-- dump date   	20140619_063259
-- class       	Genbank::Contig
-- table       	contig_comment
-- id	comment
NC_018066.1	PROVISIONAL REFSEQ: This record has not yet been subject to finalPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.govPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander LoyPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGFPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNLPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for thePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by thePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of thisPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborativePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START##PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaeaPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: MissingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: MissingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: FrancePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, SoilPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free livingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: MissingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: MissingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGSPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPSPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: FinishedPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shapedPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: MotilePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: Motile Sporulation         :: SporulatingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: Motile Sporulation         :: Sporulating Temperature Range   :: MesophilePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: Motile Sporulation         :: Sporulating Temperature Range   :: Mesophile Temperature Optimum :: 37CPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: Motile Sporulation         :: Sporulating Temperature Range   :: Mesophile Temperature Optimum :: 37C Gram Staining       :: Gram-PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: Motile Sporulation         :: Sporulating Temperature Range   :: Mesophile Temperature Optimum :: 37C Gram Staining       :: Gram- Diseases            :: NonePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: Motile Sporulation         :: Sporulating Temperature Range   :: Mesophile Temperature Optimum :: 37C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END##PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: Motile Sporulation         :: Sporulating Temperature Range   :: Mesophile Temperature Optimum :: 37C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START##PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: Motile Sporulation         :: Sporulating Temperature Range   :: Mesophile Temperature Optimum :: 37C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: FinishedPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: Motile Sporulation         :: Sporulating Temperature Range   :: Mesophile Temperature Optimum :: 37C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: FinishedPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: Motile Sporulation         :: Sporulating Temperature Range   :: Mesophile Temperature Optimum :: 37C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 (pre-release), VELVET v.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: Motile Sporulation         :: Sporulating Temperature Range   :: Mesophile Temperature Optimum :: 37C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 (pre-release), VELVET v.                             1.0.13, Parallel phrap v. 4.24 SPSPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: Motile Sporulation         :: Sporulating Temperature Range   :: Mesophile Temperature Optimum :: 37C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 (pre-release), VELVET v.                             1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage          :: 30xPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: Motile Sporulation         :: Sporulating Temperature Range   :: Mesophile Temperature Optimum :: 37C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 (pre-release), VELVET v.                             1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage          :: 30x Sequencing Technology    :: 454/IlluminaPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: Motile Sporulation         :: Sporulating Temperature Range   :: Mesophile Temperature Optimum :: 37C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 (pre-release), VELVET v.                             1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage          :: 30x Sequencing Technology    :: 454/Illumina ##Genome-Assembly-Data-END##PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003640. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: Motile Sporulation         :: Sporulating Temperature Range   :: Mesophile Temperature Optimum :: 37C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 (pre-release), VELVET v.                             1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage          :: 30x Sequencing Technology    :: 454/Illumina ##Genome-Assembly-Data-END## COMPLETENESS: full length.
NC_018067.1	PROVISIONAL REFSEQ: This record has not yet been subject to finalPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.govPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander LoyPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGFPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNLPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for thePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by thePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of thisPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborativePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START##PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaeaPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: MissingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: MissingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: FrancePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, SoilPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free livingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: MissingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: MissingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGSPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPSPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: FinishedPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shapedPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: MotilePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: Motile Sporulation         :: SporulatingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: Motile Sporulation         :: Sporulating Temperature Range   :: MesophilePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: Motile Sporulation         :: Sporulating Temperature Range   :: Mesophile Temperature Optimum :: 37CPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: Motile Sporulation         :: Sporulating Temperature Range   :: Mesophile Temperature Optimum :: 37C Gram Staining       :: Gram-PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: Motile Sporulation         :: Sporulating Temperature Range   :: Mesophile Temperature Optimum :: 37C Gram Staining       :: Gram- Diseases            :: NonePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: Motile Sporulation         :: Sporulating Temperature Range   :: Mesophile Temperature Optimum :: 37C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END##PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: Motile Sporulation         :: Sporulating Temperature Range   :: Mesophile Temperature Optimum :: 37C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START##PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: Motile Sporulation         :: Sporulating Temperature Range   :: Mesophile Temperature Optimum :: 37C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: FinishedPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: Motile Sporulation         :: Sporulating Temperature Range   :: Mesophile Temperature Optimum :: 37C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: FinishedPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: Motile Sporulation         :: Sporulating Temperature Range   :: Mesophile Temperature Optimum :: 37C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 (pre-release), VELVET v.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: Motile Sporulation         :: Sporulating Temperature Range   :: Mesophile Temperature Optimum :: 37C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 (pre-release), VELVET v.                             1.0.13, Parallel phrap v. 4.24 SPSPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: Motile Sporulation         :: Sporulating Temperature Range   :: Mesophile Temperature Optimum :: 37C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 (pre-release), VELVET v.                             1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage          :: 30xPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: Motile Sporulation         :: Sporulating Temperature Range   :: Mesophile Temperature Optimum :: 37C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 (pre-release), VELVET v.                             1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage          :: 30x Sequencing Technology    :: 454/IlluminaPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: Motile Sporulation         :: Sporulating Temperature Range   :: Mesophile Temperature Optimum :: 37C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 (pre-release), VELVET v.                             1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage          :: 30x Sequencing Technology    :: 454/Illumina ##Genome-Assembly-Data-END##PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003641. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: Motile Sporulation         :: Sporulating Temperature Range   :: Mesophile Temperature Optimum :: 37C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 (pre-release), VELVET v.                             1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage          :: 30x Sequencing Technology    :: 454/Illumina ##Genome-Assembly-Data-END## COMPLETENESS: full length.
NC_018068.1	PROVISIONAL REFSEQ: This record has not yet been subject to finalPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.govPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander LoyPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGFPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNLPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for thePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by thePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of thisPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborativePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START##PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaeaPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: MissingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: MissingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: FrancePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, SoilPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free livingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: MissingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: MissingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGSPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPSPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: FinishedPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shapedPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: MotilePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: Motile Sporulation         :: SporulatingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: Motile Sporulation         :: Sporulating Temperature Range   :: MesophilePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: Motile Sporulation         :: Sporulating Temperature Range   :: Mesophile Temperature Optimum :: 37CPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: Motile Sporulation         :: Sporulating Temperature Range   :: Mesophile Temperature Optimum :: 37C Gram Staining       :: Gram-PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: Motile Sporulation         :: Sporulating Temperature Range   :: Mesophile Temperature Optimum :: 37C Gram Staining       :: Gram- Diseases            :: NonePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: Motile Sporulation         :: Sporulating Temperature Range   :: Mesophile Temperature Optimum :: 37C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END##PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: Motile Sporulation         :: Sporulating Temperature Range   :: Mesophile Temperature Optimum :: 37C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START##PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: Motile Sporulation         :: Sporulating Temperature Range   :: Mesophile Temperature Optimum :: 37C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: FinishedPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: Motile Sporulation         :: Sporulating Temperature Range   :: Mesophile Temperature Optimum :: 37C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: FinishedPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: Motile Sporulation         :: Sporulating Temperature Range   :: Mesophile Temperature Optimum :: 37C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 (pre-release), VELVET v.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: Motile Sporulation         :: Sporulating Temperature Range   :: Mesophile Temperature Optimum :: 37C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 (pre-release), VELVET v.                             1.0.13, Parallel phrap v. 4.24 SPSPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: Motile Sporulation         :: Sporulating Temperature Range   :: Mesophile Temperature Optimum :: 37C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 (pre-release), VELVET v.                             1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage          :: 30xPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: Motile Sporulation         :: Sporulating Temperature Range   :: Mesophile Temperature Optimum :: 37C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 (pre-release), VELVET v.                             1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage          :: 30x Sequencing Technology    :: 454/IlluminaPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: Motile Sporulation         :: Sporulating Temperature Range   :: Mesophile Temperature Optimum :: 37C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 (pre-release), VELVET v.                             1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage          :: 30x Sequencing Technology    :: 454/Illumina ##Genome-Assembly-Data-END##PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003639. URL -- http://www.jgi.doe.gov JGI Project ID: 4092115 Source DNA and Organism available from Alexander Loy (loy@microbial-ecology.net) Contacts: Alexander Loy (loy@microbial-ecology.net)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Desulfosporosinus acidiphilus SJ4, DSM 22704 collection_date     :: 2010 lat_lon             :: 45.888783 4.605968 depth               :: Missing alt_elev            :: Missing country             :: France environment         :: Acid mine, Fresh water, Mud, Sea water, Soil num_replicons       :: 3 ref_biomaterial     :: DSM 22704 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Obligate anaerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release), VELVET v.                        1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy  :: Finished GOLD Stamp ID       :: Gi08592 Funding Program     :: DOE-CSP 2010 Gene Calling Method :: GenePrimp, Prodigal1.4 Isolation Site      :: Acid mining effluent decantation pond;                        France, Chessy les Mines. Isolation Comments  :: isolated by Alazard et al. Cell Shape          :: Rod-shaped Motility            :: Motile Sporulation         :: Sporulating Temperature Range   :: Mesophile Temperature Optimum :: 37C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 (pre-release), VELVET v.                             1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage          :: 30x Sequencing Technology    :: 454/Illumina ##Genome-Assembly-Data-END## COMPLETENESS: full length.