-- dump date   	20240506_002411
-- class       	Genbank::Contig
-- table       	contig_comment
-- id	comment
NC_014365.1	REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP002085.1.REFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435REFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at theREFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ)REFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de)REFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)REFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANLREFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02REFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,368REFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,368 CDSs (total)                      :: 3,314REFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,368 CDSs (total)                      :: 3,314 Genes (coding)                    :: 3,310REFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,368 CDSs (total)                      :: 3,314 Genes (coding)                    :: 3,310 CDSs (with protein)               :: 3,310REFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,368 CDSs (total)                      :: 3,314 Genes (coding)                    :: 3,310 CDSs (with protein)               :: 3,310 Genes (RNA)                       :: 54REFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,368 CDSs (total)                      :: 3,314 Genes (coding)                    :: 3,310 CDSs (with protein)               :: 3,310 Genes (RNA)                       :: 54 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,368 CDSs (total)                      :: 3,314 Genes (coding)                    :: 3,310 CDSs (with protein)               :: 3,310 Genes (RNA)                       :: 54 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,368 CDSs (total)                      :: 3,314 Genes (coding)                    :: 3,310 CDSs (with protein)               :: 3,310 Genes (RNA)                       :: 54 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 46REFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,368 CDSs (total)                      :: 3,314 Genes (coding)                    :: 3,310 CDSs (with protein)               :: 3,310 Genes (RNA)                       :: 54 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 46 ncRNAs                            :: 5REFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,368 CDSs (total)                      :: 3,314 Genes (coding)                    :: 3,310 CDSs (with protein)               :: 3,310 Genes (RNA)                       :: 54 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 46 ncRNAs                            :: 5 Pseudo Genes (total)              :: 4REFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,368 CDSs (total)                      :: 3,314 Genes (coding)                    :: 3,310 CDSs (with protein)               :: 3,310 Genes (RNA)                       :: 54 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 46 ncRNAs                            :: 5 Pseudo Genes (total)              :: 4 CDSs (without protein)            :: 4REFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,368 CDSs (total)                      :: 3,314 Genes (coding)                    :: 3,310 CDSs (with protein)               :: 3,310 Genes (RNA)                       :: 54 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 46 ncRNAs                            :: 5 Pseudo Genes (total)              :: 4 CDSs (without protein)            :: 4 Pseudo Genes (ambiguous residues) :: 0 of 4REFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,368 CDSs (total)                      :: 3,314 Genes (coding)                    :: 3,310 CDSs (with protein)               :: 3,310 Genes (RNA)                       :: 54 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 46 ncRNAs                            :: 5 Pseudo Genes (total)              :: 4 CDSs (without protein)            :: 4 Pseudo Genes (ambiguous residues) :: 0 of 4 Pseudo Genes (frameshifted)       :: 0 of 4REFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,368 CDSs (total)                      :: 3,314 Genes (coding)                    :: 3,310 CDSs (with protein)               :: 3,310 Genes (RNA)                       :: 54 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 46 ncRNAs                            :: 5 Pseudo Genes (total)              :: 4 CDSs (without protein)            :: 4 Pseudo Genes (ambiguous residues) :: 0 of 4 Pseudo Genes (frameshifted)       :: 0 of 4 Pseudo Genes (incomplete)         :: 4 of 4REFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,368 CDSs (total)                      :: 3,314 Genes (coding)                    :: 3,310 CDSs (with protein)               :: 3,310 Genes (RNA)                       :: 54 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 46 ncRNAs                            :: 5 Pseudo Genes (total)              :: 4 CDSs (without protein)            :: 4 Pseudo Genes (ambiguous residues) :: 0 of 4 Pseudo Genes (frameshifted)       :: 0 of 4 Pseudo Genes (incomplete)         :: 4 of 4 Pseudo Genes (internal stop)      :: 0 of 4REFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,368 CDSs (total)                      :: 3,314 Genes (coding)                    :: 3,310 CDSs (with protein)               :: 3,310 Genes (RNA)                       :: 54 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 46 ncRNAs                            :: 5 Pseudo Genes (total)              :: 4 CDSs (without protein)            :: 4 Pseudo Genes (ambiguous residues) :: 0 of 4 Pseudo Genes (frameshifted)       :: 0 of 4 Pseudo Genes (incomplete)         :: 4 of 4 Pseudo Genes (internal stop)      :: 0 of 4 CRISPR Arrays                     :: 3REFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,368 CDSs (total)                      :: 3,314 Genes (coding)                    :: 3,310 CDSs (with protein)               :: 3,310 Genes (RNA)                       :: 54 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 46 ncRNAs                            :: 5 Pseudo Genes (total)              :: 4 CDSs (without protein)            :: 4 Pseudo Genes (ambiguous residues) :: 0 of 4 Pseudo Genes (frameshifted)       :: 0 of 4 Pseudo Genes (incomplete)         :: 4 of 4 Pseudo Genes (internal stop)      :: 0 of 4 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,368 CDSs (total)                      :: 3,314 Genes (coding)                    :: 3,310 CDSs (with protein)               :: 3,310 Genes (RNA)                       :: 54 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 46 ncRNAs                            :: 5 Pseudo Genes (total)              :: 4 CDSs (without protein)            :: 4 Pseudo Genes (ambiguous residues) :: 0 of 4 Pseudo Genes (frameshifted)       :: 0 of 4 Pseudo Genes (incomplete)         :: 4 of 4 Pseudo Genes (internal stop)      :: 0 of 4 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START##REFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,368 CDSs (total)                      :: 3,314 Genes (coding)                    :: 3,310 CDSs (with protein)               :: 3,310 Genes (RNA)                       :: 54 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 46 ncRNAs                            :: 5 Pseudo Genes (total)              :: 4 CDSs (without protein)            :: 4 Pseudo Genes (ambiguous residues) :: 0 of 4 Pseudo Genes (frameshifted)       :: 0 of 4 Pseudo Genes (incomplete)         :: 4 of 4 Pseudo Genes (internal stop)      :: 0 of 4 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START## investigation_type    :: bacteria_archaeaREFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,368 CDSs (total)                      :: 3,314 Genes (coding)                    :: 3,310 CDSs (with protein)               :: 3,310 Genes (RNA)                       :: 54 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 46 ncRNAs                            :: 5 Pseudo Genes (total)              :: 4 CDSs (without protein)            :: 4 Pseudo Genes (ambiguous residues) :: 0 of 4 Pseudo Genes (frameshifted)       :: 0 of 4 Pseudo Genes (incomplete)         :: 4 of 4 Pseudo Genes (internal stop)      :: 0 of 4 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START## investigation_type    :: bacteria_archaea project_name          :: Desulfarculus baarsii Konstanz, DSM 2075REFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,368 CDSs (total)                      :: 3,314 Genes (coding)                    :: 3,310 CDSs (with protein)               :: 3,310 Genes (RNA)                       :: 54 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 46 ncRNAs                            :: 5 Pseudo Genes (total)              :: 4 CDSs (without protein)            :: 4 Pseudo Genes (ambiguous residues) :: 0 of 4 Pseudo Genes (frameshifted)       :: 0 of 4 Pseudo Genes (incomplete)         :: 4 of 4 Pseudo Genes (internal stop)      :: 0 of 4 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START## investigation_type    :: bacteria_archaea project_name          :: Desulfarculus baarsii Konstanz, DSM 2075 collection_date       :: N/AREFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,368 CDSs (total)                      :: 3,314 Genes (coding)                    :: 3,310 CDSs (with protein)               :: 3,310 Genes (RNA)                       :: 54 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 46 ncRNAs                            :: 5 Pseudo Genes (total)              :: 4 CDSs (without protein)            :: 4 Pseudo Genes (ambiguous residues) :: 0 of 4 Pseudo Genes (frameshifted)       :: 0 of 4 Pseudo Genes (incomplete)         :: 4 of 4 Pseudo Genes (internal stop)      :: 0 of 4 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START## investigation_type    :: bacteria_archaea project_name          :: Desulfarculus baarsii Konstanz, DSM 2075 collection_date       :: N/A depth                 :: N/AREFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,368 CDSs (total)                      :: 3,314 Genes (coding)                    :: 3,310 CDSs (with protein)               :: 3,310 Genes (RNA)                       :: 54 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 46 ncRNAs                            :: 5 Pseudo Genes (total)              :: 4 CDSs (without protein)            :: 4 Pseudo Genes (ambiguous residues) :: 0 of 4 Pseudo Genes (frameshifted)       :: 0 of 4 Pseudo Genes (incomplete)         :: 4 of 4 Pseudo Genes (internal stop)      :: 0 of 4 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START## investigation_type    :: bacteria_archaea project_name          :: Desulfarculus baarsii Konstanz, DSM 2075 collection_date       :: N/A depth                 :: N/A alt_elev              :: N/AREFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,368 CDSs (total)                      :: 3,314 Genes (coding)                    :: 3,310 CDSs (with protein)               :: 3,310 Genes (RNA)                       :: 54 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 46 ncRNAs                            :: 5 Pseudo Genes (total)              :: 4 CDSs (without protein)            :: 4 Pseudo Genes (ambiguous residues) :: 0 of 4 Pseudo Genes (frameshifted)       :: 0 of 4 Pseudo Genes (incomplete)         :: 4 of 4 Pseudo Genes (internal stop)      :: 0 of 4 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START## investigation_type    :: bacteria_archaea project_name          :: Desulfarculus baarsii Konstanz, DSM 2075 collection_date       :: N/A depth                 :: N/A alt_elev              :: N/A country               :: GermanyREFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,368 CDSs (total)                      :: 3,314 Genes (coding)                    :: 3,310 CDSs (with protein)               :: 3,310 Genes (RNA)                       :: 54 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 46 ncRNAs                            :: 5 Pseudo Genes (total)              :: 4 CDSs (without protein)            :: 4 Pseudo Genes (ambiguous residues) :: 0 of 4 Pseudo Genes (frameshifted)       :: 0 of 4 Pseudo Genes (incomplete)         :: 4 of 4 Pseudo Genes (internal stop)      :: 0 of 4 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START## investigation_type    :: bacteria_archaea project_name          :: Desulfarculus baarsii Konstanz, DSM 2075 collection_date       :: N/A depth                 :: N/A alt_elev              :: N/A country               :: Germany num_replicons         :: N/AREFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,368 CDSs (total)                      :: 3,314 Genes (coding)                    :: 3,310 CDSs (with protein)               :: 3,310 Genes (RNA)                       :: 54 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 46 ncRNAs                            :: 5 Pseudo Genes (total)              :: 4 CDSs (without protein)            :: 4 Pseudo Genes (ambiguous residues) :: 0 of 4 Pseudo Genes (frameshifted)       :: 0 of 4 Pseudo Genes (incomplete)         :: 4 of 4 Pseudo Genes (internal stop)      :: 0 of 4 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START## investigation_type    :: bacteria_archaea project_name          :: Desulfarculus baarsii Konstanz, DSM 2075 collection_date       :: N/A depth                 :: N/A alt_elev              :: N/A country               :: Germany num_replicons         :: N/A ref_biomaterial       :: N/AREFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,368 CDSs (total)                      :: 3,314 Genes (coding)                    :: 3,310 CDSs (with protein)               :: 3,310 Genes (RNA)                       :: 54 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 46 ncRNAs                            :: 5 Pseudo Genes (total)              :: 4 CDSs (without protein)            :: 4 Pseudo Genes (ambiguous residues) :: 0 of 4 Pseudo Genes (frameshifted)       :: 0 of 4 Pseudo Genes (incomplete)         :: 4 of 4 Pseudo Genes (internal stop)      :: 0 of 4 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START## investigation_type    :: bacteria_archaea project_name          :: Desulfarculus baarsii Konstanz, DSM 2075 collection_date       :: N/A depth                 :: N/A alt_elev              :: N/A country               :: Germany num_replicons         :: N/A ref_biomaterial       :: N/A biotic_relationship   :: Free livingREFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,368 CDSs (total)                      :: 3,314 Genes (coding)                    :: 3,310 CDSs (with protein)               :: 3,310 Genes (RNA)                       :: 54 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 46 ncRNAs                            :: 5 Pseudo Genes (total)              :: 4 CDSs (without protein)            :: 4 Pseudo Genes (ambiguous residues) :: 0 of 4 Pseudo Genes (frameshifted)       :: 0 of 4 Pseudo Genes (incomplete)         :: 4 of 4 Pseudo Genes (internal stop)      :: 0 of 4 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START## investigation_type    :: bacteria_archaea project_name          :: Desulfarculus baarsii Konstanz, DSM 2075 collection_date       :: N/A depth                 :: N/A alt_elev              :: N/A country               :: Germany num_replicons         :: N/A ref_biomaterial       :: N/A biotic_relationship   :: Free living rel_to_oxygen         :: AnaerobeREFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,368 CDSs (total)                      :: 3,314 Genes (coding)                    :: 3,310 CDSs (with protein)               :: 3,310 Genes (RNA)                       :: 54 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 46 ncRNAs                            :: 5 Pseudo Genes (total)              :: 4 CDSs (without protein)            :: 4 Pseudo Genes (ambiguous residues) :: 0 of 4 Pseudo Genes (frameshifted)       :: 0 of 4 Pseudo Genes (incomplete)         :: 4 of 4 Pseudo Genes (internal stop)      :: 0 of 4 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START## investigation_type    :: bacteria_archaea project_name          :: Desulfarculus baarsii Konstanz, DSM 2075 collection_date       :: N/A depth                 :: N/A alt_elev              :: N/A country               :: Germany num_replicons         :: N/A ref_biomaterial       :: N/A biotic_relationship   :: Free living rel_to_oxygen         :: Anaerobe assembly              :: N/AREFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,368 CDSs (total)                      :: 3,314 Genes (coding)                    :: 3,310 CDSs (with protein)               :: 3,310 Genes (RNA)                       :: 54 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 46 ncRNAs                            :: 5 Pseudo Genes (total)              :: 4 CDSs (without protein)            :: 4 Pseudo Genes (ambiguous residues) :: 0 of 4 Pseudo Genes (frameshifted)       :: 0 of 4 Pseudo Genes (incomplete)         :: 4 of 4 Pseudo Genes (internal stop)      :: 0 of 4 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START## investigation_type    :: bacteria_archaea project_name          :: Desulfarculus baarsii Konstanz, DSM 2075 collection_date       :: N/A depth                 :: N/A alt_elev              :: N/A country               :: Germany num_replicons         :: N/A ref_biomaterial       :: N/A biotic_relationship   :: Free living rel_to_oxygen         :: Anaerobe assembly              :: N/A finishing_strategy    :: Level 6: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,368 CDSs (total)                      :: 3,314 Genes (coding)                    :: 3,310 CDSs (with protein)               :: 3,310 Genes (RNA)                       :: 54 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 46 ncRNAs                            :: 5 Pseudo Genes (total)              :: 4 CDSs (without protein)            :: 4 Pseudo Genes (ambiguous residues) :: 0 of 4 Pseudo Genes (frameshifted)       :: 0 of 4 Pseudo Genes (incomplete)         :: 4 of 4 Pseudo Genes (internal stop)      :: 0 of 4 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START## investigation_type    :: bacteria_archaea project_name          :: Desulfarculus baarsii Konstanz, DSM 2075 collection_date       :: N/A depth                 :: N/A alt_elev              :: N/A country               :: Germany num_replicons         :: N/A ref_biomaterial       :: N/A biotic_relationship   :: Free living rel_to_oxygen         :: Anaerobe assembly              :: N/A finishing_strategy    :: Level 6: Finished lat_lon               :: N/AREFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,368 CDSs (total)                      :: 3,314 Genes (coding)                    :: 3,310 CDSs (with protein)               :: 3,310 Genes (RNA)                       :: 54 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 46 ncRNAs                            :: 5 Pseudo Genes (total)              :: 4 CDSs (without protein)            :: 4 Pseudo Genes (ambiguous residues) :: 0 of 4 Pseudo Genes (frameshifted)       :: 0 of 4 Pseudo Genes (incomplete)         :: 4 of 4 Pseudo Genes (internal stop)      :: 0 of 4 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START## investigation_type    :: bacteria_archaea project_name          :: Desulfarculus baarsii Konstanz, DSM 2075 collection_date       :: N/A depth                 :: N/A alt_elev              :: N/A country               :: Germany num_replicons         :: N/A ref_biomaterial       :: N/A biotic_relationship   :: Free living rel_to_oxygen         :: Anaerobe assembly              :: N/A finishing_strategy    :: Level 6: Finished lat_lon               :: N/A trophic_level         :: N/AREFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,368 CDSs (total)                      :: 3,314 Genes (coding)                    :: 3,310 CDSs (with protein)               :: 3,310 Genes (RNA)                       :: 54 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 46 ncRNAs                            :: 5 Pseudo Genes (total)              :: 4 CDSs (without protein)            :: 4 Pseudo Genes (ambiguous residues) :: 0 of 4 Pseudo Genes (frameshifted)       :: 0 of 4 Pseudo Genes (incomplete)         :: 4 of 4 Pseudo Genes (internal stop)      :: 0 of 4 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START## investigation_type    :: bacteria_archaea project_name          :: Desulfarculus baarsii Konstanz, DSM 2075 collection_date       :: N/A depth                 :: N/A alt_elev              :: N/A country               :: Germany num_replicons         :: N/A ref_biomaterial       :: N/A biotic_relationship   :: Free living rel_to_oxygen         :: Anaerobe assembly              :: N/A finishing_strategy    :: Level 6: Finished lat_lon               :: N/A trophic_level         :: N/A environment           :: MudREFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,368 CDSs (total)                      :: 3,314 Genes (coding)                    :: 3,310 CDSs (with protein)               :: 3,310 Genes (RNA)                       :: 54 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 46 ncRNAs                            :: 5 Pseudo Genes (total)              :: 4 CDSs (without protein)            :: 4 Pseudo Genes (ambiguous residues) :: 0 of 4 Pseudo Genes (frameshifted)       :: 0 of 4 Pseudo Genes (incomplete)         :: 4 of 4 Pseudo Genes (internal stop)      :: 0 of 4 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START## investigation_type    :: bacteria_archaea project_name          :: Desulfarculus baarsii Konstanz, DSM 2075 collection_date       :: N/A depth                 :: N/A alt_elev              :: N/A country               :: Germany num_replicons         :: N/A ref_biomaterial       :: N/A biotic_relationship   :: Free living rel_to_oxygen         :: Anaerobe assembly              :: N/A finishing_strategy    :: Level 6: Finished lat_lon               :: N/A trophic_level         :: N/A environment           :: Mud sequencing_meth       :: 454, SangerREFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,368 CDSs (total)                      :: 3,314 Genes (coding)                    :: 3,310 CDSs (with protein)               :: 3,310 Genes (RNA)                       :: 54 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 46 ncRNAs                            :: 5 Pseudo Genes (total)              :: 4 CDSs (without protein)            :: 4 Pseudo Genes (ambiguous residues) :: 0 of 4 Pseudo Genes (frameshifted)       :: 0 of 4 Pseudo Genes (incomplete)         :: 4 of 4 Pseudo Genes (internal stop)      :: 0 of 4 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START## investigation_type    :: bacteria_archaea project_name          :: Desulfarculus baarsii Konstanz, DSM 2075 collection_date       :: N/A depth                 :: N/A alt_elev              :: N/A country               :: Germany num_replicons         :: N/A ref_biomaterial       :: N/A biotic_relationship   :: Free living rel_to_oxygen         :: Anaerobe assembly              :: N/A finishing_strategy    :: Level 6: Finished lat_lon               :: N/A trophic_level         :: N/A environment           :: Mud sequencing_meth       :: 454, Sanger isol_growth_condt     :: N/AREFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,368 CDSs (total)                      :: 3,314 Genes (coding)                    :: 3,310 CDSs (with protein)               :: 3,310 Genes (RNA)                       :: 54 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 46 ncRNAs                            :: 5 Pseudo Genes (total)              :: 4 CDSs (without protein)            :: 4 Pseudo Genes (ambiguous residues) :: 0 of 4 Pseudo Genes (frameshifted)       :: 0 of 4 Pseudo Genes (incomplete)         :: 4 of 4 Pseudo Genes (internal stop)      :: 0 of 4 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START## investigation_type    :: bacteria_archaea project_name          :: Desulfarculus baarsii Konstanz, DSM 2075 collection_date       :: N/A depth                 :: N/A alt_elev              :: N/A country               :: Germany num_replicons         :: N/A ref_biomaterial       :: N/A biotic_relationship   :: Free living rel_to_oxygen         :: Anaerobe assembly              :: N/A finishing_strategy    :: Level 6: Finished lat_lon               :: N/A trophic_level         :: N/A environment           :: Mud sequencing_meth       :: 454, Sanger isol_growth_condt     :: N/A GOLD Stamp ID         :: Gi03014REFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,368 CDSs (total)                      :: 3,314 Genes (coding)                    :: 3,310 CDSs (with protein)               :: 3,310 Genes (RNA)                       :: 54 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 46 ncRNAs                            :: 5 Pseudo Genes (total)              :: 4 CDSs (without protein)            :: 4 Pseudo Genes (ambiguous residues) :: 0 of 4 Pseudo Genes (frameshifted)       :: 0 of 4 Pseudo Genes (incomplete)         :: 4 of 4 Pseudo Genes (internal stop)      :: 0 of 4 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START## investigation_type    :: bacteria_archaea project_name          :: Desulfarculus baarsii Konstanz, DSM 2075 collection_date       :: N/A depth                 :: N/A alt_elev              :: N/A country               :: Germany num_replicons         :: N/A ref_biomaterial       :: N/A biotic_relationship   :: Free living rel_to_oxygen         :: Anaerobe assembly              :: N/A finishing_strategy    :: Level 6: Finished lat_lon               :: N/A trophic_level         :: N/A environment           :: Mud sequencing_meth       :: 454, Sanger isol_growth_condt     :: N/A GOLD Stamp ID         :: Gi03014 Culture Collection ID :: DSM 2075, ATCC 33931, VKM B-1802REFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,368 CDSs (total)                      :: 3,314 Genes (coding)                    :: 3,310 CDSs (with protein)               :: 3,310 Genes (RNA)                       :: 54 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 46 ncRNAs                            :: 5 Pseudo Genes (total)              :: 4 CDSs (without protein)            :: 4 Pseudo Genes (ambiguous residues) :: 0 of 4 Pseudo Genes (frameshifted)       :: 0 of 4 Pseudo Genes (incomplete)         :: 4 of 4 Pseudo Genes (internal stop)      :: 0 of 4 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START## investigation_type    :: bacteria_archaea project_name          :: Desulfarculus baarsii Konstanz, DSM 2075 collection_date       :: N/A depth                 :: N/A alt_elev              :: N/A country               :: Germany num_replicons         :: N/A ref_biomaterial       :: N/A biotic_relationship   :: Free living rel_to_oxygen         :: Anaerobe assembly              :: N/A finishing_strategy    :: Level 6: Finished lat_lon               :: N/A trophic_level         :: N/A environment           :: Mud sequencing_meth       :: 454, Sanger isol_growth_condt     :: N/A GOLD Stamp ID         :: Gi03014 Culture Collection ID :: DSM 2075, ATCC 33931, VKM B-1802 Type Strain           :: YesREFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,368 CDSs (total)                      :: 3,314 Genes (coding)                    :: 3,310 CDSs (with protein)               :: 3,310 Genes (RNA)                       :: 54 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 46 ncRNAs                            :: 5 Pseudo Genes (total)              :: 4 CDSs (without protein)            :: 4 Pseudo Genes (ambiguous residues) :: 0 of 4 Pseudo Genes (frameshifted)       :: 0 of 4 Pseudo Genes (incomplete)         :: 4 of 4 Pseudo Genes (internal stop)      :: 0 of 4 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START## investigation_type    :: bacteria_archaea project_name          :: Desulfarculus baarsii Konstanz, DSM 2075 collection_date       :: N/A depth                 :: N/A alt_elev              :: N/A country               :: Germany num_replicons         :: N/A ref_biomaterial       :: N/A biotic_relationship   :: Free living rel_to_oxygen         :: Anaerobe assembly              :: N/A finishing_strategy    :: Level 6: Finished lat_lon               :: N/A trophic_level         :: N/A environment           :: Mud sequencing_meth       :: 454, Sanger isol_growth_condt     :: N/A GOLD Stamp ID         :: Gi03014 Culture Collection ID :: DSM 2075, ATCC 33931, VKM B-1802 Type Strain           :: Yes Funding Program       :: DOE-GEBA 2007REFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,368 CDSs (total)                      :: 3,314 Genes (coding)                    :: 3,310 CDSs (with protein)               :: 3,310 Genes (RNA)                       :: 54 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 46 ncRNAs                            :: 5 Pseudo Genes (total)              :: 4 CDSs (without protein)            :: 4 Pseudo Genes (ambiguous residues) :: 0 of 4 Pseudo Genes (frameshifted)       :: 0 of 4 Pseudo Genes (incomplete)         :: 4 of 4 Pseudo Genes (internal stop)      :: 0 of 4 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START## investigation_type    :: bacteria_archaea project_name          :: Desulfarculus baarsii Konstanz, DSM 2075 collection_date       :: N/A depth                 :: N/A alt_elev              :: N/A country               :: Germany num_replicons         :: N/A ref_biomaterial       :: N/A biotic_relationship   :: Free living rel_to_oxygen         :: Anaerobe assembly              :: N/A finishing_strategy    :: Level 6: Finished lat_lon               :: N/A trophic_level         :: N/A environment           :: Mud sequencing_meth       :: 454, Sanger isol_growth_condt     :: N/A GOLD Stamp ID         :: Gi03014 Culture Collection ID :: DSM 2075, ATCC 33931, VKM B-1802 Type Strain           :: Yes Funding Program       :: DOE-GEBA 2007 Isolation Site        :: Ditch mud; GermanyREFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,368 CDSs (total)                      :: 3,314 Genes (coding)                    :: 3,310 CDSs (with protein)               :: 3,310 Genes (RNA)                       :: 54 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 46 ncRNAs                            :: 5 Pseudo Genes (total)              :: 4 CDSs (without protein)            :: 4 Pseudo Genes (ambiguous residues) :: 0 of 4 Pseudo Genes (frameshifted)       :: 0 of 4 Pseudo Genes (incomplete)         :: 4 of 4 Pseudo Genes (internal stop)      :: 0 of 4 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START## investigation_type    :: bacteria_archaea project_name          :: Desulfarculus baarsii Konstanz, DSM 2075 collection_date       :: N/A depth                 :: N/A alt_elev              :: N/A country               :: Germany num_replicons         :: N/A ref_biomaterial       :: N/A biotic_relationship   :: Free living rel_to_oxygen         :: Anaerobe assembly              :: N/A finishing_strategy    :: Level 6: Finished lat_lon               :: N/A trophic_level         :: N/A environment           :: Mud sequencing_meth       :: 454, Sanger isol_growth_condt     :: N/A GOLD Stamp ID         :: Gi03014 Culture Collection ID :: DSM 2075, ATCC 33931, VKM B-1802 Type Strain           :: Yes Funding Program       :: DOE-GEBA 2007 Isolation Site        :: Ditch mud; Germany rel_to_oxygen         :: AnaerobeREFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,368 CDSs (total)                      :: 3,314 Genes (coding)                    :: 3,310 CDSs (with protein)               :: 3,310 Genes (RNA)                       :: 54 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 46 ncRNAs                            :: 5 Pseudo Genes (total)              :: 4 CDSs (without protein)            :: 4 Pseudo Genes (ambiguous residues) :: 0 of 4 Pseudo Genes (frameshifted)       :: 0 of 4 Pseudo Genes (incomplete)         :: 4 of 4 Pseudo Genes (internal stop)      :: 0 of 4 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START## investigation_type    :: bacteria_archaea project_name          :: Desulfarculus baarsii Konstanz, DSM 2075 collection_date       :: N/A depth                 :: N/A alt_elev              :: N/A country               :: Germany num_replicons         :: N/A ref_biomaterial       :: N/A biotic_relationship   :: Free living rel_to_oxygen         :: Anaerobe assembly              :: N/A finishing_strategy    :: Level 6: Finished lat_lon               :: N/A trophic_level         :: N/A environment           :: Mud sequencing_meth       :: 454, Sanger isol_growth_condt     :: N/A GOLD Stamp ID         :: Gi03014 Culture Collection ID :: DSM 2075, ATCC 33931, VKM B-1802 Type Strain           :: Yes Funding Program       :: DOE-GEBA 2007 Isolation Site        :: Ditch mud; Germany rel_to_oxygen         :: Anaerobe Temperature Range     :: MesophileREFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,368 CDSs (total)                      :: 3,314 Genes (coding)                    :: 3,310 CDSs (with protein)               :: 3,310 Genes (RNA)                       :: 54 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 46 ncRNAs                            :: 5 Pseudo Genes (total)              :: 4 CDSs (without protein)            :: 4 Pseudo Genes (ambiguous residues) :: 0 of 4 Pseudo Genes (frameshifted)       :: 0 of 4 Pseudo Genes (incomplete)         :: 4 of 4 Pseudo Genes (internal stop)      :: 0 of 4 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START## investigation_type    :: bacteria_archaea project_name          :: Desulfarculus baarsii Konstanz, DSM 2075 collection_date       :: N/A depth                 :: N/A alt_elev              :: N/A country               :: Germany num_replicons         :: N/A ref_biomaterial       :: N/A biotic_relationship   :: Free living rel_to_oxygen         :: Anaerobe assembly              :: N/A finishing_strategy    :: Level 6: Finished lat_lon               :: N/A trophic_level         :: N/A environment           :: Mud sequencing_meth       :: 454, Sanger isol_growth_condt     :: N/A GOLD Stamp ID         :: Gi03014 Culture Collection ID :: DSM 2075, ATCC 33931, VKM B-1802 Type Strain           :: Yes Funding Program       :: DOE-GEBA 2007 Isolation Site        :: Ditch mud; Germany rel_to_oxygen         :: Anaerobe Temperature Range     :: Mesophile Gram Staining         :: gram-REFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,368 CDSs (total)                      :: 3,314 Genes (coding)                    :: 3,310 CDSs (with protein)               :: 3,310 Genes (RNA)                       :: 54 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 46 ncRNAs                            :: 5 Pseudo Genes (total)              :: 4 CDSs (without protein)            :: 4 Pseudo Genes (ambiguous residues) :: 0 of 4 Pseudo Genes (frameshifted)       :: 0 of 4 Pseudo Genes (incomplete)         :: 4 of 4 Pseudo Genes (internal stop)      :: 0 of 4 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START## investigation_type    :: bacteria_archaea project_name          :: Desulfarculus baarsii Konstanz, DSM 2075 collection_date       :: N/A depth                 :: N/A alt_elev              :: N/A country               :: Germany num_replicons         :: N/A ref_biomaterial       :: N/A biotic_relationship   :: Free living rel_to_oxygen         :: Anaerobe assembly              :: N/A finishing_strategy    :: Level 6: Finished lat_lon               :: N/A trophic_level         :: N/A environment           :: Mud sequencing_meth       :: 454, Sanger isol_growth_condt     :: N/A GOLD Stamp ID         :: Gi03014 Culture Collection ID :: DSM 2075, ATCC 33931, VKM B-1802 Type Strain           :: Yes Funding Program       :: DOE-GEBA 2007 Isolation Site        :: Ditch mud; Germany rel_to_oxygen         :: Anaerobe Temperature Range     :: Mesophile Gram Staining         :: gram- ##Metadata-END##REFSEQ INFORMATION: The reference sequence is identical to CP002085.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086435 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 12/24/2023 09:38:02 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,368 CDSs (total)                      :: 3,314 Genes (coding)                    :: 3,310 CDSs (with protein)               :: 3,310 Genes (RNA)                       :: 54 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 46 ncRNAs                            :: 5 Pseudo Genes (total)              :: 4 CDSs (without protein)            :: 4 Pseudo Genes (ambiguous residues) :: 0 of 4 Pseudo Genes (frameshifted)       :: 0 of 4 Pseudo Genes (incomplete)         :: 4 of 4 Pseudo Genes (internal stop)      :: 0 of 4 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START## investigation_type    :: bacteria_archaea project_name          :: Desulfarculus baarsii Konstanz, DSM 2075 collection_date       :: N/A depth                 :: N/A alt_elev              :: N/A country               :: Germany num_replicons         :: N/A ref_biomaterial       :: N/A biotic_relationship   :: Free living rel_to_oxygen         :: Anaerobe assembly              :: N/A finishing_strategy    :: Level 6: Finished lat_lon               :: N/A trophic_level         :: N/A environment           :: Mud sequencing_meth       :: 454, Sanger isol_growth_condt     :: N/A GOLD Stamp ID         :: Gi03014 Culture Collection ID :: DSM 2075, ATCC 33931, VKM B-1802 Type Strain           :: Yes Funding Program       :: DOE-GEBA 2007 Isolation Site        :: Ditch mud; Germany rel_to_oxygen         :: Anaerobe Temperature Range     :: Mesophile Gram Staining         :: gram- ##Metadata-END## COMPLETENESS: full length.