-- dump date 20240506_005615 -- class Genbank::Contig -- table contig_comment -- id comment NZ_CP007032.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP007032.1.REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke SmidtREFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl)REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl)REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl)REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl)REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNLREFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaeaREFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducensREFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4mREFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USAREFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free livingREFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: AnaerobeREFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; AquaticREFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGSREFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: YesREFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMPREFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sedimentREFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of theREFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of the San Juan River at the Department ofREFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of the San Juan River at the Department of Energy (DOE) uranium mill tailings siteREFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of the San Juan River at the Department of Energy (DOE) uranium mill tailings site in Shiprock, NM, USA.REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of the San Juan River at the Department of Energy (DOE) uranium mill tailings site in Shiprock, NM, USA. Isolation Comments :: isolated by K. T. FinneranREFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of the San Juan River at the Department of Energy (DOE) uranium mill tailings site in Shiprock, NM, USA. Isolation Comments :: isolated by K. T. Finneran Cell Shape :: Rod-shapedREFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of the San Juan River at the Department of Energy (DOE) uranium mill tailings site in Shiprock, NM, USA. Isolation Comments :: isolated by K. T. Finneran Cell Shape :: Rod-shaped Motility :: MotileREFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of the San Juan River at the Department of Energy (DOE) uranium mill tailings site in Shiprock, NM, USA. Isolation Comments :: isolated by K. T. Finneran Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: SporulatingREFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of the San Juan River at the Department of Energy (DOE) uranium mill tailings site in Shiprock, NM, USA. Isolation Comments :: isolated by K. T. Finneran Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: MesophileREFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of the San Juan River at the Department of Energy (DOE) uranium mill tailings site in Shiprock, NM, USA. Isolation Comments :: isolated by K. T. Finneran Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 30CREFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of the San Juan River at the Department of Energy (DOE) uranium mill tailings site in Shiprock, NM, USA. Isolation Comments :: isolated by K. T. Finneran Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram-REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of the San Juan River at the Department of Energy (DOE) uranium mill tailings site in Shiprock, NM, USA. Isolation Comments :: isolated by K. T. Finneran Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Sequencing Depth :: 30xREFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of the San Juan River at the Department of Energy (DOE) uranium mill tailings site in Shiprock, NM, USA. Isolation Comments :: isolated by K. T. Finneran Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Sequencing Depth :: 30x Diseases :: NoneREFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of the San Juan River at the Department of Energy (DOE) uranium mill tailings site in Shiprock, NM, USA. Isolation Comments :: isolated by K. T. Finneran Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Sequencing Depth :: 30x Diseases :: None ##MIGS-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of the San Juan River at the Department of Energy (DOE) uranium mill tailings site in Shiprock, NM, USA. Isolation Comments :: isolated by K. T. Finneran Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Sequencing Depth :: 30x Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of the San Juan River at the Department of Energy (DOE) uranium mill tailings site in Shiprock, NM, USA. Isolation Comments :: isolated by K. T. Finneran Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Sequencing Depth :: 30x Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Current Finishing Status :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of the San Juan River at the Department of Energy (DOE) uranium mill tailings site in Shiprock, NM, USA. Isolation Comments :: isolated by K. T. Finneran Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Sequencing Depth :: 30x Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.5REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of the San Juan River at the Department of Energy (DOE) uranium mill tailings site in Shiprock, NM, USA. Isolation Comments :: isolated by K. T. Finneran Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Sequencing Depth :: 30x Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.5 Genome Coverage :: 30xREFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of the San Juan River at the Department of Energy (DOE) uranium mill tailings site in Shiprock, NM, USA. Isolation Comments :: isolated by K. T. Finneran Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Sequencing Depth :: 30x Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.5 Genome Coverage :: 30x Sequencing Technology :: 454; IlluminaREFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of the San Juan River at the Department of Energy (DOE) uranium mill tailings site in Shiprock, NM, USA. Isolation Comments :: isolated by K. T. Finneran Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Sequencing Depth :: 30x Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.5 Genome Coverage :: 30x Sequencing Technology :: 454; Illumina ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of the San Juan River at the Department of Energy (DOE) uranium mill tailings site in Shiprock, NM, USA. Isolation Comments :: isolated by K. T. Finneran Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Sequencing Depth :: 30x Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.5 Genome Coverage :: 30x Sequencing Technology :: 454; Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of the San Juan River at the Department of Energy (DOE) uranium mill tailings site in Shiprock, NM, USA. Isolation Comments :: isolated by K. T. Finneran Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Sequencing Depth :: 30x Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.5 Genome Coverage :: 30x Sequencing Technology :: 454; Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of the San Juan River at the Department of Energy (DOE) uranium mill tailings site in Shiprock, NM, USA. Isolation Comments :: isolated by K. T. Finneran Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Sequencing Depth :: 30x Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.5 Genome Coverage :: 30x Sequencing Technology :: 454; Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/14/2023 00:58:39REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of the San Juan River at the Department of Energy (DOE) uranium mill tailings site in Shiprock, NM, USA. Isolation Comments :: isolated by K. T. Finneran Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Sequencing Depth :: 30x Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.5 Genome Coverage :: 30x Sequencing Technology :: 454; Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/14/2023 00:58:39 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of the San Juan River at the Department of Energy (DOE) uranium mill tailings site in Shiprock, NM, USA. Isolation Comments :: isolated by K. T. Finneran Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Sequencing Depth :: 30x Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.5 Genome Coverage :: 30x Sequencing Technology :: 454; Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/14/2023 00:58:39 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of the San Juan River at the Department of Energy (DOE) uranium mill tailings site in Shiprock, NM, USA. Isolation Comments :: isolated by K. T. Finneran Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Sequencing Depth :: 30x Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.5 Genome Coverage :: 30x Sequencing Technology :: 454; Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/14/2023 00:58:39 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of the San Juan River at the Department of Energy (DOE) uranium mill tailings site in Shiprock, NM, USA. Isolation Comments :: isolated by K. T. Finneran Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Sequencing Depth :: 30x Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.5 Genome Coverage :: 30x Sequencing Technology :: 454; Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/14/2023 00:58:39 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of the San Juan River at the Department of Energy (DOE) uranium mill tailings site in Shiprock, NM, USA. Isolation Comments :: isolated by K. T. Finneran Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Sequencing Depth :: 30x Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.5 Genome Coverage :: 30x Sequencing Technology :: 454; Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/14/2023 00:58:39 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of the San Juan River at the Department of Energy (DOE) uranium mill tailings site in Shiprock, NM, USA. Isolation Comments :: isolated by K. T. Finneran Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Sequencing Depth :: 30x Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.5 Genome Coverage :: 30x Sequencing Technology :: 454; Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/14/2023 00:58:39 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of the San Juan River at the Department of Energy (DOE) uranium mill tailings site in Shiprock, NM, USA. Isolation Comments :: isolated by K. T. Finneran Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Sequencing Depth :: 30x Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.5 Genome Coverage :: 30x Sequencing Technology :: 454; Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/14/2023 00:58:39 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,129REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of the San Juan River at the Department of Energy (DOE) uranium mill tailings site in Shiprock, NM, USA. Isolation Comments :: isolated by K. T. Finneran Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Sequencing Depth :: 30x Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.5 Genome Coverage :: 30x Sequencing Technology :: 454; Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/14/2023 00:58:39 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,129 CDSs (total) :: 3,028REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of the San Juan River at the Department of Energy (DOE) uranium mill tailings site in Shiprock, NM, USA. Isolation Comments :: isolated by K. T. Finneran Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Sequencing Depth :: 30x Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.5 Genome Coverage :: 30x Sequencing Technology :: 454; Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/14/2023 00:58:39 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,129 CDSs (total) :: 3,028 Genes (coding) :: 2,998REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of the San Juan River at the Department of Energy (DOE) uranium mill tailings site in Shiprock, NM, USA. Isolation Comments :: isolated by K. T. Finneran Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Sequencing Depth :: 30x Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.5 Genome Coverage :: 30x Sequencing Technology :: 454; Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/14/2023 00:58:39 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,129 CDSs (total) :: 3,028 Genes (coding) :: 2,998 CDSs (with protein) :: 2,998REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of the San Juan River at the Department of Energy (DOE) uranium mill tailings site in Shiprock, NM, USA. Isolation Comments :: isolated by K. T. Finneran Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Sequencing Depth :: 30x Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.5 Genome Coverage :: 30x Sequencing Technology :: 454; Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/14/2023 00:58:39 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,129 CDSs (total) :: 3,028 Genes (coding) :: 2,998 CDSs (with protein) :: 2,998 Genes (RNA) :: 101REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of the San Juan River at the Department of Energy (DOE) uranium mill tailings site in Shiprock, NM, USA. Isolation Comments :: isolated by K. T. Finneran Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Sequencing Depth :: 30x Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.5 Genome Coverage :: 30x Sequencing Technology :: 454; Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/14/2023 00:58:39 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,129 CDSs (total) :: 3,028 Genes (coding) :: 2,998 CDSs (with protein) :: 2,998 Genes (RNA) :: 101 rRNAs :: 8, 8, 8 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of the San Juan River at the Department of Energy (DOE) uranium mill tailings site in Shiprock, NM, USA. Isolation Comments :: isolated by K. T. Finneran Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Sequencing Depth :: 30x Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.5 Genome Coverage :: 30x Sequencing Technology :: 454; Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/14/2023 00:58:39 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,129 CDSs (total) :: 3,028 Genes (coding) :: 2,998 CDSs (with protein) :: 2,998 Genes (RNA) :: 101 rRNAs :: 8, 8, 8 (5S, 16S, 23S) complete rRNAs :: 8, 8, 8 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of the San Juan River at the Department of Energy (DOE) uranium mill tailings site in Shiprock, NM, USA. Isolation Comments :: isolated by K. T. Finneran Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Sequencing Depth :: 30x Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.5 Genome Coverage :: 30x Sequencing Technology :: 454; Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/14/2023 00:58:39 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,129 CDSs (total) :: 3,028 Genes (coding) :: 2,998 CDSs (with protein) :: 2,998 Genes (RNA) :: 101 rRNAs :: 8, 8, 8 (5S, 16S, 23S) complete rRNAs :: 8, 8, 8 (5S, 16S, 23S) tRNAs :: 73REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of the San Juan River at the Department of Energy (DOE) uranium mill tailings site in Shiprock, NM, USA. Isolation Comments :: isolated by K. T. Finneran Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Sequencing Depth :: 30x Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.5 Genome Coverage :: 30x Sequencing Technology :: 454; Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/14/2023 00:58:39 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,129 CDSs (total) :: 3,028 Genes (coding) :: 2,998 CDSs (with protein) :: 2,998 Genes (RNA) :: 101 rRNAs :: 8, 8, 8 (5S, 16S, 23S) complete rRNAs :: 8, 8, 8 (5S, 16S, 23S) tRNAs :: 73 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of the San Juan River at the Department of Energy (DOE) uranium mill tailings site in Shiprock, NM, USA. Isolation Comments :: isolated by K. T. Finneran Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Sequencing Depth :: 30x Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.5 Genome Coverage :: 30x Sequencing Technology :: 454; Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/14/2023 00:58:39 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,129 CDSs (total) :: 3,028 Genes (coding) :: 2,998 CDSs (with protein) :: 2,998 Genes (RNA) :: 101 rRNAs :: 8, 8, 8 (5S, 16S, 23S) complete rRNAs :: 8, 8, 8 (5S, 16S, 23S) tRNAs :: 73 ncRNAs :: 4 Pseudo Genes (total) :: 30REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of the San Juan River at the Department of Energy (DOE) uranium mill tailings site in Shiprock, NM, USA. Isolation Comments :: isolated by K. T. Finneran Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Sequencing Depth :: 30x Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.5 Genome Coverage :: 30x Sequencing Technology :: 454; Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/14/2023 00:58:39 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,129 CDSs (total) :: 3,028 Genes (coding) :: 2,998 CDSs (with protein) :: 2,998 Genes (RNA) :: 101 rRNAs :: 8, 8, 8 (5S, 16S, 23S) complete rRNAs :: 8, 8, 8 (5S, 16S, 23S) tRNAs :: 73 ncRNAs :: 4 Pseudo Genes (total) :: 30 CDSs (without protein) :: 30REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of the San Juan River at the Department of Energy (DOE) uranium mill tailings site in Shiprock, NM, USA. Isolation Comments :: isolated by K. T. Finneran Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Sequencing Depth :: 30x Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.5 Genome Coverage :: 30x Sequencing Technology :: 454; Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/14/2023 00:58:39 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,129 CDSs (total) :: 3,028 Genes (coding) :: 2,998 CDSs (with protein) :: 2,998 Genes (RNA) :: 101 rRNAs :: 8, 8, 8 (5S, 16S, 23S) complete rRNAs :: 8, 8, 8 (5S, 16S, 23S) tRNAs :: 73 ncRNAs :: 4 Pseudo Genes (total) :: 30 CDSs (without protein) :: 30 Pseudo Genes (ambiguous residues) :: 0 of 30REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of the San Juan River at the Department of Energy (DOE) uranium mill tailings site in Shiprock, NM, USA. Isolation Comments :: isolated by K. T. Finneran Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Sequencing Depth :: 30x Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.5 Genome Coverage :: 30x Sequencing Technology :: 454; Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/14/2023 00:58:39 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,129 CDSs (total) :: 3,028 Genes (coding) :: 2,998 CDSs (with protein) :: 2,998 Genes (RNA) :: 101 rRNAs :: 8, 8, 8 (5S, 16S, 23S) complete rRNAs :: 8, 8, 8 (5S, 16S, 23S) tRNAs :: 73 ncRNAs :: 4 Pseudo Genes (total) :: 30 CDSs (without protein) :: 30 Pseudo Genes (ambiguous residues) :: 0 of 30 Pseudo Genes (frameshifted) :: 7 of 30REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of the San Juan River at the Department of Energy (DOE) uranium mill tailings site in Shiprock, NM, USA. Isolation Comments :: isolated by K. T. Finneran Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Sequencing Depth :: 30x Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.5 Genome Coverage :: 30x Sequencing Technology :: 454; Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/14/2023 00:58:39 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,129 CDSs (total) :: 3,028 Genes (coding) :: 2,998 CDSs (with protein) :: 2,998 Genes (RNA) :: 101 rRNAs :: 8, 8, 8 (5S, 16S, 23S) complete rRNAs :: 8, 8, 8 (5S, 16S, 23S) tRNAs :: 73 ncRNAs :: 4 Pseudo Genes (total) :: 30 CDSs (without protein) :: 30 Pseudo Genes (ambiguous residues) :: 0 of 30 Pseudo Genes (frameshifted) :: 7 of 30 Pseudo Genes (incomplete) :: 23 of 30REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of the San Juan River at the Department of Energy (DOE) uranium mill tailings site in Shiprock, NM, USA. Isolation Comments :: isolated by K. T. Finneran Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Sequencing Depth :: 30x Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.5 Genome Coverage :: 30x Sequencing Technology :: 454; Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/14/2023 00:58:39 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,129 CDSs (total) :: 3,028 Genes (coding) :: 2,998 CDSs (with protein) :: 2,998 Genes (RNA) :: 101 rRNAs :: 8, 8, 8 (5S, 16S, 23S) complete rRNAs :: 8, 8, 8 (5S, 16S, 23S) tRNAs :: 73 ncRNAs :: 4 Pseudo Genes (total) :: 30 CDSs (without protein) :: 30 Pseudo Genes (ambiguous residues) :: 0 of 30 Pseudo Genes (frameshifted) :: 7 of 30 Pseudo Genes (incomplete) :: 23 of 30 Pseudo Genes (internal stop) :: 3 of 30REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of the San Juan River at the Department of Energy (DOE) uranium mill tailings site in Shiprock, NM, USA. Isolation Comments :: isolated by K. T. Finneran Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Sequencing Depth :: 30x Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.5 Genome Coverage :: 30x Sequencing Technology :: 454; Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/14/2023 00:58:39 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,129 CDSs (total) :: 3,028 Genes (coding) :: 2,998 CDSs (with protein) :: 2,998 Genes (RNA) :: 101 rRNAs :: 8, 8, 8 (5S, 16S, 23S) complete rRNAs :: 8, 8, 8 (5S, 16S, 23S) tRNAs :: 73 ncRNAs :: 4 Pseudo Genes (total) :: 30 CDSs (without protein) :: 30 Pseudo Genes (ambiguous residues) :: 0 of 30 Pseudo Genes (frameshifted) :: 7 of 30 Pseudo Genes (incomplete) :: 23 of 30 Pseudo Genes (internal stop) :: 3 of 30 Pseudo Genes (multiple problems) :: 3 of 30REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of the San Juan River at the Department of Energy (DOE) uranium mill tailings site in Shiprock, NM, USA. Isolation Comments :: isolated by K. T. Finneran Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Sequencing Depth :: 30x Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.5 Genome Coverage :: 30x Sequencing Technology :: 454; Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/14/2023 00:58:39 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,129 CDSs (total) :: 3,028 Genes (coding) :: 2,998 CDSs (with protein) :: 2,998 Genes (RNA) :: 101 rRNAs :: 8, 8, 8 (5S, 16S, 23S) complete rRNAs :: 8, 8, 8 (5S, 16S, 23S) tRNAs :: 73 ncRNAs :: 4 Pseudo Genes (total) :: 30 CDSs (without protein) :: 30 Pseudo Genes (ambiguous residues) :: 0 of 30 Pseudo Genes (frameshifted) :: 7 of 30 Pseudo Genes (incomplete) :: 23 of 30 Pseudo Genes (internal stop) :: 3 of 30 Pseudo Genes (multiple problems) :: 3 of 30 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP007032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 402551 Source DNA and Organism available from Hauke Smidt (hauke.smidt@wur.nl) Source DNA available from Hauke Smidt (hauke.smidt@wur.nl) Organism available from Hauke Smidt (hauke.smidt@wur.nl) Contacts: Hauke Smidt (hauke.smidt@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfitobacterium metallireducens 853-15A, DSM 15288 collection_date :: January 2000 lat_lon :: 36.79499 -108.693466 depth :: 4m country :: USA ref_biomaterial :: ATCC BAA-636, DSM 15288 biotic_relationship :: Free living rel_to_oxygen :: Anaerobe isol_growth_condt :: 12508850 assembly :: Newbler v. 2.5 finishing_strategy :: Level 6: Finished environment :: Sediment; Aquatic sequencing_meth :: WGS GOLD Stamp ID :: Gi08580 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: enriched from anaerobic sediment collected within the floodplain of the San Juan River at the Department of Energy (DOE) uranium mill tailings site in Shiprock, NM, USA. Isolation Comments :: isolated by K. T. Finneran Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Sequencing Depth :: 30x Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.5 Genome Coverage :: 30x Sequencing Technology :: 454; Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/14/2023 00:58:39 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,129 CDSs (total) :: 3,028 Genes (coding) :: 2,998 CDSs (with protein) :: 2,998 Genes (RNA) :: 101 rRNAs :: 8, 8, 8 (5S, 16S, 23S) complete rRNAs :: 8, 8, 8 (5S, 16S, 23S) tRNAs :: 73 ncRNAs :: 4 Pseudo Genes (total) :: 30 CDSs (without protein) :: 30 Pseudo Genes (ambiguous residues) :: 0 of 30 Pseudo Genes (frameshifted) :: 7 of 30 Pseudo Genes (incomplete) :: 23 of 30 Pseudo Genes (internal stop) :: 3 of 30 Pseudo Genes (multiple problems) :: 3 of 30 ##Genome-Annotation-Data-END## COMPLETENESS: full length.