-- dump date   	20250216_235030
-- class       	Genbank::Contig
-- table       	contig_comment
-- id	comment
NC_011768.1	REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP001322.1.REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris WawrikREFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com)REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANLREFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps withREFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. EachREFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total errorREFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000.REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivoransREFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019.REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START##REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1 Current Name        :: Desulfatibacillum aliphaticivoransREFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1 Current Name        :: Desulfatibacillum aliphaticivorans Previous Name       :: Desulfatibacillum alkenivorans AK-01REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1 Current Name        :: Desulfatibacillum aliphaticivorans Previous Name       :: Desulfatibacillum alkenivorans AK-01 Date Updated        :: 2019-04-22REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1 Current Name        :: Desulfatibacillum aliphaticivorans Previous Name       :: Desulfatibacillum alkenivorans AK-01 Date Updated        :: 2019-04-22 Analysis Type       :: Average Nucleotide Identity (ANI)REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1 Current Name        :: Desulfatibacillum aliphaticivorans Previous Name       :: Desulfatibacillum alkenivorans AK-01 Date Updated        :: 2019-04-22 Analysis Type       :: Average Nucleotide Identity (ANI) Analysis 1 (A1)     :: Query vs. TYPE genome for current nameREFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1 Current Name        :: Desulfatibacillum aliphaticivorans Previous Name       :: Desulfatibacillum alkenivorans AK-01 Date Updated        :: 2019-04-22 Analysis Type       :: Average Nucleotide Identity (ANI) Analysis 1 (A1)     :: Query vs. TYPE genome for current name A1 Genome (subject) :: GCA_000429905.1REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1 Current Name        :: Desulfatibacillum aliphaticivorans Previous Name       :: Desulfatibacillum alkenivorans AK-01 Date Updated        :: 2019-04-22 Analysis Type       :: Average Nucleotide Identity (ANI) Analysis 1 (A1)     :: Query vs. TYPE genome for current name A1 Genome (subject) :: GCA_000429905.1 A1 Name             :: Desulfatibacillum aliphaticivoransREFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1 Current Name        :: Desulfatibacillum aliphaticivorans Previous Name       :: Desulfatibacillum alkenivorans AK-01 Date Updated        :: 2019-04-22 Analysis Type       :: Average Nucleotide Identity (ANI) Analysis 1 (A1)     :: Query vs. TYPE genome for current name A1 Genome (subject) :: GCA_000429905.1 A1 Name             :: Desulfatibacillum aliphaticivorans A1 ANI              :: 97.50372%REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1 Current Name        :: Desulfatibacillum aliphaticivorans Previous Name       :: Desulfatibacillum alkenivorans AK-01 Date Updated        :: 2019-04-22 Analysis Type       :: Average Nucleotide Identity (ANI) Analysis 1 (A1)     :: Query vs. TYPE genome for current name A1 Genome (subject) :: GCA_000429905.1 A1 Name             :: Desulfatibacillum aliphaticivorans A1 ANI              :: 97.50372% A1 Query Coverage   :: 86.42%REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1 Current Name        :: Desulfatibacillum aliphaticivorans Previous Name       :: Desulfatibacillum alkenivorans AK-01 Date Updated        :: 2019-04-22 Analysis Type       :: Average Nucleotide Identity (ANI) Analysis 1 (A1)     :: Query vs. TYPE genome for current name A1 Genome (subject) :: GCA_000429905.1 A1 Name             :: Desulfatibacillum aliphaticivorans A1 ANI              :: 97.50372% A1 Query Coverage   :: 86.42% A1 Subject Coverage :: 87.09%REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1 Current Name        :: Desulfatibacillum aliphaticivorans Previous Name       :: Desulfatibacillum alkenivorans AK-01 Date Updated        :: 2019-04-22 Analysis Type       :: Average Nucleotide Identity (ANI) Analysis 1 (A1)     :: Query vs. TYPE genome for current name A1 Genome (subject) :: GCA_000429905.1 A1 Name             :: Desulfatibacillum aliphaticivorans A1 ANI              :: 97.50372% A1 Query Coverage   :: 86.42% A1 Subject Coverage :: 87.09% Analysis 2 (A2)     :: Query vs. TYPE genome for previous nameREFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1 Current Name        :: Desulfatibacillum aliphaticivorans Previous Name       :: Desulfatibacillum alkenivorans AK-01 Date Updated        :: 2019-04-22 Analysis Type       :: Average Nucleotide Identity (ANI) Analysis 1 (A1)     :: Query vs. TYPE genome for current name A1 Genome (subject) :: GCA_000429905.1 A1 Name             :: Desulfatibacillum aliphaticivorans A1 ANI              :: 97.50372% A1 Query Coverage   :: 86.42% A1 Subject Coverage :: 87.09% Analysis 2 (A2)     :: Query vs. TYPE genome for previous name A2 Genome (subject) :: GCA_900142135.1REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1 Current Name        :: Desulfatibacillum aliphaticivorans Previous Name       :: Desulfatibacillum alkenivorans AK-01 Date Updated        :: 2019-04-22 Analysis Type       :: Average Nucleotide Identity (ANI) Analysis 1 (A1)     :: Query vs. TYPE genome for current name A1 Genome (subject) :: GCA_000429905.1 A1 Name             :: Desulfatibacillum aliphaticivorans A1 ANI              :: 97.50372% A1 Query Coverage   :: 86.42% A1 Subject Coverage :: 87.09% Analysis 2 (A2)     :: Query vs. TYPE genome for previous name A2 Genome (subject) :: GCA_900142135.1 A2 Name             :: Desulfatibacillum alkenivorans AK-01REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1 Current Name        :: Desulfatibacillum aliphaticivorans Previous Name       :: Desulfatibacillum alkenivorans AK-01 Date Updated        :: 2019-04-22 Analysis Type       :: Average Nucleotide Identity (ANI) Analysis 1 (A1)     :: Query vs. TYPE genome for current name A1 Genome (subject) :: GCA_000429905.1 A1 Name             :: Desulfatibacillum aliphaticivorans A1 ANI              :: 97.50372% A1 Query Coverage   :: 86.42% A1 Subject Coverage :: 87.09% Analysis 2 (A2)     :: Query vs. TYPE genome for previous name A2 Genome (subject) :: GCA_900142135.1 A2 Name             :: Desulfatibacillum alkenivorans AK-01 A2 ANI              :: 92.85495%REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1 Current Name        :: Desulfatibacillum aliphaticivorans Previous Name       :: Desulfatibacillum alkenivorans AK-01 Date Updated        :: 2019-04-22 Analysis Type       :: Average Nucleotide Identity (ANI) Analysis 1 (A1)     :: Query vs. TYPE genome for current name A1 Genome (subject) :: GCA_000429905.1 A1 Name             :: Desulfatibacillum aliphaticivorans A1 ANI              :: 97.50372% A1 Query Coverage   :: 86.42% A1 Subject Coverage :: 87.09% Analysis 2 (A2)     :: Query vs. TYPE genome for previous name A2 Genome (subject) :: GCA_900142135.1 A2 Name             :: Desulfatibacillum alkenivorans AK-01 A2 ANI              :: 92.85495% A2 Query Coverage   :: 81.84%REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1 Current Name        :: Desulfatibacillum aliphaticivorans Previous Name       :: Desulfatibacillum alkenivorans AK-01 Date Updated        :: 2019-04-22 Analysis Type       :: Average Nucleotide Identity (ANI) Analysis 1 (A1)     :: Query vs. TYPE genome for current name A1 Genome (subject) :: GCA_000429905.1 A1 Name             :: Desulfatibacillum aliphaticivorans A1 ANI              :: 97.50372% A1 Query Coverage   :: 86.42% A1 Subject Coverage :: 87.09% Analysis 2 (A2)     :: Query vs. TYPE genome for previous name A2 Genome (subject) :: GCA_900142135.1 A2 Name             :: Desulfatibacillum alkenivorans AK-01 A2 ANI              :: 92.85495% A2 Query Coverage   :: 81.84% A2 Subject Coverage :: 82.5%REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1 Current Name        :: Desulfatibacillum aliphaticivorans Previous Name       :: Desulfatibacillum alkenivorans AK-01 Date Updated        :: 2019-04-22 Analysis Type       :: Average Nucleotide Identity (ANI) Analysis 1 (A1)     :: Query vs. TYPE genome for current name A1 Genome (subject) :: GCA_000429905.1 A1 Name             :: Desulfatibacillum aliphaticivorans A1 ANI              :: 97.50372% A1 Query Coverage   :: 86.42% A1 Subject Coverage :: 87.09% Analysis 2 (A2)     :: Query vs. TYPE genome for previous name A2 Genome (subject) :: GCA_900142135.1 A2 Name             :: Desulfatibacillum alkenivorans AK-01 A2 ANI              :: 92.85495% A2 Query Coverage   :: 81.84% A2 Subject Coverage :: 82.5% ##Taxonomic-Update-Statistics-END##REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1 Current Name        :: Desulfatibacillum aliphaticivorans Previous Name       :: Desulfatibacillum alkenivorans AK-01 Date Updated        :: 2019-04-22 Analysis Type       :: Average Nucleotide Identity (ANI) Analysis 1 (A1)     :: Query vs. TYPE genome for current name A1 Genome (subject) :: GCA_000429905.1 A1 Name             :: Desulfatibacillum aliphaticivorans A1 ANI              :: 97.50372% A1 Query Coverage   :: 86.42% A1 Subject Coverage :: 87.09% Analysis 2 (A2)     :: Query vs. TYPE genome for previous name A2 Genome (subject) :: GCA_900142135.1 A2 Name             :: Desulfatibacillum alkenivorans AK-01 A2 ANI              :: 92.85495% A2 Query Coverage   :: 81.84% A2 Subject Coverage :: 82.5% ##Taxonomic-Update-Statistics-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1 Current Name        :: Desulfatibacillum aliphaticivorans Previous Name       :: Desulfatibacillum alkenivorans AK-01 Date Updated        :: 2019-04-22 Analysis Type       :: Average Nucleotide Identity (ANI) Analysis 1 (A1)     :: Query vs. TYPE genome for current name A1 Genome (subject) :: GCA_000429905.1 A1 Name             :: Desulfatibacillum aliphaticivorans A1 ANI              :: 97.50372% A1 Query Coverage   :: 86.42% A1 Subject Coverage :: 87.09% Analysis 2 (A2)     :: Query vs. TYPE genome for previous name A2 Genome (subject) :: GCA_900142135.1 A2 Name             :: Desulfatibacillum alkenivorans AK-01 A2 ANI              :: 92.85495% A2 Query Coverage   :: 81.84% A2 Subject Coverage :: 82.5% ##Taxonomic-Update-Statistics-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1 Current Name        :: Desulfatibacillum aliphaticivorans Previous Name       :: Desulfatibacillum alkenivorans AK-01 Date Updated        :: 2019-04-22 Analysis Type       :: Average Nucleotide Identity (ANI) Analysis 1 (A1)     :: Query vs. TYPE genome for current name A1 Genome (subject) :: GCA_000429905.1 A1 Name             :: Desulfatibacillum aliphaticivorans A1 ANI              :: 97.50372% A1 Query Coverage   :: 86.42% A1 Subject Coverage :: 87.09% Analysis 2 (A2)     :: Query vs. TYPE genome for previous name A2 Genome (subject) :: GCA_900142135.1 A2 Name             :: Desulfatibacillum alkenivorans AK-01 A2 ANI              :: 92.85495% A2 Query Coverage   :: 81.84% A2 Subject Coverage :: 82.5% ##Taxonomic-Update-Statistics-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000021905.1-RS_2024_11_20REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1 Current Name        :: Desulfatibacillum aliphaticivorans Previous Name       :: Desulfatibacillum alkenivorans AK-01 Date Updated        :: 2019-04-22 Analysis Type       :: Average Nucleotide Identity (ANI) Analysis 1 (A1)     :: Query vs. TYPE genome for current name A1 Genome (subject) :: GCA_000429905.1 A1 Name             :: Desulfatibacillum aliphaticivorans A1 ANI              :: 97.50372% A1 Query Coverage   :: 86.42% A1 Subject Coverage :: 87.09% Analysis 2 (A2)     :: Query vs. TYPE genome for previous name A2 Genome (subject) :: GCA_900142135.1 A2 Name             :: Desulfatibacillum alkenivorans AK-01 A2 ANI              :: 92.85495% A2 Query Coverage   :: 81.84% A2 Subject Coverage :: 82.5% ##Taxonomic-Update-Statistics-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000021905.1-RS_2024_11_20 Annotation Date                   :: 11/20/2024 07:01:43REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1 Current Name        :: Desulfatibacillum aliphaticivorans Previous Name       :: Desulfatibacillum alkenivorans AK-01 Date Updated        :: 2019-04-22 Analysis Type       :: Average Nucleotide Identity (ANI) Analysis 1 (A1)     :: Query vs. TYPE genome for current name A1 Genome (subject) :: GCA_000429905.1 A1 Name             :: Desulfatibacillum aliphaticivorans A1 ANI              :: 97.50372% A1 Query Coverage   :: 86.42% A1 Subject Coverage :: 87.09% Analysis 2 (A2)     :: Query vs. TYPE genome for previous name A2 Genome (subject) :: GCA_900142135.1 A2 Name             :: Desulfatibacillum alkenivorans AK-01 A2 ANI              :: 92.85495% A2 Query Coverage   :: 81.84% A2 Subject Coverage :: 82.5% ##Taxonomic-Update-Statistics-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000021905.1-RS_2024_11_20 Annotation Date                   :: 11/20/2024 07:01:43 Annotation Pipeline               :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1 Current Name        :: Desulfatibacillum aliphaticivorans Previous Name       :: Desulfatibacillum alkenivorans AK-01 Date Updated        :: 2019-04-22 Analysis Type       :: Average Nucleotide Identity (ANI) Analysis 1 (A1)     :: Query vs. TYPE genome for current name A1 Genome (subject) :: GCA_000429905.1 A1 Name             :: Desulfatibacillum aliphaticivorans A1 ANI              :: 97.50372% A1 Query Coverage   :: 86.42% A1 Subject Coverage :: 87.09% Analysis 2 (A2)     :: Query vs. TYPE genome for previous name A2 Genome (subject) :: GCA_900142135.1 A2 Name             :: Desulfatibacillum alkenivorans AK-01 A2 ANI              :: 92.85495% A2 Query Coverage   :: 81.84% A2 Subject Coverage :: 82.5% ##Taxonomic-Update-Statistics-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000021905.1-RS_2024_11_20 Annotation Date                   :: 11/20/2024 07:01:43 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1 Current Name        :: Desulfatibacillum aliphaticivorans Previous Name       :: Desulfatibacillum alkenivorans AK-01 Date Updated        :: 2019-04-22 Analysis Type       :: Average Nucleotide Identity (ANI) Analysis 1 (A1)     :: Query vs. TYPE genome for current name A1 Genome (subject) :: GCA_000429905.1 A1 Name             :: Desulfatibacillum aliphaticivorans A1 ANI              :: 97.50372% A1 Query Coverage   :: 86.42% A1 Subject Coverage :: 87.09% Analysis 2 (A2)     :: Query vs. TYPE genome for previous name A2 Genome (subject) :: GCA_900142135.1 A2 Name             :: Desulfatibacillum alkenivorans AK-01 A2 ANI              :: 92.85495% A2 Query Coverage   :: 81.84% A2 Subject Coverage :: 82.5% ##Taxonomic-Update-Statistics-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000021905.1-RS_2024_11_20 Annotation Date                   :: 11/20/2024 07:01:43 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1 Current Name        :: Desulfatibacillum aliphaticivorans Previous Name       :: Desulfatibacillum alkenivorans AK-01 Date Updated        :: 2019-04-22 Analysis Type       :: Average Nucleotide Identity (ANI) Analysis 1 (A1)     :: Query vs. TYPE genome for current name A1 Genome (subject) :: GCA_000429905.1 A1 Name             :: Desulfatibacillum aliphaticivorans A1 ANI              :: 97.50372% A1 Query Coverage   :: 86.42% A1 Subject Coverage :: 87.09% Analysis 2 (A2)     :: Query vs. TYPE genome for previous name A2 Genome (subject) :: GCA_900142135.1 A2 Name             :: Desulfatibacillum alkenivorans AK-01 A2 ANI              :: 92.85495% A2 Query Coverage   :: 81.84% A2 Subject Coverage :: 82.5% ##Taxonomic-Update-Statistics-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000021905.1-RS_2024_11_20 Annotation Date                   :: 11/20/2024 07:01:43 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1 Current Name        :: Desulfatibacillum aliphaticivorans Previous Name       :: Desulfatibacillum alkenivorans AK-01 Date Updated        :: 2019-04-22 Analysis Type       :: Average Nucleotide Identity (ANI) Analysis 1 (A1)     :: Query vs. TYPE genome for current name A1 Genome (subject) :: GCA_000429905.1 A1 Name             :: Desulfatibacillum aliphaticivorans A1 ANI              :: 97.50372% A1 Query Coverage   :: 86.42% A1 Subject Coverage :: 87.09% Analysis 2 (A2)     :: Query vs. TYPE genome for previous name A2 Genome (subject) :: GCA_900142135.1 A2 Name             :: Desulfatibacillum alkenivorans AK-01 A2 ANI              :: 92.85495% A2 Query Coverage   :: 81.84% A2 Subject Coverage :: 82.5% ##Taxonomic-Update-Statistics-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000021905.1-RS_2024_11_20 Annotation Date                   :: 11/20/2024 07:01:43 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.9REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1 Current Name        :: Desulfatibacillum aliphaticivorans Previous Name       :: Desulfatibacillum alkenivorans AK-01 Date Updated        :: 2019-04-22 Analysis Type       :: Average Nucleotide Identity (ANI) Analysis 1 (A1)     :: Query vs. TYPE genome for current name A1 Genome (subject) :: GCA_000429905.1 A1 Name             :: Desulfatibacillum aliphaticivorans A1 ANI              :: 97.50372% A1 Query Coverage   :: 86.42% A1 Subject Coverage :: 87.09% Analysis 2 (A2)     :: Query vs. TYPE genome for previous name A2 Genome (subject) :: GCA_900142135.1 A2 Name             :: Desulfatibacillum alkenivorans AK-01 A2 ANI              :: 92.85495% A2 Query Coverage   :: 81.84% A2 Subject Coverage :: 82.5% ##Taxonomic-Update-Statistics-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000021905.1-RS_2024_11_20 Annotation Date                   :: 11/20/2024 07:01:43 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.9 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1 Current Name        :: Desulfatibacillum aliphaticivorans Previous Name       :: Desulfatibacillum alkenivorans AK-01 Date Updated        :: 2019-04-22 Analysis Type       :: Average Nucleotide Identity (ANI) Analysis 1 (A1)     :: Query vs. TYPE genome for current name A1 Genome (subject) :: GCA_000429905.1 A1 Name             :: Desulfatibacillum aliphaticivorans A1 ANI              :: 97.50372% A1 Query Coverage   :: 86.42% A1 Subject Coverage :: 87.09% Analysis 2 (A2)     :: Query vs. TYPE genome for previous name A2 Genome (subject) :: GCA_900142135.1 A2 Name             :: Desulfatibacillum alkenivorans AK-01 A2 ANI              :: 92.85495% A2 Query Coverage   :: 81.84% A2 Subject Coverage :: 82.5% ##Taxonomic-Update-Statistics-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000021905.1-RS_2024_11_20 Annotation Date                   :: 11/20/2024 07:01:43 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.9 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 5,366REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1 Current Name        :: Desulfatibacillum aliphaticivorans Previous Name       :: Desulfatibacillum alkenivorans AK-01 Date Updated        :: 2019-04-22 Analysis Type       :: Average Nucleotide Identity (ANI) Analysis 1 (A1)     :: Query vs. TYPE genome for current name A1 Genome (subject) :: GCA_000429905.1 A1 Name             :: Desulfatibacillum aliphaticivorans A1 ANI              :: 97.50372% A1 Query Coverage   :: 86.42% A1 Subject Coverage :: 87.09% Analysis 2 (A2)     :: Query vs. TYPE genome for previous name A2 Genome (subject) :: GCA_900142135.1 A2 Name             :: Desulfatibacillum alkenivorans AK-01 A2 ANI              :: 92.85495% A2 Query Coverage   :: 81.84% A2 Subject Coverage :: 82.5% ##Taxonomic-Update-Statistics-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000021905.1-RS_2024_11_20 Annotation Date                   :: 11/20/2024 07:01:43 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.9 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 5,366 CDSs (total)                      :: 5,299REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1 Current Name        :: Desulfatibacillum aliphaticivorans Previous Name       :: Desulfatibacillum alkenivorans AK-01 Date Updated        :: 2019-04-22 Analysis Type       :: Average Nucleotide Identity (ANI) Analysis 1 (A1)     :: Query vs. TYPE genome for current name A1 Genome (subject) :: GCA_000429905.1 A1 Name             :: Desulfatibacillum aliphaticivorans A1 ANI              :: 97.50372% A1 Query Coverage   :: 86.42% A1 Subject Coverage :: 87.09% Analysis 2 (A2)     :: Query vs. TYPE genome for previous name A2 Genome (subject) :: GCA_900142135.1 A2 Name             :: Desulfatibacillum alkenivorans AK-01 A2 ANI              :: 92.85495% A2 Query Coverage   :: 81.84% A2 Subject Coverage :: 82.5% ##Taxonomic-Update-Statistics-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000021905.1-RS_2024_11_20 Annotation Date                   :: 11/20/2024 07:01:43 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.9 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 5,366 CDSs (total)                      :: 5,299 Genes (coding)                    :: 5,265REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1 Current Name        :: Desulfatibacillum aliphaticivorans Previous Name       :: Desulfatibacillum alkenivorans AK-01 Date Updated        :: 2019-04-22 Analysis Type       :: Average Nucleotide Identity (ANI) Analysis 1 (A1)     :: Query vs. TYPE genome for current name A1 Genome (subject) :: GCA_000429905.1 A1 Name             :: Desulfatibacillum aliphaticivorans A1 ANI              :: 97.50372% A1 Query Coverage   :: 86.42% A1 Subject Coverage :: 87.09% Analysis 2 (A2)     :: Query vs. TYPE genome for previous name A2 Genome (subject) :: GCA_900142135.1 A2 Name             :: Desulfatibacillum alkenivorans AK-01 A2 ANI              :: 92.85495% A2 Query Coverage   :: 81.84% A2 Subject Coverage :: 82.5% ##Taxonomic-Update-Statistics-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000021905.1-RS_2024_11_20 Annotation Date                   :: 11/20/2024 07:01:43 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.9 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 5,366 CDSs (total)                      :: 5,299 Genes (coding)                    :: 5,265 CDSs (with protein)               :: 5,265REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1 Current Name        :: Desulfatibacillum aliphaticivorans Previous Name       :: Desulfatibacillum alkenivorans AK-01 Date Updated        :: 2019-04-22 Analysis Type       :: Average Nucleotide Identity (ANI) Analysis 1 (A1)     :: Query vs. TYPE genome for current name A1 Genome (subject) :: GCA_000429905.1 A1 Name             :: Desulfatibacillum aliphaticivorans A1 ANI              :: 97.50372% A1 Query Coverage   :: 86.42% A1 Subject Coverage :: 87.09% Analysis 2 (A2)     :: Query vs. TYPE genome for previous name A2 Genome (subject) :: GCA_900142135.1 A2 Name             :: Desulfatibacillum alkenivorans AK-01 A2 ANI              :: 92.85495% A2 Query Coverage   :: 81.84% A2 Subject Coverage :: 82.5% ##Taxonomic-Update-Statistics-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000021905.1-RS_2024_11_20 Annotation Date                   :: 11/20/2024 07:01:43 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.9 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 5,366 CDSs (total)                      :: 5,299 Genes (coding)                    :: 5,265 CDSs (with protein)               :: 5,265 Genes (RNA)                       :: 67REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1 Current Name        :: Desulfatibacillum aliphaticivorans Previous Name       :: Desulfatibacillum alkenivorans AK-01 Date Updated        :: 2019-04-22 Analysis Type       :: Average Nucleotide Identity (ANI) Analysis 1 (A1)     :: Query vs. TYPE genome for current name A1 Genome (subject) :: GCA_000429905.1 A1 Name             :: Desulfatibacillum aliphaticivorans A1 ANI              :: 97.50372% A1 Query Coverage   :: 86.42% A1 Subject Coverage :: 87.09% Analysis 2 (A2)     :: Query vs. TYPE genome for previous name A2 Genome (subject) :: GCA_900142135.1 A2 Name             :: Desulfatibacillum alkenivorans AK-01 A2 ANI              :: 92.85495% A2 Query Coverage   :: 81.84% A2 Subject Coverage :: 82.5% ##Taxonomic-Update-Statistics-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000021905.1-RS_2024_11_20 Annotation Date                   :: 11/20/2024 07:01:43 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.9 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 5,366 CDSs (total)                      :: 5,299 Genes (coding)                    :: 5,265 CDSs (with protein)               :: 5,265 Genes (RNA)                       :: 67 rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1 Current Name        :: Desulfatibacillum aliphaticivorans Previous Name       :: Desulfatibacillum alkenivorans AK-01 Date Updated        :: 2019-04-22 Analysis Type       :: Average Nucleotide Identity (ANI) Analysis 1 (A1)     :: Query vs. TYPE genome for current name A1 Genome (subject) :: GCA_000429905.1 A1 Name             :: Desulfatibacillum aliphaticivorans A1 ANI              :: 97.50372% A1 Query Coverage   :: 86.42% A1 Subject Coverage :: 87.09% Analysis 2 (A2)     :: Query vs. TYPE genome for previous name A2 Genome (subject) :: GCA_900142135.1 A2 Name             :: Desulfatibacillum alkenivorans AK-01 A2 ANI              :: 92.85495% A2 Query Coverage   :: 81.84% A2 Subject Coverage :: 82.5% ##Taxonomic-Update-Statistics-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000021905.1-RS_2024_11_20 Annotation Date                   :: 11/20/2024 07:01:43 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.9 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 5,366 CDSs (total)                      :: 5,299 Genes (coding)                    :: 5,265 CDSs (with protein)               :: 5,265 Genes (RNA)                       :: 67 rRNAs                             :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1 Current Name        :: Desulfatibacillum aliphaticivorans Previous Name       :: Desulfatibacillum alkenivorans AK-01 Date Updated        :: 2019-04-22 Analysis Type       :: Average Nucleotide Identity (ANI) Analysis 1 (A1)     :: Query vs. TYPE genome for current name A1 Genome (subject) :: GCA_000429905.1 A1 Name             :: Desulfatibacillum aliphaticivorans A1 ANI              :: 97.50372% A1 Query Coverage   :: 86.42% A1 Subject Coverage :: 87.09% Analysis 2 (A2)     :: Query vs. TYPE genome for previous name A2 Genome (subject) :: GCA_900142135.1 A2 Name             :: Desulfatibacillum alkenivorans AK-01 A2 ANI              :: 92.85495% A2 Query Coverage   :: 81.84% A2 Subject Coverage :: 82.5% ##Taxonomic-Update-Statistics-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000021905.1-RS_2024_11_20 Annotation Date                   :: 11/20/2024 07:01:43 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.9 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 5,366 CDSs (total)                      :: 5,299 Genes (coding)                    :: 5,265 CDSs (with protein)               :: 5,265 Genes (RNA)                       :: 67 rRNAs                             :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S) tRNAs                             :: 57REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1 Current Name        :: Desulfatibacillum aliphaticivorans Previous Name       :: Desulfatibacillum alkenivorans AK-01 Date Updated        :: 2019-04-22 Analysis Type       :: Average Nucleotide Identity (ANI) Analysis 1 (A1)     :: Query vs. TYPE genome for current name A1 Genome (subject) :: GCA_000429905.1 A1 Name             :: Desulfatibacillum aliphaticivorans A1 ANI              :: 97.50372% A1 Query Coverage   :: 86.42% A1 Subject Coverage :: 87.09% Analysis 2 (A2)     :: Query vs. TYPE genome for previous name A2 Genome (subject) :: GCA_900142135.1 A2 Name             :: Desulfatibacillum alkenivorans AK-01 A2 ANI              :: 92.85495% A2 Query Coverage   :: 81.84% A2 Subject Coverage :: 82.5% ##Taxonomic-Update-Statistics-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000021905.1-RS_2024_11_20 Annotation Date                   :: 11/20/2024 07:01:43 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.9 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 5,366 CDSs (total)                      :: 5,299 Genes (coding)                    :: 5,265 CDSs (with protein)               :: 5,265 Genes (RNA)                       :: 67 rRNAs                             :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S) tRNAs                             :: 57 ncRNAs                            :: 4REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1 Current Name        :: Desulfatibacillum aliphaticivorans Previous Name       :: Desulfatibacillum alkenivorans AK-01 Date Updated        :: 2019-04-22 Analysis Type       :: Average Nucleotide Identity (ANI) Analysis 1 (A1)     :: Query vs. TYPE genome for current name A1 Genome (subject) :: GCA_000429905.1 A1 Name             :: Desulfatibacillum aliphaticivorans A1 ANI              :: 97.50372% A1 Query Coverage   :: 86.42% A1 Subject Coverage :: 87.09% Analysis 2 (A2)     :: Query vs. TYPE genome for previous name A2 Genome (subject) :: GCA_900142135.1 A2 Name             :: Desulfatibacillum alkenivorans AK-01 A2 ANI              :: 92.85495% A2 Query Coverage   :: 81.84% A2 Subject Coverage :: 82.5% ##Taxonomic-Update-Statistics-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000021905.1-RS_2024_11_20 Annotation Date                   :: 11/20/2024 07:01:43 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.9 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 5,366 CDSs (total)                      :: 5,299 Genes (coding)                    :: 5,265 CDSs (with protein)               :: 5,265 Genes (RNA)                       :: 67 rRNAs                             :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S) tRNAs                             :: 57 ncRNAs                            :: 4 Pseudo Genes (total)              :: 34REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1 Current Name        :: Desulfatibacillum aliphaticivorans Previous Name       :: Desulfatibacillum alkenivorans AK-01 Date Updated        :: 2019-04-22 Analysis Type       :: Average Nucleotide Identity (ANI) Analysis 1 (A1)     :: Query vs. TYPE genome for current name A1 Genome (subject) :: GCA_000429905.1 A1 Name             :: Desulfatibacillum aliphaticivorans A1 ANI              :: 97.50372% A1 Query Coverage   :: 86.42% A1 Subject Coverage :: 87.09% Analysis 2 (A2)     :: Query vs. TYPE genome for previous name A2 Genome (subject) :: GCA_900142135.1 A2 Name             :: Desulfatibacillum alkenivorans AK-01 A2 ANI              :: 92.85495% A2 Query Coverage   :: 81.84% A2 Subject Coverage :: 82.5% ##Taxonomic-Update-Statistics-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000021905.1-RS_2024_11_20 Annotation Date                   :: 11/20/2024 07:01:43 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.9 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 5,366 CDSs (total)                      :: 5,299 Genes (coding)                    :: 5,265 CDSs (with protein)               :: 5,265 Genes (RNA)                       :: 67 rRNAs                             :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S) tRNAs                             :: 57 ncRNAs                            :: 4 Pseudo Genes (total)              :: 34 CDSs (without protein)            :: 34REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1 Current Name        :: Desulfatibacillum aliphaticivorans Previous Name       :: Desulfatibacillum alkenivorans AK-01 Date Updated        :: 2019-04-22 Analysis Type       :: Average Nucleotide Identity (ANI) Analysis 1 (A1)     :: Query vs. TYPE genome for current name A1 Genome (subject) :: GCA_000429905.1 A1 Name             :: Desulfatibacillum aliphaticivorans A1 ANI              :: 97.50372% A1 Query Coverage   :: 86.42% A1 Subject Coverage :: 87.09% Analysis 2 (A2)     :: Query vs. TYPE genome for previous name A2 Genome (subject) :: GCA_900142135.1 A2 Name             :: Desulfatibacillum alkenivorans AK-01 A2 ANI              :: 92.85495% A2 Query Coverage   :: 81.84% A2 Subject Coverage :: 82.5% ##Taxonomic-Update-Statistics-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000021905.1-RS_2024_11_20 Annotation Date                   :: 11/20/2024 07:01:43 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.9 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 5,366 CDSs (total)                      :: 5,299 Genes (coding)                    :: 5,265 CDSs (with protein)               :: 5,265 Genes (RNA)                       :: 67 rRNAs                             :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S) tRNAs                             :: 57 ncRNAs                            :: 4 Pseudo Genes (total)              :: 34 CDSs (without protein)            :: 34 Pseudo Genes (ambiguous residues) :: 0 of 34REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1 Current Name        :: Desulfatibacillum aliphaticivorans Previous Name       :: Desulfatibacillum alkenivorans AK-01 Date Updated        :: 2019-04-22 Analysis Type       :: Average Nucleotide Identity (ANI) Analysis 1 (A1)     :: Query vs. TYPE genome for current name A1 Genome (subject) :: GCA_000429905.1 A1 Name             :: Desulfatibacillum aliphaticivorans A1 ANI              :: 97.50372% A1 Query Coverage   :: 86.42% A1 Subject Coverage :: 87.09% Analysis 2 (A2)     :: Query vs. TYPE genome for previous name A2 Genome (subject) :: GCA_900142135.1 A2 Name             :: Desulfatibacillum alkenivorans AK-01 A2 ANI              :: 92.85495% A2 Query Coverage   :: 81.84% A2 Subject Coverage :: 82.5% ##Taxonomic-Update-Statistics-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000021905.1-RS_2024_11_20 Annotation Date                   :: 11/20/2024 07:01:43 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.9 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 5,366 CDSs (total)                      :: 5,299 Genes (coding)                    :: 5,265 CDSs (with protein)               :: 5,265 Genes (RNA)                       :: 67 rRNAs                             :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S) tRNAs                             :: 57 ncRNAs                            :: 4 Pseudo Genes (total)              :: 34 CDSs (without protein)            :: 34 Pseudo Genes (ambiguous residues) :: 0 of 34 Pseudo Genes (frameshifted)       :: 3 of 34REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1 Current Name        :: Desulfatibacillum aliphaticivorans Previous Name       :: Desulfatibacillum alkenivorans AK-01 Date Updated        :: 2019-04-22 Analysis Type       :: Average Nucleotide Identity (ANI) Analysis 1 (A1)     :: Query vs. TYPE genome for current name A1 Genome (subject) :: GCA_000429905.1 A1 Name             :: Desulfatibacillum aliphaticivorans A1 ANI              :: 97.50372% A1 Query Coverage   :: 86.42% A1 Subject Coverage :: 87.09% Analysis 2 (A2)     :: Query vs. TYPE genome for previous name A2 Genome (subject) :: GCA_900142135.1 A2 Name             :: Desulfatibacillum alkenivorans AK-01 A2 ANI              :: 92.85495% A2 Query Coverage   :: 81.84% A2 Subject Coverage :: 82.5% ##Taxonomic-Update-Statistics-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000021905.1-RS_2024_11_20 Annotation Date                   :: 11/20/2024 07:01:43 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.9 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 5,366 CDSs (total)                      :: 5,299 Genes (coding)                    :: 5,265 CDSs (with protein)               :: 5,265 Genes (RNA)                       :: 67 rRNAs                             :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S) tRNAs                             :: 57 ncRNAs                            :: 4 Pseudo Genes (total)              :: 34 CDSs (without protein)            :: 34 Pseudo Genes (ambiguous residues) :: 0 of 34 Pseudo Genes (frameshifted)       :: 3 of 34 Pseudo Genes (incomplete)         :: 33 of 34REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1 Current Name        :: Desulfatibacillum aliphaticivorans Previous Name       :: Desulfatibacillum alkenivorans AK-01 Date Updated        :: 2019-04-22 Analysis Type       :: Average Nucleotide Identity (ANI) Analysis 1 (A1)     :: Query vs. TYPE genome for current name A1 Genome (subject) :: GCA_000429905.1 A1 Name             :: Desulfatibacillum aliphaticivorans A1 ANI              :: 97.50372% A1 Query Coverage   :: 86.42% A1 Subject Coverage :: 87.09% Analysis 2 (A2)     :: Query vs. TYPE genome for previous name A2 Genome (subject) :: GCA_900142135.1 A2 Name             :: Desulfatibacillum alkenivorans AK-01 A2 ANI              :: 92.85495% A2 Query Coverage   :: 81.84% A2 Subject Coverage :: 82.5% ##Taxonomic-Update-Statistics-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000021905.1-RS_2024_11_20 Annotation Date                   :: 11/20/2024 07:01:43 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.9 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 5,366 CDSs (total)                      :: 5,299 Genes (coding)                    :: 5,265 CDSs (with protein)               :: 5,265 Genes (RNA)                       :: 67 rRNAs                             :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S) tRNAs                             :: 57 ncRNAs                            :: 4 Pseudo Genes (total)              :: 34 CDSs (without protein)            :: 34 Pseudo Genes (ambiguous residues) :: 0 of 34 Pseudo Genes (frameshifted)       :: 3 of 34 Pseudo Genes (incomplete)         :: 33 of 34 Pseudo Genes (internal stop)      :: 1 of 34REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1 Current Name        :: Desulfatibacillum aliphaticivorans Previous Name       :: Desulfatibacillum alkenivorans AK-01 Date Updated        :: 2019-04-22 Analysis Type       :: Average Nucleotide Identity (ANI) Analysis 1 (A1)     :: Query vs. TYPE genome for current name A1 Genome (subject) :: GCA_000429905.1 A1 Name             :: Desulfatibacillum aliphaticivorans A1 ANI              :: 97.50372% A1 Query Coverage   :: 86.42% A1 Subject Coverage :: 87.09% Analysis 2 (A2)     :: Query vs. TYPE genome for previous name A2 Genome (subject) :: GCA_900142135.1 A2 Name             :: Desulfatibacillum alkenivorans AK-01 A2 ANI              :: 92.85495% A2 Query Coverage   :: 81.84% A2 Subject Coverage :: 82.5% ##Taxonomic-Update-Statistics-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000021905.1-RS_2024_11_20 Annotation Date                   :: 11/20/2024 07:01:43 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.9 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 5,366 CDSs (total)                      :: 5,299 Genes (coding)                    :: 5,265 CDSs (with protein)               :: 5,265 Genes (RNA)                       :: 67 rRNAs                             :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S) tRNAs                             :: 57 ncRNAs                            :: 4 Pseudo Genes (total)              :: 34 CDSs (without protein)            :: 34 Pseudo Genes (ambiguous residues) :: 0 of 34 Pseudo Genes (frameshifted)       :: 3 of 34 Pseudo Genes (incomplete)         :: 33 of 34 Pseudo Genes (internal stop)      :: 1 of 34 Pseudo Genes (multiple problems)  :: 3 of 34REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1 Current Name        :: Desulfatibacillum aliphaticivorans Previous Name       :: Desulfatibacillum alkenivorans AK-01 Date Updated        :: 2019-04-22 Analysis Type       :: Average Nucleotide Identity (ANI) Analysis 1 (A1)     :: Query vs. TYPE genome for current name A1 Genome (subject) :: GCA_000429905.1 A1 Name             :: Desulfatibacillum aliphaticivorans A1 ANI              :: 97.50372% A1 Query Coverage   :: 86.42% A1 Subject Coverage :: 87.09% Analysis 2 (A2)     :: Query vs. TYPE genome for previous name A2 Genome (subject) :: GCA_900142135.1 A2 Name             :: Desulfatibacillum alkenivorans AK-01 A2 ANI              :: 92.85495% A2 Query Coverage   :: 81.84% A2 Subject Coverage :: 82.5% ##Taxonomic-Update-Statistics-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000021905.1-RS_2024_11_20 Annotation Date                   :: 11/20/2024 07:01:43 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.9 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 5,366 CDSs (total)                      :: 5,299 Genes (coding)                    :: 5,265 CDSs (with protein)               :: 5,265 Genes (RNA)                       :: 67 rRNAs                             :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S) tRNAs                             :: 57 ncRNAs                            :: 4 Pseudo Genes (total)              :: 34 CDSs (without protein)            :: 34 Pseudo Genes (ambiguous residues) :: 0 of 34 Pseudo Genes (frameshifted)       :: 3 of 34 Pseudo Genes (incomplete)         :: 33 of 34 Pseudo Genes (internal stop)      :: 1 of 34 Pseudo Genes (multiple problems)  :: 3 of 34 CRISPR Arrays                     :: 1REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1 Current Name        :: Desulfatibacillum aliphaticivorans Previous Name       :: Desulfatibacillum alkenivorans AK-01 Date Updated        :: 2019-04-22 Analysis Type       :: Average Nucleotide Identity (ANI) Analysis 1 (A1)     :: Query vs. TYPE genome for current name A1 Genome (subject) :: GCA_000429905.1 A1 Name             :: Desulfatibacillum aliphaticivorans A1 ANI              :: 97.50372% A1 Query Coverage   :: 86.42% A1 Subject Coverage :: 87.09% Analysis 2 (A2)     :: Query vs. TYPE genome for previous name A2 Genome (subject) :: GCA_900142135.1 A2 Name             :: Desulfatibacillum alkenivorans AK-01 A2 ANI              :: 92.85495% A2 Query Coverage   :: 81.84% A2 Subject Coverage :: 82.5% ##Taxonomic-Update-Statistics-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000021905.1-RS_2024_11_20 Annotation Date                   :: 11/20/2024 07:01:43 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.9 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 5,366 CDSs (total)                      :: 5,299 Genes (coding)                    :: 5,265 CDSs (with protein)               :: 5,265 Genes (RNA)                       :: 67 rRNAs                             :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S) tRNAs                             :: 57 ncRNAs                            :: 4 Pseudo Genes (total)              :: 34 CDSs (without protein)            :: 34 Pseudo Genes (ambiguous residues) :: 0 of 34 Pseudo Genes (frameshifted)       :: 3 of 34 Pseudo Genes (incomplete)         :: 33 of 34 Pseudo Genes (internal stop)      :: 1 of 34 Pseudo Genes (multiple problems)  :: 3 of 34 CRISPR Arrays                     :: 1 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP001322.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4003083 Source DNA and bacteria available from Boris Wawrik (bwawrik@yahoo.com) Contacts: Boris Wawrik (bwawrik@yahoo.com)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The organism was changed from 'Desulfatibacillum alkenivorans AK-01' to 'Desulfatibacillum aliphaticivorans' in April 2019. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Taxonomic-Update-Statistics-START## This Genome (query) :: GCA_000021905.1 Current Name        :: Desulfatibacillum aliphaticivorans Previous Name       :: Desulfatibacillum alkenivorans AK-01 Date Updated        :: 2019-04-22 Analysis Type       :: Average Nucleotide Identity (ANI) Analysis 1 (A1)     :: Query vs. TYPE genome for current name A1 Genome (subject) :: GCA_000429905.1 A1 Name             :: Desulfatibacillum aliphaticivorans A1 ANI              :: 97.50372% A1 Query Coverage   :: 86.42% A1 Subject Coverage :: 87.09% Analysis 2 (A2)     :: Query vs. TYPE genome for previous name A2 Genome (subject) :: GCA_900142135.1 A2 Name             :: Desulfatibacillum alkenivorans AK-01 A2 ANI              :: 92.85495% A2 Query Coverage   :: 81.84% A2 Subject Coverage :: 82.5% ##Taxonomic-Update-Statistics-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000021905.1-RS_2024_11_20 Annotation Date                   :: 11/20/2024 07:01:43 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.9 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 5,366 CDSs (total)                      :: 5,299 Genes (coding)                    :: 5,265 CDSs (with protein)               :: 5,265 Genes (RNA)                       :: 67 rRNAs                             :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S) tRNAs                             :: 57 ncRNAs                            :: 4 Pseudo Genes (total)              :: 34 CDSs (without protein)            :: 34 Pseudo Genes (ambiguous residues) :: 0 of 34 Pseudo Genes (frameshifted)       :: 3 of 34 Pseudo Genes (incomplete)         :: 33 of 34 Pseudo Genes (internal stop)      :: 1 of 34 Pseudo Genes (multiple problems)  :: 3 of 34 CRISPR Arrays                     :: 1 ##Genome-Annotation-Data-END## COMPLETENESS: full length.