-- dump date   	20140619_060700
-- class       	Genbank::Contig
-- table       	contig_comment
-- id	comment
NC_010002.1	PROVISIONAL REFSEQ: This record has not yet been subject to finalPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000884.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000884. URL -- http://www.jgi.doe.govPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000884. URL -- http://www.jgi.doe.gov JGI Project ID: 4002762PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000884. URL -- http://www.jgi.doe.gov JGI Project ID: 4002762 Source DNA available from David SchleheckPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000884. URL -- http://www.jgi.doe.gov JGI Project ID: 4002762 Source DNA available from David Schleheck (david.schleheck@unsw.edu.au)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000884. URL -- http://www.jgi.doe.gov JGI Project ID: 4002762 Source DNA available from David Schleheck (david.schleheck@unsw.edu.au) Bacteria available from DSMZ: DSM 14801 (http://www.dsmz.de)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000884. URL -- http://www.jgi.doe.gov JGI Project ID: 4002762 Source DNA available from David Schleheck (david.schleheck@unsw.edu.au) Bacteria available from DSMZ: DSM 14801 (http://www.dsmz.de) Delftia acidovorans SPH-1 was isolated from a sewage treatmentPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000884. URL -- http://www.jgi.doe.gov JGI Project ID: 4002762 Source DNA available from David Schleheck (david.schleheck@unsw.edu.au) Bacteria available from DSMZ: DSM 14801 (http://www.dsmz.de) Delftia acidovorans SPH-1 was isolated from a sewage treatment plant in Germany and is part of a defined three-member bacterialPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000884. URL -- http://www.jgi.doe.gov JGI Project ID: 4002762 Source DNA available from David Schleheck (david.schleheck@unsw.edu.au) Bacteria available from DSMZ: DSM 14801 (http://www.dsmz.de) Delftia acidovorans SPH-1 was isolated from a sewage treatment plant in Germany and is part of a defined three-member bacterial community which completely mineralises representative congeners ofPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000884. URL -- http://www.jgi.doe.gov JGI Project ID: 4002762 Source DNA available from David Schleheck (david.schleheck@unsw.edu.au) Bacteria available from DSMZ: DSM 14801 (http://www.dsmz.de) Delftia acidovorans SPH-1 was isolated from a sewage treatment plant in Germany and is part of a defined three-member bacterial community which completely mineralises representative congeners of linear alkylbenzenesulfonate (LAS) surfactants (reference 1). ThePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000884. URL -- http://www.jgi.doe.gov JGI Project ID: 4002762 Source DNA available from David Schleheck (david.schleheck@unsw.edu.au) Bacteria available from DSMZ: DSM 14801 (http://www.dsmz.de) Delftia acidovorans SPH-1 was isolated from a sewage treatment plant in Germany and is part of a defined three-member bacterial community which completely mineralises representative congeners of linear alkylbenzenesulfonate (LAS) surfactants (reference 1). The community genome was kindly established by DOE-JGI as part of thePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000884. URL -- http://www.jgi.doe.gov JGI Project ID: 4002762 Source DNA available from David Schleheck (david.schleheck@unsw.edu.au) Bacteria available from DSMZ: DSM 14801 (http://www.dsmz.de) Delftia acidovorans SPH-1 was isolated from a sewage treatment plant in Germany and is part of a defined three-member bacterial community which completely mineralises representative congeners of linear alkylbenzenesulfonate (LAS) surfactants (reference 1). The community genome was kindly established by DOE-JGI as part of the 2006 Microbes Program (see also JGI Project Id 4003071PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000884. URL -- http://www.jgi.doe.gov JGI Project ID: 4002762 Source DNA available from David Schleheck (david.schleheck@unsw.edu.au) Bacteria available from DSMZ: DSM 14801 (http://www.dsmz.de) Delftia acidovorans SPH-1 was isolated from a sewage treatment plant in Germany and is part of a defined three-member bacterial community which completely mineralises representative congeners of linear alkylbenzenesulfonate (LAS) surfactants (reference 1). The community genome was kindly established by DOE-JGI as part of the 2006 Microbes Program (see also JGI Project Id 4003071 [Parvibaculum lavamentivorans DS-1] and 4002763 [ComamonasPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000884. URL -- http://www.jgi.doe.gov JGI Project ID: 4002762 Source DNA available from David Schleheck (david.schleheck@unsw.edu.au) Bacteria available from DSMZ: DSM 14801 (http://www.dsmz.de) Delftia acidovorans SPH-1 was isolated from a sewage treatment plant in Germany and is part of a defined three-member bacterial community which completely mineralises representative congeners of linear alkylbenzenesulfonate (LAS) surfactants (reference 1). The community genome was kindly established by DOE-JGI as part of the 2006 Microbes Program (see also JGI Project Id 4003071 [Parvibaculum lavamentivorans DS-1] and 4002763 [Comamonas testosteroni KF-1]). The first-tier organism ParvibaculumPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000884. URL -- http://www.jgi.doe.gov JGI Project ID: 4002762 Source DNA available from David Schleheck (david.schleheck@unsw.edu.au) Bacteria available from DSMZ: DSM 14801 (http://www.dsmz.de) Delftia acidovorans SPH-1 was isolated from a sewage treatment plant in Germany and is part of a defined three-member bacterial community which completely mineralises representative congeners of linear alkylbenzenesulfonate (LAS) surfactants (reference 1). The community genome was kindly established by DOE-JGI as part of the 2006 Microbes Program (see also JGI Project Id 4003071 [Parvibaculum lavamentivorans DS-1] and 4002763 [Comamonas testosteroni KF-1]). The first-tier organism Parvibaculum lavamentivorans converts LAS surfactants into manyPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000884. URL -- http://www.jgi.doe.gov JGI Project ID: 4002762 Source DNA available from David Schleheck (david.schleheck@unsw.edu.au) Bacteria available from DSMZ: DSM 14801 (http://www.dsmz.de) Delftia acidovorans SPH-1 was isolated from a sewage treatment plant in Germany and is part of a defined three-member bacterial community which completely mineralises representative congeners of linear alkylbenzenesulfonate (LAS) surfactants (reference 1). The community genome was kindly established by DOE-JGI as part of the 2006 Microbes Program (see also JGI Project Id 4003071 [Parvibaculum lavamentivorans DS-1] and 4002763 [Comamonas testosteroni KF-1]). The first-tier organism Parvibaculum lavamentivorans converts LAS surfactants into many sulfophenylcarboxylates (SPCs), and Delftia acidovorans SPH-1PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000884. URL -- http://www.jgi.doe.gov JGI Project ID: 4002762 Source DNA available from David Schleheck (david.schleheck@unsw.edu.au) Bacteria available from DSMZ: DSM 14801 (http://www.dsmz.de) Delftia acidovorans SPH-1 was isolated from a sewage treatment plant in Germany and is part of a defined three-member bacterial community which completely mineralises representative congeners of linear alkylbenzenesulfonate (LAS) surfactants (reference 1). The community genome was kindly established by DOE-JGI as part of the 2006 Microbes Program (see also JGI Project Id 4003071 [Parvibaculum lavamentivorans DS-1] and 4002763 [Comamonas testosteroni KF-1]). The first-tier organism Parvibaculum lavamentivorans converts LAS surfactants into many sulfophenylcarboxylates (SPCs), and Delftia acidovorans SPH-1 represents a second-tier organism by completely degrading some ofPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000884. URL -- http://www.jgi.doe.gov JGI Project ID: 4002762 Source DNA available from David Schleheck (david.schleheck@unsw.edu.au) Bacteria available from DSMZ: DSM 14801 (http://www.dsmz.de) Delftia acidovorans SPH-1 was isolated from a sewage treatment plant in Germany and is part of a defined three-member bacterial community which completely mineralises representative congeners of linear alkylbenzenesulfonate (LAS) surfactants (reference 1). The community genome was kindly established by DOE-JGI as part of the 2006 Microbes Program (see also JGI Project Id 4003071 [Parvibaculum lavamentivorans DS-1] and 4002763 [Comamonas testosteroni KF-1]). The first-tier organism Parvibaculum lavamentivorans converts LAS surfactants into many sulfophenylcarboxylates (SPCs), and Delftia acidovorans SPH-1 represents a second-tier organism by completely degrading some of these SPCs; Comamonas testosteroni degrades a different set ofPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000884. URL -- http://www.jgi.doe.gov JGI Project ID: 4002762 Source DNA available from David Schleheck (david.schleheck@unsw.edu.au) Bacteria available from DSMZ: DSM 14801 (http://www.dsmz.de) Delftia acidovorans SPH-1 was isolated from a sewage treatment plant in Germany and is part of a defined three-member bacterial community which completely mineralises representative congeners of linear alkylbenzenesulfonate (LAS) surfactants (reference 1). The community genome was kindly established by DOE-JGI as part of the 2006 Microbes Program (see also JGI Project Id 4003071 [Parvibaculum lavamentivorans DS-1] and 4002763 [Comamonas testosteroni KF-1]). The first-tier organism Parvibaculum lavamentivorans converts LAS surfactants into many sulfophenylcarboxylates (SPCs), and Delftia acidovorans SPH-1 represents a second-tier organism by completely degrading some of these SPCs; Comamonas testosteroni degrades a different set of SPCs.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000884. URL -- http://www.jgi.doe.gov JGI Project ID: 4002762 Source DNA available from David Schleheck (david.schleheck@unsw.edu.au) Bacteria available from DSMZ: DSM 14801 (http://www.dsmz.de) Delftia acidovorans SPH-1 was isolated from a sewage treatment plant in Germany and is part of a defined three-member bacterial community which completely mineralises representative congeners of linear alkylbenzenesulfonate (LAS) surfactants (reference 1). The community genome was kindly established by DOE-JGI as part of the 2006 Microbes Program (see also JGI Project Id 4003071 [Parvibaculum lavamentivorans DS-1] and 4002763 [Comamonas testosteroni KF-1]). The first-tier organism Parvibaculum lavamentivorans converts LAS surfactants into many sulfophenylcarboxylates (SPCs), and Delftia acidovorans SPH-1 represents a second-tier organism by completely degrading some of these SPCs; Comamonas testosteroni degrades a different set of SPCs. Contacts: David Schleheck (david.schleheck@unsw.edu.au)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000884. URL -- http://www.jgi.doe.gov JGI Project ID: 4002762 Source DNA available from David Schleheck (david.schleheck@unsw.edu.au) Bacteria available from DSMZ: DSM 14801 (http://www.dsmz.de) Delftia acidovorans SPH-1 was isolated from a sewage treatment plant in Germany and is part of a defined three-member bacterial community which completely mineralises representative congeners of linear alkylbenzenesulfonate (LAS) surfactants (reference 1). The community genome was kindly established by DOE-JGI as part of the 2006 Microbes Program (see also JGI Project Id 4003071 [Parvibaculum lavamentivorans DS-1] and 4002763 [Comamonas testosteroni KF-1]). The first-tier organism Parvibaculum lavamentivorans converts LAS surfactants into many sulfophenylcarboxylates (SPCs), and Delftia acidovorans SPH-1 represents a second-tier organism by completely degrading some of these SPCs; Comamonas testosteroni degrades a different set of SPCs. Contacts: David Schleheck (david.schleheck@unsw.edu.au)           Staffan Kjelleberg (s.kjelleberg@unsw.edu.au)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000884. URL -- http://www.jgi.doe.gov JGI Project ID: 4002762 Source DNA available from David Schleheck (david.schleheck@unsw.edu.au) Bacteria available from DSMZ: DSM 14801 (http://www.dsmz.de) Delftia acidovorans SPH-1 was isolated from a sewage treatment plant in Germany and is part of a defined three-member bacterial community which completely mineralises representative congeners of linear alkylbenzenesulfonate (LAS) surfactants (reference 1). The community genome was kindly established by DOE-JGI as part of the 2006 Microbes Program (see also JGI Project Id 4003071 [Parvibaculum lavamentivorans DS-1] and 4002763 [Comamonas testosteroni KF-1]). The first-tier organism Parvibaculum lavamentivorans converts LAS surfactants into many sulfophenylcarboxylates (SPCs), and Delftia acidovorans SPH-1 represents a second-tier organism by completely degrading some of these SPCs; Comamonas testosteroni degrades a different set of SPCs. Contacts: David Schleheck (david.schleheck@unsw.edu.au)           Staffan Kjelleberg (s.kjelleberg@unsw.edu.au)           Alasdair Cook (alasdair.cook@uni-konstanz.de)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000884. URL -- http://www.jgi.doe.gov JGI Project ID: 4002762 Source DNA available from David Schleheck (david.schleheck@unsw.edu.au) Bacteria available from DSMZ: DSM 14801 (http://www.dsmz.de) Delftia acidovorans SPH-1 was isolated from a sewage treatment plant in Germany and is part of a defined three-member bacterial community which completely mineralises representative congeners of linear alkylbenzenesulfonate (LAS) surfactants (reference 1). The community genome was kindly established by DOE-JGI as part of the 2006 Microbes Program (see also JGI Project Id 4003071 [Parvibaculum lavamentivorans DS-1] and 4002763 [Comamonas testosteroni KF-1]). The first-tier organism Parvibaculum lavamentivorans converts LAS surfactants into many sulfophenylcarboxylates (SPCs), and Delftia acidovorans SPH-1 represents a second-tier organism by completely degrading some of these SPCs; Comamonas testosteroni degrades a different set of SPCs. Contacts: David Schleheck (david.schleheck@unsw.edu.au)           Staffan Kjelleberg (s.kjelleberg@unsw.edu.au)           Alasdair Cook (alasdair.cook@uni-konstanz.de)           Paul Richardson (microbes@cuba.jgi-psf.org)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000884. URL -- http://www.jgi.doe.gov JGI Project ID: 4002762 Source DNA available from David Schleheck (david.schleheck@unsw.edu.au) Bacteria available from DSMZ: DSM 14801 (http://www.dsmz.de) Delftia acidovorans SPH-1 was isolated from a sewage treatment plant in Germany and is part of a defined three-member bacterial community which completely mineralises representative congeners of linear alkylbenzenesulfonate (LAS) surfactants (reference 1). The community genome was kindly established by DOE-JGI as part of the 2006 Microbes Program (see also JGI Project Id 4003071 [Parvibaculum lavamentivorans DS-1] and 4002763 [Comamonas testosteroni KF-1]). The first-tier organism Parvibaculum lavamentivorans converts LAS surfactants into many sulfophenylcarboxylates (SPCs), and Delftia acidovorans SPH-1 represents a second-tier organism by completely degrading some of these SPCs; Comamonas testosteroni degrades a different set of SPCs. Contacts: David Schleheck (david.schleheck@unsw.edu.au)           Staffan Kjelleberg (s.kjelleberg@unsw.edu.au)           Alasdair Cook (alasdair.cook@uni-konstanz.de)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-StanfordPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000884. URL -- http://www.jgi.doe.gov JGI Project ID: 4002762 Source DNA available from David Schleheck (david.schleheck@unsw.edu.au) Bacteria available from DSMZ: DSM 14801 (http://www.dsmz.de) Delftia acidovorans SPH-1 was isolated from a sewage treatment plant in Germany and is part of a defined three-member bacterial community which completely mineralises representative congeners of linear alkylbenzenesulfonate (LAS) surfactants (reference 1). The community genome was kindly established by DOE-JGI as part of the 2006 Microbes Program (see also JGI Project Id 4003071 [Parvibaculum lavamentivorans DS-1] and 4002763 [Comamonas testosteroni KF-1]). The first-tier organism Parvibaculum lavamentivorans converts LAS surfactants into many sulfophenylcarboxylates (SPCs), and Delftia acidovorans SPH-1 represents a second-tier organism by completely degrading some of these SPCs; Comamonas testosteroni degrades a different set of SPCs. Contacts: David Schleheck (david.schleheck@unsw.edu.au)           Staffan Kjelleberg (s.kjelleberg@unsw.edu.au)           Alasdair Cook (alasdair.cook@uni-konstanz.de)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGFPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000884. URL -- http://www.jgi.doe.gov JGI Project ID: 4002762 Source DNA available from David Schleheck (david.schleheck@unsw.edu.au) Bacteria available from DSMZ: DSM 14801 (http://www.dsmz.de) Delftia acidovorans SPH-1 was isolated from a sewage treatment plant in Germany and is part of a defined three-member bacterial community which completely mineralises representative congeners of linear alkylbenzenesulfonate (LAS) surfactants (reference 1). The community genome was kindly established by DOE-JGI as part of the 2006 Microbes Program (see also JGI Project Id 4003071 [Parvibaculum lavamentivorans DS-1] and 4002763 [Comamonas testosteroni KF-1]). The first-tier organism Parvibaculum lavamentivorans converts LAS surfactants into many sulfophenylcarboxylates (SPCs), and Delftia acidovorans SPH-1 represents a second-tier organism by completely degrading some of these SPCs; Comamonas testosteroni degrades a different set of SPCs. Contacts: David Schleheck (david.schleheck@unsw.edu.au)           Staffan Kjelleberg (s.kjelleberg@unsw.edu.au)           Alasdair Cook (alasdair.cook@uni-konstanz.de)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGFPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000884. URL -- http://www.jgi.doe.gov JGI Project ID: 4002762 Source DNA available from David Schleheck (david.schleheck@unsw.edu.au) Bacteria available from DSMZ: DSM 14801 (http://www.dsmz.de) Delftia acidovorans SPH-1 was isolated from a sewage treatment plant in Germany and is part of a defined three-member bacterial community which completely mineralises representative congeners of linear alkylbenzenesulfonate (LAS) surfactants (reference 1). The community genome was kindly established by DOE-JGI as part of the 2006 Microbes Program (see also JGI Project Id 4003071 [Parvibaculum lavamentivorans DS-1] and 4002763 [Comamonas testosteroni KF-1]). The first-tier organism Parvibaculum lavamentivorans converts LAS surfactants into many sulfophenylcarboxylates (SPCs), and Delftia acidovorans SPH-1 represents a second-tier organism by completely degrading some of these SPCs; Comamonas testosteroni degrades a different set of SPCs. Contacts: David Schleheck (david.schleheck@unsw.edu.au)           Staffan Kjelleberg (s.kjelleberg@unsw.edu.au)           Alasdair Cook (alasdair.cook@uni-konstanz.de)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps withPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000884. URL -- http://www.jgi.doe.gov JGI Project ID: 4002762 Source DNA available from David Schleheck (david.schleheck@unsw.edu.au) Bacteria available from DSMZ: DSM 14801 (http://www.dsmz.de) Delftia acidovorans SPH-1 was isolated from a sewage treatment plant in Germany and is part of a defined three-member bacterial community which completely mineralises representative congeners of linear alkylbenzenesulfonate (LAS) surfactants (reference 1). The community genome was kindly established by DOE-JGI as part of the 2006 Microbes Program (see also JGI Project Id 4003071 [Parvibaculum lavamentivorans DS-1] and 4002763 [Comamonas testosteroni KF-1]). The first-tier organism Parvibaculum lavamentivorans converts LAS surfactants into many sulfophenylcarboxylates (SPCs), and Delftia acidovorans SPH-1 represents a second-tier organism by completely degrading some of these SPCs; Comamonas testosteroni degrades a different set of SPCs. Contacts: David Schleheck (david.schleheck@unsw.edu.au)           Staffan Kjelleberg (s.kjelleberg@unsw.edu.au)           Alasdair Cook (alasdair.cook@uni-konstanz.de)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. EachPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000884. URL -- http://www.jgi.doe.gov JGI Project ID: 4002762 Source DNA available from David Schleheck (david.schleheck@unsw.edu.au) Bacteria available from DSMZ: DSM 14801 (http://www.dsmz.de) Delftia acidovorans SPH-1 was isolated from a sewage treatment plant in Germany and is part of a defined three-member bacterial community which completely mineralises representative congeners of linear alkylbenzenesulfonate (LAS) surfactants (reference 1). The community genome was kindly established by DOE-JGI as part of the 2006 Microbes Program (see also JGI Project Id 4003071 [Parvibaculum lavamentivorans DS-1] and 4002763 [Comamonas testosteroni KF-1]). The first-tier organism Parvibaculum lavamentivorans converts LAS surfactants into many sulfophenylcarboxylates (SPCs), and Delftia acidovorans SPH-1 represents a second-tier organism by completely degrading some of these SPCs; Comamonas testosteroni degrades a different set of SPCs. Contacts: David Schleheck (david.schleheck@unsw.edu.au)           Staffan Kjelleberg (s.kjelleberg@unsw.edu.au)           Alasdair Cook (alasdair.cook@uni-konstanz.de)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total errorPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000884. URL -- http://www.jgi.doe.gov JGI Project ID: 4002762 Source DNA available from David Schleheck (david.schleheck@unsw.edu.au) Bacteria available from DSMZ: DSM 14801 (http://www.dsmz.de) Delftia acidovorans SPH-1 was isolated from a sewage treatment plant in Germany and is part of a defined three-member bacterial community which completely mineralises representative congeners of linear alkylbenzenesulfonate (LAS) surfactants (reference 1). The community genome was kindly established by DOE-JGI as part of the 2006 Microbes Program (see also JGI Project Id 4003071 [Parvibaculum lavamentivorans DS-1] and 4002763 [Comamonas testosteroni KF-1]). The first-tier organism Parvibaculum lavamentivorans converts LAS surfactants into many sulfophenylcarboxylates (SPCs), and Delftia acidovorans SPH-1 represents a second-tier organism by completely degrading some of these SPCs; Comamonas testosteroni degrades a different set of SPCs. Contacts: David Schleheck (david.schleheck@unsw.edu.au)           Staffan Kjelleberg (s.kjelleberg@unsw.edu.au)           Alasdair Cook (alasdair.cook@uni-konstanz.de)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000884. URL -- http://www.jgi.doe.gov JGI Project ID: 4002762 Source DNA available from David Schleheck (david.schleheck@unsw.edu.au) Bacteria available from DSMZ: DSM 14801 (http://www.dsmz.de) Delftia acidovorans SPH-1 was isolated from a sewage treatment plant in Germany and is part of a defined three-member bacterial community which completely mineralises representative congeners of linear alkylbenzenesulfonate (LAS) surfactants (reference 1). The community genome was kindly established by DOE-JGI as part of the 2006 Microbes Program (see also JGI Project Id 4003071 [Parvibaculum lavamentivorans DS-1] and 4002763 [Comamonas testosteroni KF-1]). The first-tier organism Parvibaculum lavamentivorans converts LAS surfactants into many sulfophenylcarboxylates (SPCs), and Delftia acidovorans SPH-1 represents a second-tier organism by completely degrading some of these SPCs; Comamonas testosteroni degrades a different set of SPCs. Contacts: David Schleheck (david.schleheck@unsw.edu.au)           Staffan Kjelleberg (s.kjelleberg@unsw.edu.au)           Alasdair Cook (alasdair.cook@uni-konstanz.de)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for thePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000884. URL -- http://www.jgi.doe.gov JGI Project ID: 4002762 Source DNA available from David Schleheck (david.schleheck@unsw.edu.au) Bacteria available from DSMZ: DSM 14801 (http://www.dsmz.de) Delftia acidovorans SPH-1 was isolated from a sewage treatment plant in Germany and is part of a defined three-member bacterial community which completely mineralises representative congeners of linear alkylbenzenesulfonate (LAS) surfactants (reference 1). The community genome was kindly established by DOE-JGI as part of the 2006 Microbes Program (see also JGI Project Id 4003071 [Parvibaculum lavamentivorans DS-1] and 4002763 [Comamonas testosteroni KF-1]). The first-tier organism Parvibaculum lavamentivorans converts LAS surfactants into many sulfophenylcarboxylates (SPCs), and Delftia acidovorans SPH-1 represents a second-tier organism by completely degrading some of these SPCs; Comamonas testosteroni degrades a different set of SPCs. Contacts: David Schleheck (david.schleheck@unsw.edu.au)           Staffan Kjelleberg (s.kjelleberg@unsw.edu.au)           Alasdair Cook (alasdair.cook@uni-konstanz.de)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by thePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000884. URL -- http://www.jgi.doe.gov JGI Project ID: 4002762 Source DNA available from David Schleheck (david.schleheck@unsw.edu.au) Bacteria available from DSMZ: DSM 14801 (http://www.dsmz.de) Delftia acidovorans SPH-1 was isolated from a sewage treatment plant in Germany and is part of a defined three-member bacterial community which completely mineralises representative congeners of linear alkylbenzenesulfonate (LAS) surfactants (reference 1). The community genome was kindly established by DOE-JGI as part of the 2006 Microbes Program (see also JGI Project Id 4003071 [Parvibaculum lavamentivorans DS-1] and 4002763 [Comamonas testosteroni KF-1]). The first-tier organism Parvibaculum lavamentivorans converts LAS surfactants into many sulfophenylcarboxylates (SPCs), and Delftia acidovorans SPH-1 represents a second-tier organism by completely degrading some of these SPCs; Comamonas testosteroni degrades a different set of SPCs. Contacts: David Schleheck (david.schleheck@unsw.edu.au)           Staffan Kjelleberg (s.kjelleberg@unsw.edu.au)           Alasdair Cook (alasdair.cook@uni-konstanz.de)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000884. URL -- http://www.jgi.doe.gov JGI Project ID: 4002762 Source DNA available from David Schleheck (david.schleheck@unsw.edu.au) Bacteria available from DSMZ: DSM 14801 (http://www.dsmz.de) Delftia acidovorans SPH-1 was isolated from a sewage treatment plant in Germany and is part of a defined three-member bacterial community which completely mineralises representative congeners of linear alkylbenzenesulfonate (LAS) surfactants (reference 1). The community genome was kindly established by DOE-JGI as part of the 2006 Microbes Program (see also JGI Project Id 4003071 [Parvibaculum lavamentivorans DS-1] and 4002763 [Comamonas testosteroni KF-1]). The first-tier organism Parvibaculum lavamentivorans converts LAS surfactants into many sulfophenylcarboxylates (SPCs), and Delftia acidovorans SPH-1 represents a second-tier organism by completely degrading some of these SPCs; Comamonas testosteroni degrades a different set of SPCs. Contacts: David Schleheck (david.schleheck@unsw.edu.au)           Staffan Kjelleberg (s.kjelleberg@unsw.edu.au)           Alasdair Cook (alasdair.cook@uni-konstanz.de)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of thisPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000884. URL -- http://www.jgi.doe.gov JGI Project ID: 4002762 Source DNA available from David Schleheck (david.schleheck@unsw.edu.au) Bacteria available from DSMZ: DSM 14801 (http://www.dsmz.de) Delftia acidovorans SPH-1 was isolated from a sewage treatment plant in Germany and is part of a defined three-member bacterial community which completely mineralises representative congeners of linear alkylbenzenesulfonate (LAS) surfactants (reference 1). The community genome was kindly established by DOE-JGI as part of the 2006 Microbes Program (see also JGI Project Id 4003071 [Parvibaculum lavamentivorans DS-1] and 4002763 [Comamonas testosteroni KF-1]). The first-tier organism Parvibaculum lavamentivorans converts LAS surfactants into many sulfophenylcarboxylates (SPCs), and Delftia acidovorans SPH-1 represents a second-tier organism by completely degrading some of these SPCs; Comamonas testosteroni degrades a different set of SPCs. Contacts: David Schleheck (david.schleheck@unsw.edu.au)           Staffan Kjelleberg (s.kjelleberg@unsw.edu.au)           Alasdair Cook (alasdair.cook@uni-konstanz.de)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborativePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000884. URL -- http://www.jgi.doe.gov JGI Project ID: 4002762 Source DNA available from David Schleheck (david.schleheck@unsw.edu.au) Bacteria available from DSMZ: DSM 14801 (http://www.dsmz.de) Delftia acidovorans SPH-1 was isolated from a sewage treatment plant in Germany and is part of a defined three-member bacterial community which completely mineralises representative congeners of linear alkylbenzenesulfonate (LAS) surfactants (reference 1). The community genome was kindly established by DOE-JGI as part of the 2006 Microbes Program (see also JGI Project Id 4003071 [Parvibaculum lavamentivorans DS-1] and 4002763 [Comamonas testosteroni KF-1]). The first-tier organism Parvibaculum lavamentivorans converts LAS surfactants into many sulfophenylcarboxylates (SPCs), and Delftia acidovorans SPH-1 represents a second-tier organism by completely degrading some of these SPCs; Comamonas testosteroni degrades a different set of SPCs. Contacts: David Schleheck (david.schleheck@unsw.edu.au)           Staffan Kjelleberg (s.kjelleberg@unsw.edu.au)           Alasdair Cook (alasdair.cook@uni-konstanz.de)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000884. URL -- http://www.jgi.doe.gov JGI Project ID: 4002762 Source DNA available from David Schleheck (david.schleheck@unsw.edu.au) Bacteria available from DSMZ: DSM 14801 (http://www.dsmz.de) Delftia acidovorans SPH-1 was isolated from a sewage treatment plant in Germany and is part of a defined three-member bacterial community which completely mineralises representative congeners of linear alkylbenzenesulfonate (LAS) surfactants (reference 1). The community genome was kindly established by DOE-JGI as part of the 2006 Microbes Program (see also JGI Project Id 4003071 [Parvibaculum lavamentivorans DS-1] and 4002763 [Comamonas testosteroni KF-1]). The first-tier organism Parvibaculum lavamentivorans converts LAS surfactants into many sulfophenylcarboxylates (SPCs), and Delftia acidovorans SPH-1 represents a second-tier organism by completely degrading some of these SPCs; Comamonas testosteroni degrades a different set of SPCs. Contacts: David Schleheck (david.schleheck@unsw.edu.au)           Staffan Kjelleberg (s.kjelleberg@unsw.edu.au)           Alasdair Cook (alasdair.cook@uni-konstanz.de)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000884. URL -- http://www.jgi.doe.gov JGI Project ID: 4002762 Source DNA available from David Schleheck (david.schleheck@unsw.edu.au) Bacteria available from DSMZ: DSM 14801 (http://www.dsmz.de) Delftia acidovorans SPH-1 was isolated from a sewage treatment plant in Germany and is part of a defined three-member bacterial community which completely mineralises representative congeners of linear alkylbenzenesulfonate (LAS) surfactants (reference 1). The community genome was kindly established by DOE-JGI as part of the 2006 Microbes Program (see also JGI Project Id 4003071 [Parvibaculum lavamentivorans DS-1] and 4002763 [Comamonas testosteroni KF-1]). The first-tier organism Parvibaculum lavamentivorans converts LAS surfactants into many sulfophenylcarboxylates (SPCs), and Delftia acidovorans SPH-1 represents a second-tier organism by completely degrading some of these SPCs; Comamonas testosteroni degrades a different set of SPCs. Contacts: David Schleheck (david.schleheck@unsw.edu.au)           Staffan Kjelleberg (s.kjelleberg@unsw.edu.au)           Alasdair Cook (alasdair.cook@uni-konstanz.de)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). COMPLETENESS: full length.