-- dump date 20140619_061409 -- class Genbank::Contig -- table contig_comment -- id comment NC_015388.1 PROVISIONAL REFSEQ: This record has not yet been subject to finalPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.govPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at thePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGFPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANLPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGFPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for thePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by thePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of thisPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborativePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START##PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaeaPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfobacca acetoxidans ASRB2, DSM 11109PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfobacca acetoxidans ASRB2, DSM 11109 collection_date :: MissingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfobacca acetoxidans ASRB2, DSM 11109 collection_date :: Missing lat_lon :: 51.970 5.665PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfobacca acetoxidans ASRB2, DSM 11109 collection_date :: Missing lat_lon :: 51.970 5.665 depth :: MissingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfobacca acetoxidans ASRB2, DSM 11109 collection_date :: Missing lat_lon :: 51.970 5.665 depth :: Missing alt_elev :: MissingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfobacca acetoxidans ASRB2, DSM 11109 collection_date :: Missing lat_lon :: 51.970 5.665 depth :: Missing alt_elev :: Missing country :: NetherlandsPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfobacca acetoxidans ASRB2, DSM 11109 collection_date :: Missing lat_lon :: 51.970 5.665 depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Fresh water, Fresh waterPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfobacca acetoxidans ASRB2, DSM 11109 collection_date :: Missing lat_lon :: 51.970 5.665 depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Fresh water, Fresh water num_replicons :: 1PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfobacca acetoxidans ASRB2, DSM 11109 collection_date :: Missing lat_lon :: 51.970 5.665 depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Fresh water, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 11109, ATCC 700848PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfobacca acetoxidans ASRB2, DSM 11109 collection_date :: Missing lat_lon :: 51.970 5.665 depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Fresh water, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 11109, ATCC 700848 biotic_relationship :: Free livingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfobacca acetoxidans ASRB2, DSM 11109 collection_date :: Missing lat_lon :: 51.970 5.665 depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Fresh water, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 11109, ATCC 700848 biotic_relationship :: Free living trophic_level :: MissingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfobacca acetoxidans ASRB2, DSM 11109 collection_date :: Missing lat_lon :: 51.970 5.665 depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Fresh water, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 11109, ATCC 700848 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: AnaerobePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfobacca acetoxidans ASRB2, DSM 11109 collection_date :: Missing lat_lon :: 51.970 5.665 depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Fresh water, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 11109, ATCC 700848 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 10319454PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfobacca acetoxidans ASRB2, DSM 11109 collection_date :: Missing lat_lon :: 51.970 5.665 depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Fresh water, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 11109, ATCC 700848 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 10319454 sequencing_meth :: WGSPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfobacca acetoxidans ASRB2, DSM 11109 collection_date :: Missing lat_lon :: 51.970 5.665 depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Fresh water, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 11109, ATCC 700848 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 10319454 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfobacca acetoxidans ASRB2, DSM 11109 collection_date :: Missing lat_lon :: 51.970 5.665 depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Fresh water, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 11109, ATCC 700848 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 10319454 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: FinishedPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfobacca acetoxidans ASRB2, DSM 11109 collection_date :: Missing lat_lon :: 51.970 5.665 depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Fresh water, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 11109, ATCC 700848 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 10319454 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi03015PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfobacca acetoxidans ASRB2, DSM 11109 collection_date :: Missing lat_lon :: 51.970 5.665 depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Fresh water, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 11109, ATCC 700848 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 10319454 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi03015 Type Strain :: YesPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfobacca acetoxidans ASRB2, DSM 11109 collection_date :: Missing lat_lon :: 51.970 5.665 depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Fresh water, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 11109, ATCC 700848 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 10319454 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi03015 Type Strain :: Yes Greengenes ID :: 10776PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfobacca acetoxidans ASRB2, DSM 11109 collection_date :: Missing lat_lon :: 51.970 5.665 depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Fresh water, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 11109, ATCC 700848 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 10319454 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi03015 Type Strain :: Yes Greengenes ID :: 10776 Funding Program :: DOE-GEBA 2007PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfobacca acetoxidans ASRB2, DSM 11109 collection_date :: Missing lat_lon :: 51.970 5.665 depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Fresh water, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 11109, ATCC 700848 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 10319454 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi03015 Type Strain :: Yes Greengenes ID :: 10776 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMPPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfobacca acetoxidans ASRB2, DSM 11109 collection_date :: Missing lat_lon :: 51.970 5.665 depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Fresh water, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 11109, ATCC 700848 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 10319454 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi03015 Type Strain :: Yes Greengenes ID :: 10776 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Anaerobic granular sludge of a pilot-scalePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfobacca acetoxidans ASRB2, DSM 11109 collection_date :: Missing lat_lon :: 51.970 5.665 depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Fresh water, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 11109, ATCC 700848 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 10319454 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi03015 Type Strain :: Yes Greengenes ID :: 10776 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Anaerobic granular sludge of a pilot-scale UASB reactor (1.7 1) fed with acetate and anPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfobacca acetoxidans ASRB2, DSM 11109 collection_date :: Missing lat_lon :: 51.970 5.665 depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Fresh water, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 11109, ATCC 700848 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 10319454 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi03015 Type Strain :: Yes Greengenes ID :: 10776 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Anaerobic granular sludge of a pilot-scale UASB reactor (1.7 1) fed with acetate and an excess of sulfate.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfobacca acetoxidans ASRB2, DSM 11109 collection_date :: Missing lat_lon :: 51.970 5.665 depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Fresh water, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 11109, ATCC 700848 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 10319454 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi03015 Type Strain :: Yes Greengenes ID :: 10776 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Anaerobic granular sludge of a pilot-scale UASB reactor (1.7 1) fed with acetate and an excess of sulfate. Isolation Comments :: isolated by S. J. W. H. Oude ElferinkPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfobacca acetoxidans ASRB2, DSM 11109 collection_date :: Missing lat_lon :: 51.970 5.665 depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Fresh water, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 11109, ATCC 700848 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 10319454 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi03015 Type Strain :: Yes Greengenes ID :: 10776 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Anaerobic granular sludge of a pilot-scale UASB reactor (1.7 1) fed with acetate and an excess of sulfate. Isolation Comments :: isolated by S. J. W. H. Oude Elferink Cell Shape :: Oval-shapedPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfobacca acetoxidans ASRB2, DSM 11109 collection_date :: Missing lat_lon :: 51.970 5.665 depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Fresh water, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 11109, ATCC 700848 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 10319454 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi03015 Type Strain :: Yes Greengenes ID :: 10776 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Anaerobic granular sludge of a pilot-scale UASB reactor (1.7 1) fed with acetate and an excess of sulfate. Isolation Comments :: isolated by S. J. W. H. Oude Elferink Cell Shape :: Oval-shaped Motility :: NonmotilePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfobacca acetoxidans ASRB2, DSM 11109 collection_date :: Missing lat_lon :: 51.970 5.665 depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Fresh water, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 11109, ATCC 700848 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 10319454 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi03015 Type Strain :: Yes Greengenes ID :: 10776 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Anaerobic granular sludge of a pilot-scale UASB reactor (1.7 1) fed with acetate and an excess of sulfate. Isolation Comments :: isolated by S. J. W. H. Oude Elferink Cell Shape :: Oval-shaped Motility :: Nonmotile Sporulation :: NonsporulatingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfobacca acetoxidans ASRB2, DSM 11109 collection_date :: Missing lat_lon :: 51.970 5.665 depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Fresh water, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 11109, ATCC 700848 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 10319454 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi03015 Type Strain :: Yes Greengenes ID :: 10776 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Anaerobic granular sludge of a pilot-scale UASB reactor (1.7 1) fed with acetate and an excess of sulfate. Isolation Comments :: isolated by S. J. W. H. Oude Elferink Cell Shape :: Oval-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: MesophilePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfobacca acetoxidans ASRB2, DSM 11109 collection_date :: Missing lat_lon :: 51.970 5.665 depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Fresh water, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 11109, ATCC 700848 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 10319454 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi03015 Type Strain :: Yes Greengenes ID :: 10776 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Anaerobic granular sludge of a pilot-scale UASB reactor (1.7 1) fed with acetate and an excess of sulfate. Isolation Comments :: isolated by S. J. W. H. Oude Elferink Cell Shape :: Oval-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Temperature Optimum :: 37CPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfobacca acetoxidans ASRB2, DSM 11109 collection_date :: Missing lat_lon :: 51.970 5.665 depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Fresh water, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 11109, ATCC 700848 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 10319454 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi03015 Type Strain :: Yes Greengenes ID :: 10776 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Anaerobic granular sludge of a pilot-scale UASB reactor (1.7 1) fed with acetate and an excess of sulfate. Isolation Comments :: isolated by S. J. W. H. Oude Elferink Cell Shape :: Oval-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram-PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfobacca acetoxidans ASRB2, DSM 11109 collection_date :: Missing lat_lon :: 51.970 5.665 depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Fresh water, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 11109, ATCC 700848 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 10319454 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi03015 Type Strain :: Yes Greengenes ID :: 10776 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Anaerobic granular sludge of a pilot-scale UASB reactor (1.7 1) fed with acetate and an excess of sulfate. Isolation Comments :: isolated by S. J. W. H. Oude Elferink Cell Shape :: Oval-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram- ##MIGS-Data-END##PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfobacca acetoxidans ASRB2, DSM 11109 collection_date :: Missing lat_lon :: 51.970 5.665 depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Fresh water, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 11109, ATCC 700848 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 10319454 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi03015 Type Strain :: Yes Greengenes ID :: 10776 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Anaerobic granular sludge of a pilot-scale UASB reactor (1.7 1) fed with acetate and an excess of sulfate. Isolation Comments :: isolated by S. J. W. H. Oude Elferink Cell Shape :: Oval-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START##PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfobacca acetoxidans ASRB2, DSM 11109 collection_date :: Missing lat_lon :: 51.970 5.665 depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Fresh water, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 11109, ATCC 700848 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 10319454 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi03015 Type Strain :: Yes Greengenes ID :: 10776 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Anaerobic granular sludge of a pilot-scale UASB reactor (1.7 1) fed with acetate and an excess of sulfate. Isolation Comments :: isolated by S. J. W. H. Oude Elferink Cell Shape :: Oval-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: FinishedPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfobacca acetoxidans ASRB2, DSM 11109 collection_date :: Missing lat_lon :: 51.970 5.665 depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Fresh water, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 11109, ATCC 700848 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 10319454 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi03015 Type Strain :: Yes Greengenes ID :: 10776 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Anaerobic granular sludge of a pilot-scale UASB reactor (1.7 1) fed with acetate and an excess of sulfate. Isolation Comments :: isolated by S. J. W. H. Oude Elferink Cell Shape :: Oval-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: FinishedPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfobacca acetoxidans ASRB2, DSM 11109 collection_date :: Missing lat_lon :: 51.970 5.665 depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Fresh water, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 11109, ATCC 700848 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 10319454 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi03015 Type Strain :: Yes Greengenes ID :: 10776 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Anaerobic granular sludge of a pilot-scale UASB reactor (1.7 1) fed with acetate and an excess of sulfate. Isolation Comments :: isolated by S. J. W. H. Oude Elferink Cell Shape :: Oval-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfobacca acetoxidans ASRB2, DSM 11109 collection_date :: Missing lat_lon :: 51.970 5.665 depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Fresh water, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 11109, ATCC 700848 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 10319454 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi03015 Type Strain :: Yes Greengenes ID :: 10776 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Anaerobic granular sludge of a pilot-scale UASB reactor (1.7 1) fed with acetate and an excess of sulfate. Isolation Comments :: isolated by S. J. W. H. Oude Elferink Cell Shape :: Oval-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30xPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfobacca acetoxidans ASRB2, DSM 11109 collection_date :: Missing lat_lon :: 51.970 5.665 depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Fresh water, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 11109, ATCC 700848 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 10319454 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi03015 Type Strain :: Yes Greengenes ID :: 10776 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Anaerobic granular sludge of a pilot-scale UASB reactor (1.7 1) fed with acetate and an excess of sulfate. Isolation Comments :: isolated by S. J. W. H. Oude Elferink Cell Shape :: Oval-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/IlluminaPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfobacca acetoxidans ASRB2, DSM 11109 collection_date :: Missing lat_lon :: 51.970 5.665 depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Fresh water, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 11109, ATCC 700848 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 10319454 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi03015 Type Strain :: Yes Greengenes ID :: 10776 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Anaerobic granular sludge of a pilot-scale UASB reactor (1.7 1) fed with acetate and an excess of sulfate. Isolation Comments :: isolated by S. J. W. H. Oude Elferink Cell Shape :: Oval-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END##PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002629. URL -- http://www.jgi.doe.gov JGI Project ID: 4087663 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Desulfobacca acetoxidans ASRB2, DSM 11109 collection_date :: Missing lat_lon :: 51.970 5.665 depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Fresh water, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 11109, ATCC 700848 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 10319454 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi03015 Type Strain :: Yes Greengenes ID :: 10776 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Anaerobic granular sludge of a pilot-scale UASB reactor (1.7 1) fed with acetate and an excess of sulfate. Isolation Comments :: isolated by S. J. W. H. Oude Elferink Cell Shape :: Oval-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## COMPLETENESS: full length.