514.1	PFAM: protein of unknown function UPF0227; KEGG: ajs:Ajs_3649 protein of unknown function UPF0227
YP_001562515.1	TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: ajs:Ajs_3647 rod shape-determining protein RodA
YP_001562516.1	PFAM: peptidase U62 modulator of DNA gyrase; KEGG: ajs:Ajs_3646 peptidase U62, modulator of DNA gyrase
YP_001562517.1	catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive
YP_001562518.1	PFAM: protein of unknown function DUF446; KEGG: shm:Shewmr7_2718 protein of unknown function DUF446
YP_001562519.1	KEGG: aav:Aave_0853 hypothetical protein
YP_001562520.1	TIGRFAM: UDP-N-acetylmuramate; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: aav:Aave_0854 UDP-N-acetylmuramate
YP_001562521.1	KEGG: aav:Aave_0855 hypothetical protein
YP_001562522.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: aav:Aave_0856 redoxin domain protein
YP_001562523.1	TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: ajs:Ajs_3639 acetyl-CoA carboxylase, biotin carboxyl carrier protein
YP_001562524.1	TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: ajs:Ajs_3638 acetyl-CoA carboxylase, biotin carboxylase
YP_001562525.1	methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype
YP_001562526.1	TIGRFAM: MJ0042 family finger-like protein; KEGG: aav:Aave_0860 MJ0042 family finger-like protein
YP_001562527.1	PFAM: PfkB domain protein; KEGG: ajs:Ajs_3635 PfkB domain protein
YP_001562528.1	KEGG: aav:Aave_0862 histone protein
YP_001562529.1	Catalyzes the rate-limiting step in dNTP synthesis
YP_001562530.1	Catalyzes the rate-limiting step in dNTP synthesis
YP_001562531.1	PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: aav:Aave_0865 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
YP_001562532.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: aav:Aave_0866 two component, sigma54 specific, transcriptional regulator, fis family
YP_001562533.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: aav:Aave_0867 integral membrane sensor signal transduction histidine kinase
YP_001562534.1	KEGG: ajs:Ajs_3628 hypothetical protein
YP_001562535.1	PFAM: cytochrome c assembly protein; KEGG: ajs:Ajs_3627 cytochrome c assembly protein
YP_001562536.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: azo:azo2403 probable two-component response regulator
YP_001562537.1	KEGG: mgm:Mmc1_3409 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001562538.1	KEGG: ajs:Ajs_3626 signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase
YP_001562539.1	PFAM: NLP/P60 protein; KEGG: rme:Rmet_1972 NLP/P60
YP_001562540.1	KEGG: csa:Csal_0802 hypothetical protein
YP_001562541.1	KEGG: pfl:PFL_4494 hypothetical protein
YP_001562542.1	KEGG: pfl:PFL_4493 hypothetical protein
YP_001562543.1	KEGG: pfl:PFL_4492 hypothetical protein
YP_001562544.1	catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A)
YP_001562545.1	KEGG: aav:Aave_0876 hypothetical protein
YP_001562546.1	TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: aav:Aave_3826 formate dehydrogenase family accessory protein FdhD
YP_001562547.1	KEGG: ajs:Ajs_3126 molybdate ABC transporter, ATPase subunit; TIGRFAM: molybdate ABC transporter, ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase
YP_001562548.1	TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_3125 molybdate ABC transporter, inner membrane subunit
YP_001562549.1	TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: ajs:Ajs_3124 molybdenum ABC transporter, periplasmic molybdate-binding protein
YP_001562550.1	PFAM: regulatory protein LysR; TOBE domain protein; KEGG: aav:Aave_2030 putative transcriptional regulator, ModE family
YP_001562552.1	KEGG: aav:Aave_1558 hypothetical protein
YP_001562553.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: hiq:CGSHiGG_09170 transporter protein
YP_001562554.1	KEGG: aav:Aave_1925 putative iron-regulated protein
YP_001562555.1	PFAM: protein of unknown function DUF1111; KEGG: pna:Pnap_2562 protein of unknown function DUF1111
YP_001562556.1	KEGG: aav:Aave_1923 periplasmic lipoprotein-like protein
YP_001562557.1	PFAM: conserved hypothetical protein; KEGG: mpt:Mpe_A1461 hypothetical protein
YP_001562558.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ajs:Ajs_3623 enoyl-CoA hydratase/isomerase
YP_001562559.1	PFAM: peptidase M61 domain protein; KEGG: ajs:Ajs_3622 peptidase M61 domain protein
YP_001562560.1	KEGG: ajs:Ajs_3621 thiol:disulfide interchange protein DsbC
YP_001562561.1	TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; KEGG: ajs:Ajs_3620 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family
YP_001562562.1	PFAM: MOSC domain containing protein; MOSC domain protein beta barrel domain protein; KEGG: aav:Aave_0886 MOSC domain protein beta barrel domain protein
YP_001562563.1	TIGRFAM: GTP-binding protein YchF; PFAM: GTP-binding protein HSR1-related; Protein of unknown function DUF933; KEGG: ajs:Ajs_3618 GTP-binding protein YchF
YP_001562564.1	PFAM: protein of unknown function DUF1044; KEGG: plu:plu2130 hypothetical protein
YP_001562565.1	KEGG: plu:plu2131 putative transcriptional regulator
YP_001562566.1	KEGG: bpu:BPUM_2653 hypothetical protein
YP_001562568.1	PFAM: protein of unknown function DUF1016; KEGG: gur:Gura_1011 protein of unknown function DUF1016
YP_001562569.1	KEGG: bbr:BB4287 hypothetical protein
YP_001562570.1	catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide
YP_001562571.1	PFAM: conserved hypothetical protein; KEGG: bbr:BB4285 hypothetical protein
YP_001562572.1	catalyzes the formation of acetoacetate from 3-hydroxybutyrate
YP_001562573.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pna:Pnap_1024 transcriptional regulator, LysR family
YP_001562574.1	catalyzes the formation of benzaldehyde from benzoylformate
YP_001562575.1	KEGG: azo:azo2471 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein
YP_001562576.1	PFAM: conserved hypothetical protein; KEGG: pol:Bpro_4537 uncharacterized protein UPF0065
YP_001562577.1	PFAM: conserved hypothetical protein; KEGG: pna:Pnap_1019 uncharacterized protein UPF0065
YP_001562578.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: xac:XAC2145 cation efflux system protein
YP_001562579.1	TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: xcv:XCV2107 RND superfamily protein
YP_001562580.1	PFAM: outer membrane efflux protein; KEGG: bth:BT_4695 outer membrane efflux protein precursor
YP_001562581.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: xom:XOO_2258 nodulation protein
YP_001562582.1	PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: xcv:XCV2104 two-component system response regulator
YP_001562583.1	PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: aav:Aave_0762 protein of unknown function DUF894, DitE
YP_001562584.1	PFAM: DoxX family protein; KEGG: cko:CKO_00429 hypothetical protein
YP_001562585.1	PFAM: Amidohydrolase 3; KEGG: cko:CKO_00430 hypothetical protein
YP_001562586.1	PFAM: protein of unknown function DUF1427; KEGG: pau:PA14_29250 hypothetical protein
YP_001562587.1	PFAM: isochorismatase hydrolase; KEGG: smd:Smed_4075 isochorismatase hydrolase
YP_001562588.1	PFAM: Pirin domain protein; KEGG: cvi:CV_1283 hypothetical protein
YP_001562589.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: cvi:CV_1282 probable transcriptional regulator
YP_001562590.1	KEGG: ajs:Ajs_3587 hypothetical protein
YP_001562591.1	KEGG: vei:Veis_3028 hypothetical protein
YP_001562592.1	TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; dihydroorotate dehydrogenase; KEGG: ajs:Ajs_3586 putative TIM-barrel protein, nifR3 family
YP_001562593.1	involved in de novo purine biosynthesis
YP_001562594.1	PFAM: cytochrome c class I; KEGG: ajs:Ajs_3583 cytochrome c, class I
YP_001562595.1	KEGG: ade:Adeh_2154 DNA-3-methyladenine glycosylase I; TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase
YP_001562596.1	PFAM: Integrase catalytic region; KEGG: ppf:Pput_3520 integrase, catalytic region
YP_001562598.1	Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway
YP_001562599.1	PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: aav:Aave_0899 phosphomethylpyrimidine kinase type-1
YP_001562600.1	PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: ajs:Ajs_3579 rubredoxin-type Fe(Cys)4 protein
YP_001562601.1	PFAM: response regulator receiver; KEGG: aav:Aave_0901 response regulator receiver protein
YP_001562602.1	PFAM: response regulator receiver; KEGG: ajs:Ajs_3577 response regulator receiver protein
YP_001562603.1	PFAM: CheW domain protein; KEGG: ajs:Ajs_3576 putative CheW protein
YP_001562604.1	PFAM: chemotaxis sensory transducer; KEGG: aav:Aave_0904 methyl-accepting chemotaxis sensory transducer
YP_001562605.1	PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; KEGG: vei:Veis_3017 CheA signal transduction histidine kinases
YP_001562606.1	PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: aav:Aave_0906 deoxyribodipyrimidine photo-lyase
YP_001562607.1	PFAM: protein of unknown function DUF179; KEGG: ajs:Ajs_3573 protein of unknown function DUF179
YP_001562608.1	similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function
YP_001562609.1	PFAM: phosphoribosyltransferase; KEGG: aav:Aave_0909 phosphoribosyltransferase
YP_001562610.1	catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis
YP_001562611.1	PFAM: amidohydrolase; KEGG: ajs:Ajs_3569 amidohydrolase
YP_001562612.1	PFAM: phospholipid/glycerol acyltransferase; KEGG: vei:Veis_1512 phospholipid/glycerol acyltransferase
YP_001562613.1	PFAM: GCN5-related N-acetyltransferase; KEGG: reh:H16_A2522 hypothetical protein
YP_001562614.1	KEGG: rme:Rmet_2261 putative lipoprotein
YP_001562615.1	KEGG: aav:Aave_2928 hypothetical protein
YP_001562616.1	PFAM: Stage II sporulation E family protein; KEGG: rme:Rmet_2259 serine phosphatase
YP_001562617.1	PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: aav:Aave_0913 ABC transporter-related protein
YP_001562618.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_0914 binding-protein-dependent transport systems inner membrane component
YP_001562619.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_A1362 transcriptional regulator, LysR-family
YP_001562620.1	catalyzes the transformation of hydroxyatrazine to N-isopropylammelide and ethylamine in the atrazine degradation pathway.
YP_001562621.1	TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: rme:Rmet_3725 uracil-xanthine permease
YP_001562622.1	TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: ajs:Ajs_3564 arsenate reductase
YP_001562623.1	KEGG: aav:Aave_3965 protease Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein
YP_001562624.1	PFAM: Dual specificity protein phosphatase; ABC transporter related; SMART: AAA ATPase; KEGG: pna:Pnap_0369 ABC transporter related
YP_001562625.1	KEGG: pna:Pnap_0368 hypothetical protein
YP_001562626.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: aav:Aave_3964 two component transcriptional regulator, winged helix family
YP_001562627.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: aav:Aave_3963 integral membrane sensor signal transduction histidine kinase
YP_001562628.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: aha:AHA_2752 GGDEF domain protein
YP_001562629.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: ajs:Ajs_2152 methyl-accepting chemotaxis sensory transducer
YP_001562630.1	KEGG: bch:Bcen2424_2187 hypothetical protein
YP_001562631.1	PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bpe:BP2655 putative IclR-family regulatory protein
YP_001562632.1	PFAM: dihydrodipicolinate synthetase; KEGG: bbr:BB3070 probable dihydrodipicolinate synthase
YP_001562633.1	PFAM: conserved hypothetical protein; KEGG: bbr:BB3069 hypothetical protein
YP_001562635.1	PFAM: Glutathione S-transferase domain; KEGG: bur:Bcep18194_B2348 glutathione S-transferase-like
YP_001562637.1	PFAM: helix-turn-helix domain protein; KEGG: cvi:CV_2150 probable transcriptional regulator
YP_001562638.1	KEGG: sil:SPO1406 hypothetical protein
YP_001562639.1	PFAM: tyrosinase; KEGG: sil:SPO1405 tyrosinase domain protein
YP_001562640.1	PFAM: integrase family protein; KEGG: bte:BTH_II0623 Bbp50
YP_001562642.1	KEGG: spe:Spro_2032 hypothetical protein
YP_001562645.1	KEGG: stm:STM0902 hypothetical protein
YP_001562648.1	PFAM: peptidase S24 and S26 domain protein; KEGG: asa:ASA_3870 prophage transcriptional regulator
YP_001562649.1	PFAM: helix-turn-helix domain protein
YP_001562650.1	KEGG: aav:Aave_1756 transcriptional regulator CII, putative
YP_001562651.1	KEGG: smd:Smed_1667 MT-A70 family protein
YP_001562652.1	PFAM: helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: eba:ebA803 putative helicase
YP_001562653.1	PFAM: Primase 2; KEGG: bpl:BURPS1106A_0113 hypothetical protein
YP_001562656.1	PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: rsh:Rsph17029_3313 HNH endonuclease
YP_001562657.1	PFAM: transcriptional activator Ogr/delta; KEGG: bps:BPSL0138 hypothetical protein
YP_001562659.1	KEGG: bbr:BB1691 phage-related hypothetical protein
YP_001562660.1	PFAM: Terminase; KEGG: bbr:BB1692 terminase
YP_001562661.1	TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein; KEGG: bbr:BB1693 portal protein
YP_001562662.1	PFAM: peptidase S14 ClpP; KEGG: bbr:BB1694 phage-related Clp protease
YP_001562663.1	KEGG: bbr:BB1695 major head protein
YP_001562664.1	KEGG: ppu:PP_1569 hypothetical protein
YP_001562665.1	TIGRFAM: phage head-tail adaptor; PFAM: putative head-tail adaptor protein; KEGG: sit:TM1040_1063 hypothetical protein
YP_001562666.1	TIGRFAM: phage protein, HK97 gp10 family; PFAM: TP901-1 ORF40 family protein; KEGG: asu:Asuc_1243 phage protein, HK97 GP10 family
YP_001562668.1	KEGG: asu:Asuc_1245 hypothetical protein
YP_001562671.1	KEGG: mms:mma_2779 uncharacterized conserved protein (possible phage related tail length tape measure protein)
YP_001562672.1	KEGG: rsq:Rsph17025_3709 glycoside hydrolase, family 24
YP_001562673.1	PFAM: conserved hypothetical protein; KEGG: nwi:Nwi_1179 hypothetical protein
YP_001562674.1	PFAM: NLP/P60 protein; KEGG: sit:TM1040_1071 putative phage cell wall peptidase, NlpC/P60
YP_001562675.1	KEGG: nwi:Nwi_0792 gene transfer agent (GTA) like protein
YP_001562676.1	KEGG: pmy:Pmen_3953 hypothetical protein
YP_001562680.1	PFAM: protein of unknown function DUF847; KEGG: nmc:NMC1002 hypothetical protein
YP_001562681.1	KEGG: aav:Aave_1790 hypothetical protein
YP_001562682.1	KEGG: aav:Aave_1637 hypothetical protein
YP_001562683.1	KEGG: ajs:Ajs_2504 hypothetical protein
YP_001562684.1	KEGG: aav:Aave_2385 hypothetical protein
YP_001562685.1	PFAM: protein of unknown function DUF490; KEGG: aav:Aave_3956 protein of unknown function DUF490
YP_001562686.1	PFAM: surface antigen (D15); KEGG: aav:Aave_3955 surface antigen (D15)
YP_001562687.1	KEGG: ajs:Ajs_3559 hypothetical protein
YP_001562688.1	KEGG: ajs:Ajs_3558 GCN5-related N-acetyltransferase
YP_001562689.1	PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: ajs:Ajs_3556 AAA ATPase, central domain protein
YP_001562690.1	PFAM: cytochrome c class I; KEGG: ajs:Ajs_3555 cytochrome c, class I
YP_001562691.1	PFAM: Domain of unknown function DUF1841; KEGG: aav:Aave_3950 hypothetical protein
YP_001562692.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: kpn:KPN_03412 hypothetical protein
YP_001562693.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc3332 probable transcription regulator protein
YP_001562694.1	transport system that facilitates potassium-efflux
YP_001562695.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: ajs:Ajs_3544 lysine exporter protein (LysE/YggA)
YP_001562696.1	PFAM: MaoC domain protein dehydratase; KEGG: aav:Aave_3913 MaoC domain protein dehydratase
YP_001562697.1	KEGG: aav:Aave_3912 hypothetical protein
YP_001562698.1	TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: ajs:Ajs_3541 tRNA/rRNA methyltransferase (SpoU)
YP_001562699.1	KEGG: ajs:Ajs_3540 ComF family protein
YP_001562700.1	KEGG: aav:Aave_3908 biotin synthesis protein BioC
YP_001562702.1	TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome c class I; cytochrome C oxidase subunit II transmembrane region; KEGG: ajs:Ajs_3537 cytochrome c oxidase, subunit II
YP_001562703.1	KEGG: aav:Aave_3906 cytochrome-c oxidase; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I
YP_001562705.1	involved in the insertion of copper into subunit I of cytochrome C oxidase
YP_001562706.1	KEGG: aav:Aave_3904 putative transmembrane protein
YP_001562707.1	PFAM: cytochrome c oxidase subunit III; KEGG: ajs:Ajs_3532 cytochrome c oxidase, subunit III
YP_001562708.1	KEGG: ajs:Ajs_3531 putative transmembrane protein
YP_001562709.1	KEGG: ajs:Ajs_3530 putative transmembrane cytochrome oxidase
YP_001562710.1	KEGG: ajs:Ajs_3529 hypothetical protein
YP_001562711.1	PFAM: electron transport protein SCO1/SenC; KEGG: aav:Aave_3898 electron transport protein SCO1/SenC
YP_001562712.1	TIGRFAM: PAS sensor protein; PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold domain protein; KEGG: yps:YPTB2424 putative methyl-accepting chemotaxis protein
YP_001562713.1	KEGG: ajs:Ajs_3525 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001562714.1	TIGRFAM: addiction module antidote protein; KEGG: noc:Noc_0569 transcriptional regulator, Cro/CI family
YP_001562715.1	TIGRFAM: addiction module killer protein; PFAM: protein of unknown function DUF891; KEGG: neu:NE1356 hypothetical protein
YP_001562716.1	KEGG: ajs:Ajs_3524 cyclic nucleotide-binding protein
YP_001562717.1	KEGG: bbr:BB0107 hypothetical protein
YP_001562718.1	FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; this condensing enzyme differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs
YP_001562719.1	PFAM: fatty acid desaturase; KEGG: bpe:BP3207 putative fatty acid desaturase
YP_001562720.1	PFAM: fatty acid hydroxylase; KEGG: bbr:BB0103 putative desaturase
YP_001562721.1	PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_3523 uncharacterized protein UPF0065
YP_001562722.1	TIGRFAM: RNA polymerase sigma factor RpoH; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; KEGG: aav:Aave_3894 RNA polymerase, sigma 32 subunit, RpoH
YP_001562723.1	KEGG: rfr:Rfer_3045 hypothetical protein
YP_001562725.1	SMART: helix-turn-helix domain protein; KEGG: vei:Veis_0005 mobile mystery protein A
YP_001562726.1	KEGG: ret:RHE_CH00233 hypothetical protein
YP_001562728.1	PFAM: helix-turn-helix domain protein; KEGG: ecs:ECs2620 putative transcriptional regulator
YP_001562729.1	KEGG: nha:Nham_1614 hypothetical protein
YP_001562730.1	KEGG: bch:Bcen2424_5218 integrase, catalytic region
YP_001562731.1	KEGG: ppf:Pput_0007 AAA ATPase
YP_001562733.1	KEGG: bch:Bcen2424_5215 hypothetical protein
YP_001562734.1	KEGG: pna:Pnap_4834 hypothetical protein
YP_001562735.1	KEGG: ajs:Ajs_1875 hypothetical protein
YP_001562736.1	KEGG: sty:HCM2.0093c hypothetical protein
YP_001562737.1	KEGG: nha:Nham_4496 hypothetical protein
YP_001562738.1	PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: aav:Aave_1150 histone family protein nucleoid-structuring protein H-NS
YP_001562739.1	PFAM: sulfatase; KEGG: aav:Aave_4610 sulfatase
YP_001562740.1	TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mpt:Mpe_A1630 putative two-component sensor
YP_001562741.1	TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mpt:Mpe_A1629 two-component response regulator
YP_001562742.1	PFAM: outer membrane efflux protein; KEGG: tbd:Tbd_1329 probable cobalt-zinc-cadmium outer membrane resistance protein
YP_001562743.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mms:mma_1793 cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family
YP_001562744.1	TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: ajs:Ajs_1849 heavy metal efflux pump, CzcA family
YP_001562745.1	KEGG: ajs:Ajs_2727 hypothetical protein
YP_001562746.1	PFAM: sulfatase; protein of unknown function DUF1705; KEGG: vei:Veis_4349 sulfatase
YP_001562747.1	TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: flagellar basal body rod protein; KEGG: mms:mma_1763 flagellar basal-body rod protein FlgB
YP_001562748.1	KEGG: sfr:Sfri_3475 hypothetical protein
YP_001562749.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: bbt:BBta_7296 cadmium-exporting ATPase
YP_001562750.1	KEGG: xcb:XC_3128 hypothetical protein
YP_001562751.1	PFAM: diacylglycerol kinase; KEGG: aav:Aave_3117 diacylglycerol kinase
YP_001562753.1	KEGG: vei:Veis_4644 porin, gram-negative type
YP_001562754.1	KEGG: aav:Aave_3790 transposase, IS4 family protein
YP_001562755.1	KEGG: aav:Aave_3789 putative TIS1421-transposase orfA protein
YP_001562757.1	PFAM: transcriptional regulator domain protein; KEGG: bbr:BB4471 two-component response regulator
YP_001562758.1	KEGG: aav:Aave_0797 chromate transporter, chromate ion transporter (CHR) family
YP_001562759.1	KEGG: psb:Psyr_1485 hypothetical protein
YP_001562760.1	PFAM: Chloride channel core; KEGG: psb:Psyr_1486 Cl-channel, voltage gated
YP_001562761.1	KEGG: aav:Aave_3789 putative TIS1421-transposase orfA protein
YP_001562762.1	KEGG: aav:Aave_3790 transposase, IS4 family protein
YP_001562763.1	SMART: AAA ATPase; KEGG: xac:XAC2215 hypothetical protein
YP_001562764.1	KEGG: xac:XAC2214 hypothetical protein
YP_001562765.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: reu:Reut_A1523 protein of unknown function DUF6, transmembrane
YP_001562766.1	KEGG: pol:Bpro_2505 hypothetical protein
YP_001562767.1	PFAM: outer membrane efflux protein; KEGG: azo:azo0224 hypothetical outer membrane efflux protein
YP_001562768.1	KEGG: mms:mma_3051 hypothetical protein
YP_001562769.1	KEGG: azo:azo0226 conserved hypothetical secreted protein
YP_001562770.1	TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: azo:azo0227 putative cation efflux system protein
YP_001562771.1	KEGG: azo:azo0228 hypothetical protein
YP_001562772.1	PFAM: protein of unknown function DUF437; KEGG: rme:Rmet_3367 transcriptional regulator
YP_001562773.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rme:Rmet_3368 GCN5-related N-acetyltransferase
YP_001562775.1	KEGG: xom:XOO_2155 hypothetical protein
YP_001562776.1	KEGG: pol:Bpro_5204 integrase, catalytic region
YP_001562777.1	KEGG: ajs:Ajs_3905 transposase IS3/IS911 family protein
YP_001562778.1	KEGG: yen:YE0990 AYP/GTP-binding protein
YP_001562779.1	KEGG: yen:YE0991 hypothetical protein
YP_001562780.1	KEGG: yen:YE0992 hypothetical protein
YP_001562781.1	PFAM: Integrase catalytic region; KEGG: pfo:Pfl_2765 integrase, catalytic region
YP_001562782.1	PFAM: helix-turn-helix domain protein; KEGG: bpd:BURPS668_3499 transcriptional regulator, XRE family
YP_001562783.1	PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: reu:Reut_B4595 regulatory protein, IclR
YP_001562784.1	PFAM: conserved hypothetical protein; KEGG: reh:H16_B1440 probable extra-cytoplasmic solute receptor
YP_001562785.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: reh:H16_B1439 enoyl-CoA hydratase/carnithine racemase
YP_001562786.1	PFAM: CoA-binding domain protein; ATP-grasp domain protein; KEGG: reu:Reut_B4596 CoA-binding
YP_001562787.1	PFAM: MmgE/PrpD family protein; KEGG: reh:H16_B1436 2-methylcitrate dehydratase
YP_001562788.1	TIGRFAM: acetate--CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: mpt:Mpe_A1385 acetyl-coenzyme A synthetase
YP_001562789.1	KEGG: rfr:Rfer_1849 (acyl-carrier protein) S-malonyltransferase
YP_001562790.1	PFAM: triphosphoribosyl-dephospho-CoA protein; KEGG: mpt:Mpe_A2891 triphosphoribosyl-dephospho-CoA synthase
YP_001562791.1	TIGRFAM: holo-ACP synthase, malonate decarboxylase-specific; KEGG: rfr:Rfer_1847 malonate decarboxylase
YP_001562792.1	TIGRFAM: malonate decarboxylase, gamma subunit; PFAM: malonate decarboxylase gamma subunit; KEGG: mpt:Mpe_A2892 malonate decarboxylase gamma subunit
YP_001562793.1	The beta subunit catalyzes the decarboxylation of the malonyl moiety on coenzyme A
YP_001562794.1	TIGRFAM: malonate decarboxylase acyl carrier protein; PFAM: malonate decarboxylase delta subunit; KEGG: mpt:Mpe_A2894 delta subunit of malonate decarboxylase
YP_001562795.1	TIGRFAM: malonate decarboxylase, alpha subunit; KEGG: mpt:Mpe_A2895 alpha subunit of malonate decarboxylase
YP_001562796.1	PFAM: Citrate transporter; Dicarboxylate carrier MatC domain protein; KEGG: mpt:Mpe_A2896 dicarboxylate carrier protein
YP_001562797.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mpt:Mpe_A2897 regulatory protein, LysR
YP_001562798.1	PFAM: luciferase family protein; KEGG: bxe:Bxe_B1542 alkanesulfonate monooxygenase
YP_001562799.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: pap:PSPA7_2908 probable transcriptional regulator
YP_001562800.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pap:PSPA7_2907 probable FMNH2-dependent monooxygenase
YP_001562801.1	PFAM: NADPH-dependent FMN reductase; KEGG: pfo:Pfl_3915 FMN reductase
YP_001562802.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: xac:XAC0854 hypothetical protein
YP_001562803.1	KEGG: bxe:Bxe_B1543 putative monooxygenase, DszA family
YP_001562804.1	PFAM: NLPA lipoprotein; KEGG: ppu:PP_0221 ABC transporter, periplasmic binding protein, putative
YP_001562805.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_B1544 hypothetical protein
YP_001562806.1	PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: aav:Aave_2009 acyl-CoA dehydrogenase, type 2, C-terminal domain
YP_001562807.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pmy:Pmen_2366 binding-protein-dependent transport systems inner membrane component
YP_001562808.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pfl:PFL_0241 D-methionine ABC transporter, ATP-binding protein
YP_001562809.1	PFAM: NLPA lipoprotein; KEGG: bur:Bcep18194_B0309 NlpA lipoprotein
YP_001562810.1	PFAM: NLPA lipoprotein; KEGG: bam:Bamb_4689 NlpA lipoprotein
YP_001562811.1	PFAM: regulatory protein MarR; KEGG: bpl:BURPS1106A_A2106 transcriptional regulator, MarR family
YP_001562812.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bmn:BMA10247_A0721 hypothetical protein
YP_001562813.1	KEGG: acr:Acry_2631 conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family-like protein
YP_001562814.1	KEGG: rha:RHA1_ro10137 2-oxopent-4-enoate hydratase; TIGRFAM: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; PFAM: Hydratase/decarboxylase
YP_001562815.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ajs:Ajs_2567 short-chain dehydrogenase/reductase SDR
YP_001562816.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: azo:azo1936 putative AraC-family transcriptional regulator
YP_001562817.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: reh:H16_A3487 putative short chain dehydrogenase
YP_001562818.1	KEGG: reh:H16_A3486 putative dehydrogenase/oxygenase subunit (flavoprotein)
YP_001562819.1	PFAM: flavin reductase domain protein FMN-binding; KEGG: aau:AAur_0247 putative monooxygenase component B
YP_001562820.1	PFAM: dienelactone hydrolase; KEGG: rme:Rmet_3321 dienelactone hydrolase
YP_001562821.1	PFAM: regulatory protein MarR; KEGG: bra:BRADO6297 putative transcriptional regulatory protein, MarR family
YP_001562822.1	PFAM: class II aldolase/adducin family protein; KEGG: bxe:Bxe_B1223 putative aldolase
YP_001562823.1	KEGG: pol:Bpro_0197 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein
YP_001562824.1	PFAM: CutA1 divalent ion tolerance protein; KEGG: ajs:Ajs_3521 CutA1 divalent ion tolerance protein
YP_001562825.1	PFAM: conserved hypothetical protein; KEGG: reh:H16_B0748 probable extra-cytoplasmic solute receptor
YP_001562826.1	KEGG: ajs:Ajs_3520 signal recognition particle-docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase
YP_001562827.1	PFAM: peptidase M16 domain protein; KEGG: ajs:Ajs_3519 peptidase M16 domain protein
YP_001562828.1	PFAM: peptidase M16 domain protein; KEGG: aav:Aave_3871 peptidase M16 domain protein
YP_001562829.1	TIGRFAM: methyltransferase; PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_3517 putative methyltransferase
YP_001562830.1	KEGG: rfr:Rfer_1667 coenzyme A biosynthesis protein; TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase
YP_001562831.1	KEGG: aav:Aave_3868 hypothetical protein
YP_001562832.1	PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: aav:Aave_3867 transport-associated
YP_001562833.1	KEGG: aav:Aave_3865 hypothetical protein
YP_001562834.1	PFAM: protein of unknown function DUF1328; KEGG: ajs:Ajs_3511 protein of unknown function DUF1328
YP_001562835.1	PFAM: ATP-binding region ATPase domain protein; CHASE3 domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: aav:Aave_3863 multi-sensor signal transduction histidine kinase
YP_001562836.1	PFAM: regulatory protein LuxR; response regulator receiver; KEGG: aav:Aave_3862 two component transcriptional regulator, LuxR family
YP_001562837.1	PFAM: response regulator receiver; KEGG: aav:Aave_3861 response regulator receiver protein
YP_001562838.1	PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: aav:Aave_3860 UBA/ThiF-type NAD/FAD binding protein
YP_001562839.1	KEGG: ajs:Ajs_3506 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41
YP_001562840.1	2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate
YP_001562841.1	PFAM: Rhodanese domain protein; KEGG: ajs:Ajs_3504 rhodanese domain protein
YP_001562842.1	TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; KEGG: ajs:Ajs_3503 glutaredoxin 3
YP_001562843.1	TIGRFAM: protein-export protein SecB; PFAM: protein export chaperone SecB; KEGG: ajs:Ajs_3502 protein-export protein SecB
YP_001562844.1	catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate
YP_001562845.1	catalyzes the decarboxylation of diaminopimelate into lysine; pyridoxal phosphate(PLP)-binding
YP_001562846.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_4245 transcriptional regulator, LysR family
YP_001562847.1	KEGG: bpd:BURPS668_A1895 hypothetical protein
YP_001562848.1	catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine
YP_001562849.1	catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate
YP_001562851.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: chu:CHU_1770 ABC transporter, ATP-binding protein
YP_001562852.1	SMART: cyclic nucleotide-binding; KEGG: neu:NE1296 cyclic nucleotide-binding domain:cAMP-dependent protein kinase
YP_001562853.1	KEGG: reh:H16_A1823 hypothetical protein
YP_001562854.1	PFAM: conserved hypothetical protein; KEGG: rme:Rmet_3604 uncharacterized protein UPF0065
YP_001562855.1	PFAM: DTW domain containing protein; KEGG: ajs:Ajs_1957 DTW domain containing protein
YP_001562856.1	PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase; KEGG: ajs:Ajs_3495 5-carboxymethyl-2-hydroxymuconate isomerase
YP_001562857.1	KEGG: aav:Aave_3843 8-amino-7-oxononanoate synthase; TIGRFAM: 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II
YP_001562858.1	KEGG: pol:Bpro_0899 dethiobiotin synthase; TIGRFAM: dethiobiotin synthase; PFAM: Cobyrinic acid ac-diamide synthase
YP_001562859.1	TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; KEGG: aav:Aave_3841 adenosylmethionine-8-amino-7-oxononanoate aminotransferase
YP_001562860.1	Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5)
YP_001562861.1	PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: aav:Aave_3845 6-pyruvoyl tetrahydropterin synthase and hypothetical protein
YP_001562862.1	KEGG: aav:Aave_3844 hypothetical protein
YP_001562863.1	PFAM: chromosome segregation and condensation protein ScpA; KEGG: ajs:Ajs_3492 chromosome segregation and condensation protein ScpA
YP_001562864.1	KEGG: ajs:Ajs_3491 hypothetical protein
YP_001562865.1	KEGG: ajs:Ajs_3490 putative lipoprotein
YP_001562866.1	PFAM: protein of unknown function DUF161; KEGG: ajs:Ajs_3489 protein of unknown function DUF161
YP_001562867.1	KEGG: ajs:Ajs_3484 hypothetical protein
YP_001562868.1	methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content
YP_001562869.1	PFAM: Patatin; KEGG: aav:Aave_3832 patatin
YP_001562870.1	KEGG: aav:Aave_3831 restriction endonuclease
YP_001562871.1	PFAM: protein of unknown function DUF59; KEGG: ajs:Ajs_3476 protein of unknown function DUF59
YP_001562872.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pna:Pnap_0823 transcriptional regulator, LysR family
YP_001562873.1	PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: aav:Aave_3932 isoquinoline 1-oxidoreductase
YP_001562874.1	PFAM: isochorismatase hydrolase; KEGG: aav:Aave_3931 isochorismatase hydrolase
YP_001562875.1	KEGG: aav:Aave_3930 hypothetical protein
YP_001562876.1	PFAM: alpha/beta hydrolase fold; KEGG: aav:Aave_3929 alpha/beta hydrolase fold
YP_001562877.1	PFAM: Asp/Glu/hydantoin racemase; KEGG: aav:Aave_3928 Asp/Glu racemase
YP_001562878.1	PFAM: monooxygenase FAD-binding; KEGG: aav:Aave_3927 salicylate 1-monooxygenase
YP_001562879.1	PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: aav:Aave_3926 (2Fe-2S)-binding domain protein
YP_001562880.1	KEGG: aav:Aave_3925 cytochrome c, class I
YP_001562881.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: aav:Aave_3924 major facilitator superfamily MFS_1
YP_001562882.1	PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: aav:Aave_4248 N-acetylmuramoyl-L-alanine amidase, family 2
YP_001562884.1	PFAM: regulatory protein MarR; KEGG: aav:Aave_3922 transcriptional regulator, MarR family
YP_001562885.1	PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: mpt:Mpe_A3709 NADH dehydrogenase (quinone)
YP_001562886.1	TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: mpt:Mpe_A3710 NAD-dependent formate dehydrogenase alpha subunit
YP_001562887.1	KEGG: bxe:Bxe_A0963 NAD-dependent formate dehydrogenase, delta subunit
YP_001562888.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bth:BT_2116 hypothetical protein
YP_001562889.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pol:Bpro_0673 transcriptional regulator, LysR family
YP_001562890.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: dar:Daro_0097 protein of unknown function DUF6, transmembrane
YP_001562891.1	PFAM: conserved hypothetical protein; KEGG: pol:Bpro_3854 uncharacterized protein UPF0065
YP_001562892.1	PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase domain protein; KEGG: pna:Pnap_2116 intradiol ring-cleavage dioxygenase
YP_001562893.1	PFAM: conserved hypothetical protein; KEGG: pna:Pnap_2117 uncharacterized protein UPF0065
YP_001562894.1	KEGG: ajs:Ajs_0141 muconolactone delta-isomerase; TIGRFAM: muconolactone delta-isomerase; PFAM: Muconolactone delta-isomerase
YP_001562895.1	TIGRFAM: muconate and chloromuconate cycloisomerase; PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: pna:Pnap_2119 muconate and chloromuconate cycloisomerases
YP_001562896.1	KEGG: aav:Aave_2236 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001562897.1	PFAM: extracellular solute-binding protein family 3; KEGG: azo:azo0499 putative cyclohexadienyl dehydratase
YP_001562898.1	PFAM: response regulator receiver; KEGG: aav:Aave_2238 response regulator receiver protein
YP_001562899.1	TIGRFAM: DNA binding domain protein, excisionase family; PFAM: regulatory protein MerR; response regulator receiver; KEGG: aav:Aave_2239 response regulator receiver protein
YP_001562900.1	PFAM: response regulator receiver; Hpt domain protein; KEGG: aav:Aave_2240 response regulator receiver protein
YP_001562902.1	PFAM: PepSY-associated TM helix domain protein; KEGG: aav:Aave_3008 PepSY-associated TM helix domain protein
YP_001562903.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rpc:RPC_2858 TonB-dependent siderophore receptor
YP_001562904.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: mms:mma_1159 outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid
YP_001562905.1	PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bam:Bamb_5992 transcriptional regulator, AraC family
YP_001562906.1	PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: bur:Bcep18194_C6613 metal-dependent phosphohydrolase
YP_001562907.1	PFAM: MmgE/PrpD family protein; KEGG: vei:Veis_3318 MmgE/PrpD family protein
YP_001562908.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rme:Rmet_5425 acyl-CoA dehydrogenase-like protein
YP_001562909.1	PFAM: conserved hypothetical protein; KEGG: vei:Veis_3320 uncharacterized protein UPF0065
YP_001562910.1	PFAM: CoA-binding domain protein; KEGG: vei:Veis_3321 CoA-binding domain protein
YP_001562911.1	PFAM: alpha/beta hydrolase fold; KEGG: rme:Rmet_4220 alpha/beta hydrolase fold
YP_001562912.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: vei:Veis_3317 transcriptional regulator, LysR family
YP_001562913.1	PFAM: major facilitator superfamily MFS_1; KEGG: pfl:PFL_4411 mutlidrug resistance protein, putative
YP_001562914.1	KEGG: aav:Aave_4457 transcriptional regulator, TetR family
YP_001562915.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: ppf:Pput_2733 putative transcriptional regulator, GntR family
YP_001562916.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: nmu:Nmul_A2052 protein of unknown function DUF6
YP_001562917.1	PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0989 uncharacterized protein UPF0065
YP_001562918.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B2608 transcriptional regulator, LysR family
YP_001562919.1	KEGG: sco:SCO7477 hypothetical protein
YP_001562921.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pna:Pnap_2120 transcriptional regulator, LysR family
YP_001562924.1	PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: ajs:Ajs_3453 5'-nucleotidase domain protein
YP_001562925.1	PFAM: thioesterase superfamily protein; KEGG: rfr:Rfer_1696 phenylacetic acid degradation-related protein
YP_001562926.1	PFAM: regulatory protein MarR; KEGG: mpt:Mpe_A2923 transcriptional regulator, MarR family
YP_001562927.1	PFAM: major facilitator superfamily MFS_1; KEGG: reu:Reut_B4323 major facilitator superfamily MFS_1
YP_001562928.1	PFAM: Smr protein/MutS2; KEGG: aav:Aave_3777 Smr protein/MutS2
YP_001562929.1	PFAM: DNA repair protein RadC; KEGG: ajs:Ajs_3450 DNA repair protein RadC
YP_001562930.1	PFAM: peptidylprolyl isomerase FKBP-type; KEGG: aav:Aave_3772 peptidylprolyl isomerase, FKBP-type
YP_001562931.1	catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway
YP_001562932.1	PFAM: CBS domain containing protein; KEGG: ajs:Ajs_3446 putative signal transduction protein with CBS domains
YP_001562933.1	catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_001562934.1	PFAM: integrase family protein; KEGG: pna:Pnap_2283 phage integrase family protein
YP_001562938.1	PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: pnu:Pnuc_0838 histone family protein nucleoid-structuring protein H-NS
YP_001562940.1	PFAM: Exonuclease, phage-type; KEGG: har:HEAR2308 unknown prophage (lambda); putative exonuclease
YP_001562941.1	PFAM: RecT protein; KEGG: bbr:BB2192 phage-related DNA recombination protein
YP_001562952.1	PFAM: protein of unknown function DUF1508; KEGG: pfo:Pfl_1378 duplicated hypothetical protein
YP_001562954.1	PFAM: peptidase S24 and S26 domain protein; KEGG: aav:Aave_1607 putative prophage repressor
YP_001562956.1	KEGG: ecs:ECs1073 hypothetical protein
YP_001562958.1	KEGG: bbr:BB3510 phage-related hypothetical protein
YP_001562962.1	KEGG: sit:TM1040_1689 hypothetical protein
YP_001562964.1	PFAM: Lambda NinG family protein; KEGG: pfl:PFL_3773 NinG protein
YP_001562966.1	KEGG: ret:RHE_CH01092 putative terminase small subunit protein
YP_001562967.1	TIGRFAM: phage terminase, large subunit, PBSX family; KEGG: bhe:BH09390 phage related protein
YP_001562968.1	KEGG: smd:Smed_1838 hypothetical protein
YP_001562969.1	KEGG: bbt:BBta_5790 hypothetical protein
YP_001562970.1	KEGG: smd:Smed_1831 hypothetical protein
YP_001562971.1	KEGG: bbt:BBta_5785 putative phage major head protein
YP_001562975.1	KEGG: zmo:ZMO0389 constituent protein
YP_001562976.1	KEGG: cel:H02F09.3 H02F09.3
YP_001562980.1	KEGG: ddi:DDBDRAFT_0188625 hypothetical protein
YP_001562982.1	KEGG: mul:MUL_3292 PE-PGRS family protein
YP_001562984.1	KEGG: bpd:BURPS668_A2339 hypothetical protein
YP_001562985.1	KEGG: mms:mma_2193 hypothetical protein
YP_001562987.1	PFAM: HNH endonuclease; KEGG: gfo:GFO_2427 HNH endonuclease family protein
YP_001562988.1	PFAM: protein of unknown function DUF847; KEGG: abu:Abu_1684 hypothetical protein
YP_001562989.1	KEGG: mpt:Mpe_A1850 hypothetical protein
YP_001562993.1	PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: aav:Aave_1150 histone family protein nucleoid-structuring protein H-NS
YP_001562995.1	KEGG: azo:azo1773 hypothetical protein
YP_001562996.1	PFAM: PRC-barrel domain protein; KEGG: sal:Sala_1396 PRC-barrel
YP_001562997.1	KEGG: pna:Pnap_3624 hypothetical protein
YP_001562998.1	PFAM: protein of unknown function DUF1304; KEGG: mpt:Mpe_A3500 hypothetical protein
YP_001562999.1	KEGG: pna:Pnap_3588 hypothetical protein
YP_001563000.1	KEGG: pna:Pnap_3592 hypothetical protein
YP_001563003.1	KEGG: pna:Pnap_3588 hypothetical protein
YP_001563004.1	KEGG: pna:Pnap_3593 hypothetical protein
YP_001563005.1	KEGG: bbr:BB1921 putative 4-hydroxythreonine-4-phosphate dehydrogenase; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA
YP_001563006.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_5693 transcriptional regulator, LysR family
YP_001563007.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_B0865 transcriptional regulator, LysR-family
YP_001563008.1	KEGG: reh:H16_B0866 hypothetical protein
YP_001563009.1	PFAM: Na+/solute symporter; KEGG: reh:H16_B0867 APC transporter, SSS family
YP_001563010.1	PFAM: amidohydrolase; Amidohydrolase 3; KEGG: reh:H16_B0868 metal-dependent hydrolase
YP_001563011.1	PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: reh:H16_B0869 hypothetical protein
YP_001563012.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; KEGG: rme:Rmet_5665 NmrA-like protein
YP_001563013.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rme:Rmet_5666 transcriptional regulator, LysR family
YP_001563015.1	PFAM: conserved hypothetical protein; KEGG: pol:Bpro_2038 conserved hypothetical protein 698
YP_001563016.1	PFAM: phosphate acetyl/butaryl transferase; KEGG: acr:Acry_3031 phosphate butyryltransferase
YP_001563017.1	catalyzes the formation of acetyl phosphate and sulfite from 2-sulfoacetaldehyde; is active when grown on taurine as a sole carbon source
YP_001563018.1	PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: reu:Reut_B3754 regulatory protein, IclR
YP_001563019.1	KEGG: reu:Reut_B3755 putative MoxR-like ATPase; PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_001563020.1	PFAM: Cobalt chelatase CobT subunit; KEGG: reu:Reut_B3756 CobT protein
YP_001563021.1	PFAM: alpha/beta hydrolase fold; KEGG: pna:Pnap_2121 alpha/beta hydrolase fold
YP_001563022.1	KEGG: vei:Veis_4741 hypothetical protein
YP_001563023.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; electron transport protein SCO1/SenC; KEGG: mpt:Mpe_A3172 putative lipoprotein
YP_001563024.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bja:blr0364 hypothetical protein
YP_001563025.1	KEGG: hch:HCH_00928 hypothetical protein
YP_001563026.1	PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: aav:Aave_2532 protein tyrosine phosphatase
YP_001563028.1	TIGRFAM: nitrite reductase [NAD(P)H], small subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: azo:azo1176 nitrite reductase small subunit, probable
YP_001563029.1	TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: azo:azo1175 nitrite reductase (NAD(P)H) large subunit,probable
YP_001563030.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: reh:H16_B2519 transcriptional regulator
YP_001563031.1	PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: bam:Bamb_1586 taurine dioxygenase
YP_001563032.1	PFAM: protein of unknown function DUF849; KEGG: reu:Reut_B3902 protein of unknown function DUF849, prokaryotic
YP_001563033.1	PFAM: conserved hypothetical protein; KEGG: reu:Reut_C6081 hypothetical protein
YP_001563034.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: reu:Reut_B3840 zinc-containing alcohol dehydrogenase superfamily
YP_001563035.1	SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rme:Rmet_4629 transcriptional regulator, AraC family
YP_001563036.1	PFAM: protein of unknown function DUF849; KEGG: reh:H16_B1005 hypothetical protein
YP_001563037.1	PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: reu:Reut_A1602 taurine dioxygenase
YP_001563038.1	PFAM: conserved hypothetical protein; KEGG: reu:Reut_B3854 hypothetical protein
YP_001563039.1	KEGG: vei:Veis_4644 porin, gram-negative type
YP_001563040.1	PFAM: protein of unknown function DUF214; KEGG: aav:Aave_3824 protein of unknown function DUF214
YP_001563041.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A3311 transcriptional regulator, LysR family
YP_001563042.1	PFAM: major facilitator superfamily MFS_1; KEGG: mlo:mlr2785 probable integral membrane efflux protein
YP_001563043.1	PFAM: globin; KEGG: ajs:Ajs_3454 globin
YP_001563044.1	PFAM: FAD dependent oxidoreductase; KEGG: bxe:Bxe_B0685 putative taurine dehydrogenase, large subunit
YP_001563045.1	PFAM: protein of unknown function DUF1486; KEGG: reh:H16_B1892 hypothetical protein
YP_001563046.1	PFAM: Spore germination protein; amino acid permease-associated region; KEGG: reu:Reut_B3753 amino acid permease-associated region
YP_001563047.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: reh:H16_B1891 transcriptional regulator, MocR family
YP_001563048.1	TIGRFAM: transcription elongation factor GreB; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: ajs:Ajs_0950 transcription elongation factor GreB
YP_001563049.1	TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: aav:Aave_3237 lytic murein transglycosylase
YP_001563050.1	PFAM: Silent information regulator protein Sir2; KEGG: ajs:Ajs_1839 silent information regulator protein Sir2
YP_001563051.1	KEGG: aav:Aave_3585 (p)ppGpp synthetase I, SpoT/RelA; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase HD region
YP_001563052.1	Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
YP_001563053.1	Essential for recycling GMP and indirectly, cGMP
YP_001563054.1	PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: ajs:Ajs_0926 domain of unknown function DUF1732
YP_001563055.1	PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: ajs:Ajs_0925 protein kinase
YP_001563056.1	PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: ajs:Ajs_0924 protein phosphatase 2C domain protein
YP_001563057.1	HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine
YP_001563058.1	KEGG: aav:Aave_3577 putative oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_001563059.1	KEGG: vei:Veis_4154 hypothetical protein
YP_001563060.1	PFAM: Sporulation domain protein; KEGG: aav:Aave_3575 sporulation domain protein
YP_001563061.1	KEGG: bxe:Bxe_A2724 fumarylacetoacetase (HmgB); TIGRFAM: fumarylacetoacetase; PFAM: fumarylacetoacetate (FAA) hydrolase; Domain of unknown function DUF1969
YP_001563062.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: psa:PST_0861 3-hydroxybutyrate dehydrogenase
YP_001563063.1	PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: bbr:BB4038 putative transcriptional regulator
YP_001563064.1	KEGG: aav:Aave_2994 hypothetical protein
YP_001563065.1	catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive
YP_001563066.1	PFAM: multi antimicrobial extrusion protein MatE
YP_001563067.1	KEGG: fal:FRAAL3454 hypothetical protein
YP_001563068.1	PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: gur:Gura_3524 putative transcriptional regulator, MerR family
YP_001563069.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rso:RSc2321 probable dehydrogenase/reductase oxidoreductase protein
YP_001563070.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: afw:Anae109_2895 transcriptional regulator, LysR family
YP_001563071.1	Hsp31 stabilizes early unfolding protein intermediates under severe heat stress
YP_001563072.1	KEGG: aav:Aave_3790 transposase, IS4 family protein
YP_001563073.1	KEGG: aav:Aave_3789 putative TIS1421-transposase orfA protein
YP_001563075.1	PFAM: regulatory protein ArsR; KEGG: sme:SMc03843 putative transcription regulator protein
YP_001563076.1	KEGG: sme:SMc03842 hypothetical protein
YP_001563077.1	hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates
YP_001563078.1	PFAM: DNA/RNA non-specific endonuclease; KEGG: pol:Bpro_5192 DNA/RNA non-specific endonuclease
YP_001563079.1	PFAM: major facilitator superfamily MFS_1; KEGG: xac:XAC0229 MFS transporter
YP_001563080.1	PFAM: protein of unknown function DUF486; KEGG: mes:Meso_1652 protein of unknown function DUF486
YP_001563081.1	KEGG: aav:Aave_0171 putative secreted protein
YP_001563082.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: aav:Aave_0172 two component, sigma54 specific, transcriptional regulator, fis family
YP_001563083.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bvi:Bcep1808_6446 integral membrane sensor signal transduction histidine kinase
YP_001563085.1	PFAM: EAL domain protein; KEGG: pfl:PFL_3819 EAL domain protein
YP_001563086.1	PFAM: glycosyl transferase group 1; KEGG: eba:ebA1793 putative glycosyl transferase
YP_001563087.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bxe:Bxe_A2790 sigma54 specific transcriptional regulator, fis family
YP_001563088.1	KEGG: bbr:BB1833 hypothetical protein
YP_001563089.1	PFAM: TadE family protein; KEGG: bpa:BPP2374 hypothetical protein
YP_001563090.1	PFAM: TadE family protein; KEGG: bmn:BMA10247_1050 TadE family protein
YP_001563092.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bte:BTH_I2537 TPR domain protein
YP_001563093.1	PFAM: type II secretion system protein; KEGG: bam:Bamb_1407 type II secretion system protein
YP_001563094.1	PFAM: type II secretion system protein; KEGG: reh:H16_B0188 flp pilus assembly protein TadB
YP_001563095.1	PFAM: type II secretion system protein E; KEGG: bch:Bcen2424_1523 type II secretion system protein E
YP_001563096.1	KEGG: bvi:Bcep1808_1488 response regulator receiver protein
YP_001563097.1	PFAM: type II and III secretion system protein; KEGG: bvi:Bcep1808_1487 type II and III secretion system protein
YP_001563098.1	TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: reh:H16_B0184 flp pilus assembly protein CpaB
YP_001563099.1	PFAM: peptidase A24A prepilin type IV; KEGG: bam:Bamb_1400 peptidase A24A, prepilin type IV
YP_001563100.1	PFAM: Flp/Fap pilin component; KEGG: eba:ebD22 INTERPRO: probable Flp/Fap pilin component
YP_001563101.1	PFAM: Flp/Fap pilin component; KEGG: reh:H16_A0722 flp pilus assembly protein, pilin Flp
YP_001563102.1	PFAM: outer membrane efflux protein; KEGG: mag:amb3061 outer membrane protein
YP_001563103.1	TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: mag:amb3476 membrane-fusion protein; multidrug resistance efflux pump
YP_001563104.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mag:amb3475 ABC-type protease/lipase transport system, ATPase and permease components
YP_001563105.1	PFAM: Mur ligase middle domain protein; KEGG: sit:TM1040_2019 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase
YP_001563106.1	PFAM: OmpA/MotB domain protein; KEGG: pol:Bpro_1985 OmpA/MotB
YP_001563107.1	KEGG: bcn:Bcen_6532 PE-PGRS family protein
YP_001563108.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: azo:azo1059 conserved hypothetical secreted protein
YP_001563109.1	KEGG: aav:Aave_2318 ErfK/YbiS/YcfS/YnhG
YP_001563110.1	KEGG: mms:mma_1685 hypothetical protein
YP_001563111.1	PFAM: regulatory protein GntR HTH; KEGG: psb:Psyr_3939 regulatory protein, GntR
YP_001563112.1	KEGG: pfl:PFL_1368 conserved hypothetical protein
YP_001563113.1	PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: pst:PSPTO_4198 cobalamin synthesis protein/P47K family protein
YP_001563114.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pfl:PFL_1365 oxidoreductase, short chain dehydrogenase/reductase family
YP_001563115.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: psp:PSPPH_3932 glucose 1-dehydrogenase, putative
YP_001563116.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: psp:PSPPH_3933 major facilitator family transporter
YP_001563117.1	PFAM: polysaccharide deacetylase; KEGG: pfl:PFL_1362 polysaccharide deacetylase family protein
YP_001563118.1	PFAM: Amidase; KEGG: pfl:PFL_1361 amidase family protein
YP_001563120.1	KEGG: har:HEAR2597 putative membrane protein; putative 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
YP_001563121.1	PFAM: Resolvase domain; KEGG: bpd:BURPS668_2984 putative site-specific recombinases, DNA invertase Pin
YP_001563122.1	PFAM: Zonular occludens toxin; KEGG: ajs:Ajs_0719 Zonular occludens toxin
YP_001563123.1	KEGG: ajs:Ajs_0720 hypothetical protein
YP_001563124.1	KEGG: ajs:Ajs_0721 hypothetical protein
YP_001563125.1	KEGG: ajs:Ajs_0721 hypothetical protein
YP_001563127.1	KEGG: ajs:Ajs_0723 conserved hypothetical protein, putative phage associated protein
YP_001563128.1	PFAM: replication initiation factor; KEGG: ajs:Ajs_0724 replication initiation factor
YP_001563129.1	KEGG: ajs:Ajs_0726 hypothetical protein
YP_001563130.1	KEGG: aav:Aave_2410 hypothetical protein
YP_001563131.1	NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate
YP_001563132.1	TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: ajs:Ajs_1113 uracil-xanthine permease
YP_001563133.1	PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: ajs:Ajs_1114 peptidase dimerisation domain protein
YP_001563134.1	KEGG: ajs:Ajs_1115 amidase, hydantoinase/carbamoylase family; TIGRFAM: amidase, hydantoinase/carbamoylase family; OHCU decarboxylase; PFAM: peptidase M20; peptidase dimerisation domain protein
YP_001563135.1	KEGG: ajs:Ajs_1117 polysaccharide deacetylase; TIGRFAM: urate catabolism protein; PFAM: polysaccharide deacetylase
YP_001563136.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: ajs:Ajs_1118 transcriptional regulator, GntR family
YP_001563137.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_1119 transcriptional regulator, LysR family
YP_001563138.1	KEGG: ajs:Ajs_1120 tartrate dehydrogenase; TIGRFAM: tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase
YP_001563139.1	PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_1121 uncharacterized protein UPF0065
YP_001563140.1	PFAM: MOFRL domain protein; KEGG: ajs:Ajs_1122 hydroxypyruvate reductase
YP_001563141.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pol:Bpro_4560 transcriptional regulator, LysR family
YP_001563142.1	catalyzes the formation of 2-hydroxy-3-oxopropanoate (tartronate semialdehyde) from two molecules of glyoxylate
YP_001563143.1	KEGG: pol:Bpro_4562 hydroxypyruvate isomerase; TIGRFAM: hydroxypyruvate isomerase; PFAM: Xylose isomerase domain protein TIM barrel
YP_001563144.1	KEGG: pol:Bpro_4563 2-hydroxy-3-oxopropionate reductase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding
YP_001563145.1	KEGG: aav:Aave_1114 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase
YP_001563146.1	TIGRFAM: hydroxyisourate hydrolase; PFAM: Transthyretin; KEGG: ajs:Ajs_1123 transthyretin
YP_001563147.1	PFAM: DoxX family protein; KEGG: rfr:Rfer_0915 DoxX
YP_001563148.1	KEGG: bbr:BB2045 putative lipoprotein
YP_001563149.1	PFAM: Arc domain protein DNA binding domain protein; KEGG: aav:Aave_1717 Arc domain protein DNA binding domain protein
YP_001563151.1	KEGG: ajs:Ajs_1124 hypothetical protein
YP_001563152.1	TIGRFAM: xanthine dehydrogenase accessory protein XdhC; PFAM: protein of unknown function DUF182; KEGG: pna:Pnap_1013 protein of unknown function DUF182
YP_001563153.1	PFAM: protein of unknown function DUF989; KEGG: ajs:Ajs_1128 protein of unknown function DUF989
YP_001563154.1	PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: aav:Aave_1120 diguanylate cyclase/phosphodiesterase
YP_001563155.1	PFAM: regulatory protein Crp; KEGG: ajs:Ajs_3105 putative transcriptional regulator, Crp/Fnr family
YP_001563156.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: aav:Aave_1127 diguanylate cyclase with PAS/PAC sensor
YP_001563157.1	PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: reh:H16_B1187 transcriptional regulator, CRP-family
YP_001563158.1	KEGG: nca:Noca_4310 hypothetical protein
YP_001563159.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pol:Bpro_1482 transcriptional regulator, LysR family
YP_001563160.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_3101 ABC transporter related
YP_001563161.1	PFAM: inner-membrane translocator; KEGG: aav:Aave_1133 inner-membrane translocator
YP_001563162.1	PFAM: inner-membrane translocator; KEGG: aav:Aave_1134 inner-membrane translocator
YP_001563163.1	PFAM: basic membrane lipoprotein; KEGG: aav:Aave_1135 basic membrane lipoprotein
YP_001563164.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ent:Ent638_1862 integral membrane sensor signal transduction histidine kinase
YP_001563165.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ent:Ent638_1861 two component transcriptional regulator, winged helix family
YP_001563166.1	PFAM: peptidase S41; KEGG: hch:HCH_04120 periplasmic protease
YP_001563167.1	PFAM: basic membrane lipoprotein; KEGG: aav:Aave_1135 basic membrane lipoprotein
YP_001563168.1	PFAM: Rieske [2Fe-2S] domain protein; KEGG: aav:Aave_1136 Rieske (2Fe-2S) domain protein
YP_001563169.1	KEGG: pna:Pnap_1040 adenosine deaminase; TIGRFAM: adenosine deaminase; PFAM: adenosine/AMP deaminase
YP_001563170.1	PFAM: histidine triad (HIT) protein; KEGG: dar:Daro_0004 histidine triad (HIT) protein
YP_001563171.1	PFAM: basic membrane lipoprotein; KEGG: aav:Aave_1142 basic membrane lipoprotein
YP_001563172.1	Catalyzes the deamination of guanine
YP_001563173.1	Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis
YP_001563174.1	KEGG: bxe:Bxe_A0815 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase
YP_001563175.1	3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate
YP_001563176.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: aav:Aave_3998 diguanylate cyclase
YP_001563177.1	catalyzes the formation of L-proline from L-ornithine
YP_001563179.1	PFAM: protein of unknown function zinc metallopeptidase putative; KEGG: aav:Aave_1147 protein of unknown function, zinc metallopeptidase putative
YP_001563180.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: ajs:Ajs_1132 DEAD/DEAH box helicase domain protein
YP_001563181.1	hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP
YP_001563182.1	PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: rfr:Rfer_3026 protein of unknown function DUF21
YP_001563183.1	PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: ajs:Ajs_1144 histone family protein nucleoid-structuring protein H-NS
YP_001563184.1	PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: ajs:Ajs_1146 monooxygenase, FAD-binding
YP_001563185.1	PFAM: major facilitator superfamily MFS_1; KEGG: aav:Aave_4524 major facilitator superfamily MFS_1
YP_001563186.1	TIGRFAM: tryptophan 2,3-dioxygenase; PFAM: tryptophan 23-dioxygenase; KEGG: pol:Bpro_3590 tryptophan 2,3-dioxygenase
YP_001563187.1	TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: helix-turn-helix- domain containing protein AraC type; methylguanine DNA methyltransferase ribonuclease domain protein; Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: rso:RSc2570 probable ADA regulatory of adaptative response contains: methylated-DNA--protein-cysteine methyltransferaseO-6-methylguanine-DNA transcription regulator
YP_001563188.1	PFAM: HhH-GPD family protein; KEGG: cvi:CV_3195 DNA-3-methyladenine glycosidase II
YP_001563189.1	TIGRFAM: kynureninase; PFAM: aminotransferase class V; KEGG: aav:Aave_1156 kynureninase
YP_001563190.1	TIGRFAM: arylformamidase; PFAM: cyclase family protein; KEGG: pol:Bpro_3588 putative cyclase
YP_001563191.1	PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_C7638 amino acid transporter
YP_001563192.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: ppu:PP_3022 transcriptional regulator, AraC family
YP_001563193.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pen:PSEEN2303 transporter, LysE family
YP_001563194.1	PFAM: Endoribonuclease L-PSP; KEGG: bur:Bcep18194_B3155 endoribonuclease L-PSP
YP_001563195.1	TIGRFAM: tryptophan 2,3-dioxygenase; PFAM: tryptophan 23-dioxygenase; KEGG: pol:Bpro_3590 tryptophan 2,3-dioxygenase
YP_001563196.1	catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate
YP_001563197.1	PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_C7638 amino acid transporter
YP_001563198.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: aav:Aave_1158 transcriptional regulator, AsnC family
YP_001563199.1	PFAM: protein of unknown function UPF0153; KEGG: aav:Aave_1159 protein of unknown function UPF0153
YP_001563200.1	PFAM: FeoA family protein; KEGG: aav:Aave_1160 FeoA family protein
YP_001563201.1	TIGRFAM: ferrous iron transport protein B; PFAM: GTP-binding protein HSR1-related; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; KEGG: aav:Aave_1161 ferrous iron transport protein B
YP_001563202.1	KEGG: ajs:Ajs_3005 hypothetical protein
YP_001563203.1	catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation
YP_001563204.1	catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine
YP_001563205.1	KEGG: aav:Aave_1165 hypothetical protein
YP_001563206.1	binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase
YP_001563207.1	TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; KEGG: ajs:Ajs_2999 integral membrane protein MviN
YP_001563208.1	KEGG: vei:Veis_1775 hypothetical protein
YP_001563209.1	KEGG: aav:Aave_1969 hypothetical protein
YP_001563210.1	catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis
YP_001563211.1	TIGRFAM: DnaA regulatory inactivator Hda; PFAM: Chromosomal replication initiator DnaA; KEGG: aav:Aave_1971 chromosomal replication initiator, DnaA
YP_001563212.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; KEGG: aav:Aave_1972 HAD-superfamily subfamily IB hydrolase, TIGR01490
YP_001563213.1	KEGG: ajs:Ajs_2991 poly(A) polymerase; TIGRFAM: poly(A) polymerase; PFAM: Polynucleotide adenylyltransferase region
YP_001563214.1	KEGG: aav:Aave_1974 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK
YP_001563215.1	PFAM: glycosyl transferase family 39; KEGG: bbr:BB4268 hypothetical protein
YP_001563216.1	PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_2989 uncharacterized protein UPF0065
YP_001563217.1	catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose
YP_001563218.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: ajs:Ajs_2986 NAD-dependent epimerase/dehydratase
YP_001563219.1	KEGG: aav:Aave_1979 hypothetical protein
YP_001563220.1	KEGG: ptr:750122 hypothetical protein LOC750122
YP_001563221.1	PFAM: 67-dimethyl-8-ribityllumazine synthase; KEGG: rha:RHA1_ro01631 riboflavin synthase beta subunit
YP_001563222.1	PFAM: Extracellular ligand-binding receptor; KEGG: aav:Aave_3159 extracellular ligand-binding receptor
YP_001563223.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pol:Bpro_4580 transcriptional regulator, LysR family
YP_001563224.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; Male sterility domain; KEGG: pol:Bpro_4581 NAD-dependent epimerase/dehydratase
YP_001563225.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: aav:Aave_0668 glyoxalase/bleomycin resistance protein/dioxygenase
YP_001563226.1	PFAM: major facilitator superfamily MFS_1; KEGG: pae:PA4113 probable MFS transporter
YP_001563227.1	PFAM: major facilitator superfamily MFS_1; KEGG: reh:H16_B0047 MFS transporter
YP_001563228.1	PFAM: CMP/dCMP deaminase zinc-binding; KEGG: har:HEAR0883 putative guanine deaminase (guanase) (guanine aminase) (guanine aminohydrolase) (GAH) (GDEase)
YP_001563229.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: har:HEAR0881 putative transcriptional regulator
YP_001563230.1	PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_2981 uncharacterized protein UPF0065
YP_001563231.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: ajs:Ajs_2980 L-carnitine dehydratase/bile acid-inducible protein F
YP_001563232.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_2979 acyl-CoA dehydrogenase domain protein
YP_001563233.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_2978 transcriptional regulator, LysR family
YP_001563234.1	PFAM: LrgB family protein; KEGG: ajs:Ajs_2977 LrgB family protein
YP_001563235.1	PFAM: LrgA family protein; KEGG: ajs:Ajs_2976 LrgA family protein
YP_001563236.1	KEGG: aav:Aave_1984 hypothetical protein
YP_001563237.1	catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide
YP_001563238.1	PFAM: NUDIX hydrolase; KEGG: ajs:Ajs_2899 NUDIX hydrolase
YP_001563239.1	PFAM: SirA family protein; KEGG: ajs:Ajs_2898 SirA family protein
YP_001563240.1	TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: ajs:Ajs_2897 UTP-glucose-1-phosphate uridylyltransferase GalU
YP_001563241.1	TIGRFAM: valyl-tRNA synthetase; KEGG: ajs:Ajs_2896 valyl-tRNA synthetase
YP_001563242.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: aav:Aave_1994 glyoxalase/bleomycin resistance protein/dioxygenase
YP_001563243.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: bov:BOV_0501 cobalt-zinc-cadmium resistance protein
YP_001563244.1	PFAM: protein of unknown function DUF1272; KEGG: ret:RHE_CH03309 probable urease-associated protein
YP_001563246.1	KEGG: pap:PSPA7_1712 hypothetical protein
YP_001563247.1	KEGG: bur:Bcep18194_B2580 hypothetical protein
YP_001563248.1	PFAM: Negative transcriptional regulator; KEGG: aav:Aave_4171 FMN-binding negative transcriptional regulator
YP_001563249.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: reh:H16_B1977 transcriptional regulator, MocR family
YP_001563250.1	TIGRFAM: conserved repeat domain protein; KEGG: mpt:Mpe_B0343 hypothetical protein
YP_001563251.1	PFAM: YceI family protein; KEGG: pna:Pnap_3578 YceI family protein
YP_001563252.1	PFAM: YceI family protein; KEGG: aav:Aave_3506 YceI family protein
YP_001563253.1	PFAM: cytochrome B561; KEGG: aav:Aave_3507 cytochrome b561
YP_001563254.1	PFAM: HemY domain protein; KEGG: aav:Aave_1996 HemY domain protein
YP_001563255.1	PFAM: protein of unknown function DUF513 hemX; KEGG: vei:Veis_1038 protein of unknown function DUF513, HemX
YP_001563256.1	PFAM: Uroporphyrinogen III synthase HEM4; KEGG: vei:Veis_1039 uroporphyrinogen III synthase
YP_001563257.1	transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis
YP_001563258.1	catalyzes the formation of oxaloacetate from phosphoenolpyruvate
YP_001563259.1	PFAM: EAL domain protein; phosphotransferase system EIIC; KEGG: pfl:PFL_3312 phosphotransferase system EIIC domain/EAL domain protein
YP_001563260.1	With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems
YP_001563261.1	PFAM: flagellar transcriptional activator; KEGG: aav:Aave_2006 flagellar transcriptional activator, FlhD subunit
YP_001563262.1	PFAM: Rhodanese domain protein; KEGG: ajs:Ajs_1033 3-mercaptopyruvate sulfurtransferase
YP_001563263.1	KEGG: aav:Aave_2011 putative transmembrane protein
YP_001563264.1	PFAM: Rieske [2Fe-2S] domain protein; KEGG: ajs:Ajs_1035 Rieske (2Fe-2S) domain protein
YP_001563265.1	PFAM: Exonuclease VII small subunit; KEGG: aav:Aave_2013 exodeoxyribonuclease VII, small subunit
YP_001563266.1	PFAM: Polyprenyl synthetase; KEGG: ajs:Ajs_1037 polyprenyl synthetase
YP_001563267.1	catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate
YP_001563268.1	PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rfr:Rfer_2874 twin-arginine translocation pathway signal
YP_001563269.1	PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rfr:Rfer_2873 twin-arginine translocation pathway signal
YP_001563270.1	TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rfr:Rfer_2872 TRAP dicarboxylate transporter-DctM subunit
YP_001563271.1	PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: vei:Veis_2882 tripartite ATP-independent periplasmic transporter, DctQ component
YP_001563272.1	PFAM: helix-turn-helix Fis-type; GAF domain protein; KEGG: pol:Bpro_1769 putative transcriptional regulator, fis family
YP_001563273.1	PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: vei:Veis_4544 (2Fe-2S)-binding domain protein
YP_001563274.1	PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: vei:Veis_4543 carbon-monoxide dehydrogenase (acceptor)
YP_001563275.1	PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: vei:Veis_4542 transcriptional regulator, fis family
YP_001563276.1	PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: vei:Veis_4537 ATPase associated with various cellular activities, AAA_5
YP_001563277.1	PFAM: VWA containing CoxE family protein; KEGG: vei:Veis_4536 VWA containing CoxE family protein
YP_001563278.1	PFAM: carbon monoxide dehydrogenase subunit G; KEGG: vei:Veis_4535 carbon monoxide dehydrogenase subunit G
YP_001563279.1	PFAM: protein of unknown function DUF182; KEGG: pol:Bpro_0572 protein of unknown function DUF182
YP_001563280.1	KEGG: sco:SCO7641 dehydrogenase
YP_001563281.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: reu:Reut_A0572 secretion protein HlyD
YP_001563282.1	PFAM: acriflavin resistance protein; KEGG: mms:mma_1683 cation/multidrug efflux pump
YP_001563283.1	PFAM: acriflavin resistance protein; KEGG: mms:mma_1682 AcrB/AcrD/AcrF family membrane protein
YP_001563284.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: mms:mma_1681 outer membrane protein, TolC-like
YP_001563285.1	KEGG: aav:Aave_2031 hypothetical protein
YP_001563286.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_0975 ABC-type transport system involved in cytochrome c biogenesis ATPase component-like protein
YP_001563287.1	PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: aav:Aave_2035 response regulator receiver protein
YP_001563288.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase internal region; KEGG: aav:Aave_2036 integral membrane sensor signal transduction histidine kinase
YP_001563289.1	KEGG: ajs:Ajs_1151 hypothetical protein
YP_001563290.1	KEGG: mlo:mlr2123 hypothetical protein
YP_001563291.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mms:mma_1643 TonB-dependent ferric siderophore receptor
YP_001563292.1	PFAM: PepSY-associated TM helix domain protein; KEGG: mms:mma_3524 hypothetical protein
YP_001563293.1	PFAM: PsiF repeat protein; KEGG: ppu:PP_4851 phosphate starvation-inducible protein, PsiF precursor
YP_001563294.1	BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell
YP_001563295.1	TIGRFAM: acetoacetyl-CoA synthase; PFAM: AMP-dependent synthetase and ligase; KEGG: pna:Pnap_2133 acetoacetyl-CoA synthase
YP_001563296.1	PFAM: regulatory protein MarR; KEGG: pol:Bpro_3119 transcriptional regulator, MarR family
YP_001563297.1	KEGG: aav:Aave_2045 alpha/beta hydrolase fold
YP_001563298.1	KEGG: aav:Aave_2046 20S proteasome, A and B subunits
YP_001563299.1	This protein performs the mismatch recognition step during the DNA repair process
YP_001563301.1	PFAM: helix-turn-helix domain protein; KEGG: bch:Bcen2424_3337 transcriptional regulator, XRE family
YP_001563302.1	KEGG: tcx:Tcr_0665 hypothetical protein
YP_001563304.1	KEGG: aav:Aave_3789 putative TIS1421-transposase orfA protein
YP_001563305.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: reh:H16_A0034 transcriptional regulator, GntR-family
YP_001563306.1	PFAM: conserved hypothetical protein; KEGG: pna:Pnap_0869 uncharacterized protein UPF0065
YP_001563307.1	PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: pla:Plav_2454 SMP-30/gluconolaconase/LRE domain protein
YP_001563308.1	catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; catalytic
YP_001563309.1	catalyzes the conversion of 3-hydroxyacyl-CoA to 3-oxyacyl-CoA
YP_001563310.1	PFAM: conserved hypothetical protein; KEGG: bbr:BB0335 hypothetical protein
YP_001563311.1	TIGRFAM: arsenical resistance protein ArsH; PFAM: NADPH-dependent FMN reductase; KEGG: bbr:BB2781 putative NADPH-dependent FMN reductase
YP_001563312.1	TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: bbr:BB2782 arsenate reductase
YP_001563313.1	SMART: regulatory protein ArsR; KEGG: ajs:Ajs_2514 regulatory protein, ArsR
YP_001563314.1	KEGG: rfr:Rfer_4021 hypothetical protein
YP_001563315.1	KEGG: hch:HCH_06792 hypothetical protein
YP_001563317.1	PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: bur:Bcep18194_A5901 cyclopropane-fatty-acyl-phospholipid synthase
YP_001563318.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bbr:BB1991 short chain dehydrogenase
YP_001563319.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bpa:BPP2545 LysR family regulatory protein
YP_001563320.1	PFAM: fatty acid hydroxylase; KEGG: bvi:Bcep1808_2232 sterol desaturase-like protein
YP_001563321.1	PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: reu:Reut_C6419 peptidase S8 and S53, subtilisin, kexin, sedolisin
YP_001563322.1	PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: reu:Reut_C6418 AAA ATPase, central region
YP_001563323.1	KEGG: bps:BPSL0569 hypothetical protein
YP_001563324.1	KEGG: bps:BPSL0570 hypothetical protein
YP_001563325.1	KEGG: bps:BPSL0571 hypothetical protein
YP_001563327.1	PFAM: helix-turn-helix domain protein; KEGG: pau:PA14_31160 hypothetical protein
YP_001563329.1	SMART: regulatory protein ArsR; KEGG: bbr:BB1287 putative regulatory protein
YP_001563330.1	TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; KEGG: ajs:Ajs_0275 translation elongation factor G
YP_001563331.1	PFAM: Integrase catalytic region; KEGG: ppf:Pput_3520 integrase, catalytic region
YP_001563332.1	PFAM: inositol monophosphatase; KEGG: ajs:Ajs_1045 inositol-phosphate phosphatase
YP_001563333.1	PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: ajs:Ajs_1046 RNA methyltransferase, TrmH family, group 1
YP_001563334.1	TIGRFAM: serine O-acetyltransferase; KEGG: aav:Aave_2076 serine O-acetyltransferase
YP_001563335.1	PFAM: nitroreductase; KEGG: ajs:Ajs_1048 nitroreductase
YP_001563336.1	required for the synthesis of the hydromethylpyrimidine moiety of thiamine
YP_001563337.1	PFAM: porin Gram-negative type; KEGG: rso:RSc2760 putative porin signal peptide protein
YP_001563338.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_B0723 RND efflux system, outer membrane lipoprotein, NodT family
YP_001563339.1	PFAM: ABC transporter related; protein of unknown function DUF214; SMART: AAA ATPase; KEGG: shn:Shewana3_3455 ABC transporter related
YP_001563340.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bpl:BURPS1106A_A0836 macrolide efflux protein MacA
YP_001563341.1	KEGG: aav:Aave_1283 putative substrate-binding periplasmic (pbp) ABC transporter protein
YP_001563342.1	PFAM: helix-turn-helix domain protein; KEGG: tbd:Tbd_1344 transcriptional regulator, XRE family
YP_001563343.1	KEGG: reh:H16_B0351 conserved hypothetical protein
YP_001563344.1	TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; KEGG: ajs:Ajs_1051 molybdenum cofactor synthesis domain
YP_001563345.1	PFAM: protein of unknown function DUF615; KEGG: aav:Aave_2078 protein of unknown function DUF615
YP_001563346.1	PFAM: peptidase U62 modulator of DNA gyrase; KEGG: ajs:Ajs_1053 peptidase U62, modulator of DNA gyrase
YP_001563347.1	PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: pde:Pden_2753 5-carboxymethyl-2-hydroxymuconate delta-isomerase
YP_001563348.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: aav:Aave_4495 methyl-accepting chemotaxis sensory transducer
YP_001563349.1	PFAM: MscS Mechanosensitive ion channel; KEGG: pmy:Pmen_0559 MscS mechanosensitive ion channel
YP_001563350.1	PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: mpt:Mpe_A3779 hypothetical protein
YP_001563351.1	PFAM: protein of unknown function DUF444; KEGG: mpt:Mpe_A3778 hypothetical protein
YP_001563352.1	PFAM: SpoVR family protein; KEGG: mpt:Mpe_A3777 hypothetical protein
YP_001563353.1	KEGG: rme:Rmet_1299 hypothetical protein
YP_001563354.1	TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: pna:Pnap_0178 ammonium transporter
YP_001563355.1	PFAM: penicillin-binding protein transpeptidase; KEGG: syn:slr0319 beta-lactamase
YP_001563356.1	PFAM: protein of unknown function DUF159; KEGG: pna:Pnap_1661 protein of unknown function DUF159
YP_001563357.1	TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: psa:PST_2727 phenazine biosynthesis protein, PhzF family
YP_001563358.1	KEGG: saz:Sama_0272 hypothetical protein
YP_001563359.1	PFAM: regulatory protein LuxR; KEGG: rpb:RPB_1819 transcriptional regulator, LuxR family
YP_001563360.1	PFAM: regulatory protein TetR; KEGG: tbd:Tbd_1984 possible transcriptional regulator, TetR family
YP_001563361.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bpd:BURPS668_1706 oxidoreductase, pyridine nucleotide-disulphide family
YP_001563362.1	PFAM: protein of unknown function DUF1641; KEGG: pfl:PFL_1327 hypothetical protein
YP_001563363.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: ajs:Ajs_1054 protein of unknown function DUF6, transmembrane
YP_001563364.1	KEGG: bbr:BB3605 putative iron uptake protein
YP_001563365.1	KEGG: bbr:BB4741 putative iron-regulated membrane protein
YP_001563366.1	KEGG: bbr:BB4740 hypothetical protein
YP_001563367.1	TIGRFAM: extracellular repeat protein, HAF family; KEGG: fra:Francci3_4152 hypothetical protein
YP_001563368.1	KEGG: aav:Aave_2080 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; TIGRFAM: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; PFAM: HpcH/HpaI aldolase
YP_001563369.1	TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: aav:Aave_2081 succinic semialdehyde dehydrogenase
YP_001563370.1	PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; KEGG: aav:Aave_2082 galactarate dehydratase
YP_001563371.1	PFAM: conserved hypothetical protein; KEGG: aav:Aave_2083 uncharacterized protein UPF0065
YP_001563372.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_2084 transcriptional regulator, LysR family
YP_001563375.1	PFAM: ferredoxin; KEGG: pla:Plav_2520 ferredoxin
YP_001563376.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: ccr:CC_3525 ferredoxin reductase
YP_001563377.1	KEGG: mms:mma_1224 hypothetical protein
YP_001563379.1	TIGRFAM: glutathione-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: ecp:ECP_3590 glutathione reductase
YP_001563380.1	KEGG: pau:PA14_13330 putative phosphatase or phosphodiesterase
YP_001563381.1	KEGG: bxe:Bxe_B0543 hypothetical protein
YP_001563382.1	KEGG: reu:Reut_A3203 hypothetical protein
YP_001563383.1	KEGG: ajs:Ajs_2860 tartrate dehydrogenase; TIGRFAM: tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase
YP_001563384.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_2088 transcriptional regulator, LysR family
YP_001563385.1	KEGG: aav:Aave_2091 GatB/YqeY domain protein
YP_001563386.1	a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA
YP_001563387.1	PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ajs:Ajs_2846 HI0933 family protein
YP_001563388.1	PFAM: thioesterase superfamily protein; KEGG: ajs:Ajs_2844 thioesterase superfamily protein
YP_001563389.1	KEGG: pap:PSPA7_4410 virulence sensor protein BvgS; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: extracellular solute-binding protein family 3
YP_001563390.1	SMART: extracellular solute-binding protein family 3; KEGG: pap:PSPA7_4410 virulence sensor protein BvgS
YP_001563391.1	TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: ajs:Ajs_2843 uroporphyrin-III C-methyltransferase
YP_001563392.1	PFAM: glycosyl transferase family 3; KEGG: ajs:Ajs_2842 glycosyl transferase, family 3
YP_001563393.1	PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: ajs:Ajs_2841 molybdopterin oxidoreductase
YP_001563394.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ajs:Ajs_2839 nitrite reductase (NAD(P)H), large subunit
YP_001563395.1	KEGG: aav:Aave_2113 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; TIGRFAM: PAS sensor protein; PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001563396.1	KEGG: ajs:Ajs_2835 hypothetical protein
YP_001563397.1	PFAM: CBS domain containing protein; KEGG: aav:Aave_2114 CBS domain containing membrane protein
YP_001563398.1	KEGG: ajs:Ajs_2833 nitrate ABC transporter, ATPase subunits C and D; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001563399.1	TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_2146 nitrate ABC transporter, inner membrane subunit
YP_001563400.1	KEGG: ajs:Ajs_2831 twin-arginine translocation pathway signal
YP_001563401.1	PFAM: ANTAR domain protein; Nitrate and nitrite sensing domain protein; KEGG: azo:azo0941 probable nitrate regulatory protein
YP_001563402.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: aav:Aave_1490 diguanylate cyclase/phosphodiesterase
YP_001563403.1	in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity
YP_001563404.1	KEGG: vei:Veis_1656 heat shock protein HSP20
YP_001563405.1	KEGG: aav:Aave_2154 putative transporter signal peptide protein
YP_001563406.1	TIGRFAM: lytic murein transglycosylase B; KEGG: ajs:Ajs_2817 lytic murein transglycosylase B
YP_001563407.1	PFAM: transglutaminase domain protein; KEGG: ajs:Ajs_2816 transglutaminase domain protein
YP_001563408.1	PFAM: protein of unknown function DUF58; KEGG: ajs:Ajs_2815 protein of unknown function DUF58
YP_001563409.1	PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: ajs:Ajs_2814 ATPase associated with various cellular activities, AAA_3
YP_001563410.1	PFAM: histone deacetylase superfamily; KEGG: aav:Aave_2164 histone deacetylase superfamily
YP_001563411.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ajs:Ajs_2812 enoyl-CoA hydratase/isomerase
YP_001563412.1	PFAM: MscS Mechanosensitive ion channel; KEGG: aav:Aave_2167 MscS mechanosensitive ion channel
YP_001563413.1	PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: ajs:Ajs_2810 electron transfer flavoprotein beta-subunit
YP_001563414.1	PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: ajs:Ajs_2809 electron transfer flavoprotein, alpha subunit
YP_001563415.1	PFAM: Extracellular ligand-binding receptor; KEGG: pol:Bpro_4388 extracellular ligand-binding receptor
YP_001563416.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_2808 acyl-CoA dehydrogenase domain protein
YP_001563417.1	PFAM: 2-nitropropane dioxygenase NPD; KEGG: ajs:Ajs_2807 2-nitropropane dioxygenase, NPD
YP_001563418.1	KEGG: mms:mma_2016 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase
YP_001563419.1	KEGG: mms:mma_2015 ATP-binding component of cytochrome-related transport system; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001563420.1	PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: oan:Oant_3541 cytochrome bd ubiquinol oxidase subunit I
YP_001563421.1	KEGG: har:HEAR1375 cytochrome d terminal oxidase, polypeptide subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II
YP_001563422.1	TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein; KEGG: har:HEAR1376 conserved hypothetical protein: putative YbgT protein of unknown function; putative signal peptide
YP_001563423.1	KEGG: mpt:Mpe_A2572 putative transcriptional regulator ArsR family
YP_001563424.1	PFAM: acyltransferase 3; KEGG: ajs:Ajs_2806 acyltransferase 3
YP_001563425.1	PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: ajs:Ajs_2805 GreA/GreB family elongation factor
YP_001563426.1	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: aav:Aave_2176 radical SAM domain protein
YP_001563427.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bbr:BB2682 probable LysR-family transcriptional regulator
YP_001563428.1	PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bbr:BB2683 putative racemase
YP_001563429.1	PFAM: conserved hypothetical protein; KEGG: pol:Bpro_2752 uncharacterized protein UPF0065
YP_001563430.1	PFAM: regulatory protein MarR; regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B2552 transcriptional regulator, LysR family
YP_001563431.1	TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: tbd:Tbd_2300 phosphonate-binding periplasmic protein
YP_001563432.1	KEGG: tbd:Tbd_2299 ABC phosphate/phosphonate transport system ATPase; TIGRFAM: phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001563433.1	KEGG: bpm:BURPS1710b_A1869 hypothetical protein
YP_001563434.1	TIGRFAM: phosphonate metabolism-associated iron-containing alcohol dehydrogenase; PFAM: iron-containing alcohol dehydrogenase; KEGG: reh:H16_B0831 alcohol dehydrogenase, class IV
YP_001563435.1	catalyzes the degradation of phosphonoacetaldehyde to acetaldehyde and phosphate
YP_001563436.1	KEGG: ajs:Ajs_2801 carboxylesterase; TIGRFAM: S-formylglutathione hydrolase; PFAM: putative esterase
YP_001563437.1	TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ajs:Ajs_2800 alcohol dehydrogenase, zinc-binding domain protein
YP_001563438.1	PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: aav:Aave_2196 transcriptional regulator, AraC family
YP_001563439.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: aav:Aave_1567 DEAD/DEAH box helicase domain protein
YP_001563440.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bxe:Bxe_B2011 RND efflux system, outer membrane lipoprotein, NodT family
YP_001563441.1	PFAM: acriflavin resistance protein; KEGG: bxe:Bxe_B2010 cation/multidrug efflux pump, AcrB/AcrD/AcrF family, RND superfamily
YP_001563442.1	PFAM: acriflavin resistance protein; KEGG: bxe:Bxe_B2009 cation/multidrug efflux pump, AcrB/AcrD/AcrF family, RND superfamily
YP_001563443.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bxe:Bxe_B2008 RND efflux pump, membrane fusion protein, CzcB subfamily
YP_001563444.1	KEGG: aav:Aave_4248 N-acetylmuramoyl-L-alanine amidase, family 2
YP_001563445.1	type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH
YP_001563446.1	KEGG: aav:Aave_2200 protein of unknown function DUF339
YP_001563447.1	KEGG: ajs:Ajs_2796 succinate dehydrogenase and fumarate reductase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin
YP_001563448.1	KEGG: ajs:Ajs_2795 succinate dehydrogenase, flavoprotein subunit; TIGRFAM: succinate dehydrogenase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_001563449.1	TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; KEGG: ajs:Ajs_2794 succinate dehydrogenase, cytochrome b subunit
YP_001563450.1	TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: ajs:Ajs_2793 succinate dehydrogenase, cytochrome b subunit
YP_001563451.1	PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: aav:Aave_2205 transcriptional regulator, GntR family
YP_001563452.1	catalyzes the oxidation of malate to oxaloacetate
YP_001563453.1	catalyzes the formation of (E)-3-(methoxycarbonyl)pent-2-enedioate and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and trans-aconitate
YP_001563454.1	PFAM: HpcH/HpaI aldolase; KEGG: aav:Aave_2208 HpcH/HpaI aldolase
YP_001563455.1	KEGG: ajs:Ajs_2788 hypothetical protein
YP_001563456.1	catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate
YP_001563457.1	KEGG: xfa:XF2031 plasmid stabilization protein
YP_001563458.1	PFAM: plasmid stabilization system; KEGG: xfa:XF2032 plasmid stabilization protein
YP_001563460.1	KEGG: eba:ebA2161 hypothetical protein
YP_001563461.1	PFAM: helix-turn-helix domain protein; KEGG: aav:Aave_2212 transcriptional regulator, XRE family
YP_001563462.1	KEGG: aav:Aave_2213 hypothetical protein
YP_001563464.1	Catalyzes the conversion of citrate to isocitrate
YP_001563465.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_1842 transcriptional regulator, LysR family
YP_001563466.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: vei:Veis_1884 acyl-CoA dehydrogenase domain protein
YP_001563467.1	PFAM: conserved hypothetical protein; KEGG: aav:Aave_1840 uncharacterized protein UPF0065
YP_001563468.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: reh:H16_B0089 predicted acyl-CoA transferase/carnitine dehydratase
YP_001563469.1	KEGG: azo:azo0658 hypothetical membrane protein
YP_001563470.1	KEGG: azo:azo0657 hypothetical protein
YP_001563471.1	KEGG: aba:Acid345_0330 hypothetical protein
YP_001563472.1	TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: aav:Aave_1527 4Fe-4S ferredoxin, iron-sulfur binding domain protein
YP_001563473.1	catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis
YP_001563474.1	PFAM: conserved hypothetical protein; KEGG: pol:Bpro_0198 twin-arginine translocation pathway signal
YP_001563475.1	PFAM: Integrase catalytic region; KEGG: ppf:Pput_3520 integrase, catalytic region
YP_001563476.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: reh:H16_B2570 outer membrane receptor for Fe(III)-dicitrate
YP_001563477.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: reu:Reut_B3939 regulatory protein GntR, HTH:aminotransferase, class I and II
YP_001563478.1	KEGG: ajs:Ajs_2784 hypothetical protein
YP_001563479.1	PFAM: peptidase U32; KEGG: ajs:Ajs_2783 peptidase U32
YP_001563480.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_2215 transcriptional regulator, LysR family
YP_001563481.1	PFAM: protein of unknown function DUF81; KEGG: bbr:BB1250 putative membrane protein
YP_001563482.1	TIGRFAM: peptide chain release factor H; PFAM: Class I peptide chain release factor; KEGG: bur:Bcep18194_A4861 class I peptide chain release factor
YP_001563483.1	TIGRFAM: release factor H-coupled RctB family protein; PFAM: protein of unknown function UPF0027; KEGG: pfl:PFL_2087 RtcB protein
YP_001563484.1	TIGRFAM: TonB family protein; protein TolA; PFAM: Tol-Pal system TolA; KEGG: aav:Aave_2225 TonB family protein
YP_001563485.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: ajs:Ajs_2772 biopolymer transport protein ExbD/TolR
YP_001563486.1	TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: ajs:Ajs_2771 MotA/TolQ/ExbB proton channel
YP_001563487.1	TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: ajs:Ajs_2770 4-hydroxybenzoyl-CoA thioesterase
YP_001563488.1	PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aminotransferase class I and II; KEGG: ajs:Ajs_2769 aminotransferase, class I and II
YP_001563489.1	TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: aav:Aave_2230 NusB antitermination factor
YP_001563490.1	RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not
YP_001563491.1	TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: aav:Aave_2232 3,4-dihydroxy-2-butanone 4-phosphate synthase
YP_001563492.1	PFAM: ferredoxin; KEGG: ajs:Ajs_2765 ferredoxin
YP_001563493.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ajs:Ajs_2522 short-chain dehydrogenase/reductase SDR
YP_001563494.1	TIGRFAM: glutamate--cysteine ligase; KEGG: ajs:Ajs_2521 glutamate--cysteine ligase
YP_001563495.1	KEGG: ajs:Ajs_2512 hypothetical protein
YP_001563496.1	KEGG: pna:Pnap_1311 hypothetical protein
YP_001563497.1	PFAM: GTP-binding protein HSR1-related; KEGG: aav:Aave_2270 GTP-binding protein
YP_001563498.1	KEGG: rfr:Rfer_2055 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001563499.1	KEGG: azo:azo1605 probable hippurate hydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein
YP_001563500.1	KEGG: pna:Pnap_1325 phosphoesterase, DHHA1
YP_001563501.1	PFAM: pseudouridine synthase; KEGG: aav:Aave_2278 pseudouridine synthase
YP_001563502.1	KEGG: ajs:Ajs_2757 diaminopimelate dehydrogenase; TIGRFAM: diaminopimelate dehydrogenase; PFAM: dihydrodipicolinate reductase; homoserine dehydrogenase NAD-binding
YP_001563503.1	PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: aav:Aave_2285 major facilitator superfamily MFS_1
YP_001563505.1	PFAM: phospholipase D/Transphosphatidylase; KEGG: rde:RD1_3832 cardiolipin synthase
YP_001563506.1	PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: pen:PSEEN3175 hypothetical protein
YP_001563507.1	KEGG: pol:Bpro_3373 putative lipoprotein
YP_001563508.1	PFAM: peptidase M23B; KEGG: ajs:Ajs_2496 peptidase M23B
YP_001563509.1	KEGG: aav:Aave_1201 hypothetical protein
YP_001563510.1	KEGG: aav:Aave_2295 hypothetical protein
YP_001563511.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bvi:Bcep1808_4224 methyltransferase type 11
YP_001563512.1	catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_001563513.1	KEGG: ajs:Ajs_1609 hypothetical protein
YP_001563514.1	catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis
YP_001563515.1	PFAM: alpha/beta hydrolase fold; KEGG: aav:Aave_2303 alpha/beta hydrolase fold
YP_001563516.1	PFAM: Class I peptide chain release factor; KEGG: ajs:Ajs_1612 class I peptide chain release factor
YP_001563517.1	PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: ajs:Ajs_1613 extradiol ring-cleavage dioxygenase, class III enzyme, subunit B
YP_001563518.1	PFAM: phospholipase/Carboxylesterase; KEGG: ajs:Ajs_1614 phospholipase/carboxylesterase
YP_001563519.1	KEGG: ajs:Ajs_1615 hypothetical protein
YP_001563520.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: aav:Aave_2309 transcriptional regulator, AsnC family
YP_001563521.1	paralogs to the E1 component of pyruvate dehydrogenase subunit E1
YP_001563522.1	PFAM: cytochrome c class I; KEGG: rme:Rmet_2155 cytochrome c, class I
YP_001563523.1	PFAM: protein of unknown function DUF81; KEGG: pen:PSEEN2125 hypothetical protein
YP_001563524.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bch:Bcen2424_3495 transcriptional regulator, LysR family
YP_001563525.1	PFAM: protein of unknown function DUF980; KEGG: aav:Aave_2314 protein of unknown function DUF980
YP_001563526.1	TIGRFAM: UDP-2,3-diacylglucosamine hydrolase; PFAM: metallophosphoesterase; KEGG: ajs:Ajs_1619 UDP-2,3-diacylglucosamine hydrolase
YP_001563527.1	PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: aav:Aave_2316 peptidylprolyl isomerase
YP_001563528.1	PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: ajs:Ajs_1621 peptidylprolyl isomerase
YP_001563529.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: aav:Aave_2319 tetratricopeptide TPR_2 repeat protein
YP_001563530.1	catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA
YP_001563531.1	PFAM: HhH-GPD family protein; KEGG: vei:Veis_4937 HhH-GPD family protein
YP_001563532.1	KEGG: ajs:Ajs_1625 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: acetyl-CoA carboxylase alpha subunit
YP_001563533.1	TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; KEGG: ajs:Ajs_1627 tRNA(Ile)-lysidine synthetase
YP_001563534.1	catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.
YP_001563535.1	PFAM: pseudouridine synthase; KEGG: ajs:Ajs_1183 pseudouridine synthase
YP_001563536.1	KEGG: tcr:507951.150 guanine deaminase; TIGRFAM: guanine deaminase; PFAM: amidohydrolase
YP_001563537.1	PFAM: Xanthine/uracil/vitamin C permease; KEGG: lbr:LVIS_1044 xanthine/uracil permease
YP_001563538.1	PFAM: RNA-binding S4 domain protein; KEGG: aav:Aave_2419 RNA-binding S4 domain protein
YP_001563539.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; KEGG: ajs:Ajs_1640 integral membrane sensor signal transduction histidine kinase
YP_001563540.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: aav:Aave_3012 two component transcriptional regulator, winged helix family
YP_001563541.1	PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_1642 uncharacterized protein UPF0065
YP_001563542.1	KEGG: aav:Aave_3010 hypothetical protein
YP_001563543.1	PFAM: protein of unknown function DUF112 transmembrane; KEGG: ajs:Ajs_1644 protein of unknown function DUF112, transmembrane
YP_001563544.1	TIGRFAM: YD repeat protein; PFAM: RHS protein; YD repeat-containing protein; KEGG: aav:Aave_4283 YD repeat protein
YP_001563545.1	KEGG: ecs:ECs0238 hypothetical protein
YP_001563546.1	KEGG: aav:Aave_3789 putative TIS1421-transposase orfA protein
YP_001563547.1	KEGG: aav:Aave_3790 transposase, IS4 family protein
YP_001563551.1	PFAM: lipolytic protein G-D-S-L family; KEGG: pau:PA14_23690 putative secreted protein
YP_001563552.1	PFAM: regulatory protein ArsR; KEGG: mpt:Mpe_A2424 transcriptional regulator
YP_001563553.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bch:Bcen2424_5529 sigma54 specific transcriptional regulator, fis family
YP_001563554.1	KEGG: xac:XAC4279 hypothetical protein
YP_001563555.1	KEGG: bch:Bcen2424_5344 hypothetical protein
YP_001563556.1	KEGG: sus:Acid_7657 hypothetical protein
YP_001563557.1	KEGG: ajs:Ajs_2446 hypothetical protein
YP_001563558.1	KEGG: ajs:Ajs_2446 hypothetical protein
YP_001563559.1	KEGG: ajs:Ajs_2446 hypothetical protein
YP_001563560.1	KEGG: ajs:Ajs_2446 hypothetical protein
YP_001563561.1	KEGG: aav:Aave_1687 putative transcriptional regulator, XRE family
YP_001563562.1	PFAM: peptidase S24 and S26 domain protein; KEGG: bbr:BB1678 putative phage repressor
YP_001563563.1	KEGG: dar:Daro_1107 hypothetical protein
YP_001563564.1	PFAM: transposase IS3/IS911 family protein; KEGG: ecw:EcE24377A_F0075 IS2, transposase orfA
YP_001563565.1	KEGG: nmu:Nmul_A2405 integrase, catalytic region
YP_001563567.1	PFAM: porin Gram-negative type; KEGG: vei:Veis_0301 porin, gram-negative type
YP_001563568.1	KEGG: aav:Aave_3268 extracellular solute-binding protein, family 1
YP_001563569.1	PFAM: conserved hypothetical protein; KEGG: pna:Pnap_3813 uncharacterized protein UPF0065
YP_001563570.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reu:Reut_B4412 regulatory protein, LysR:LysR, substrate-binding
YP_001563571.1	PFAM: NADPH-dependent FMN reductase; KEGG: rme:Rmet_5075 NADPH-dependent FMN reductase
YP_001563572.1	PFAM: Domain of unknown function DUF1852; KEGG: aav:Aave_2780 hypothetical protein
YP_001563573.1	catalyzes the formation of tetrahydropteroyl-L-glutamate and methionine from L-homocysteine and 5-methyltetrahydropteroyltri-L-glutamate
YP_001563574.1	PFAM: Extracellular ligand-binding receptor; KEGG: vei:Veis_0332 extracellular ligand-binding receptor
YP_001563575.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_0330 ABC transporter related
YP_001563576.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_0329 ABC transporter related
YP_001563577.1	PFAM: inner-membrane translocator; KEGG: vei:Veis_0328 inner-membrane translocator
YP_001563578.1	PFAM: inner-membrane translocator; KEGG: vei:Veis_0326 inner-membrane translocator
YP_001563579.1	KEGG: pol:Bpro_4732 putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane
YP_001563580.1	PFAM: alpha/beta hydrolase fold; KEGG: ajs:Ajs_1646 alpha/beta hydrolase fold
YP_001563581.1	PFAM: Rhodanese domain protein; KEGG: ajs:Ajs_1647 rhodanese domain protein
YP_001563582.1	KEGG: ajs:Ajs_1648 hypothetical protein
YP_001563583.1	PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: ajs:Ajs_1649 protein of unknown function DUF395, YeeE/YedE
YP_001563584.1	PFAM: Rhodanese domain protein; KEGG: ajs:Ajs_1650 rhodanese domain protein
YP_001563585.1	PFAM: ferrochelatase; KEGG: mpt:Mpe_A2495 ferrochelatase
YP_001563586.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: vei:Veis_1575 HAD-superfamily hydrolase, subfamily IA, variant 3
YP_001563587.1	KEGG: vei:Veis_1576 integral membrane protein
YP_001563588.1	KEGG: vei:Veis_1577 hypothetical protein
YP_001563589.1	PFAM: conserved hypothetical protein; KEGG: har:HEAR0415 conserved hypothetical protein; putative exported protein
YP_001563590.1	PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bxe:Bxe_B0974 3-hydroxyisobutyrate dehydrogenase
YP_001563591.1	PFAM: Carboxymuconolactone decarboxylase; KEGG: ret:RHE_PD00115 gamma-carboxymuconolactone decarboxylase protein
YP_001563592.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: acr:Acry_3403 transcriptional regulator, GntR family
YP_001563593.1	PFAM: conserved hypothetical protein; KEGG: aav:Aave_3271 uncharacterized protein UPF0065
YP_001563594.1	TIGRFAM: squalene-associated FAD-dependent desaturase; PFAM: amine oxidase; KEGG: ajs:Ajs_1201 amine oxidase
YP_001563595.1	TIGRFAM: squalene synthase HpnD; PFAM: Squalene/phytoene synthase; KEGG: ajs:Ajs_1202 squalene/phytoene synthase
YP_001563596.1	TIGRFAM: squalene synthase HpnC; PFAM: Squalene/phytoene synthase; KEGG: ajs:Ajs_1205 squalene/phytoene synthase
YP_001563597.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: aav:Aave_1462 efflux transporter, RND family, MFP subunit
YP_001563598.1	PFAM: acriflavin resistance protein; KEGG: aav:Aave_1461 acriflavin resistance protein
YP_001563599.1	PFAM: integrase family protein; KEGG: bbr:BB2185 integrase
YP_001563600.1	PFAM: helix-turn-helix domain protein; KEGG: rso:RSc1447 putative transcription regulator protein
YP_001563601.1	TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein; KEGG: pol:Bpro_0337 HipA-like
YP_001563604.1	PFAM: replication gene A; KEGG: bps:BPSS1052 hypothetical bacteriophage replication protein
YP_001563606.1	PFAM: transcriptional activator Ogr/delta; KEGG: bps:BPSL0138 hypothetical protein
YP_001563608.1	SMART: helix-turn-helix domain protein; KEGG: pna:Pnap_3316 putative transcriptional regulator, XRE family
YP_001563609.1	PFAM: late control D family protein; KEGG: pna:Pnap_3315 phage late control D family protein
YP_001563610.1	PFAM: P2 GpU family protein; KEGG: pna:Pnap_3314 phage P2 GpU family protein
YP_001563611.1	TIGRFAM: phage tail tape measure protein, TP901 family; KEGG: pna:Pnap_3313 phage tail tape measure protein, TP901 family
YP_001563612.1	PFAM: P2 GpE family protein; KEGG: pna:Pnap_3312 phage P2 GpE family protein
YP_001563613.1	PFAM: tail E family protein; KEGG: rso:RSc1916 probable phage-related protein
YP_001563614.1	TIGRFAM: phage major tail tube protein; PFAM: major tail tube protein; KEGG: pna:Pnap_3309 phage major tail tube protein
YP_001563615.1	PFAM: tail sheath protein; KEGG: pna:Pnap_3308 phage tail sheath protein
YP_001563617.1	KEGG: mra:MRA_0288 PE-PGRS family protein
YP_001563619.1	KEGG: mbo:Mb3538 PE-PGRS family protein
YP_001563621.1	KEGG: oan:Oant_1495 virulence-associated protein
YP_001563622.1	KEGG: syf:Synpcc7942_0742 hypothetical protein
YP_001563623.1	KEGG: syf:Synpcc7942_0741 phage tail protein I
YP_001563624.1	PFAM: Baseplate J family protein; KEGG: yps:YPTB1749 probable bacteriophage protein
YP_001563625.1	PFAM: GPW/gp25 family protein; KEGG: csa:Csal_1387 gpW/GP25
YP_001563626.1	TIGRFAM: phage baseplate assembly protein V; PFAM: baseplate assembly protein V; KEGG: stm:STM2710 phage baseplate assembly-like protein
YP_001563627.1	PFAM: P2 phage tail completion R family protein; KEGG: rso:RSc1929 probable tail completion-like protein
YP_001563628.1	KEGG: bpe:BP3355 hypothetical protein
YP_001563629.1	KEGG: aav:Aave_2903 prophage LambdaSo, lysozyme, putative
YP_001563630.1	KEGG: pna:Pnap_3295 hypothetical protein
YP_001563631.1	PFAM: tail X family protein; KEGG: spt:SPA2577 putative phage tail protein
YP_001563633.1	PFAM: integrase family protein; KEGG: bbr:BB2185 integrase
YP_001563634.1	PFAM: helix-turn-helix domain protein; KEGG: rso:RSc1447 putative transcription regulator protein
YP_001563635.1	TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein; KEGG: pol:Bpro_0337 HipA-like
YP_001563638.1	PFAM: replication gene A; KEGG: bps:BPSS1052 hypothetical bacteriophage replication protein
YP_001563640.1	PFAM: transcriptional activator Ogr/delta; KEGG: bps:BPSL0138 hypothetical protein
YP_001563642.1	SMART: helix-turn-helix domain protein; KEGG: pna:Pnap_3316 putative transcriptional regulator, XRE family
YP_001563643.1	PFAM: late control D family protein; KEGG: pna:Pnap_3315 phage late control D family protein
YP_001563644.1	PFAM: P2 GpU family protein; KEGG: pna:Pnap_3314 phage P2 GpU family protein
YP_001563645.1	TIGRFAM: phage tail tape measure protein, TP901 family; KEGG: pna:Pnap_3313 phage tail tape measure protein, TP901 family
YP_001563646.1	PFAM: P2 GpE family protein; KEGG: pna:Pnap_3312 phage P2 GpE family protein
YP_001563647.1	PFAM: tail E family protein; KEGG: rso:RSc1916 probable phage-related protein
YP_001563648.1	TIGRFAM: phage major tail tube protein; PFAM: major tail tube protein; KEGG: pna:Pnap_3309 phage major tail tube protein
YP_001563649.1	PFAM: tail sheath protein; KEGG: pna:Pnap_3308 phage tail sheath protein
YP_001563651.1	KEGG: mra:MRA_0288 PE-PGRS family protein
YP_001563653.1	KEGG: mbo:Mb3538 PE-PGRS family protein
YP_001563655.1	KEGG: oan:Oant_1495 virulence-associated protein
YP_001563656.1	KEGG: syf:Synpcc7942_0742 hypothetical protein
YP_001563657.1	KEGG: syf:Synpcc7942_0741 phage tail protein I
YP_001563658.1	PFAM: Baseplate J family protein; KEGG: yps:YPTB1749 probable bacteriophage protein
YP_001563659.1	PFAM: GPW/gp25 family protein; KEGG: csa:Csal_1387 gpW/GP25
YP_001563660.1	TIGRFAM: phage baseplate assembly protein V; PFAM: baseplate assembly protein V; KEGG: stm:STM2710 phage baseplate assembly-like protein
YP_001563661.1	PFAM: P2 phage tail completion R family protein; KEGG: rso:RSc1929 probable tail completion-like protein
YP_001563662.1	KEGG: bpe:BP3355 hypothetical protein
YP_001563663.1	KEGG: aav:Aave_2903 prophage LambdaSo, lysozyme, putative
YP_001563664.1	KEGG: pna:Pnap_3295 hypothetical protein
YP_001563665.1	PFAM: tail X family protein; KEGG: spt:SPA2577 putative phage tail protein
YP_001563667.1	Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer
YP_001563668.1	KEGG: vei:Veis_4371 ATP-dependent Clp protease, proteolytic subunit ClpP; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: peptidase S14 ClpP
YP_001563669.1	binds and unfolds substrates as part of the ClpXP protease
YP_001563670.1	KEGG: aav:Aave_1457 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_001563671.1	PFAM: peptidase M48 Ste24p; KEGG: bpa:BPP1393 putative lipoprotein
YP_001563672.1	KEGG: ajs:Ajs_2624 hypothetical protein
YP_001563673.1	PFAM: protein of unknown function DUF45; KEGG: ajs:Ajs_2868 protein of unknown function DUF45
YP_001563674.1	KEGG: ajs:Ajs_2867 glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu/hydantoin racemase
YP_001563675.1	PFAM: GCN5-related N-acetyltransferase; KEGG: aav:Aave_3219 GCN5-related N-acetyltransferase
YP_001563676.1	PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mhu:Mhun_2814 UbiE/COQ5 methyltransferase
YP_001563677.1	TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: ajs:Ajs_1056 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha subunit
YP_001563678.1	class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle
YP_001563679.1	PFAM: putative esterase; KEGG: bte:BTH_II1456 esterase, putative
YP_001563680.1	PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_3135 drug resistance transporter, Bcr/CflA subfamily
YP_001563681.1	PFAM: regulatory protein MarR; KEGG: xau:Xaut_1307 transcriptional regulator, MarR family
YP_001563682.1	KEGG: ajs:Ajs_1106 hypothetical protein
YP_001563683.1	PFAM: Putative ParB-like nuclease; KEGG: bte:BTH_I2525 hypothetical protein
YP_001563684.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; sulphate transporter; KEGG: rme:Rmet_4635 sulphate transporter
YP_001563685.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: xcv:XCV2678 transcriptional regulator, LacI family
YP_001563686.1	TIGRFAM: phosphocarrier, HPr family; phosphoenolpyruvate-protein phosphotransferase; PFAM: phosphocarrier HPr protein; PEP-utilizing protein; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: xac:XAC2501 multiphosphoryl transfer protein
YP_001563687.1	KEGG: xcb:XC_1743 1-phosphofructokinase; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein
YP_001563688.1	TIGRFAM: PTS system, fructose-specific, IIB subunnit; PTS system, fructose subfamily, IIC subunit; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS fructose-specific IIB subunit; KEGG: xom:XOO_2652 PTS system fructose-specific IIBC component
YP_001563689.1	with ProVW, part of the high-affinity transport system for the osmoprotectant glycine betaine
YP_001563690.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_1064 binding-protein-dependent transport systems inner membrane component
YP_001563691.1	KEGG: ajs:Ajs_1065 glycine betaine/L-proline ABC transporter, ATPase subunit; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase
YP_001563692.1	PFAM: methylenetetrahydrofolate reductase; KEGG: rme:Rmet_2988 methylenetetrahydrofolate reductase
YP_001563693.1	PFAM: protein of unknown function DUF208; KEGG: rme:Rmet_2989 protein of unknown function DUF208
YP_001563694.1	KEGG: rme:Rmet_2990 transcriptional regulator, LysR family
YP_001563695.1	PFAM: Integrase catalytic region; KEGG: rme:Rmet_2991 integrase, catalytic region
YP_001563696.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: rme:Rmet_2992 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
YP_001563697.1	TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rme:Rmet_2993 phosphonate uptake transporter
YP_001563698.1	TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: rme:Rmet_2994 phosphonate-binding periplasmic protein
YP_001563699.1	KEGG: rme:Rmet_2995 phosphonate ABC transporter PhnC, ATP-binding; TIGRFAM: phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001563700.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rme:Rmet_2996 transcriptional regulator, LysR family
YP_001563701.1	KEGG: rme:Rmet_2997 hypothetical protein
YP_001563702.1	PFAM: transposase Tn3 family protein; KEGG: ppd:Ppro_3845 transposase Tn3 family protein
YP_001563703.1	PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: ppd:Ppro_3846 resolvase, N-terminal domain
YP_001563704.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: ppd:Ppro_3847 RND efflux system, outer membrane lipoprotein, NodT family
YP_001563705.1	KEGG: maq:Maqu_1254 hypothetical protein
YP_001563706.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ppd:Ppro_3849 ABC transporter related
YP_001563707.1	PFAM: protein of unknown function DUF214; KEGG: ppd:Ppro_3850 protein of unknown function DUF214
YP_001563708.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: ppd:Ppro_3851 efflux transporter, RND family, MFP subunit
YP_001563709.1	PFAM: regulatory protein TetR; KEGG: maq:Maqu_1250 transcriptional regulator, TetR family
YP_001563710.1	KEGG: pst:PSPTO_2851 SCO1/SenC family protein
YP_001563711.1	PFAM: protein of unknown function DUF461; KEGG: ajs:Ajs_3343 protein of unknown function DUF461
YP_001563712.1	KEGG: aav:Aave_0736 hypothetical protein
YP_001563713.1	PFAM: conjugation TrbI family protein; KEGG: pau:PA14_30850 TrbI-like protein
YP_001563714.1	TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: pau:PA14_30860 TrbG-like protein
YP_001563715.1	PFAM: Conjugal transfer protein; KEGG: ajs:Ajs_2904 conjugal transfer protein
YP_001563716.1	type IV secretion VirB6 family
YP_001563717.1	KEGG: ajs:Ajs_2906 putative lipoprotein
YP_001563718.1	TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: pau:PA14_30900 TrbJ-like protein
YP_001563719.1	type IV secretion system VirB4 family
YP_001563720.1	KEGG: rme:Rmet_1343 putative conjugal transfer TrbD transmembrane protein
YP_001563721.1	PFAM: Conjugal transfer protein TrbC; KEGG: ajs:Ajs_2910 conjugal transfer protein TrbC
YP_001563722.1	TIGRFAM: P-type conjugative transfer ATPase TrbB; PFAM: type II secretion system protein E; KEGG: ajs:Ajs_2911 type II secretion system protein E
YP_001563723.1	PFAM: CopG domain protein DNA-binding domain protein; KEGG: pau:PA14_30950 hypothetical protein
YP_001563724.1	type IV secretion VirD4 coupling protein family
YP_001563725.1	KEGG: rme:Rmet_1547 putative lipoprotein
YP_001563726.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: shn:Shewana3_1278 transcriptional regulator, LysR family
YP_001563727.1	PFAM: diacylglycerol kinase; KEGG: pol:Bpro_2312 diacylglycerol kinase
YP_001563728.1	PFAM: sulfatase; protein of unknown function DUF1705; KEGG: xft:PD1689 inner membrane protein
YP_001563729.1	KEGG: xcb:XC_3128 hypothetical protein
YP_001563730.1	KEGG: swi:Swit_3710 outer membrane efflux protein
YP_001563731.1	KEGG: azo:azo0269 hypothetical protein
YP_001563732.1	TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: rme:Rmet_3011 heavy metal efflux pump CzcA
YP_001563733.1	TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: rme:Rmet_3012 secretion protein HlyD
YP_001563734.1	PFAM: cytochrome B561; KEGG: rme:Rmet_3013 cytochrome b561
YP_001563735.1	PFAM: protein of unknown function DUF125 transmembrane; KEGG: rme:Rmet_3014 protein of unknown function DUF125, transmembrane
YP_001563736.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rme:Rmet_3015 periplasmic sensor signal transduction histidine kinase
YP_001563737.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rme:Rmet_3016 two component transcriptional regulator, winged helix family
YP_001563738.1	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; FAD-binding 8 domain protein; Ferric reductase domain protein transmembrane component domain; KEGG: rme:Rmet_3017 ferric reductase-like transmembrane component-like
YP_001563739.1	KEGG: pau:PA14_31070 hypothetical protein
YP_001563740.1	KEGG: rme:Rmet_3020 putative conjugal transfer TRAF transmembrane protein
YP_001563741.1	KEGG: rme:Rmet_3021 hypothetical protein
YP_001563742.1	KEGG: rme:Rmet_3022 hypothetical protein
YP_001563743.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: rme:Rmet_3023 cobyrinic acid a,c-diamide synthase
YP_001563744.1	KEGG: rme:Rmet_3024 conserved hypothetical replication initiator and transcription repressor protein
YP_001563745.1	KEGG: rme:Rmet_3025 hypothetical protein
YP_001563746.1	KEGG: net:Neut_2619 hypothetical protein
YP_001563747.1	PFAM: integrase family protein; KEGG: pol:Bpro_1705 phage integrase
YP_001563748.1	PFAM: integrase family protein; KEGG: shn:Shewana3_2916 hypothetical protein
YP_001563749.1	KEGG: pol:Bpro_1703 alpha/beta hydrolase fold
YP_001563750.1	KEGG: rme:Rmet_3026 hypothetical protein
YP_001563751.1	KEGG: rme:Rmet_3027 putative lipoprotein
YP_001563752.1	PFAM: helix-turn-helix domain protein; KEGG: rme:Rmet_3028 transcriptional regulator, XRE family
YP_001563753.1	PFAM: protein of unknown function DUF736; KEGG: rme:Rmet_3029 protein of unknown function DUF736
YP_001563754.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rme:Rmet_3031 GCN5-related N-acetyltransferase
YP_001563755.1	KEGG: rme:Rmet_3032 hypothetical protein
YP_001563756.1	PFAM: ParB domain protein nuclease; KEGG: rme:Rmet_3033 ParB-like nuclease
YP_001563757.1	PFAM: protein of unknown function DUF932; KEGG: rme:Rmet_3034 protein of unknown function DUF932
YP_001563759.1	KEGG: rme:Rmet_3036 hypothetical protein
YP_001563760.1	KEGG: rme:Rmet_3037 hypothetical protein
YP_001563761.1	KEGG: rme:Rmet_3038 hypothetical protein
YP_001563762.1	KEGG: rme:Rmet_3039 beta-lactamase-like protein
YP_001563763.1	PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: rme:Rmet_3040 UBA/ThiF-type NAD/FAD binding fold
YP_001563764.1	KEGG: rme:Rmet_3041 hypothetical protein
YP_001563765.1	KEGG: rme:Rmet_3042 hypothetical protein
YP_001563766.1	KEGG: rme:Rmet_3043 hypothetical protein
YP_001563767.1	PFAM: protein of unknown function DUF1016; KEGG: rme:Rmet_3044 protein of unknown function DUF1016
YP_001563768.1	PFAM: integrase family protein; KEGG: rme:Rmet_3045 phage integrase
YP_001563769.1	PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_1066 uncharacterized protein UPF0114
YP_001563770.1	TIGRFAM: acetate--CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_1067 acetate--CoA ligase
YP_001563771.1	KEGG: aav:Aave_1500 hypothetical protein
YP_001563772.1	PFAM: cytochrome c class I; KEGG: aav:Aave_1504 cytochrome c, class I
YP_001563773.1	KEGG: aav:Aave_1505 hypothetical protein
YP_001563774.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rme:Rmet_5328 RND efflux system, outer membrane lipoprotein, NodT
YP_001563775.1	TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: rme:Rmet_5319 heavy metal efflux pump CzcA
YP_001563776.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bbt:BBta_1545 putative heavy metal efflux pump, HlyD family
YP_001563777.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; KEGG: rso:RSc0549 probable transmembrane sensor histidine kinase transcription regulator protein
YP_001563778.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: azo:azo0975 probable two-component response regulatory protein
YP_001563779.1	catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis
YP_001563780.1	TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein; KEGG: ajs:Ajs_1074 bacterioferritin
YP_001563781.1	catalyzes the conversion of feruloyl-CoA to vanillin and acetyl-CoA
YP_001563782.1	PFAM: CoA-binding domain protein; KEGG: nar:Saro_0674 CoA-binding protein
YP_001563783.1	PFAM: major facilitator superfamily MFS_1; KEGG: swi:Swit_0918 major facilitator superfamily MFS_1
YP_001563784.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ppf:Pput_2404 acyl-CoA dehydrogenase domain protein
YP_001563785.1	PFAM: regulatory protein MarR; KEGG: xcv:XCV0364 transcriptional regulator, MarR family
YP_001563786.1	transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein
YP_001563787.1	PFAM: Malonyl-CoA decarboxylase; KEGG: ajs:Ajs_1077 malonyl-CoA decarboxylase
YP_001563788.1	PFAM: conserved hypothetical protein; KEGG: aav:Aave_1513 uncharacterized protein UPF0065
YP_001563789.1	KEGG: vei:Veis_0487 hypothetical protein
YP_001563790.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: reu:Reut_C5947 regulatory protein GntR, HTH:GntR, C-terminal
YP_001563791.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: vei:Veis_1256 enoyl-CoA hydratase/isomerase
YP_001563792.1	PFAM: conserved hypothetical protein; KEGG: vei:Veis_1257 uncharacterized protein UPF0065
YP_001563793.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: vei:Veis_1258 L-carnitine dehydratase/bile acid-inducible protein F
YP_001563794.1	catalyzes the formation of malonyl-CoA from malonate and CoA
YP_001563795.1	PFAM: UspA domain protein; KEGG: vei:Veis_1173 UspA domain protein
YP_001563796.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: ajs:Ajs_1082 heavy metal translocating P-type ATPase
YP_001563797.1	TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type; KEGG: ajs:Ajs_1083 cytochrome oxidase maturation protein, cbb3-type
YP_001563798.1	CcoN; FixN
YP_001563799.1	CcoO; FixO
YP_001563800.1	PFAM: Cbb3-type cytochrome oxidase component; KEGG: ajs:Ajs_1086 Cbb3-type cytochrome oxidase component
YP_001563801.1	TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; PFAM: cytochrome c class I; KEGG: aav:Aave_1526 cytochrome c oxidase, cbb3-type, subunit III
YP_001563802.1	TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: ajs:Ajs_1088 4Fe-4S ferredoxin, iron-sulfur binding domain protein
YP_001563803.1	KEGG: aav:Aave_1528 hypothetical protein
YP_001563804.1	KEGG: rfr:Rfer_1936 hypothetical protein
YP_001563805.1	PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: ajs:Ajs_1091 putative transcriptional regulator, Crp/Fnr family
YP_001563806.1	catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III
YP_001563807.1	KEGG: aav:Aave_1532 hypothetical protein
YP_001563808.1	TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: aav:Aave_1533 metal dependent phosphohydrolase
YP_001563809.1	KEGG: rfr:Rfer_2629 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001563810.1	PFAM: protein of unknown function DUF81; KEGG: rfr:Rfer_2628 protein of unknown function DUF81
YP_001563811.1	PFAM: protein of unknown function DUF710; KEGG: ajs:Ajs_1094 protein of unknown function DUF710
YP_001563812.1	KEGG: pol:Bpro_2787 hypothetical protein
YP_001563813.1	PFAM: Cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: ajs:Ajs_1097 CobB/CobQ domain protein glutamine amidotransferase
YP_001563814.1	PFAM: cobalbumin biosynthesis protein; KEGG: ajs:Ajs_1098 cobalbumin biosynthesis enzyme
YP_001563815.1	PFAM: periplasmic binding protein; KEGG: pol:Bpro_2782 periplasmic binding protein
YP_001563816.1	PFAM: transport system permease protein; KEGG: pol:Bpro_2781 transport system permease protein
YP_001563817.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pna:Pnap_2362 ABC transporter related
YP_001563818.1	PFAM: aminoglycoside/hydroxyurea antibiotic resistance kinase; KEGG: mms:mma_1889 streptomycin phosphotransferase
YP_001563819.1	PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: rme:Rmet_0343 transcriptional regulator, RpiR family
YP_001563820.1	PFAM: aminotransferase class-III; KEGG: vei:Veis_1705 aminotransferase class-III
YP_001563821.1	PFAM: extracellular solute-binding protein family 3; KEGG: azo:azo0442 putative glutamine-binding protein
YP_001563822.1	KEGG: mbb:BCG_0315A hypothetical protein, antitoxin
YP_001563823.1	TIGRFAM: PIN domain protein family protein; KEGG: mtu:Rv0277c hypothetical protein
YP_001563824.1	KEGG: rfr:Rfer_1038 Asp/Glu racemase
YP_001563825.1	KEGG: rfr:Rfer_2618 cob(I)alamin adenosyltransferase; TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
YP_001563826.1	TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase; KEGG: pol:Bpro_2763 cob(II)yrinic acid a,c-diamide reductase
YP_001563827.1	TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; KEGG: ajs:Ajs_3180 cobalamin biosynthesis protein CobD
YP_001563828.1	PFAM: aminotransferase class I and II; KEGG: ajs:Ajs_3179 aminotransferase, class I and II
YP_001563829.1	TIGRFAM: cobyric acid synthase CobQ; PFAM: Cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: aav:Aave_1552 cobyric acid synthase CobQ
YP_001563830.1	KEGG: aav:Aave_0439 hypothetical protein
YP_001563831.1	KEGG: aav:Aave_3896 hypothetical protein
YP_001563832.1	PFAM: Xylose isomerase domain protein TIM barrel; KEGG: vei:Veis_2462 hydroxypyruvate isomerase
YP_001563833.1	PFAM: type III effector Hrp-dependent outers; KEGG: pol:Bpro_4878 type III effector Hrp-dependent outers
YP_001563834.1	PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: rfr:Rfer_0446 3-hydroxyisobutyrate dehydrogenase
YP_001563835.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KR domain protein; KEGG: bur:Bcep18194_B0473 NAD-dependent epimerase/dehydratase
YP_001563836.1	PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B0475 major facilitator superfamily (MFS_1) transporter
YP_001563837.1	PFAM: class II aldolase/adducin family protein; KEGG: bxe:Bxe_B2170 putative L-fuculose phosphate aldolase
YP_001563838.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: rfr:Rfer_0447 GntR-like
YP_001563839.1	KEGG: ajs:Ajs_3176 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase
YP_001563840.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bbr:BB2428 putative GntR-family transcriptional regulator
YP_001563841.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bch:Bcen2424_4519 GCN5-related N-acetyltransferase
YP_001563842.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pol:Bpro_0586 transcriptional regulator, LysR family
YP_001563843.1	PFAM: conserved hypothetical protein; KEGG: pol:Bpro_0585 uncharacterized protein UPF0065
YP_001563844.1	PFAM: regulatory protein LuxR; KEGG: pau:PA14_10980 hypothetical protein
YP_001563845.1	KEGG: rha:RHA1_ro05126 hypothetical protein
YP_001563846.1	PFAM: conserved hypothetical protein; KEGG: rme:Rmet_3983 uncharacterized protein UPF0065
YP_001563847.1	KEGG: aav:Aave_1562 endonuclease III; TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; SMART: iron-sulfur cluster loop
YP_001563848.1	PFAM: protein of unknown function DUF1016; KEGG: bur:Bcep18194_B0261 protein of unknown function DUF1016
YP_001563849.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_B2306 transcriptional regulator, LysR-family
YP_001563850.1	catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia
YP_001563851.1	PFAM: conserved hypothetical protein; KEGG: reh:H16_B2308 probable extra-cytoplasmic solute receptor
YP_001563852.1	PFAM: aminotransferase class I and II; KEGG: ajs:Ajs_3169 putative transcriptional regulator, GntR family
YP_001563853.1	PFAM: SlyX family protein; KEGG: ajs:Ajs_3168 SlyX family protein
YP_001563855.1	TIGRFAM: amidohydrolase; PFAM: peptidase dimerisation domain protein; KEGG: bur:Bcep18194_C6529 peptidase M20D, amidohydrolase
YP_001563856.1	PFAM: conserved hypothetical protein; KEGG: reh:H16_A3650 probable extra-cytoplasmic solute receptor
YP_001563857.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_A3224 transcriptional regulator, LysR-family
YP_001563858.1	KEGG: vei:Veis_4884 hypothetical protein
YP_001563859.1	specific inhibitor of chromosomal initiation of replication in vitro; inds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport
YP_001563860.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: ajs:Ajs_3161 lysine exporter protein (LysE/YggA)
YP_001563862.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: mlo:mll7935 transcriptional regulator
YP_001563863.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: pna:Pnap_4738 protein of unknown function DUF6, transmembrane
YP_001563864.1	TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: ajs:Ajs_3160 lipoprotein, YaeC family
YP_001563865.1	KEGG: tcx:Tcr_1006 hypothetical protein
YP_001563866.1	PFAM: aminotransferase class V; regulatory protein GntR HTH; aminotransferase class I and II; KEGG: pfl:PFL_2406 transcriptional regulator, GntR family/aminotransferase, classes I and II family protein
YP_001563867.1	PFAM: thioesterase superfamily protein; KEGG: mms:mma_1704 hypothetical protein
YP_001563868.1	KEGG: lma:LmjF35.0290 hypothetical protein, conserved
YP_001563869.1	KEGG: aav:Aave_1576 phosphoserine phosphatase SerB; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase subfamily IB hypothetical 1; Haloacid dehalogenase domain protein hydrolase type 3
YP_001563870.1	KEGG: ajs:Ajs_3158 hypothetical protein
YP_001563871.1	KEGG: ajs:Ajs_3157 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases
YP_001563872.1	TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: ajs:Ajs_3156 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
YP_001563873.1	KEGG: ajs:Ajs_3155 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase
YP_001563874.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: aav:Aave_1583 integral membrane sensor signal transduction histidine kinase
YP_001563875.1	part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation
YP_001563876.1	PFAM: protein of unknown function DUF541; KEGG: ajs:Ajs_3152 protein of unknown function DUF541
YP_001563877.1	catalyzes the formation of acetoacetate from 3-hydroxybutyrate
YP_001563878.1	PFAM: alpha/beta hydrolase fold; KEGG: aav:Aave_1587 alpha/beta hydrolase fold
YP_001563879.1	KEGG: aav:Aave_1588 (p)ppGpp synthetase I, SpoT/RelA; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; RelA/SpoT domain protein
YP_001563880.1	KEGG: dge:Dgeo_0531 hypothetical protein
YP_001563881.1	KEGG: ade:Adeh_1212 hypothetical protein
YP_001563882.1	PFAM: GCN5-related N-acetyltransferase; KEGG: ecv:APECO1_667 spermidine N1-acetyltransferase
YP_001563883.1	PFAM: regulatory protein TetR; Tetracycline transcriptional regulator YcdC domain protein; KEGG: vei:Veis_4153 transcriptional regulator, TetR family
YP_001563884.1	glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate
YP_001563885.1	catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines
YP_001563886.1	TIGRFAM: NCS1 nucleoside transporter family; PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: bur:Bcep18194_C6657 cytosine/purines, uracil, thiamine, allantoin transporter
YP_001563887.1	catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position
YP_001563888.1	KEGG: aav:Aave_0970 amidase, hydantoinase/carbamoylase family; TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20; peptidase dimerisation domain protein
YP_001563889.1	TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR; PFAM: PHB accumulation regulatory domain protein; PHA accumulation regulator DNA-binding protein; KEGG: ajs:Ajs_3148 polyhydroxyalkonate synthesis repressor, PhaR
YP_001563890.1	catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit
YP_001563891.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ajs:Ajs_1889 alcohol dehydrogenase GroES domain protein
YP_001563892.1	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: nwi:Nwi_0162 multi antimicrobial extrusion protein MatE
YP_001563893.1	KEGG: pae:PA3765 hypothetical protein
YP_001563894.1	Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA
YP_001563895.1	KEGG: ajs:Ajs_2874 hypothetical protein
YP_001563896.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_2873 transcriptional regulator, LysR family
YP_001563897.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: ajs:Ajs_2872 L-carnitine dehydratase/bile acid-inducible protein F
YP_001563898.1	PFAM: pyruvate carboxyltransferase; KEGG: aav:Aave_1652 pyruvate carboxyltransferase
YP_001563899.1	PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_2869 uncharacterized protein UPF0065
YP_001563900.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
YP_001563901.1	KEGG: ajs:Ajs_2622 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase
YP_001563902.1	PFAM: histone family protein DNA-binding protein; KEGG: ajs:Ajs_2621 histone family protein DNA-binding protein
YP_001563903.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: ajs:Ajs_2620 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_001563904.1	KEGG: reh:H16_A0415 type IV pilus transmembrane protein FimT
YP_001563905.1	TIGRFAM: type IV pilus modification protein PilV; KEGG: pap:PSPA7_5191 type IV pilus modification protein PilV
YP_001563906.1	KEGG: pmy:Pmen_0960 Tfp pilus assembly protein PilW-like protein
YP_001563907.1	KEGG: psa:PST_0971 type 4 fimbrial biogenesis protein PilX
YP_001563908.1	KEGG: xft:PD1611 fimbrial assembly protein
YP_001563909.1	KEGG: pmy:Pmen_0957 Tfp pilus assembly protein PilE-like protein
YP_001563910.1	PFAM: isochorismatase hydrolase; KEGG: pae:PA2419 probable hydrolase
YP_001563911.1	PFAM: isochorismatase hydrolase; KEGG: cko:CKO_02173 hypothetical protein
YP_001563912.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bmn:BMA10247_1774 transcriptional regulator, LysR family
YP_001563913.1	PFAM: protein of unknown function DUF461; KEGG: rfr:Rfer_0618 protein of unknown function DUF461
YP_001563914.1	KEGG: dar:Daro_0198 hypothetical protein
YP_001563915.1	PFAM: Di-haem cytochrome c peroxidase; KEGG: lil:LA2974 methylamine utilization protein mauG
YP_001563916.1	KEGG: mxa:MXAN_0976 putative lipoprotein
YP_001563918.1	PFAM: protein of unknown function DUF461; KEGG: ajs:Ajs_3343 protein of unknown function DUF461
YP_001563919.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: aav:Aave_4448 TonB-dependent receptor
YP_001563920.1	KEGG: aav:Aave_4449 hypothetical protein
YP_001563921.1	KEGG: vei:Veis_4741 hypothetical protein
YP_001563922.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mms:mma_0066 TonB-dependent receptor
YP_001563923.1	KEGG: xac:XAC4326 urea amidolyase
YP_001563924.1	KEGG: aav:Aave_1797 peptidase M14, carboxypeptidase A
YP_001563925.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: ajs:Ajs_2609 DEAD/DEAH box helicase domain protein
YP_001563926.1	ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence
YP_001563927.1	KEGG: aav:Aave_1802 hypothetical protein
YP_001563928.1	PFAM: monooxygenase FAD-binding; KEGG: reu:Reut_B3601 salicylate 1-monooxygenase
YP_001563929.1	PFAM: peptidase S58 DmpA; KEGG: ajs:Ajs_2605 peptidase S58, DmpA
YP_001563930.1	KEGG: ajs:Ajs_2603 hypothetical protein
YP_001563931.1	PFAM: protein of unknown function DUF411; KEGG: ajs:Ajs_2602 protein of unknown function DUF411
YP_001563932.1	PFAM: blue (type 1) copper domain protein; KEGG: ajs:Ajs_2601 blue (type 1) copper domain protein
YP_001563933.1	PFAM: multicopper oxidase type 2; multicopper oxidase type 3; KEGG: ajs:Ajs_2600 multicopper oxidase, type 3
YP_001563934.1	KEGG: ajs:Ajs_2599 copper tolerance protein
YP_001563935.1	KEGG: ajs:Ajs_2598 hypothetical protein
YP_001563936.1	KEGG: ajs:Ajs_2597 hypothetical protein
YP_001563937.1	KEGG: ajs:Ajs_2595 hypothetical protein
YP_001563938.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: ajs:Ajs_2594 heavy metal translocating P-type ATPase
YP_001563939.1	PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: ajs:Ajs_2593 putative transcriptional regulator, MerR family
YP_001563940.1	KEGG: ajs:Ajs_2592 ABC-type transport system ipermease component
YP_001563941.1	PFAM: Mammalian cell entry related domain protein; KEGG: aav:Aave_1818 mammalian cell entry related domain protein
YP_001563942.1	KEGG: ajs:Ajs_2590 hypothetical protein
YP_001563943.1	PFAM: porin Gram-negative type; KEGG: aav:Aave_1125 porin, gram-negative type
YP_001563944.1	PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: ajs:Ajs_0011 two component transcriptional regulator, LuxR family
YP_001563945.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: ajs:Ajs_0010 multi-sensor hybrid histidine kinase
YP_001563946.1	PFAM: sodium:dicarboxylate symporter; KEGG: ajs:Ajs_0009 sodium:dicarboxylate symporter
YP_001563947.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rso:RSc1248 hypothetical protein
YP_001563948.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rso:RSc1246 putative oxidoreductase myo-inositol 2-dehydrogenase signal peptide protein
YP_001563949.1	PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rso:RSc1245 putative protein implicated in myo-inositol catabolique pathway
YP_001563950.1	PFAM: Xylose isomerase domain protein TIM barrel; KEGG: bur:Bcep18194_A4571 xylose isomerase-like TIM barrel
YP_001563951.1	PFAM: inner-membrane translocator; KEGG: rso:RSc1243 probable sugar transmembrane ABC transporter protein
YP_001563952.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_1305 ABC transporter related
YP_001563953.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: rso:RSc1241 putative rhizopine-binding precursor signal peptide protein
YP_001563954.1	PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: rso:RSc1239 putative acetolactate synthase protein
YP_001563955.1	PFAM: Xylose isomerase domain protein TIM barrel; KEGG: bvi:Bcep1808_1385 xylose isomerase domain protein TIM barrel
YP_001563956.1	PFAM: porin Gram-negative type; KEGG: rso:RSc1236 probable outer membrane porin lipoprotein transmembrane
YP_001563957.1	KEGG: pen:PSEEN2966 hypothetical protein
YP_001563958.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_0103 acyl-CoA dehydrogenase domain protein
YP_001563959.1	KEGG: xau:Xaut_1752 cell morphology protein
YP_001563960.1	PFAM: AMP-dependent synthetase and ligase; KEGG: bbr:BB4380 putative D-alanine-D-alanyl carrier protein ligase
YP_001563961.1	PFAM: phosphopantetheine-binding; KEGG: bpa:BPP3911 acyl carrier protein
YP_001563962.1	PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: aba:Acid345_4412 membrane bound O-acyl transferase, MBOAT
YP_001563963.1	KEGG: xau:Xaut_1750 cell morphology protein
YP_001563964.1	KEGG: xau:Xaut_1749 hypothetical protein
YP_001563965.1	PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: mms:mma_2622 hypothetical protein
YP_001563966.1	KEGG: mms:mma_2623 bacteriophage N4 adsorption protein B
YP_001563967.1	KEGG: psp:PSPPH_1082 hypothetical protein
YP_001563968.1	PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: mms:mma_2625 UDP-N-acetylglucosamine 2-epimerase
YP_001563969.1	KEGG: mxa:MXAN_3435 hypothetical protein
YP_001563971.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: cbe:Cbei_2655 TPR repeat-containing protein
YP_001563972.1	PFAM: major facilitator superfamily MFS_1; KEGG: aav:Aave_2534 major facilitator superfamily MFS_1
YP_001563973.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_2533 transcriptional regulator, LysR family
YP_001563974.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rso:RS00872 probable extracytoplasmic function sigma factor transcription regulator protein
YP_001563975.1	PFAM: FecR protein; KEGG: pau:PA14_46650 putative transmembrane sensor
YP_001563976.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: reh:H16_A3182 outer membrane receptor, TonB dependent
YP_001563977.1	KEGG: aav:Aave_3958 hypothetical protein
YP_001563978.1	KEGG: aav:Aave_3397 hypothetical protein
YP_001563979.1	KEGG: mes:Meso_1904 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001563980.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; SMART: AAA ATPase; KEGG: smd:Smed_4035 GAF modulated sigma54 specific transcriptional regulator, fis family
YP_001563981.1	KEGG: atc:AGR_L_284 flavin-containing monooxygenase, putative
YP_001563982.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: aci:ACIAD1021 putative (R,R)-butanediol dehydrogenase
YP_001563983.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pap:PSPA7_2229 probable transcriptional regulator
YP_001563984.1	PFAM: 4-oxalocrotonate tautomerase; KEGG: azo:azo2359 oxaloacetate tautomerase
YP_001563985.1	PFAM: band 7 protein; KEGG: aav:Aave_3259 band 7 protein
YP_001563986.1	PFAM: protein of unknown function DUF107; KEGG: aav:Aave_3258 protein of unknown function DUF107
YP_001563987.1	PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: ajs:Ajs_2762 lysine decarboxylase
YP_001563988.1	PFAM: conserved hypothetical protein; KEGG: reu:Reut_B4957 hypothetical protein
YP_001563989.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: pol:Bpro_4514 pyruvate carboxyltransferase
YP_001563990.1	PFAM: pyruvate carboxyltransferase; KEGG: pna:Pnap_3685 pyruvate carboxyltransferase
YP_001563991.1	PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: pol:Bpro_4515 transcriptional regulator, IclR family
YP_001563992.1	PFAM: zinc/iron permease; KEGG: aav:Aave_2663 zinc/iron permease
YP_001563993.1	PFAM: manganese and iron superoxide dismutase; KEGG: aav:Aave_2662 superoxide dismutase
YP_001563994.1	KEGG: asa:ASA_3720 hypothetical protein
YP_001563995.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ajs:Ajs_1809 short-chain dehydrogenase/reductase SDR
YP_001563996.1	PFAM: extracellular solute-binding protein family 5; KEGG: ajs:Ajs_1810 extracellular solute-binding protein, family 5
YP_001563997.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_1811 binding-protein-dependent transport systems inner membrane component
YP_001563998.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_1812 binding-protein-dependent transport systems inner membrane component
YP_001563999.1	PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: ajs:Ajs_1813 ABC transporter related
YP_001564000.1	PFAM: Lipocalin family protein; KEGG: aav:Aave_3140 lipocalin family protein
YP_001564001.1	KEGG: aav:Aave_0776 hypothetical protein
YP_001564002.1	KEGG: net:Neut_2619 hypothetical protein
YP_001564003.1	PFAM: integrase family protein; KEGG: pol:Bpro_1705 phage integrase
YP_001564004.1	PFAM: integrase family protein; KEGG: shn:Shewana3_2916 hypothetical protein
YP_001564005.1	KEGG: pol:Bpro_1703 alpha/beta hydrolase fold
YP_001564006.1	KEGG: ajs:Ajs_0638 transcriptional regulatory protein, MerR family
YP_001564007.1	PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: ajs:Ajs_0639 heat shock protein DnaJ domain protein
YP_001564008.1	KEGG: aav:Aave_3388 cytochrome c553-like protein
YP_001564009.1	PFAM: cytochrome c class I; KEGG: aav:Aave_3387 cytochrome c, class I
YP_001564010.1	PFAM: Thioredoxin domain; KEGG: aav:Aave_3386 hypothetical protein
YP_001564011.1	PFAM: protein of unknown function DUF150; KEGG: aav:Aave_3385 protein of unknown function DUF150
YP_001564012.1	KEGG: aav:Aave_3384 NusA antitermination factor; TIGRFAM: transcription termination factor NusA; PFAM: RNA binding S1 domain protein; KH type 1 domain protein; NusA domain protein; SMART: KH domain protein
YP_001564013.1	Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
YP_001564014.1	associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock
YP_001564015.1	catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs
YP_001564016.1	TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: ajs:Ajs_2558 GTP-binding protein TypA
YP_001564017.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_B0708 transcriptional regulator, LysR-family
YP_001564018.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: ajs:Ajs_0058 L-carnitine dehydratase/bile acid-inducible protein F
YP_001564019.1	KEGG: ajs:Ajs_0059 hypothetical protein
YP_001564020.1	PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0060 uncharacterized protein UPF0065
YP_001564021.1	catalyzes the formation of 3-hydroxy-2-methylpropanoate from 3-hydroxy-2-methylpropanoyl-CoA
YP_001564022.1	PFAM: regulatory protein TetR; KEGG: asa:ASA_1100 transcriptional regulator, TetR family
YP_001564023.1	KEGG: asa:ASA_1101 hypothetical protein
YP_001564024.1	KEGG: ajs:Ajs_2555 putative transmembrane anti-sigma factor
YP_001564025.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: ajs:Ajs_2554 RNA polymerase, sigma-24 subunit, ECF subfamily
YP_001564026.1	PFAM: Secreted repeat of unknown function; KEGG: ajs:Ajs_2553 secreted repeat of unknown function
YP_001564027.1	binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation
YP_001564028.1	PFAM: cyclase/dehydrase; KEGG: aav:Aave_3373 cyclase/dehydrase
YP_001564029.1	PFAM: protein of unknown function UPF0125; KEGG: aav:Aave_3372 protein of unknown function UPF0125
YP_001564030.1	KEGG: ajs:Ajs_2549 hypothetical protein
YP_001564031.1	KEGG: ajs:Ajs_2548 inosine-5'-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain containing protein; IMP dehydrogenase/GMP reductase; 2-nitropropane dioxygenase NPD
YP_001564032.1	catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis
YP_001564033.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rfr:Rfer_1922 transcriptional regulator, LysR family
YP_001564034.1	TIGRFAM: prevent-host-death family protein; KEGG: aav:Aave_3369 prevent-host-death family protein
YP_001564035.1	KEGG: aav:Aave_3368 hypothetical protein
YP_001564036.1	contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway
YP_001564038.1	PFAM: peptidase M16 domain protein; KEGG: aav:Aave_3753 peptidase M16 domain protein
YP_001564040.1	PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0462 uncharacterized protein UPF0065
YP_001564041.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_0139 transcriptional regulator, LysR family
YP_001564042.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: kpn:KPN_04023 hypothetical protein
YP_001564043.1	TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: gvi:gll2260 probable oxidoreductase
YP_001564044.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: cvi:CV_2245 flavoprotein NADH-dependent oxidoreductase
YP_001564045.1	PFAM: bifunctional deaminase-reductase domain protein; KEGG: ajs:Ajs_2025 bifunctional deaminase-reductase domain protein
YP_001564046.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bbr:BB4796 LysR-family transcriptional regulator
YP_001564047.1	PFAM: 4-hydroxyphenylacetate 3-hydroxylase; KEGG: rha:RHA1_ro01782 probable 4-hydroxyphenylacetic hydroxylase
YP_001564048.1	PFAM: Extracellular ligand-binding receptor; KEGG: pol:Bpro_3336 extracellular ligand-binding receptor
YP_001564049.1	PFAM: inner-membrane translocator; KEGG: pol:Bpro_3335 inner-membrane translocator
YP_001564050.1	PFAM: inner-membrane translocator; KEGG: maq:Maqu_3337 inner-membrane translocator
YP_001564051.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tth:TTC0969 branched-chain amino acid transport ATP-binding protein livG
YP_001564052.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tma:TM1139 branched-chain amino acid transport system ATP-binding protein
YP_001564053.1	KEGG: pap:PSPA7_6179 hypothetical protein
YP_001564054.1	PFAM: Endoribonuclease L-PSP; KEGG: pap:PSPA7_6178 hypothetical protein
YP_001564055.1	PFAM: protein of unknown function DUF1028; KEGG: bxe:Bxe_A3464 hypothetical protein
YP_001564056.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_A1196 transcriptional regulator, LysR-family
YP_001564057.1	PFAM: beta-lactamase; KEGG: reh:H16_A1195 beta-lactamase
YP_001564058.1	PFAM: major facilitator superfamily MFS_1; KEGG: spc:Sputcn32_1816 major facilitator superfamily MFS_1
YP_001564059.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; KEGG: aav:Aave_2925 response regulator receiver modulated diguanylate cyclase/phosphodiesterase
YP_001564060.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: aav:Aave_2926 diguanylate cyclase
YP_001564061.1	KEGG: aav:Aave_2927 putative lipoprotein
YP_001564062.1	KEGG: aav:Aave_2928 hypothetical protein
YP_001564063.1	PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: aav:Aave_2929 serine phosphatase
YP_001564064.1	PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: bur:Bcep18194_B2065 taurine dioxygenase
YP_001564065.1	KEGG: aav:Aave_3397 hypothetical protein
YP_001564066.1	KEGG: aav:Aave_0374 putative mRNA 3-end processing factor
YP_001564067.1	catalyzes the ATP-dependent formation of a phosphodiester at the site of a single strand break in duplex DNA
YP_001564068.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein; SMART: DEAD-like helicases; KEGG: aav:Aave_0376 DEAD/H associated domain protein
YP_001564069.1	KEGG: aav:Aave_0377 metallophosphoesterase
YP_001564070.1	KEGG: bam:Bamb_4262 hypothetical protein
YP_001564071.1	PFAM: Mg2 transporter protein CorA family protein; KEGG: mms:mma_2655 cation transporter (MIT family)
YP_001564072.1	PFAM: protein of unknown function DUF112 transmembrane; KEGG: rme:Rmet_5627 protein of unknown function DUF112, transmembrane
YP_001564073.1	KEGG: mms:mma_0439 small permease component of tripartite tricarboxylate transporter
YP_001564074.1	PFAM: conserved hypothetical protein; KEGG: rme:Rmet_5629 uncharacterized protein UPF0065
YP_001564075.1	PFAM: aminotransferase class V; KEGG: pol:Bpro_2753 aminotransferase, class V
YP_001564076.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pol:Bpro_2754 transcriptional regulator, GntR family
YP_001564077.1	PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; FAD linked oxidase domain protein; KEGG: pol:Bpro_2755 D-lactate dehydrogenase (cytochrome)
YP_001564078.1	PFAM: protein of unknown function DUF336; KEGG: ajs:Ajs_2410 protein of unknown function DUF336
YP_001564079.1	PFAM: outer membrane efflux protein; KEGG: pau:PA14_10330 putative outer membrane protein precursor
YP_001564080.1	PFAM: ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase; KEGG: xom:XOO_1681 colicin V secretion ABC transporter ATP-binding protein
YP_001564081.1	KEGG: rbe:RBE_0376 hypothetical protein
YP_001564082.1	PFAM: Cupin 4 family protein; SMART: transcription factor jumonji jmjC domain protein; KEGG: nmc:NMC0891 hypothetical protein
YP_001564083.1	PFAM: Radical SAM domain protein; KEGG: rpc:RPC_3241 radical SAM
YP_001564084.1	PFAM: secretion protein HlyD family protein; KEGG: mpt:Mpe_A3794 membrane-fusion protein
YP_001564085.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pol:Bpro_2754 transcriptional regulator, GntR family
YP_001564086.1	PFAM: transglutaminase domain protein; KEGG: aav:Aave_3990 transglutaminase domain protein
YP_001564087.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: aav:Aave_1367 TonB-dependent siderophore receptor
YP_001564088.1	KEGG: ret:RHE_CH02944 hypothetical protein
YP_001564089.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: rme:Rmet_0007 transcriptional regulator, AraC family
YP_001564090.1	TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: mpt:Mpe_A2526 CHR transporter
YP_001564091.1	TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; KEGG: ret:RHE_PE00011 peptide methionine sulfoxide reductase protein
YP_001564092.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; cytochrome c biogenesis protein transmembrane region; Redoxin domain protein; KEGG: bch:Bcen2424_6244 cytochrome c biogenesis protein, transmembrane region
YP_001564093.1	TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; KEGG: bra:BRADO5066 peptide methionine sulfoxide reductase MsrB
YP_001564094.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bur:Bcep18194_C6809 two component transcriptional regulator, winged helix family
YP_001564095.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bam:Bamb_5784 periplasmic sensor signal transduction histidine kinase
YP_001564096.1	PFAM: ferredoxin-dependent glutamate synthase; KEGG: mpt:Mpe_A3620 putative glutamate synthase
YP_001564097.1	KEGG: reh:H16_B1678 hypothetical protein
YP_001564098.1	PFAM: PepSY-associated TM helix domain protein; KEGG: reh:H16_B1677 iron regulated protein
YP_001564099.1	KEGG: sbm:Shew185_4236 hypothetical protein
YP_001564100.1	KEGG: rca:Rcas_3732 parallel beta-helix repeat
YP_001564101.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pfl:PFL_3635 sensor histidine kinase/response regulator
YP_001564102.1	PFAM: EAL domain protein; response regulator receiver; KEGG: pfl:PFL_3636 response regulator/EAL domain protein
YP_001564103.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pfl:PFL_3637 sensor histidine kinase/response regulator
YP_001564104.1	PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: mms:mma_0618 positive response regulator for colanic capsule biosynthesis
YP_001564107.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: rso:RSc3136 putative methyl-accepting chemotaxis transmembrane protein
YP_001564108.1	KEGG: pae:PA0092 hypothetical protein
YP_001564110.1	PFAM: BRO domain protein; KEGG: stp:Strop_4013 BRO domain protein domain protein
YP_001564111.1	KEGG: sal:Sala_1435 hypothetical protein
YP_001564112.1	PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: hsa:84000 transmembrane protease, serine 13
YP_001564113.1	PFAM: transposase IS3/IS911 family protein; KEGG: pna:Pnap_4532 transposase IS3/IS911 family protein
YP_001564114.1	PFAM: IS66 Orf2 family protein; KEGG: reu:Reut_C6378 IS66 Orf2 like
YP_001564115.1	PFAM: transposase IS66; KEGG: pna:Pnap_2521 transposase IS66
YP_001564116.1	TIGRFAM: yecA family protein; PFAM: SEC-C motif domain protein; KEGG: bvi:Bcep1808_2979 YecA family protein
YP_001564117.1	KEGG: aav:Aave_3790 transposase, IS4 family protein
YP_001564118.1	KEGG: aav:Aave_3789 putative TIS1421-transposase orfA protein
YP_001564119.1	PFAM: protein of unknown function DUF1353; KEGG: sse:Ssed_2204 hypothetical protein
YP_001564120.1	PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: net:Neut_1623 N-acetylmuramoyl-L-alanine amidase, family 2
YP_001564122.1	PFAM: helix-turn-helix- domain containing protein AraC type; transcription activator effector binding; KEGG: pfl:PFL_1558 transcriptional regulator, AraC family
YP_001564123.1	PFAM: helix-turn-helix HxlR type; KEGG: bch:Bcen2424_3397 transcriptional regulator, HxlR family
YP_001564124.1	PFAM: Glutathione S-transferase domain; KEGG: reh:H16_B0451 glutathione S-transferase
YP_001564126.1	KEGG: xcb:XC_0115 hypothetical protein
YP_001564127.1	PFAM: regulatory protein LuxR; KEGG: bvi:Bcep1808_3676 response regulator receiver protein
YP_001564128.1	PFAM: regulatory protein MarR; KEGG: eca:ECA2036 regulatory protein
YP_001564129.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: eca:ECA2035 regulatory protein
YP_001564130.1	PFAM: nitroreductase; KEGG: hch:HCH_03586 nitroreductase
YP_001564131.1	PFAM: bifunctional deaminase-reductase domain protein; KEGG: pfl:PFL_3631 RibD C-terminal domain
YP_001564132.1	PFAM: regulatory protein TetR; KEGG: pfl:PFL_3630 hypothetical protein
YP_001564134.1	Inhibits transcription at high concentrations of nickel
YP_001564135.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: azo:azo2217 putative TonB-dependent receptor
YP_001564136.1	KEGG: azo:azo2218 putative cobalt transport system, periplasmic-binding protein
YP_001564137.1	PFAM: conserved hypothetical protein; KEGG: vei:Veis_1031 uncharacterized protein UPF0065
YP_001564138.1	PFAM: sulfatase; KEGG: bbr:BB1025 probable sulfatase
YP_001564139.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bbr:BB1024 LysR-family transcriptional regulator
YP_001564140.1	catalyzes the oxidative deamination of D-amino acids
YP_001564141.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: bbr:BB3050 leucine-responsive regulatory protein
YP_001564142.1	TIGRFAM: conserved repeat domain protein; PFAM: protein of unknown function DUF11; KEGG: rca:Rcas_0471 conserved repeat domain
YP_001564143.1	PFAM: metallophosphoesterase; KEGG: aav:Aave_3458 metallophosphoesterase
YP_001564144.1	PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: aav:Aave_3457 ABC transporter-related protein
YP_001564145.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_3456 binding-protein-dependent transport systems inner membrane component
YP_001564146.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_3455 binding-protein-dependent transport systems inner membrane component
YP_001564147.1	PFAM: extracellular solute-binding protein family 1; KEGG: aav:Aave_3454 putative periplasmic solute-binding protein
YP_001564148.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: aav:Aave_3453 transcriptional regulator, LacI family
YP_001564149.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_0212 transcriptional regulator, LysR family
YP_001564150.1	PFAM: conserved hypothetical protein; KEGG: bbr:BB2823 hypothetical protein
YP_001564151.1	PFAM: intradiol ring-cleavage dioxygenase; KEGG: bja:blr0926 catechol 1,2-dioxygenase
YP_001564152.1	KEGG: pol:Bpro_0971 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; TIGRFAM: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; PFAM: Hydratase/decarboxylase
YP_001564153.1	PFAM: DNA polymerase beta domain protein region; KEGG: pfl:PFL_2430 hypothetical protein
YP_001564154.1	TIGRFAM: gluconate transporter; PFAM: Gluconate transporter; Citrate transporter; KEGG: ppf:Pput_0685 gluconate transporter
YP_001564155.1	stimulates the activities of the other two initiation factors, IF-2 and IF-3
YP_001564156.1	TIGRFAM: pentapeptide MXKDX repeat protein; KEGG: pol:Bpro_0540 hypothetical protein
YP_001564157.1	PFAM: oxidoreductase molybdopterin binding; KEGG: dar:Daro_2592 oxidoreductase, molybdopterin binding
YP_001564158.1	KEGG: mms:mma_3541 thiosulfate reductase cytochrome b subunit (membrane anchoring protein)
YP_001564159.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_B2495 transcriptional regulator, LysR-family
YP_001564160.1	PFAM: pyruvate carboxyltransferase; KEGG: bam:Bamb_6280 pyruvate carboxyltransferase
YP_001564161.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: reh:H16_B2493 predicted acyl-CoA transferase/carnitine dehydratase
YP_001564162.1	PFAM: conserved hypothetical protein; KEGG: pna:Pnap_1121 uncharacterized protein UPF0065
YP_001564164.1	KEGG: plu:plu2078 hypothetical protein
YP_001564165.1	KEGG: pca:Pcar_0362 hypothetical protein
YP_001564166.1	PFAM: intradiol ring-cleavage dioxygenase; KEGG: nar:Saro_1876 intradiol ring-cleavage dioxygenase
YP_001564167.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: aav:Aave_1494 integral membrane sensor signal transduction histidine kinase
YP_001564168.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: aav:Aave_1493 two component transcriptional regulator, winged helix family
YP_001564169.1	KEGG: pfl:PFL_3619 monooxygenase, NtaA/SnaA/SoxA family
YP_001564170.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pau:PA14_10200 putative TonB-dependent receptor protein
YP_001564171.1	PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: pau:PA14_10190 putative transcriptional regulator
YP_001564172.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pfl:PFL_3622 ferric enterobactin transport protein FepC PA4158
YP_001564173.1	with FepCDG is involved in the transport of ferric enterobactin
YP_001564174.1	PFAM: transport system permease protein; KEGG: pfl:PFL_3624 ferric vibriobactin ABC transporter, permease protein VC0777
YP_001564175.1	PFAM: transport system permease protein; KEGG: pfl:PFL_3625 ferric vibriobactin ABC transporter, permease protein VC0778
YP_001564176.1	KEGG: rso:RSc1866 hypothetical protein
YP_001564177.1	PFAM: helix-turn-helix domain protein; KEGG: sgl:SG0777 hypothetical protein
YP_001564178.1	PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: sun:SUN_2434 5-methylcytosine-specific restriction enzyme A
YP_001564179.1	KEGG: rme:Rmet_3347 hypothetical protein
YP_001564180.1	KEGG: pfl:PFL_2777 Ypar31 protein
YP_001564181.1	KEGG: aav:Aave_4020 hypothetical protein
YP_001564183.1	KEGG: bch:Bcen2424_0934 lysine exporter protein (LysE/YggA)
YP_001564184.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_4698 transcriptional regulator, LysR family
YP_001564185.1	KEGG: mmw:Mmwyl1_0268 hypothetical protein
YP_001564186.1	PFAM: conserved hypothetical protein; KEGG: reu:Reut_A1018 twin-arginine translocation pathway signal
YP_001564187.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rme:Rmet_3216 transcriptional regulator, LysR family
YP_001564188.1	PFAM: conserved hypothetical protein; KEGG: reh:H16_A3350 probable extra-cytoplasmic solute receptor
YP_001564189.1	activates fatty acids by binding to coenzyme A
YP_001564190.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: hne:HNE_0595 oxidoreductase, short chain dehydrogenase/reductase family protein
YP_001564191.1	PFAM: Integrase catalytic region; KEGG: ppf:Pput_3520 integrase, catalytic region
YP_001564192.1	PFAM: cytochrome c class I; KEGG: spe:Spro_4016 gluconate 2-dehydrogenase (acceptor)
YP_001564193.1	PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bur:Bcep18194_B1542 (2Fe-2S)-binding protein
YP_001564194.1	PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bam:Bamb_3853 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding
YP_001564195.1	part of the metNIQ transport system for methionine
YP_001564196.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_2344 binding-protein-dependent transport systems inner membrane component
YP_001564197.1	TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: ajs:Ajs_2342 lipoprotein, YaeC family
YP_001564198.1	PFAM: Acireductone dioxygenase ARD; Cupin 2 conserved barrel domain protein; KEGG: ter:Tery_2668 acireductone dioxygenase, ARD
YP_001564199.1	KEGG: ajs:Ajs_2343 hypothetical protein
YP_001564200.1	PFAM: Bile acid:sodium symporter; KEGG: ajs:Ajs_3402 hypothetical protein
YP_001564201.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bvi:Bcep1808_1461 transcriptional regulator, LysR family
YP_001564202.1	KEGG: ecp:ECP_3222 putative tagatose 6-phosphate kinase AgaZ; TIGRFAM: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit; PFAM: D-tagatose-bisphosphate aldolase class II accessory protein AgaZ
YP_001564203.1	PFAM: PfkB domain protein; KEGG: vei:Veis_3416 PfkB domain protein
YP_001564204.1	PFAM: inner-membrane translocator; KEGG: vei:Veis_3417 inner-membrane translocator
YP_001564205.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_3418 ABC transporter related
YP_001564206.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: vei:Veis_3419 periplasmic binding protein/LacI transcriptional regulator
YP_001564207.1	PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: vei:Veis_3420 regulatory protein, DeoR
YP_001564208.1	PFAM: glutamine amidotransferase class-I; KEGG: net:Neut_1032 glutamine amidotransferase class-I
YP_001564209.1	KEGG: par:Psyc_1601 hypothetical protein
YP_001564210.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: spe:Spro_1817 protein of unknown function DUF6 transmembrane
YP_001564211.1	PFAM: helix-turn-helix domain protein; KEGG: pau:PA14_46710 putative transcriptional regulator
YP_001564212.1	KEGG: hch:HCH_06058 hypothetical protein
YP_001564213.1	PFAM: Aspartyl/Asparaginyl beta-hydroxylase; KEGG: hch:HCH_06063 hypothetical protein
YP_001564214.1	PFAM: adenylylsulfate kinase; KEGG: aav:Aave_4709 adenylyl-sulfate kinase
YP_001564215.1	PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_0424 major facilitator superfamily MFS_1
YP_001564216.1	PFAM: integrase family protein; KEGG: rso:RSc1655 probable integrase/recombinase protein
YP_001564221.1	KEGG: pna:Pnap_4291 hypothetical protein
YP_001564223.1	SMART: Pathogenesis-related transcriptional factor and ERF protein; KEGG: nha:Nham_2362 hypothetical protein
YP_001564224.1	PFAM: Pathogenesis-related transcriptional factor and ERF protein; KEGG: bvi:Bcep1808_4541 pathogenesis-related transcriptional factor and ERF protein
YP_001564225.1	KEGG: aav:Aave_4134 hypothetical protein
YP_001564227.1	KEGG: hiq:CGSHiGG_04990 hypothetical protein
YP_001564228.1	PFAM: ERF family protein; KEGG: rsq:Rsph17025_1819 ERF family protein
YP_001564240.1	PFAM: peptidase S24 and S26 domain protein; KEGG: par:Psyc_0472 possible transcriptional regulator, Cro/CI family
YP_001564241.1	KEGG: sat:SYN_01843 hypothetical cytosolic protein
YP_001564242.1	KEGG: mms:mma_2209 hypothetical protein
YP_001564243.1	PFAM: DnaB domain protein helicase domain protein; KEGG: ajs:Ajs_3212 replicative DNA helicase
YP_001564244.1	KEGG: aav:Aave_1690 uncharacterized phage-encoded protein
YP_001564245.1	KEGG: bbr:BB1686 hypothetical protein
YP_001564249.1	KEGG: aha:AHA_2039 NinB protein
YP_001564250.1	KEGG: mms:mma_2189 hypothetical protein
YP_001564251.1	KEGG: reu:Reut_B4055 hypothetical protein
YP_001564252.1	PFAM: Lambda NinG family protein; KEGG: hit:NTHI1505 hypothetical protein
YP_001564256.1	KEGG: har:HEAR3047 hypothetical protein
YP_001564257.1	KEGG: ypk:y2213 hypothetical protein
YP_001564258.1	KEGG: cko:CKO_01870 hypothetical protein
YP_001564259.1	PFAM: protein of unknown function DUF264; KEGG: bbr:BB3506 putative phage terminase
YP_001564260.1	KEGG: cko:CKO_01868 hypothetical protein
YP_001564261.1	KEGG: ecv:APECO1_523 hypothetical protein
YP_001564263.1	KEGG: pap:PSPA7_2407 hypothetical protein
YP_001564264.1	KEGG: bbr:BB3501 hypothetical protein
YP_001564265.1	KEGG: sit:TM1040_0806 hypothetical protein
YP_001564266.1	KEGG: bbr:BB3499 hypothetical protein
YP_001564267.1	KEGG: bbr:BB3497 hypothetical protein
YP_001564268.1	KEGG: yen:YE2318 hypothetical protein
YP_001564269.1	KEGG: smd:Smed_1885 hypothetical protein
YP_001564270.1	PFAM: tail protein 3; KEGG: pap:PSPA7_2414 phage tail protein
YP_001564271.1	KEGG: aav:Aave_1780 hypothetical protein
YP_001564272.1	PFAM: Protein of unknown function DUF1799 phage-related; KEGG: aav:Aave_1781 hypothetical protein
YP_001564274.1	KEGG: bcl:ABC1352 hypothetical protein
YP_001564275.1	PFAM: Arc domain protein DNA binding domain protein
YP_001564276.1	PFAM: KilA domain protein; KEGG: xfa:XF2294 hypothetical protein
YP_001564277.1	PFAM: BRO domain protein; KEGG: cgt:cgR_1918 hypothetical protein
YP_001564278.1	PFAM: Prophage tail length tape measure; KEGG: aav:Aave_1782 prophage tail length tape measure
YP_001564279.1	KEGG: aav:Aave_1783 carbohydrate-binding family V/XII
YP_001564280.1	KEGG: aav:Aave_1784 hypothetical protein
YP_001564281.1	KEGG: spu:761802 hypothetical protein LOC761802
YP_001564283.1	KEGG: mmw:Mmwyl1_0576 hypothetical protein
YP_001564284.1	KEGG: bbr:BB1714 phage-related hypothetical protein
YP_001564285.1	KEGG: aav:Aave_2360 hypothetical protein
YP_001564286.1	catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate
YP_001564287.1	TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: aav:Aave_1844 aminopeptidase N
YP_001564288.1	TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: ajs:Ajs_2758 peptide chain release factor 2
YP_001564289.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: aav:Aave_0227 methyl-accepting chemotaxis sensory transducer
YP_001564290.1	KEGG: yen:YE2278 putative phosphodiesterase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001564291.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mms:mma_3497 RNA polymerase sigma-70 factor, ECF subfamily
YP_001564292.1	PFAM: FecR protein; KEGG: neu:NE1098 putative transmembrane sensor
YP_001564293.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: pen:PSEEN3225 TonB-dependent siderophore receptor FpvA
YP_001564294.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: mms:mma_3485 RNA polymerase sigma-70 factor, ECF subfamily
YP_001564295.1	PFAM: FecR protein; KEGG: mms:mma_3484 Fe2+-dicitrate sensor, membrane component
YP_001564296.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: xcb:XC_0558 ferric pseudobactin M114 receptor protein
YP_001564297.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: psb:Psyr_1040 RNA polymerase sigma factor, ECF subfamily
YP_001564298.1	PFAM: FecR protein; KEGG: mms:mma_3492 Fe2+-dicitrate sensor, membrane component
YP_001564299.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: azo:azo2994 probable TonB-dependent receptor
YP_001564301.1	KEGG: rso:RSc1866 hypothetical protein
YP_001564302.1	KEGG: rsh:Rsph17029_3599 hypothetical protein
YP_001564303.1	PFAM: PepSY-associated TM helix domain protein; KEGG: neu:NE1084 hypothetical protein
YP_001564304.1	KEGG: neu:NE1083 hypothetical protein
YP_001564305.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: neu:NE1082 conserved hypothetical protein
YP_001564306.1	PFAM: ABC transporter related; protein of unknown function DUF214; SMART: AAA ATPase; KEGG: neu:NE1081 probable ATP-binding/permease fusion ABC transporter
YP_001564307.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: mms:mma_3478 outer membrane efflux protein
YP_001564308.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: aav:Aave_3077 acyl-CoA dehydrogenase domain protein
YP_001564309.1	PFAM: aminoglycoside phosphotransferase; KEGG: ajs:Ajs_1778 aminoglycoside phosphotransferase
YP_001564310.1	PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: aav:Aave_3075 transcriptional regulator, Crp/Fnr family
YP_001564311.1	converts 3-hydroxyadipyl-CoA to beta-ketoadipyl-CoA in phenylacetate degradation
YP_001564312.1	KEGG: aav:Aave_3072 hypothetical protein
YP_001564313.1	KEGG: aav:Aave_3071 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase
YP_001564314.1	functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate
YP_001564315.1	TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: aav:Aave_3069 thiamine biosynthesis protein ThiS
YP_001564316.1	PFAM: FAD dependent oxidoreductase; KEGG: aav:Aave_3068 FAD dependent oxidoreductase
YP_001564317.1	KEGG: ajs:Ajs_1787 phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1
YP_001564318.1	PFAM: protein of unknown function DUF1058; SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: ajs:Ajs_1788 SH3, type 3 domain protein
YP_001564319.1	PFAM: Ankyrin; KEGG: pap:PSPA7_2741 hypothetical protein
YP_001564320.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pae:PA1322 probable TonB-dependent receptor
YP_001564321.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: ajs:Ajs_1673 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_001564322.1	PFAM: BolA family protein; KEGG: ajs:Ajs_1674 BolA family protein
YP_001564323.1	Involved in cell division; probably involved in intracellular septation
YP_001564324.1	TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; KEGG: ajs:Ajs_1676 methionine-R-sulfoxide reductase
YP_001564325.1	PFAM: protein of unknown function UPF0061; KEGG: aav:Aave_2947 protein of unknown function UPF0061
YP_001564326.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bra:BRADO5131 putative transcriptional regulator, AraC/XylS family
YP_001564327.1	PFAM: Carboxylesterase type B; KEGG: gka:GK3049 thermostable carboxylesterase
YP_001564328.1	PFAM: peptidase S15; X-Pro dipeptidyl-peptidase domain protein; KEGG: nfa:nfa43000 putative esterase
YP_001564329.1	activates fatty acids by binding to coenzyme A
YP_001564330.1	PFAM: Extracellular ligand-binding receptor; KEGG: ajs:Ajs_1679 extracellular ligand-binding receptor
YP_001564331.1	KEGG: ajs:Ajs_1679 extracellular ligand-binding receptor
YP_001564332.1	PFAM: inner-membrane translocator; KEGG: ajs:Ajs_1680 inner-membrane translocator
YP_001564333.1	PFAM: inner-membrane translocator; KEGG: ajs:Ajs_1681 inner-membrane translocator
YP_001564334.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_1682 ABC transporter related
YP_001564335.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_2930 ABC transporter-related protein
YP_001564336.1	PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: ajs:Ajs_1684 3-hydroxyacyl-CoA dehydrogenase, NAD-binding
YP_001564337.1	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation
YP_001564338.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: ajs:Ajs_1687 acyl-CoA dehydrogenase domain protein
YP_001564339.1	KEGG: aav:Aave_1402 hypothetical protein
YP_001564340.1	KEGG: aav:Aave_1401 hypothetical protein
YP_001564341.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bch:Bcen2424_3651 GCN5-related N-acetyltransferase
YP_001564343.1	KEGG: xac:XAC4135 hypothetical protein
YP_001564344.1	KEGG: sen:SACE_4995 hypothetical protein
YP_001564345.1	PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; pyridoxamine 5'-phosphate oxidase-related FMN-binding; FAD-binding 9 siderophore-interacting domain protein; KEGG: bxe:Bxe_B0926 putative oxidoreductase
YP_001564346.1	PFAM: Glutathione S-transferase domain; KEGG: rle:RL1425 putative glutathione S-transferase
YP_001564347.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B0927 transcriptional regulator, LysR family
YP_001564348.1	KEGG: rso:RS04682 hypothetical protein
YP_001564349.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: FecR protein; sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: ppf:Pput_0896 anti-FecI sigma factor, FecR
YP_001564350.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: reu:Reut_B3686 TonB-dependent siderophore receptor
YP_001564351.1	PFAM: major facilitator superfamily MFS_1; KEGG: bmv:BMASAVP1_0279 drug resistance transporter, EmrB/QacA family
YP_001564352.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfo:Pfl_0141 transcriptional regulator, LysR family
YP_001564353.1	PFAM: NADPH-dependent FMN reductase; flavodoxin/nitric oxide synthase; KEGG: ajs:Ajs_1688 NAD(P)H dehydrogenase (quinone)
YP_001564354.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein
YP_001564356.1	PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: bur:Bcep18194_A3957 N-acetylmuramoyl-L-alanine amidase, family 2
YP_001564357.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: reh:H16_A0216 integral membrane protein
YP_001564358.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_A0215 transcriptional regulator, LysR-family
YP_001564359.1	TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_1689 phosphonate ABC transporter, inner membrane subunit
YP_001564360.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_1690 ABC transporter related
YP_001564361.1	TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: dar:Daro_1826 phosphonate-binding periplasmic protein
YP_001564362.1	PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: aav:Aave_1397 mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein
YP_001564363.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: aav:Aave_1396 short-chain dehydrogenase/reductase SDR
YP_001564364.1	PFAM: conserved hypothetical protein; KEGG: aav:Aave_1395 uncharacterized protein UPF0065
YP_001564365.1	PFAM: dihydrodipicolinate synthetase; KEGG: aav:Aave_1393 dihydrodipicolinate synthetase
YP_001564366.1	PFAM: regulatory protein LysR; KEGG: aav:Aave_1392 transcriptional regulator, LysR family
YP_001564367.1	TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: ecx:EcHS_A3815 L-lactate permease
YP_001564368.1	represses the lctPRD operon
YP_001564369.1	flavin mononucleotide-dependent dehydrogenase; functions in aerobic respiration and also has a role in anaerobic nitrate respiration
YP_001564370.1	component of the membrane-bound D-lactate oxidase, FAD-binding, NADH independent
YP_001564371.1	KEGG: ajs:Ajs_2957 putative transcriptional regulator
YP_001564372.1	PFAM: peptidase S41
YP_001564373.1	PFAM: Aldehyde Dehydrogenase_; KEGG: azo:azo2250 probable succinate semialdehyde dehydrogenase [NAD(P)+]
YP_001564374.1	KEGG: azo:azo2845 conserved hypothetical secreted protein
YP_001564375.1	TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; KEGG: pol:Bpro_5302 pyrrolo-quinoline quinone
YP_001564376.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bbr:BB0832 probable TonB-dependent receptor
YP_001564377.1	PFAM: helix-turn-helix Fis-type; KEGG: mpt:Mpe_A0340 transcriptional activator of acetoin/glycerol metabolism-like protein
YP_001564378.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rme:Rmet_1175 transcriptional regulator, LysR family
YP_001564379.1	PFAM: enolase; KEGG: rme:Rmet_1176 enolase
YP_001564380.1	KEGG: ajs:Ajs_2094 conserved hypothetical protein 95
YP_001564381.1	KEGG: aav:Aave_3399 hypothetical protein
YP_001564382.1	TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: rpd:RPD_4087 methylated-DNA--protein-cysteine methyltransferase
YP_001564383.1	Involved in the nonphosphorylative, ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate
YP_001564384.1	PFAM: thioesterase superfamily protein; KEGG: vei:Veis_2354 uncharacterized domain 1
YP_001564385.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: aav:Aave_2871 alcohol dehydrogenase, zinc-binding domain protein
YP_001564386.1	probable dehydrogenase
YP_001564387.1	PFAM: protein of unknown function DUF1566; KEGG: ajs:Ajs_1701 protein of unknown function DUF1566
YP_001564388.1	TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: aav:Aave_1867 drug resistance transporter, Bcr/CflA subfamily
YP_001564389.1	PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_1703 major facilitator superfamily MFS_1
YP_001564390.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: ajs:Ajs_2836 efflux transporter, RND family, MFP subunit
YP_001564391.1	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: ajs:Ajs_2837 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family
YP_001564392.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: ajs:Ajs_2838 RND efflux system, outer membrane lipoprotein, NodT family
YP_001564393.1	KEGG: mpt:Mpe_A3555 hypothetical protein
YP_001564394.1	PFAM: protein of unknown function DUF72; KEGG: aav:Aave_1869 protein of unknown function DUF72
YP_001564395.1	PFAM: regulator of chromosome condensation RCC1; KEGG: mxa:MXAN_0889 RCC1 repeat domain protein
YP_001564396.1	PFAM: multicopper oxidase type 2; multicopper oxidase type 3; KEGG: art:Arth_4421 multicopper oxidase, type 3
YP_001564397.1	PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: ajs:Ajs_1707 RNA binding S1 domain protein
YP_001564398.1	PFAM: Metal-dependent hydrolase HDOD; KEGG: ajs:Ajs_1708 putative signal transduction protein
YP_001564399.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: ajs:Ajs_1968 Sel1 domain protein repeat-containing protein
YP_001564400.1	PFAM: Peptidoglycan-binding domain 1 protein; KEGG: ajs:Ajs_1969 hypothetical protein
YP_001564401.1	KEGG: ajs:Ajs_1970 hypothetical protein
YP_001564402.1	KEGG: ajs:Ajs_1971 hypothetical protein
YP_001564403.1	PFAM: regulatory protein LuxR; response regulator receiver; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: pol:Bpro_2543 two component transcriptional regulator, LuxR family
YP_001564404.1	PFAM: ATP-binding region ATPase domain protein; KEGG: pol:Bpro_2542 periplasmic sensor signal transduction histidine kinase
YP_001564405.1	PFAM: protein of unknown function UPF0118; GAF domain protein; KEGG: ajs:Ajs_1892 putative GAF sensor protein
YP_001564406.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: pol:Bpro_2526 iron-containing alcohol dehydrogenase
YP_001564407.1	PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: ajs:Ajs_1713 alpha/beta hydrolase fold-3 domain protein
YP_001564408.1	PFAM: GCN5-related N-acetyltransferase; thioesterase superfamily protein; KEGG: ajs:Ajs_1714 thioesterase superfamily protein
YP_001564409.1	TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); KEGG: ajs:Ajs_1715 glycine cleavage T protein (aminomethyl transferase)
YP_001564410.1	PFAM: aminodeoxychorismate lyase; KEGG: vei:Veis_1004 aminodeoxychorismate lyase
YP_001564411.1	catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP)
YP_001564412.1	KEGG: aav:Aave_3411 DNA-directed DNA polymerase
YP_001564413.1	PFAM: type IV pilus assembly PilZ; KEGG: aav:Aave_3410 type IV pilus assembly PilZ
YP_001564414.1	TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: aav:Aave_3409 hydrolase, TatD family
YP_001564415.1	PFAM: Ankyrin; KEGG: aav:Aave_3408 ankyrin
YP_001564416.1	KEGG: aav:Aave_3407 lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; TIGRFAM: lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase
YP_001564417.1	forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA
YP_001564418.1	TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: ajs:Ajs_1724 TonB box domain protein
YP_001564419.1	TIGRFAM: tol-pal system protein YbgF; PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: aav:Aave_3404 tetratricopeptide TPR_2 repeat protein
YP_001564420.1	PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: aav:Aave_3403 UBA/ThiF-type NAD/FAD binding protein
YP_001564422.1	KEGG: csa:Csal_0002 DNA polymerase III, beta subunit
YP_001564425.1	KEGG: ecp:ECP_4546 hypothetical protein
YP_001564428.1	SMART: DEAD-like helicases; KEGG: xfa:XF0680 hypothetical protein
YP_001564430.1	PFAM: VRR-NUC domain protein; KEGG: cbf:CLI_2427 VRR-NUC domain protein
YP_001564431.1	KEGG: sec:SC0331 endodeoxyribonuclease
YP_001564433.1	KEGG: hit:NTHI1489 hypothetical protein
YP_001564434.1	SMART: DNA-directed DNA polymerase; KEGG: xfa:XF0683 phage-related DNA polymerase
YP_001564435.1	PFAM: CMP/dCMP deaminase zinc-binding; KEGG: sfr:Sfri_3571 CMP/dCMP deaminase, zinc-binding
YP_001564436.1	Required for efficient pilin antigenic variation
YP_001564437.1	PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: pna:Pnap_3939 histone-like nucleoid-structuring protein H-NS
YP_001564438.1	KEGG: xft:PD1725 hypothetical protein
YP_001564439.1	KEGG: xft:PD1724 hypothetical protein
YP_001564440.1	KEGG: tcr:506269.40 mucin-associated surface protein (MASP) Pfam: Mucin SerH PROSITE: ALA_RICH GLU_RICH
YP_001564449.1	TIGRFAM: phage/plasmid primase, P4 family; PFAM: primase P4 ; Primase 2; KEGG: bcl:ABC1368 hypothetical protein
YP_001564453.1	PFAM: terminase GpA; KEGG: stm:STM1031 hypothetical protein
YP_001564455.1	TIGRFAM: phage portal protein, lambda family; PFAM: portal protein lambda; KEGG: eba:ebA7269 phage portal protein, lambda family
YP_001564456.1	KEGG: aav:Aave_1723 hypothetical protein
YP_001564457.1	KEGG: pmy:Pmen_3954 hypothetical protein
YP_001564460.1	PFAM: peptidase S14 ClpP; KEGG: sbm:Shew185_0756 peptidase S14 ClpP
YP_001564461.1	KEGG: rsp:RSP_2757 hypothetical protein
YP_001564462.1	KEGG: tcx:Tcr_0682 hypothetical protein
YP_001564466.1	KEGG: son:SO_0679 hypothetical protein
YP_001564467.1	TIGRFAM: phage tape measure protein; KEGG: mfa:Mfla_2689 hypothetical protein
YP_001564468.1	KEGG: rso:RSc0874 probable transmembrane protein
YP_001564469.1	KEGG: aav:Aave_4096 hypothetical protein
YP_001564470.1	KEGG: aav:Aave_4095 hypothetical protein
YP_001564471.1	KEGG: aav:Aave_4094 hypothetical protein
YP_001564472.1	KEGG: aav:Aave_4093 hypothetical protein
YP_001564473.1	KEGG: eba:ebA7267 putative lysozyme
YP_001564480.1	KEGG: pic:PICST_31634 repressed by TUP1 protein 1
YP_001564481.1	KEGG: ajs:Ajs_3336 hypothetical protein
YP_001564482.1	PFAM: integrase family protein; KEGG: ajs:Ajs_3340 phage integrase family protein
YP_001564485.1	KEGG: bbr:BB0749 putative lipoprotein
YP_001564486.1	KEGG: bte:BTH_II1046 ClpP protease
YP_001564487.1	KEGG: mmu:100041170 similar to loricrin
YP_001564488.1	PFAM: Choloylglycine hydrolase; KEGG: bvi:Bcep1808_5029 choloylglycine hydrolase
YP_001564490.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bra:BRADO5978 putative histone acetyltransferase (HAT)
YP_001564491.1	PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); KEGG: ajs:Ajs_0352 UDP-N-acetylglucosamine 1-carboxyvinyltransferase
YP_001564493.1	PFAM: Arc domain protein DNA binding domain protein; KEGG: bvi:Bcep1808_4550 Arc domain protein DNA binding domain protein
YP_001564494.1	PFAM: CsbD family protein; KEGG: pna:Pnap_3279 CsbD family protein
YP_001564495.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: reh:H16_A0406 hypothetical protein with GGDEF domain
YP_001564496.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: ajs:Ajs_3430 methyl-accepting chemotaxis sensory transducer
YP_001564497.1	PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: aav:Aave_1150 histone family protein nucleoid-structuring protein H-NS
YP_001564498.1	PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: aav:Aave_0421 methyl-accepting chemotaxis sensory transducer
YP_001564499.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: spe:Spro_1181 diguanylate cyclase
YP_001564500.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: vei:Veis_0270 putative transcriptional regulator, AsnC family
YP_001564501.1	PFAM: peptidase S45 penicillin amidase; KEGG: aav:Aave_1140 peptidase S45, penicillin amidase
YP_001564502.1	TIGRFAM: selenide, water dikinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: bxe:Bxe_B2555 selenide water dikinase
YP_001564503.1	KEGG: ppu:PP_4671 hypothetical protein
YP_001564504.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: pau:PA14_49890 hypothetical protein
YP_001564505.1	PFAM: OmpA/MotB domain protein; KEGG: reh:H16_A2519 outer membrane protein and related peptidoglycan-associated proteins
YP_001564506.1	TIGRFAM: selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 2; Elongation factor SelB winged helix 3; KEGG: bxe:Bxe_B2548 translation elongation factor, selenocysteine-specific
YP_001564507.1	catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis
YP_001564508.1	TIGRFAM: formate dehydrogenase accessory protein FdhE; PFAM: formate dehydrogenase accessory protein; KEGG: bch:Bcen2424_3987 formate dehydrogenase accessory protein FdhE
YP_001564509.1	TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: dar:Daro_1816 formate dehydrogenase, gamma subunit
YP_001564510.1	TIGRFAM: formate dehydrogenase, beta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Formate dehydrogenase transmembrane domain protein; KEGG: bam:Bamb_3378 formate dehydrogenase, beta subunit
YP_001564511.1	KEGG: bam:Bamb_3377 formate dehydrogenase, alpha subunit; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region
YP_001564512.1	PFAM: molybdopterin oxidoreductase Fe4S4 region; KEGG: bxe:Bxe_B2554 formate dehydrogenase-O, major subunit
YP_001564513.1	PFAM: protein of unknown function UPF0118; KEGG: ajs:Ajs_1821 protein of unknown function UPF0118
YP_001564514.1	SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide
YP_001564515.1	TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: ajs:Ajs_1823 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase
YP_001564516.1	E3 component of 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide
YP_001564517.1	PFAM: AFG1-family ATPase; KEGG: ajs:Ajs_1825 AFG1-family ATPase
YP_001564518.1	KEGG: aav:Aave_3244 hypothetical protein
YP_001564519.1	SMART: protein phosphatase 2C domain protein; KEGG: ajs:Ajs_1827 protein phosphatase 2C domain protein
YP_001564520.1	SMART: helicase c2; DEAD-like helicases; KEGG: pol:Bpro_2617 helicase C2
YP_001564521.1	KEGG: ajs:Ajs_1829 putative transmembrane protein
YP_001564522.1	KEGG: ajs:Ajs_1830 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein
YP_001564523.1	involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA
YP_001564524.1	KEGG: ajs:Ajs_1832 ATP-dependent Clp protease, ATP-binding subunit ClpA; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase
YP_001564525.1	PFAM: phospholipase D/Transphosphatidylase; KEGG: xac:XAC0014 cardiolipin synthetase
YP_001564526.1	Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates
YP_001564527.1	PFAM: nucleoside recognition domain protein; KEGG: pfl:PFL_0096 nucleoside transporter
YP_001564528.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mlo:mll3737 hypothetical protein
YP_001564529.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: reu:Reut_A3459 trans-aconitate 2-methyltransferase
YP_001564530.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: spe:Spro_2326 transcriptional regulator, LysR family
YP_001564531.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: vei:Veis_3047 transcriptional regulator, LysR family
YP_001564532.1	PFAM: HpcH/HpaI aldolase; KEGG: vei:Veis_3048 citryl-CoA lyase
YP_001564533.1	PFAM: conserved hypothetical protein; KEGG: vei:Veis_3049 uncharacterized protein UPF0065
YP_001564534.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: vei:Veis_3050 L-carnitine dehydratase/bile acid-inducible protein F
YP_001564535.1	PFAM: amidohydrolase 2; KEGG: bja:blr2281 putative 2-pyrone-4,6-dicarbaxylate hydrolase
YP_001564536.1	PFAM: conserved hypothetical protein; KEGG: reu:Reut_B3798 hypothetical protein
YP_001564537.1	KEGG: aav:Aave_2829 glucose sorbosone dehydrogenase
YP_001564538.1	PFAM: protein of unknown function DUF28; KEGG: pol:Bpro_2928 protein of unknown function DUF28
YP_001564539.1	Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate
YP_001564540.1	PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: aav:Aave_3217 pyridoxal-5'-phosphate-dependent enzyme, beta subunit
YP_001564541.1	PFAM: protein of unknown function DUF853 NPT hydrolase putative; KEGG: aav:Aave_3204 protein of unknown function DUF853, NPT hydrolase putative
YP_001564542.1	PFAM: protein of unknown function DUF28; KEGG: ajs:Ajs_1898 protein of unknown function DUF28
YP_001564543.1	catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis
YP_001564544.1	catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis
YP_001564545.1	TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: aav:Aave_3200 iojap-like protein
YP_001564546.1	SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA
YP_001564547.1	TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: ajs:Ajs_1903 maf protein
YP_001564548.1	TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: aav:Aave_3196 ribonuclease, Rne/Rng family
YP_001564549.1	KEGG: hch:HCH_03141 hypothetical protein
YP_001564550.1	PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: ccr:CC_0555 hypothetical protein
YP_001564551.1	PFAM: conserved hypothetical protein; KEGG: pna:Pnap_0869 uncharacterized protein UPF0065
YP_001564552.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bbr:BB3900 ferric alcaligin siderophore receptor
YP_001564553.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bbr:BB3898 transcriptional regulator
YP_001564554.1	PFAM: Tannase and feruloyl esterase; KEGG: bra:BRADO4865 putative feruloyl esterase
YP_001564555.1	catalyzes the transfer of an amino moiety
YP_001564556.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_3166 transcriptional regulator, LysR family
YP_001564557.1	PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: aav:Aave_3165 cobalamin (vitamin B12) biosynthesis CbiX protein
YP_001564558.1	PFAM: permease YjgP/YjgQ family protein; KEGG: aav:Aave_3164 permease YjgP/YjgQ family protein
YP_001564559.1	PFAM: permease YjgP/YjgQ family protein; KEGG: aav:Aave_3163 permease YjgP/YjgQ family protein
YP_001564560.1	PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: aav:Aave_3162 leucyl aminopeptidase
YP_001564561.1	PFAM: DNA polymerase III chi subunit HolC; KEGG: aav:Aave_3161 DNA polymerase III chi subunit, HolC
YP_001564562.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: pol:Bpro_2956 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
YP_001564563.1	PFAM: Prophage CP4-57 regulatory; KEGG: azo:azo2049 hypothetical protein
YP_001564564.1	KEGG: bbr:BB1668 modification methylase
YP_001564565.1	KEGG: bur:Bcep18194_B0821 hypothetical protein
YP_001564567.1	KEGG: ret:RHE_PD00236 putative integrase protein
YP_001564568.1	PFAM: Integrase catalytic region; KEGG: rru:Rru_A1128 integrase, catalytic region
YP_001564569.1	PFAM: protein of unknown function DUF900 hydrolase family protein; KEGG: ter:Tery_2076 protein of unknown function DUF900, hydrolase-like
YP_001564570.1	KEGG: spu:578470 similar to SEC24 related gene family, member C (S. cerevisiae)
YP_001564571.1	KEGG: rme:Rmet_0836 hypothetical protein
YP_001564572.1	KEGG: ccv:CCV52592_1309 hypothetical protein
YP_001564575.1	KEGG: bbr:BB2240 putative phage lysozyme
YP_001564576.1	KEGG: aav:Aave_2360 hypothetical protein
YP_001564577.1	KEGG: aav:Aave_1931 hypothetical protein
YP_001564578.1	KEGG: xac:XAC2267 hypothetical protein
YP_001564579.1	TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein; KEGG: nha:Nham_3430 CrcB protein
YP_001564580.1	KEGG: bra:BRADO5230 hypothetical protein
YP_001564581.1	PFAM: FecR protein; KEGG: pfl:PFL_2292 sigma factor regulatory protein FecR
YP_001564582.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: pfl:PFL_2291 RNA polymerase sigma factor FecI
YP_001564584.1	Represses a number of genes involved in the response to DNA damage
YP_001564585.1	PFAM: Asparaginase/glutaminase; KEGG: aav:Aave_2559 asparaginase/glutaminase
YP_001564586.1	essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP
YP_001564587.1	KEGG: ajs:Ajs_2307 3-deoxy-D-manno-octulosonate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase
YP_001564588.1	PFAM: protein of unknown function DUF343; KEGG: ajs:Ajs_2306 protein of unknown function DUF343
YP_001564589.1	transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate
YP_001564590.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: aav:Aave_2565 biopolymer transport protein ExbD/TolR
YP_001564591.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: ajs:Ajs_2303 MotA/TolQ/ExbB proton channel
YP_001564592.1	KEGG: ajs:Ajs_2302 exodeoxyribonuclease VII, large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII large subunit; nucleic acid binding OB-fold tRNA/helicase-type
YP_001564593.1	PFAM: manganese and iron superoxide dismutase; KEGG: aav:Aave_2568 superoxide dismutase
YP_001564594.1	PFAM: major facilitator superfamily MFS_1; KEGG: mms:mma_0501 MFS superfamily drug efflux transporter
YP_001564595.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mms:mma_0503 transcriptional regulator, LysR family
YP_001564596.1	PFAM: major facilitator superfamily MFS_1; KEGG: pfl:PFL_4098 transporter, putative
YP_001564597.1	PFAM: regulatory protein TetR; KEGG: pfl:PFL_4099 transcriptional regulator, TetR family
YP_001564598.1	KEGG: ajs:Ajs_1632 PEP phosphonomutase
YP_001564599.1	PFAM: conserved hypothetical protein; KEGG: bbr:BB4843 hypothetical protein
YP_001564600.1	PFAM: conserved hypothetical protein; KEGG: reh:H16_B2001 probable extra-cytoplasmic solute receptor
YP_001564601.1	KEGG: reh:H16_A1904 propionate catabolism activator; TIGRFAM: PAS sensor protein; propionate catabolism operon regulatory protein PrpR; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; Propionate catabolism activator domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; AAA ATPase
YP_001564602.1	KEGG: aav:Aave_3441 hypothetical protein
YP_001564603.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aci:ACIAD2742 putative transcriptional regulator
YP_001564604.1	PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: pen:PSEEN2008 L-serine dehydratase
YP_001564605.1	TIGRFAM: AcnD-accessory protein PrpF; PFAM: protein of unknown function DUF453; KEGG: ppu:PP_2337 hypothetical protein
YP_001564606.1	Catalyzes the conversion of citrate to isocitrate
YP_001564607.1	PFAM: conserved hypothetical protein; KEGG: rme:Rmet_6149 twin-arginine translocation pathway signal
YP_001564608.1	KEGG: ajs:Ajs_2088 diguanylate cyclase/phosphodiesterase with PAS/PAC and CHASE sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001564609.1	TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; KEGG: aav:Aave_2843 chromosome segregation protein SMC
YP_001564610.1	FtsZ-binding region; SMART: ZipA FtsZ-binding region; KEGG: aav:Aave_2842 ZipA, C-terminal FtsZ-binding region
YP_001564611.1	KEGG: ajs:Ajs_2083 DNA ligase, NAD-dependent; TIGRFAM: DNA ligase, NAD-dependent; PFAM: helix-hairpin-helix motif; BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; NAD-dependent DNA ligase adenylation; SMART: Helix-hairpin-helix DNA-binding class 1; NAD-dependent DNA ligase
YP_001564612.1	PFAM: Patatin; KEGG: ajs:Ajs_2082 patatin
YP_001564613.1	PFAM: CheW domain protein; KEGG: mpt:Mpe_A2970 hypothetical protein
YP_001564614.1	PFAM: NUDIX hydrolase; KEGG: vei:Veis_3823 NUDIX hydrolase
YP_001564615.1	PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: aav:Aave_2473 fumarylacetoacetate (FAA) hydrolase
YP_001564616.1	TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase domain; KEGG: ajs:Ajs_2077 maleylacetoacetate isomerase
YP_001564617.1	PFAM: protein of unknown function DUF152; KEGG: vei:Veis_3820 protein of unknown function DUF152
YP_001564618.1	KEGG: ajs:Ajs_2075 hypothetical protein
YP_001564619.1	TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I; PFAM: alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: aav:Aave_2477 poly(R)-hydroxyalkanoic acid synthase, class I
YP_001564620.1	KEGG: aav:Aave_2478 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase
YP_001564621.1	catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
YP_001564622.1	PFAM: peptidase T2 asparaginase 2; KEGG: aav:Aave_1656 peptidase T2, asparaginase 2
YP_001564623.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbr:BB4446 putative amino acid ABC transporter permease protein
YP_001564624.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azo:azo1330 putative amino acid permease
YP_001564625.1	SMART: extracellular solute-binding protein family 3; KEGG: azo:azo1331 putative amino acid-binding protein
YP_001564626.1	PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: pmy:Pmen_1089 transcriptional regulator, RpiR family
YP_001564627.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_2480 ABC transporter-related protein
YP_001564628.1	PFAM: conserved hypothetical protein; KEGG: aav:Aave_0200 uncharacterized protein UPF0065
YP_001564629.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ppu:PP_2039 acyl-CoA dehydrogenase, putative
YP_001564630.1	PFAM: AMP-dependent synthetase and ligase; KEGG: reu:Reut_B5309 AMP-dependent synthetase and ligase
YP_001564631.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_6272 transcriptional regulator, LysR family
YP_001564632.1	involved in methylation of ribosomal protein L3
YP_001564633.1	dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.
YP_001564634.1	TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: ajs:Ajs_2068 twitching motility protein
YP_001564635.1	catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway
YP_001564636.1	catalyzes the formation of succinyldiaminopimelate from N-succinyl-2-amino-6-ketopimelate
YP_001564637.1	PFAM: chemotaxis sensory transducer; KEGG: ajs:Ajs_2065 methyl-accepting chemotaxis sensory transducer
YP_001564638.1	TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Fe-S cluster domain protein; KEGG: ajs:Ajs_2064 electron transport complex, RnfABCDGE type, B subunit
YP_001564639.1	TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: aav:Aave_2488 polyhydroxyalkanoate depolymerase, intracellular
YP_001564640.1	TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase DuS; KEGG: ajs:Ajs_2060 TIM-barrel protein, YjbN family
YP_001564641.1	KEGG: aav:Aave_3790 transposase, IS4 family protein
YP_001564642.1	KEGG: aav:Aave_3789 putative TIS1421-transposase orfA protein
YP_001564643.1	KEGG: mlo:mlr6150 transposase
YP_001564644.1	KEGG: bch:Bcen2424_3232 integrase, catalytic region
YP_001564645.1	PFAM: transposase IS3/IS911 family protein; KEGG: pna:Pnap_4650 transposase IS3/IS911 family protein
YP_001564646.1	PFAM: acyltransferase 3; KEGG: psp:PSPPH_2622 exopolysaccharide production protein ExoZ, putative
YP_001564647.1	KEGG: aav:Aave_3789 putative TIS1421-transposase orfA protein
YP_001564648.1	KEGG: aav:Aave_3790 transposase, IS4 family protein
YP_001564649.1	KEGG: aav:Aave_2383 hypothetical protein
YP_001564650.1	KEGG: cvi:CV_1338 hypothetical protein
YP_001564653.1	PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: mpt:Mpe_A2450 putative two-component response regulator
YP_001564654.1	PFAM: ANTAR domain protein; KEGG: vei:Veis_4901 response regulator receiver and ANTAR domain protein
YP_001564655.1	KEGG: vei:Veis_4902 ABC branched chain amino acid family transporter, periplasmic ligand binding protein
YP_001564656.1	PFAM: von Willebrand factor type A; KEGG: vei:Veis_4903 von Willebrand factor, type A
YP_001564657.1	PFAM: ATPase associated with various cellular activities AAA_5; CbbQ/NirQ/NorQ domain protein; KEGG: vei:Veis_4904 ATPase associated with various cellular activities, AAA_5
YP_001564658.1	aliphatic amidase; catalyzes the hydrolysis of short-chain aliphatic amides to their organic acids and can also transfer the acyl moiety of short-chain amides to hydroxylamine to form hydroxamates
YP_001564659.1	PFAM: Gluconate transporter; Citrate transporter; KEGG: pcr:Pcryo_1595 GntP family transporter
YP_001564660.1	PFAM: cytochrome P450; KEGG: bur:Bcep18194_B1689 cytochrome P450
YP_001564661.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_B1690 transcriptional regulator, AraC family
YP_001564662.1	KEGG: ajs:Ajs_2300 isocitrate dehydrogenase, NADP-dependent; TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate dehydrogenase NADP-dependent monomeric type
YP_001564663.1	PFAM: RNP-1 like RNA-binding protein; KEGG: aav:Aave_2141 RNP-1-like RNA-binding protein
YP_001564664.1	KEGG: aav:Aave_2142 hypothetical protein
YP_001564665.1	KEGG: mes:Meso_4003 putative ferric uptake regulator, Fur family
YP_001564666.1	PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bur:Bcep18194_B0316 cobalamin synthesis protein/P47K
YP_001564667.1	similar protein in Methanocaldococcus converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate as the first step in methanopterin biosynthesis
YP_001564668.1	smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif
YP_001564669.1	KEGG: bur:Bcep18194_B0319 carbonic anhydrase/acetyltransferase isoleucine patch superfamily
YP_001564670.1	PFAM: ferric-uptake regulator; KEGG: rme:Rmet_2976 ferric uptake regulator, FUR family
YP_001564671.1	KEGG: mxa:MXAN_1759 hypothetical protein
YP_001564672.1	PFAM: regulatory protein MarR; KEGG: mxa:MXAN_1760 transcriptional regulator, MarR family
YP_001564673.1	KEGG: vei:Veis_4739 hypothetical protein
YP_001564674.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: vei:Veis_4740 TonB-dependent siderophore receptor
YP_001564675.1	KEGG: aav:Aave_4449 hypothetical protein
YP_001564676.1	PFAM: protein of unknown function DUF192; KEGG: aav:Aave_2570 protein of unknown function DUF192
YP_001564677.1	KEGG: aav:Aave_2571 hypothetical protein
YP_001564678.1	Converts isocitrate to alpha ketoglutarate
YP_001564679.1	PFAM: Ig family protein; KEGG: rfr:Rfer_1577 protease-like
YP_001564680.1	KEGG: rso:RSc1444 hypothetical protein
YP_001564681.1	KEGG: rfr:Rfer_1207 aspartyl protease-like
YP_001564682.1	PFAM: beta-lactamase; KEGG: stp:Strop_0635 beta-lactamase
YP_001564683.1	catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
YP_001564684.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bbr:BB4264 hypothetical protein
YP_001564685.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bbr:BB4262 putative GntR-family transcriptional regulator
YP_001564686.1	KEGG: pol:Bpro_4259 putative lipoprotein
YP_001564687.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: rfr:Rfer_1707 cupin 2 protein
YP_001564688.1	PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: tbd:Tbd_0651 hypothetical protein
YP_001564689.1	PFAM: conserved hypothetical protein; KEGG: vei:Veis_1198 uncharacterized protein UPF0065
YP_001564690.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: aav:Aave_0178 L-carnitine dehydratase/bile acid-inducible protein F
YP_001564691.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: aav:Aave_0177 cupin 2, conserved barrel domain protein
YP_001564692.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: aav:Aave_0176 acyl-CoA dehydrogenase domain protein
YP_001564693.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_0175 transcriptional regulator, LysR family
YP_001564696.1	KEGG: nha:Nham_0235 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001564697.1	KEGG: vei:Veis_4644 porin, gram-negative type
YP_001564698.1	KEGG: esa:ESA_01915 hypothetical protein
YP_001564699.1	PFAM: NERD domain protein; KEGG: aav:Aave_4619 hypothetical protein
YP_001564700.1	KEGG: bbr:BB1251 hypothetical protein
YP_001564701.1	KEGG: swi:Swit_3482 hypothetical protein
YP_001564702.1	KEGG: pca:Pcar_0535 hypothetical protein
YP_001564704.1	PFAM: Propeptide PepSY amd peptidase M4; KEGG: prw:PsycPRwf_1922 propeptide, PepSY amd peptidase M4
YP_001564705.1	catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate
YP_001564707.1	KEGG: ajs:Ajs_2005 3-hydroxyisobutyrate dehydrogenase; TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: TrkA-N domain protein; NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding
YP_001564708.1	KEGG: reh:H16_A3515 hypothetical protein
YP_001564709.1	KEGG: ajs:Ajs_2006 hypothetical protein
YP_001564710.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_2007 acyl-CoA dehydrogenase domain protein
YP_001564711.1	PFAM: protein of unknown function DUF1311; KEGG: aav:Aave_2603 hypothetical protein
YP_001564712.1	TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: ajs:Ajs_2009 methylmalonate-semialdehyde dehydrogenase
YP_001564713.1	PFAM: regulatory protein MarR; KEGG: pol:Bpro_2197 transcriptional regulator, MarR family
YP_001564714.1	PFAM: conserved hypothetical protein; KEGG: pol:Bpro_2198 uncharacterized protein UPF0065
YP_001564715.1	PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: pol:Bpro_2199 monooxygenase, FAD-binding
YP_001564716.1	PFAM: conserved hypothetical protein; KEGG: pna:Pnap_3148 uncharacterized protein UPF0065
YP_001564717.1	TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase domain; KEGG: pna:Pnap_3147 maleylacetoacetate isomerase
YP_001564718.1	PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: pna:Pnap_3146 fumarylacetoacetate (FAA) hydrolase
YP_001564719.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: pna:Pnap_3145 cupin 2, conserved barrel domain protein
YP_001564720.1	catalyzes the formation of catechol from salicylate
YP_001564721.1	PFAM: regulatory protein MarR; KEGG: pna:Pnap_3143 transcriptional regulator, MarR family
YP_001564722.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_2010 transcriptional regulator, LysR family
YP_001564723.1	PFAM: Patatin; KEGG: aav:Aave_2086 patatin
YP_001564724.1	catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate
YP_001564725.1	TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: mca:MCA2079 acetylornithine aminotransferase
YP_001564726.1	PFAM: alanine racemase domain protein; KEGG: eca:ECA4047 putative alanine racemase
YP_001564727.1	TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; Xanthine/uracil/vitamin C permease; KEGG: mms:mma_2006 benzoate transport protein
YP_001564728.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bbr:BB0707 probable GntR-family transcriptional regulator
YP_001564729.1	catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate
YP_001564730.1	KEGG: mxa:MXAN_1292 hypothetical protein
YP_001564731.1	PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: ppr:PBPRB0302 conserved hypothetical protein
YP_001564732.1	Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group
YP_001564733.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: mms:mma_1686 hypothetical protein
YP_001564734.1	PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: aav:Aave_2580 histone family protein nucleoid-structuring protein H-NS
YP_001564735.1	PFAM: transferase hexapeptide repeat containing protein; KEGG: cbe:Cbei_3719 maltose O-acetyltransferase
YP_001564737.1	TIGRFAM: YD repeat protein; KEGG: xac:XAC3245 RhsD protein
YP_001564739.1	KEGG: aav:Aave_3790 transposase, IS4 family protein
YP_001564740.1	KEGG: aav:Aave_3789 putative TIS1421-transposase orfA protein
YP_001564741.1	KEGG: pau:PA14_20520 hypothetical protein
YP_001564743.1	KEGG: sdn:Sden_2437 YD repeat
YP_001564744.1	KEGG: sdn:Sden_2437 YD repeat
YP_001564745.1	PFAM: protein of unknown function DUF74; KEGG: gsu:GSU2791 hypothetical protein
YP_001564746.1	PFAM: periplasmic binding protein; KEGG: ajs:Ajs_1099 periplasmic binding protein
YP_001564747.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pna:Pnap_2368 TonB-dependent receptor, plug
YP_001564748.1	KEGG: pfl:PFL_4030 hypothetical protein
YP_001564749.1	PFAM: helix-turn-helix domain protein; KEGG: pau:PA14_11150 putative transcriptional regulator
YP_001564750.1	PFAM: protein of unknown function DUF81; KEGG: pfl:PFL_4527 hypothetical protein
YP_001564751.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pap:PSPA7_4726 probable transcriptional regulator
YP_001564752.1	PFAM: major facilitator superfamily MFS_1; KEGG: bbr:BB2331 hypothetical protein
YP_001564753.1	PFAM: helix-turn-helix HxlR type; KEGG: bbr:BB2332 putative transcriptional regulator
YP_001564754.1	KEGG: mpt:Mpe_A0377 rod shape-determining-related protein
YP_001564755.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pfl:PFL_5169 iron-regulated outer membrane virulence protein
YP_001564756.1	involved in the transport across the cytoplasmic membrane of D-alanine, D-serine and glycine
YP_001564757.1	KEGG: aav:Aave_3004 hypothetical protein
YP_001564758.1	KEGG: bxe:Bxe_B2649 hypothetical protein
YP_001564759.1	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: eba:ebA3448 probable multidrug resistance B (translocase) transmembrane protein
YP_001564760.1	PFAM: secretion protein HlyD family protein; KEGG: eba:ebA3446 putative multidrug resistance protein
YP_001564761.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: eba:ebA3445 putative outer membrane protein
YP_001564762.1	PFAM: regulatory protein MarR; KEGG: rfr:Rfer_1513 transcriptional regulator, MarR family
YP_001564763.1	KEGG: reh:H16_A1823 hypothetical protein
YP_001564764.1	PFAM: AzlC family protein; KEGG: bte:BTH_I0320 brancheD-chain amino acid transport protein AzlC
YP_001564765.1	PFAM: branched-chain amino acid transport; KEGG: bte:BTH_I0321 domain of unknown function (DUF931) superfamily
YP_001564766.1	KEGG: eca:ECA2237 hypothetical protein
YP_001564767.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: tbd:Tbd_1622 chemotaxis sensory transducer
YP_001564768.1	PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_2038 AMP-dependent synthetase and ligase
YP_001564769.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: ajs:Ajs_2039 transcriptional regulator, GntR family
YP_001564770.1	MDM; functions in conversion of succinate to propionate
YP_001564771.1	functions in transport of arginine/ornithine; inner membrane ATPase that cleaves ATP and phosphorylates two periplasmic proteins that function as two distinct transport systems, the AO (arginine and ornithine) and LAO (lysine, arginine, and ornithine) periplasmic binding proteins
YP_001564772.1	PFAM: carboxyl transferase; KEGG: ajs:Ajs_2042 carboxyl transferase
YP_001564773.1	TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: biotin/lipoyl attachment domain-containing protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: ajs:Ajs_2043 carbamoyl-phosphate synthase L chain, ATP-binding
YP_001564774.1	PFAM: PilT protein domain protein; KEGG: pde:Pden_0483 PilT protein domain protein
YP_001564775.1	KEGG: rpd:RPD_2062 SpoVT/AbrB-like
YP_001564776.1	PFAM: response regulator receiver; CheW domain protein; KEGG: vei:Veis_1763 putative CheW protein
YP_001564777.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: aav:Aave_2798 transcriptional regulator, LacI family
YP_001564778.1	TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase; KEGG: ajs:Ajs_2053 carbohydrate kinase, thermoresistant glucokinase family
YP_001564779.1	PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: aav:Aave_2796 tripartite ATP-independent periplasmic transporter, DctQ component
YP_001564780.1	TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: ajs:Ajs_2051 TRAP dicarboxylate transporter, DctM subunit
YP_001564781.1	TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: ajs:Ajs_2050 TRAP dicarboxylate transporter, DctP subunit
YP_001564782.1	catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate
YP_001564783.1	KEGG: aav:Aave_2792 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase
YP_001564784.1	PFAM: chemotaxis sensory transducer; KEGG: har:HEAR3262 methyl-accepting chemotaxis protein
YP_001564785.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: bja:bll5864 hypothetical protein
YP_001564786.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reu:Reut_A2910 regulatory protein, LysR:LysR, substrate-binding
YP_001564787.1	PFAM: conserved hypothetical protein; KEGG: pol:Bpro_2752 uncharacterized protein UPF0065
YP_001564788.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: reu:Reut_A2908 L-carnitine dehydratase/bile acid-inducible protein F
YP_001564789.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: reu:Reut_A2907 enoyl-CoA hydratase
YP_001564790.1	TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: aav:Aave_4255 TonB family protein
YP_001564791.1	PFAM: Heat shock protein 70; KEGG: aav:Aave_4256 heat shock protein 70
YP_001564792.1	PFAM: Ricin B lectin; KEGG: sco:SCO7212 secreted glycosyl hydrolase
YP_001564793.1	PFAM: protein of unknown function DUF218; KEGG: pcr:Pcryo_2372 protein of unknown function DUF218
YP_001564794.1	KEGG: ajs:Ajs_2044 lactoylglutathione lyase
YP_001564795.1	KEGG: aav:Aave_0646 UvrD/REP helicase
YP_001564796.1	KEGG: aav:Aave_2518 biotin synthase; TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB
YP_001564797.1	PFAM: integrase family protein; KEGG: rfr:Rfer_2261 phage integrase
YP_001564798.1	KEGG: rfr:Rfer_2260 hypothetical protein
YP_001564799.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mlo:mll6988 transcriptional regulator
YP_001564800.1	PFAM: gamma-glutamyltranspeptidase; KEGG: ret:RHE_CH02146 gamma-glutamyltranspeptidase protein
YP_001564801.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bbr:BB1600 putative GntR-family transcriptional regulator
YP_001564802.1	PFAM: conserved hypothetical protein; KEGG: reh:H16_B0983 probable extra-cytoplasmic solute receptor
YP_001564803.1	PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: aav:Aave_0421 methyl-accepting chemotaxis sensory transducer
YP_001564804.1	PFAM: beta-lactamase; KEGG: mms:mma_2923 6-aminohexanoate-dimer hydrolase
YP_001564805.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rme:Rmet_3719 transcriptional regulator, LysR family
YP_001564806.1	PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: pfl:PFL_2239 hypothetical protein
YP_001564807.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO0998 Fe uptake system permease
YP_001564808.1	PFAM: transport system permease protein; KEGG: ava:Ava_B0152 transport system permease protein
YP_001564809.1	PFAM: periplasmic binding protein; KEGG: pmy:Pmen_4565 periplasmic binding protein
YP_001564810.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mfa:Mfla_0109 TonB-dependent siderophore receptor
YP_001564811.1	KEGG: rme:Rmet_3764 hypothetical protein
YP_001564812.1	PFAM: 2OG-Fe(II) oxygenase; KEGG: rso:RSc2568 probable alkylated DNA repair protein
YP_001564813.1	KEGG: reu:Reut_B5118 hypothetical protein
YP_001564816.1	KEGG: sfu:Sfum_0786 hypothetical protein
YP_001564818.1	PFAM: conserved hypothetical protein; KEGG: aav:Aave_3271 uncharacterized protein UPF0065
YP_001564819.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pol:Bpro_1450 two component transcriptional regulator, winged helix family
YP_001564820.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; KEGG: pol:Bpro_1451 histidine kinase
YP_001564821.1	PFAM: conserved hypothetical protein; KEGG: bbr:BB5009 putative tricarboxylic transport membrane protein
YP_001564822.1	KEGG: har:HEAR0855 hypothetical protein
YP_001564823.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mms:mma_1917 RNA polymerase sigma-70 factor, ECF subfamily
YP_001564824.1	KEGG: psp:PSPPH_0345 RNA polymerase sigma-70 family protein
YP_001564825.1	PFAM: porin Gram-negative type; KEGG: reh:H16_A0625 outer membrane protein (porin)
YP_001564826.1	KEGG: vei:Veis_1359 hypothetical protein
YP_001564827.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: vei:Veis_1366 transcriptional regulator, LysR family
YP_001564828.1	PFAM: alpha/beta hydrolase fold; KEGG: vei:Veis_1360 alpha/beta hydrolase fold
YP_001564829.1	extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols; part of the bacterial aromatic compound degradation pathway
YP_001564830.1	extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols; part of the bacterial aromatic compound degradation pathway
YP_001564831.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pfl:PFL_3480 major facilitator family transporter
YP_001564832.1	PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: aav:Aave_1485 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding
YP_001564833.1	PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: aav:Aave_1486 molybdopterin dehydrogenase, FAD-binding
YP_001564834.1	PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: rle:pRL120302 putative xanthine dehydrogenase YagT iron-sulfur binding subunit
YP_001564835.1	SMART: AAA ATPase; KEGG: pmy:Pmen_3386 hypothetical protein
YP_001564836.1	PFAM: band 7 protein; KEGG: pmy:Pmen_3387 hypothetical protein
YP_001564837.1	KEGG: sde:Sde_3478 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6
YP_001564838.1	PFAM: PspA/IM30 family protein; KEGG: pfl:PFL_1112 PspA/IM30 family protein
YP_001564839.1	KEGG: pmy:Pmen_3390 hypothetical protein
YP_001564840.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase HAMP region domain protein; Cache domain protein; KEGG: vfi:VF0094 sensory box/GGDEF family protein
YP_001564841.1	PFAM: diacylglycerol kinase catalytic region; KEGG: aav:Aave_3490 diacylglycerol kinase, catalytic region
YP_001564842.1	PFAM: metallophosphoesterase; KEGG: aav:Aave_3489 metallophosphoesterase
YP_001564843.1	PFAM: response regulator receiver; KEGG: aav:Aave_3992 response regulator receiver protein
YP_001564844.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: aav:Aave_3993 response regulator receiver sensor signal transduction histidine kinase
YP_001564845.1	PFAM: CheB methylesterase; KEGG: ajs:Ajs_0649 CheB methylesterase
YP_001564846.1	PFAM: MCP methyltransferase CheR-type; KEGG: ajs:Ajs_0648 MCP methyltransferase, CheR-type
YP_001564847.1	PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; CHASE3 domain protein; KEGG: aav:Aave_3996 multi-sensor hybrid histidine kinase
YP_001564848.1	KEGG: rme:Rmet_4756 hypothetical protein
YP_001564850.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: ajs:Ajs_0160 methyl-accepting chemotaxis sensory transducer
YP_001564851.1	KEGG: spn:SP_1772 cell wall surface anchor family protein
YP_001564852.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pmy:Pmen_0702 transcriptional regulator, GntR family
YP_001564853.1	PFAM: protein of unknown function DUF796; KEGG: aav:Aave_1465 protein of unknown function DUF796
YP_001564854.1	PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: aav:Aave_1466 serine/threonine protein kinase
YP_001564855.1	KEGG: aav:Aave_1466 serine/threonine protein kinase
YP_001564856.1	KEGG: aav:Aave_1467 tetratricopeptide TPR_2 repeat protein
YP_001564857.1	TIGRFAM: type VI secretion system FHA domain protein; PFAM: Forkhead-associated protein; KEGG: aav:Aave_1468 FHA domain containing protein
YP_001564858.1	PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: aav:Aave_1469 protein serine/threonine phosphatase
YP_001564859.1	KEGG: aav:Aave_1470 lipoprotein, putative
YP_001564860.1	TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876; KEGG: aav:Aave_1471 protein of unknown function DUF876
YP_001564861.1	TIGRFAM: type IV / VI secretion system protein, DotU family; type VI secretion system OmpA/MotB family protein; PFAM: OmpA/MotB domain protein; KEGG: aav:Aave_1472 OmpA/MotB domain protein
YP_001564862.1	TIGRFAM: type VI secretion protein IcmF; PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: aav:Aave_1473 ImcF domain protein
YP_001564863.1	KEGG: aav:Aave_1474 hypothetical protein
YP_001564864.1	TIGRFAM: type VI secretion-associated protein, ImpA family; PFAM: ImpA domain protein; KEGG: aav:Aave_1475 ImpA domain protein
YP_001564865.1	KEGG: aav:Aave_3097 hypothetical protein
YP_001564866.1	TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein; KEGG: aav:Aave_1476 uncharacterized conserved protein UCP028301
YP_001564867.1	TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877; KEGG: aav:Aave_1477 protein of unknown function DUF877
YP_001564868.1	KEGG: aav:Aave_1071 hypothetical protein
YP_001564869.1	KEGG: aav:Aave_1107 hypothetical protein
YP_001564870.1	KEGG: pfl:PFL_5498 putative cytoplasmic protein
YP_001564871.1	KEGG: pae:PA2724 hypothetical protein
YP_001564872.1	PFAM: virulence protein SciE type; KEGG: aav:Aave_1478 virulence protein, SciE type
YP_001564873.1	KEGG: aav:Aave_0193 hypothetical protein
YP_001564874.1	TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein; KEGG: aav:Aave_1479 protein of unknown function DUF1316
YP_001564875.1	TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879; KEGG: aav:Aave_1480 protein of unknown function DUF879
YP_001564876.1	TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305; KEGG: aav:Aave_1481 protein of unknown function DUF1305
YP_001564877.1	KEGG: aav:Aave_0973 hypothetical protein
YP_001564878.1	KEGG: aav:Aave_0972 hypothetical protein
YP_001564879.1	KEGG: aav:Aave_0972 hypothetical protein
YP_001564880.1	KEGG: aav:Aave_1482 ATPase AAA-2 domain protein; TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase
YP_001564881.1	PFAM: peptidase S41; KEGG: rrs:RoseRS_3207 peptidase S41
YP_001564882.1	KEGG: aav:Aave_3422 hypothetical protein
YP_001564883.1	KEGG: aav:Aave_3423 hypothetical protein
YP_001564884.1	TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; KEGG: aav:Aave_2127 rhs element Vgr protein
YP_001564885.1	KEGG: aav:Aave_2128 hypothetical protein
YP_001564886.1	KEGG: aav:Aave_2129 hypothetical protein
YP_001564887.1	KEGG: aav:Aave_2130 hypothetical protein
YP_001564889.1	KEGG: aav:Aave_2133 hypothetical protein
YP_001564890.1	TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; KEGG: aav:Aave_2740 YD repeat protein
YP_001564892.1	KEGG: aav:Aave_2132 hypothetical protein
YP_001564894.1	KEGG: aav:Aave_2740 YD repeat protein
YP_001564896.1	KEGG: aav:Aave_2741 hypothetical protein
YP_001564897.1	KEGG: mms:mma_1666 hypothetical protein
YP_001564898.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dde:Dde_0154 molybdenum ABC-transporter, permease protein (ModB)-like
YP_001564899.1	TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; KEGG: azo:azo3846 putative molybdate transport system substrate-binding protein
YP_001564900.1	KEGG: rpb:RPB_3526 hypothetical protein
YP_001564901.1	PFAM: AMP-dependent synthetase and ligase; KEGG: pae:PA3860 acyl-CoA synthase
YP_001564902.1	PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_3733 uncharacterized protein UPF0065
YP_001564903.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_3740 transcriptional regulator, LysR family
YP_001564904.1	PFAM: regulatory protein TetR; KEGG: psb:Psyr_2933 regulatory protein, TetR
YP_001564905.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: psb:Psyr_2934 NADH:flavin oxidoreductase/NADH oxidase
YP_001564906.1	KEGG: bpd:BURPS668_A0697 hypothetical protein
YP_001564907.1	PFAM: flavin reductase domain protein FMN-binding; KEGG: bur:Bcep18194_A4508 flavin reductase-like, FMN-binding
YP_001564908.1	KEGG: aav:Aave_2747 zinc metalloproteinase Mpr protein
YP_001564909.1	PFAM: OsmC family protein; KEGG: aav:Aave_0009 OsmC family protein
YP_001564910.1	KEGG: hch:HCH_03995 hypothetical protein
YP_001564911.1	PFAM: major facilitator superfamily MFS_1; KEGG: xac:XAC3001 MFS transporter
YP_001564915.1	PFAM: restriction endonuclease; KEGG: aav:Aave_1379 restriction endonuclease
YP_001564916.1	KEGG: pst:PSPTO_4754 hypothetical protein
YP_001564917.1	PFAM: protein of unknown function DUF1232; KEGG: bbr:BB1021 hypothetical protein
YP_001564918.1	KEGG: aav:Aave_3264 hypothetical protein
YP_001564919.1	KEGG: aav:Aave_1403 hypothetical protein
YP_001564920.1	KEGG: aav:Aave_3265 hypothetical protein
YP_001564922.1	KEGG: aav:Aave_3265 hypothetical protein
YP_001564923.1	KEGG: aav:Aave_3265 hypothetical protein
YP_001564924.1	KEGG: aav:Aave_4010 hypothetical protein
YP_001564925.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: mpt:Mpe_A0968 putative transcription regulator transcription regulator protein
YP_001564926.1	PFAM: conserved hypothetical protein; KEGG: reu:Reut_B3884 hypothetical protein
YP_001564927.1	PFAM: HpcH/HpaI aldolase; KEGG: aav:Aave_4270 2-dehydro-3-deoxyglucarate aldolase
YP_001564928.1	catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate
YP_001564929.1	TIGRFAM: YidE/YbjL duplication; PFAM: TrkA-C domain protein; YidE/YbjL duplication domain protein; KEGG: oan:Oant_3482 YidE/YbjL duplication
YP_001564930.1	catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate
YP_001564931.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: rso:RSc0614 hypothetical protein
YP_001564932.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc0615 probable transcription regulator protein
YP_001564933.1	KEGG: reu:Reut_B5656 hypothetical protein
YP_001564934.1	TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: reu:Reut_B5655 heavy metal efflux pump CzcA
YP_001564935.1	TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: reu:Reut_B5654 secretion protein HlyD
YP_001564936.1	KEGG: rme:Rmet_5683 hypothetical protein
YP_001564937.1	PFAM: nitroreductase; regulatory protein LysR; KEGG: rfr:Rfer_3637 nitroreductase
YP_001564938.1	PFAM: protein of unknown function UPF0187; KEGG: rme:Rmet_5346 protein of unknown function UPF0187
YP_001564939.1	KEGG: sbl:Sbal_0847 hypothetical protein
YP_001564940.1	PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bur:Bcep18194_B3090 esterase/lipase/thioesterase
YP_001564941.1	PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_B3091 alpha/beta hydrolase
YP_001564942.1	PFAM: AP endonuclease 2 domain protein; Xylose isomerase domain protein TIM barrel; KEGG: bur:Bcep18194_B3092 xylose isomerase-like TIM barrel
YP_001564943.1	PFAM: regulatory protein TetR; KEGG: bur:Bcep18194_B3093 transcriptional regulator, TetR family
YP_001564944.1	KEGG: pfl:PFL_3184 acyl-CoA dehydrogenase, putative
YP_001564945.1	PFAM: cytochrome c class I; KEGG: spe:Spro_2490 gluconate 2-dehydrogenase (acceptor)
YP_001564946.1	PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: spe:Spro_2491 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding
YP_001564947.1	PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: spe:Spro_2492 (2Fe-2S)-binding domain protein
YP_001564949.1	KEGG: aav:Aave_3957 hypothetical protein
YP_001564950.1	PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: aav:Aave_1150 histone family protein nucleoid-structuring protein H-NS
YP_001564951.1	PFAM: Hpt domain protein; KEGG: bam:Bamb_5151 periplasmic sensor hybrid histidine kinase
YP_001564952.1	PFAM: regulatory protein LuxR; response regulator receiver; KEGG: bpd:BURPS668_A0187 regulatory protein, LuxR:response regulator receiver
YP_001564953.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: bpd:BURPS668_A0180 response regulator/sensor histidine kinase
YP_001564954.1	PFAM: regulatory protein LuxR; response regulator receiver; KEGG: pae:PA4080 probable response regulator
YP_001564955.1	KEGG: aav:Aave_2791 lactoylglutathione lyase; TIGRFAM: lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase
YP_001564956.1	PFAM: OmpA/MotB domain protein; KEGG: ajs:Ajs_2055 OmpA/MotB domain protein
YP_001564957.1	PFAM: ChaC family protein; KEGG: ajs:Ajs_2056 ChaC family protein
YP_001564958.1	PFAM: superoxide dismutase copper/zinc binding; KEGG: pol:Bpro_3554 superoxide dismutase
YP_001564959.1	KEGG: vei:Veis_2563 hypothetical protein
YP_001564960.1	KEGG: aav:Aave_2803 pyridoxamine 5'-phosphate oxidase; TIGRFAM: pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding
YP_001564961.1	PFAM: Auxin Efflux Carrier; KEGG: aav:Aave_2804 auxin efflux carrier
YP_001564962.1	PFAM: Pirin domain protein; KEGG: bte:BTH_I1747 pirin family protein
YP_001564963.1	PFAM: integrase family protein; KEGG: pna:Pnap_4572 phage integrase
YP_001564964.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ajs:Ajs_2033 TonB-dependent receptor
YP_001564965.1	KEGG: ajs:Ajs_2032 hypothetical protein
YP_001564966.1	KEGG: aav:Aave_2810 hypothetical protein
YP_001564967.1	KEGG: aav:Aave_2813 putative ferric uptake regulator, Fur family
YP_001564968.1	TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; KEGG: aav:Aave_2814 peptide methionine sulfoxide reductase
YP_001564969.1	PFAM: regulatory protein TetR; KEGG: pna:Pnap_1129 transcriptional regulator, TetR family
YP_001564970.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: vei:Veis_2348 efflux transporter, RND family, MFP subunit
YP_001564971.1	PFAM: acriflavin resistance protein; KEGG: pol:Bpro_1667 acriflavin resistance protein
YP_001564972.1	PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: aav:Aave_2816 methyltransferase type 11
YP_001564973.1	SMART: Rhodanese domain protein; KEGG: ajs:Ajs_2027 rhodanese domain protein
YP_001564974.1	TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: aav:Aave_2818 type I secretion outer membrane protein, TolC family
YP_001564975.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ent:Ent638_1861 two component transcriptional regulator, winged helix family
YP_001564976.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ent:Ent638_1862 integral membrane sensor signal transduction histidine kinase
YP_001564977.1	TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: neu:NE2111 hypothetical protein
YP_001564978.1	PFAM: PilT protein domain protein; KEGG: neu:NE2112 PIN (PilT N terminus) domain
YP_001564979.1	PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: aav:Aave_2820 three-deoxy-D-manno-octulosonic-acid transferase domain protein
YP_001564980.1	PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: ajs:Ajs_2021 phosphomannomutase
YP_001564981.1	catalyzes the formation of propionyl-CoA using propionate as a substrate; PrpE from Ralstonia solanacearum can produce acetyl-, propionyl-, butyryl- and acrylyl-coenzyme A, and Salmonella enterica produces propionyl- and butyryl-coenzyme A; not expressed in Escherichia coli when grown on propionate/minimal media; ATP-dependent
YP_001564982.1	KEGG: bch:Bcen2424_3201 porin, opacity type
YP_001564983.1	PFAM: isochorismatase hydrolase; KEGG: ajs:Ajs_2015 isochorismatase hydrolase
YP_001564984.1	PFAM: NLP/P60 protein; KEGG: aav:Aave_2830 NLP/P60 protein
YP_001564985.1	KEGG: aav:Aave_2831 transglycosylase-associated protein
YP_001564986.1	KEGG: aav:Aave_2832 hypothetical protein
YP_001564987.1	PFAM: Glutathione S-transferase domain; KEGG: pfo:Pfl_2223 glutathione S-transferase family protein
YP_001564988.1	PFAM: protein of unknown function DUF55; KEGG: ajs:Ajs_2092 protein of unknown function DUF55
YP_001564989.1	KEGG: oan:Oant_0479 hypothetical protein
YP_001564990.1	PFAM: major facilitator superfamily MFS_1; KEGG: art:Arth_1721 major facilitator superfamily MFS_1
YP_001564991.1	KEGG: bxe:Bxe_C1278 hypothetical protein
YP_001564992.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_C7469 lysine exporter family protein (LysE/YggA)
YP_001564993.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_5693 transcriptional regulator, LysR family
YP_001564994.1	TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: biotin/lipoyl attachment domain-containing protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: aav:Aave_2464 dihydrolipoamide dehydrogenase
YP_001564995.1	KEGG: aav:Aave_2463 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein
YP_001564996.1	E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC
YP_001564997.1	KEGG: ajs:Ajs_2126 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001564998.1	PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: ajs:Ajs_2127 response regulator receiver protein
YP_001564999.1	catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate
YP_001565000.1	PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: aav:Aave_2458 oligopeptidase A
YP_001565001.1	PFAM: glutaredoxin; KEGG: aav:Aave_2457 glutaredoxin
YP_001565003.1	Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway
YP_001565004.1	catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors
YP_001565005.1	KEGG: ajs:Ajs_2133 hypothetical protein
YP_001565006.1	KEGG: aav:Aave_2453 hypothetical protein
YP_001565007.1	PFAM: protein of unknown function DUF883 ElaB; KEGG: ajs:Ajs_2135 protein of unknown function DUF883, ElaB
YP_001565008.1	PFAM: FAD dependent oxidoreductase; KEGG: ajs:Ajs_2136 FAD dependent oxidoreductase
YP_001565009.1	KEGG: vei:Veis_2379 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease
YP_001565010.1	TIGRFAM: ferredoxin, 2Fe-2S type, ISC system; PFAM: ferredoxin; KEGG: ajs:Ajs_2139 ferredoxin, 2Fe-2S type, ISC system
YP_001565011.1	involved in the maturation of iron-sulfur cluster-containing proteins
YP_001565012.1	TIGRFAM: co-chaperone Hsc20; PFAM: heat shock protein DnaJ domain protein; HSC20 oligomerisation; KEGG: ajs:Ajs_2141 co-chaperone Hsc20
YP_001565013.1	TIGRFAM: iron-sulfur cluster assembly accessory protein; iron-sulfur cluster assembly protein IscA; PFAM: HesB/YadR/YfhF-family protein; KEGG: ajs:Ajs_2142 iron-sulfur cluster assembly protein IscA
YP_001565014.1	TIGRFAM: FeS cluster assembly scaffold IscU; PFAM: nitrogen-fixing NifU domain protein; KEGG: ajs:Ajs_2143 FeS cluster assembly scaffold IscU
YP_001565015.1	TIGRFAM: cysteine desulfurase IscS; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: vei:Veis_2373 cysteine desulfurase IscS
YP_001565016.1	TIGRFAM: transcriptional regulator, Rrf2 family; iron-sulfur cluster assembly transcription factor IscR; PFAM: protein of unknown function UPF0074; KEGG: ajs:Ajs_2145 transcriptional regulator, BadM/Rrf2 family
YP_001565017.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion
YP_001565018.1	catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate
YP_001565019.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: ajs:Ajs_2153 L-carnitine dehydratase/bile acid-inducible protein F
YP_001565020.1	KEGG: pap:PSPA7_4658 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001565021.1	PFAM: Radical SAM domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: ajs:Ajs_2243 radical SAM N-terminal domain protein
YP_001565022.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bam:Bamb_1077 transcriptional regulator, AraC family
YP_001565024.1	PFAM: monooxygenase FAD-binding; KEGG: bxe:Bxe_A2727 putative 3-(3-hydroxy-phenyl)propionate hydroxylase (MhpA)
YP_001565025.1	PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; KEGG: bxe:Bxe_B1220 transcriptional regulator, LuxR family
YP_001565027.1	PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: ajs:Ajs_2244 protein of unknown function UPF0029
YP_001565028.1	KEGG: pol:Bpro_4523 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein
YP_001565029.1	PFAM: conserved hypothetical protein; KEGG: pol:Bpro_4524 uncharacterized protein UPF0065
YP_001565030.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_B0607 transcriptional regulator, LysR-family
YP_001565032.1	KEGG: afw:Anae109_1986 extracellular HAF
YP_001565034.1	Catalyzes the oxidation of dihydrolipoamide to lipoamide
YP_001565035.1	PFAM: ABC transporter related; SbmABacA family protein; ABC transporter domain protein; SMART: AAA ATPase; KEGG: pen:PSEEN1831 ABC efflux transporter, permease/ATP-binding protein
YP_001565036.1	PFAM: K potassium transporter; KEGG: rfr:Rfer_2539 K+ potassium transporter
YP_001565037.1	KEGG: azo:azo2926 conserved hypothetical secreted protein
YP_001565038.1	PFAM: Chromate transporter; KEGG: ajs:Ajs_2259 chromate transporter
YP_001565039.1	PFAM: Chromate transporter; KEGG: ajs:Ajs_2260 chromate transporter
YP_001565040.1	PFAM: aldo/keto reductase; KEGG: aav:Aave_3016 aldo/keto reductase
YP_001565041.1	PFAM: Silent information regulator protein Sir2; KEGG: ajs:Ajs_2262 silent information regulator protein Sir2
YP_001565042.1	PFAM: regulatory protein TetR; KEGG: rso:RS03880 putative transcription regulator protein
YP_001565043.1	PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: bbr:BB4023 hypothetical protein
YP_001565044.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 3-demethylubiquinone-9 3-methyltransferase; KEGG: ajs:Ajs_2265 3-demethylubiquinone-9 3-methyltransferase
YP_001565045.1	KEGG: vco:VC0395_0589 hypothetical protein
YP_001565046.1	PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: swi:Swit_1108 activator of HSP90 ATPase 1 family protein
YP_001565047.1	PFAM: protein of unknown function DUF1428; KEGG: rpe:RPE_4844 protein of unknown function DUF1428
YP_001565048.1	TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: aav:Aave_3018 RNA methyltransferase, TrmH family, group 3
YP_001565049.1	involved in the import of serine and threonine coupled with the import of sodium
YP_001565050.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_2270 ABC transporter related
YP_001565051.1	PFAM: lipolytic protein G-D-S-L family; KEGG: ajs:Ajs_2271 lipolytic enzyme, G-D-S-L family
YP_001565052.1	KEGG: vei:Veis_3410 integral membrane protein
YP_001565053.1	KEGG: ajs:Ajs_3582 alkaline phosphatase
YP_001565054.1	PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: ajs:Ajs_2273 Cys/Met metabolism pyridoxal-phosphate-dependent enzymes
YP_001565055.1	PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: pol:Bpro_0874 transport-associated
YP_001565056.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: ajs:Ajs_2275 sulphate transporter
YP_001565057.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: aav:Aave_3024 diguanylate cyclase
YP_001565058.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: aav:Aave_3025 cobyrinic acid a,c-diamide synthase
YP_001565059.1	SMART: Rhodanese domain protein; KEGG: aav:Aave_3026 rhodanese domain protein
YP_001565060.1	PFAM: flavodoxin/nitric oxide synthase; KEGG: vei:Veis_4981 flavodoxin/nitric oxide synthase
YP_001565061.1	PFAM: DoxX family protein; KEGG: ajs:Ajs_1986 DoxX family protein
YP_001565062.1	PFAM: Pirin domain protein; Cupin 2 conserved barrel domain protein; KEGG: ajs:Ajs_1985 pirin domain protein domain protein
YP_001565063.1	PFAM: regulatory protein LysR; helix-turn-helix Fis-type; LysR substrate-binding; KEGG: aav:Aave_3030 transcriptional regulator, LysR family
YP_001565064.1	PFAM: FAD dependent oxidoreductase; KEGG: aav:Aave_3031 FAD dependent oxidoreductase
YP_001565065.1	PFAM: glutamyl-tRNA synthetase class Ic; KEGG: ajs:Ajs_1982 glutamate--tRNA ligase
YP_001565066.1	tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine
YP_001565067.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: aav:Aave_3034 diguanylate cyclase
YP_001565068.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: dar:Daro_2880 GGDEF
YP_001565069.1	KEGG: dar:Daro_2881 periplasmic sugar-binding protein, putative
YP_001565070.1	Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_001565072.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: aav:Aave_2224 major facilitator superfamily MFS_1
YP_001565073.1	TIGRFAM: ubiquinol oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; COX aromatic rich domain protein; KEGG: aav:Aave_2223 ubiquinol oxidase, subunit II
YP_001565074.1	KEGG: ajs:Ajs_2776 cytochrome-c oxidase; TIGRFAM: cytochrome o ubiquinol oxidase, subunit I; PFAM: cytochrome c oxidase subunit I
YP_001565075.1	TIGRFAM: cytochrome o ubiquinol oxidase, subunit III; PFAM: cytochrome c oxidase subunit III; KEGG: aav:Aave_2221 cytochrome c oxidase, subunit III
YP_001565076.1	TIGRFAM: cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV; KEGG: aav:Aave_2220 cytochrome c oxidase subunit IV
YP_001565077.1	PFAM: Surfeit locus 1 family protein; KEGG: aav:Aave_2219 surfeit locus 1 family protein
YP_001565078.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mpt:Mpe_A1739 two-component sensor histidine kinase
YP_001565079.1	PFAM: response regulator receiver; helix-turn-helix Fis-type; KEGG: mpt:Mpe_A1738 two-component response regulator
YP_001565080.1	converts protoheme IX and farnesyl diphosphate to heme O
YP_001565081.1	PFAM: cytochrome oxidase assembly; KEGG: aav:Aave_3900 cytochrome oxidase assembly
YP_001565086.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pae:PA2650 hypothetical protein
YP_001565087.1	PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: ajs:Ajs_1144 histone family protein nucleoid-structuring protein H-NS
YP_001565088.1	PFAM: protein of unknown function DUF333; KEGG: sbl:Sbal_4226 protein of unknown function DUF333
YP_001565089.1	KEGG: pol:Bpro_5208 protein of unknown function DUF159
YP_001565091.1	KEGG: aav:Aave_1637 hypothetical protein
YP_001565092.1	KEGG: aav:Aave_1790 hypothetical protein
YP_001565093.1	PFAM: protein of unknown function DUF847; KEGG: bvi:Bcep1808_1188 protein of unknown function DUF847
YP_001565096.1	KEGG: nwi:Nwi_0792 gene transfer agent (GTA) like protein
YP_001565097.1	PFAM: NLP/P60 protein; KEGG: sit:TM1040_1071 putative phage cell wall peptidase, NlpC/P60
YP_001565098.1	PFAM: conserved hypothetical protein; KEGG: nwi:Nwi_1179 hypothetical protein
YP_001565099.1	PFAM: conserved hypothetical protein; KEGG: rsq:Rsph17025_1086 hypothetical protein
YP_001565100.1	TIGRFAM: phage tail tape measure protein, lambda family; phage tape measure protein; PFAM: Tape measure domain; KEGG: esa:ESA_01039 hypothetical protein
YP_001565101.1	PFAM: Protein of unknown function DUF1799 phage-related; KEGG: aav:Aave_1781 hypothetical protein
YP_001565102.1	PFAM: Domain of unknown function DUF1789; KEGG: aav:Aave_1626 hypothetical protein
YP_001565103.1	PFAM: tail protein 3; KEGG: psb:Psyr_2783 hypothetical protein
YP_001565104.1	KEGG: mlo:mlr8015 hypothetical protein
YP_001565105.1	KEGG: xau:Xaut_3707 hypothetical protein
YP_001565106.1	KEGG: mes:Meso_1223 hypothetical protein
YP_001565107.1	KEGG: xau:Xaut_3713 hypothetical protein
YP_001565108.1	PFAM: Pathogenesis-related transcriptional factor and ERF protein; KEGG: bvi:Bcep1808_4543 HNH endonuclease
YP_001565109.1	KEGG: mlo:mlr8011 hypothetical protein
YP_001565111.1	KEGG: gbe:GbCGDNIH1_1579 hypothetical protein
YP_001565113.1	KEGG: mes:Meso_1215 hypothetical protein
YP_001565114.1	TIGRFAM: phage-associated protein, HI1409 family; PFAM: conserved hypothetical protein; KEGG: mlo:mlr8004 hypothetical protein
YP_001565115.1	TIGRFAM: phage terminase, large subunit, PBSX family; PFAM: terminase large subunit; KEGG: par:Psyc_1001 phage terminase, large subunit, PBSX family
YP_001565116.1	PFAM: Terminase small subunit; KEGG: sit:TM1040_0800 terminase small subunit
YP_001565117.1	KEGG: aav:Aave_1764 hypothetical protein
YP_001565118.1	PFAM: Lambda NinG family protein; KEGG: pfl:PFL_3773 NinG protein
YP_001565119.1	KEGG: sit:TM1040_1689 hypothetical protein
YP_001565125.1	KEGG: bbr:BB1686 hypothetical protein
YP_001565126.1	PFAM: DnaB domain protein helicase domain protein; KEGG: bvi:Bcep1808_1163 DnaB domain protein helicase, C-terminal domain protein
YP_001565127.1	KEGG: ajs:Ajs_0930 hypothetical protein
YP_001565129.1	PFAM: peptidase S24 and S26 domain protein; KEGG: bpd:BURPS668_A2366 helix-turn-helix motif:peptidase S24, S26A and S26B
YP_001565131.1	KEGG: bbr:BB1705 phage-related putative exported protein
YP_001565141.1	PFAM: ERF family protein; KEGG: mms:mma_2226 hypothetical protein
YP_001565144.1	PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: pnu:Pnuc_0838 histone family protein nucleoid-structuring protein H-NS
YP_001565147.1	KEGG: xfa:XF1762 hypothetical protein
YP_001565148.1	PFAM: HNH endonuclease; KEGG: pde:Pden_3731 HNH endonuclease
YP_001565150.1	KEGG: pna:Pnap_4291 hypothetical protein
YP_001565153.1	PFAM: Prophage CP4-57 regulatory; KEGG: bte:BTH_I1915 prophage CP4-57 regulatory protein (AlpA) family
YP_001565154.1	PFAM: integrase family protein; KEGG: bte:BTH_I1914 integrative genetic element Gsu32, integrase, putative
YP_001565155.1	PFAM: integrase family protein; KEGG: eba:c1A49 integrase (int)
YP_001565156.1	KEGG: xcv:XCV2416 hypothetical protein
YP_001565157.1	PFAM: Prophage CP4-57 regulatory; KEGG: xcv:XCV2415 putative regulatory protein, AlpA family
YP_001565158.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: xcv:XCV2414 chromosome partitioning related protein
YP_001565159.1	KEGG: xcv:XCV2413 hypothetical protein
YP_001565160.1	KEGG: xcv:XCV2412 hypothetical protein
YP_001565161.1	KEGG: xfa:XF1782 hypothetical protein
YP_001565162.1	KEGG: xcv:XCV2410 hypothetical protein
YP_001565163.1	PFAM: Domain of unknown function DUF1845; KEGG: xcv:XCV2409 hypothetical protein
YP_001565164.1	KEGG: ajs:Ajs_1447 putative integrase regulator R protein
YP_001565165.1	binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA
YP_001565166.1	decatenates replicating daughter chromosomes
YP_001565167.1	KEGG: xcv:XCV2404 hypothetical protein
YP_001565168.1	KEGG: bxe:Bxe_A1220 hypothetical protein
YP_001565169.1	KEGG: xcv:XCV2402 hypothetical protein
YP_001565170.1	KEGG: ajs:Ajs_1439 hypothetical protein
YP_001565171.1	KEGG: ajs:Ajs_1303 hypothetical protein
YP_001565172.1	KEGG: ajs:Ajs_1437 hypothetical protein
YP_001565173.1	KEGG: xcv:XCV2395 hypothetical protein
YP_001565174.1	PFAM: protein of unknown function DUF932; KEGG: har:HEAR1987 hypothetical protein
YP_001565175.1	KEGG: ajs:Ajs_1293 hypothetical protein
YP_001565176.1	KEGG: har:HEAR1990 hypothetical protein
YP_001565177.1	PFAM: helicase domain protein; KEGG: rme:Rmet_2330 helicase-like protein
YP_001565178.1	KEGG: xau:Xaut_3047 ATP-dependent endonuclease family protein
YP_001565179.1	PFAM: UvrD/REP helicase; KEGG: xau:Xaut_3048 UvrD/REP helicase
YP_001565180.1	KEGG: ajs:Ajs_1279 putative secreted protein
YP_001565181.1	KEGG: bxe:Bxe_A1199 hypothetical protein
YP_001565182.1	KEGG: ajs:Ajs_1411 putative secreted protein
YP_001565183.1	PFAM: Lytic transglycosylase catalytic; KEGG: bxe:Bxe_A1197 hypothetical protein
YP_001565184.1	KEGG: bxe:Bxe_A1196 hypothetical protein
YP_001565185.1	KEGG: ajs:Ajs_1274 hypothetical protein
YP_001565186.1	KEGG: pla:Plav_3415 hypothetical protein
YP_001565187.1	PFAM: plasmid conserved hypothetical protein RAQPRD; KEGG: har:HEAR2012 conserved hypothetical protein; putative signal peptide
YP_001565188.1	KEGG: bxe:Bxe_A1191 hypothetical protein
YP_001565189.1	KEGG: har:HEAR2014 hypothetical protein
YP_001565190.1	KEGG: bxe:Bxe_A1189 hypothetical protein
YP_001565191.1	KEGG: ajs:Ajs_1402 putative secreted protein
YP_001565192.1	KEGG: har:HEAR2017 conserved hypothetical protein; putative signal peptide
YP_001565193.1	KEGG: rme:Rmet_2351 putative secreted protein
YP_001565194.1	KEGG: har:HEAR2019 conserved hypothetical protein; putative signal peptide
YP_001565195.1	KEGG: ajs:Ajs_1256 hypothetical protein
YP_001565196.1	KEGG: bxe:Bxe_A1183 hypothetical protein
YP_001565197.1	PFAM: DNA repair protein RadC; KEGG: ajs:Ajs_1396 DNA repair protein RadC
YP_001565198.1	PFAM: protein of unknown function DUF1525; KEGG: har:HEAR2023 hypothetical protein
YP_001565199.1	PFAM: protein of unknown function DUF1527; KEGG: xcv:XCV2363 putative secreted protein
YP_001565200.1	KEGG: rme:Rmet_2358 hypothetical protein
YP_001565201.1	KEGG: pla:Plav_3430 hypothetical protein
YP_001565202.1	KEGG: pla:Plav_3431 hypothetical protein
YP_001565203.1	KEGG: pla:Plav_3432 hypothetical protein
YP_001565204.1	KEGG: neu:NE0292 hypothetical protein
YP_001565205.1	TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: neu:NE0293 hypothetical protein
YP_001565206.1	PFAM: protein of unknown function DUF1528; Relaxase; KEGG: xcv:XCV2356 hypothetical protein
YP_001565207.1	PFAM: Cold-shock protein DNA-binding; KEGG: hpy:HP0453 hypothetical protein
YP_001565208.1	KEGG: hpy:HP0452 hypothetical protein
YP_001565210.1	SMART: AAA ATPase; KEGG: pna:Pnap_4258 superfamily I DNA and RNA helicases and helicase subunits-like protein
YP_001565211.1	KEGG: pna:Pnap_4257 protein kinase
YP_001565212.1	KEGG: pna:Pnap_4256 hypothetical protein
YP_001565214.1	KEGG: hpy:HP0986 hypothetical protein
YP_001565215.1	PFAM: cell divisionFtsK/SpoIIIE; KEGG: hpj:jhp0061 hypothetical protein
YP_001565217.1	KEGG: tfu:Tfu_1419 hypothetical protein
YP_001565218.1	KEGG: hpj:jhp0057 hypothetical protein
YP_001565219.1	PFAM: von Willebrand factor type A; KEGG: pna:Pnap_4255 von Willebrand factor, type A
YP_001565220.1	PFAM: type III restriction protein res subunit; KEGG: aav:Aave_0162 type III restriction enzyme, res subunit
YP_001565221.1	PFAM: DNA methylase N-4/N-6 domain protein; KEGG: cte:CT0908 type III restriction system methylase
YP_001565222.1	KEGG: cte:CT0907 hypothetical protein
YP_001565223.1	PFAM: helicase domain protein; SMART: DEAD-like helicases; KEGG: aav:Aave_0157 helicase domain protein
YP_001565224.1	KEGG: neu:NE2519 hypothetical protein
YP_001565225.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pla:Plav_3462 transcriptional regulator, LysR family
YP_001565226.1	PFAM: helix-turn-helix domain protein; KEGG: rme:Rmet_2401 transcriptional regulator, XRE family
YP_001565227.1	PFAM: LysR substrate-binding; KEGG: xfa:XF1719 hypothetical protein
YP_001565228.1	KEGG: bur:Bcep18194_B2350 hypothetical protein
YP_001565229.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bxe:Bxe_B1629 sigma-24 (FecI)
YP_001565230.1	KEGG: bch:Bcen2424_4478 hypothetical protein
YP_001565231.1	KEGG: bxe:Bxe_B1627 putative membrane-associated protein
YP_001565232.1	PFAM: Protein of unknown function DUF1800; KEGG: bxe:Bxe_B1626 hypothetical protein
YP_001565233.1	PFAM: protein of unknown function DUF1501; KEGG: bxe:Bxe_B1625 hypothetical protein
YP_001565234.1	KEGG: rso:RSc3291 hypothetical protein
YP_001565235.1	KEGG: sma:SAV3034 hypothetical protein
YP_001565236.1	KEGG: mmr:Mmar10_2551 hypothetical protein
YP_001565237.1	KEGG: aav:Aave_3037 hypothetical protein
YP_001565238.1	KEGG: bxe:Bxe_B0568 hypothetical protein
YP_001565240.1	PFAM: Threonyl/alanyl tRNA synthetase SAD; KEGG: rme:Rmet_2509 threonyl/alanyl tRNA synthetase, SAD
YP_001565242.1	TIGRFAM: azurin; PFAM: blue (type 1) copper domain protein; KEGG: aav:Aave_2435 azurin
YP_001565244.1	PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: vei:Veis_4935 protein of unknown function DUF21
YP_001565245.1	KEGG: ajs:Ajs_1665 hypothetical protein
YP_001565246.1	KEGG: har:HEAR0763 hypothetical protein
YP_001565247.1	PFAM: isochorismatase hydrolase; KEGG: bch:Bcen2424_4549 isochorismatase hydrolase
YP_001565248.1	KEGG: rpa:RPA1061 possible polyketide synthesis protein
YP_001565249.1	PFAM: nitroreductase; KEGG: bte:BTH_II1923 nitroreductase family protein
YP_001565250.1	PFAM: ferric-uptake regulator; KEGG: aav:Aave_4555 ferric uptake regulator, Fur family
YP_001565251.1	KEGG: aav:Aave_3322 hypothetical protein
YP_001565252.1	PFAM: cytochrome c class I; KEGG: bur:Bcep18194_B0408 cytochrome c, class I
YP_001565253.1	PFAM: cytochrome c class I; KEGG: bam:Bamb_4605 cytochrome c, class I
YP_001565254.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ajs:Ajs_2432 integral membrane sensor signal transduction histidine kinase
YP_001565255.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: psa:PST_2709 probable two-component response regulator
YP_001565256.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: tbd:Tbd_2789 probable thiol:disulfide interchange protein
YP_001565257.1	Involved in disulfide bond formation
YP_001565258.1	PFAM: Domain of unknown function DUF1791; KEGG: bbr:BB2321 hypothetical protein
YP_001565259.1	KEGG: cvi:CV_1729 hypothetical protein
YP_001565260.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ajs:Ajs_2422 4Fe-4S ferredoxin, iron-sulfur binding domain protein
YP_001565261.1	PFAM: Polysulphide reductase NrfD; KEGG: ajs:Ajs_2423 polysulphide reductase, NrfD
YP_001565262.1	PFAM: molydopterin dinucleotide-binding region; KEGG: ajs:Ajs_2424 molydopterin dinucleotide-binding region
YP_001565263.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: swi:Swit_0451 RND efflux system, outer membrane lipoprotein, NodT family
YP_001565264.1	PFAM: secretion protein HlyD family protein; KEGG: psa:PST_3103 probable multidrug resistance efflux pump
YP_001565265.1	PFAM: major facilitator superfamily MFS_1; KEGG: psa:PST_3102 transporter, putative
YP_001565266.1	PFAM: regulatory protein TetR; KEGG: xcb:XC_3478 transcriptional regulator TetR/AcrR family
YP_001565267.1	PFAM: pseudouridine synthase; KEGG: aav:Aave_2674 pseudouridine synthase
YP_001565268.1	KEGG: mgm:Mmc1_3147 protein of unknown function DUF132
YP_001565269.1	KEGG: cph:Cpha266_2656 hypothetical protein
YP_001565270.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: reh:H16_A0034 transcriptional regulator, GntR-family
YP_001565271.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: reh:H16_A0033 short chain dehydrogenase
YP_001565272.1	PFAM: protein of unknown function DUF849; KEGG: reh:H16_A0032 prokaryotic protein of unknown function,predicted cytosolic protein
YP_001565273.1	PFAM: major facilitator superfamily MFS_1; KEGG: reh:H16_A0031 MFS transporter, ACS family
YP_001565274.1	PFAM: AsmA family protein; KEGG: aav:Aave_2673 AsmA family protein
YP_001565275.1	PFAM: regulatory protein LysR; KEGG: pol:Bpro_2496 putative transcriptional regulator, ModE family
YP_001565276.1	PFAM: protein of unknown function UPF0066; KEGG: sfu:Sfum_0270 protein of unknown function UPF0066
YP_001565277.1	KEGG: ajs:Ajs_1967 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein
YP_001565278.1	KEGG: ajs:Ajs_1966 hypothetical protein
YP_001565279.1	KEGG: aav:Aave_2670 hypothetical protein
YP_001565280.1	PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: ajs:Ajs_1963 metal dependent phosphohydrolase
YP_001565281.1	KEGG: ajs:Ajs_1962 3-oxoacid CoA-transferase, B subunit; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase
YP_001565282.1	KEGG: aav:Aave_3127 3-oxoacid CoA-transferase, A subunit; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase
YP_001565283.1	KEGG: ajs:Ajs_1960 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: regulatory protein LuxR; PAS fold domain protein; SMART: PAS domain containing protein
YP_001565284.1	PFAM: Catalase domain protein; KEGG: ajs:Ajs_1958 catalase
YP_001565285.1	KEGG: bch:Bcen2424_1345 hypothetical protein
YP_001565286.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bte:BTH_II1273 2,4-dienoyl-CoA reductase
YP_001565287.1	PFAM: transcriptional regulator PadR family protein; KEGG: bur:Bcep18194_A4476 transcriptional regulator, PadR-like family
YP_001565288.1	PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: reu:Reut_B4613 gluconolactonase
YP_001565289.1	PFAM: amidohydrolase 2; KEGG: bja:blr2281 putative 2-pyrone-4,6-dicarbaxylate hydrolase
YP_001565290.1	PFAM: conserved hypothetical protein; KEGG: pna:Pnap_4081 uncharacterized protein UPF0065
YP_001565291.1	PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_1121 uncharacterized protein UPF0065
YP_001565292.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: vei:Veis_3989 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
YP_001565293.1	PFAM: Dimethylmenaquinone methyltransferase; KEGG: vei:Veis_3988 dimethylmenaquinone methyltransferase
YP_001565294.1	PFAM: conserved hypothetical protein; KEGG: reu:Reut_B4611 hypothetical protein
YP_001565295.1	PFAM: amidohydrolase 2; KEGG: reu:Reut_B4612 amidohydrolase 2
YP_001565296.1	PFAM: conserved hypothetical protein; KEGG: vei:Veis_3985 uncharacterized protein UPF0065
YP_001565297.1	PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: vei:Veis_3984 regulatory proteins, IclR
YP_001565298.1	KEGG: aav:Aave_3131 hypothetical protein
YP_001565299.1	PFAM: alpha/beta hydrolase fold; KEGG: har:HEAR0772 putative haloacetate dehalogenase
YP_001565300.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_B2273 transcriptional regulator, LysR-family
YP_001565301.1	TIGRFAM: alkylhydroperoxidase like protein, AhpD family; uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase; KEGG: ajs:Ajs_1956 uncharacterized peroxidase-related enzyme
YP_001565302.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: mxa:MXAN_7072 transcriptional regulator, GntR family/aminotransferase, classes I and II family protein
YP_001565303.1	PFAM: N-acetyltransferase; KEGG: cph:Cpha266_1973 N-acetyltransferase
YP_001565304.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: pol:Bpro_0436 transcriptional regulator, LacI family
YP_001565305.1	PFAM: conserved hypothetical protein; KEGG: mpt:Mpe_A0969 putative lipoprotein
YP_001565306.1	PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: pol:Bpro_0435 mandelate racemase/muconate lactonizing enzyme
YP_001565307.1	KEGG: stm:STM0277 putative cytoplasmic protein
YP_001565309.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: dar:Daro_0477 helix-turn-helix, fis-type
YP_001565310.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: dar:Daro_0478 ATP-binding region, ATPase-like:histidine kinase A, N-terminal
YP_001565311.1	PFAM: sodium:dicarboxylate symporter; KEGG: dar:Daro_0480 sodium:dicarboxylate symporter
YP_001565313.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; CHASE3 domain protein; KEGG: aav:Aave_1956 methyl-accepting chemotaxis sensory transducer
YP_001565315.1	PFAM: regulatory protein MerR; KEGG: ajs:Ajs_2972 putative transcriptional regulator, MerR family
YP_001565316.1	PFAM: Lipocalin family protein; KEGG: ajs:Ajs_2973 lipocalin family protein
YP_001565317.1	KEGG: bvi:Bcep1808_5899 FAD dependent oxidoreductase
YP_001565318.1	KEGG: pol:Bpro_1821 putative transmembrane protein
YP_001565319.1	KEGG: rfr:Rfer_4043 hypothetical protein
YP_001565320.1	PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: bmb:BruAb2_0222 transcriptional regulator, MerR family
YP_001565321.1	PFAM: ThiJ/PfpI domain protein; KEGG: bms:BRA0227 ThiJ/PfpI family protein
YP_001565322.1	PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG: pen:PSEEN2714 hypothetical protein
YP_001565323.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_4979 transcriptional regulator, LysR family
YP_001565324.1	catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis
YP_001565325.1	PFAM: thioesterase superfamily protein; KEGG: vei:Veis_3983 thioesterase superfamily protein
YP_001565326.1	PFAM: FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: ajs:Ajs_1950 electron-transferring-flavoprotein dehydrogenase
YP_001565327.1	PFAM: protein of unknown function DUF534; KEGG: ajs:Ajs_1949 protein of unknown function DUF534
YP_001565328.1	PFAM: inner-membrane translocator; KEGG: aav:Aave_3142 inner-membrane translocator
YP_001565329.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_3143 ABC transporter-related protein
YP_001565330.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: kpn:KPN_01138 hypothetical protein
YP_001565331.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: pau:PA14_32450 putative transcriptional regulator, AraC family
YP_001565332.1	PFAM: major facilitator superfamily MFS_1; KEGG: pfl:PFL_5203 drug transporter, putative
YP_001565333.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfl:PFL_5204 transcriptional regulator, LysR family
YP_001565334.1	PFAM: amino acid permease-associated region; KEGG: ecx:EcHS_A2291 lysine-specific permease
YP_001565335.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ppu:PP_4040 glyoxalase family protein
YP_001565336.1	SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rle:RL2808 putative transcriptional regulatory protein
YP_001565337.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: ajs:Ajs_1942 putative transcriptional regulator, AsnC family
YP_001565338.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mfa:Mfla_2395 periplasmic sensor signal transduction histidine kinase
YP_001565339.1	PFAM: protein of unknown function DUF606; KEGG: ppf:Pput_3106 protein of unknown function DUF606
YP_001565340.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ppf:Pput_3105 transcriptional regulator, LysR family
YP_001565341.1	activates fatty acids by binding to coenzyme A
YP_001565342.1	TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: aav:Aave_3145 glycine cleavage system T protein
YP_001565343.1	TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; KEGG: ajs:Ajs_1937 glycine cleavage system H protein
YP_001565344.1	acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine
YP_001565345.1	KEGG: aav:Aave_3149 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001565346.1	PFAM: pseudouridine synthase; KEGG: ajs:Ajs_1933 pseudouridine synthase
YP_001565347.1	PFAM: Extracellular ligand-binding receptor; KEGG: ajs:Ajs_3253 extracellular ligand-binding receptor
YP_001565348.1	PFAM: inner-membrane translocator; KEGG: ajs:Ajs_3254 inner-membrane translocator
YP_001565349.1	Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine
YP_001565350.1	Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine
YP_001565351.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_3257 ABC transporter related
YP_001565352.1	catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal
YP_001565353.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: aav:Aave_3151 short-chain dehydrogenase/reductase SDR
YP_001565354.1	KEGG: spc:Sputcn32_0588 hypothetical protein
YP_001565355.1	catalyzes the ATP dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA
YP_001565356.1	TIGRFAM: Ku protein; PFAM: Ku domain protein; KEGG: ajs:Ajs_2524 Ku domain protein
YP_001565357.1	KEGG: tet:TTHERM_00163900 Bifunctional endo-1,4-beta-xylanase xylA precursor, putative PROSITE: ASN_RICH GLN_RICH
YP_001565358.1	PFAM: Catalase domain protein; KEGG: ajs:Ajs_3310 catalase
YP_001565359.1	KEGG: aav:Aave_1492 putative DNA topoisomerase, type I
YP_001565360.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: aav:Aave_1901 two component, sigma54 specific, transcriptional regulator, fis family
YP_001565361.1	KEGG: mpt:Mpe_A2420 hypothetical protein
YP_001565362.1	KEGG: nar:Saro_3185 transglycosylase-associated protein
YP_001565363.1	KEGG: rpc:RPC_3208 periplasmic sensor hybrid histidine kinase
YP_001565364.1	TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor; sigma-54 factor core-binding region; sigma-54 DNA-binding domain protein; KEGG: tbd:Tbd_0732 RNA polymease sigma-54 factor protein
YP_001565365.1	KEGG: ajs:Ajs_2974 hypothetical protein
YP_001565367.1	KEGG: nwi:Nwi_0342 hypothetical protein
YP_001565368.1	KEGG: bbt:BBta_5808 putative sensor histidine kinase with multiple PAS and a response regulator receiver domain; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein
YP_001565369.1	allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide
YP_001565370.1	PFAM: conserved hypothetical protein; KEGG: aav:Aave_3152 uncharacterized protein UPF0065
YP_001565371.1	TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: pau:PA14_42860 putative hemerythrin
YP_001565372.1	PFAM: UspA domain protein; KEGG: aav:Aave_3154 UspA domain protein
YP_001565373.1	KEGG: aav:Aave_3155 hypothetical protein
YP_001565374.1	catalyzes the formation of protocatechuate from 4-hydroxybenzoate
YP_001565375.1	TIGRFAM: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family; PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: pol:Bpro_2991 transcriptional regulator, IclR family
YP_001565376.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rpa:RPA4695 transcriptional regulator LigR, LysR family
YP_001565377.1	PFAM: conserved hypothetical protein; KEGG: pol:Bpro_1232 uncharacterized protein UPF0065
YP_001565378.1	PFAM: alanine racemase domain protein; KEGG: bpe:BP0453 low-specificity D-threonine aldolase
YP_001565379.1	PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: ajs:Ajs_3196 glutathione-dependent formaldehyde-activating, GFA
YP_001565380.1	SMART: low molecular weight phosphotyrosine protein phosphatase; KEGG: pna:Pnap_2721 low molecular weight phosphotyrosine protein phosphatase
YP_001565381.1	PFAM: protein kinase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; tyrosine protein kinase; serine/threonine protein kinase; KEGG: aav:Aave_3066 serine/threonine protein kinase
YP_001565382.1	KEGG: aav:Aave_3065 hypothetical protein
YP_001565383.1	KEGG: aav:Aave_3064 O-methyltransferase involved in polyketide biosynthesis-like protein
YP_001565384.1	PFAM: protein of unknown function DUF181; KEGG: aav:Aave_3061 protein of unknown function DUF181
YP_001565385.1	PFAM: Forkhead-associated protein; KEGG: aav:Aave_3060 FHA domain containing protein
YP_001565386.1	KEGG: aav:Aave_3059 hypothetical protein
YP_001565387.1	PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: ppu:PP_2174 hypothetical protein
YP_001565388.1	KEGG: rso:RSc0594 hypothetical protein
YP_001565389.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rso:RSc0595 putative outer membrane receptor signal peptide protein
YP_001565391.1	KEGG: ppf:Pput_2741 GCN5-related N-acetyltransferase
YP_001565392.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bam:Bamb_6588 GCN5-related N-acetyltransferase
YP_001565393.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B0810 transcriptional regulator, LysR family
YP_001565394.1	PFAM: monooxygenase FAD-binding; KEGG: bch:Bcen2424_4900 monooxygenase, FAD-binding
YP_001565395.1	KEGG: rso:RSc1866 hypothetical protein
YP_001565396.1	TIGRFAM: arsenical pump membrane protein; PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: ppu:PP_1929 arsenite efflux transporter
YP_001565397.1	PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: pna:Pnap_2588 protein tyrosine phosphatase
YP_001565398.1	SMART: regulatory protein ArsR; KEGG: ajs:Ajs_3055 regulatory protein, ArsR
YP_001565399.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pol:Bpro_0101 short-chain dehydrogenase/reductase SDR
YP_001565400.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pna:Pnap_1291 alcohol dehydrogenase, zinc-binding domain protein
YP_001565401.1	PFAM: regulatory protein TetR; KEGG: pna:Pnap_1293 transcriptional regulator, TetR family
YP_001565402.1	PFAM: monooxygenase FAD-binding; KEGG: bra:BRADO0592 putative flavoprotein monooxygenase
YP_001565403.1	PFAM: extracellular solute-binding protein family 3; KEGG: aav:Aave_3756 extracellular solute-binding protein, family 3
YP_001565404.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_3755 polar amino acid ABC transporter, inner membrane subunit
YP_001565405.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_3754 polar amino acid ABC transporter, inner membrane subunit
YP_001565406.1	KEGG: pmy:Pmen_3752 hypothetical protein
YP_001565407.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: aav:Aave_0749 diguanylate cyclase
YP_001565408.1	PFAM: glycosyl transferase family 9; KEGG: bam:Bamb_5648 glycosyl transferase, family 9
YP_001565409.1	PFAM: metallophosphoesterase; KEGG: ilo:IL0118 calcineurin-like phosphoesterase
YP_001565411.1	PFAM: BLUF domain protein; KEGG: vei:Veis_3097 BLUF domain protein
YP_001565412.1	PFAM: EAL domain protein; GAF domain protein; SMART: GGDEF domain containing protein; KEGG: aav:Aave_3096 diguanylate phosphodiesterase with GAF sensor
YP_001565413.1	PFAM: protein of unknown function DUF204; KEGG: net:Neut_0042 protein of unknown function DUF204
YP_001565414.1	PFAM: PRC-barrel domain protein; KEGG: bch:Bcen2424_5606 PRC-barrel domain protein
YP_001565415.1	KEGG: bur:Bcep18194_B0749 hypothetical protein
YP_001565416.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_4590 transcriptional regulator, LysR family
YP_001565417.1	PFAM: major facilitator superfamily MFS_1; KEGG: aav:Aave_4589 major facilitator superfamily MFS_1
YP_001565418.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pol:Bpro_2663 lysine exporter protein (LysE/YggA)
YP_001565419.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: har:HEAR0067 putative enzyme involved in biosynthesis of extracellular polysaccharides
YP_001565420.1	TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pna:Pnap_3909 alcohol dehydrogenase, zinc-binding domain protein
YP_001565421.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfo:Pfl_1954 transcriptional regulator, LysR family
YP_001565422.1	KEGG: aav:Aave_2975 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001565423.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: aav:Aave_2974 histidine kinase
YP_001565424.1	PFAM: ATP-binding region ATPase domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: aav:Aave_2973 anti-sigma regulatory factor, serine/threonine protein kinase and phosphatase
YP_001565425.1	PFAM: ATP-binding region ATPase domain protein; KEGG: aav:Aave_2972 putative anti-sigma regulatory factor, serine/threonine protein kinase
YP_001565426.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: aav:Aave_2971 anti-sigma-factor antagonist
YP_001565427.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: aav:Aave_2970 anti-sigma-factor antagonist
YP_001565428.1	PFAM: pentapeptide repeat protein; KEGG: bxe:Bxe_A1294 hypothetical protein
YP_001565429.1	KEGG: gga:396544 nascent polypeptide-associated complex alpha subunit
YP_001565430.1	PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: bxe:Bxe_B2784 methyl-accepting chemotaxis sensory transducer
YP_001565431.1	PFAM: NIPSNAP family containing protein; KEGG: bur:Bcep18194_B0447 protein of unknown function DUF1099
YP_001565432.1	PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: pde:Pden_4109 putative sulfonate/nitrate transport system substrate-binding protein
YP_001565433.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pde:Pden_4107 ABC transporter related
YP_001565434.1	KEGG: pde:Pden_4106 nitrilotriacetate monooxygenase
YP_001565435.1	PFAM: extracellular solute-binding protein family 3; KEGG: ajs:Ajs_0608 extracellular solute-binding protein, family 3
YP_001565436.1	TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: pol:Bpro_3541 Mg2+ transporter protein, CorA-like
YP_001565437.1	PFAM: protein of unknown function DUF344; KEGG: vei:Veis_1774 protein of unknown function DUF344
YP_001565438.1	PFAM: protein of unknown function DUF559; KEGG: rfr:Rfer_3040 DNA helicase related protein
YP_001565439.1	PFAM: protein of unknown function DUF156; KEGG: aha:AHA_0625 hypothetical protein
YP_001565440.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: pae:PA1297 probable metal transporter
YP_001565441.1	PFAM: extracellular solute-binding protein family 5; KEGG: sit:TM1040_3144 extracellular solute-binding protein, family 5
YP_001565442.1	PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: rru:Rru_A0138 leucyl aminopeptidase
YP_001565443.1	KEGG: oan:Oant_0082 hypothetical protein
YP_001565444.1	PFAM: Dimethylmenaquinone methyltransferase; KEGG: bra:BRADO3859 putative demethylmenaquinone methyltransferase
YP_001565445.1	PFAM: conserved hypothetical protein; KEGG: reu:Reut_B4610 hypothetical protein
YP_001565446.1	PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: pna:Pnap_0601 6-phosphogluconate dehydrogenase, NAD-binding
YP_001565447.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pna:Pnap_0602 transcriptional regulator, GntR family
YP_001565448.1	PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_5897 major facilitator superfamily MFS_1
YP_001565449.1	catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis
YP_001565450.1	PFAM: oxidoreductase domain protein; dihydrodipicolinate reductase; Oxidoreductase domain; homoserine dehydrogenase NAD-binding; KEGG: pol:Bpro_4498 oxidoreductase-like
YP_001565451.1	PFAM: porin Gram-negative type; KEGG: bxe:Bxe_C0935 outer membrane porin, OmpC family
YP_001565452.1	PFAM: UBA/THIF-type NAD/FAD binding protein; Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; KEGG: reu:Reut_B5029 shikimate 5-dehydrogenase
YP_001565453.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bja:bll5462 hypothetical metabolite transport protein
YP_001565454.1	PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: pol:Bpro_1846 transcriptional regulator, IclR family
YP_001565455.1	KEGG: spe:Spro_2447 putative RNase H
YP_001565456.1	PFAM: aldo/keto reductase; KEGG: rfr:Rfer_0302 aldo/keto reductase
YP_001565457.1	PFAM: Xylose isomerase domain protein TIM barrel; KEGG: pna:Pnap_1656 xylose isomerase domain protein TIM barrel
YP_001565458.1	KEGG: pol:Bpro_1853 4-hydroxyphenylpyruvate dioxygenase
YP_001565459.1	PFAM: Semialdehyde dehydrogenase NAD - binding; oxidoreductase domain protein; Oxidoreductase domain; KEGG: bra:BRADO2343 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase
YP_001565460.1	extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols; part of the bacterial aromatic compound degradation pathway
YP_001565461.1	extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols; part of the bacterial aromatic compound degradation pathway
YP_001565462.1	PFAM: amidohydrolase 2; KEGG: azo:azo2539 probable 2-pyrone-4,6-dicarboxylate hydrolase
YP_001565463.1	TIGRFAM: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase; PFAM: Dimethylmenaquinone methyltransferase; KEGG: pol:Bpro_4321 dimethylmenaquinone methyltransferase
YP_001565464.1	PFAM: amidohydrolase 2; KEGG: pna:Pnap_2032 amidohydrolase 2
YP_001565465.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: azo:azo2543 putative 4-hydroxybenzoate transporter protein
YP_001565466.1	PFAM: protein of unknown function DUF453; KEGG: pna:Pnap_2033 protein of unknown function DUF453
YP_001565467.1	KEGG: ajs:Ajs_1927 hypothetical protein
YP_001565468.1	PFAM: conserved hypothetical protein; KEGG: reu:Reut_B3798 hypothetical protein
YP_001565469.1	PFAM: amidohydrolase 2; KEGG: rso:RS05190 probable hydrolase transmembrane protein
YP_001565470.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B1617 transcriptional regulator, LysR family
YP_001565471.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: aha:AHA_1994 glucose 1-dehydrogenase
YP_001565472.1	KEGG: aav:Aave_0497 rhs element Vgr protein
YP_001565473.1	PFAM: ferric-uptake regulator; KEGG: vei:Veis_3389 ferric uptake regulator, Fur family
YP_001565474.1	KEGG: ccr:CC_1520 hypothetical protein
YP_001565475.1	KEGG: xom:XOO_0574 hypothetical protein
YP_001565476.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ccr:CC_1518 ABC transporter, ATP-binding protein
YP_001565477.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: aav:Aave_4000 TonB-dependent siderophore receptor
YP_001565479.1	PFAM: regulatory protein TetR; KEGG: bbr:BB0627 hypothetical protein
YP_001565480.1	PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: aav:Aave_2580 histone family protein nucleoid-structuring protein H-NS
YP_001565481.1	PFAM: Endoribonuclease L-PSP; KEGG: bbr:BB4411 hypothetical protein
YP_001565482.1	PFAM: thioesterase superfamily protein; KEGG: bbr:BB4412 probable 4-hydroxybenzoyl CoA thioesterase
YP_001565483.1	PFAM: AMP-dependent synthetase and ligase; KEGG: bbr:BB4413 probable acid-coenzyme A ligase
YP_001565484.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bbr:BB4414 putative acyl-CoA dehydrogenase
YP_001565485.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
YP_001565486.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bbr:BB4416 probable short chain dehydrogenase
YP_001565487.1	catalyzes the conversion of salicylyl-CoA to gentisyl-CoA
YP_001565488.1	KEGG: rso:RS01914 hypothetical protein
YP_001565489.1	KEGG: bur:Bcep18194_B2831 hypothetical protein
YP_001565490.1	KEGG: pol:Bpro_3606 hypothetical protein
YP_001565492.1	KEGG: aav:Aave_3790 transposase, IS4 family protein
YP_001565493.1	KEGG: aav:Aave_3789 putative TIS1421-transposase orfA protein
YP_001565495.1	KEGG: aav:Aave_4284 hypothetical protein
YP_001565496.1	TIGRFAM: YD repeat protein; PFAM: RHS protein; YD repeat-containing protein; KEGG: aav:Aave_4283 YD repeat protein
YP_001565497.1	TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; KEGG: aav:Aave_2735 rhs element Vgr protein
YP_001565498.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bpe:BP0305 high-affinity branched-chain amino acid transporter, ATP-binding protein
YP_001565499.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbr:BB4419 putative branched-chain amino acid transporter, ATP-binding protein
YP_001565500.1	PFAM: inner-membrane translocator; KEGG: bbr:BB4420 probable branched-chain amino acid transport system, permease component
YP_001565501.1	PFAM: inner-membrane translocator; KEGG: bbr:BB4421 probable branched-chain amino acid transport system, permease component
YP_001565502.1	PFAM: Extracellular ligand-binding receptor; KEGG: bbr:BB4422 putative ABC transporter substrate binding protein
YP_001565503.1	KEGG: bpe:BP0300 putative esterase
YP_001565504.1	PFAM: regulatory protein MarR; KEGG: bbr:BB4424 MarR-family transcriptional regulator
YP_001565505.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pfo:Pfl_2295 putative diguanylate cyclase (GGDEF domain)
YP_001565507.1	PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: aav:Aave_4245 DEAD/DEAH box helicase domain protein
YP_001565508.1	PFAM: Protein of unknown function DUF1800; KEGG: aav:Aave_4704 hypothetical protein
YP_001565509.1	PFAM: protein of unknown function DUF1501; KEGG: aav:Aave_4705 protein of unknown function DUF1501
YP_001565510.1	KEGG: bam:Bamb_6421 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein
YP_001565511.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: pfl:PFL_2354 hypothetical protein
YP_001565512.1	PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: pfl:PFL_2355 transcriptional regulator, MerR family
YP_001565513.1	KEGG: sal:Sala_3163 glyoxalase/bleomycin resistance protein/dioxygenase
YP_001565514.1	PFAM: glucose sorbosone dehydrogenase; KEGG: sus:Acid_1883 glucose sorbosone dehydrogenase
YP_001565515.1	KEGG: ajs:Ajs_4147 hypothetical protein
YP_001565516.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: rme:Rmet_5794 transcriptional regulator, GntR family
YP_001565517.1	TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; KEGG: pfl:PFL_2830 aspartate racemase
YP_001565518.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pfl:PFL_2831 transcriptional regulator, AraC family
YP_001565519.1	PFAM: EAL domain protein; GAF domain protein; KEGG: psa:PST_3107 EAL domain protein
YP_001565520.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: mbb:BCG_1717 putative acyl-CoA dehydrogenase fadE16
YP_001565521.1	KEGG: wsu:WS1830 hypothetical protein
YP_001565522.1	KEGG: hhe:HH1512 hypothetical protein
YP_001565524.1	KEGG: rso:RSc3419 hypothetical protein
YP_001565525.1	KEGG: rso:RSc3426 probable transmembrane protein
YP_001565527.1	KEGG: tfu:Tfu_1003 hypothetical protein
YP_001565528.1	KEGG: mba:Mbar_A3399 hypothetical protein; TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; SMART: Hedgehog/intein hint domain protein
YP_001565529.1	PFAM: coagulation factor 5/8 type domain protein; Fibronectin type III domain protein; APHP domain protein; KEGG: gur:Gura_0068 fibronectin, type III domain protein
YP_001565532.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ade:Adeh_2212 transcriptional regulator, LysR family
YP_001565533.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: tth:TTC0201 L-threonine 3-dehydrogenase
YP_001565534.1	KEGG: bpa:BPP0555 hypothetical protein
YP_001565535.1	PFAM: conserved hypothetical protein; KEGG: aav:Aave_3895 uncharacterized protein UPF0065
YP_001565536.1	PFAM: porin Gram-negative type; KEGG: bte:BTH_II0333 outer membrane porin, putative
YP_001565537.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: reh:H16_A3378 transcriptional regulator, AraC-family
YP_001565538.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: aav:Aave_4495 methyl-accepting chemotaxis sensory transducer
YP_001565539.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: aav:Aave_4512 short-chain dehydrogenase/reductase SDR
YP_001565540.1	PFAM: NMT1/THI5 like domain protein; KEGG: aav:Aave_4513 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein
YP_001565541.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_4514 binding-protein-dependent transport systems inner membrane component
YP_001565542.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_4515 ABC transporter-related protein
YP_001565543.1	PFAM: acyl-CoA reductase; KEGG: aav:Aave_4516 putative acyl-CoA reductase
YP_001565544.1	KEGG: aav:Aave_4517 putative acyl protein synthase/acyl-CoA reductase-like protein
YP_001565546.1	KEGG: aha:AHA_0552 transport protein
YP_001565547.1	PFAM: regulatory protein TetR; KEGG: asa:ASA_3759 transcriptional regulator, TetR family
YP_001565548.1	PFAM: peptidase S15; X-Pro dipeptidyl-peptidase domain protein; KEGG: nfa:nfa43000 putative esterase
YP_001565549.1	KEGG: tbd:Tbd_1197 hypothetical protein
YP_001565550.1	PFAM: regulatory protein MarR; KEGG: pna:Pnap_0603 transcriptional regulator, MarR family
YP_001565551.1	PFAM: amidohydrolase 2; KEGG: pna:Pnap_0606 amidohydrolase 2
YP_001565552.1	PFAM: Tannase and feruloyl esterase; KEGG: bam:Bamb_4911 feruloyl esterase
YP_001565553.1	PFAM: porin Gram-negative type; KEGG: pol:Bpro_3117 porin, gram-negative type
YP_001565554.1	PFAM: conserved hypothetical protein; KEGG: pna:Pnap_0604 uncharacterized protein UPF0065
YP_001565555.1	PFAM: protein of unknown function UPF0074; KEGG: pla:Plav_0970 transcriptional regulator, BadM/Rrf2 family
YP_001565556.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pau:PA14_09950 putative oxidoreductase
YP_001565558.1	PFAM: penicillin-binding protein transpeptidase; KEGG: bch:Bcen2424_3379 beta-lactamase
YP_001565559.1	activates fatty acids by binding to coenzyme A
YP_001565560.1	PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: pna:Pnap_2042 pyridoxamine 5'-phosphate oxidase-related, FMN-binding
YP_001565562.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN4781 transcriptional regulator, LysR family
YP_001565563.1	PFAM: isochorismatase hydrolase; KEGG: bte:BTH_II0283 isochorismatase family protein family
YP_001565564.1	KEGG: ajs:Ajs_2313 ATP-dependent helicase HrpA; TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase domain protein; helicase-associated domain protein; protein of unknown function DUF1605; SMART: AAA ATPase; DEAD-like helicases
YP_001565565.1	PFAM: metallophosphoesterase; KEGG: ajs:Ajs_2315 metallophosphoesterase
YP_001565566.1	KEGG: pol:Bpro_3874 putative hemagglutinin-related protein
YP_001565567.1	SMART: extracellular solute-binding protein family 3; KEGG: pol:Bpro_3873 extracellular solute-binding protein, family 3
YP_001565568.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pol:Bpro_3872 transcriptional regulator, GntR family
YP_001565569.1	catalyzes the conversion of citrate to isocitrate
YP_001565570.1	PFAM: conserved hypothetical protein; KEGG: pol:Bpro_3870 uncharacterized protein UPF0065
YP_001565571.1	PFAM: conserved hypothetical protein; KEGG: pol:Bpro_3869 uncharacterized protein UPF0065
YP_001565572.1	KEGG: bur:Bcep18194_A4864 metal-dependent phosphohydrolase
YP_001565573.1	KEGG: pfl:PFL_3007 homolog of eukaryotic DNA ligase III
YP_001565574.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pol:Bpro_0510 transcriptional regulator, LysR family
YP_001565575.1	PFAM: 4-oxalocrotonate tautomerase; KEGG: pol:Bpro_0509 4-oxalocrotonate tautomerase
YP_001565576.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_A2778 transcriptional regulator, LysR-family
YP_001565577.1	PFAM: conserved hypothetical protein; KEGG: pna:Pnap_0869 uncharacterized protein UPF0065
YP_001565578.1	PFAM: gamma-glutamyltranspeptidase; KEGG: pol:Bpro_3878 gamma-glutamyltransferase
YP_001565579.1	PFAM: conserved hypothetical protein; KEGG: bbr:BB2684 putative lipoprotein
YP_001565580.1	PFAM: amidohydrolase 2; KEGG: pfl:PFL_3557 transcriptional regulator, GntR family/amidohydrolase family protein
YP_001565581.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: vei:Veis_3262 transcriptional regulator, LysR family
YP_001565582.1	PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_2322 major facilitator superfamily MFS_1
YP_001565583.1	KEGG: prw:PsycPRwf_0651 ABC-2 type transporter
YP_001565584.1	PFAM: ABC-2 type transporter; KEGG: pcr:Pcryo_1038 hypothetical protein
YP_001565585.1	PFAM: secretion protein HlyD family protein; KEGG: eca:ECA0424 putative membrane protein
YP_001565586.1	PFAM: outer membrane efflux protein; KEGG: prw:PsycPRwf_0654 outer membrane efflux protein
YP_001565587.1	catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis
YP_001565588.1	PFAM: beta-lactamase; KEGG: ajs:Ajs_2328 beta-lactamase
YP_001565589.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_2551 transcriptional regulator, LysR family
YP_001565590.1	PFAM: glutaredoxin; Glutathione S-transferase domain; KEGG: ajs:Ajs_2333 glutaredoxin
YP_001565591.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pol:Bpro_2393 lysine exporter protein (LysE/YggA)
YP_001565592.1	PFAM: putative sugar-binding domain protein; KEGG: vei:Veis_2041 transcriptional regulator, DeoR family
YP_001565593.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bch:Bcen2424_4817 alcohol dehydrogenase GroES domain protein
YP_001565594.1	PFAM: inner-membrane translocator; KEGG: bpm:BURPS1710b_A1792 sugar ABC transporter, permease protein
YP_001565595.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: vei:Veis_2043 short-chain dehydrogenase/reductase SDR
YP_001565596.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: vei:Veis_2044 periplasmic binding protein/LacI transcriptional regulator
YP_001565597.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_2046 ABC transporter related
YP_001565598.1	KEGG: pol:Bpro_1460 sugar-phosphate isomerases, RpiB/LacA/LacB family; TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase
YP_001565599.1	in some organisms the DhaK and DhaL subunits are encoded by separate genes; in others they are fused; functions along with DhaM to phosphorylate dihydroxyacetone
YP_001565600.1	PFAM: Disulphide bond formation protein DsbB; KEGG: aav:Aave_2549 disulphide bond formation protein DsbB
YP_001565601.1	KEGG: ajs:Ajs_2335 sulfate ABC transporter, ATPase subunit; TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001565602.1	TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_2336 sulfate ABC transporter, inner membrane subunit CysW
YP_001565603.1	TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_2337 sulfate ABC transporter, inner membrane subunit CysT
YP_001565604.1	TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: ajs:Ajs_2338 sulfate ABC transporter, periplasmic sulfate-binding protein
YP_001565605.1	PFAM: protein of unknown function DUF1234; KEGG: aav:Aave_2544 protein of unknown function DUF1234
YP_001565606.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_2542 transcriptional regulator, LysR family
YP_001565607.1	PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: aav:Aave_2541 (acyl-carrier-protein) phosphodiesterase
YP_001565609.1	PFAM: NADPH-dependent FMN reductase; KEGG: aav:Aave_2540 NADPH-dependent FMN reductase
YP_001565610.1	PFAM: NLPA lipoprotein; KEGG: reh:H16_B2232 ABC-type transporter, periplasmic component: MUT family
YP_001565611.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cvi:CV_2296 probable transmembrane ABC transporter protein
YP_001565612.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cvi:CV_2295 probable ABC transporter system, ATP-binding protein
YP_001565613.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_2321 ABC transporter related
YP_001565614.1	PFAM: cobalt transport protein; KEGG: ajs:Ajs_2320 cobalt transport protein
YP_001565615.1	PFAM: BioY protein; KEGG: ajs:Ajs_2319 BioY protein
YP_001565616.1	PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_2318 AMP-dependent synthetase and ligase
YP_001565617.1	TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: ajs:Ajs_2317 acetyl-CoA acetyltransferases
YP_001565618.1	PFAM: nitroreductase; KEGG: ajs:Ajs_2316 nitroreductase
YP_001565619.1	TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: ajs:Ajs_2342 lipoprotein, YaeC family
YP_001565620.1	KEGG: pna:Pnap_4720 hypothetical protein
YP_001565621.1	PFAM: FAD linked oxidase domain protein; KEGG: bam:Bamb_6039 FAD linked oxidase domain protein
YP_001565622.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bch:Bcen2424_6151 transcriptional regulator, LysR family
YP_001565623.1	PFAM: regulatory protein MerR; KEGG: ajs:Ajs_2393 putative transcriptional regulator, MerR family
YP_001565624.1	This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control
YP_001565625.1	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily
YP_001565626.1	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily
YP_001565627.1	binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit
YP_001565628.1	PFAM: ribosomal protein L35; KEGG: aav:Aave_2857 ribosomal protein L35
YP_001565629.1	TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; KEGG: ajs:Ajs_2399 translation initiation factor IF-3
YP_001565630.1	catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr)
YP_001565631.1	TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: vei:Veis_3088 isocitrate lyase
YP_001565632.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: ajs:Ajs_2402 protein of unknown function DUF6, transmembrane
YP_001565633.1	PFAM: SWIB/MDM2 domain protein; KEGG: aav:Aave_2865 SWIB/MDM2 domain protein
YP_001565634.1	PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: vei:Veis_3083 FMN-dependent alpha-hydroxy acid dehydrogenase
YP_001565635.1	KEGG: aav:Aave_3310 BFD domain protein (2Fe-2S)-binding domain protein
YP_001565636.1	TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: aav:Aave_3311 TonB family protein
YP_001565637.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: ajs:Ajs_2407 MotA/TolQ/ExbB proton channel
YP_001565638.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: aav:Aave_3313 biopolymer transport protein ExbD/TolR
YP_001565639.1	KEGG: ajs:Ajs_2409 hypothetical protein
YP_001565640.1	PFAM: protein of unknown function DUF336; KEGG: ajs:Ajs_2410 protein of unknown function DUF336
YP_001565641.1	PFAM: protein of unknown function UPF0005; KEGG: aav:Aave_3316 protein of unknown function UPF0005
YP_001565642.1	KEGG: aav:Aave_3317 hypothetical protein
YP_001565643.1	in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]
YP_001565644.1	KEGG: aav:Aave_3319 hypothetical protein
YP_001565645.1	KEGG: aav:Aave_1942 transcriptional regulator-like protein
YP_001565646.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: aav:Aave_1940 NAD-dependent epimerase/dehydratase
YP_001565647.1	KEGG: pna:Pnap_1480 NAD-dependent epimerase/dehydratase
YP_001565648.1	KEGG: pna:Pnap_1479 integral membrane protein-like protein
YP_001565649.1	PFAM: TOBE domain protein; KEGG: aav:Aave_3040 TOBE domain protein
YP_001565650.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_3041 ABC transporter-related protein
YP_001565651.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_3042 binding-protein-dependent transport systems inner membrane component
YP_001565652.1	catalyzes the release of sulfite from alkanesulfonates
YP_001565653.1	KEGG: pna:Pnap_2419 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3
YP_001565654.1	KEGG: rfr:Rfer_1779 ABC transporter, substrate-binding protein, aliphatic sulphonates; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3
YP_001565655.1	TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: aav:Aave_3046 sulfate ABC transporter, periplasmic sulfate-binding protein
YP_001565656.1	PFAM: Fe(II) trafficking protein YggX; KEGG: rfr:Rfer_2102 Fe(II) trafficking protein YggX
YP_001565657.1	PFAM: protein of unknown function UPF0126; KEGG: ajs:Ajs_1797 protein of unknown function UPF0126
YP_001565658.1	TIGRFAM: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC; PFAM: FAD dependent oxidoreductase; protein of unknown function DUF752; KEGG: ajs:Ajs_1796 protein of unknown function DUF752
YP_001565659.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: azo:azo3836 probable TonB-dependent receptor
YP_001565660.1	KEGG: azo:azo3843 hypothetical protein
YP_001565661.1	KEGG: rru:Rru_A0135 molybdenum ABC transporter ATP-binding protein
YP_001565662.1	PFAM: periplasmic binding protein; KEGG: rpc:RPC_1985 periplasmic binding protein
YP_001565663.1	PFAM: transport system permease protein; ABC-3 protein; KEGG: pde:Pden_0865 transport system permease protein
YP_001565664.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rru:Rru_A3223 ABC transporter component
YP_001565665.1	KEGG: xcc:XCC0173 hypothetical protein
YP_001565666.1	PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: aav:Aave_3053 nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein
YP_001565667.1	PFAM: conserved hypothetical protein; KEGG: aav:Aave_3054 uncharacterized conserved protein UCP030820
YP_001565668.1	PFAM: phosphoadenosine phosphosulfate reductase; KEGG: vei:Veis_4333 phosphoadenylyl-sulfate reductase (thioredoxin)
YP_001565669.1	with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP
YP_001565670.1	KEGG: aav:Aave_3056 sulfate adenylyltransferase, large subunit; TIGRFAM: sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor GTP-binding
YP_001565671.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: vei:Veis_4317 4Fe-4S ferredoxin, iron-sulfur binding domain protein
YP_001565672.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ajs:Ajs_1789 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_001565673.1	KEGG: ajs:Ajs_1667 hypothetical protein
YP_001565674.1	catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine
YP_001565675.1	stimulates the activities of the other two initiation factors, IF-2 and IF-3
YP_001565676.1	KEGG: rle:RL4672 hypothetical protein
YP_001565677.1	KEGG: par:Psyc_0986 possible neutral zinc metallopeptidase
YP_001565678.1	KEGG: mca:MCA1887 hypothetical protein
YP_001565679.1	PFAM: protein of unknown function DUF159; KEGG: pol:Bpro_1950 protein of unknown function DUF159
YP_001565684.1	PFAM: glycoside hydrolase family 24; KEGG: aav:Aave_1729 putative endolysin (lysis protein) (lysozyme)
YP_001565686.1	KEGG: aav:Aave_2373 hypothetical protein
YP_001565687.1	KEGG: mmu:100041170 similar to loricrin
YP_001565688.1	KEGG: rsq:Rsph17025_2083 hypothetical protein
YP_001565689.1	KEGG: aav:Aave_1783 carbohydrate-binding family V/XII
YP_001565690.1	KEGG: aav:Aave_1782 prophage tail length tape measure
YP_001565691.1	KEGG: nar:Saro_0659 hypothetical protein
YP_001565693.1	KEGG: nar:Saro_0657 hypothetical protein
YP_001565695.1	KEGG: pna:Pnap_2251 hypothetical protein
YP_001565696.1	KEGG: pna:Pnap_2252 putative RecA/RadA recombinase
YP_001565697.1	PFAM: peptidase U35 phage prohead HK97; KEGG: oan:Oant_1504 peptidase U35 phage prohead HK97
YP_001565698.1	TIGRFAM: phage portal protein, lambda family; PFAM: portal protein lambda; KEGG: nwi:Nwi_0808 phage portal protein, lambda
YP_001565700.1	PFAM: Resolvase helix-turn-helix domain protein
YP_001565701.1	PFAM: terminase GpA; KEGG: ssn:SSON_2430 putative DNA packaging protein of prophage
YP_001565702.1	KEGG: atc:AGR_C_800 hypothetical protein
YP_001565703.1	PFAM: protein of unknown function DUF1376; KEGG: xft:PD1347 hypothetical protein
YP_001565705.1	KEGG: pna:Pnap_2259 hypothetical protein
YP_001565706.1	KEGG: pna:Pnap_2262 hypothetical protein
YP_001565716.1	KEGG: pau:PA14_58970 hypothetical protein
YP_001565718.1	PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: vei:Veis_3755 D12 class N6 adenine-specific DNA methyltransferase
YP_001565720.1	KEGG: aav:Aave_4521 hypothetical protein
YP_001565722.1	PFAM: integrase family protein; KEGG: bbr:BB1661 integrase
YP_001565723.1	KEGG: ypi:YpsIP31758_3075 putative lipoprotein
YP_001565724.1	PFAM: Glutathione S-transferase domain; KEGG: pfl:PFL_4586 glutathione S-transferase
YP_001565725.1	PFAM: ribonuclease H; KEGG: pol:Bpro_4830 ribonuclease H
YP_001565726.1	KEGG: bbr:BB2884 hypothetical protein
YP_001565727.1	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: ana:alr0276 hypothetical protein
YP_001565728.1	PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: aav:Aave_1150 histone family protein nucleoid-structuring protein H-NS
YP_001565730.1	TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pol:Bpro_1798 phosphoglycolate phosphatase
YP_001565731.1	Involved in ubiquinone biosynthesis
YP_001565732.1	PFAM: OmpA/MotB domain protein; KEGG: aav:Aave_3279 OmpA/MotB domain protein
YP_001565733.1	negatively supercoils closed circular double-stranded DNA
YP_001565734.1	catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine
YP_001565735.1	TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase; amino acid-binding ACT domain protein; KEGG: ajs:Ajs_2466 chorismate mutase
YP_001565736.1	PFAM: Prephenate dehydrogenase; NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; Ketopantoate reductase ApbA/PanE domain protein; KEGG: aav:Aave_3283 prephenate dehydrogenase
YP_001565737.1	catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; catalyzes CMP phosphorylation
YP_001565738.1	in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins
YP_001565739.1	TIGRFAM: integration host factor, beta subunit; PFAM: histone family protein DNA-binding protein; KEGG: aav:Aave_3286 histone family protein DNA-binding protein
YP_001565740.1	KEGG: aav:Aave_3287 hypothetical protein
YP_001565741.1	SMART: Tetratricopeptide domain protein; KEGG: vei:Veis_3911 tetratricopeptide TPR_4
YP_001565742.1	KEGG: pol:Bpro_1783 hypothetical protein
YP_001565743.1	subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+
YP_001565744.1	subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali
YP_001565745.1	subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone
YP_001565746.1	subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport
YP_001565747.1	PFAM: multiple resistance and pH regulation protein F; KEGG: vei:Veis_3905 multiple resistance and pH regulation protein F
YP_001565748.1	PFAM: Na+/H+ antiporter subunit; KEGG: ajs:Ajs_2479 Na+/H+ antiporter subunit
YP_001565749.1	PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_2487 conserved hypothetical protein 730
YP_001565750.1	PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_2488 major facilitator superfamily MFS_1
YP_001565751.1	PFAM: protein of unknown function DUF195; KEGG: ajs:Ajs_2489 protein of unknown function DUF195
YP_001565752.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: vei:Veis_2069 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
YP_001565753.1	KEGG: ajs:Ajs_2491 putative transmembrane protein
YP_001565754.1	catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate
YP_001565755.1	PFAM: thioesterase superfamily protein; KEGG: rfr:Rfer_2141 thioesterase superfamily
YP_001565756.1	TIGRFAM: phasin family protein; PFAM: Phasin family protein; KEGG: vei:Veis_2554 phasin family protein
YP_001565757.1	PFAM: extracellular solute-binding protein family 1; KEGG: ajs:Ajs_1607 extracellular solute-binding protein, family 1
YP_001565758.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ajs:Ajs_1606 short-chain dehydrogenase/reductase SDR
YP_001565759.1	KEGG: bmn:BMA10247_0877 hypothetical protein
YP_001565760.1	KEGG: aav:Aave_3724 cyclic peptide transporter; TIGRFAM: cyclic peptide transporter; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001565761.1	PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: nmu:Nmul_A1827 lipolytic enzyme
YP_001565762.1	KEGG: nmu:Nmul_A1824 hypothetical protein
YP_001565763.1	KEGG: nmu:Nmul_A1825 L-lysine 6-monooxygenase (NADPH)
YP_001565764.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: pen:PSEEN4328 RNA polymerase sigma-70 factor, ECF subfamily
YP_001565765.1	PFAM: FecR protein; KEGG: pen:PSEEN1038 FecR-like transmembrane sensor
YP_001565766.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: mms:mma_2028 ferric siderophore receptor
YP_001565767.1	TIGRFAM: non-ribosomal peptide synthase; amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; phosphopantetheine-binding; KEGG: bbt:BBta_6813 arthrofactin synthetase/syringopeptin synthetase C-related non-ribosomal peptide synthetase
YP_001565768.1	TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: bpl:BURPS1106A_A2212 non-ribosomal peptide synthase
YP_001565769.1	PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase ; Acyl transferase; KEGG: aav:Aave_3732 beta-ketoacyl synthase
YP_001565770.1	TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: aav:Aave_3733 amino acid adenylation domain
YP_001565771.1	PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: aav:Aave_3734 taurine catabolism dioxygenase TauD/TfdA
YP_001565772.1	PFAM: 4'-phosphopantetheinyl transferase; KEGG: nmu:Nmul_A1833 4'-phosphopantetheinyl transferase
YP_001565773.1	PFAM: Thioesterase; KEGG: nmu:Nmul_A1834 thioesterase
YP_001565774.1	PFAM: MbtH domain protein; KEGG: aav:Aave_3736 MbtH domain protein
YP_001565775.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: aav:Aave_3737 RNA polymerase, sigma-24 subunit, ECF subfamily
YP_001565776.1	PFAM: nitrogen regulatory protein P-II; KEGG: dar:Daro_0297 nitrogen regulatory protein P-II
YP_001565777.1	TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: neu:NE0375 acriflavin resistance protein:heavy metal efflux pump CzcA
YP_001565778.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dar:Daro_0295 secretion protein HlyD
YP_001565779.1	PFAM: outer membrane efflux protein; KEGG: rso:RS00407 putative outer membrane cation efflux system protein
YP_001565781.1	Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation
YP_001565782.1	KEGG: ajs:Ajs_2735 O-succinylhomoserine sulfhydrylase; TIGRFAM: O-succinylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase
YP_001565783.1	Catalyzes first step of the de novo purine nucleotide biosynthetic pathway
YP_001565784.1	PFAM: Colicin V production protein; KEGG: aav:Aave_1862 colicin V production protein
YP_001565785.1	PFAM: Sporulation domain protein; KEGG: ajs:Ajs_2738 sporulation domain protein
YP_001565786.1	TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: ajs:Ajs_2739 FolC bifunctional protein
YP_001565787.1	PFAM: arsenate reductase and related; KEGG: ajs:Ajs_2740 arsenate reductase and related
YP_001565788.1	PFAM: 17 kDa surface antigen; KEGG: ajs:Ajs_2741 17 kDa surface antigen
YP_001565789.1	PFAM: protein of unknown function DUF1255; KEGG: rso:RSc2552 hypothetical protein
YP_001565790.1	catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis
YP_001565791.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: cvi:CV_2939 probable transcriptional regulator
YP_001565792.1	PFAM: beta-lactamase domain protein; KEGG: hch:HCH_01185 Zn-dependent hydrolase, including glyoxylases
YP_001565793.1	PFAM: SPW repeat; KEGG: pol:Bpro_2330 hypothetical protein
YP_001565794.1	KEGG: aav:Aave_1855 UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: FAD linked oxidase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase domain protein
YP_001565795.1	putative nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription
YP_001565796.1	KEGG: aav:Aave_1853 hypothetical protein
YP_001565797.1	KEGG: aav:Aave_1852 putative metal dependent phosphohydrolase
YP_001565798.1	KEGG: ajs:Ajs_4093 twin-arginine translocation pathway signal
YP_001565799.1	catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine
YP_001565800.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: acb:A1S_3339 putative ferric siderophore receptor protein
YP_001565801.1	PFAM: protein of unknown function DUF350; KEGG: ajs:Ajs_4097 protein of unknown function DUF350
YP_001565802.1	KEGG: aav:Aave_4739 putative transmembrane protein
YP_001565803.1	PFAM: protein of unknown function DUF205; KEGG: aav:Aave_1851 protein of unknown function DUF205
YP_001565804.1	TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: ajs:Ajs_2754 YbaK/EbsC protein
YP_001565805.1	KEGG: rpa:RPA0928 hypothetical protein
YP_001565806.1	PFAM: helix-turn-helix domain protein; KEGG: xau:Xaut_0314 putative transcriptional regulator, XRE family
YP_001565807.1	KEGG: rfr:Rfer_1530 hypothetical protein
YP_001565808.1	PFAM: aldo/keto reductase; KEGG: aav:Aave_1849 aldo/keto reductase
YP_001565809.1	KEGG: reu:Reut_B4501 4-hydroxyphenylpyruvate dioxygenase; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase
YP_001565810.1	PFAM: amino acid permease-associated region; KEGG: pau:PA14_53050 aromatic amino acid transport protein AroP2
YP_001565811.1	PFAM: regulatory protein TetR; KEGG: bch:Bcen2424_5654 transcriptional regulator, TetR family
YP_001565812.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bpa:BPP2057 LysR-family transcriptional regulator
YP_001565813.1	PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bbr:BB1451 probable ATP-binding component of ABC transporter
YP_001565814.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbr:BB1452 probable permease component of ABC transporter
YP_001565815.1	PFAM: extracellular solute-binding protein family 1; KEGG: bbr:BB1453 putative regulatory lipoprotein
YP_001565816.1	KEGG: pol:Bpro_1534 hypothetical protein
YP_001565817.1	KEGG: bbr:BB3159 hypothetical protein
YP_001565818.1	PFAM: alpha/beta hydrolase fold; KEGG: ajs:Ajs_2756 alpha/beta hydrolase fold
YP_001565819.1	PFAM: peptidase S45 penicillin amidase; KEGG: pol:Bpro_2452 penicillin amidase
YP_001565821.1	PFAM: fatty acid hydroxylase; KEGG: cvi:CV_2371 hypothetical protein
YP_001565822.1	PFAM: peptidase U61 LD-carboxypeptidase A; KEGG: ajs:Ajs_2281 muramoyltetrapeptide carboxypeptidase
YP_001565823.1	PFAM: alpha/beta hydrolase fold; CMP/dCMP deaminase zinc-binding; KEGG: aav:Aave_3082 CMP/dCMP deaminase, zinc-binding
YP_001565824.1	PFAM: Extracellular ligand-binding receptor; KEGG: aav:Aave_3084 extracellular ligand-binding receptor
YP_001565825.1	PFAM: peptidase U32; KEGG: ajs:Ajs_2285 peptidase U32
YP_001565826.1	KEGG: xcb:XC_1763 hypothetical protein
YP_001565827.1	TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: aav:Aave_3827 oxidoreductase alpha (molybdopterin) subunit
YP_001565828.1	PFAM: GCN5-related N-acetyltransferase; KEGG: azo:azo3709 hypothetical protein
YP_001565829.1	PFAM: regulatory protein LuxR; KEGG: rfr:Rfer_0996 ATP-dependent transcriptional regulator, MalT-like, LuxR family
YP_001565830.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rfr:Rfer_0998 short-chain dehydrogenase/reductase SDR
YP_001565831.1	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation
YP_001565832.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rfr:Rfer_1001 ABC transporter related
YP_001565833.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rfr:Rfer_1002 ABC transporter related
YP_001565834.1	PFAM: inner-membrane translocator; KEGG: rfr:Rfer_1003 inner-membrane translocator
YP_001565835.1	PFAM: inner-membrane translocator; KEGG: rfr:Rfer_1004 inner-membrane translocator
YP_001565836.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pla:Plav_3255 enoyl-CoA hydratase/isomerase
YP_001565837.1	KEGG: rfr:Rfer_1005 extracellular ligand-binding receptor
YP_001565838.1	PFAM: AMP-dependent synthetase and ligase; KEGG: rfr:Rfer_1006 AMP-dependent synthetase and ligase
YP_001565839.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rme:Rmet_5435 L-carnitine dehydratase/bile acid-inducible protein F
YP_001565840.1	PFAM: AMP-dependent synthetase and ligase; KEGG: rme:Rmet_5438 AMP-dependent synthetase and ligase
YP_001565841.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rfr:Rfer_0994 acyl-CoA dehydrogenase-like
YP_001565842.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: hne:HNE_0595 oxidoreductase, short chain dehydrogenase/reductase family protein
YP_001565843.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: reu:Reut_A3284 enoyl-CoA hydratase/isomerase
YP_001565844.1	PFAM: 3'-5' exonuclease; KEGG: rfr:Rfer_2827 3'-5' exonuclease
YP_001565845.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: reh:H16_A0406 hypothetical protein with GGDEF domain
YP_001565846.1	KEGG: ajs:Ajs_2286 O-acetylhomoserine/O-acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase
YP_001565848.1	PFAM: protein of unknown function DUF323; KEGG: aav:Aave_3090 protein of unknown function DUF323
YP_001565849.1	KEGG: aav:Aave_3091 putative uncharacterized conserved protein
YP_001565850.1	PFAM: OmpW family protein; OmpF family protein; KEGG: ajs:Ajs_2289 OmpW family protein
YP_001565851.1	PFAM: Glutathione S-transferase domain; KEGG: aav:Aave_0259 glutathione S-transferase, N-terminal domain
YP_001565852.1	TIGRFAM: addiction module toxin, RelE/StbE family; KEGG: rfr:Rfer_1750 hypothetical protein
YP_001565853.1	TIGRFAM: addiction module antitoxin, RelB/DinJ family; PFAM: RelB antitoxin
YP_001565855.1	PFAM: Tetratricopeptide TPR_2 repeat protein
YP_001565857.1	PFAM: protein of unknown function DUF808; KEGG: ajs:Ajs_2290 protein of unknown function DUF808
YP_001565858.1	PFAM: VWA containing CoxE family protein; SMART: von Willebrand factor type A; KEGG: pna:Pnap_3742 VWA containing CoxE family protein
YP_001565859.1	KEGG: pna:Pnap_3740 hypothetical protein
YP_001565860.1	PFAM: ATPase associated with various cellular activities AAA_5; KEGG: pna:Pnap_3739 ATPase associated with various cellular activities, AAA_5
YP_001565861.1	KEGG: pna:Pnap_3738 hypothetical protein
YP_001565862.1	PFAM: zinc finger SWIM domain protein; KEGG: pna:Pnap_3737 zinc finger, SWIM domain protein
YP_001565863.1	PFAM: Radical SAM domain protein; KEGG: aav:Aave_4594 radical SAM domain protein
YP_001565864.1	KEGG: aav:Aave_4595 uracil-DNA glycosylase superfamily
YP_001565865.1	catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis
YP_001565866.1	KEGG: ajs:Ajs_2293 methionine aminopeptidase, type I; TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24
YP_001565867.1	catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein
YP_001565868.1	TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: pfo:Pfl_1871 xanthine/uracil permease
YP_001565869.1	KEGG: pol:Bpro_2590 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase
YP_001565870.1	PFAM: protein of unknown function DUF454; KEGG: aav:Aave_3103 protein of unknown function DUF454
YP_001565871.1	KEGG: pna:Pnap_2819 hypothetical protein
YP_001565872.1	leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys
YP_001565873.1	Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate
YP_001565874.1	PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: ajs:Ajs_1776 regulatory proteins, IclR
YP_001565875.1	PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: aav:Aave_3107 peptidase S11, D-alanyl-D-alanine carboxypeptidase 1
YP_001565876.1	catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis
YP_001565877.1	KEGG: ajs:Ajs_1773 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain
YP_001565878.1	KEGG: ajs:Ajs_1772 CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase
YP_001565879.1	KEGG: aav:Aave_3110 ketol-acid reductoisomerase; TIGRFAM: ketol-acid reductoisomerase; PFAM: acetohydroxy acid isomeroreductase; CoA-binding domain protein; Acetohydroxy acid isomeroreductase catalytic domain protein
YP_001565880.1	with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit
YP_001565881.1	acetolactate synthase large subunit; catalyzes the formation of 2-acetolactate from pyruvate
YP_001565882.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: aav:Aave_3113 RNA polymerase, sigma-24 subunit, ECF subfamily
YP_001565883.1	KEGG: ajs:Ajs_1767 putative transmembrane protein
YP_001565884.1	KEGG: ajs:Ajs_1766 putative transmembrane protein
YP_001565885.1	PFAM: RDD domain containing protein; KEGG: ajs:Ajs_1765 RDD domain containing protein
YP_001565886.1	PFAM: diacylglycerol kinase; KEGG: pol:Bpro_2312 diacylglycerol kinase
YP_001565887.1	PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_1763 conserved hypothetical protein 730
YP_001565888.1	PFAM: nitrogen regulatory protein P-II; KEGG: ajs:Ajs_1762 nitrogen regulatory protein P-II
YP_001565889.1	KEGG: aav:Aave_3120 NAD+ synthetase; TIGRFAM: NAD+ synthetase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; NAD synthase
YP_001565890.1	PFAM: protein of unknown function DUF482; KEGG: vei:Veis_1736 protein of unknown function DUF482
YP_001565891.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: ajs:Ajs_0364 methyl-accepting chemotaxis sensory transducer
YP_001565892.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mpt:Mpe_A0750 methyl-accepting chemotaxis protein
YP_001565893.1	PFAM: Inorganic pyrophosphatase; KEGG: vei:Veis_3002 inorganic diphosphatase
YP_001565894.1	PFAM: protein of unknown function DUF962; KEGG: aav:Aave_2666 protein of unknown function DUF962
YP_001565895.1	PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: aav:Aave_2665 transcriptional regulator, Crp/Fnr family
YP_001565896.1	PFAM: Aldehyde Dehydrogenase_; KEGG: ajs:Ajs_1756 aldehyde dehydrogenase (NAD(+))
YP_001565897.1	KEGG: ajs:Ajs_1755 hypothetical protein
YP_001565898.1	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
YP_001565899.1	together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z
YP_001565900.1	TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: ajs:Ajs_1748 molybdopterin-guanine dinucleotide biosynthesis protein A
YP_001565901.1	TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: ajs:Ajs_1747 molybdenum cofactor synthesis domain
YP_001565902.1	PFAM: Thioredoxin domain; KEGG: ajs:Ajs_1746 thioredoxin domain
YP_001565903.1	PFAM: regulatory protein TetR; KEGG: bxe:Bxe_C1026 transcriptional regulator, TetR family
YP_001565904.1	PFAM: conserved hypothetical protein; KEGG: pol:Bpro_3683 twin-arginine translocation pathway signal
YP_001565905.1	PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: vha:VIBHAR_02787 hypothetical protein
YP_001565906.1	PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bam:Bamb_1075 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding
YP_001565907.1	PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bam:Bamb_1074 (2Fe-2S)-binding domain protein
YP_001565908.1	PFAM: porin Gram-negative type; KEGG: bur:Bcep18194_B0482 outer membrane protein (porin)
YP_001565909.1	An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids
YP_001565910.1	PFAM: Methyltransferase type 11; KEGG: vei:Veis_0592 methyltransferase type 11
YP_001565911.1	KEGG: vei:Veis_0591 hydroxyacylglutathione hydrolase; TIGRFAM: hydroxyacylglutathione hydrolase; PFAM: beta-lactamase domain protein
YP_001565912.1	PFAM: Peptidoglycan-binding LysM; Lytic transglycosylase catalytic; MLTD_N domain protein; KEGG: ajs:Ajs_1742 lytic transglycosylase, catalytic
YP_001565913.1	KEGG: rfr:Rfer_1460 twin-arginine translocation pathway signal
YP_001565914.1	KEGG: ajs:Ajs_2347 membrane protein-like protein
YP_001565915.1	involved in a recombinational process of DNA repair, independent of the recBC complex
YP_001565916.1	PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_2349 conserved hypothetical protein 103
YP_001565917.1	KEGG: ajs:Ajs_2350 DNA polymerase III, subunits gamma and tau; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase
YP_001565918.1	PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ajs:Ajs_2353 HI0933 family protein
YP_001565919.1	TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: aav:Aave_2639 thioredoxin
YP_001565920.1	An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes
YP_001565921.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bpd:BURPS668_A1776 coa transferase, CaiB/BaiF family
YP_001565922.1	PFAM: regulatory protein MerR; Citrate synthase; KEGG: bur:Bcep18194_B1148 citrate synthase
YP_001565923.1	PFAM: ribosomal protein L31; KEGG: ajs:Ajs_2363 ribosomal protein L31
YP_001565924.1	KEGG: aav:Aave_2634 putative inner membrane transmembrane protein
YP_001565925.1	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: aav:Aave_2633 MATE efflux family protein
YP_001565926.1	KEGG: aav:Aave_2632 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: phosphate regulon sensor kinase PhoR; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001565927.1	TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ajs:Ajs_2367 two component transcriptional regulator, winged helix family
YP_001565928.1	TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: aav:Aave_2630 phosphate uptake regulator, PhoU
YP_001565929.1	KEGG: ajs:Ajs_2369 phosphate ABC transporter, ATPase subunit; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001565930.1	Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions
YP_001565931.1	TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_2627 phosphate ABC transporter, inner membrane subunit PstC
YP_001565932.1	TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: ajs:Ajs_2372 phosphate ABC transporter, periplasmic phosphate-binding protein
YP_001565933.1	PFAM: Ppx/GppA phosphatase; KEGG: aav:Aave_2625 Ppx/GppA phosphatase
YP_001565934.1	catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate
YP_001565935.1	PFAM: Ppx/GppA phosphatase; KEGG: pna:Pnap_2209 Ppx/GppA phosphatase
YP_001565936.1	KEGG: aav:Aave_2620 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAC repeat-containing protein
YP_001565937.1	catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
YP_001565938.1	KEGG: ajs:Ajs_2382 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS
YP_001565939.1	KEGG: ajs:Ajs_2383 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; SMART: AAA ATPase
YP_001565940.1	PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: ajs:Ajs_2384 ribosomal RNA methyltransferase RrmJ/FtsJ
YP_001565941.1	PFAM: protein of unknown function UPF0044; KEGG: ajs:Ajs_2385 protein of unknown function UPF0044
YP_001565942.1	KEGG: vei:Veis_0214 hypothetical protein
YP_001565943.1	KEGG: ajs:Ajs_2388 hypothetical protein
YP_001565944.1	TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: ajs:Ajs_2389 transcription elongation factor GreA
YP_001565945.1	TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; protein of unknown function DUF201; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; KEGG: ajs:Ajs_2390 carbamoyl-phosphate synthase, large subunit
YP_001565946.1	TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl-phosphate synthase small chain; KEGG: aav:Aave_2610 carbamoyl-phosphate synthase, small subunit
YP_001565947.1	PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: aav:Aave_1838 tRNA/rRNA methyltransferase (SpoU)
YP_001565948.1	RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids
YP_001565949.1	catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM
YP_001565950.1	TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; KEGG: ajs:Ajs_2573 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase
YP_001565951.1	in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP
YP_001565952.1	adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis
YP_001565953.1	PFAM: outer membrane chaperone Skp (OmpH); KEGG: aav:Aave_1832 outer membrane chaperone Skp (OmpH)
YP_001565954.1	TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: ajs:Ajs_2577 surface antigen (D15)
YP_001565955.1	KEGG: ajs:Ajs_2578 putative membrane-associated zinc metalloprotease; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein
YP_001565956.1	catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate
YP_001565957.1	PFAM: phosphatidate cytidylyltransferase; KEGG: ajs:Ajs_2580 phosphatidate cytidylyltransferase
YP_001565958.1	KEGG: aav:Aave_1827 undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase
YP_001565959.1	Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs
YP_001565960.1	Catalyzes the phosphorylation of UMP to UDP
YP_001565961.1	EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu
YP_001565962.1	one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit
YP_001565963.1	PFAM: FAD dependent oxidoreductase; KEGG: ajs:Ajs_2587 D-amino-acid dehydrogenase
YP_001565964.1	TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: aav:Aave_1821 carbohydrate kinase, YjeF related protein
YP_001565965.1	KEGG: aav:Aave_2988 ribonuclease R; TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; Ribonuclease B OB region domain; SMART: Cold shock protein
YP_001565966.1	KEGG: aav:Aave_2989 hypothetical protein
YP_001565967.1	PFAM: protein of unknown function DUF748; KEGG: ajs:Ajs_1662 protein of unknown function DUF748
YP_001565968.1	PFAM: Lytic transglycosylase catalytic; KEGG: aav:Aave_2991 lytic transglycosylase, catalytic
YP_001565969.1	PFAM: Orn/Lys/Arg decarboxylase major region; glycine hydroxymethyltransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: aav:Aave_2992 glycine hydroxymethyltransferase
YP_001565970.1	PFAM: ATP-cone domain protein; KEGG: aav:Aave_2993 ATP-cone domain protein
YP_001565971.1	catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis
YP_001565972.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: psb:Psyr_2213 helix-turn-helix, AraC type
YP_001565973.1	PFAM: CBS domain containing protein; KEGG: ajs:Ajs_1657 putative transcriptional regulator, XRE family
YP_001565974.1	catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol
YP_001565975.1	PFAM: alpha/beta hydrolase fold; KEGG: ajs:Ajs_1655 alpha/beta hydrolase fold
YP_001565976.1	PFAM: Acetamidase/Formamidase; KEGG: mpt:Mpe_A3600 hypothetical protein
YP_001565977.1	PFAM: helix-turn-helix- domain containing protein AraC type; Acetamidase/Formamidase; KEGG: mpt:Mpe_A3599 transcriptional regulatory protein
YP_001565978.1	PFAM: alpha/beta hydrolase fold; KEGG: bch:Bcen2424_3718 alpha/beta hydrolase fold
YP_001565979.1	KEGG: reh:H16_A1311 predicted membrane protein
YP_001565980.1	PFAM: ribonuclease BN; KEGG: vei:Veis_3782 putative ribonuclease BN
YP_001565981.1	KEGG: ajs:Ajs_1199 membrane protein-like protein
YP_001565982.1	PFAM: FAD linked oxidase domain protein; KEGG: ajs:Ajs_1198 FAD linked oxidase domain protein
YP_001565983.1	KEGG: aav:Aave_1451 hypothetical protein
YP_001565984.1	PFAM: thymidylate synthase; KEGG: ajs:Ajs_1197 thymidylate synthase
YP_001565985.1	PFAM: dihydrofolate reductase region; KEGG: ajs:Ajs_1195 dihydrofolate reductase
YP_001565986.1	PFAM: metallophosphoesterase; KEGG: sma:SAV2323 putative serine/threonine protein phosphatase
YP_001565987.1	KEGG: bbr:BB3900 ferric alcaligin siderophore receptor
YP_001565988.1	KEGG: pfo:Pfl_3710 hypothetical protein
YP_001565989.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: vei:Veis_4743 major facilitator superfamily MFS_1
YP_001565990.1	PFAM: Hydantoinase/oxoprolinase; Hydantoinase B/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: pol:Bpro_1781 5-oxoprolinase (ATP-hydrolyzing)
YP_001565991.1	PFAM: protein of unknown function DUF1445; KEGG: bur:Bcep18194_B2576 hypothetical protein
YP_001565992.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B2577 transcriptional regulator, LysR family
YP_001565993.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_5073 transcriptional regulator, LysR family
YP_001565994.1	PFAM: conserved hypothetical protein; KEGG: pol:Bpro_2834 uncharacterized protein UPF0065
YP_001565995.1	catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate)
YP_001565996.1	PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: pol:Bpro_2836 mandelate racemase/muconate lactonizing enzyme
YP_001565997.1	PFAM: dihydrodipicolinate synthetase; KEGG: aav:Aave_2247 dihydrodipicolinate synthetase
YP_001565998.1	KEGG: sus:Acid_0146 hypothetical protein
YP_001565999.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pen:PSEEN0743 acetyltransferase, GNAT family
YP_001566001.1	PFAM: Tail Collar domain protein; KEGG: fjo:Fjoh_2683 phage tail collar domain protein
YP_001566002.1	PFAM: Tail Collar domain protein; KEGG: sus:Acid_0150 phage tail collar domain protein
YP_001566003.1	PFAM: Tail Collar domain protein; KEGG: mlo:mll4441 microcystin dependent protein MdpB
YP_001566004.1	PFAM: Ig domain protein group 1 domain protein; KEGG: sus:Acid_0554 beta-propeller repeat protein
YP_001566005.1	KEGG: reh:H16_B0479 hypothetical protein
YP_001566006.1	PFAM: conserved hypothetical protein; KEGG: reh:H16_B0480 probable extra-cytoplasmic solute receptor
YP_001566007.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_B0481 transcriptional regulator, LysR-family
YP_001566008.1	PFAM: cyclic nucleotide-binding; KEGG: aav:Aave_3075 transcriptional regulator, Crp/Fnr family
YP_001566009.1	Catalyzes the deamination of cytosine to uracil and ammonia
YP_001566010.1	PFAM: Fimbrial protein; KEGG: pap:PSPA7_4404 adhesin 20K
YP_001566011.1	TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: ajs:Ajs_1194 exodeoxyribonuclease III Xth
YP_001566012.1	KEGG: ajs:Ajs_1193 hypothetical protein
YP_001566013.1	KEGG: aav:Aave_1445 nitrogen metabolism transcriptional regulator, NtrC, fis family; TIGRFAM: nitrogen regulation protein NR(I); PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_001566014.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ajs:Ajs_1191 signal transduction histidine kinase, nitrogen specific, NtrB
YP_001566015.1	KEGG: ajs:Ajs_1190 conserved hypothetical signal peptide protein
YP_001566016.1	TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: aav:Aave_1442 glutamine synthetase, type I
YP_001566017.1	PFAM: molybdopterin binding domain; KEGG: aav:Aave_1441 molybdopterin binding domain
YP_001566018.1	KEGG: ajs:Ajs_1187 putative transmembrane protein
YP_001566019.1	PFAM: fatty acid hydroxylase; KEGG: aav:Aave_1439 hypothetical protein
YP_001566020.1	PFAM: polysaccharide deacetylase; KEGG: aav:Aave_1438 polysaccharide deacetylase
YP_001566021.1	TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: ajs:Ajs_1184 hypothetical protein
YP_001566022.1	PFAM: phosphoribosyltransferase; KEGG: aav:Aave_1435 phosphoribosyltransferase
YP_001566023.1	catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis
YP_001566024.1	PFAM: tRNA synthetase class II (G H P and S); KEGG: ajs:Ajs_1180 tRNA synthetase, class II (G, H, P and S)
YP_001566025.1	TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: ajs:Ajs_1178 HflC protein
YP_001566026.1	TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: ajs:Ajs_1177 HflK protein
YP_001566027.1	TIGRFAM: small GTP-binding protein; GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: aav:Aave_1430 GTP-binding protein
YP_001566028.1	TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; KEGG: aav:Aave_1429 RNA chaperone Hfq
YP_001566029.1	EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains
YP_001566030.1	TIGRFAM: outer membrane assembly lipoprotein YfgL; PFAM: Pyrrolo-quinoline quinone; KEGG: aav:Aave_1427 pyrrolo-quinoline quinone
YP_001566031.1	KEGG: aav:Aave_1426 hypothetical protein
YP_001566032.1	catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG
YP_001566033.1	catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis
YP_001566034.1	KEGG: pol:Bpro_2609 hypothetical protein
YP_001566035.1	KEGG: aav:Aave_1422 type IV pilus biogenesis/stability protein PilW; TIGRFAM: type IV pilus biogenesis/stability protein PilW; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein
YP_001566036.1	TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: aav:Aave_1421 radical SAM enzyme, Cfr family
YP_001566037.1	catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate
YP_001566038.1	PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: aav:Aave_1419 pseudouridine synthase
YP_001566039.1	TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: aav:Aave_1418 putative transcriptional regulator
YP_001566040.1	KEGG: ajs:Ajs_1163 pseudouridine synthase, RluA family; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase
YP_001566041.1	PFAM: Peptidoglycan-binding LysM; peptidase M23B; KEGG: aav:Aave_1416 peptidase M23B
YP_001566042.1	KEGG: aav:Aave_1415 protein-L-isoaspartate O-methyltransferase; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase
YP_001566043.1	catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate
YP_001566044.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: aav:Aave_1413 alcohol dehydrogenase, zinc-binding domain protein
YP_001566045.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: aav:Aave_1412 diguanylate cyclase
YP_001566046.1	KEGG: ajs:Ajs_1157 alkaline phosphatase
YP_001566047.1	PFAM: sodium/glutamate symporter; KEGG: ajs:Ajs_2284 sodium/glutamate symporter
YP_001566048.1	PFAM: phospholipase D/Transphosphatidylase; KEGG: reh:H16_B1107 phospholipase D
YP_001566049.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bam:Bamb_4134 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_001566050.1	KEGG: bte:BTH_I1972 hypothetical protein
YP_001566051.1	TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: aci:ACIAD1987 methionine aminopeptidase
YP_001566052.1	PFAM: small multidrug resistance protein; KEGG: aav:Aave_4701 small multidrug resistance protein
YP_001566053.1	PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_3136 AMP-dependent synthetase and ligase
YP_001566055.1	PFAM: band 7 protein; KEGG: aba:Acid345_1730 membrane protease
YP_001566056.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: dps:DP0750 two-component system response regulator (Pho family)
YP_001566057.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: psb:Psyr_1498 heavy metal sensor kinase
YP_001566058.1	KEGG: aav:Aave_1407 DNA primase; TIGRFAM: DNA primase; PFAM: zinc finger CHC2-family protein; TOPRIM domain protein; DNA primase catalytic core domain; SMART: Toprim sub domain protein
YP_001566059.1	TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 1.1 domain protein; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 non-essential domain protein; sigma-70 region 1.2; KEGG: ajs:Ajs_3138 RNA polymerase, sigma 70 subunit, RpoD family
YP_001566060.1	PFAM: adenylate cyclase; KEGG: abo:ABO_0867 hypothetical protein
YP_001566061.1	PFAM: GCN5-related N-acetyltransferase; KEGG: ppf:Pput_3213 GCN5-related N-acetyltransferase
YP_001566062.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: reh:H16_B0980 transcriptional regulator, MocR family
YP_001566063.1	TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III; KEGG: bbr:BB1807 4-aminobutyrate aminotransferase
YP_001566064.1	KEGG: reh:H16_B0982 succinate-semialdehyde dehydrogenase (NADP+); TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_
YP_001566065.1	TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE domain protein; KEGG: aav:Aave_1400 2-dehydropantoate 2-reductase
YP_001566066.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: psa:PST_1001 putative outer membrane receptor
YP_001566067.1	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; flavodoxin/nitric oxide synthase; KEGG: har:HEAR3398 oxidoreductase binding flavins likely to be involved in sulfur metabolism (CysJ: sulfite reductase alpha subunit)
YP_001566068.1	PFAM: ApbE family lipoprotein; KEGG: mpt:Mpe_A3727 thiamine biosynthesis protein
YP_001566069.1	KEGG: xcb:XC_1336 hypothetical protein
YP_001566070.1	KEGG: mpt:Mpe_A3729 hypothetical protein
YP_001566071.1	PFAM: PepSY-associated TM helix domain protein; KEGG: mpt:Mpe_A3730 hypothetical protein
YP_001566072.1	PFAM: conserved hypothetical protein; KEGG: pna:Pnap_1237 uncharacterized protein UPF0065
YP_001566073.1	KEGG: ajs:Ajs_3145 putative transcriptional regulator
YP_001566074.1	PFAM: peptidylprolyl isomerase FKBP-type; KEGG: ajs:Ajs_3146 peptidylprolyl isomerase
YP_001566075.1	KEGG: vei:Veis_2053 hypothetical protein
YP_001566076.1	PFAM: Na+/solute symporter; KEGG: ajs:Ajs_2877 Na+/solute symporter
YP_001566077.1	KEGG: aav:Aave_1383 hypothetical protein
YP_001566078.1	catalyzes the formation of phosphoenolpyruvate from pyruvate
YP_001566079.1	PFAM: protein of unknown function DUF299; KEGG: ajs:Ajs_2880 protein of unknown function DUF299
YP_001566080.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: smd:Smed_0600 transcriptional regulator, LysR family
YP_001566081.1	KEGG: pen:PSEEN1394 hypothetical protein
YP_001566082.1	PFAM: Haemin-degrading family protein; KEGG: mfa:Mfla_1604 haemin-degrading
YP_001566083.1	KEGG: aav:Aave_1378 hypothetical protein
YP_001566084.1	TIGRFAM: TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; TonB-dependent heme/hemoglobin receptor family protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccr:CC_2194 TonB-dependent receptor
YP_001566085.1	TIGRFAM: alkyl hydroperoxide reductase, F subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ajs:Ajs_2881 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_001566086.1	with AhpF catalyzes the conversion of alkyl hydroperoxides to their corresponding alcohols; AhpC reduced the hydroperoxide substrate
YP_001566087.1	TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein; KEGG: pol:Bpro_3046 bacterioferritin
YP_001566088.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: noc:Noc_1167 signal transduction histidine kinase
YP_001566089.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bxe:Bxe_A0567 transcriptional regulator, GntR family
YP_001566090.1	PFAM: major facilitator superfamily MFS_1; KEGG: reu:Reut_B4536 general substrate transporter:major facilitator superfamily MFS_1
YP_001566091.1	PFAM: Ureidoglycolate hydrolase; KEGG: csa:Csal_0080 ureidoglycolate hydrolase
YP_001566092.1	PFAM: protein of unknown function DUF403; KEGG: aav:Aave_1354 protein of unknown function DUF403
YP_001566093.1	PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: aav:Aave_1353 protein of unknown function DUF404
YP_001566094.1	TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; PFAM: beta-lactamase domain protein; ComEC/Rec2-related protein; KEGG: vei:Veis_0403 DNA internalization-related competence protein ComEC/Rec2
YP_001566095.1	PFAM: Endoribonuclease L-PSP; KEGG: ajs:Ajs_1018 endoribonuclease L-PSP
YP_001566096.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: ajs:Ajs_1017 methyl-accepting chemotaxis sensory transducer
YP_001566097.1	decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling
YP_001566098.1	PFAM: Lytic transglycosylase catalytic; Transglycosylase domain protein; KEGG: aav:Aave_1341 lytic transglycosylase, catalytic
YP_001566099.1	decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling
YP_001566100.1	PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_1013 major facilitator superfamily MFS_1
YP_001566102.1	PFAM: Methyltransferase type 11; KEGG: aav:Aave_1338 methyltransferase type 11
YP_001566103.1	catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis
YP_001566104.1	PFAM: NlpBDapX family lipoprotein; KEGG: ajs:Ajs_1009 NlpBDapX family lipoprotein
YP_001566105.1	KEGG: ajs:Ajs_1007 hypothetical protein
YP_001566106.1	PFAM: Cupin 4 family protein; SMART: transcription factor jumonji jmjC domain protein; KEGG: aav:Aave_1332 cupin 4 family protein
YP_001566107.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pna:Pnap_3834 helix-turn-helix-domain containing protein, AraC type
YP_001566108.1	PFAM: Aldehyde Dehydrogenase_; KEGG: net:Neut_2587 aldehyde dehydrogenase
YP_001566109.1	KEGG: ajs:Ajs_1004 fkbp-type peptidyl-prolyl cis-trans isomerase
YP_001566110.1	PFAM: 17 kDa surface antigen; KEGG: pna:Pnap_1189 17 kDa surface antigen
YP_001566111.1	KEGG: eba:ebA7151 hypothetical protein
YP_001566112.1	KEGG: ajs:Ajs_4084 membrane protein
YP_001566113.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ajs:Ajs_4083 two component transcriptional regulator, winged helix family
YP_001566114.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: ajs:Ajs_4082 integral membrane sensor signal transduction histidine kinase
YP_001566115.1	KEGG: pna:Pnap_0132 hypothetical protein
YP_001566116.1	KEGG: aav:Aave_1329 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase
YP_001566118.1	KEGG: ajs:Ajs_1001 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein
YP_001566119.1	CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer
YP_001566120.1	catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis
YP_001566121.1	PFAM: protein of unknown function DUF1330; KEGG: aav:Aave_1325 protein of unknown function DUF1330
YP_001566122.1	enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis
YP_001566123.1	PFAM: Septum formation initiator; KEGG: vei:Veis_2649 septum formation initiator
YP_001566125.1	PFAM: Hsp33 protein; KEGG: ajs:Ajs_0994 HSP33 protein
YP_001566126.1	PFAM: transferase hexapeptide repeat containing protein; KEGG: ajs:Ajs_0993 transferase hexapeptide protein
YP_001566127.1	PFAM: protein of unknown function DUF455; KEGG: aav:Aave_1317 protein of unknown function DUF455
YP_001566128.1	PFAM: EAL domain protein; Metal-dependent hydrolase HDOD; KEGG: aav:Aave_1316 diguanylate phosphodiesterase
YP_001566129.1	PFAM: EAL domain protein; Metal-dependent hydrolase HDOD; KEGG: ajs:Ajs_0990 diguanylate phosphodiesterase
YP_001566130.1	PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0989 uncharacterized protein UPF0065
YP_001566131.1	TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: ajs:Ajs_0988 tyrosine recombinase XerD
YP_001566132.1	PFAM: conserved hypothetical protein; KEGG: aav:Aave_1312 uncharacterized protein UPF0065
YP_001566133.1	PFAM: Auxin Efflux Carrier; KEGG: aav:Aave_1308 auxin efflux carrier
YP_001566134.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A3439 transcriptional regulator, LysR family
YP_001566135.1	PFAM: Na+/solute symporter; KEGG: pfl:PFL_1573 sodium-solute symporter, putative
YP_001566136.1	TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: sme:SMc01967 putative agmatinase protein
YP_001566137.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mpt:Mpe_A3279 helix-turn-helix, AraC type
YP_001566138.1	KEGG: azo:azo0498 GGDEF/PAS/PAC-domain containing protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001566139.1	TIGRFAM: iron-sulfur cluster binding protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; domain of unknown function DUF1730; KEGG: ajs:Ajs_0985 putative iron-sulfur cluster binding protein
YP_001566140.1	PFAM: protein of unknown function UPF0079; KEGG: vei:Veis_1712 protein of unknown function UPF0079
YP_001566141.1	PFAM: cell wall hydrolase/autolysin; KEGG: aav:Aave_1305 N-acetylmuramoyl-L-alanine amidase
YP_001566142.1	PFAM: 17 kDa surface antigen; KEGG: ajs:Ajs_0979 17 kDa surface antigen
YP_001566143.1	PFAM: SNARE associated Golgi protein; KEGG: aav:Aave_1301 DedA protein (DSG-1 protein)
YP_001566144.1	PFAM: 17 kDa surface antigen; KEGG: ajs:Ajs_0979 17 kDa surface antigen
YP_001566145.1	TIGRFAM: DNA mismatch repair protein MutL; PFAM: ATP-binding region ATPase domain protein; DNA mismatch repair protein domain protein; MutL dimerisation; KEGG: aav:Aave_1300 DNA mismatch repair protein MutL
YP_001566146.1	PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_4060 uncharacterized protein UPF0065
YP_001566147.1	KEGG: bxe:Bxe_A2955 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein
YP_001566148.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A2956 transcriptional regulator, LysR family
YP_001566149.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: mpt:Mpe_A0867 hypothetical protein
YP_001566150.1	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: pna:Pnap_1299 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family
YP_001566151.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mpt:Mpe_A0869 RND multidrug efflux membrane fusion protein MexE precursor
YP_001566152.1	PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: aav:Aave_1361 alpha/beta hydrolase fold-3 domain protein
YP_001566153.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_1360 transcriptional regulator, LysR family
YP_001566154.1	converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer
YP_001566155.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: mpt:Mpe_B0326 conserved hypothetical ATP-dependent helicase
YP_001566156.1	KEGG: mpt:Mpe_B0327 hypothetical protein
YP_001566157.1	KEGG: psa:PST_3463 hypothetical protein
YP_001566158.1	KEGG: ajs:Ajs_4234 hypothetical protein
YP_001566159.1	PFAM: beta-lactamase; KEGG: reh:H16_B1574 beta-lactamase class C
YP_001566160.1	KEGG: ajs:Ajs_3300 hypothetical protein
YP_001566161.1	KEGG: aav:Aave_1297 hypothetical protein
YP_001566162.1	KEGG: dge:Dgeo_1940 hypothetical protein
YP_001566163.1	PFAM: Ankyrin; KEGG: bur:Bcep18194_B0772 hypothetical protein
YP_001566164.1	PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: mms:mma_0255 hypothetical protein
YP_001566165.1	PFAM: Rhodanese domain protein; KEGG: mms:mma_0256 thiosulfate sulfurtransferase
YP_001566166.1	TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rfr:Rfer_1536 drug resistance transporter Bcr/CflA subfamily
YP_001566167.1	KEGG: ajs:Ajs_3111 tRNA delta(2)-isopentenylpyrophosphate transferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase
YP_001566168.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_3112 ABC transporter related
YP_001566169.1	PFAM: protein of unknown function DUF214; KEGG: ajs:Ajs_3114 protein of unknown function DUF214
YP_001566170.1	PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: ajs:Ajs_3115 pyridoxal-5'-phosphate-dependent enzyme, beta subunit
YP_001566171.1	KEGG: ajs:Ajs_3116 secreted hydrolase-like protein
YP_001566172.1	TIGRFAM: addiction module antidote protein, CC2985 family; PFAM: protein of unknown function UPF0156; KEGG: mca:MCA2652 hypothetical protein
YP_001566173.1	PFAM: plasmid stabilization system; KEGG: mca:MCA2653 hypothetical protein
YP_001566174.1	PFAM: inner-membrane translocator; KEGG: aav:Aave_1285 inner-membrane translocator
YP_001566175.1	PFAM: inner-membrane translocator; KEGG: aav:Aave_1284 inner-membrane translocator
YP_001566176.1	KEGG: ajs:Ajs_3120 putative substrate-binding periplasmic (pbp) ABC transporter protein
YP_001566177.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_3121 ABC transporter related
YP_001566178.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_1280 ABC transporter-related protein
YP_001566179.1	PFAM: protein of unknown function DUF1178; KEGG: vei:Veis_4072 protein of unknown function DUF1178
YP_001566180.1	KEGG: ajs:Ajs_0971 putative transmembrane protein
YP_001566181.1	Catalyzes the transfer of electrons from NADH to quinone
YP_001566182.1	KEGG: ajs:Ajs_0969 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I)
YP_001566183.1	KEGG: ajs:Ajs_0968 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I)
YP_001566184.1	PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: aav:Aave_1273 NADH-ubiquinone oxidoreductase, chain 4L
YP_001566185.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: ajs:Ajs_0966 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
YP_001566186.1	Catalyzes the transfer of electrons from NADH to quinone
YP_001566187.1	PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: aav:Aave_1270 respiratory-chain NADH dehydrogenase, subunit 1
YP_001566188.1	Catalyzes the transfer of electrons from NADH to ubiquinone
YP_001566189.1	KEGG: ajs:Ajs_0962 NADH-quinone oxidoreductase, F subunit; TIGRFAM: NADH-quinone oxidoreductase, F subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit
YP_001566190.1	TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: aav:Aave_1267 NADH-quinone oxidoreductase, E subunit
YP_001566191.1	Catalyzes the transfer of electrons from NADH to quinone
YP_001566192.1	KEGG: ajs:Ajs_0959 NADH (or F420H2) dehydrogenase, subunit C; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit
YP_001566193.1	The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen
YP_001566194.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: aav:Aave_1263 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
YP_001566195.1	TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: aav:Aave_1262 preprotein translocase, SecG subunit
YP_001566196.1	Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate
YP_001566197.1	TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: aav:Aave_1260 alcohol dehydrogenase, zinc-binding domain protein
YP_001566198.1	KEGG: aav:Aave_1259 3' exoribonuclease; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH type 1 domain protein; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; SMART: KH domain protein
YP_001566199.1	primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence
YP_001566200.1	KEGG: vei:Veis_2820 hypothetical protein
YP_001566201.1	KEGG: ajs:Ajs_3182 putative type-4 fimbrial pilin related signal peptide protein
YP_001566202.1	TIGRFAM: type IV pilus modification protein PilV; KEGG: ajs:Ajs_3183 type IV pilus modification protein PilV
YP_001566203.1	KEGG: ajs:Ajs_3186 hypothetical protein
YP_001566204.1	KEGG: ajs:Ajs_3187 hypothetical protein
YP_001566205.1	PFAM: FG-GAP repeat protein; KEGG: ajs:Ajs_3188 type 4 fimbrial biogenesis protein PilY1
YP_001566206.1	KEGG: ajs:Ajs_3189 fimbrial protein pilin
YP_001566207.1	KEGG: ajs:Ajs_3181 N-terminal methylation site
YP_001566208.1	TIGRFAM: type IV pilus modification protein PilV; KEGG: ajs:Ajs_3183 type IV pilus modification protein PilV
YP_001566209.1	KEGG: ajs:Ajs_3186 hypothetical protein
YP_001566210.1	KEGG: ajs:Ajs_3187 hypothetical protein
YP_001566211.1	PFAM: FG-GAP repeat protein; KEGG: ajs:Ajs_3188 type 4 fimbrial biogenesis protein PilY1
YP_001566212.1	KEGG: ajs:Ajs_3189 fimbrial protein pilin
YP_001566213.1	KEGG: ajs:Ajs_3190 riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein
YP_001566214.1	PFAM: phospholipase D/Transphosphatidylase; KEGG: ajs:Ajs_3191 phospholipase D/transphosphatidylase
YP_001566215.1	PFAM: dihydrouridine synthase DuS; KEGG: aav:Aave_1255 dihydrouridine synthase, DuS
YP_001566216.1	KEGG: aav:Aave_1254 hypothetical protein
YP_001566217.1	PFAM: methyltransferase small; Methyltransferase type 11; KEGG: ajs:Ajs_3193 methyltransferase small
YP_001566218.1	PFAM: GCN5-related N-acetyltransferase; KEGG: ajs:Ajs_3194 GCN5-related N-acetyltransferase
YP_001566219.1	PFAM: Aldehyde Dehydrogenase_; KEGG: ajs:Ajs_3195 aldehyde dehydrogenase
YP_001566220.1	KEGG: aav:Aave_1250 hypothetical protein
YP_001566221.1	KEGG: ajs:Ajs_3198 ATPase AAA-2 domain protein; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase
YP_001566222.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: rso:RS05428 probable transcription regulator protein
YP_001566223.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: ppu:PP_4604 hypothetical protein
YP_001566224.1	PFAM: molybdopterin biosynthesis MoaE protein; KEGG: ajs:Ajs_3199 molybdopterin biosynthesis MoaE
YP_001566225.1	KEGG: aav:Aave_1246 hypothetical protein
YP_001566226.1	KEGG: ajs:Ajs_3201 hypothetical protein
YP_001566227.1	TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; KEGG: aav:Aave_1243 dihydrodipicolinate synthase
YP_001566228.1	KEGG: bbt:BBta_6747 putative resolvase (site-specific recombinase)
YP_001566229.1	TIGRFAM: molybdopterin converting factor, subunit 1; MoaD family protein; PFAM: thiamineS protein; KEGG: aav:Aave_1242 molybdopterin converting factor, subunit 1
YP_001566230.1	TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: ajs:Ajs_3203 molybdenum cofactor synthesis domain
YP_001566231.1	TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: ajs:Ajs_3204 molybdopterin-guanine dinucleotide biosynthesis protein B
YP_001566232.1	catalyzes the formation of L-threonine from O-phospho-L-homoserine
YP_001566233.1	catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine
YP_001566234.1	broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor
YP_001566235.1	PFAM: protein of unknown function DUF498; KEGG: aav:Aave_1236 protein of unknown function DUF498
YP_001566236.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: aav:Aave_1235 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
YP_001566237.1	PFAM: PhoH family protein; SMART: Nucleotide binding protein PINc; KEGG: ajs:Ajs_3210 PhoH family protein
YP_001566238.1	KEGG: aav:Aave_1233 hypothetical protein
YP_001566239.1	KEGG: ajs:Ajs_3212 replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase
YP_001566240.1	PFAM: ribosomal protein L9; KEGG: ajs:Ajs_3213 ribosomal protein L9
YP_001566241.1	binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit
YP_001566242.1	KEGG: ajs:Ajs_3215 putative primosomal replication protein
YP_001566243.1	binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21
YP_001566244.1	with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor
YP_001566245.1	heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria
YP_001566246.1	chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion
YP_001566247.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: hiq:CGSHiGG_00130 Sel1 domain protein repeat-containing protein
YP_001566248.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_3228 transcriptional regulator, LysR family
YP_001566249.1	dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate
YP_001566250.1	PFAM: Entericidin EcnAB; KEGG: ajs:Ajs_3230 entericidin EcnAB
YP_001566251.1	catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D
YP_001566252.1	catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis
YP_001566253.1	catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde
YP_001566254.1	KEGG: aav:Aave_1218 putative transmembrane protein
YP_001566255.1	mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability
YP_001566256.1	PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: aav:Aave_1216 phosphoribosylanthranilate isomerase
YP_001566257.1	catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate
YP_001566258.1	catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis
YP_001566259.1	TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; KEGG: aav:Aave_1213 acetyl-CoA carboxylase, carboxyl transferase, beta subunit
YP_001566260.1	PFAM: protein of unknown function YGGT; KEGG: aav:Aave_1212 protein of unknown function YGGT
YP_001566261.1	PFAM: peptidase S16 lon domain protein; KEGG: aav:Aave_1211 peptidase S16, lon domain protein
YP_001566262.1	class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1
YP_001566263.1	KEGG: rba:RB9964 hypothetical protein-transmembrane prediction
YP_001566264.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: ajs:Ajs_3251 response regulator receiver modulated diguanylate cyclase
YP_001566265.1	KEGG: aav:Aave_1202 small-conductance mechanosensitive channel-like protein
YP_001566266.1	non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis
YP_001566267.1	KEGG: pol:Bpro_3938 hypothetical protein
YP_001566268.1	PFAM: Cold-shock protein DNA-binding; protein of unknown function DUF1294; SMART: Cold shock protein; KEGG: neu:NE0717 cold-shock DNA-binding domain
YP_001566269.1	PFAM: phosphofructokinase; KEGG: ajs:Ajs_3260 6-phosphofructokinase
YP_001566270.1	PFAM: glycoside hydrolase family 3 domain protein; KEGG: ajs:Ajs_3261 beta-N-acetylhexosaminidase
YP_001566271.1	Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids
YP_001566272.1	involved in the de novo synthesis of pyridoxine (Vitamin B6)
YP_001566273.1	TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; KEGG: aav:Aave_1198 DNA repair protein RecO
YP_001566274.1	TIGRFAM: small GTP-binding protein; GTP-binding protein Era; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; Miro domain protein; KEGG: aav:Aave_1197 GTP-binding protein Era
YP_001566275.1	cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity
YP_001566276.1	KEGG: aav:Aave_1195 putative transmembrane protein
YP_001566277.1	KEGG: aav:Aave_1194 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein
YP_001566278.1	binds to the ribosome on the universally-conserved alpha-sarcin loop
YP_001566279.1	KEGG: aav:Aave_1192 protease Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein
YP_001566280.1	PFAM: Anti sigma-E protein RseA family protein; KEGG: ajs:Ajs_3273 anti sigma-E protein, RseA
YP_001566281.1	Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response
YP_001566282.1	TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase; KEGG: ajs:Ajs_3276 beta-ketoacyl synthase
YP_001566283.1	carries the fatty acid chain in fatty acid biosynthesis
YP_001566284.1	TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ajs:Ajs_3278 3-oxoacyl-(acyl-carrier-protein) reductase
YP_001566285.1	TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: ajs:Ajs_3279 malonyl CoA-acyl carrier protein transacylase
YP_001566286.1	FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs
YP_001566287.1	involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY
YP_001566288.1	some L32 proteins have zinc finger motifs consisting of CXXC while others do not
YP_001566289.1	PFAM: protein of unknown function DUF177; KEGG: ajs:Ajs_3283 protein of unknown function DUF177
YP_001566290.1	TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: ajs:Ajs_3284 maf protein
YP_001566291.1	KEGG: ajs:Ajs_3285 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase
YP_001566292.1	PFAM: peptidase S49; KEGG: aav:Aave_1177 peptidase S49
YP_001566293.1	PFAM: Rieske [2Fe-2S] domain protein; KEGG: aav:Aave_1176 Rieske (2Fe-2S) domain protein
YP_001566294.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ajs:Ajs_3288 HAD-superfamily hydrolase, subfamily IA, variant 1
YP_001566295.1	TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: aav:Aave_1174 pseudouridine synthase, RluA family
YP_001566296.1	TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: ajs:Ajs_3290 ribonuclease, Rne/Rng family
YP_001566297.1	PFAM: protein of unknown function DUF328; KEGG: ajs:Ajs_3291 protein of unknown function DUF328
YP_001566298.1	KEGG: aav:Aave_1171 2OG-Fe(II) oxygenase; PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit
YP_001566299.1	catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis
YP_001566300.1	TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold domain protein; KEGG: ajs:Ajs_3295 methyl-accepting chemotaxis sensory transducer
YP_001566301.1	PFAM: UMUC domain protein DNA-repair protein; KEGG: aav:Aave_1964 DNA-directed DNA polymerase
YP_001566302.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: ajs:Ajs_3297 hypothetical protein
YP_001566303.1	KEGG: pna:Pnap_1085 putative transmembrane protein
YP_001566304.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: pna:Pnap_1084 RNA polymerase, sigma-24 subunit, ECF subfamily
YP_001566305.1	KEGG: aav:Aave_1961 hypothetical protein
YP_001566306.1	SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pfl:PFL_4124 transcriptional regulator, AraC family
YP_001566307.1	PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: pfl:PFL_4123 2-isopropylmalate synthase
YP_001566308.1	PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: vei:Veis_3178 L-lactate dehydrogenase (cytochrome)
YP_001566309.1	TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: ajs:Ajs_4067 L-lactate transport
YP_001566310.1	PFAM: GCN5-related N-acetyltransferase; regulatory protein MarR; KEGG: kpn:KPN_01851 putative bacterial regulatory protein, MarR
YP_001566311.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: vei:Veis_4799 cupin 2, conserved barrel domain protein
YP_001566312.1	PFAM: conserved hypothetical protein; KEGG: vei:Veis_4798 uncharacterized protein UPF0065
YP_001566313.1	PFAM: regulatory protein TetR; KEGG: bxe:Bxe_C0212 transcriptional regulator, TetR family
YP_001566314.1	TIGRFAM: penicillin-binding protein 1C; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: ajs:Ajs_3299 penicillin-binding protein 1C
YP_001566315.1	KEGG: net:Neut_2430 hypothetical protein
YP_001566316.1	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: ajs:Ajs_3303 endonuclease/exonuclease/phosphatase
YP_001566317.1	KEGG: xcb:XC_0339 hypothetical protein
YP_001566318.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_3304 binding-protein-dependent transport systems inner membrane component
YP_001566319.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_3305 binding-protein-dependent transport systems inner membrane component
YP_001566320.1	PFAM: extracellular solute-binding protein family 1; KEGG: ajs:Ajs_3306 extracellular solute-binding protein, family 1
YP_001566321.1	PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ajs:Ajs_3307 ABC transporter related
YP_001566322.1	PFAM: Amidase; KEGG: bra:BRADO4407 putative amidase
YP_001566323.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: ppf:Pput_2723 helix-turn-helix-domain containing protein, AraC type
YP_001566324.1	TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: ajs:Ajs_3308 choline/carnitine/betaine transporter
YP_001566325.1	KEGG: azo:azo2571 hypothetical protein
YP_001566326.1	PFAM: alpha-2-macroglobulin domain protein; KEGG: aav:Aave_1953 alpha-2-macroglobulin domain protein
YP_001566327.1	KEGG: hch:HCH_02671 hypothetical protein
YP_001566328.1	PFAM: Rhomboid family protein; KEGG: xcv:XCV2885 putative rhomboid family membrane protein
YP_001566329.1	PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_3311 uncharacterized protein UPF0065
YP_001566330.1	catalyzes the formation of arginine from (N-L-arginino)succinate
YP_001566331.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase internal region; KEGG: vei:Veis_1353 histidine kinase internal region
YP_001566332.1	PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: aav:Aave_1947 response regulator receiver protein
YP_001566333.1	PFAM: aminotransferase class V; KEGG: aav:Aave_1124 aminotransferase, class V
YP_001566334.1	TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: aav:Aave_1123 putative endoribonuclease L-PSP
YP_001566335.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; Cache type 2 domain protein; KEGG: aav:Aave_1122 histidine kinase
YP_001566336.1	PFAM: regulatory protein LuxR; response regulator receiver; KEGG: aav:Aave_1121 two component transcriptional regulator, LuxR family
YP_001566337.1	PFAM: zinc/iron permease; KEGG: aav:Aave_1944 zinc/iron permease
YP_001566338.1	PFAM: dienelactone hydrolase; KEGG: ajs:Ajs_3316 carboxymethylenebutenolidase
YP_001566339.1	KEGG: aav:Aave_1930 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: Helix-hairpin-helix domain protein class 2
YP_001566340.1	KEGG: aav:Aave_1929 hypothetical protein
YP_001566341.1	catalyzes the formation of O-phospho-L-homoserine from L-homoserine
YP_001566342.1	KEGG: ajs:Ajs_3321 hypothetical protein
YP_001566343.1	KEGG: aav:Aave_1926 putative exported alkaline phosphatase
YP_001566344.1	KEGG: mms:mma_3481 hypothetical protein
YP_001566345.1	PFAM: UvrD/REP helicase; KEGG: aav:Aave_1916 UvrD/REP helicase
YP_001566346.1	TIGRFAM: guanosine monophosphate reductase; PFAM: IMP dehydrogenase/GMP reductase; KEGG: ajs:Ajs_3326 guanosine monophosphate reductase
YP_001566347.1	PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: reh:H16_A1508 TRAP-type transporter, periplasmic component
YP_001566348.1	TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: aav:Aave_1896 drug resistance transporter, Bcr/CflA subfamily
YP_001566349.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: aav:Aave_1895 diguanylate cyclase
YP_001566350.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: aav:Aave_1894 DEAD/DEAH box helicase domain protein
YP_001566351.1	PFAM: peptidase M48 Ste24p; KEGG: aav:Aave_1892 STE24 endopeptidase
YP_001566352.1	PFAM: transcriptional coactivator/pterin dehydratase; KEGG: ajs:Ajs_3348 transcriptional coactivator/pterin dehydratase
YP_001566353.1	TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; KEGG: ajs:Ajs_3349 ribosome small subunit-dependent GTPase A
YP_001566354.1	PFAM: cobalamin biosynthesis protein CbiB; KEGG: vei:Veis_0320 cobalamin biosynthesis protein CbiB
YP_001566355.1	PFAM: NUDIX hydrolase; KEGG: ajs:Ajs_3351 NUDIX hydrolase
YP_001566356.1	PFAM: ribosomal protein L19; KEGG: ajs:Ajs_3352 ribosomal protein L19
YP_001566357.1	methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA
YP_001566358.1	Essential for efficient processing of 16S rRNA
YP_001566359.1	PFAM: ribosomal protein S16; KEGG: ajs:Ajs_3355 ribosomal protein S16
YP_001566360.1	PFAM: GCN5-related N-acetyltransferase; KEGG: ajs:Ajs_3356 GCN5-related N-acetyltransferase
YP_001566361.1	KEGG: aav:Aave_1882 hypothetical protein
YP_001566362.1	PFAM: phosphate transporter; KEGG: ajs:Ajs_3358 phosphate transporter
YP_001566363.1	PFAM: protein of unknown function DUF47; KEGG: aav:Aave_1880 protein of unknown function DUF47
YP_001566364.1	PFAM: protein of unknown function DUF486; KEGG: ajs:Ajs_3360 protein of unknown function DUF486
YP_001566365.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_1878 ABC transporter-related protein
YP_001566366.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_1877 ABC transporter-related protein
YP_001566367.1	PFAM: inner-membrane translocator; KEGG: ajs:Ajs_3363 inner-membrane translocator
YP_001566368.1	PFAM: inner-membrane translocator; KEGG: aav:Aave_1875 inner-membrane translocator
YP_001566369.1	PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: bbr:BB2410 hypothetical protein
YP_001566370.1	PFAM: DSBA oxidoreductase; KEGG: reu:Reut_C6061 DsbA oxidoreductase
YP_001566371.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rme:Rmet_4197 short-chain dehydrogenase/reductase SDR
YP_001566372.1	PFAM: helix-turn-helix HxlR type; KEGG: bbt:BBta_5152 hypothetical protein
YP_001566373.1	PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: mms:mma_1156 hypothetical protein
YP_001566374.1	PFAM: branched-chain amino acid transport system II carrier protein; KEGG: pap:PSPA7_3684 branched-chain amino acid transport system II carrier protein
YP_001566375.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bur:Bcep18194_A4084 methyl-accepting chemotaxis sensory transducer
YP_001566376.1	PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: ajs:Ajs_3381 outer membrane lipoprotein carrier protein LolA
YP_001566377.1	PFAM: cell divisionFtsK/SpoIIIE; KEGG: ajs:Ajs_3382 cell divisionFtsK/SpoIIIE
YP_001566378.1	TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ajs:Ajs_3383 thioredoxin reductase
YP_001566379.1	required for 70S ribosome assembly
YP_001566380.1	in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif
YP_001566381.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: aav:Aave_3430 transcriptional regulator, GntR family
YP_001566383.1	PFAM: fatty acid desaturase; KEGG: ajs:Ajs_3386 fatty acid desaturase
YP_001566384.1	PFAM: Fmu (Sun) domain protein; KEGG: aav:Aave_3433 Fmu (Sun) domain protein
YP_001566385.1	PFAM: protein of unknown function DUF1653; KEGG: ajs:Ajs_3389 protein of unknown function DUF1653
YP_001566386.1	glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate
YP_001566387.1	PFAM: protein of unknown function DUF480; KEGG: aav:Aave_3438 protein of unknown function DUF480
YP_001566388.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: pna:Pnap_3224 acyl-CoA dehydrogenase domain protein
YP_001566389.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: aav:Aave_3440 acyl-CoA dehydrogenase domain protein
YP_001566390.1	PFAM: protein of unknown function UPF0187; KEGG: pna:Pnap_3226 protein of unknown function UPF0187
YP_001566391.1	KEGG: aav:Aave_4277 conserved repeat domain
YP_001566392.1	PFAM: response regulator receiver; KEGG: mfa:Mfla_2394 two component transcriptional regulator, winged helix family
YP_001566393.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Diverse 7TM receptor extracellular region 2; KEGG: kpn:KPN_02522 putative signal transduction histidine kinase
YP_001566394.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Diverse 7TM receptor extracellular region 2; KEGG: kpn:KPN_02522 putative signal transduction histidine kinase
YP_001566395.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; Methyltransferase type 11; Methyltransferase type 12; SMART: Tetratricopeptide domain protein; KEGG: aav:Aave_3443 methyltransferase type 12
YP_001566396.1	PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: vei:Veis_2107 HNH endonuclease
YP_001566397.1	catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities
YP_001566398.1	TIGRFAM: isoleucyl-tRNA synthetase; KEGG: ajs:Ajs_3399 isoleucyl-tRNA synthetase
YP_001566399.1	KEGG: ajs:Ajs_3400 lipoprotein signal peptidase; TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II
YP_001566400.1	TIGRFAM: Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; KEGG: aav:Aave_3461 Na/Pi-cotransporter II-related protein
YP_001566401.1	PFAM: NUDIX hydrolase; KEGG: aav:Aave_3467 NUDIX hydrolase
YP_001566402.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: aav:Aave_3468 alcohol dehydrogenase, zinc-binding domain protein
YP_001566403.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: aav:Aave_3469 protein of unknown function DUF6, transmembrane
YP_001566404.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; KEGG: aav:Aave_3487 diguanylate cyclase/phosphodiesterase
YP_001566405.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: aav:Aave_1080 short-chain dehydrogenase/reductase SDR
YP_001566406.1	KEGG: pol:Bpro_3879 hypothetical protein
YP_001566407.1	PFAM: protein of unknown function DUF112 transmembrane; KEGG: aav:Aave_1070 protein of unknown function DUF112, transmembrane
YP_001566408.1	PFAM: protein of unknown function DUF1468; KEGG: aav:Aave_1069 protein of unknown function DUF1468
YP_001566409.1	PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; KEGG: aav:Aave_1068 type II secretion system protein E
YP_001566410.1	KEGG: aav:Aave_1067 hypothetical protein
YP_001566411.1	KEGG: aav:Aave_1066 hypothetical protein
YP_001566412.1	PFAM: TatD-related deoxyribonuclease; KEGG: vei:Veis_4583 TatD-related deoxyribonuclease
YP_001566413.1	KEGG: xac:XAC1746 chemotaxis protein; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001566414.1	KEGG: ajs:Ajs_3420 lipoprotein releasing system, ATP-binding protein; TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001566415.1	TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: ajs:Ajs_3421 lipoprotein releasing system, transmembrane protein, LolC/E family
YP_001566416.1	PFAM: regulatory protein MarR; transcriptional regulator TrmB; KEGG: aav:Aave_4468 transcriptional regulator, TrmB
YP_001566417.1	PFAM: conserved hypothetical protein; KEGG: bbr:BB2467 hypothetical protein
YP_001566418.1	PFAM: sulfatase; KEGG: vei:Veis_2294 sulfatase
YP_001566419.1	KEGG: aav:Aave_3701 hypothetical protein
YP_001566420.1	TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: ajs:Ajs_3424 single-stranded-DNA-specific exonuclease RecJ
YP_001566421.1	PFAM: Curli production assembly/transport component CsgG; KEGG: eca:ECA4460 putative lipoprotein
YP_001566422.1	KEGG: ajs:Ajs_3428 hypothetical protein
YP_001566423.1	PFAM: protein of unknown function DUF799; KEGG: ajs:Ajs_3429 protein of unknown function DUF799
YP_001566424.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: ajs:Ajs_3430 methyl-accepting chemotaxis sensory transducer
YP_001566425.1	PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: ajs:Ajs_3431 PHP C-terminal domain protein
YP_001566426.1	TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; KEGG: aav:Aave_3708 SUA5/YciO/YrdC/YwlC family protein
YP_001566427.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: rme:Rmet_4185 methyl-accepting chemotaxis sensory transducer
YP_001566428.1	PFAM: peptidase M50; KEGG: aav:Aave_3710 peptidase M50
YP_001566429.1	catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_001566430.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: aav:Aave_4276 two component transcriptional regulator, winged helix family
YP_001566431.1	PFAM: Peptidoglycan-binding LysM; KEGG: mfa:Mfla_0431 peptidoglycan-binding LysM
YP_001566432.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; CHASE2 domain protein; KEGG: mms:mma_0215 two-component sensor histidine kinase
YP_001566433.1	Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
YP_001566434.1	catalyzes the phosphorylation of NAD to NADP
YP_001566435.1	TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: vei:Veis_1052 DNA repair protein RecN
YP_001566436.1	PFAM: conserved hypothetical protein; KEGG: vei:Veis_1053 uncharacterised P-loop ATPase protein UPF0042
YP_001566437.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pol:Bpro_0237 two component transcriptional regulator, winged helix family
YP_001566438.1	part of a two-component regulatory system with CreB or PhoB; involved in catabolic regulation
YP_001566439.1	PFAM: Inner membrane CreD family protein; KEGG: aav:Aave_0316 inner membrane CreD family protein
YP_001566441.1	KEGG: aav:Aave_3604 A/G-specific adenine glycosylase; TIGRFAM: A/G-specific adenine glycosylase; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; SMART: iron-sulfur cluster loop
YP_001566442.1	KEGG: ajs:Ajs_0900 hypothetical protein
YP_001566443.1	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases
YP_001566444.1	PFAM: Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: ajs:Ajs_0898 TPR repeat-containing protein
YP_001566445.1	PFAM: outer membrane lipoprotein LolB; KEGG: aav:Aave_3608 putative lipoprotein
YP_001566446.1	An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis
YP_001566447.1	KEGG: vei:Veis_0951 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase
YP_001566448.1	the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response
YP_001566449.1	Enables the recycling of peptidyl-tRNAs produced at termination of translation
YP_001566450.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: aav:Aave_3613 4Fe-4S ferredoxin, iron-sulfur binding domain protein
YP_001566451.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_3614 binding-protein-dependent transport systems inner membrane component
YP_001566452.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_3615 binding-protein-dependent transport systems inner membrane component
YP_001566453.1	KEGG: vei:Veis_0137 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_001566454.1	PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: ajs:Ajs_0888 ABC transporter related
YP_001566455.1	PFAM: extracellular solute-binding protein family 5; KEGG: ajs:Ajs_0887 extracellular solute-binding protein, family 5
YP_001566456.1	catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia
YP_001566457.1	PFAM: conserved hypothetical protein; KEGG: rme:Rmet_4501 twin-arginine translocation pathway signal
YP_001566458.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: reu:Reut_B3547 helix-turn-helix, AraC type
YP_001566459.1	KEGG: nmu:Nmul_A1494 esterase/lipase/thioesterase family active site
YP_001566460.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: ajs:Ajs_0885 lysine exporter protein (LysE/YggA)
YP_001566461.1	KEGG: rfr:Rfer_1303 hypothetical protein
YP_001566462.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: aav:Aave_3629 protein of unknown function DUF6, transmembrane
YP_001566463.1	PFAM: GTP cyclohydrolase I; KEGG: ajs:Ajs_0879 GTP cyclohydrolase I
YP_001566464.1	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: ajs:Ajs_0877 endonuclease/exonuclease/phosphatase
YP_001566465.1	PFAM: NUDIX hydrolase; KEGG: ajs:Ajs_0876 NUDIX hydrolase
YP_001566466.1	KEGG: aav:Aave_3636 hypothetical protein
YP_001566467.1	catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes
YP_001566468.1	PFAM: protein of unknown function DUF502; KEGG: aav:Aave_3638 protein of unknown function DUF502
YP_001566469.1	TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: aav:Aave_3639 putative regulatory protein, FmdB family
YP_001566470.1	KEGG: aau:AAur_0264 hypothetical protein
YP_001566471.1	PFAM: Na+/solute symporter; KEGG: ajs:Ajs_0871 Na+/solute symporter
YP_001566472.1	an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone; functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis; similar to eukaryotic proteins that exhibit kinase functions
YP_001566473.1	KEGG: aav:Aave_3642 hypothetical protein
YP_001566474.1	PFAM: import inner membrane translocase subunit Tim44; KEGG: ajs:Ajs_0868 import inner membrane translocase, subunit Tim44
YP_001566475.1	TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: ajs:Ajs_0867 ubiquinone/menaquinone biosynthesis methyltransferases
YP_001566476.1	PFAM: protein of unknown function DUF971; KEGG: aav:Aave_3645 protein of unknown function DUF971
YP_001566477.1	PFAM: histidine triad (HIT) protein; KEGG: ajs:Ajs_0865 histidine triad (HIT) protein
YP_001566478.1	PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; FAD linked oxidase domain protein; KEGG: aav:Aave_3648 FAD linked oxidase domain protein
YP_001566479.1	PFAM: extracellular solute-binding protein family 1; KEGG: aav:Aave_3650 extracellular solute-binding protein, family 1
YP_001566480.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_0856 binding-protein-dependent transport systems inner membrane component
YP_001566481.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_3652 binding-protein-dependent transport systems inner membrane component
YP_001566482.1	PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: aav:Aave_3653 ABC transporter-related protein
YP_001566483.1	PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: ajs:Ajs_0858 glycerophosphodiester phosphodiesterase
YP_001566484.1	PFAM: MscS Mechanosensitive ion channel; KEGG: aav:Aave_3656 MscS mechanosensitive ion channel
YP_001566485.1	PFAM: N-formylglutamate amidohydrolase; KEGG: ajs:Ajs_0856 N-formylglutamate amidohydrolase
YP_001566486.1	PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0855 uncharacterized protein UPF0065
YP_001566487.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_0854 transcriptional regulator, LysR family
YP_001566488.1	KEGG: rfr:Rfer_1282 hypothetical protein
YP_001566489.1	catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins
YP_001566490.1	recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2
YP_001566491.1	TIGRFAM: modification methylase, HemK family; protein-(glutamine-N5) methyltransferase, release factor-specific; PFAM: methyltransferase small; Methyltransferase type 12; KEGG: ajs:Ajs_0850 modification methylase, HemK family
YP_001566492.1	TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: ajs:Ajs_0849 glutaredoxin-like protein
YP_001566493.1	PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: aav:Aave_3668 protein of unknown function DUF21
YP_001566494.1	PFAM: Lytic transglycosylase catalytic; KEGG: ajs:Ajs_0847 lytic transglycosylase, catalytic
YP_001566495.1	catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro)
YP_001566496.1	hydrolyzes diadenosine polyphosphate
YP_001566497.1	catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis
YP_001566498.1	TIGRFAM: GTP-binding protein Obg/CgtA; PFAM: GTP-binding protein HSR1-related; GTP1/OBG sub domain protein; KEGG: ajs:Ajs_0843 GTP1/OBG sub domain protein
YP_001566499.1	involved in the peptidyltransferase reaction during translation
YP_001566500.1	PFAM: ribosomal protein L21; KEGG: ajs:Ajs_0841 ribosomal protein L21
YP_001566501.1	PFAM: Polyprenyl synthetase; KEGG: ajs:Ajs_0840 dimethylallyltranstransferase
YP_001566502.1	KEGG: aav:Aave_3680 type IV-A pilus assembly ATPase PilB; TIGRFAM: type IV-A pilus assembly ATPase PilB; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase
YP_001566503.1	PFAM: type II secretion system protein; KEGG: ajs:Ajs_0804 type II secretion system protein
YP_001566504.1	PFAM: peptidase A24A prepilin type IV; peptidase A24A domain protein; KEGG: aav:Aave_3682 prepilin peptidase
YP_001566505.1	KEGG: vei:Veis_3922 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase
YP_001566506.1	PFAM: protein of unknown function DUF1342; KEGG: ajs:Ajs_0801 protein of unknown function DUF1342
YP_001566507.1	PFAM: protein of unknown function DUF329; KEGG: ajs:Ajs_0800 protein of unknown function DUF329
YP_001566508.1	PFAM: NUDIX hydrolase; KEGG: aav:Aave_3686 NUDIX hydrolase
YP_001566509.1	PFAM: protein of unknown function DUF815; KEGG: ajs:Ajs_0798 protein of unknown function DUF815
YP_001566510.1	bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate
YP_001566511.1	functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins
YP_001566512.1	KEGG: aav:Aave_3691 hypothetical protein
YP_001566513.1	PFAM: Stringent starvation protein B; KEGG: aav:Aave_3692 stringent starvation protein B
YP_001566514.1	PFAM: Glutathione S-transferase domain; KEGG: aav:Aave_3693 glutathione S-transferase, N-terminal domain
YP_001566515.1	PFAM: cytochrome c1; KEGG: aav:Aave_3694 cytochrome c1
YP_001566516.1	PFAM: Cytochrome b/b6 domain; KEGG: aav:Aave_3695 cytochrome b/b6, N-terminal domain
YP_001566517.1	KEGG: aav:Aave_3696 ubiquinol-cytochrome c reductase, iron-sulfur subunit; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein
YP_001566518.1	homopentamer; channel that opens in response to pressure or hypoosmotic shock
YP_001566519.1	KEGG: ajs:Ajs_0787 4-hydroxythreonine-4-phosphate dehydrogenase; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA
YP_001566520.1	PFAM: protein of unknown function DUF34; KEGG: ajs:Ajs_0786 protein of unknown function DUF34
YP_001566521.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: aav:Aave_1058 major facilitator superfamily MFS_1
YP_001566523.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: xau:Xaut_3079 Sel1 domain protein repeat-containing protein
YP_001566524.1	TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; KEGG: hch:HCH_02779 rhs family protein
YP_001566525.1	KEGG: hch:HCH_02778 protein containing fibronectin type III domains
YP_001566526.1	KEGG: sus:Acid_6164 Ig family protein
YP_001566528.1	KEGG: hch:HCH_02780 RTX toxins and related Ca2+-binding protein
YP_001566529.1	PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: ajs:Ajs_0784 peptidase S1 and S6, chymotrypsin/Hap
YP_001566530.1	PFAM: Aldose 1-epimerase; KEGG: aav:Aave_1046 aldose 1-epimerase
YP_001566531.1	KEGG: aav:Aave_1035 hypothetical protein
YP_001566532.1	TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein; KEGG: ajs:Ajs_0765 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
YP_001566533.1	TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I; CobB/CobQ domain protein glutamine amidotransferase; KEGG: ajs:Ajs_0764 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
YP_001566534.1	PFAM: imidazoleglycerol-phosphate dehydratase; KEGG: aav:Aave_1032 imidazoleglycerol-phosphate dehydratase
YP_001566535.1	catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis
YP_001566536.1	KEGG: ajs:Ajs_0761 hypothetical protein
YP_001566537.1	KEGG: ajs:Ajs_0761 hypothetical protein
YP_001566538.1	catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer
YP_001566539.1	KEGG: pau:PA14_28990 hypothetical protein
YP_001566540.1	KEGG: aav:Aave_1023 ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase catalytic region
YP_001566541.1	TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); KEGG: aav:Aave_1022 UDP-N-acetylglucosamine 1-carboxyvinyltransferase
YP_001566542.1	PFAM: BolA family protein; KEGG: aav:Aave_1021 BolA family protein
YP_001566543.1	PFAM: ABC-2 type transporter; KEGG: aav:Aave_1020 ABC-2 type transporter
YP_001566544.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_1019 ABC transporter-related protein
YP_001566545.1	KEGG: vei:Veis_2402 sulfate transporter/antisigma-factor antagonist STAS
YP_001566546.1	PFAM: toluene tolerance family protein; KEGG: ajs:Ajs_0752 toluene tolerance family protein
YP_001566547.1	PFAM: VacJ family lipoprotein; KEGG: ajs:Ajs_0751 VacJ family lipoprotein
YP_001566548.1	PFAM: Mammalian cell entry related domain protein; KEGG: ajs:Ajs_0750 mammalian cell entry related domain protein
YP_001566549.1	PFAM: protein of unknown function DUF140; KEGG: aav:Aave_1014 protein of unknown function DUF140
YP_001566550.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_0748 ABC transporter related
YP_001566551.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_1012 ABC transporter-related protein
YP_001566552.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_0744 polar amino acid ABC transporter, inner membrane subunit
YP_001566553.1	PFAM: extracellular solute-binding protein family 3; KEGG: aav:Aave_1010 extracellular solute-binding protein, family 3
YP_001566554.1	KEGG: aav:Aave_1037 putative transmembrane protein
YP_001566555.1	PFAM: glycosyl transferase group 1; KEGG: aav:Aave_1038 glycosyl transferase, group 1
YP_001566556.1	KEGG: aav:Aave_1039 putative transmembrane protein
YP_001566557.1	KEGG: ajs:Ajs_0770 putative transmembrane protein
YP_001566558.1	KEGG: aav:Aave_1041 putative lipoprotein
YP_001566559.1	KEGG: ajs:Ajs_0772 tetratricopeptide TPR_2 repeat protein
YP_001566560.1	KEGG: aav:Aave_1043 putative signal peptide protein
YP_001566561.1	TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: aav:Aave_1044 UDP-glucose 4-epimerase
YP_001566562.1	catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase
YP_001566563.1	PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers
YP_001566564.1	catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis
YP_001566565.1	KEGG: ajs:Ajs_0778 putative transmembrane protein
YP_001566566.1	PFAM: Patatin; KEGG: ajs:Ajs_0779 patatin
YP_001566567.1	PFAM: histidine triad (HIT) protein; KEGG: vei:Veis_0702 histidine triad (HIT) protein
YP_001566568.1	TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes
YP_001566569.1	TIGRFAM: twin-arginine translocation protein, TatB subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: ajs:Ajs_0782 twin-arginine translocation protein, TatB subunit
YP_001566570.1	TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: ajs:Ajs_0783 sec-independent protein translocase, TatC subunit
YP_001566571.1	glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate
YP_001566572.1	PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: ajs:Ajs_0741 glutamate synthase (ferredoxin)
YP_001566573.1	PFAM: protein of unknown function DUF1568; KEGG: pol:Bpro_0790 protein of unknown function DUF1568
YP_001566574.1	TIGRFAM: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family; PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: ajs:Ajs_3551 beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family
YP_001566575.1	KEGG: ajs:Ajs_3550 3-oxoacid CoA-transferase, A subunit; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase
YP_001566576.1	KEGG: ajs:Ajs_3549 3-oxoacid CoA-transferase, B subunit; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase
YP_001566577.1	KEGG: ajs:Ajs_3548 beta-ketoadipyl CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferase; beta-ketoadipyl CoA thiolase; PFAM: Thiolase
YP_001566578.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pna:Pnap_0868 short-chain dehydrogenase/reductase SDR
YP_001566579.1	PFAM: conserved hypothetical protein; KEGG: pna:Pnap_0869 uncharacterized protein UPF0065
YP_001566580.1	KEGG: rso:RSc0099 putative signal peptide protein
YP_001566581.1	PFAM: Alkaline phosphatase; KEGG: rso:RSc0098 putative alkaline phosphatase signal peptide protein
YP_001566582.1	PFAM: Alkaline phosphatase; KEGG: rso:RSc0097 putative alkaline phosphatase lipoprotein transmembrane
YP_001566583.1	PFAM: beta-lactamase domain protein; KEGG: vei:Veis_2417 beta-lactamase domain protein
YP_001566585.1	KEGG: aav:Aave_1006 hypothetical protein
YP_001566586.1	PFAM: protein of unknown function DUF1415; KEGG: aav:Aave_1005 protein of unknown function DUF1415
YP_001566587.1	dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate
YP_001566588.1	catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis
YP_001566589.1	PFAM: shikimate kinase; KEGG: pna:Pnap_0678 shikimate kinase
YP_001566590.1	KEGG: aav:Aave_1001 Ig domain protein, group 1 domain protein
YP_001566591.1	TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB short domain; KEGG: aav:Aave_1000 type IV pilus secretin PilQ
YP_001566592.1	PFAM: Pilus assembly protein PilP; KEGG: aav:Aave_0999 pilus assembly protein, PilQ
YP_001566593.1	PFAM: Pilus assembly protein PilO; KEGG: aav:Aave_0998 pilus assembly protein, PilO
YP_001566594.1	PFAM: Fimbrial assembly family protein; KEGG: ajs:Ajs_0731 fimbrial assembly family protein
YP_001566595.1	TIGRFAM: type IV pilus assembly protein PilM; KEGG: aav:Aave_0996 type IV pilus assembly protein PilM
YP_001566596.1	KEGG: aav:Aave_0995 penicillin-binding protein, 1A family; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase
YP_001566597.1	TIGRFAM: iron donor protein CyaY; PFAM: Frataxin family protein; KEGG: aav:Aave_0994 frataxin family protein
YP_001566598.1	PFAM: beta-lactamase domain protein; KEGG: aav:Aave_0991 beta-lactamase domain protein
YP_001566599.1	PFAM: Ferric reductase domain protein transmembrane component domain; KEGG: pol:Bpro_0776 ferric reductase-like transmembrane component-like
YP_001566600.1	in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ
YP_001566601.1	TIGRFAM: cytochrome c-type biogenesis protein CcsB; PFAM: cytochrome c assembly protein; KEGG: aav:Aave_0986 cytochrome c assembly protein
YP_001566602.1	PFAM: ResB family protein; KEGG: aav:Aave_0985 ResB family protein
YP_001566603.1	PFAM: cytochrome c class I; KEGG: ajs:Ajs_0710 cytochrome c, class I
YP_001566604.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: vei:Veis_3165 helix-turn-helix-domain containing protein, AraC type
YP_001566605.1	PFAM: PfkB domain protein; KEGG: sil:SPOA0276 fructokinase
YP_001566606.1	PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: vei:Veis_3167 mannitol dehydrogenase, C-terminal domain
YP_001566607.1	PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: vei:Veis_3168 ABC transporter related
YP_001566608.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_3169 binding-protein-dependent transport systems inner membrane component
YP_001566609.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_3170 binding-protein-dependent transport systems inner membrane component
YP_001566610.1	PFAM: extracellular solute-binding protein family 1; KEGG: vei:Veis_3171 extracellular solute-binding protein, family 1
YP_001566611.1	PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: vei:Veis_2571 SMP-30/gluconolaconase/LRE domain protein
YP_001566612.1	functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family
YP_001566613.1	catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate
YP_001566614.1	binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential
YP_001566615.1	PFAM: alpha/beta hydrolase fold; KEGG: ajs:Ajs_0708 alpha/beta hydrolase fold
YP_001566616.1	PFAM: lipid A biosynthesis acyltransferase; KEGG: ajs:Ajs_0707 lipid A biosynthesis acyltransferase
YP_001566617.1	PFAM: lipid A biosynthesis acyltransferase; KEGG: ajs:Ajs_0706 lipid A biosynthesis acyltransferase
YP_001566618.1	catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase
YP_001566619.1	KEGG: ajs:Ajs_0702 hypothetical protein
YP_001566620.1	catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate
YP_001566621.1	KEGG: aav:Aave_0975 NAD+ synthetase; TIGRFAM: NAD+ synthetase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; NAD synthase
YP_001566622.1	TIGRFAM: cytidyltransferase-related domain protein; PFAM: NUDIX hydrolase; cytidylyltransferase; KEGG: ajs:Ajs_0701 cytidyltransferase-related domain
YP_001566623.1	PFAM: GCN5-related N-acetyltransferase; KEGG: ajs:Ajs_4148 GCN5-related N-acetyltransferase
YP_001566624.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_3039 transcriptional regulator, LysR family
YP_001566625.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: aav:Aave_3043 glyoxalase/bleomycin resistance protein/dioxygenase
YP_001566626.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: reh:H16_B1477 ABC-type transporter, permease component: MUT family
YP_001566627.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pmy:Pmen_2365 ABC transporter related
YP_001566628.1	PFAM: NLPA lipoprotein; KEGG: reh:H16_B1479 ABC-type transporter, periplasmic component: MUT family
YP_001566629.1	PFAM: 2OG-Fe(II) oxygenase; KEGG: asa:ASA_2346 2OG-Fe(II) oxygenase superfamily protein
YP_001566630.1	KEGG: pap:PSPA7_5762 homocysteine synthase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II
YP_001566631.1	KEGG: rme:Rmet_2219 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components
YP_001566632.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: reh:H16_B1867 ABC-type sulfonate transporter, permease component
YP_001566633.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rme:Rmet_2221 ABC transporter-related protein
YP_001566634.1	KEGG: reh:H16_B1869 cytochrome c, mono-and diheme variants
YP_001566635.1	PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: rle:RL2499 putative isoquinoline 1-oxidoreductase alpha subunit
YP_001566636.1	PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: pol:Bpro_3556 twin-arginine translocation pathway signal
YP_001566637.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RS05493 probable transcription regulator protein
YP_001566638.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: azo:azo0573 hypothetical protein
YP_001566639.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ppu:PP_3605 transcriptional regulator, LysR family
YP_001566640.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pau:PA14_29460 putative quinone oxidoreductase
YP_001566641.1	KEGG: vei:Veis_4644 porin, gram-negative type
YP_001566642.1	PFAM: conserved hypothetical protein; KEGG: reh:H16_B1445 probable extra-cytoplasmic solute receptor
YP_001566643.1	PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: mag:amb2306 putative GTPase
YP_001566645.1	PFAM: Hydantoinase B/oxoprolinase; KEGG: mta:Moth_1966 5-oxoprolinase (ATP-hydrolyzing)
YP_001566646.1	PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: mta:Moth_1967 5-oxoprolinase (ATP-hydrolyzing)
YP_001566647.1	PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bbt:BBta_5587 putative enzyme with isomerase/decarboxylase activity
YP_001566648.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bch:Bcen2424_3226 transcriptional regulator, LysR family
YP_001566649.1	PFAM: 6-phosphogluconate dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: rsh:Rsph17029_3087 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
YP_001566650.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: atc:AGR_pAT_700 probable ring-cleaving dioxygenase PA0817
YP_001566651.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: vha:VIBHAR_06369 hypothetical protein
YP_001566652.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_3530 transcriptional regulator, LysR family
YP_001566653.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bam:Bamb_3531 short-chain dehydrogenase/reductase SDR
YP_001566654.1	PFAM: Glutathione S-transferase domain; KEGG: rso:RSc2594 probable glutathione-S-transferase protein
YP_001566655.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: xau:Xaut_2927 transcriptional regulator, LysR family
YP_001566656.1	PFAM: ribulose bisphosphate carboxylase large chain; KEGG: ppf:Pput_1846 ribulose-bisphosphate carboxylase
YP_001566657.1	KEGG: ppf:Pput_1847 type III effector Hrp-dependent outer
YP_001566658.1	TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rpa:RPA2782 TrapT family, DctP subunit, C4-dicarboxylate periplasmic binding protein
YP_001566659.1	PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rpe:RPE_2875 TRAP C4-dicarboxylate transport system permease DctM subunit
YP_001566660.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ppf:Pput_1844 short-chain dehydrogenase/reductase SDR
YP_001566661.1	PFAM: protein of unknown function UPF0027; KEGG: bur:Bcep18194_B0923 hypothetical protein
YP_001566662.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pol:Bpro_4569 sigma54 specific transcriptional regulator with GAF sensor, fis family
YP_001566663.1	PFAM: Aldehyde Dehydrogenase_; KEGG: mpt:Mpe_A0599 aldehyde dehydrogenase (NAD+)
YP_001566664.1	PFAM: protein of unknown function DUF779; KEGG: mpt:Mpe_A0598 hypothetical protein
YP_001566665.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: nar:Saro_2315 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
YP_001566666.1	PFAM: acriflavin resistance protein; KEGG: pol:Bpro_3446 acriflavin resistance protein
YP_001566667.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rso:RSc3206 probable transport lipoprotein
YP_001566668.1	PFAM: regulatory protein TetR; KEGG: pol:Bpro_3444 transcriptional regulator, TetR family
YP_001566669.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: pol:Bpro_3443 RND efflux system, outer membrane lipoprotein, NodT
YP_001566670.1	KEGG: net:Neut_0047 hypothetical protein
YP_001566671.1	PFAM: protein of unknown function DUF1348; KEGG: bam:Bamb_5951 protein of unknown function DUF1348
YP_001566672.1	PFAM: regulatory protein TetR; KEGG: pol:Bpro_2654 transcriptional regulator, TetR family
YP_001566673.1	10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring
YP_001566674.1	60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth
YP_001566675.1	PFAM: aminotransferase class I and II; KEGG: bxe:Bxe_B2576 putative aminotransferase
YP_001566676.1	PFAM: protein of unknown function DUF1338; KEGG: rle:RL4587 hypothetical protein
YP_001566677.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ret:RHE_CH04052 probable transcriptional regulator protein, LysR family
YP_001566678.1	PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: vei:Veis_4296 cobalamin synthesis protein, P47K
YP_001566679.1	PFAM: Amidohydrolase 3; KEGG: vei:Veis_4295 amidohydrolase 3
YP_001566680.1	KEGG: vei:Veis_4294 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_001566681.1	KEGG: vei:Veis_4293 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_001566682.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_4292 binding-protein-dependent transport systems inner membrane component
YP_001566683.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_4291 binding-protein-dependent transport systems inner membrane component
YP_001566684.1	PFAM: extracellular solute-binding protein family 5; KEGG: vei:Veis_4290 extracellular solute-binding protein, family 5
YP_001566685.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: vei:Veis_4287 putative transcriptional regulator, GntR family
YP_001566686.1	PFAM: extracellular solute-binding protein family 3; KEGG: vei:Veis_0788 extracellular solute-binding protein, family 3
YP_001566687.1	functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family
YP_001566688.1	KEGG: ajs:Ajs_0696 transaldolase; TIGRFAM: transaldolase; PFAM: Transaldolase
YP_001566689.1	PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: ajs:Ajs_0694 transcriptional regulator, RpiR family
YP_001566690.1	TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase; KEGG: pfl:PFL_3434 3-oxoacyl-(acyl-carrier-protein) synthase II
YP_001566691.1	PFAM: regulatory protein TetR; KEGG: ajs:Ajs_2441 transcriptional regulator, TetR family
YP_001566692.1	KEGG: ajs:Ajs_0687 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein
YP_001566693.1	KEGG: aav:Aave_0933 porin, gram-negative type
YP_001566694.1	KEGG: aav:Aave_0933 porin, gram-negative type
YP_001566695.1	KEGG: ajs:Ajs_0682 porin, gram-negative type
YP_001566696.1	KEGG: ajs:Ajs_0681 putative ubiquinone biosynthesis protein
YP_001566697.1	PFAM: OsmC family protein; KEGG: aav:Aave_0930 OsmC family protein
YP_001566698.1	threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway
YP_001566699.1	PFAM: cobalamin-5-phosphate synthase CobS; KEGG: ajs:Ajs_0678 cobalamin-5-phosphate synthase CobS
YP_001566700.1	PFAM: Phosphoglycerate mutase; KEGG: aav:Aave_0927 phosphoglycerate mutase
YP_001566701.1	KEGG: aav:Aave_0926 hypothetical protein
YP_001566702.1	TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: aav:Aave_0925 general secretion pathway protein G
YP_001566703.1	TIGRFAM: general secretion pathway protein H; KEGG: vei:Veis_3522 general secretion pathway protein H
YP_001566704.1	PFAM: type II secretion system protein I/J; KEGG: vei:Veis_3523 general secretion pathway protein I
YP_001566705.1	KEGG: vei:Veis_3524 hypothetical protein
YP_001566706.1	PFAM: General secretion pathway protein K; KEGG: ajs:Ajs_0671 general secretion pathway protein K
YP_001566707.1	PFAM: General secretion pathway L; KEGG: aav:Aave_0920 hypothetical protein
YP_001566708.1	KEGG: ajs:Ajs_0669 hypothetical protein
YP_001566709.1	KEGG: vei:Veis_3528 putative general secretory pathway N transmembrane protein
YP_001566710.1	TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: aav:Aave_0917 general secretion pathway protein D
YP_001566711.1	KEGG: aav:Aave_0916 general secretory pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase
YP_001566713.1	PFAM: luciferase family protein; KEGG: ajs:Ajs_0664 luciferase family protein
YP_001566714.1	PFAM: Helix-turn-helix type 11 domain protein; KEGG: aav:Aave_2089 helix-turn-helix, type 11 domain protein
YP_001566715.1	PFAM: Glutathione S-transferase domain; KEGG: xac:XAC1299 glutathione S-transferase
YP_001566716.1	TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: ajs:Ajs_0663 general secretion pathway protein F
YP_001566717.1	PFAM: 5-nucleotidase; KEGG: ajs:Ajs_0662 5-nucleotidase
YP_001566718.1	PFAM: Calcium-binding EF-hand-containing protein; KEGG: aav:Aave_3976 putative signal transduction protein with EFhand domain
YP_001566719.1	KEGG: ajs:Ajs_0660 hypothetical protein
YP_001566720.1	PFAM: Domain of unknown function DUF1854; KEGG: aav:Aave_3978 hypothetical protein
YP_001566721.1	PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_3979 ABC transporter-related protein
YP_001566722.1	catalyze the formation of cyanophycin which may act to store excess nitrogen
YP_001566723.1	catalyze the formation of cyanophycin which may act to store excess nitrogen
YP_001566724.1	PFAM: CreA family protein; KEGG: pna:Pnap_2219 CreA family protein
YP_001566725.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_2818 transcriptional regulator, LysR family
YP_001566726.1	PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_2819 conserved hypothetical protein 698
YP_001566727.1	PFAM: regulatory protein MarR; KEGG: xau:Xaut_1307 transcriptional regulator, MarR family
YP_001566728.1	KEGG: xau:Xaut_1306 fusaric acid resistance protein conserved region
YP_001566729.1	KEGG: reh:H16_B2397 acetyltransferase
YP_001566730.1	PFAM: Aldehyde Dehydrogenase_; KEGG: bam:Bamb_3830 succinate-semialdehyde dehydrogenase (NAD(P)(+))
YP_001566731.1	PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: aav:Aave_4238 hypothetical protein
YP_001566732.1	KEGG: ajs:Ajs_3698 DnaK-related protein
YP_001566733.1	KEGG: ajs:Ajs_3696 putative heat-shock chaperone protein
YP_001566734.1	KEGG: ajs:Ajs_3695 hypothetical protein
YP_001566735.1	KEGG: mms:mma_1045 hypothetical protein
YP_001566736.1	catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine
YP_001566737.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper ion binding protein; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: bpe:BP2860 probable cation-transporting ATPase
YP_001566738.1	PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: aav:Aave_4022 5'-nucleotidase
YP_001566739.1	PFAM: biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: reu:Reut_A2451 biotin/lipoyl attachment:carbamoyl-phosphate synthase L chain, ATP-binding:carbamoyl-phosphate synthetase large chain, N-terminal:biotin carboxylase, C-terminal
YP_001566740.1	PFAM: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; KEGG: reh:H16_B1758 allophanate hydrolase
YP_001566741.1	PFAM: LamB/YcsF family protein; KEGG: rfr:Rfer_0870 LamB/YcsF
YP_001566742.1	KEGG: rfr:Rfer_0871 pyrrolidone-carboxylate peptidase; TIGRFAM: pyrrolidone-carboxylate peptidase; PFAM: peptidase C15 pyroglutamyl peptidase I
YP_001566743.1	PFAM: protein of unknown function DUF979; KEGG: rfr:Rfer_0872 protein of unknown function DUF979
YP_001566744.1	PFAM: protein of unknown function DUF969; KEGG: rfr:Rfer_0873 protein of unknown function DUF969
YP_001566745.1	PFAM: Extracellular ligand-binding receptor; KEGG: ajs:Ajs_0045 extracellular ligand-binding receptor
YP_001566746.1	PFAM: conserved hypothetical protein; KEGG: reh:H16_B1440 probable extra-cytoplasmic solute receptor
YP_001566747.1	PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: bja:bll4016 probable L-allo-threonine aldolase
YP_001566748.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: reh:H16_B1761 transcriptonal regulator, GntR-family
YP_001566749.1	PFAM: DoxX family protein; KEGG: pfl:PFL_2372 SURF4 domain protein
YP_001566750.1	KEGG: net:Neut_0038 hypothetical protein
YP_001566751.1	PFAM: ferredoxin; adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: smd:Smed_2364 putative adenylate/guanylate cyclase
YP_001566752.1	PFAM: cyclic nucleotide-binding; KEGG: neu:NE1296 cyclic nucleotide-binding domain:cAMP-dependent protein kinase
YP_001566753.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: reh:H16_A1931 ABC-type transporter, duplicated ATPase domains:drug RA1 family
YP_001566754.1	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: rso:RSp0312 probable multidrug efflux system transmembrane protein
YP_001566755.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rso:RS05454 probable two component response regulator transcription regulator protein
YP_001566756.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rru:Rru_A2930 periplasmic sensor signal transduction histidine kinase
YP_001566757.1	KEGG: bxe:Bxe_B1644 hypothetical protein
YP_001566758.1	KEGG: bvi:Bcep1808_1603 magnesium chelatase; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_001566759.1	KEGG: bvi:Bcep1808_1602 cobaltochelatase, CobN subunit; TIGRFAM: cobaltochelatase, CobN subunit; PFAM: CobN/magnesium chelatase
YP_001566760.1	TIGRFAM: cobalamin biosynthesis protein CobW; PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: pae:PA2945 cobalamin biosynthesis protein CobW
YP_001566761.1	PFAM: luciferase family protein; KEGG: nha:Nham_0958 luciferase-like
YP_001566762.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eli:ELI_07945 ferrichrome ABC transporter ATP-binding protein
YP_001566763.1	PFAM: transport system permease protein; KEGG: mes:Meso_1443 transport system permease protein
YP_001566764.1	PFAM: periplasmic binding protein; KEGG: rxy:Rxyl_2468 periplasmic binding protein
YP_001566765.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cte:CT0935 TonB-dependent receptor-related protein
YP_001566766.1	PFAM: CHAD domain containing protein; KEGG: aav:Aave_4030 adenylate cyclase
YP_001566767.1	PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: bch:Bcen2424_4448 YbaK/prolyl-tRNA synthetase associated region
YP_001566768.1	PFAM: YheO domain protein; KEGG: rme:Rmet_4823 hypothetical protein
YP_001566769.1	catalyzes the formation of 2-oxobutanoate from L-threonine or the formation of pyruvate from serine
YP_001566770.1	PFAM: NUDIX hydrolase; KEGG: pna:Pnap_3721 NUDIX hydrolase
YP_001566771.1	PFAM: band 7 protein; KEGG: bbt:BBta_5114 hypothetical protein
YP_001566772.1	KEGG: bbt:BBta_5115 hypothetical protein
YP_001566773.1	PFAM: phosphotransferase KptA/Tpt1; KEGG: rfr:Rfer_1178 hypothetical protein
YP_001566774.1	PFAM: conserved hypothetical protein; KEGG: pfl:PFL_5821 hypothetical protein
YP_001566775.1	PFAM: ADP-ribosylation/Crystallin J1; KEGG: pfl:PFL_4115 ADP-ribosylglycohydrolase family protein
YP_001566776.1	PFAM: Fimbrial protein; KEGG: rme:Rmet_2545 fimbrial protein
YP_001566777.1	KEGG: bur:Bcep18194_B0494 hypothetical protein
YP_001566778.1	PFAM: extracellular solute-binding protein family 3; KEGG: pst:PSPTO_2627 amino acid ABC transporter, periplasmic amino acid-binding protein
YP_001566779.1	PFAM: extracellular solute-binding protein family 3; KEGG: bxe:Bxe_C1129 ABC polar amino acid family transporter, periplasmic ligand binding protein
YP_001566780.1	PFAM: extracellular solute-binding protein family 3; KEGG: bxe:Bxe_C1129 ABC polar amino acid family transporter, periplasmic ligand binding protein
YP_001566781.1	PFAM: FAD linked oxidase domain protein; KEGG: bpe:BP3139 putative oxidoreductase
YP_001566782.1	PFAM: aminotransferase class I and II; KEGG: pst:PSPTO_2925 aspartate aminotransferase
YP_001566783.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pst:PSPTO_2628 amino acid ABC transporter, permease protein
YP_001566784.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pst:PSPTO_2629 amino acid ABC transporter, permease protein
YP_001566785.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pst:PSPTO_2630 amino acid ABC transporter, ATP-binding protein
YP_001566786.1	KEGG: bxe:Bxe_C1132 hypothetical protein
YP_001566787.1	KEGG: bxe:Bxe_C1131 cystathionine beta-lyase; TIGRFAM: cystathionine beta-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein
YP_001566788.1	PFAM: Rhodanese domain protein; KEGG: bxe:Bxe_B2410 putative rhodanese-like domain protein
YP_001566789.1	PFAM: conserved hypothetical protein; KEGG: reu:Reut_B3949 hypothetical protein
YP_001566790.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rso:RSc3176 hypothetical protein
YP_001566791.1	KEGG: bur:Bcep18194_B0957 hypothetical protein
YP_001566792.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_B0958 short-chain dehydrogenase/reductase SDR
YP_001566793.1	PFAM: helix-turn-helix HxlR type; KEGG: bur:Bcep18194_B0959 putative transcriptional regulator
YP_001566794.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: pmy:Pmen_3327 transcriptional regulator, AraC family
YP_001566795.1	PFAM: ThiJ/PfpI domain protein; KEGG: rfr:Rfer_2521 ThiJ/PfpI
YP_001566796.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: pfl:PFL_4987 hypothetical protein
YP_001566797.1	PFAM: beta-Ig-H3/fasciclin; KEGG: aav:Aave_3256 beta-Ig-H3/fasciclin
YP_001566798.1	KEGG: bur:Bcep18194_C6576 hypothetical protein
YP_001566800.1	TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: bja:bll5044 manganese transport protein
YP_001566801.1	SMART: Rhodanese domain protein; KEGG: pna:Pnap_0538 rhodanese domain protein
YP_001566802.1	KEGG: pna:Pnap_0539 serine O-acetyltransferase
YP_001566803.1	PFAM: helix-turn-helix domain protein; KEGG: pna:Pnap_0540 helix-turn-helix domain protein
YP_001566804.1	KEGG: mms:mma_2536 major membrane protein I
YP_001566805.1	TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: pna:Pnap_0543 cysteine desulfurases, SufS subfamily
YP_001566806.1	PFAM: Fimbrial protein; KEGG: rme:Rmet_2545 fimbrial protein
YP_001566807.1	PFAM: conserved hypothetical protein; KEGG: reu:Reut_B5438 hypothetical protein
YP_001566808.1	PFAM: conserved hypothetical protein; KEGG: reh:H16_B1820 probable extra-cytoplasmic solute receptor
YP_001566809.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: reh:H16_B1819 D-3-phosphoglycerate dehydrogenase
YP_001566810.1	PFAM: Dimethylmenaquinone methyltransferase; KEGG: reh:H16_B1818 demethylmenaquinone methyltransferase
YP_001566811.1	PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: reh:H16_B1817 L-lactate cytochrome c reductase
YP_001566812.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_B1816 transcriptional regulator, LysR-family
YP_001566813.1	PFAM: GCN5-related N-acetyltransferase; KEGG: gur:Gura_0749 GCN5-related N-acetyltransferase
YP_001566814.1	PFAM: Tail Collar domain protein; KEGG: son:SO_0185 hypothetical microcystin dependent protein
YP_001566815.1	PFAM: Tail Collar domain protein; KEGG: aba:Acid345_2454 phage tail collar
YP_001566816.1	PFAM: Tail Collar domain protein; KEGG: mlo:mll4441 microcystin dependent protein MdpB
YP_001566817.1	PFAM: cell surface receptor IPT/TIG domain protein; Ig family protein; KEGG: rpd:RPD_3003 outer membrane autotransporter barrel
YP_001566818.1	KEGG: bbr:BB3303 hypothetical protein
YP_001566819.1	PFAM: Endoribonuclease L-PSP; KEGG: pol:Bpro_2665 endoribonuclease L-PSP
YP_001566820.1	PFAM: protein of unknown function DUF990; KEGG: aav:Aave_2071 protein of unknown function DUF990
YP_001566821.1	KEGG: reu:Reut_A1068 putative ABC transporter permease protein
YP_001566822.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: reu:Reut_A1069 ABC transporter related
YP_001566823.1	TIGRFAM: potassium efflux system protein; PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: pmy:Pmen_2368 potassium efflux system protein
YP_001566824.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pen:PSEEN3005 hypothetical protein
YP_001566825.1	TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: ajs:Ajs_2406 TonB family protein
YP_001566826.1	SMART: Helicase-like, DEXD box c2 type; helicase c2; KEGG: ajs:Ajs_2428 helicase C2
YP_001566827.1	PFAM: VRR-NUC domain protein; KEGG: ajs:Ajs_2429 hypothetical protein
YP_001566828.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bja:bll7249 oxidoreductase
YP_001566829.1	KEGG: reh:H16_B1205 hypothetical protein
YP_001566830.1	KEGG: reh:H16_B1204 hypothetical protein
YP_001566831.1	PFAM: peptidase S15; X-Pro dipeptidyl-peptidase domain protein; KEGG: bra:BRADO1420 aminopeptidase; homologous to antibiotic hydrolase or cocain esterase
YP_001566832.1	PFAM: conserved hypothetical protein; KEGG: rme:Rmet_3671 uncharacterized protein UPF0065
YP_001566833.1	PFAM: porin Gram-negative type; KEGG: reh:H16_A1305 outer membrane protein (porin)
YP_001566834.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ccr:CC_1621 transcriptional regulator, LysR family
YP_001566835.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pap:PSPA7_2932 probable permease of ABC transporter
YP_001566836.1	KEGG: ppu:PP_3636 sulfonate ABC transporter, periplasmic sulfonate-binding protein, putative
YP_001566837.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pau:PA14_34500 putative ATP-binding component of ABC transporter
YP_001566838.1	KEGG: pau:PA14_34490 putative acyl-CoA dehydrogenase
YP_001566839.1	TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: bxe:Bxe_B1537 alkylhydroperoxidase AhpD core
YP_001566840.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_B1536 putative transcriptional regulator, AraC family
YP_001566841.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; Cupin 2 conserved barrel domain protein; KEGG: bur:Bcep18194_C6884 transcriptional regulator, AraC family
YP_001566842.1	PFAM: major facilitator superfamily MFS_1; KEGG: aav:Aave_2124 major facilitator superfamily MFS_1
YP_001566843.1	PFAM: conserved hypothetical protein; KEGG: vei:Veis_0038 uncharacterized protein UPF0065
YP_001566844.1	catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate
YP_001566845.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: reu:Reut_B3951 regulatory protein GntR, HTH:GntR, C-terminal
YP_001566846.1	PFAM: plasmid stabilization system; KEGG: bam:Bamb_6594 plasmid stabilization system
YP_001566847.1	KEGG: vei:Veis_2291 putative transcriptional regulators, CopG/Arc/MetJ family
YP_001566848.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: rru:Rru_A3128 transcriptional regulator, AraC family
YP_001566849.1	PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: rru:Rru_A3127 pyridoxamine 5'-phosphate oxidase-related, FMN-binding
YP_001566850.1	PFAM: MgtC/SapB transporter; KEGG: bpa:BPP3813 putative Mg(2+) transporter
YP_001566851.1	PFAM: Chloride channel core; KEGG: aav:Aave_4712 Cl-channel, voltage-gated family protein
YP_001566852.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bvi:Bcep1808_4280 transcriptional regulator, LysR family
YP_001566853.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bvi:Bcep1808_4278 alcohol dehydrogenase, zinc-binding domain protein
YP_001566854.1	PFAM: PilT protein domain protein; KEGG: vei:Veis_3474 PilT protein domain protein
YP_001566855.1	KEGG: vei:Veis_3475 plasmid stability protein StbC
YP_001566856.1	catalyzes the formation of precorrin 6x from precorrin 5
YP_001566857.1	TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: rsp:RSP_2821 putative precorrin-4 C11-methyltransferase
YP_001566858.1	KEGG: sil:SPO2870 cobalamin biosynthesis domain protein
YP_001566859.1	KEGG: rsh:Rsph17029_1473 precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
YP_001566860.1	KEGG: rsq:Rsph17025_1522 precorrin-6x reductase; TIGRFAM: precorrin-6x reductase; PFAM: Precorrin-6x reductase CbiJ/CobK
YP_001566861.1	TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: rsh:Rsph17029_1471 precorrin-3B C17-methyltransferase
YP_001566862.1	TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bja:blr3266 precorrin-2 C20 methyltransferase
YP_001566863.1	catalyzes the interconversion of precorrin-8X and hydrogenobyrinate
YP_001566864.1	TIGRFAM: precorrin-3B synthase; PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: sit:TM1040_2211 precorrin-3B synthase
YP_001566865.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bte:BTH_I2374 methyl-accepting chemotaxis protein
YP_001566866.1	PFAM: FecR protein; KEGG: neu:NE1191 putative transmembrane sensor
YP_001566867.1	KEGG: rme:Rmet_2396 thiol:disulfide interchange protein
YP_001566868.1	PFAM: Glutathione S-transferase domain; KEGG: ccr:CC_2901 glutathione S-transferase family protein
YP_001566869.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: eca:ECA3446 multidrug resistance outer membrane protein
YP_001566870.1	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: pst:PSPTO_2592 AcrB/AcrD/AcrF family protein
YP_001566871.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pen:PSEEN3125 multidrug efflux RND membrane fusion protein MexC
YP_001566872.1	KEGG: pau:PA14_60860 transcriptional regulatory protein NfxB
YP_001566873.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_2782 transcriptional regulator, LysR family
YP_001566874.1	Catalyzes the conversion of citrate to isocitrate
YP_001566875.1	catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate; also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity
YP_001566876.1	PFAM: thioesterase superfamily protein; KEGG: ajs:Ajs_1636 thioesterase superfamily protein
YP_001566877.1	PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; KEGG: vei:Veis_4449 protein of unknown function DUF955
YP_001566878.1	PFAM: conserved hypothetical protein; KEGG: aav:Aave_1446 hypothetical protein
YP_001566879.1	KEGG: har:HEAR3316 hypothetical protein
YP_001566880.1	PFAM: protein of unknown function DUF1452; KEGG: bxe:Bxe_C0074 hypothetical protein
YP_001566881.1	KEGG: mfa:Mfla_1423 hypothetical protein
YP_001566882.1	KEGG: ajs:Ajs_0503 HAD-superfamily hydrolase, subfamily IIB; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: trehalose-phosphatase
YP_001566883.1	PFAM: glycosyl transferase family 20; KEGG: pna:Pnap_0524 alpha,alpha-trehalose-phosphate synthase (UDP-forming)
YP_001566884.1	KEGG: bxe:Bxe_A2027 putative acyl-CoA dehydrogenase-related protein
YP_001566885.1	PFAM: LmbE family protein; KEGG: rha:RHA1_ro00129 hypothetical protein
YP_001566886.1	PFAM: NodS family protein; Methyltransferase type 12; KEGG: bxe:Bxe_A2028 putative methyltransferase protein
YP_001566887.1	PFAM: glycosyl transferase family 2; KEGG: bxe:Bxe_A2029 putative glycosyl transferase, family 2
YP_001566888.1	PFAM: DinB family protein; KEGG: bch:Bcen2424_1988 DinB family protein
YP_001566889.1	TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: atc:AGR_L_1187 hypothetical protein PA1367
YP_001566890.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: atc:AGR_L_1189 hypothetical protein
YP_001566891.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bch:Bcen2424_1984 transcriptional regulator, GntR family
YP_001566892.1	KEGG: cvi:CV_3228 hypothetical protein
YP_001566893.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pna:Pnap_1455 short-chain dehydrogenase/reductase SDR
YP_001566894.1	KEGG: mpt:Mpe_A0231 lipoprotein, putative
YP_001566895.1	KEGG: mpt:Mpe_A0232 sodium:galactoside symporter family protein
YP_001566896.1	KEGG: pna:Pnap_1452 hypothetical protein
YP_001566897.1	PFAM: putative RNA methylase; Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mpt:Mpe_A0234 cyclopropane-fatty-acyl-phospholipid synthase
YP_001566898.1	PFAM: protein of unknown function DUF1365; KEGG: mpt:Mpe_A0235 hypothetical protein
YP_001566899.1	PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mpt:Mpe_A0236 putative dehydrogenase
YP_001566900.1	PFAM: regulatory protein TetR; KEGG: mpt:Mpe_A3699 putative transcription regulator, TetR family
YP_001566901.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bbt:BBta_5602 putative transcriptional regulatory protein, AraC/XylS family
YP_001566902.1	PFAM: cell surface receptor IPT/TIG domain protein; KEGG: bra:BRADO3823 hypothetical protein
YP_001566903.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: psb:Psyr_2580 sigma-70 region 2
YP_001566904.1	PFAM: FecR protein; KEGG: neu:NE1098 putative transmembrane sensor
YP_001566905.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rme:Rmet_1118 TonB-dependent siderophore receptor
YP_001566906.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: azo:azo2373 putative sigma-70 factor, ECF subfamily
YP_001566907.1	PFAM: FecR protein; KEGG: neu:NE0979 putative transmembrane sensor
YP_001566908.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: bur:Bcep18194_A4504 TonB-dependent siderophore receptor
YP_001566909.1	KEGG: rso:RSc0801 putative lipoprotein transmembrane
YP_001566910.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: aci:ACIAD2049 putative ferric siderophore receptor protein
YP_001566911.1	KEGG: ddi:DDBDRAFT_0192024 hypothetical protein
YP_001566912.1	TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS); KEGG: ajs:Ajs_0641 glucosamine--fructose-6-phosphate aminotransferase, isomerizing
YP_001566913.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: aav:Aave_4037 transcriptional regulator, AsnC family
YP_001566914.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pen:PSEEN1308 hypothetical protein
YP_001566915.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ajs:Ajs_0637 histidine kinase
YP_001566916.1	TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: ajs:Ajs_0636 UDP-N-acetylglucosamine pyrophosphorylase
YP_001566917.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_4044 transcriptional regulator, LysR family
YP_001566918.1	catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr)
YP_001566919.1	PFAM: peptidase M23B; KEGG: ajs:Ajs_0631 peptidase M23B
YP_001566920.1	catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling
YP_001566921.1	PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: reu:Reut_B5339 xanthine/uracil/vitamin C permease:sulphate transporter
YP_001566922.1	KEGG: mpt:Mpe_A0798 xanthine dehydrogenase; TIGRFAM: xanthine dehydrogenase, molybdopterin binding subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding
YP_001566923.1	TIGRFAM: xanthine dehydrogenase, small subunit; PFAM: ferredoxin; molybdopterin dehydrogenase FAD-binding; [2Fe-2S]-binding domain protein; CO dehydrogenase flavoprotein domain protein; KEGG: mpt:Mpe_A0799 putative xanthine dehydrogenase (subunit A) oxidoreductase protein
YP_001566924.1	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_2090 major facilitator superfamily MFS_1
YP_001566925.1	essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors
YP_001566926.1	forms a direct contact with the tRNA during translation
YP_001566927.1	in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit
YP_001566928.1	PFAM: protein of unknown function DUF519; KEGG: vei:Veis_1788 protein of unknown function DUF519
YP_001566929.1	TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: ajs:Ajs_0622 rare lipoprotein A
YP_001566930.1	KEGG: ajs:Ajs_0620 5,10-methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase
YP_001566931.1	PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: ajs:Ajs_0619 ribosomal RNA methyltransferase RrmJ/FtsJ
YP_001566932.1	catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine
YP_001566933.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pfl:PFL_4569 KDP operon transcriptional regulatory protein KdpE
YP_001566934.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Osmosensitive K channel His kinase sensor; UspA domain protein; KEGG: pfl:PFL_4570 sensor histidine kinase KdpD
YP_001566935.1	PFAM: conserved hypothetical protein; KEGG: mms:mma_0168 hypothetical protein
YP_001566936.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase, B subunit; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: pfl:PFL_4571 K+-transporting ATPase, B subunit
YP_001566937.1	KEGG: pfl:PFL_4572 K+-transporting ATPase, C subunit; TIGRFAM: potassium-transporting ATPase, C subunit; PFAM: K transporting ATPase KdpC subunit
YP_001566938.1	catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions
YP_001566939.1	stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein
YP_001566940.1	KEGG: aav:Aave_4066 hypothetical protein
YP_001566941.1	KEGG: aav:Aave_4063 hypothetical protein
YP_001566942.1	KEGG: aav:Aave_4064 hypothetical protein
YP_001566943.1	PFAM: glycosyl transferase family 2; KEGG: aav:Aave_4065 glycosyl transferase, family 2
YP_001566944.1	KEGG: vei:Veis_0689 hypothetical protein
YP_001566945.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; KEGG: ajs:Ajs_0616 HAD-superfamily hydrolase, subfamily IIB
YP_001566946.1	PFAM: Fimbrial protein; KEGG: reu:Reut_A1694 fimbrial protein
YP_001566947.1	PFAM: pili assembly chaperone; KEGG: bam:Bamb_4023 pili assembly chaperone
YP_001566948.1	PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: bam:Bamb_4024 fimbrial biogenesis outer membrane usher protein
YP_001566949.1	PFAM: Fimbrial protein; KEGG: ent:Ent638_0987 fimbrial protein
YP_001566950.1	PFAM: pili assembly chaperone; KEGG: bam:Bamb_4023 pili assembly chaperone
YP_001566951.1	PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: bam:Bamb_4024 fimbrial biogenesis outer membrane usher protein
YP_001566953.1	PFAM: Fimbrial protein; KEGG: spe:Spro_2875 fimbrial protein
YP_001566954.1	proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus; forms dimers and is a peripherally membrane-associated protein
YP_001566955.1	TIGRFAM: SSS sodium solute transporter superfamily; sodium/proline symporter; PFAM: Na+/solute symporter; KEGG: ajs:Ajs_4063 sodium/proline symporter
YP_001566956.1	TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: aav:Aave_3447 TRAP dicarboxylate transporter, DctP subunit
YP_001566957.1	PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: aav:Aave_3446 tripartite ATP-independent periplasmic transporter, DctQ component
YP_001566958.1	TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: aav:Aave_3445 TRAP dicarboxylate transporter, DctM subunit
YP_001566959.1	PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bxe:Bxe_B0696 transcriptional regulator, IclR family
YP_001566960.1	PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: vei:Veis_4282 glucose-methanol-choline oxidoreductase
YP_001566961.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: vei:Veis_4283 major facilitator superfamily MFS_1
YP_001566962.1	KEGG: aav:Aave_0186 hypothetical protein
YP_001566963.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pol:Bpro_4251 transcriptional regulator, LysR family
YP_001566964.1	PFAM: major facilitator superfamily MFS_1; KEGG: pol:Bpro_4250 major facilitator superfamily MFS_1
YP_001566965.1	KEGG: aav:Aave_4341 excinuclease ABC, A subunit; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001566967.1	KEGG: ajs:Ajs_3751 porin, gram-negative type
YP_001566968.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: aav:Aave_4345 major facilitator superfamily MFS_1
YP_001566969.1	PFAM: protein of unknown function DUF485; KEGG: bur:Bcep18194_B1981 protein of unknown function DUF485
YP_001566970.1	TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: pnu:Pnuc_0535 SSS sodium solute transporter superfamily
YP_001566971.1	PFAM: PEBP family protein; KEGG: aav:Aave_4694 PEBP family protein
YP_001566972.1	3'-5' exonuclease of DNA polymerase III
YP_001566973.1	PFAM: cyclic nucleotide-binding; CBS domain containing protein; protein of unknown function DUF294 nucleotidyltransferase putative; KEGG: pna:Pnap_0480 cyclic nucleotide-binding protein
YP_001566974.1	PFAM: DSBA oxidoreductase; KEGG: ajs:Ajs_3753 DsbA oxidoreductase
YP_001566975.1	PFAM: protein of unknown function DUF1289; KEGG: ajs:Ajs_3754 protein of unknown function DUF1289
YP_001566976.1	PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: aav:Aave_4348 YbaK/prolyl-tRNA synthetase associated region
YP_001566977.1	PFAM: pyruvate carboxyltransferase; KEGG: ajs:Ajs_3757 pyruvate carboxyltransferase
YP_001566978.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bbr:BB2439 probable LysR-family transcriptional regulator
YP_001566979.1	PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: bbr:BB2438 probable 3-hydroxybutyryl-CoA dehydrogenase
YP_001566980.1	PFAM: protein of unknown function DUF849; KEGG: vei:Veis_0513 protein of unknown function DUF849
YP_001566981.1	PFAM: conserved hypothetical protein; KEGG: bbr:BB1095 hypothetical protein
YP_001566982.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: ajs:Ajs_3758 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
YP_001566983.1	PFAM: biotin/lipoyl attachment domain-containing protein; phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: ajs:Ajs_3759 carbamoyl-phosphate synthase L chain, ATP-binding
YP_001566984.1	KEGG: ajs:Ajs_3760 putative transmembrane protein
YP_001566985.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ajs:Ajs_3761 enoyl-CoA hydratase/isomerase
YP_001566986.1	PFAM: carboxyl transferase; KEGG: ajs:Ajs_3763 propionyl-CoA carboxylase
YP_001566987.1	TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; KEGG: bxe:Bxe_B1516 Na+/H+ antiporter, CPA1 family
YP_001566988.1	activates fatty acids by binding to coenzyme A
YP_001566989.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pna:Pnap_0469 helix-turn-helix-domain containing protein, AraC type
YP_001566990.1	PFAM: Glutathione S-transferase domain; KEGG: ajs:Ajs_3767 glutathione S-transferase, N-terminal domain
YP_001566991.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: aav:Aave_4360 HAD-superfamily hydrolase, subfamily IA, variant 3
YP_001566992.1	KEGG: aav:Aave_3538 hypothetical protein
YP_001566993.1	PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: aav:Aave_2497 two component transcriptional regulator, LuxR family
YP_001566994.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: aav:Aave_4361 integral membrane sensor hybrid histidine kinase
YP_001566995.1	KEGG: aav:Aave_4362 hypothetical protein
YP_001566996.1	KEGG: aav:Aave_4363 hypothetical protein
YP_001566997.1	PFAM: alpha/beta hydrolase fold; Ndr family protein; KEGG: rfr:Rfer_2846 alpha/beta hydrolase
YP_001566998.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_3774 acyl-CoA dehydrogenase domain protein
YP_001566999.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ajs:Ajs_3775 short-chain dehydrogenase/reductase SDR
YP_001567000.1	PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: xau:Xaut_1318 pyridoxamine 5'-phosphate oxidase-related FMN-binding
YP_001567001.1	KEGG: ajs:Ajs_3776 acetyl-CoA acetyltransferases; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase
YP_001567002.1	catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity; unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol
YP_001567003.1	PFAM: carbonic anhydrase; KEGG: ajs:Ajs_3778 carbonate dehydratase
YP_001567004.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_3779 acyl-CoA dehydrogenase domain protein
YP_001567005.1	PFAM: thioesterase superfamily protein; KEGG: bov:BOV_A0326 hypothetical protein
YP_001567006.1	PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: ajs:Ajs_3780 putative transcriptional regulator, MerR family
YP_001567007.1	catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione
YP_001567008.1	TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; KEGG: ajs:Ajs_3908 benzoate transporter
YP_001567009.1	PFAM: K potassium transporter; KEGG: aav:Aave_4541 K+ potassium transporter
YP_001567010.1	TIGRFAM: glutamate--cysteine ligase; PFAM: glutamate--cysteine ligase GshA; KEGG: ajs:Ajs_3910 glutamate--cysteine ligase
YP_001567011.1	PFAM: cation transporter; KEGG: ajs:Ajs_3911 cation transporter
YP_001567012.1	involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain
YP_001567013.1	Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway
YP_001567014.1	required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA
YP_001567015.1	PFAM: Rare lipoprotein B; KEGG: ajs:Ajs_3916 rare lipoprotein B
YP_001567016.1	leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase
YP_001567017.1	PFAM: MscS Mechanosensitive ion channel; KEGG: ajs:Ajs_3919 MscS mechanosensitive ion channel
YP_001567018.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: aav:Aave_4551 biopolymer transport protein ExbD/TolR
YP_001567019.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: ajs:Ajs_3921 MotA/TolQ/ExbB proton channel
YP_001567020.1	PFAM: oxidoreductase domain protein; dihydrodipicolinate reductase; KEGG: ajs:Ajs_3922 dihydrodipicolinate reductase
YP_001567021.1	PFAM: SmpA/OmlA domain protein; KEGG: aav:Aave_4554 SmpA/OmlA domain protein
YP_001567022.1	PFAM: ferric-uptake regulator; KEGG: ajs:Ajs_3924 ferric uptake regulator, Fur family
YP_001567023.1	PFAM: Protein of unknown function DUF1800; KEGG: aav:Aave_2282 hypothetical protein
YP_001567024.1	PFAM: protein of unknown function DUF1501; KEGG: aav:Aave_2281 protein of unknown function DUF1501
YP_001567025.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bte:BTH_I0997 RNA polymerase sigma-70 factor, ECF family
YP_001567026.1	PFAM: NUDIX hydrolase; KEGG: ajs:Ajs_4074 NUDIX hydrolase
YP_001567027.1	PFAM: GCN5-related N-acetyltransferase; KEGG: ajs:Ajs_4076 GCN5-related N-acetyltransferase
YP_001567028.1	PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: maq:Maqu_3676 response regulator receiver modulated metal dependent phosphohydrolase
YP_001567029.1	PFAM: Hpt domain protein; KEGG: cvi:CV_1190 probable sensor/response regulator hybrid
YP_001567030.1	KEGG: maq:Maqu_3675 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; MHYT domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001567031.1	KEGG: ajs:Ajs_4100 hypothetical protein
YP_001567032.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_4102 transcriptional regulator, LysR family
YP_001567033.1	catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate
YP_001567034.1	PFAM: conserved hypothetical protein; KEGG: reu:Reut_B5589 hypothetical protein
YP_001567035.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: aav:Aave_4749 GntR domain protein
YP_001567036.1	KEGG: aav:Aave_4750 ABC branched chain amino acid family transporter, periplasmic ligand binding protein
YP_001567037.1	PFAM: inner-membrane translocator; KEGG: bxe:Bxe_B2565 ABC branched chain amino acid family transporter, inner membrane subunit
YP_001567038.1	PFAM: inner-membrane translocator; KEGG: aav:Aave_4752 inner-membrane translocator
YP_001567039.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_4753 ABC transporter-related protein
YP_001567040.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_4754 ABC transporter-related protein
YP_001567041.1	KEGG: aav:Aave_4755 amidase, hydantoinase/carbamoylase family; TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20
YP_001567042.1	PFAM: MlrC domain protein; Microcystin LR degradation protein MlrC-like; KEGG: aav:Aave_4756 MlrC domain protein
YP_001567043.1	NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate
YP_001567044.1	PFAM: guanine-specific ribonuclease N1 and T1; KEGG: aav:Aave_4760 guanine-specific ribonuclease N1 and T1
YP_001567045.1	KEGG: ajs:Ajs_4108 hypothetical protein
YP_001567046.1	catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin
YP_001567047.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: ajs:Ajs_4111 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_001567048.1	PFAM: Organic solvent tolerance protein; KEGG: aav:Aave_4764 organic solvent tolerance protein
YP_001567049.1	PFAM: aminoglycoside phosphotransferase; KEGG: aav:Aave_4765 aminoglycoside phosphotransferase
YP_001567050.1	in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase
YP_001567051.1	PFAM: alpha/beta hydrolase fold; KEGG: ajs:Ajs_4120 alpha/beta hydrolase fold
YP_001567052.1	PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: aav:Aave_4771 peptidase M20
YP_001567053.1	PFAM: regulatory protein MerR; KEGG: azo:azo1478 probable MerR-family transcriptional regulator
YP_001567054.1	PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: ppf:Pput_2966 NAD(P)H dehydrogenase (quinone)
YP_001567055.1	PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: pna:Pnap_2092 glycerophosphoryl diester phosphodiesterase
YP_001567056.1	TIGRFAM: methionine biosynthesis protein MetW; PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: aav:Aave_4777 methionine biosynthesis protein MetW
YP_001567057.1	Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine
YP_001567058.1	PFAM: protein of unknown function UPF0016; KEGG: aav:Aave_4779 protein of unknown function UPF0016
YP_001567059.1	PFAM: RNP-1 like RNA-binding protein; KEGG: vei:Veis_0149 RNP-1 like RNA-binding protein
YP_001567060.1	PFAM: RNP-1 like RNA-binding protein; KEGG: aav:Aave_4781 RNP-1-like RNA-binding protein
YP_001567061.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ajs:Ajs_4129 short-chain dehydrogenase/reductase SDR
YP_001567062.1	PFAM: protein of unknown function DUF1239; KEGG: aav:Aave_4783 protein of unknown function DUF1239
YP_001567063.1	TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; KEGG: ajs:Ajs_4131 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family
YP_001567064.1	KEGG: aav:Aave_4785 KpsF/GutQ family protein; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS)
YP_001567065.1	catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis
YP_001567066.1	KEGG: ajs:Ajs_4136 hypothetical protein
YP_001567067.1	PFAM: cyclic nucleotide-binding; KEGG: aav:Aave_4790 cyclic nucleotide-binding protein
YP_001567068.1	in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE
YP_001567069.1	PFAM: 60 kDa inner membrane insertion protein; KEGG: ajs:Ajs_4140 60 kDa inner membrane insertion protein
YP_001567070.1	PFAM: protein of unknown function DUF37; KEGG: aav:Aave_4794 protein of unknown function DUF37
YP_001567071.1	KEGG: ajs:Ajs_4142 hypothetical protein
YP_001567072.1	in Escherichia coli transcription of this gene is enhanced by polyamines