-- dump date   	20240506_004702
-- class       	Genbank::Contig
-- table       	contig_comment
-- id	comment
NC_016629.1	REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP003221.1.REFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak RidgeREFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory).REFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaeaREFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis BayREFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951REFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, SoilREFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1REFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397REFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free livingREFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: AnaerobeREFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Anaerobe isol_growth_condt   :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGSREFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release)REFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi03062REFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi03062 Type Strain         :: NoREFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi03062 Type Strain         :: No Greengenes ID       :: 283392REFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi03062 Type Strain         :: No Greengenes ID       :: 283392 Funding Program     :: DOE-LSP 2007REFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi03062 Type Strain         :: No Greengenes ID       :: 283392 Funding Program     :: DOE-LSP 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMPREFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi03062 Type Strain         :: No Greengenes ID       :: 283392 Funding Program     :: DOE-LSP 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: marine mud after eruption of submarineREFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi03062 Type Strain         :: No Greengenes ID       :: 283392 Funding Program     :: DOE-LSP 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: marine mud after eruption of submarine                        hydrogen sulfideREFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi03062 Type Strain         :: No Greengenes ID       :: 283392 Funding Program     :: DOE-LSP 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: marine mud after eruption of submarine                        hydrogen sulfide Isolation Comments  :: isolated by M.E. AdamsREFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi03062 Type Strain         :: No Greengenes ID       :: 283392 Funding Program     :: DOE-LSP 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: marine mud after eruption of submarine                        hydrogen sulfide Isolation Comments  :: isolated by M.E. Adams Cell Shape          :: Rod-shapedREFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi03062 Type Strain         :: No Greengenes ID       :: 283392 Funding Program     :: DOE-LSP 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: marine mud after eruption of submarine                        hydrogen sulfide Isolation Comments  :: isolated by M.E. Adams Cell Shape          :: Rod-shaped Motility            :: MotileREFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi03062 Type Strain         :: No Greengenes ID       :: 283392 Funding Program     :: DOE-LSP 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: marine mud after eruption of submarine                        hydrogen sulfide Isolation Comments  :: isolated by M.E. Adams Cell Shape          :: Rod-shaped Motility            :: Motile Temperature Range   :: MesophileREFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi03062 Type Strain         :: No Greengenes ID       :: 283392 Funding Program     :: DOE-LSP 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: marine mud after eruption of submarine                        hydrogen sulfide Isolation Comments  :: isolated by M.E. Adams Cell Shape          :: Rod-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 30CREFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi03062 Type Strain         :: No Greengenes ID       :: 283392 Funding Program     :: DOE-LSP 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: marine mud after eruption of submarine                        hydrogen sulfide Isolation Comments  :: isolated by M.E. Adams Cell Shape          :: Rod-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 30C Gram Staining       :: Gram-REFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi03062 Type Strain         :: No Greengenes ID       :: 283392 Funding Program     :: DOE-LSP 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: marine mud after eruption of submarine                        hydrogen sulfide Isolation Comments  :: isolated by M.E. Adams Cell Shape          :: Rod-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 30C Gram Staining       :: Gram- ##MIGS-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi03062 Type Strain         :: No Greengenes ID       :: 283392 Funding Program     :: DOE-LSP 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: marine mud after eruption of submarine                        hydrogen sulfide Isolation Comments  :: isolated by M.E. Adams Cell Shape          :: Rod-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 30C Gram Staining       :: Gram- ##MIGS-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi03062 Type Strain         :: No Greengenes ID       :: 283392 Funding Program     :: DOE-LSP 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: marine mud after eruption of submarine                        hydrogen sulfide Isolation Comments  :: isolated by M.E. Adams Cell Shape          :: Rod-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 30C Gram Staining       :: Gram- ##MIGS-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi03062 Type Strain         :: No Greengenes ID       :: 283392 Funding Program     :: DOE-LSP 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: marine mud after eruption of submarine                        hydrogen sulfide Isolation Comments  :: isolated by M.E. Adams Cell Shape          :: Rod-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 30C Gram Staining       :: Gram- ##MIGS-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000212675.2-RS_2024_03_28REFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi03062 Type Strain         :: No Greengenes ID       :: 283392 Funding Program     :: DOE-LSP 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: marine mud after eruption of submarine                        hydrogen sulfide Isolation Comments  :: isolated by M.E. Adams Cell Shape          :: Rod-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 30C Gram Staining       :: Gram- ##MIGS-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000212675.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 01:02:29REFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi03062 Type Strain         :: No Greengenes ID       :: 283392 Funding Program     :: DOE-LSP 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: marine mud after eruption of submarine                        hydrogen sulfide Isolation Comments  :: isolated by M.E. Adams Cell Shape          :: Rod-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 30C Gram Staining       :: Gram- ##MIGS-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000212675.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 01:02:29 Annotation Pipeline               :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi03062 Type Strain         :: No Greengenes ID       :: 283392 Funding Program     :: DOE-LSP 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: marine mud after eruption of submarine                        hydrogen sulfide Isolation Comments  :: isolated by M.E. Adams Cell Shape          :: Rod-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 30C Gram Staining       :: Gram- ##MIGS-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000212675.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 01:02:29 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi03062 Type Strain         :: No Greengenes ID       :: 283392 Funding Program     :: DOE-LSP 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: marine mud after eruption of submarine                        hydrogen sulfide Isolation Comments  :: isolated by M.E. Adams Cell Shape          :: Rod-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 30C Gram Staining       :: Gram- ##MIGS-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000212675.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 01:02:29 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi03062 Type Strain         :: No Greengenes ID       :: 283392 Funding Program     :: DOE-LSP 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: marine mud after eruption of submarine                        hydrogen sulfide Isolation Comments  :: isolated by M.E. Adams Cell Shape          :: Rod-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 30C Gram Staining       :: Gram- ##MIGS-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000212675.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 01:02:29 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi03062 Type Strain         :: No Greengenes ID       :: 283392 Funding Program     :: DOE-LSP 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: marine mud after eruption of submarine                        hydrogen sulfide Isolation Comments  :: isolated by M.E. Adams Cell Shape          :: Rod-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 30C Gram Staining       :: Gram- ##MIGS-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000212675.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 01:02:29 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7REFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi03062 Type Strain         :: No Greengenes ID       :: 283392 Funding Program     :: DOE-LSP 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: marine mud after eruption of submarine                        hydrogen sulfide Isolation Comments  :: isolated by M.E. Adams Cell Shape          :: Rod-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 30C Gram Staining       :: Gram- ##MIGS-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000212675.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 01:02:29 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi03062 Type Strain         :: No Greengenes ID       :: 283392 Funding Program     :: DOE-LSP 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: marine mud after eruption of submarine                        hydrogen sulfide Isolation Comments  :: isolated by M.E. Adams Cell Shape          :: Rod-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 30C Gram Staining       :: Gram- ##MIGS-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000212675.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 01:02:29 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,864REFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi03062 Type Strain         :: No Greengenes ID       :: 283392 Funding Program     :: DOE-LSP 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: marine mud after eruption of submarine                        hydrogen sulfide Isolation Comments  :: isolated by M.E. Adams Cell Shape          :: Rod-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 30C Gram Staining       :: Gram- ##MIGS-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000212675.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 01:02:29 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,864 CDSs (total)                      :: 3,793REFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi03062 Type Strain         :: No Greengenes ID       :: 283392 Funding Program     :: DOE-LSP 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: marine mud after eruption of submarine                        hydrogen sulfide Isolation Comments  :: isolated by M.E. Adams Cell Shape          :: Rod-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 30C Gram Staining       :: Gram- ##MIGS-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000212675.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 01:02:29 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,864 CDSs (total)                      :: 3,793 Genes (coding)                    :: 3,769REFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi03062 Type Strain         :: No Greengenes ID       :: 283392 Funding Program     :: DOE-LSP 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: marine mud after eruption of submarine                        hydrogen sulfide Isolation Comments  :: isolated by M.E. Adams Cell Shape          :: Rod-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 30C Gram Staining       :: Gram- ##MIGS-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000212675.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 01:02:29 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,864 CDSs (total)                      :: 3,793 Genes (coding)                    :: 3,769 CDSs (with protein)               :: 3,769REFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi03062 Type Strain         :: No Greengenes ID       :: 283392 Funding Program     :: DOE-LSP 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: marine mud after eruption of submarine                        hydrogen sulfide Isolation Comments  :: isolated by M.E. Adams Cell Shape          :: Rod-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 30C Gram Staining       :: Gram- ##MIGS-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000212675.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 01:02:29 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,864 CDSs (total)                      :: 3,793 Genes (coding)                    :: 3,769 CDSs (with protein)               :: 3,769 Genes (RNA)                       :: 71REFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi03062 Type Strain         :: No Greengenes ID       :: 283392 Funding Program     :: DOE-LSP 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: marine mud after eruption of submarine                        hydrogen sulfide Isolation Comments  :: isolated by M.E. Adams Cell Shape          :: Rod-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 30C Gram Staining       :: Gram- ##MIGS-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000212675.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 01:02:29 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,864 CDSs (total)                      :: 3,793 Genes (coding)                    :: 3,769 CDSs (with protein)               :: 3,769 Genes (RNA)                       :: 71 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi03062 Type Strain         :: No Greengenes ID       :: 283392 Funding Program     :: DOE-LSP 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: marine mud after eruption of submarine                        hydrogen sulfide Isolation Comments  :: isolated by M.E. Adams Cell Shape          :: Rod-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 30C Gram Staining       :: Gram- ##MIGS-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000212675.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 01:02:29 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,864 CDSs (total)                      :: 3,793 Genes (coding)                    :: 3,769 CDSs (with protein)               :: 3,769 Genes (RNA)                       :: 71 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi03062 Type Strain         :: No Greengenes ID       :: 283392 Funding Program     :: DOE-LSP 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: marine mud after eruption of submarine                        hydrogen sulfide Isolation Comments  :: isolated by M.E. Adams Cell Shape          :: Rod-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 30C Gram Staining       :: Gram- ##MIGS-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000212675.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 01:02:29 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,864 CDSs (total)                      :: 3,793 Genes (coding)                    :: 3,769 CDSs (with protein)               :: 3,769 Genes (RNA)                       :: 71 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 57REFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi03062 Type Strain         :: No Greengenes ID       :: 283392 Funding Program     :: DOE-LSP 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: marine mud after eruption of submarine                        hydrogen sulfide Isolation Comments  :: isolated by M.E. Adams Cell Shape          :: Rod-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 30C Gram Staining       :: Gram- ##MIGS-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000212675.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 01:02:29 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,864 CDSs (total)                      :: 3,793 Genes (coding)                    :: 3,769 CDSs (with protein)               :: 3,769 Genes (RNA)                       :: 71 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 57 ncRNAs                            :: 5REFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi03062 Type Strain         :: No Greengenes ID       :: 283392 Funding Program     :: DOE-LSP 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: marine mud after eruption of submarine                        hydrogen sulfide Isolation Comments  :: isolated by M.E. Adams Cell Shape          :: Rod-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 30C Gram Staining       :: Gram- ##MIGS-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000212675.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 01:02:29 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,864 CDSs (total)                      :: 3,793 Genes (coding)                    :: 3,769 CDSs (with protein)               :: 3,769 Genes (RNA)                       :: 71 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 57 ncRNAs                            :: 5 Pseudo Genes (total)              :: 24REFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi03062 Type Strain         :: No Greengenes ID       :: 283392 Funding Program     :: DOE-LSP 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: marine mud after eruption of submarine                        hydrogen sulfide Isolation Comments  :: isolated by M.E. Adams Cell Shape          :: Rod-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 30C Gram Staining       :: Gram- ##MIGS-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000212675.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 01:02:29 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,864 CDSs (total)                      :: 3,793 Genes (coding)                    :: 3,769 CDSs (with protein)               :: 3,769 Genes (RNA)                       :: 71 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 57 ncRNAs                            :: 5 Pseudo Genes (total)              :: 24 CDSs (without protein)            :: 24REFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi03062 Type Strain         :: No Greengenes ID       :: 283392 Funding Program     :: DOE-LSP 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: marine mud after eruption of submarine                        hydrogen sulfide Isolation Comments  :: isolated by M.E. Adams Cell Shape          :: Rod-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 30C Gram Staining       :: Gram- ##MIGS-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000212675.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 01:02:29 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,864 CDSs (total)                      :: 3,793 Genes (coding)                    :: 3,769 CDSs (with protein)               :: 3,769 Genes (RNA)                       :: 71 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 57 ncRNAs                            :: 5 Pseudo Genes (total)              :: 24 CDSs (without protein)            :: 24 Pseudo Genes (ambiguous residues) :: 0 of 24REFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi03062 Type Strain         :: No Greengenes ID       :: 283392 Funding Program     :: DOE-LSP 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: marine mud after eruption of submarine                        hydrogen sulfide Isolation Comments  :: isolated by M.E. Adams Cell Shape          :: Rod-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 30C Gram Staining       :: Gram- ##MIGS-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000212675.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 01:02:29 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,864 CDSs (total)                      :: 3,793 Genes (coding)                    :: 3,769 CDSs (with protein)               :: 3,769 Genes (RNA)                       :: 71 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 57 ncRNAs                            :: 5 Pseudo Genes (total)              :: 24 CDSs (without protein)            :: 24 Pseudo Genes (ambiguous residues) :: 0 of 24 Pseudo Genes (frameshifted)       :: 12 of 24REFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi03062 Type Strain         :: No Greengenes ID       :: 283392 Funding Program     :: DOE-LSP 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: marine mud after eruption of submarine                        hydrogen sulfide Isolation Comments  :: isolated by M.E. Adams Cell Shape          :: Rod-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 30C Gram Staining       :: Gram- ##MIGS-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000212675.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 01:02:29 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,864 CDSs (total)                      :: 3,793 Genes (coding)                    :: 3,769 CDSs (with protein)               :: 3,769 Genes (RNA)                       :: 71 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 57 ncRNAs                            :: 5 Pseudo Genes (total)              :: 24 CDSs (without protein)            :: 24 Pseudo Genes (ambiguous residues) :: 0 of 24 Pseudo Genes (frameshifted)       :: 12 of 24 Pseudo Genes (incomplete)         :: 15 of 24REFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi03062 Type Strain         :: No Greengenes ID       :: 283392 Funding Program     :: DOE-LSP 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: marine mud after eruption of submarine                        hydrogen sulfide Isolation Comments  :: isolated by M.E. Adams Cell Shape          :: Rod-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 30C Gram Staining       :: Gram- ##MIGS-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000212675.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 01:02:29 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,864 CDSs (total)                      :: 3,793 Genes (coding)                    :: 3,769 CDSs (with protein)               :: 3,769 Genes (RNA)                       :: 71 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 57 ncRNAs                            :: 5 Pseudo Genes (total)              :: 24 CDSs (without protein)            :: 24 Pseudo Genes (ambiguous residues) :: 0 of 24 Pseudo Genes (frameshifted)       :: 12 of 24 Pseudo Genes (incomplete)         :: 15 of 24 Pseudo Genes (internal stop)      :: 6 of 24REFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi03062 Type Strain         :: No Greengenes ID       :: 283392 Funding Program     :: DOE-LSP 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: marine mud after eruption of submarine                        hydrogen sulfide Isolation Comments  :: isolated by M.E. Adams Cell Shape          :: Rod-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 30C Gram Staining       :: Gram- ##MIGS-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000212675.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 01:02:29 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,864 CDSs (total)                      :: 3,793 Genes (coding)                    :: 3,769 CDSs (with protein)               :: 3,769 Genes (RNA)                       :: 71 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 57 ncRNAs                            :: 5 Pseudo Genes (total)              :: 24 CDSs (without protein)            :: 24 Pseudo Genes (ambiguous residues) :: 0 of 24 Pseudo Genes (frameshifted)       :: 12 of 24 Pseudo Genes (incomplete)         :: 15 of 24 Pseudo Genes (internal stop)      :: 6 of 24 Pseudo Genes (multiple problems)  :: 6 of 24REFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi03062 Type Strain         :: No Greengenes ID       :: 283392 Funding Program     :: DOE-LSP 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: marine mud after eruption of submarine                        hydrogen sulfide Isolation Comments  :: isolated by M.E. Adams Cell Shape          :: Rod-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 30C Gram Staining       :: Gram- ##MIGS-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000212675.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 01:02:29 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,864 CDSs (total)                      :: 3,793 Genes (coding)                    :: 3,769 CDSs (with protein)               :: 3,769 Genes (RNA)                       :: 71 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 57 ncRNAs                            :: 5 Pseudo Genes (total)              :: 24 CDSs (without protein)            :: 24 Pseudo Genes (ambiguous residues) :: 0 of 24 Pseudo Genes (frameshifted)       :: 12 of 24 Pseudo Genes (incomplete)         :: 15 of 24 Pseudo Genes (internal stop)      :: 6 of 24 Pseudo Genes (multiple problems)  :: 6 of 24 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP003221.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA and organism available from Steven D. Brown (Oak Ridge National Laboratory). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfovibrio africanus Walvis Bay collection_date     :: 26 Feb 1951 lat_lon             :: Missing depth               :: Missing alt_elev            :: Missing country             :: Missing environment         :: Sea water, Fresh water, Soil num_replicons       :: 1 ref_biomaterial     :: ATCC 19997, NCIB 8397 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi03062 Type Strain         :: No Greengenes ID       :: 283392 Funding Program     :: DOE-LSP 2007 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: marine mud after eruption of submarine                        hydrogen sulfide Isolation Comments  :: isolated by M.E. Adams Cell Shape          :: Rod-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 30C Gram Staining       :: Gram- ##MIGS-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000212675.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 01:02:29 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,864 CDSs (total)                      :: 3,793 Genes (coding)                    :: 3,769 CDSs (with protein)               :: 3,769 Genes (RNA)                       :: 71 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 57 ncRNAs                            :: 5 Pseudo Genes (total)              :: 24 CDSs (without protein)            :: 24 Pseudo Genes (ambiguous residues) :: 0 of 24 Pseudo Genes (frameshifted)       :: 12 of 24 Pseudo Genes (incomplete)         :: 15 of 24 Pseudo Genes (internal stop)      :: 6 of 24 Pseudo Genes (multiple problems)  :: 6 of 24 ##Genome-Annotation-Data-END## COMPLETENESS: full length.