-- dump date 20111121_011747 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 535289000001 SEQ_END SEQ_END NC_011992.1 3796573 3796573 DR NC_011992.1; contig end 3796573..3796573 Acidovorax ebreus TPSY YP_002551490.1 CDS dnaA NC_011992.1 70 1491 D binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 70..1491 Acidovorax ebreus TPSY 7384672 YP_002551491.1 CDS Dtpsy_0002 NC_011992.1 1636 2742 D KEGG: ajs:Ajs_4145 DNA polymerase III, beta subunit; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain; SMART: DNA polymerase III beta chain; DNA polymerase III, beta subunit 1636..2742 Acidovorax ebreus TPSY 7382693 YP_002551492.1 CDS Dtpsy_0003 NC_011992.1 2860 5466 D KEGG: ajs:Ajs_4146 DNA gyrase subunit B; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase subunit B domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA topoisomerase type IIA subunit B region 2 domain protein; SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; DNA gyrase, B subunit 2860..5466 Acidovorax ebreus TPSY 7382694 YP_002551493.1 CDS Dtpsy_0004 NC_011992.1 5621 5854 R KEGG: ajs:Ajs_4147 hypothetical protein; hypothetical protein complement(5621..5854) Acidovorax ebreus TPSY 7382695 YP_002551494.1 CDS Dtpsy_0005 NC_011992.1 6024 6545 D PFAM: GCN5-related N-acetyltransferase; KEGG: ajs:Ajs_4148 GCN5-related N-acetyltransferase; GCN5-related N-acetyltransferase 6024..6545 Acidovorax ebreus TPSY 7382696 YP_002551495.1 CDS Dtpsy_0006 NC_011992.1 6542 6955 D PFAM: protein of unknown function UPF0153; KEGG: ajs:Ajs_4149 hypothetical protein; protein of unknown function UPF0153 6542..6955 Acidovorax ebreus TPSY 7382697 YP_002551496.1 CDS Dtpsy_0007 NC_011992.1 7062 7499 D TIGRFAM: OsmC family protein; PFAM: OsmC family protein; KEGG: ajs:Ajs_4150 OsmC family protein; OsmC family protein 7062..7499 Acidovorax ebreus TPSY 7382698 YP_002551497.1 CDS Dtpsy_0008 NC_011992.1 7511 8275 D PFAM: protein of unknown function DUF72; KEGG: ajs:Ajs_4151 hypothetical protein; protein of unknown function DUF72 7511..8275 Acidovorax ebreus TPSY 7382699 YP_002551498.1 CDS Dtpsy_0009 NC_011992.1 8362 8655 R PFAM: acylphosphatase; KEGG: ajs:Ajs_4152 acylphosphatase; acylphosphatase complement(8362..8655) Acidovorax ebreus TPSY 7382700 YP_002551499.1 CDS Dtpsy_0010 NC_011992.1 8696 8929 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ajs:Ajs_4153 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein 8696..8929 Acidovorax ebreus TPSY 7382701 YP_002551500.1 CDS Dtpsy_0011 NC_011992.1 8991 10586 D PFAM: gamma-glutamyltranspeptidase; KEGG: ajs:Ajs_4154 gamma-glutamyltransferase 2; Gamma-glutamyltransferase 8991..10586 Acidovorax ebreus TPSY 7382702 YP_002551501.1 CDS Dtpsy_0012 NC_011992.1 10940 12358 D catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 10940..12358 Acidovorax ebreus TPSY 7382703 YP_002551502.1 CDS Dtpsy_0013 NC_011992.1 12411 12719 R KEGG: ajs:Ajs_4156 hypothetical protein; hypothetical protein complement(12411..12719) Acidovorax ebreus TPSY 7382704 YP_002551503.1 CDS dinG NC_011992.1 12968 15157 D helicase involved in DNA repair and perhaps also replication; ATP-dependent DNA helicase DinG 12968..15157 Acidovorax ebreus TPSY 7382705 YP_002551504.1 CDS Dtpsy_0015 NC_011992.1 15342 15539 D KEGG: ajs:Ajs_4159 hypothetical protein; hypothetical protein 15342..15539 Acidovorax ebreus TPSY 7382706 YP_002551505.1 CDS Dtpsy_0016 NC_011992.1 15687 16343 D KEGG: ajs:Ajs_4160 DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; DNA-directed DNA polymerase 15687..16343 Acidovorax ebreus TPSY 7382707 YP_002551506.1 CDS Dtpsy_0017 NC_011992.1 16551 17057 D PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: ajs:Ajs_4161 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-related FMN-binding 16551..17057 Acidovorax ebreus TPSY 7382708 YP_002551507.1 CDS Dtpsy_0018 NC_011992.1 17352 18680 R PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: ajs:Ajs_4162 GntR family transcriptional regulator; transcriptional regulator, GntR family with aminotransferase domain complement(17352..18680) Acidovorax ebreus TPSY 7382709 YP_002551508.1 CDS Dtpsy_0019 NC_011992.1 18899 19381 D PFAM: NLP/P60 protein; KEGG: ajs:Ajs_0001 NLP/P60 protein; NLP/P60 protein 18899..19381 Acidovorax ebreus TPSY 7382710 YP_002551509.1 CDS Dtpsy_0020 NC_011992.1 19509 20609 D catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 19509..20609 Acidovorax ebreus TPSY 7382711 YP_002551510.1 CDS Dtpsy_0021 NC_011992.1 20851 24528 D KEGG: aav:Aave_0022 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; GGDEF domain containing protein; EAL domain protein; GAF domain protein; diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) 20851..24528 Acidovorax ebreus TPSY 7382712 YP_002551511.1 CDS Dtpsy_0022 NC_011992.1 24586 25389 R PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: ajs:Ajs_0004 regulatory proteins, IclR; transcriptional regulator, IclR family complement(24586..25389) Acidovorax ebreus TPSY 7382713 YP_002551512.1 CDS Dtpsy_0023 NC_011992.1 25632 26603 D PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0005 hypothetical protein; hypothetical protein 25632..26603 Acidovorax ebreus TPSY 7382714 YP_002551513.1 CDS Dtpsy_0024 NC_011992.1 26942 27547 R KEGG: ajs:Ajs_0006 hypothetical protein; hypothetical protein complement(26942..27547) Acidovorax ebreus TPSY 7382715 YP_002551514.1 CDS Dtpsy_0025 NC_011992.1 27674 28303 R PFAM: protein of unknown function DUF1520; KEGG: ajs:Ajs_0007 hypothetical protein; protein of unknown function DUF1520 complement(27674..28303) Acidovorax ebreus TPSY 7382716 YP_002551515.1 CDS rdgC NC_011992.1 28616 29593 D Required for efficient pilin antigenic variation; recombination associated protein 28616..29593 Acidovorax ebreus TPSY 7382717 YP_002551516.1 CDS Dtpsy_0027 NC_011992.1 29663 31015 R PFAM: sodium:dicarboxylate symporter; KEGG: ajs:Ajs_0009 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter complement(29663..31015) Acidovorax ebreus TPSY 7382718 YP_002551517.1 CDS Dtpsy_0028 NC_011992.1 31185 33839 D PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ajs:Ajs_0010 multi-sensor hybrid histidine kinase; PAS/PAC sensor hybrid histidine kinase 31185..33839 Acidovorax ebreus TPSY 7382719 YP_002551518.1 CDS Dtpsy_0029 NC_011992.1 33910 34554 R PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; response regulator receiver; KEGG: ajs:Ajs_0011 two component LuxR family transcriptional regulator; two component transcriptional regulator, LuxR family complement(33910..34554) Acidovorax ebreus TPSY 7382720 YP_002551519.1 CDS Dtpsy_0030 NC_011992.1 34609 35862 D PFAM: nucleoside recognition domain protein; KEGG: ajs:Ajs_0012 nucleoside recognition domain-containing protein; nucleoside recognition domain protein 34609..35862 Acidovorax ebreus TPSY 7382721 YP_002551520.1 CDS Dtpsy_0031 NC_011992.1 36339 36641 D KEGG: ajs:Ajs_0013 hypothetical protein; hypothetical protein 36339..36641 Acidovorax ebreus TPSY 7382722 YP_002551521.1 CDS Dtpsy_0032 NC_011992.1 36938 38125 R catalyzes the formation of beta-ketovaleryl-CoA from acetyl-CoA and propionyl-CoA; beta-ketothiolase complement(36938..38125) Acidovorax ebreus TPSY 7382723 YP_002551522.1 CDS Dtpsy_0033 NC_011992.1 38122 38673 R PFAM: protein of unknown function DUF1130; KEGG: ajs:Ajs_0015 hypothetical protein; protein of unknown function DUF1130 complement(38122..38673) Acidovorax ebreus TPSY 7382724 YP_002551523.1 CDS Dtpsy_0034 NC_011992.1 38686 38901 R KEGG: ajs:Ajs_0016 hypothetical protein; hypothetical protein complement(38686..38901) Acidovorax ebreus TPSY 7382725 YP_002551524.1 CDS Dtpsy_0035 NC_011992.1 39013 39516 R KEGG: ajs:Ajs_0017 MerR family transcriptional regulator; TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; SMART: regulatory protein MerR; transcriptional regulator, MerR family complement(39013..39516) Acidovorax ebreus TPSY 7382726 YP_002551525.1 CDS Dtpsy_0036 NC_011992.1 39513 39710 R PFAM: Heavy metal transport/detoxification protein; KEGG: ajs:Ajs_0018 heavy metal transport/detoxification protein; Heavy metal transport/detoxification protein complement(39513..39710) Acidovorax ebreus TPSY 7382727 YP_002551526.1 CDS Dtpsy_0037 NC_011992.1 39889 42237 D TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: ajs:Ajs_0019 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase 39889..42237 Acidovorax ebreus TPSY 7382728 YP_002551527.1 CDS Dtpsy_0038 NC_011992.1 42422 44074 D PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; SMART: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: ajs:Ajs_0020 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 42422..44074 Acidovorax ebreus TPSY 7382729 YP_002551528.1 CDS Dtpsy_0039 NC_011992.1 44261 45010 R PFAM: protein of unknown function DUF81; KEGG: dac:Daci_2500 hypothetical protein; protein of unknown function DUF81 complement(44261..45010) Acidovorax ebreus TPSY 7382730 YP_002551529.1 CDS Dtpsy_0040 NC_011992.1 45165 46289 R PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: ajs:Ajs_0022 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase/NADH oxidase complement(45165..46289) Acidovorax ebreus TPSY 7382731 YP_002551530.1 CDS Dtpsy_0041 NC_011992.1 46360 46545 R hypothetical protein complement(46360..46545) Acidovorax ebreus TPSY 7382732 YP_002551531.1 CDS Dtpsy_0042 NC_011992.1 46553 47161 R PFAM: Glutathione S-transferase domain; KEGG: ajs:Ajs_0023 glutathione S-transferase domain-containing protein; Glutathione S-transferase domain protein complement(46553..47161) Acidovorax ebreus TPSY 7382733 YP_002551532.1 CDS Dtpsy_0043 NC_011992.1 47296 47562 R PFAM: protein of unknown function UPF0153; KEGG: ajs:Ajs_0024 hypothetical protein; protein of unknown function UPF0153 complement(47296..47562) Acidovorax ebreus TPSY 7382734 YP_002551533.1 CDS Dtpsy_0044 NC_011992.1 47628 48212 R PFAM: NADPH-dependent FMN reductase; KEGG: ajs:Ajs_0025 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase complement(47628..48212) Acidovorax ebreus TPSY 7382735 YP_002551534.1 CDS Dtpsy_0045 NC_011992.1 48425 50398 D GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 48425..50398 Acidovorax ebreus TPSY 7382736 YP_002551535.1 CDS gidB NC_011992.1 50395 51075 D glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB 50395..51075 Acidovorax ebreus TPSY 7382737 YP_002551536.1 CDS Dtpsy_0047 NC_011992.1 51110 51724 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: ajs:Ajs_0028 lysine exporter protein LysE/YggA; Lysine exporter protein (LYSE/YGGA) 51110..51724 Acidovorax ebreus TPSY 7382738 YP_002551537.1 CDS Dtpsy_0048 NC_011992.1 51741 52511 D PFAM: Cobyrinic acid ac-diamide synthase; KEGG: ajs:Ajs_0029 chromosome segregation ATPase; Cobyrinic acid ac-diamide synthase 51741..52511 Acidovorax ebreus TPSY 7382739 YP_002551538.1 CDS Dtpsy_0049 NC_011992.1 52598 53140 D PFAM: protein of unknown function DUF1234; KEGG: ajs:Ajs_0030 hypothetical protein; protein of unknown function DUF1234 52598..53140 Acidovorax ebreus TPSY 7382740 YP_002551539.1 CDS Dtpsy_0050 NC_011992.1 53147 54142 D KEGG: ajs:Ajs_0031 chromosome segregation DNA-binding protein; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; parB-like partition protein 53147..54142 Acidovorax ebreus TPSY 7382741 YP_002551540.1 CDS Dtpsy_0051 NC_011992.1 54168 54965 D KEGG: ajs:Ajs_0032 methyltransferase type 12; methyltransferase type 12 54168..54965 Acidovorax ebreus TPSY 7382742 YP_002551541.1 CDS Dtpsy_0052 NC_011992.1 55131 56171 D PFAM: Peptidoglycan-binding domain 1 protein; KEGG: ajs:Ajs_0033 peptidoglycan binding domain-containing protein; Peptidoglycan-binding domain 1 protein 55131..56171 Acidovorax ebreus TPSY 7382743 YP_002551542.1 CDS Dtpsy_0053 NC_011992.1 56416 57132 D KEGG: reh:H16_B2252 hypothetical protein; hypothetical protein 56416..57132 Acidovorax ebreus TPSY 7382744 YP_002551543.1 CDS Dtpsy_0054 NC_011992.1 57198 58118 R PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ajs:Ajs_0038 AraC family transcriptional regulator; transcriptional regulator, AraC family complement(57198..58118) Acidovorax ebreus TPSY 7382745 YP_002551544.1 CDS Dtpsy_0055 NC_011992.1 58178 59425 D PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_0039 major facilitator superfamily transporter; major facilitator superfamily MFS_1 58178..59425 Acidovorax ebreus TPSY 7382746 YP_002551545.1 CDS Dtpsy_0056 NC_011992.1 59741 60484 D PFAM: ChaC family protein; KEGG: rru:Rru_A2776 ChaC-like protein; ChaC family protein 59741..60484 Acidovorax ebreus TPSY 7382747 YP_002551546.1 CDS Dtpsy_0057 NC_011992.1 60623 61225 D TIGRFAM: flavoprotein WrbA; PFAM: NADPH-dependent FMN reductase; flavodoxin/nitric oxide synthase; KEGG: azc:AZC_4089 flavoprotein; flavoprotein WrbA 60623..61225 Acidovorax ebreus TPSY 7382748 YP_002551547.1 CDS Dtpsy_0058 NC_011992.1 62519 62827 R TIGRFAM: CRISPR-associated protein Cas2; PFAM: protein of unknown function DUF196; KEGG: pmu:PM1125 hypothetical protein; CRISPR-associated protein Cas2 complement(62519..62827) Acidovorax ebreus TPSY 7382749 YP_002551548.1 CDS Dtpsy_0059 NC_011992.1 62864 63772 R TIGRFAM: CRISPR-associated protein Cas1; protein of unknown function DUF48; PFAM: protein of unknown function DUF48; KEGG: asu:Asuc_0377 CRISPR-associated Cas1 family protein; protein of unknown function DUF48 complement(62864..63772) Acidovorax ebreus TPSY 7382750 YP_002551549.1 CDS Dtpsy_0060 NC_011992.1 63759 67154 R TIGRFAM: CRISPR-associated protein, Csn1 family; KEGG: pmu:PM1127 hypothetical protein; CRISPR-associated protein, Csn1 family complement(63759..67154) Acidovorax ebreus TPSY 7382751 YP_002551550.1 CDS Dtpsy_0061 NC_011992.1 67350 68774 R PFAM: FAD linked oxidase domain protein; KEGG: ajs:Ajs_0040 fis family transcriptional regulator; FAD linked oxidase domain protein complement(67350..68774) Acidovorax ebreus TPSY 7382752 YP_002551551.1 CDS Dtpsy_0062 NC_011992.1 69026 69406 R KEGG: ajs:Ajs_0042 calcium-binding EF-hand-containing protein; calcium-binding EF-hand-containing protein complement(69026..69406) Acidovorax ebreus TPSY 7382753 YP_002551552.1 CDS Dtpsy_0063 NC_011992.1 69562 70134 D TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: ajs:Ajs_0043 ATP:cob(I)alamin adenosyltransferase; ATP/cobalamin adenosyltransferase 69562..70134 Acidovorax ebreus TPSY 7382754 YP_002551553.1 CDS Dtpsy_0064 NC_011992.1 70493 70915 R PFAM: thioesterase superfamily protein; KEGG: ajs:Ajs_0044 hypothetical protein; thioesterase superfamily protein complement(70493..70915) Acidovorax ebreus TPSY 7382755 YP_002551554.1 CDS Dtpsy_0065 NC_011992.1 71139 72296 D PFAM: Extracellular ligand-binding receptor; KEGG: ajs:Ajs_0045 extracellular ligand-binding receptor; Extracellular ligand-binding receptor 71139..72296 Acidovorax ebreus TPSY 7382756 YP_002551555.1 CDS Dtpsy_0066 NC_011992.1 72543 74063 R KEGG: ajs:Ajs_0046 acetyl-CoA hydrolase; TIGRFAM: succinate CoA transferase; PFAM: acetyl-CoA hydrolase/transferase; succinate CoA transferase complement(72543..74063) Acidovorax ebreus TPSY 7382757 YP_002551556.1 CDS Dtpsy_0067 NC_011992.1 74263 74994 D KEGG: ajs:Ajs_0047 hypothetical protein; hypothetical protein 74263..74994 Acidovorax ebreus TPSY 7382758 YP_002551557.1 CDS Dtpsy_0068 NC_011992.1 75130 76416 R TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: ajs:Ajs_0048 uracil-xanthine permease; uracil-xanthine permease complement(75130..76416) Acidovorax ebreus TPSY 7382759 YP_002551558.1 CDS Dtpsy_0069 NC_011992.1 76619 77917 R KEGG: ajs:Ajs_0049 methyl-accepting chemotaxis sensory transducer; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor complement(76619..77917) Acidovorax ebreus TPSY 7382760 YP_002551559.1 CDS Dtpsy_0070 NC_011992.1 78014 79921 R PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: ajs:Ajs_0050 radical SAM domain-containing protein; Radical SAM domain protein complement(78014..79921) Acidovorax ebreus TPSY 7382761 YP_002551560.1 CDS Dtpsy_0071 NC_011992.1 80000 81010 R KEGG: dac:Daci_1599 diguanylate cyclase with GAF sensor; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; SMART: GGDEF domain containing protein; GAF domain protein; diguanylate cyclase with GAF sensor complement(80000..81010) Acidovorax ebreus TPSY 7382762 YP_002551561.1 CDS Dtpsy_0072 NC_011992.1 81098 82363 R TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: ajs:Ajs_0052 hypothetical protein; hypothetical protein complement(81098..82363) Acidovorax ebreus TPSY 7382763 YP_002551562.1 CDS Dtpsy_0073 NC_011992.1 82536 82775 D KEGG: ajs:Ajs_0053 hypothetical protein; hypothetical protein 82536..82775 Acidovorax ebreus TPSY 7382764 YP_002551563.1 CDS Dtpsy_0074 NC_011992.1 82917 85004 D AcsA; in Sinorhizobium meliloti this enzyme is required for acetoacetate activation; similar to acetyl-CoA synthase; acetoacetyl-CoA synthetase 82917..85004 Acidovorax ebreus TPSY 7382765 YP_002551564.1 CDS Dtpsy_0076 NC_011992.1 85523 86431 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bav:BAV1031 LysR-family transcriptional regulator; transcriptional regulator, LysR family complement(85523..86431) Acidovorax ebreus TPSY 7382767 YP_002551565.1 CDS Dtpsy_0077 NC_011992.1 86480 87709 R PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mrd:Mrad2831_3262 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F complement(86480..87709) Acidovorax ebreus TPSY 7382768 YP_002551566.1 CDS Dtpsy_0078 NC_011992.1 87722 88813 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: mrd:Mrad2831_3261 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase domain protein complement(87722..88813) Acidovorax ebreus TPSY 7382769 YP_002551567.1 CDS Dtpsy_0079 NC_011992.1 88810 89952 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mrd:Mrad2831_3260 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase domain protein complement(88810..89952) Acidovorax ebreus TPSY 7382770 YP_002551568.1 CDS Dtpsy_0080 NC_011992.1 89962 90762 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: swi:Swit_3272 enoyl-CoA hydratase; Enoyl-CoA hydratase/isomerase complement(89962..90762) Acidovorax ebreus TPSY 7382771 YP_002551569.1 CDS Dtpsy_0081 NC_011992.1 90968 91948 D PFAM: conserved hypothetical protein; KEGG: atc:AGR_pAT_473 hypothetical protein; hypothetical protein 90968..91948 Acidovorax ebreus TPSY 7382772 YP_002551570.1 CDS Dtpsy_0083 NC_011992.1 92416 93039 D TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: ajs:Ajs_0064 CDP-diacylglycerol--serine O-phosphatidyltransferase; CDP-diacylglycerol/serine O-phosphatidyltransferase 92416..93039 Acidovorax ebreus TPSY 7384315 YP_002551571.1 CDS Dtpsy_0084 NC_011992.1 93269 94036 D TIGRFAM: septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC; KEGG: ajs:Ajs_0065 septum site-determining protein MinC; septum site-determining protein MinC 93269..94036 Acidovorax ebreus TPSY 7384316 YP_002551572.1 CDS Dtpsy_0085 NC_011992.1 94090 94905 D TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: ajs:Ajs_0066 septum site-determining protein MinD; septum site-determining protein MinD 94090..94905 Acidovorax ebreus TPSY 7384317 YP_002551573.1 CDS Dtpsy_0086 NC_011992.1 94911 95177 D TIGRFAM: cell division topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE; KEGG: ajs:Ajs_0067 cell division topological specificity factor MinE; cell division topological specificity factor MinE 94911..95177 Acidovorax ebreus TPSY 7384318 YP_002551574.1 CDS Dtpsy_0087 NC_011992.1 95254 95814 R PFAM: flavin reductase domain protein FMN-binding; KEGG: ajs:Ajs_0068 flavin reductase domain-containing protein; flavin reductase domain protein FMN-binding complement(95254..95814) Acidovorax ebreus TPSY 7384319 YP_002551575.1 CDS Dtpsy_0088 NC_011992.1 95923 96705 D PFAM: alpha/beta hydrolase fold; KEGG: ajs:Ajs_0069 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 95923..96705 Acidovorax ebreus TPSY 7384320 YP_002551576.1 CDS Dtpsy_0089 NC_011992.1 96844 98034 D PFAM: Extracellular ligand-binding receptor; KEGG: ajs:Ajs_0070 extracellular ligand-binding receptor; Extracellular ligand-binding receptor 96844..98034 Acidovorax ebreus TPSY 7384321 YP_002551577.1 CDS Dtpsy_0090 NC_011992.1 98047 99387 R PFAM: FAD dependent oxidoreductase; KEGG: ajs:Ajs_0071 D-amino-acid dehydrogenase; D-amino-acid dehydrogenase complement(98047..99387) Acidovorax ebreus TPSY 7384322 YP_002551578.1 CDS Dtpsy_0091 NC_011992.1 99475 100386 D specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; chromosome replication initiation inhibitor protein 99475..100386 Acidovorax ebreus TPSY 7384323 YP_002551579.1 CDS Dtpsy_0092 NC_011992.1 100457 101089 D PFAM: regulatory protein TetR; KEGG: ajs:Ajs_0073 TetR family transcriptional regulator; transcriptional regulator, TetR family 100457..101089 Acidovorax ebreus TPSY 7384324 YP_002551580.1 CDS Dtpsy_0093 NC_011992.1 101090 101512 R PFAM: UspA domain protein; KEGG: ajs:Ajs_0074 UspA domain-containing protein; UspA domain protein complement(101090..101512) Acidovorax ebreus TPSY 7384325 YP_002551581.1 CDS Dtpsy_0094 NC_011992.1 101625 102470 R PFAM: metallophosphoesterase; KEGG: ajs:Ajs_0075 metallophosphoesterase; metallophosphoesterase complement(101625..102470) Acidovorax ebreus TPSY 7384326 YP_002551582.1 CDS Dtpsy_0095 NC_011992.1 102487 103458 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_0076 LysR family transcriptional regulator; transcriptional regulator, LysR family complement(102487..103458) Acidovorax ebreus TPSY 7384327 YP_002551583.1 CDS Dtpsy_0096 NC_011992.1 103582 104022 D KEGG: ajs:Ajs_0077 hypothetical protein; hypothetical protein 103582..104022 Acidovorax ebreus TPSY 7384328 YP_002551584.1 CDS Dtpsy_0097 NC_011992.1 104202 106073 R catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP; phosphoenolpyruvate carboxykinase complement(104202..106073) Acidovorax ebreus TPSY 7384329 YP_002551585.1 CDS Dtpsy_0098 NC_011992.1 106408 106569 R KEGG: ajs:Ajs_0079 hypothetical protein; hypothetical protein complement(106408..106569) Acidovorax ebreus TPSY 7384330 YP_002551586.1 CDS Dtpsy_0099 NC_011992.1 106677 107876 R catalyzes the formation of 2-oxobutanoate from L-threonine; threonine dehydratase complement(106677..107876) Acidovorax ebreus TPSY 7384331 YP_002551587.1 CDS Dtpsy_0100 NC_011992.1 107988 109643 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_0081 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase domain protein complement(107988..109643) Acidovorax ebreus TPSY 7384332 YP_002551588.1 CDS Dtpsy_0101 NC_011992.1 109796 110458 R KEGG: ajs:Ajs_0082 hypothetical protein; hypothetical protein complement(109796..110458) Acidovorax ebreus TPSY 7384333 YP_002551589.1 CDS Dtpsy_0102 NC_011992.1 110506 111540 R PFAM: homocysteine S-methyltransferase; KEGG: ajs:Ajs_0083 methionine synthase (B12-dependent); homocysteine S-methyltransferase complement(110506..111540) Acidovorax ebreus TPSY 7384334 YP_002551590.1 CDS Dtpsy_0103 NC_011992.1 111704 113575 D KEGG: ajs:Ajs_0084 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: helicase domain protein; HRDC domain protein; DEAD-like helicases; ATP-dependent DNA helicase RecQ 111704..113575 Acidovorax ebreus TPSY 7384335 YP_002551591.1 CDS Dtpsy_0104 NC_011992.1 113493 114263 R TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: Radical SAM domain protein; KEGG: ajs:Ajs_0085 anaerobic ribonucleoside-triphosphate reductase activating protein; anaerobic ribonucleoside-triphosphate reductase activating protein complement(113493..114263) Acidovorax ebreus TPSY 7384336 YP_002551592.1 CDS Dtpsy_0105 NC_011992.1 114253 114444 R KEGG: ajs:Ajs_0086 hypothetical protein; hypothetical protein complement(114253..114444) Acidovorax ebreus TPSY 7384337 YP_002551593.1 CDS Dtpsy_0106 NC_011992.1 114535 116562 R Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase complement(114535..116562) Acidovorax ebreus TPSY 7384338 YP_002551594.1 CDS Dtpsy_0108 NC_011992.1 120465 120890 R KEGG: ajs:Ajs_0091 hemerythrin HHE cation binding domain-containing protein; hemerythrin HHE cation binding domain-containing protein complement(120465..120890) Acidovorax ebreus TPSY 7384340 YP_002551595.1 CDS Dtpsy_0109 NC_011992.1 120965 123271 R KEGG: ajs:Ajs_0092 nitric oxide reductase large subunit; nitric oxide reductase large subunit complement(120965..123271) Acidovorax ebreus TPSY 7384341 YP_002551596.1 CDS Dtpsy_0110 NC_011992.1 123545 125155 D Required for the expression of anaerobic nitric oxide (NO) reductase; acts as a transcriptional activator for the norVW operon; anaerobic nitric oxide reductase transcription regulator 123545..125155 Acidovorax ebreus TPSY 7384342 YP_002551597.1 CDS Dtpsy_0111 NC_011992.1 125300 126349 D KEGG: ajs:Ajs_0094 hypothetical protein; hypothetical protein 125300..126349 Acidovorax ebreus TPSY 7384343 YP_002551598.1 CDS Dtpsy_0112 NC_011992.1 126432 127820 D KEGG: ajs:Ajs_0095 L-serine ammonia-lyase; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; L-serine dehydratase 1 126432..127820 Acidovorax ebreus TPSY 7384344 YP_002551599.1 CDS Dtpsy_0113 NC_011992.1 127879 129087 D catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 127879..129087 Acidovorax ebreus TPSY 7384345 YP_002551600.1 CDS Dtpsy_0114 NC_011992.1 129266 130216 D PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0097 hypothetical protein; hypothetical protein 129266..130216 Acidovorax ebreus TPSY 7384346 YP_002551601.1 CDS Dtpsy_0115 NC_011992.1 130262 131842 D PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_0098 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 130262..131842 Acidovorax ebreus TPSY 7384347 YP_002551602.1 CDS Dtpsy_0116 NC_011992.1 131870 132865 D PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0099 hypothetical protein; hypothetical protein 131870..132865 Acidovorax ebreus TPSY 7384348 YP_002551603.1 CDS Dtpsy_0117 NC_011992.1 133029 133496 D PFAM: thioesterase superfamily protein; KEGG: ajs:Ajs_0100 hypothetical protein; thioesterase superfamily protein 133029..133496 Acidovorax ebreus TPSY 7384349 YP_002551604.1 CDS Dtpsy_0118 NC_011992.1 133513 134532 R PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0101 hypothetical protein; hypothetical protein complement(133513..134532) Acidovorax ebreus TPSY 7384350 YP_002551605.1 CDS Dtpsy_0119 NC_011992.1 134761 135747 R PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0102 hypothetical protein; hypothetical protein complement(134761..135747) Acidovorax ebreus TPSY 7384351 YP_002551606.1 CDS Dtpsy_0120 NC_011992.1 135792 136946 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_0103 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase domain protein complement(135792..136946) Acidovorax ebreus TPSY 7384352 YP_002551607.1 CDS Dtpsy_0121 NC_011992.1 137019 138587 R PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_0104 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(137019..138587) Acidovorax ebreus TPSY 7384353 YP_002551608.1 CDS Dtpsy_0122 NC_011992.1 138787 139965 D KEGG: ajs:Ajs_0105 acetyl-CoA acetyltransferases; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase 138787..139965 Acidovorax ebreus TPSY 7384354 YP_002551609.1 CDS Dtpsy_0123 NC_011992.1 140029 140796 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ajs:Ajs_0106 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 140029..140796 Acidovorax ebreus TPSY 7384355 YP_002551610.1 CDS Dtpsy_0124 NC_011992.1 140970 141734 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 140970..141734 Acidovorax ebreus TPSY 7384356 YP_002551611.1 CDS Dtpsy_0125 NC_011992.1 141835 142833 D PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0108 hypothetical protein; hypothetical protein 141835..142833 Acidovorax ebreus TPSY 7384357 YP_002551612.1 CDS Dtpsy_0126 NC_011992.1 142846 143652 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ajs:Ajs_0109 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 142846..143652 Acidovorax ebreus TPSY 7384358 YP_002551613.1 CDS Dtpsy_0128 NC_011992.1 144482 145270 D PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: ajs:Ajs_0111 regulatory proteins, IclR; transcriptional regulator, IclR family 144482..145270 Acidovorax ebreus TPSY 7384360 YP_002551614.1 CDS Dtpsy_0129 NC_011992.1 145314 146426 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: ajs:Ajs_0112 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 145314..146426 Acidovorax ebreus TPSY 7384361 YP_002551615.1 CDS Dtpsy_0130 NC_011992.1 146463 147686 R PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_0113 major facilitator superfamily transporter; major facilitator superfamily MFS_1 complement(146463..147686) Acidovorax ebreus TPSY 7384362 YP_002551616.1 CDS Dtpsy_0131 NC_011992.1 147769 148638 R PFAM: HpcH/HpaI aldolase; KEGG: ajs:Ajs_0114 HpcH/HpaI aldolase; HpcH/HpaI aldolase complement(147769..148638) Acidovorax ebreus TPSY 7384363 YP_002551617.1 CDS Dtpsy_0132 NC_011992.1 148668 149045 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cti:RALTA_B2224 putative metallothiol transferase; Glyoxalase/bleomycin resistance protein/dioxygenase complement(148668..149045) Acidovorax ebreus TPSY 7384364 YP_002551618.1 CDS Dtpsy_0133 NC_011992.1 149109 150116 R PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0115 hypothetical protein; hypothetical protein complement(149109..150116) Acidovorax ebreus TPSY 7384365 YP_002551619.1 CDS Dtpsy_0134 NC_011992.1 150205 151569 R PFAM: MmgE/PrpD family protein; KEGG: ajs:Ajs_0116 MmgE/PrpD family protein; MmgE/PrpD family protein complement(150205..151569) Acidovorax ebreus TPSY 7384366 YP_002551620.1 CDS Dtpsy_0135 NC_011992.1 151620 152810 R PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: ajs:Ajs_0117 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F complement(151620..152810) Acidovorax ebreus TPSY 7384367 YP_002551621.1 CDS Dtpsy_0136 NC_011992.1 152979 154139 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_0118 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase domain protein complement(152979..154139) Acidovorax ebreus TPSY 7384368 YP_002551622.1 CDS Dtpsy_0137 NC_011992.1 154211 155116 R KEGG: ajs:Ajs_0119 hypothetical protein; hypothetical protein complement(154211..155116) Acidovorax ebreus TPSY 7384369 YP_002551623.1 CDS Dtpsy_0138 NC_011992.1 155310 156227 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ajs:Ajs_0120 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 155310..156227 Acidovorax ebreus TPSY 7384370 YP_002551624.1 CDS Dtpsy_0139 NC_011992.1 156417 157310 D PFAM: MaoC domain protein dehydratase; KEGG: ajs:Ajs_0121 dehydratase; 3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoAhydratase 156417..157310 Acidovorax ebreus TPSY 7384371 YP_002551625.1 CDS Dtpsy_0140 NC_011992.1 157389 158183 D PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ajs:Ajs_0122 enoyl-CoA hydratase; Enoyl-CoA hydratase/isomerase 157389..158183 Acidovorax ebreus TPSY 7384372 YP_002551626.1 CDS Dtpsy_0141 NC_011992.1 158355 159635 D PFAM: acetyl-CoA hydrolase/transferase; KEGG: ajs:Ajs_0123 acetyl-CoA hydrolase/transferase; acetyl-CoA hydrolase/transferase 158355..159635 Acidovorax ebreus TPSY 7384373 YP_002551627.1 CDS Dtpsy_0142 NC_011992.1 159702 160910 D Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 159702..160910 Acidovorax ebreus TPSY 7384374 YP_002551628.1 CDS Dtpsy_0143 NC_011992.1 161170 162144 D PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0125 hypothetical protein; hypothetical protein 161170..162144 Acidovorax ebreus TPSY 7384375 YP_002551629.1 CDS Dtpsy_0144 NC_011992.1 162146 163660 D PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_0126 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 162146..163660 Acidovorax ebreus TPSY 7384376 YP_002551630.1 CDS Dtpsy_0145 NC_011992.1 163679 164656 D PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0127 hypothetical protein; hypothetical protein 163679..164656 Acidovorax ebreus TPSY 7384377 YP_002551631.1 CDS Dtpsy_0146 NC_011992.1 164752 165135 D PFAM: protein of unknown function DUF35; KEGG: ajs:Ajs_0128 hypothetical protein; protein of unknown function DUF35 164752..165135 Acidovorax ebreus TPSY 7384378 YP_002551632.1 CDS Dtpsy_0147 NC_011992.1 165132 166340 D KEGG: ajs:Ajs_0129 thiolase; thiolase 165132..166340 Acidovorax ebreus TPSY 7384379 YP_002551633.1 CDS Dtpsy_0148 NC_011992.1 166367 167524 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_0130 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase domain protein 166367..167524 Acidovorax ebreus TPSY 7384380 YP_002551634.1 CDS Dtpsy_0149 NC_011992.1 167521 167943 D PFAM: thioesterase superfamily protein; KEGG: ajs:Ajs_0131 hypothetical protein; thioesterase superfamily protein 167521..167943 Acidovorax ebreus TPSY 7384381 YP_002551635.1 CDS Dtpsy_0150 NC_011992.1 168020 168943 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_0132 LysR family transcriptional regulator; transcriptional regulator, LysR family complement(168020..168943) Acidovorax ebreus TPSY 7384382 YP_002551636.1 CDS Dtpsy_0151 NC_011992.1 168997 170349 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: ajs:Ajs_0133 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 168997..170349 Acidovorax ebreus TPSY 7384383 YP_002551637.1 CDS Dtpsy_0152 NC_011992.1 170357 171337 R PFAM: porin Gram-negative type; KEGG: ajs:Ajs_0134 porin; porin Gram-negative type complement(170357..171337) Acidovorax ebreus TPSY 7384384 YP_002551638.1 CDS Dtpsy_0153 NC_011992.1 171687 172991 R PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: ajs:Ajs_0135 Glu/Leu/Phe/Val dehydrogenase, C terminal; Glu/Leu/Phe/Val dehydrogenase complement(171687..172991) Acidovorax ebreus TPSY 7384385 YP_002551639.1 CDS Dtpsy_0154 NC_011992.1 173172 174089 R PFAM: protein of unknown function DUF344; KEGG: ajs:Ajs_0136 hypothetical protein; protein of unknown function DUF344 complement(173172..174089) Acidovorax ebreus TPSY 7384386 YP_002551640.1 CDS Dtpsy_0155 NC_011992.1 174119 175042 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_0137 LysR family transcriptional regulator; transcriptional regulator, LysR family complement(174119..175042) Acidovorax ebreus TPSY 7384387 YP_002551641.1 CDS Dtpsy_0156 NC_011992.1 175114 175602 D PFAM: transmembrane pair domain protein; KEGG: ajs:Ajs_0138 transmembrane pair domain-containing protein; transmembrane pair domain protein 175114..175602 Acidovorax ebreus TPSY 7384388 YP_002551642.1 CDS Dtpsy_0157 NC_011992.1 175647 176573 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_0139 LysR family transcriptional regulator; transcriptional regulator, LysR family complement(175647..176573) Acidovorax ebreus TPSY 7385327 YP_002551643.1 CDS Dtpsy_0158 NC_011992.1 176722 177924 D TIGRFAM: muconate and chloromuconate cycloisomerase; PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: ajs:Ajs_0140 muconate and chloromuconate cycloisomerases; muconate and chloromuconate cycloisomerase 176722..177924 Acidovorax ebreus TPSY 7383422 YP_002551644.1 CDS Dtpsy_0159 NC_011992.1 177953 178249 D KEGG: ajs:Ajs_0141 muconolactone delta-isomerase; TIGRFAM: muconolactone delta-isomerase; PFAM: Muconolactone delta-isomerase; muconolactone delta-isomerase 177953..178249 Acidovorax ebreus TPSY 7383423 YP_002551645.1 CDS Dtpsy_0160 NC_011992.1 178296 179219 D PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase domain protein; KEGG: ajs:Ajs_0142 intradiol ring-cleavage dioxygenase; intradiol ring-cleavage dioxygenase 178296..179219 Acidovorax ebreus TPSY 7383424 YP_002551646.1 CDS Dtpsy_0161 NC_011992.1 179246 180238 D PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0143 hypothetical protein; hypothetical protein 179246..180238 Acidovorax ebreus TPSY 7383425 YP_002551647.1 CDS Dtpsy_0162 NC_011992.1 180324 181736 R TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: ajs:Ajs_0144 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; cytochrome c oxidase accessory protein CcoG complement(180324..181736) Acidovorax ebreus TPSY 7383426 YP_002551648.1 CDS Dtpsy_0163 NC_011992.1 181781 182395 R KEGG: ajs:Ajs_0145 ubiquinol-cytochrome c reductase, iron-sulfur subunit; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein; ubiquinol-cytochrome c reductase, iron-sulfur subunit complement(181781..182395) Acidovorax ebreus TPSY 7383427 YP_002551649.1 CDS Dtpsy_0164 NC_011992.1 182599 183951 D PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; PAS fold-4 domain protein; SMART: AAA ATPase; KEGG: ajs:Ajs_0146 sigma-54 dependent trancsriptional regulator; sigma54 specific transcriptional regulator, Fis family 182599..183951 Acidovorax ebreus TPSY 7383428 YP_002551650.1 CDS Dtpsy_0165 NC_011992.1 184270 187059 D KEGG: ajs:Ajs_0147 methionine synthase (B12-dependent); TIGRFAM: methionine synthase; PFAM: dihydropteroate synthase DHPS; Methionine synthase B12-binding module cap domain protein; Vitamin B12 dependent methionine synthase activation region; cobalamin B12-binding domain protein; methionine synthase 184270..187059 Acidovorax ebreus TPSY 7383429 YP_002551651.1 CDS Dtpsy_0166 NC_011992.1 187095 188696 D PFAM: Peptidoglycan-binding domain 1 protein; ErfK/YbiS/YcfS/YnhG family protein; KEGG: ajs:Ajs_0148 peptidoglycan binding domain-containing protein; ErfK/YbiS/YcfS/YnhG family protein 187095..188696 Acidovorax ebreus TPSY 7383430 YP_002551652.1 CDS Dtpsy_0167 NC_011992.1 188730 189302 D PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: ajs:Ajs_0149 hypothetical protein; protein of unknown function DUF882 188730..189302 Acidovorax ebreus TPSY 7383431 YP_002551653.1 CDS aroK NC_011992.1 189371 189907 R catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase complement(189371..189907) Acidovorax ebreus TPSY 7383432 YP_002551654.1 CDS Dtpsy_0169 NC_011992.1 190039 190956 D PFAM: ribonuclease BN; KEGG: ajs:Ajs_0151 ribonuclease BN; ribonuclease BN 190039..190956 Acidovorax ebreus TPSY 7383433 YP_002551655.1 CDS Dtpsy_0170 NC_011992.1 191082 191924 D PFAM: 17 kDa surface antigen; KEGG: ajs:Ajs_0152 17 kDa surface antigen; 17 kDa surface antigen 191082..191924 Acidovorax ebreus TPSY 7383434 YP_002551656.1 CDS Dtpsy_0171 NC_011992.1 192095 192868 R PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: ajs:Ajs_0153 ferredoxin--NADP(+) reductase; oxidoreductase FAD/NAD(P)-binding domain protein complement(192095..192868) Acidovorax ebreus TPSY 7383435 YP_002551657.1 CDS Dtpsy_0172 NC_011992.1 193128 194315 D PFAM: Extracellular ligand-binding receptor; KEGG: ajs:Ajs_0154 extracellular ligand-binding receptor; Extracellular ligand-binding receptor 193128..194315 Acidovorax ebreus TPSY 7383436 YP_002551658.1 CDS Dtpsy_0173 NC_011992.1 194448 196355 D PFAM: inner-membrane translocator; KEGG: ajs:Ajs_0155 inner-membrane translocator; inner-membrane translocator 194448..196355 Acidovorax ebreus TPSY 7383437 YP_002551659.1 CDS Dtpsy_0174 NC_011992.1 196352 197104 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_0156 ABC transporter related; ABC transporter related 196352..197104 Acidovorax ebreus TPSY 7383438 YP_002551660.1 CDS Dtpsy_0175 NC_011992.1 197101 197880 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_0157 ABC transporter related; ABC transporter related 197101..197880 Acidovorax ebreus TPSY 7383439 YP_002551661.1 CDS Dtpsy_0176 NC_011992.1 197911 198828 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_0158 LysR family transcriptional regulator; transcriptional regulator, LysR family complement(197911..198828) Acidovorax ebreus TPSY 7383440 YP_002551662.1 CDS Dtpsy_0177 NC_011992.1 198938 199747 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ajs:Ajs_0159 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 198938..199747 Acidovorax ebreus TPSY 7383441 YP_002551663.1 CDS Dtpsy_0178 NC_011992.1 199876 201621 R PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; SMART: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: ajs:Ajs_0160 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(199876..201621) Acidovorax ebreus TPSY 7383442 YP_002551664.1 CDS Dtpsy_0179 NC_011992.1 201667 203205 R KEGG: ajs:Ajs_0161 Mg chelatase, subunit ChlI; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; Mg chelatase, subunit ChlI complement(201667..203205) Acidovorax ebreus TPSY 7383443 YP_002551665.1 CDS Dtpsy_0180 NC_011992.1 203424 204155 D PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0162 hypothetical protein; hypothetical protein 203424..204155 Acidovorax ebreus TPSY 7383444 YP_002551666.1 CDS Dtpsy_0181 NC_011992.1 204176 204514 D PFAM: nitrogen regulatory protein P-II; KEGG: ajs:Ajs_0163 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 204176..204514 Acidovorax ebreus TPSY 7383445 YP_002551667.1 CDS Dtpsy_0182 NC_011992.1 204561 205982 D TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: ajs:Ajs_0164 ammonium transporter; ammonium transporter 204561..205982 Acidovorax ebreus TPSY 7383446 YP_002551668.1 CDS Dtpsy_0183 NC_011992.1 206122 207072 D PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: ajs:Ajs_0165 gluconolactonase; SMP-30/Gluconolaconase/LRE domain protein 206122..207072 Acidovorax ebreus TPSY 7383447 YP_002551669.1 CDS Dtpsy_0184 NC_011992.1 207176 208285 D PFAM: FAD linked oxidase domain protein; KEGG: ajs:Ajs_0166 FAD linked oxidase domain-containing protein; FAD linked oxidase domain protein 207176..208285 Acidovorax ebreus TPSY 7383448 YP_002551670.1 CDS Dtpsy_0185 NC_011992.1 208288 209085 D PFAM: protein of unknown function DUF1275; KEGG: ajs:Ajs_0167 hypothetical protein; protein of unknown function DUF1275 208288..209085 Acidovorax ebreus TPSY 7383449 YP_002551671.1 CDS glcF NC_011992.1 209111 210349 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: ajs:Ajs_0168 glycolate oxidase iron-sulfur subunit; glycolate oxidase iron-sulfur subunit 209111..210349 Acidovorax ebreus TPSY 7383450 YP_002551672.1 CDS Dtpsy_0187 NC_011992.1 210411 211280 D PFAM: ProQ activator of osmoprotectant transporter ProP; KEGG: ajs:Ajs_0169 ProQ activator of osmoprotectant transporter ProP; ProQ activator of osmoprotectant transporter ProP 210411..211280 Acidovorax ebreus TPSY 7383451 YP_002551673.1 CDS Dtpsy_0188 NC_011992.1 211380 211769 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ajs:Ajs_0170 glyoxalase/bleomycin resistance protein/dioxygenase; Glyoxalase/bleomycin resistance protein/dioxygenase 211380..211769 Acidovorax ebreus TPSY 7383452 YP_002551674.1 CDS Dtpsy_0189 NC_011992.1 211862 212332 D PFAM: transcription activator effector binding; KEGG: ajs:Ajs_0171 transcription activator, effector binding; transcription activator effector binding 211862..212332 Acidovorax ebreus TPSY 7383453 YP_002551675.1 CDS Dtpsy_0190 NC_011992.1 212410 213138 D PFAM: Helix-turn-helix type 11 domain protein; KEGG: ajs:Ajs_0172 helix-turn-helix, type 11 domain-containing protein; Helix-turn-helix type 11 domain protein 212410..213138 Acidovorax ebreus TPSY 7383454 YP_002551676.1 CDS Dtpsy_0191 NC_011992.1 213405 213890 R PFAM: glutathione peroxidase; KEGG: ajs:Ajs_0173 glutathione peroxidase; Glutathione peroxidase complement(213405..213890) Acidovorax ebreus TPSY 7383455 YP_002551677.1 CDS Dtpsy_0192 NC_011992.1 213887 214828 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: ajs:Ajs_0174 hypothetical protein; protein of unknown function DUF6 transmembrane complement(213887..214828) Acidovorax ebreus TPSY 7383456 YP_002551678.1 CDS Dtpsy_0193 NC_011992.1 214980 216257 R PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_0175 hypothetical protein; lysophospholipid transporter LplT complement(214980..216257) Acidovorax ebreus TPSY 7383457 YP_002551679.1 CDS Dtpsy_0194 NC_011992.1 216398 217495 D KEGG: ajs:Ajs_0176 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein; alanine racemase 216398..217495 Acidovorax ebreus TPSY 7383458 YP_002551680.1 CDS Dtpsy_0195 NC_011992.1 217504 218337 D KEGG: ajs:Ajs_0177 hypothetical protein; hypothetical protein 217504..218337 Acidovorax ebreus TPSY 7383459 YP_002551681.1 CDS Dtpsy_0196 NC_011992.1 218574 219593 D PFAM: Di-haem cytochrome c peroxidase; KEGG: rme:Rmet_4968 di-haem cytochrome c peroxidase; Cytochrome-c peroxidase 218574..219593 Acidovorax ebreus TPSY 7383460 YP_002551682.1 CDS Dtpsy_0197 NC_011992.1 219687 220301 R PFAM: Glutathione S-transferase domain; KEGG: ajs:Ajs_0178 glutathione S-transferase domain-containing protein; Glutathione S-transferase domain protein complement(219687..220301) Acidovorax ebreus TPSY 7383461 YP_002551683.1 CDS Dtpsy_0198 NC_011992.1 220450 220632 R KEGG: ajs:Ajs_0179 hypothetical protein; hypothetical protein complement(220450..220632) Acidovorax ebreus TPSY 7383462 YP_002551684.1 CDS Dtpsy_0199 NC_011992.1 220742 222124 D Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 220742..222124 Acidovorax ebreus TPSY 7383463 YP_002551685.1 CDS Dtpsy_0200 NC_011992.1 222194 222634 D KEGG: ajs:Ajs_0181 hypothetical protein; hypothetical protein 222194..222634 Acidovorax ebreus TPSY 7383464 YP_002551686.1 CDS Dtpsy_0201 NC_011992.1 222681 223619 D catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 222681..223619 Acidovorax ebreus TPSY 7383465 YP_002551687.1 CDS Dtpsy_0202 NC_011992.1 223626 223832 D KEGG: aav:Aave_0265 hypothetical protein; hypothetical protein 223626..223832 Acidovorax ebreus TPSY 7383466 YP_002551688.1 CDS Dtpsy_0203 NC_011992.1 223878 224813 R KEGG: dac:Daci_0318 hypothetical protein; hypothetical protein complement(223878..224813) Acidovorax ebreus TPSY 7383467 YP_002551689.1 CDS Dtpsy_0204 NC_011992.1 224883 226016 D PFAM: glycosyl transferase group 1; KEGG: ajs:Ajs_0185 glycosyl transferase, group 1; glycosyl transferase group 1 224883..226016 Acidovorax ebreus TPSY 7383468 YP_002551690.1 CDS Dtpsy_0205 NC_011992.1 226035 226793 R PFAM: glycosyl transferase family 25; KEGG: sdn:Sden_0207 glycosyl transferase family protein; glycosyl transferase family 25 complement(226035..226793) Acidovorax ebreus TPSY 7383469 YP_002551691.1 CDS Dtpsy_0206 NC_011992.1 226830 228164 D PFAM: O-antigen polymerase; KEGG: ajs:Ajs_0184 O-antigen polymerase; O-antigen polymerase 226830..228164 Acidovorax ebreus TPSY 7383470 YP_002551692.1 CDS Dtpsy_0207 NC_011992.1 228554 229624 R PFAM: 2-nitropropane dioxygenase NPD; KEGG: ajs:Ajs_0188 2-nitropropane dioxygenase, NPD; 2-nitropropane dioxygenase NPD complement(228554..229624) Acidovorax ebreus TPSY 7383471 YP_002551693.1 CDS Dtpsy_0208 NC_011992.1 229621 230517 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_0189 LysR family transcriptional regulator; transcriptional regulator, LysR family complement(229621..230517) Acidovorax ebreus TPSY 7383472 YP_002551694.1 CDS Dtpsy_0209 NC_011992.1 230597 231865 D PFAM: protein of unknown function DUF1228; KEGG: ajs:Ajs_0190 hypothetical protein; protein of unknown function DUF1228 230597..231865 Acidovorax ebreus TPSY 7383473 YP_002551695.1 CDS Dtpsy_0210 NC_011992.1 231873 232601 R PFAM: MOSC domain containing protein; KEGG: ajs:Ajs_0191 MOSC domain-containing protein; MOSC domain containing protein complement(231873..232601) Acidovorax ebreus TPSY 7383474 YP_002551696.1 CDS Dtpsy_0211 NC_011992.1 232598 233161 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: ajs:Ajs_0192 hypothetical protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen complement(232598..233161) Acidovorax ebreus TPSY 7383475 YP_002551697.1 CDS Dtpsy_0212 NC_011992.1 233246 234472 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ajs:Ajs_0193 integral membrane sensor signal transduction histidine kinase; histidine kinase complement(233246..234472) Acidovorax ebreus TPSY 7383476 YP_002551698.1 CDS Dtpsy_0213 NC_011992.1 234500 235216 R PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: ajs:Ajs_0194 two component transcriptional regulator; two component transcriptional regulator, winged helix family complement(234500..235216) Acidovorax ebreus TPSY 7383477 YP_002551699.1 CDS Dtpsy_0214 NC_011992.1 235337 236671 R PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_0199 major facilitator superfamily transporter; major facilitator superfamily MFS_1 complement(235337..236671) Acidovorax ebreus TPSY 7383478 YP_002551700.1 CDS Dtpsy_0215 NC_011992.1 236733 237434 D PFAM: Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ajs:Ajs_0200 AraC family transcriptional regulator; transcriptional regulator, AraC family 236733..237434 Acidovorax ebreus TPSY 7383479 YP_002551701.1 CDS Dtpsy_0216 NC_011992.1 237533 238438 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: ajs:Ajs_0201 hypothetical protein; protein of unknown function DUF6 transmembrane 237533..238438 Acidovorax ebreus TPSY 7383480 YP_002551702.1 CDS Dtpsy_0217 NC_011992.1 238553 238888 D KEGG: ajs:Ajs_0202 hypothetical protein; hypothetical protein 238553..238888 Acidovorax ebreus TPSY 7383481 YP_002551703.1 CDS Dtpsy_0218 NC_011992.1 238913 239848 D PFAM: peptidase M48 Ste24p; KEGG: ajs:Ajs_0203 peptidase M48, Ste24p; peptidase M48 Ste24p 238913..239848 Acidovorax ebreus TPSY 7383482 YP_002551704.1 CDS Dtpsy_0219 NC_011992.1 239869 240411 R KEGG: neu:NE1984 putative transmembrane protein; hypothetical protein complement(239869..240411) Acidovorax ebreus TPSY 7383483 YP_002551705.1 CDS Dtpsy_0220 NC_011992.1 240494 241132 R PFAM: beta-lactamase domain protein; KEGG: ajs:Ajs_0228 beta-lactamase domain-containing protein; beta-lactamase domain protein complement(240494..241132) Acidovorax ebreus TPSY 7383484 YP_002551706.1 CDS Dtpsy_0222 NC_011992.1 241380 242468 R PFAM: transposase IS4 family protein; KEGG: ajs:Ajs_3918 transposase, IS4 family protein; transposase IS4 family protein complement(241380..242468) Acidovorax ebreus TPSY 7383486 YP_002551707.1 CDS Dtpsy_0223 NC_011992.1 242660 243361 R PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH; KEGG: ajs:Ajs_0229 GntR family transcriptional regulator; transcriptional regulator, GntR family complement(242660..243361) Acidovorax ebreus TPSY 7383487 YP_002551708.1 CDS Dtpsy_0224 NC_011992.1 243483 244673 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_0230 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase domain protein 243483..244673 Acidovorax ebreus TPSY 7383488 YP_002551709.1 CDS Dtpsy_0225 NC_011992.1 244670 245443 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ajs:Ajs_0231 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 244670..245443 Acidovorax ebreus TPSY 7383489 YP_002551710.1 CDS Dtpsy_0226 NC_011992.1 245440 246480 D PFAM: aminoglycoside phosphotransferase; KEGG: ajs:Ajs_0232 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 245440..246480 Acidovorax ebreus TPSY 7383490 YP_002551711.1 CDS Dtpsy_0227 NC_011992.1 246585 247388 R KEGG: ajs:Ajs_0233 exodeoxyribonuclease III Xth; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III Xth complement(246585..247388) Acidovorax ebreus TPSY 7383491 YP_002551712.1 CDS pyrE NC_011992.1 247399 248109 D involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 247399..248109 Acidovorax ebreus TPSY 7383492 YP_002551713.1 CDS Dtpsy_0229 NC_011992.1 248142 248858 D KEGG: ajs:Ajs_0235 hypothetical protein; hypothetical protein 248142..248858 Acidovorax ebreus TPSY 7383493 YP_002551714.1 CDS Dtpsy_0230 NC_011992.1 248930 250387 R TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB/Yqey domain protein; GatB region; GatB central domain protein; KEGG: ajs:Ajs_0236 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; glutamyl-tRNA(Gln) amidotransferase, B subunit complement(248930..250387) Acidovorax ebreus TPSY 7383494 YP_002551715.1 CDS gatA NC_011992.1 250390 251892 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A complement(250390..251892) Acidovorax ebreus TPSY 7383495 YP_002551716.1 CDS Dtpsy_0232 NC_011992.1 251903 252202 R TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; KEGG: ajs:Ajs_0238 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; glutamyl-tRNA(Gln) amidotransferase, C subunit complement(251903..252202) Acidovorax ebreus TPSY 7383496 YP_002551717.1 CDS Dtpsy_0233 NC_011992.1 252408 253451 D functions in MreBCD complex in some organisms; rod shape-determining protein MreB 252408..253451 Acidovorax ebreus TPSY 7383497 YP_002551718.1 CDS Dtpsy_0234 NC_011992.1 253481 254398 D in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 253481..254398 Acidovorax ebreus TPSY 7383498 YP_002551719.1 CDS Dtpsy_0235 NC_011992.1 254395 254916 D TIGRFAM: rod shape-determining protein MreD; KEGG: ajs:Ajs_0241 putative rod shape-determining MreD transmembrane protein; rod shape-determining protein MreD 254395..254916 Acidovorax ebreus TPSY 7383499 YP_002551720.1 CDS Dtpsy_0236 NC_011992.1 254944 256884 D KEGG: ajs:Ajs_0242 peptidoglycan glycosyltransferase; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; penicillin-binding protein 2 254944..256884 Acidovorax ebreus TPSY 7383500 YP_002551721.1 CDS Dtpsy_0237 NC_011992.1 256901 257800 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: ajs:Ajs_0243 hypothetical protein; protein of unknown function DUF6 transmembrane complement(256901..257800) Acidovorax ebreus TPSY 7383501 YP_002551722.1 CDS Dtpsy_0238 NC_011992.1 257933 258685 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_0244 ABC transporter related; ABC transporter related complement(257933..258685) Acidovorax ebreus TPSY 7383502 YP_002551723.1 CDS Dtpsy_0239 NC_011992.1 258682 259464 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_0245 polar amino acid ABC transporter, inner membrane subunit; polar amino acid ABC transporter, inner membrane subunit complement(258682..259464) Acidovorax ebreus TPSY 7383823 YP_002551724.1 CDS Dtpsy_0240 NC_011992.1 259504 260265 R PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: ajs:Ajs_0246 extracellular solute-binding protein; extracellular solute-binding protein family 3 complement(259504..260265) Acidovorax ebreus TPSY 7383824 YP_002551725.1 CDS Dtpsy_0241 NC_011992.1 260431 261351 R TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: ajs:Ajs_0247 arginase; arginase complement(260431..261351) Acidovorax ebreus TPSY 7383825 YP_002551726.1 CDS Dtpsy_0242 NC_011992.1 261389 262147 R PFAM: protein of unknown function DUF81; KEGG: ajs:Ajs_0248 hypothetical protein; protein of unknown function DUF81 complement(261389..262147) Acidovorax ebreus TPSY 7383826 YP_002551727.1 CDS Dtpsy_0243 NC_011992.1 262447 264141 R PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: ajs:Ajs_0249 glucose-methanol-choline oxidoreductase; glucose-methanol-choline oxidoreductase complement(262447..264141) Acidovorax ebreus TPSY 7383827 YP_002551728.1 CDS Dtpsy_0244 NC_011992.1 264477 265595 D PFAM: protein of unknown function DUF140; KEGG: ajs:Ajs_0250 hypothetical protein; protein of unknown function DUF140 264477..265595 Acidovorax ebreus TPSY 7383828 YP_002551729.1 CDS Dtpsy_0245 NC_011992.1 265598 266440 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_0251 ABC transporter related; ABC transporter related 265598..266440 Acidovorax ebreus TPSY 7383829 YP_002551730.1 CDS Dtpsy_0246 NC_011992.1 266440 267417 D PFAM: Mammalian cell entry related domain protein; KEGG: ajs:Ajs_0252 hypothetical protein; Mammalian cell entry related domain protein 266440..267417 Acidovorax ebreus TPSY 7383830 YP_002551731.1 CDS Dtpsy_0247 NC_011992.1 267438 268112 D PFAM: protein of unknown function DUF330; KEGG: ajs:Ajs_0253 putative lipoprotein; protein of unknown function DUF330 267438..268112 Acidovorax ebreus TPSY 7383831 YP_002551732.1 CDS Dtpsy_0248 NC_011992.1 268088 268273 D hypothetical protein 268088..268273 Acidovorax ebreus TPSY 7383832 YP_002551733.1 CDS Dtpsy_0249 NC_011992.1 268358 268573 D PFAM: CsbD family protein; KEGG: ajs:Ajs_0254 CsbD family protein; CsbD family protein 268358..268573 Acidovorax ebreus TPSY 7383833 YP_002551734.1 CDS Dtpsy_0250 NC_011992.1 268650 269228 D KEGG: ajs:Ajs_0255 hypothetical protein; hypothetical protein 268650..269228 Acidovorax ebreus TPSY 7383834 YP_002551735.1 CDS Dtpsy_0251 NC_011992.1 269376 269882 D TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: ajs:Ajs_0256 hemerythrin-like metal-binding protein; hemerythrin-like metal-binding protein 269376..269882 Acidovorax ebreus TPSY 7383835 YP_002551736.1 CDS Dtpsy_0252 NC_011992.1 270065 270997 D KEGG: ajs:Ajs_0257 diguanylate cyclase with PAS/PAC sensor; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; GGDEF domain containing protein; PAC repeat-containing protein; diguanylate cyclase with PAS/PAC sensor 270065..270997 Acidovorax ebreus TPSY 7383836 YP_002551737.1 CDS Dtpsy_0253 NC_011992.1 271001 271639 R PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: ajs:Ajs_0258 multiple antibiotic resistance (MarC)-related proteins; multiple antibiotic resistance (MarC)-related protein complement(271001..271639) Acidovorax ebreus TPSY 7383837 YP_002551738.1 CDS Dtpsy_0254 NC_011992.1 271639 272385 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ajs:Ajs_0259 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(271639..272385) Acidovorax ebreus TPSY 7383838 YP_002551739.1 CDS Dtpsy_0255 NC_011992.1 272493 273182 D PFAM: dienelactone hydrolase; KEGG: ajs:Ajs_0260 carboxymethylenebutenolidase; Carboxymethylenebutenolidase 272493..273182 Acidovorax ebreus TPSY 7383839 YP_002551740.1 CDS Dtpsy_0256 NC_011992.1 273270 274838 R TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_0261 EmrB/QacA family drug resistance transporter; drug resistance transporter, EmrB/QacA subfamily complement(273270..274838) Acidovorax ebreus TPSY 7383840 YP_002551741.1 CDS Dtpsy_0257 NC_011992.1 274849 276057 R PFAM: secretion protein HlyD family protein; KEGG: ajs:Ajs_0262 secretion protein HlyD family protein; secretion protein HlyD family protein complement(274849..276057) Acidovorax ebreus TPSY 7383841 YP_002551742.1 CDS Dtpsy_0258 NC_011992.1 276096 277649 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: ajs:Ajs_0263 RND efflux system outer membrane lipoprotein; RND efflux system, outer membrane lipoprotein, NodT family complement(276096..277649) Acidovorax ebreus TPSY 7383842 YP_002551743.1 CDS Dtpsy_0259 NC_011992.1 277708 278223 R PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: ajs:Ajs_0264 MarR family transcriptional regulator; transcriptional regulator, MarR family complement(277708..278223) Acidovorax ebreus TPSY 7383843 YP_002551744.1 CDS Dtpsy_0260 NC_011992.1 278328 279533 R PFAM: Mg2 transporter protein CorA family protein; KEGG: ajs:Ajs_0265 Mg2+ transporter protein, CorA family protein; Mg2 transporter protein CorA family protein complement(278328..279533) Acidovorax ebreus TPSY 7383844 YP_002551745.1 CDS Dtpsy_0261 NC_011992.1 279573 280580 R catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase complement(279573..280580) Acidovorax ebreus TPSY 7383845 YP_002551746.1 CDS Dtpsy_0262 NC_011992.1 280741 281454 D KEGG: ajs:Ajs_0267 biotin/lipoate A/B protein ligase; biotin/lipoate A/B protein ligase 280741..281454 Acidovorax ebreus TPSY 7383846 YP_002551747.1 CDS Dtpsy_0263 NC_011992.1 281664 282092 D PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0268 hypothetical protein; hypothetical protein 281664..282092 Acidovorax ebreus TPSY 7383847 YP_002551748.1 CDS Dtpsy_0264 NC_011992.1 282190 283287 D PFAM: VanZ family protein; KEGG: ajs:Ajs_0269 VanZ family protein; VanZ family protein 282190..283287 Acidovorax ebreus TPSY 7383848 YP_002551749.1 CDS Dtpsy_0265 NC_011992.1 283297 283638 D KEGG: ajs:Ajs_0270 ferredoxin-like protein; ferredoxin-like protein 283297..283638 Acidovorax ebreus TPSY 7383849 YP_002551750.1 CDS Dtpsy_0266 NC_011992.1 283723 284370 D KEGG: ajs:Ajs_0271 putative transmembrane protein; putative transmembrane protein 283723..284370 Acidovorax ebreus TPSY 7383850 YP_002551751.1 CDS Dtpsy_0267 NC_011992.1 284449 285612 D PFAM: beta-lactamase; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: ajs:Ajs_0272 penicillin-binding protein 6; Serine-type D-Ala-D-Ala carboxypeptidase 284449..285612 Acidovorax ebreus TPSY 7383851 YP_002551752.1 CDS rpsL NC_011992.1 285763 286140 D interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 285763..286140 Acidovorax ebreus TPSY 7383852 YP_002551753.1 CDS Dtpsy_0269 NC_011992.1 286311 286784 D binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 286311..286784 Acidovorax ebreus TPSY 7383853 YP_002551754.1 CDS Dtpsy_0270 NC_011992.1 286942 289050 D EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 286942..289050 Acidovorax ebreus TPSY 7383854 YP_002551755.1 CDS Dtpsy_0271 NC_011992.1 289235 290425 D EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 289235..290425 Acidovorax ebreus TPSY 7383855 YP_002551756.1 CDS rpsJ NC_011992.1 290453 290764 D NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 290453..290764 Acidovorax ebreus TPSY 7383856 YP_002551757.1 CDS rplC NC_011992.1 291016 291690 D binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 291016..291690 Acidovorax ebreus TPSY 7383857 YP_002551758.1 CDS rplD NC_011992.1 291690 292310 D L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 291690..292310 Acidovorax ebreus TPSY 7383858 YP_002551759.1 CDS rplW NC_011992.1 292307 292621 D binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 292307..292621 Acidovorax ebreus TPSY 7383859 YP_002551760.1 CDS rplB NC_011992.1 292625 293449 D one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 292625..293449 Acidovorax ebreus TPSY 7383860 YP_002551761.1 CDS rpsS NC_011992.1 293460 293738 D protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 293460..293738 Acidovorax ebreus TPSY 7383861 YP_002551762.1 CDS rplV NC_011992.1 293748 294080 D binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 293748..294080 Acidovorax ebreus TPSY 7383862 YP_002551763.1 CDS rpsC NC_011992.1 294097 294963 D forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 294097..294963 Acidovorax ebreus TPSY 7383863 YP_002551764.1 CDS rplP NC_011992.1 294966 295382 D located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 294966..295382 Acidovorax ebreus TPSY 7383864 YP_002551765.1 CDS Dtpsy_0281 NC_011992.1 295395 295592 D one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 295395..295592 Acidovorax ebreus TPSY 7383865 YP_002551766.1 CDS rpsQ NC_011992.1 295602 295871 D primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 295602..295871 Acidovorax ebreus TPSY 7383866 YP_002551767.1 CDS Dtpsy_0283 NC_011992.1 295986 296492 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: ajs:Ajs_0288 redoxin domain-containing protein; Redoxin domain protein 295986..296492 Acidovorax ebreus TPSY 7383867 YP_002551768.1 CDS Dtpsy_0284 NC_011992.1 296636 297151 R PFAM: GCN5-related N-acetyltransferase; KEGG: ajs:Ajs_0289 GCN5-related N-acetyltransferase; GCN5-related N-acetyltransferase complement(296636..297151) Acidovorax ebreus TPSY 7383868 YP_002551769.1 CDS Dtpsy_0285 NC_011992.1 297193 297861 R PFAM: cytochrome B561; KEGG: ajs:Ajs_0290 cytochrome b561; cytochrome B561 complement(297193..297861) Acidovorax ebreus TPSY 7383869 YP_002551770.1 CDS Dtpsy_0286 NC_011992.1 298042 298503 D PFAM: cytochrome c prime; KEGG: ajs:Ajs_0291 cytochrome c, class II; cytochrome c prime 298042..298503 Acidovorax ebreus TPSY 7383870 YP_002551771.1 CDS Dtpsy_0287 NC_011992.1 298599 299102 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: ajs:Ajs_0292 redoxin domain-containing protein; Redoxin domain protein complement(298599..299102) Acidovorax ebreus TPSY 7383871 YP_002551772.1 CDS Dtpsy_0288 NC_011992.1 299356 299919 D KEGG: ajs:Ajs_0293 hypothetical protein; hypothetical protein 299356..299919 Acidovorax ebreus TPSY 7383872 YP_002551773.1 CDS Dtpsy_0289 NC_011992.1 299916 301154 D PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_0294 major facilitator superfamily transporter; major facilitator superfamily MFS_1 299916..301154 Acidovorax ebreus TPSY 7383873 YP_002551774.1 CDS Dtpsy_0290 NC_011992.1 301151 301600 D PFAM: PTS system fructose subfamily IIA component; KEGG: ajs:Ajs_0295 PTS system fructose subfamily IIA component; PTS system fructose subfamily IIA component 301151..301600 Acidovorax ebreus TPSY 7383874 YP_002551775.1 CDS Dtpsy_0291 NC_011992.1 301569 301838 D TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: ajs:Ajs_0296 phosphotransferase system, phosphocarrier protein HPr; phosphocarrier, HPr family 301569..301838 Acidovorax ebreus TPSY 7383875 YP_002551776.1 CDS Dtpsy_0292 NC_011992.1 301857 303626 D TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: ajs:Ajs_0297 phosphoenolpyruvate--protein phosphotransferase; phosphoenolpyruvate-protein phosphotransferase 301857..303626 Acidovorax ebreus TPSY 7383876 YP_002551777.1 CDS Dtpsy_0293 NC_011992.1 303698 304678 R catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase complement(303698..304678) Acidovorax ebreus TPSY 7383877 YP_002551778.1 CDS Dtpsy_0294 NC_011992.1 304696 305376 R lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; lipoate-protein ligase B complement(304696..305376) Acidovorax ebreus TPSY 7383878 YP_002551779.1 CDS Dtpsy_0295 NC_011992.1 305400 305696 R PFAM: protein of unknown function DUF493; KEGG: ajs:Ajs_0300 hypothetical protein; protein of unknown function DUF493 complement(305400..305696) Acidovorax ebreus TPSY 7383879 YP_002551780.1 CDS Dtpsy_0296 NC_011992.1 305937 306425 D PFAM: ATP synthase I chain; KEGG: ajs:Ajs_0301 putative ATP synthase protein I; ATP synthase I chain 305937..306425 Acidovorax ebreus TPSY 7383880 YP_002551781.1 CDS Dtpsy_0297 NC_011992.1 306448 307311 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 306448..307311 Acidovorax ebreus TPSY 7383881 YP_002551782.1 CDS Dtpsy_0298 NC_011992.1 307363 307611 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 307363..307611 Acidovorax ebreus TPSY 7383882 YP_002551783.1 CDS Dtpsy_0299 NC_011992.1 307647 308117 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B 307647..308117 Acidovorax ebreus TPSY 7383883 YP_002551784.1 CDS Dtpsy_0300 NC_011992.1 308129 308671 D Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta 308129..308671 Acidovorax ebreus TPSY 7383884 YP_002551785.1 CDS Dtpsy_0301 NC_011992.1 308717 310276 D produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 308717..310276 Acidovorax ebreus TPSY 7383885 YP_002551786.1 CDS Dtpsy_0302 NC_011992.1 310295 311161 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 310295..311161 Acidovorax ebreus TPSY 7383886 YP_002551787.1 CDS Dtpsy_0303 NC_011992.1 311204 312610 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 311204..312610 Acidovorax ebreus TPSY 7383887 YP_002551788.1 CDS atpC NC_011992.1 312686 313102 D part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon 312686..313102 Acidovorax ebreus TPSY 7383888 YP_002551789.1 CDS Dtpsy_0305 NC_011992.1 313233 314333 D KEGG: ajs:Ajs_0310 putative mRNA 3-end processing factor; putative mRNA 3-end processing factor 313233..314333 Acidovorax ebreus TPSY 7383889 YP_002551790.1 CDS Dtpsy_0306 NC_011992.1 314333 316012 D catalyzes the ATP-dependent formation of a phosphodiester at the site of a single strand break in duplex DNA; ATP-dependent DNA ligase 314333..316012 Acidovorax ebreus TPSY 7383890 YP_002551791.1 CDS Dtpsy_0307 NC_011992.1 316104 319016 D PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein; SMART: helicase domain protein; DEAD-like helicases; KEGG: ajs:Ajs_0312 DEAD/DEAH box helicase domain-containing protein; DEAD/H associated domain protein 316104..319016 Acidovorax ebreus TPSY 7383891 YP_002551792.1 CDS Dtpsy_0308 NC_011992.1 319020 319694 D PFAM: metallophosphoesterase; KEGG: ajs:Ajs_0313 metallophosphoesterase; metallophosphoesterase 319020..319694 Acidovorax ebreus TPSY 7383892 YP_002551793.1 CDS Dtpsy_0309 NC_011992.1 319743 320294 R PFAM: protein of unknown function DUF477; KEGG: ajs:Ajs_0314 hypothetical protein; protein of unknown function DUF477 complement(319743..320294) Acidovorax ebreus TPSY 7383893 YP_002551794.1 CDS Dtpsy_0310 NC_011992.1 320320 321228 R PFAM: protein of unknown function DUF477; KEGG: ajs:Ajs_0315 hypothetical protein; protein of unknown function DUF477 complement(320320..321228) Acidovorax ebreus TPSY 7383894 YP_002551795.1 CDS Dtpsy_0311 NC_011992.1 321250 321855 R PFAM: LemA family protein; KEGG: ajs:Ajs_0316 LemA family protein; LemA family protein complement(321250..321855) Acidovorax ebreus TPSY 7383895 YP_002551796.1 CDS Dtpsy_0312 NC_011992.1 322000 322449 D KEGG: ajs:Ajs_0317 hypothetical protein; hypothetical protein 322000..322449 Acidovorax ebreus TPSY 7383896 YP_002551797.1 CDS Dtpsy_0313 NC_011992.1 322522 323526 D KEGG: ajs:Ajs_0318 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 322522..323526 Acidovorax ebreus TPSY 7383897 YP_002551798.1 CDS Dtpsy_0314 NC_011992.1 323567 324106 D KEGG: ajs:Ajs_0319 hypothetical protein; hypothetical protein 323567..324106 Acidovorax ebreus TPSY 7383898 YP_002551799.1 CDS Dtpsy_0315 NC_011992.1 324183 324722 R PFAM: cytochrome c class I; KEGG: ajs:Ajs_0320 cytochrome c, class I; cytochrome c class I complement(324183..324722) Acidovorax ebreus TPSY 7383899 YP_002551800.1 CDS Dtpsy_0316 NC_011992.1 324843 326288 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: ajs:Ajs_0321 RND efflux system outer membrane lipoprotein; RND efflux system, outer membrane lipoprotein, NodT family complement(324843..326288) Acidovorax ebreus TPSY 7383900 YP_002551801.1 CDS Dtpsy_0317 NC_011992.1 326313 329459 R TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: aav:Aave_0388 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; transporter, hydrophobe/amphiphile efflux-1 (HAE1) family complement(326313..329459) Acidovorax ebreus TPSY 7383901 YP_002551802.1 CDS Dtpsy_0318 NC_011992.1 329478 330788 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: ajs:Ajs_0323 RND family efflux transporter MFP subunit; efflux transporter, RND family, MFP subunit complement(329478..330788) Acidovorax ebreus TPSY 7383902 YP_002551803.1 CDS Dtpsy_0319 NC_011992.1 330960 331580 D PFAM: regulatory protein TetR; Tetracycline transcriptional repressor MAATS-type domain protein; KEGG: ajs:Ajs_0324 TetR family transcriptional regulator; transcriptional regulator, TetR family 330960..331580 Acidovorax ebreus TPSY 7383903 YP_002551804.1 CDS Dtpsy_0320 NC_011992.1 331879 332208 D KEGG: ajs:Ajs_0331 hypothetical protein; hypothetical protein 331879..332208 Acidovorax ebreus TPSY 7383665 YP_002551805.1 CDS Dtpsy_0321 NC_011992.1 332421 332882 D KEGG: ajs:Ajs_0332 hypothetical protein; hypothetical protein 332421..332882 Acidovorax ebreus TPSY 7385329 YP_002551806.1 CDS Dtpsy_0322 NC_011992.1 332946 334109 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: nmu:Nmul_A2149 zinc-containing alcohol dehydrogenase superfamily protein; Alcohol dehydrogenase GroES domain protein 332946..334109 Acidovorax ebreus TPSY 7385330 YP_002551807.1 CDS Dtpsy_0323 NC_011992.1 334242 334751 R KEGG: ajs:Ajs_0334 putative outer membrane protein; putative outer membrane protein complement(334242..334751) Acidovorax ebreus TPSY 7385331 YP_002551808.1 CDS Dtpsy_0324 NC_011992.1 334878 335645 R PFAM: glutamine amidotransferase class-II; KEGG: ajs:Ajs_0335 glutamine amidotransferase, class-II; glutamine amidotransferase class-II complement(334878..335645) Acidovorax ebreus TPSY 7385332 YP_002551809.1 CDS Dtpsy_0325 NC_011992.1 335679 335867 R 4-OT; member of subfamily 5; forms a dimer; the function in the Escherichia coli cell is unknown; 4-oxalocrotonate tautomerase complement(335679..335867) Acidovorax ebreus TPSY 7385333 YP_002551810.1 CDS Dtpsy_0326 NC_011992.1 335891 336127 R KEGG: ajs:Ajs_0337 hypothetical protein; hypothetical protein complement(335891..336127) Acidovorax ebreus TPSY 7385334 YP_002551811.1 CDS Dtpsy_0327 NC_011992.1 336235 338436 R catalyzes the formation of malate from glyoxylate and acetyl-CoA; malate synthase G complement(336235..338436) Acidovorax ebreus TPSY 7385335 YP_002551812.1 CDS Dtpsy_0328 NC_011992.1 338663 339601 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_0339 LysR family transcriptional regulator; transcriptional regulator, LysR family 338663..339601 Acidovorax ebreus TPSY 7385336 YP_002551813.1 CDS Dtpsy_0329 NC_011992.1 339693 340277 D KEGG: ajs:Ajs_0340 hypothetical protein; hypothetical protein 339693..340277 Acidovorax ebreus TPSY 7385337 YP_002551814.1 CDS Dtpsy_0330 NC_011992.1 340317 340772 D KEGG: ajs:Ajs_0341 putative transmembrane protein; putative transmembrane protein 340317..340772 Acidovorax ebreus TPSY 7385338 YP_002551815.1 CDS Dtpsy_0331 NC_011992.1 340873 341205 R PFAM: PsiF repeat protein; KEGG: ajs:Ajs_0342 PsiF repeat-containing protein; PsiF repeat protein complement(340873..341205) Acidovorax ebreus TPSY 7385339 YP_002551816.1 CDS argS NC_011992.1 341331 343034 D catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 341331..343034 Acidovorax ebreus TPSY 7385340 YP_002551817.1 CDS Dtpsy_0333 NC_011992.1 343047 343673 D PFAM: Sporulation domain protein; KEGG: ajs:Ajs_0344 sporulation domain-containing protein; Sporulation domain protein 343047..343673 Acidovorax ebreus TPSY 7385341 YP_002551818.1 CDS Dtpsy_0334 NC_011992.1 343732 344382 D PFAM: DSBA oxidoreductase; KEGG: ajs:Ajs_0345 DsbA oxidoreductase; DSBA oxidoreductase 343732..344382 Acidovorax ebreus TPSY 7385342 YP_002551819.1 CDS Dtpsy_0335 NC_011992.1 344532 345215 D TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA family protein; KEGG: ajs:Ajs_0346 OstA family protein; lipopolysaccharide transport periplasmic protein LptA 344532..345215 Acidovorax ebreus TPSY 7385343 YP_002551820.1 CDS Dtpsy_0336 NC_011992.1 345239 345991 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_0347 ABC transporter related; ABC transporter related 345239..345991 Acidovorax ebreus TPSY 7385344 YP_002551821.1 CDS Dtpsy_0337 NC_011992.1 346044 347621 D TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor; sigma-54 factor core-binding region; sigma-54 DNA-binding domain protein; KEGG: ajs:Ajs_0348 RNA polymerase, sigma 54 subunit, RpoN; RNA polymerase, sigma 54 subunit, RpoN 346044..347621 Acidovorax ebreus TPSY 7385345 YP_002551822.1 CDS Dtpsy_0338 NC_011992.1 347625 348068 D KEGG: ajs:Ajs_0349 hypothetical protein; hypothetical protein 347625..348068 Acidovorax ebreus TPSY 7385346 YP_002551823.1 CDS Dtpsy_0339 NC_011992.1 348065 349378 D PFAM: putative RNA methylase; THUMP domain protein; KEGG: ajs:Ajs_0350 putative RNA methylase; putative RNA methylase 348065..349378 Acidovorax ebreus TPSY 7385347 YP_002551824.1 CDS Dtpsy_0340 NC_011992.1 349368 349853 D KEGG: ajs:Ajs_0351 hypothetical protein; hypothetical protein 349368..349853 Acidovorax ebreus TPSY 7385348 YP_002551825.1 CDS Dtpsy_0341 NC_011992.1 349841 351142 D PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); KEGG: ajs:Ajs_0352 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 349841..351142 Acidovorax ebreus TPSY 7385349 YP_002551826.1 CDS Dtpsy_0342 NC_011992.1 351624 352454 D PFAM: SEC-C motif domain protein; KEGG: ajs:Ajs_0353 SecC motif-containing protein; SEC-C motif domain protein 351624..352454 Acidovorax ebreus TPSY 7385350 YP_002551827.1 CDS Dtpsy_0343 NC_011992.1 352641 353210 R PFAM: CinA domain protein; KEGG: ajs:Ajs_0354 CinA domain-containing protein; CinA domain protein complement(352641..353210) Acidovorax ebreus TPSY 7385351 YP_002551828.1 CDS Dtpsy_0344 NC_011992.1 353216 353746 R PFAM: phosphatidylglycerophosphatase A; KEGG: ajs:Ajs_0355 phosphatidylglycerophosphatase; phosphatidylglycerophosphatase A complement(353216..353746) Acidovorax ebreus TPSY 7385352 YP_002551829.1 CDS Dtpsy_0345 NC_011992.1 353810 354784 R KEGG: ajs:Ajs_0356 thiamine-monophosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; thiamine-monophosphate kinase complement(353810..354784) Acidovorax ebreus TPSY 7385353 YP_002551830.1 CDS Dtpsy_0346 NC_011992.1 354800 355924 R ATP-dependent; carboxylate-amine ligase with weak glutamate--cysteine ligase activity; carboxylate-amine ligase complement(354800..355924) Acidovorax ebreus TPSY 7385354 YP_002551831.1 CDS Dtpsy_0347 NC_011992.1 355914 357179 R PFAM: sodium/hydrogen exchanger; KEGG: ajs:Ajs_0358 sodium/hydrogen exchanger; sodium/hydrogen exchanger complement(355914..357179) Acidovorax ebreus TPSY 7385355 YP_002551832.1 CDS Dtpsy_0348 NC_011992.1 357361 359343 R KEGG: ajs:Ajs_0359 putative site-specific recombinase transmembrane protein; putative site-specific recombinase transmembrane protein complement(357361..359343) Acidovorax ebreus TPSY 7385356 YP_002551833.1 CDS apaG NC_011992.1 359340 359747 R protein associated with Co2+ and Mg2+ efflux; ApaG complement(359340..359747) Acidovorax ebreus TPSY 7385357 YP_002551834.1 CDS Dtpsy_0350 NC_011992.1 359869 360549 D KEGG: ajs:Ajs_0361 ribulose-5-phosphate 3-epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase 359869..360549 Acidovorax ebreus TPSY 7385358 YP_002551835.1 CDS Dtpsy_0351 NC_011992.1 360589 360954 R KEGG: ajs:Ajs_0362 hypothetical protein; hypothetical protein complement(360589..360954) Acidovorax ebreus TPSY 7385359 YP_002551836.1 CDS Dtpsy_0352 NC_011992.1 361121 361846 D TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ajs:Ajs_0363 phosphoglycolate phosphatase; phosphoglycolate phosphatase 361121..361846 Acidovorax ebreus TPSY 7385360 YP_002551837.1 CDS Dtpsy_0353 NC_011992.1 361898 363592 R PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; Cache type 2 domain protein; SMART: chemotaxis sensory transducer; KEGG: aav:Aave_2643 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer with Cache sensor complement(361898..363592) Acidovorax ebreus TPSY 7385361 YP_002551838.1 CDS Dtpsy_0354 NC_011992.1 363628 365364 R PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; SMART: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: ajs:Ajs_0364 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(363628..365364) Acidovorax ebreus TPSY 7385362 YP_002551839.1 CDS Dtpsy_0355 NC_011992.1 365486 366088 R KEGG: ajs:Ajs_0365 putative lipoprotein transmembrane; putative lipoprotein transmembrane complement(365486..366088) Acidovorax ebreus TPSY 7385363 YP_002551840.1 CDS Dtpsy_0356 NC_011992.1 366445 367944 D with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I 366445..367944 Acidovorax ebreus TPSY 7385364 YP_002551841.1 CDS Dtpsy_0357 NC_011992.1 367941 368285 D PFAM: Chorismate mutase; KEGG: ajs:Ajs_0367 chorismate mutase; Chorismate mutase 367941..368285 Acidovorax ebreus TPSY 7385365 YP_002551842.1 CDS Dtpsy_0358 NC_011992.1 368282 368854 D TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; anthranilate synthase component II 368282..368854 Acidovorax ebreus TPSY 7385366 YP_002551843.1 CDS trpD NC_011992.1 368952 369986 D Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 368952..369986 Acidovorax ebreus TPSY 7385367 YP_002551844.1 CDS Dtpsy_0360 NC_011992.1 369997 370170 D hypothetical protein 369997..370170 Acidovorax ebreus TPSY 7385368 YP_002551845.1 CDS trpC NC_011992.1 370241 371041 D involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; indole-3-glycerol-phosphate synthase 370241..371041 Acidovorax ebreus TPSY 7385369 YP_002551846.1 CDS Dtpsy_0362 NC_011992.1 371180 373852 D KEGG: ajs:Ajs_0371 diguanylate cyclase with PAS/PAC sensor; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; GGDEF domain containing protein; PAC repeat-containing protein; diguanylate cyclase with PAS/PAC sensor 371180..373852 Acidovorax ebreus TPSY 7385370 YP_002551847.1 CDS Dtpsy_0363 NC_011992.1 373907 374620 D Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 373907..374620 Acidovorax ebreus TPSY 7385371 YP_002551848.1 CDS Dtpsy_0364 NC_011992.1 374621 375508 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: ajs:Ajs_0373 hypothetical protein; protein of unknown function DUF6 transmembrane complement(374621..375508) Acidovorax ebreus TPSY 7385372 YP_002551849.1 CDS Dtpsy_0365 NC_011992.1 375505 376605 R TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; KEGG: ajs:Ajs_0374 S-adenosylmethionine--tRNA-ribosyltransferase-isomerase; S-adenosylmethionine/tRNA-ribosyltransferase- isomerase complement(375505..376605) Acidovorax ebreus TPSY 7385373 YP_002551850.1 CDS Dtpsy_0366 NC_011992.1 376709 377968 R KEGG: aav:Aave_0592 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; Metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase complement(376709..377968) Acidovorax ebreus TPSY 7385374 YP_002551851.1 CDS Dtpsy_0367 NC_011992.1 378027 380198 D catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 378027..380198 Acidovorax ebreus TPSY 7385375 YP_002551852.1 CDS Dtpsy_0368 NC_011992.1 380267 381232 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_0377 LysR family transcriptional regulator; transcriptional regulator, LysR family 380267..381232 Acidovorax ebreus TPSY 7385376 YP_002551853.1 CDS Dtpsy_0369 NC_011992.1 381310 381828 D PFAM: Ferritin Dps family protein; KEGG: ajs:Ajs_0378 ferritin, Dps family protein; Ferritin Dps family protein 381310..381828 Acidovorax ebreus TPSY 7385377 YP_002551854.1 CDS Dtpsy_0370 NC_011992.1 381855 383393 D PFAM: CHAD domain containing protein; adenylate cyclase; KEGG: ajs:Ajs_0379 adenylate cyclase; CHAD domain containing protein 381855..383393 Acidovorax ebreus TPSY 7385378 YP_002551855.1 CDS Dtpsy_0371 NC_011992.1 383597 384469 D TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; PFAM: UbiA prenyltransferase; KEGG: ajs:Ajs_0380 4-hydroxybenzoate octaprenyltransferase; 4-hydroxybenzoate polyprenyl transferase 383597..384469 Acidovorax ebreus TPSY 7385379 YP_002551856.1 CDS Dtpsy_0372 NC_011992.1 384525 385391 R KEGG: ajs:Ajs_0381 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; pyrroline-5-carboxylate reductase complement(384525..385391) Acidovorax ebreus TPSY 7385380 YP_002551857.1 CDS Dtpsy_0373 NC_011992.1 385521 387017 R TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: ajs:Ajs_0382 glycerol kinase; glycerol kinase complement(385521..387017) Acidovorax ebreus TPSY 7385381 YP_002551858.1 CDS Dtpsy_0374 NC_011992.1 387067 387855 R PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; regulatory protein Crp; KEGG: ajs:Ajs_0383 DeoR family transcriptional regulator; transcriptional regulator, DeoR family complement(387067..387855) Acidovorax ebreus TPSY 7385382 YP_002551859.1 CDS Dtpsy_0375 NC_011992.1 388030 389124 D PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: dac:Daci_1025 ABC transporter related; ABC transporter related 388030..389124 Acidovorax ebreus TPSY 7385383 YP_002551860.1 CDS Dtpsy_0376 NC_011992.1 389126 390196 D PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ajs:Ajs_0385 ABC transporter related; ABC transporter related 389126..390196 Acidovorax ebreus TPSY 7385384 YP_002551861.1 CDS Dtpsy_0377 NC_011992.1 390193 390345 D hypothetical protein 390193..390345 Acidovorax ebreus TPSY 7385385 YP_002551862.1 CDS Dtpsy_0378 NC_011992.1 390338 391234 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_0386 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 390338..391234 Acidovorax ebreus TPSY 7385386 YP_002551863.1 CDS Dtpsy_0379 NC_011992.1 391227 392039 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_0387 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 391227..392039 Acidovorax ebreus TPSY 7385387 YP_002551864.1 CDS Dtpsy_0380 NC_011992.1 392052 392360 D KEGG: ajs:Ajs_0388 putative integral membrane protein; putative integral membrane protein 392052..392360 Acidovorax ebreus TPSY 7385388 YP_002551865.1 CDS Dtpsy_0381 NC_011992.1 392534 394267 D KEGG: ajs:Ajs_0389 extracellular solute-binding protein; extracellular solute-binding protein 392534..394267 Acidovorax ebreus TPSY 7385389 YP_002551866.1 CDS Dtpsy_0382 NC_011992.1 394369 395967 D PFAM: FAD dependent oxidoreductase; KEGG: ajs:Ajs_0390 FAD dependent oxidoreductase; FAD dependent oxidoreductase 394369..395967 Acidovorax ebreus TPSY 7385390 YP_002551867.1 CDS rplN NC_011992.1 396159 396527 D binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 396159..396527 Acidovorax ebreus TPSY 7385391 YP_002551868.1 CDS rplX NC_011992.1 396538 396858 D assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 396538..396858 Acidovorax ebreus TPSY 7385392 YP_002551869.1 CDS rplE NC_011992.1 396868 397407 D part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 396868..397407 Acidovorax ebreus TPSY 7385393 YP_002551870.1 CDS rpsN NC_011992.1 397417 397722 D located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 397417..397722 Acidovorax ebreus TPSY 7385394 YP_002551871.1 CDS rpsH NC_011992.1 397743 398138 D binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 397743..398138 Acidovorax ebreus TPSY 7385395 YP_002551872.1 CDS rplF NC_011992.1 398163 398696 D ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 398163..398696 Acidovorax ebreus TPSY 7385396 YP_002551873.1 CDS rplR NC_011992.1 398708 399073 D binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 398708..399073 Acidovorax ebreus TPSY 7385397 YP_002551874.1 CDS rpsE NC_011992.1 399091 399612 D located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 399091..399612 Acidovorax ebreus TPSY 7385398 YP_002551875.1 CDS rpmD NC_011992.1 399627 399809 D L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 399627..399809 Acidovorax ebreus TPSY 7385399 YP_002551876.1 CDS rplO NC_011992.1 399820 400251 D late assembly protein; 50S ribosomal protein L15 399820..400251 Acidovorax ebreus TPSY 7385400 YP_002551877.1 CDS secY NC_011992.1 400275 401594 D forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 400275..401594 Acidovorax ebreus TPSY 7385401 YP_002551878.1 CDS rpmJ NC_011992.1 401739 401852 D smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 401739..401852 Acidovorax ebreus TPSY 7385402 YP_002551879.1 CDS rpsM NC_011992.1 401876 402241 D located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 401876..402241 Acidovorax ebreus TPSY 7385403 YP_002551880.1 CDS Dtpsy_0396 NC_011992.1 402259 402663 D located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 402259..402663 Acidovorax ebreus TPSY 7385404 YP_002551881.1 CDS rpsD NC_011992.1 402752 403375 D primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 402752..403375 Acidovorax ebreus TPSY 7385405 YP_002551882.1 CDS Dtpsy_0398 NC_011992.1 403487 404479 D catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 403487..404479 Acidovorax ebreus TPSY 7385406 YP_002551883.1 CDS rplQ NC_011992.1 404569 404958 D is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 404569..404958 Acidovorax ebreus TPSY 7385407 YP_002551884.1 CDS Dtpsy_0400 NC_011992.1 405209 406549 R KEGG: ajs:Ajs_0408 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; nucleotide sugar dehydrogenase complement(405209..406549) Acidovorax ebreus TPSY 7385409 YP_002551885.1 CDS Dtpsy_0401 NC_011992.1 406546 407556 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: ajs:Ajs_0409 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(406546..407556) Acidovorax ebreus TPSY 7383988 YP_002551886.1 CDS Dtpsy_0402 NC_011992.1 407553 409070 R KEGG: ajs:Ajs_0410 glycosyltransferase; glycosyltransferase complement(407553..409070) Acidovorax ebreus TPSY 7383989 YP_002551887.1 CDS Dtpsy_0403 NC_011992.1 409183 410214 D PFAM: glycosyl transferase family 2; KEGG: ajs:Ajs_0411 glycosyl transferase family protein; glycosyl transferase family 2 409183..410214 Acidovorax ebreus TPSY 7383990 YP_002551888.1 CDS Dtpsy_0404 NC_011992.1 410232 411140 D KEGG: ajs:Ajs_0412 hypothetical protein; hypothetical protein 410232..411140 Acidovorax ebreus TPSY 7383991 YP_002551889.1 CDS Dtpsy_0405 NC_011992.1 411349 412263 R PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: ajs:Ajs_0413 uroporphyrin-III C/tetrapyrrole methyltransferase; Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase complement(411349..412263) Acidovorax ebreus TPSY 7383992 YP_002551890.1 CDS Dtpsy_0406 NC_011992.1 412287 412685 D PFAM: protein of unknown function UPF0102; KEGG: ajs:Ajs_0414 hypothetical protein; hypothetical protein 412287..412685 Acidovorax ebreus TPSY 7383993 YP_002551891.1 CDS Dtpsy_0407 NC_011992.1 412744 413337 D KEGG: ajs:Ajs_0415 phosphoheptose isomerase; phosphoheptose isomerase 412744..413337 Acidovorax ebreus TPSY 7383994 YP_002551892.1 CDS Dtpsy_0408 NC_011992.1 413334 414008 D PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: ajs:Ajs_0416 transport-associated; transport-associated 413334..414008 Acidovorax ebreus TPSY 7383995 YP_002551893.1 CDS Dtpsy_0409 NC_011992.1 414106 415035 R PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: ajs:Ajs_0417 3-hydroxyisobutyrate dehydrogenase; 3-hydroxyisobutyrate dehydrogenase complement(414106..415035) Acidovorax ebreus TPSY 7383996 YP_002551894.1 CDS Dtpsy_0410 NC_011992.1 415099 416235 R TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: ajs:Ajs_0418 twitching motility protein; twitching motility protein complement(415099..416235) Acidovorax ebreus TPSY 7383997 YP_002551895.1 CDS Dtpsy_0411 NC_011992.1 416282 416911 R PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: ajs:Ajs_0419 cyclic nucleotide-binding protein; cyclic nucleotide-binding protein complement(416282..416911) Acidovorax ebreus TPSY 7383998 YP_002551896.1 CDS Dtpsy_0412 NC_011992.1 416988 418031 R KEGG: ajs:Ajs_0420 twitching motility protein; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase; twitching motility protein complement(416988..418031) Acidovorax ebreus TPSY 7383999 YP_002551897.1 CDS Dtpsy_0413 NC_011992.1 418071 418787 D PFAM: alanine racemase domain protein; KEGG: ajs:Ajs_0421 alanine racemase domain-containing protein; alanine racemase domain protein 418071..418787 Acidovorax ebreus TPSY 7384000 YP_002551898.1 CDS Dtpsy_0414 NC_011992.1 418826 419962 D PFAM: aminotransferase class V; aminotransferase class-III; KEGG: ajs:Ajs_0422 aminotransferase, class V; aminotransferase class V 418826..419962 Acidovorax ebreus TPSY 7384001 YP_002551899.1 CDS Dtpsy_0415 NC_011992.1 420030 421388 D PFAM: protein of unknown function DUF445; KEGG: ajs:Ajs_0423 hypothetical protein; protein of unknown function DUF445 420030..421388 Acidovorax ebreus TPSY 7384002 YP_002551900.1 CDS Dtpsy_0416 NC_011992.1 421448 421903 R KEGG: ajs:Ajs_0424 hypothetical protein; hypothetical protein complement(421448..421903) Acidovorax ebreus TPSY 7384003 YP_002551901.1 CDS Dtpsy_0417 NC_011992.1 421996 423498 R PFAM: FAD linked oxidase domain protein; KEGG: ajs:Ajs_0425 FAD linked oxidase domain-containing protein; FAD linked oxidase domain protein complement(421996..423498) Acidovorax ebreus TPSY 7384004 YP_002551902.1 CDS Dtpsy_0418 NC_011992.1 423656 424576 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_0647 transcriptional regulator, LysR family; transcriptional regulator, LysR family complement(423656..424576) Acidovorax ebreus TPSY 7384005 YP_002551903.1 CDS purU NC_011992.1 424601 425449 R produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase complement(424601..425449) Acidovorax ebreus TPSY 7384006 YP_002551904.1 CDS Dtpsy_0420 NC_011992.1 425450 427822 D KEGG: aav:Aave_0649 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; GGDEF domain containing protein; PAC repeat-containing protein; EAL domain protein; diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 425450..427822 Acidovorax ebreus TPSY 7384007 YP_002551905.1 CDS Dtpsy_0421 NC_011992.1 427850 428767 R PFAM: protein of unknown function DUF399; KEGG: ajs:Ajs_0430 hypothetical protein; protein of unknown function DUF399 complement(427850..428767) Acidovorax ebreus TPSY 7384008 YP_002551906.1 CDS Dtpsy_0422 NC_011992.1 428981 431422 D TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase large subunit domain protein; KEGG: ajs:Ajs_0431 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 428981..431422 Acidovorax ebreus TPSY 7384009 YP_002551907.1 CDS Dtpsy_0423 NC_011992.1 431593 433509 D PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: ajs:Ajs_0432 signal transduction histidine kinase, nitrate/nitrite-specific, NarQ; GAF sensor signal transduction histidine kinase 431593..433509 Acidovorax ebreus TPSY 7384010 YP_002551908.1 CDS Dtpsy_0424 NC_011992.1 433506 434177 D PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; response regulator receiver; KEGG: ajs:Ajs_0433 two component LuxR family transcriptional regulator; two component transcriptional regulator, LuxR family 433506..434177 Acidovorax ebreus TPSY 7384011 YP_002551909.1 CDS Dtpsy_0425 NC_011992.1 434323 435630 D PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_0434 major facilitator superfamily transporter; major facilitator superfamily MFS_1 434323..435630 Acidovorax ebreus TPSY 7384012 YP_002551910.1 CDS Dtpsy_0426 NC_011992.1 435650 437095 D TIGRFAM: nitrite transporter; PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_0435 nitrite transporter; nitrite transporter 435650..437095 Acidovorax ebreus TPSY 7384013 YP_002551911.1 CDS Dtpsy_0427 NC_011992.1 437132 440920 D TIGRFAM: nitrate reductase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: ajs:Ajs_0436 respiratory nitrate reductase alpha subunit apoprotein; nitrate reductase, alpha subunit 437132..440920 Acidovorax ebreus TPSY 7384014 YP_002551912.1 CDS Dtpsy_0428 NC_011992.1 440939 442462 D TIGRFAM: nitrate reductase, beta subunit; KEGG: ajs:Ajs_0437 respiratory nitrate reductase beta subunit; nitrate reductase, beta subunit 440939..442462 Acidovorax ebreus TPSY 7384015 YP_002551913.1 CDS Dtpsy_0429 NC_011992.1 442482 443180 D TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; PFAM: Nitrate reductase delta subunit; KEGG: ajs:Ajs_0438 respiratory nitrate reductase chaperone NarJ; nitrate reductase molybdenum cofactor assembly chaperone 442482..443180 Acidovorax ebreus TPSY 7384016 YP_002551914.1 CDS Dtpsy_0430 NC_011992.1 443177 443911 D KEGG: ajs:Ajs_0439 respiratory nitrate reductase gamma subunit; TIGRFAM: respiratory nitrate reductase, gamma subunit; PFAM: Nitrate reductase gamma subunit; respiratory nitrate reductase, gamma subunit 443177..443911 Acidovorax ebreus TPSY 7384017 YP_002551915.1 CDS Dtpsy_0431 NC_011992.1 444003 444839 D PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: ajs:Ajs_0440 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 444003..444839 Acidovorax ebreus TPSY 7384018 YP_002551916.1 CDS Dtpsy_0432 NC_011992.1 444861 445538 D PFAM: carbonic anhydrase; KEGG: ajs:Ajs_0441 carbonate dehydratase; Carbonate dehydratase 444861..445538 Acidovorax ebreus TPSY 7384019 YP_002551917.1 CDS Dtpsy_0433 NC_011992.1 445575 446909 D PFAM: NnrS family protein; KEGG: ajs:Ajs_0442 NnrS family protein; NnrS family protein 445575..446909 Acidovorax ebreus TPSY 7384020 YP_002551918.1 CDS Dtpsy_0434 NC_011992.1 446933 447577 D PFAM: nitroreductase; KEGG: ajs:Ajs_0443 nitroreductase; nitroreductase 446933..447577 Acidovorax ebreus TPSY 7384021 YP_002551919.1 CDS Dtpsy_0435 NC_011992.1 447578 448003 D KEGG: ajs:Ajs_0444 hypothetical protein; hypothetical protein 447578..448003 Acidovorax ebreus TPSY 7384022 YP_002551920.1 CDS Dtpsy_0436 NC_011992.1 448008 448553 D PFAM: Hemerythrin HHE cation binding domain protein; KEGG: ajs:Ajs_0445 hemerythrin HHE cation binding domain-containing protein; Hemerythrin HHE cation binding domain protein 448008..448553 Acidovorax ebreus TPSY 7384023 YP_002551921.1 CDS Dtpsy_0437 NC_011992.1 448774 449064 R KEGG: ajs:Ajs_0446 hypothetical protein; hypothetical protein complement(448774..449064) Acidovorax ebreus TPSY 7384024 YP_002551922.1 CDS Dtpsy_0438 NC_011992.1 449240 450454 R KEGG: ajs:Ajs_0447 hypothetical protein; hypothetical protein complement(449240..450454) Acidovorax ebreus TPSY 7384025 YP_002551923.1 CDS Dtpsy_0439 NC_011992.1 450459 451247 R PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: ajs:Ajs_0448 IclR family transcriptional regulator; transcriptional regulator, IclR family complement(450459..451247) Acidovorax ebreus TPSY 7384026 YP_002551924.1 CDS Dtpsy_0440 NC_011992.1 451363 452346 D PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: ajs:Ajs_0449 fumarylacetoacetate (FAA) hydrolase; fumarylacetoacetate (FAA) hydrolase 451363..452346 Acidovorax ebreus TPSY 7384027 YP_002551925.1 CDS Dtpsy_0441 NC_011992.1 452423 453391 D PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0450 hypothetical protein; hypothetical protein 452423..453391 Acidovorax ebreus TPSY 7384028 YP_002551926.1 CDS Dtpsy_0442 NC_011992.1 453456 455522 R PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: ajs:Ajs_0451 molybdopterin oxidoreductase; molybdopterin oxidoreductase complement(453456..455522) Acidovorax ebreus TPSY 7384029 YP_002551927.1 CDS Dtpsy_0443 NC_011992.1 455644 456792 D PFAM: Extracellular ligand-binding receptor; KEGG: ajs:Ajs_0452 extracellular ligand-binding receptor; Extracellular ligand-binding receptor 455644..456792 Acidovorax ebreus TPSY 7384030 YP_002551928.1 CDS Dtpsy_0444 NC_011992.1 456908 458113 D KEGG: ajs:Ajs_0453 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 456908..458113 Acidovorax ebreus TPSY 7384031 YP_002551929.1 CDS Dtpsy_0445 NC_011992.1 458214 459314 D KEGG: ajs:Ajs_0454 hypothetical protein; hypothetical protein 458214..459314 Acidovorax ebreus TPSY 7384032 YP_002551930.1 CDS Dtpsy_0446 NC_011992.1 459399 459656 D PFAM: acyl-coA-binding protein ACBP; KEGG: ajs:Ajs_0455 acyl-CoA-binding protein; acyl-coA-binding protein ACBP 459399..459656 Acidovorax ebreus TPSY 7384033 YP_002551931.1 CDS Dtpsy_0447 NC_011992.1 459735 460880 R KEGG: ajs:Ajs_0456 putative zinc protease protein; putative zinc protease protein complement(459735..460880) Acidovorax ebreus TPSY 7384034 YP_002551932.1 CDS Dtpsy_0448 NC_011992.1 460928 461626 D PFAM: methyladenine glycosylase; KEGG: ajs:Ajs_0457 DNA-3-methyladenine glycosylase I; DNA-3-methyladenine glycosylase I 460928..461626 Acidovorax ebreus TPSY 7384035 YP_002551933.1 CDS Dtpsy_0449 NC_011992.1 461696 462313 R KEGG: ajs:Ajs_0458 hypothetical protein; hypothetical protein complement(461696..462313) Acidovorax ebreus TPSY 7384036 YP_002551934.1 CDS Dtpsy_0450 NC_011992.1 462365 462535 R KEGG: ajs:Ajs_0459 hypothetical protein; hypothetical protein complement(462365..462535) Acidovorax ebreus TPSY 7384037 YP_002551935.1 CDS Dtpsy_0451 NC_011992.1 462825 464108 D PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: ajs:Ajs_0460 cyclopropane-fatty-acyl-phospholipid synthase; Cyclopropane-fatty-acyl-phospholipid synthase 462825..464108 Acidovorax ebreus TPSY 7384038 YP_002551936.1 CDS Dtpsy_0452 NC_011992.1 464129 464452 D PFAM: Domain of unknown function DUF1840; KEGG: ajs:Ajs_0461 hypothetical protein; hypothetical protein 464129..464452 Acidovorax ebreus TPSY 7384039 YP_002551937.1 CDS Dtpsy_0453 NC_011992.1 464490 465527 R PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0462 hypothetical protein; hypothetical protein complement(464490..465527) Acidovorax ebreus TPSY 7384040 YP_002551938.1 CDS Dtpsy_0454 NC_011992.1 465693 466682 R PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0463 hypothetical protein; hypothetical protein complement(465693..466682) Acidovorax ebreus TPSY 7384041 YP_002551939.1 CDS Dtpsy_0455 NC_011992.1 466874 468121 R KEGG: ajs:Ajs_0464 putative phenylacetate-CoA ligase; putative phenylacetate-CoA ligase complement(466874..468121) Acidovorax ebreus TPSY 7384042 YP_002551940.1 CDS Dtpsy_0456 NC_011992.1 468214 469023 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_0465 ABC transporter related; ABC transporter related complement(468214..469023) Acidovorax ebreus TPSY 7384043 YP_002551941.1 CDS Dtpsy_0457 NC_011992.1 469220 470545 R KEGG: ajs:Ajs_0466 hypothetical protein; hypothetical protein complement(469220..470545) Acidovorax ebreus TPSY 7384044 YP_002551942.1 CDS Dtpsy_0458 NC_011992.1 470622 471698 R PFAM: inner-membrane translocator; KEGG: ajs:Ajs_0467 inner-membrane translocator; inner-membrane translocator complement(470622..471698) Acidovorax ebreus TPSY 7384045 YP_002551943.1 CDS Dtpsy_0459 NC_011992.1 471817 472746 R PFAM: inner-membrane translocator; KEGG: ajs:Ajs_0468 inner-membrane translocator; inner-membrane translocator complement(471817..472746) Acidovorax ebreus TPSY 7384046 YP_002551944.1 CDS Dtpsy_0460 NC_011992.1 472757 473542 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_0469 ABC transporter related; ABC transporter related complement(472757..473542) Acidovorax ebreus TPSY 7384047 YP_002551945.1 CDS Dtpsy_0461 NC_011992.1 473565 475499 R PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_0470 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(473565..475499) Acidovorax ebreus TPSY 7384048 YP_002551946.1 CDS Dtpsy_0462 NC_011992.1 475712 477445 D PFAM: Peptidoglycan-binding domain 1 protein; SMART: AAA ATPase; KEGG: ajs:Ajs_0471 peptidoglycan binding domain-containing protein; Peptidoglycan-binding domain 1 protein 475712..477445 Acidovorax ebreus TPSY 7384049 YP_002551947.1 CDS Dtpsy_0464 NC_011992.1 478407 479225 D PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: ajs:Ajs_0473 Crp/FNR family transcriptional regulator; transcriptional regulator, Crp/Fnr family 478407..479225 Acidovorax ebreus TPSY 7384051 YP_002551948.1 CDS Dtpsy_0465 NC_011992.1 479561 480307 D PFAM: RNA-binding S4 domain protein; pseudouridine synthase; SMART: RNA-binding S4 domain protein; KEGG: ajs:Ajs_0474 RNA-binding S4 domain-containing protein; RNA-binding S4 domain protein 479561..480307 Acidovorax ebreus TPSY 7384052 YP_002551949.1 CDS Dtpsy_0466 NC_011992.1 480654 482606 D molecular chaperone; heat shock protein 90 480654..482606 Acidovorax ebreus TPSY 7384053 YP_002551950.1 CDS Dtpsy_0467 NC_011992.1 482765 483802 D PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0476 hypothetical protein; hypothetical protein 482765..483802 Acidovorax ebreus TPSY 7384054 YP_002551951.1 CDS Dtpsy_0468 NC_011992.1 483950 484462 D KEGG: ajs:Ajs_0477 hypothetical protein; hypothetical protein 483950..484462 Acidovorax ebreus TPSY 7384055 YP_002551952.1 CDS Dtpsy_0469 NC_011992.1 484488 485159 D KEGG: ajs:Ajs_0478 hypothetical protein; hypothetical protein 484488..485159 Acidovorax ebreus TPSY 7384056 YP_002551953.1 CDS Dtpsy_0470 NC_011992.1 485166 486206 R catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages; serine/threonine protein kinase complement(485166..486206) Acidovorax ebreus TPSY 7384057 YP_002551954.1 CDS Dtpsy_0471 NC_011992.1 486242 487681 R PFAM: tyrosine protein kinase; aminoglycoside phosphotransferase; UspA domain protein; Serine/threonine protein kinase-related; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: ajs:Ajs_0480 serine/threonine protein kinase; serine/threonine protein kinase complement(486242..487681) Acidovorax ebreus TPSY 7384058 YP_002551955.1 CDS Dtpsy_0472 NC_011992.1 487724 488482 R PFAM: metallophosphoesterase; KEGG: ajs:Ajs_0481 metallophosphoesterase; metallophosphoesterase complement(487724..488482) Acidovorax ebreus TPSY 7384059 YP_002551956.1 CDS Dtpsy_0473 NC_011992.1 488613 489029 R TIGRFAM: OsmC family protein; PFAM: OsmC family protein; KEGG: ajs:Ajs_0482 OsmC family protein; OsmC family protein complement(488613..489029) Acidovorax ebreus TPSY 7384060 YP_002551957.1 CDS Dtpsy_0474 NC_011992.1 489091 489558 R PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: ajs:Ajs_0483 MarR family transcriptional regulator; transcriptional regulator, MarR family complement(489091..489558) Acidovorax ebreus TPSY 7384061 YP_002551958.1 CDS Dtpsy_0475 NC_011992.1 489867 490667 R PFAM: HpcH/HpaI aldolase; KEGG: ajs:Ajs_3719 2-dehydro-3-deoxyglucarate aldolase; 2-dehydro-3-deoxyglucarate aldolase complement(489867..490667) Acidovorax ebreus TPSY 7384062 YP_002551959.1 CDS Dtpsy_0476 NC_011992.1 490688 491536 R converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; 3-hydroxybutyryl-CoA dehydrogenase complement(490688..491536) Acidovorax ebreus TPSY 7384063 YP_002551960.1 CDS Dtpsy_0477 NC_011992.1 491649 493244 D PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: ajs:Ajs_3717 glucose-methanol-choline oxidoreductase; Choline dehydrogenase 491649..493244 Acidovorax ebreus TPSY 7384064 YP_002551961.1 CDS Dtpsy_0478 NC_011992.1 493419 494138 D KEGG: ajs:Ajs_3716 hypothetical protein; hypothetical protein 493419..494138 Acidovorax ebreus TPSY 7384065 YP_002551962.1 CDS Dtpsy_0479 NC_011992.1 494135 494569 D KEGG: ajs:Ajs_3715 hypothetical protein; hypothetical protein 494135..494569 Acidovorax ebreus TPSY 7384066 YP_002551963.1 CDS Dtpsy_0480 NC_011992.1 494589 495935 R PFAM: GAF domain protein; pyridoxamine 5'-phosphate oxidase-related FMN-binding; SMART: GAF domain protein; KEGG: ajs:Ajs_3714 putative GAF sensor protein; putative phytochrome sensor protein complement(494589..495935) Acidovorax ebreus TPSY 7384067 YP_002551964.1 CDS Dtpsy_0481 NC_011992.1 495932 496423 R KEGG: pol:Bpro_0631 hypothetical protein; hypothetical protein complement(495932..496423) Acidovorax ebreus TPSY 7384068 YP_002551965.1 CDS Dtpsy_0482 NC_011992.1 496435 497244 R TIGRFAM: ABC-2 type transporter, NodJ family; PFAM: ABC-2 type transporter; KEGG: ajs:Ajs_3712 ABC transporter; ABC-2 type transporter, NodJ family complement(496435..497244) Acidovorax ebreus TPSY 7382611 YP_002551966.1 CDS Dtpsy_0484 NC_011992.1 498287 499546 D KEGG: ajs:Ajs_3710 hypothetical protein; hypothetical protein 498287..499546 Acidovorax ebreus TPSY 7382775 YP_002551967.1 CDS Dtpsy_0485 NC_011992.1 499619 501100 R Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile; AMP nucleosidase complement(499619..501100) Acidovorax ebreus TPSY 7382776 YP_002551968.1 CDS Dtpsy_0486 NC_011992.1 501178 503268 R KEGG: ajs:Ajs_3708 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; GGDEF domain containing protein; EAL domain protein; diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) complement(501178..503268) Acidovorax ebreus TPSY 7382777 YP_002551969.1 CDS Dtpsy_0487 NC_011992.1 503400 504359 D TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: ajs:Ajs_3707 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter 503400..504359 Acidovorax ebreus TPSY 7382778 YP_002551970.1 CDS Dtpsy_0488 NC_011992.1 504356 504817 D hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase 504356..504817 Acidovorax ebreus TPSY 7382779 YP_002551971.1 CDS Dtpsy_0489 NC_011992.1 504827 506236 D PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: helicase domain protein; DEAD-like helicases; KEGG: ajs:Ajs_3705 DEAD/DEAH box helicase domain-containing protein; DEAD/DEAH box helicase domain protein 504827..506236 Acidovorax ebreus TPSY 7382780 YP_002551972.1 CDS Dtpsy_0490 NC_011992.1 506264 507040 R PFAM: protein of unknown function DUF81; KEGG: ajs:Ajs_3704 hypothetical protein; protein of unknown function DUF81 complement(506264..507040) Acidovorax ebreus TPSY 7382781 YP_002551973.1 CDS Dtpsy_0491 NC_011992.1 507216 507674 R PFAM: protein of unknown function UPF0054; KEGG: ajs:Ajs_3702 hypothetical protein; protein of unknown function UPF0054 complement(507216..507674) Acidovorax ebreus TPSY 7382782 YP_002551974.1 CDS Dtpsy_0492 NC_011992.1 507740 508747 R PFAM: PhoH family protein; KEGG: ajs:Ajs_3701 PhoH family protein; PhoH family protein complement(507740..508747) Acidovorax ebreus TPSY 7382783 YP_002551975.1 CDS ruvA NC_011992.1 508750 509322 D plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 508750..509322 Acidovorax ebreus TPSY 7382784 YP_002551976.1 CDS Dtpsy_0494 NC_011992.1 509345 510811 D KEGG: ajs:Ajs_3699 endoproteinase Arg-C; endoproteinase Arg-C 509345..510811 Acidovorax ebreus TPSY 7382785 YP_002551977.1 CDS Dtpsy_0495 NC_011992.1 510808 513663 R KEGG: ajs:Ajs_3698 DnaK-related protein; DnaK-related protein complement(510808..513663) Acidovorax ebreus TPSY 7382786 YP_002551978.1 CDS Dtpsy_0497 NC_011992.1 514270 516180 R KEGG: ajs:Ajs_3696 putative heat-shock chaperone protein; putative heat-shock chaperone protein complement(514270..516180) Acidovorax ebreus TPSY 7382788 YP_002551979.1 CDS Dtpsy_0498 NC_011992.1 516189 516827 R KEGG: ajs:Ajs_3695 hypothetical protein; hypothetical protein complement(516189..516827) Acidovorax ebreus TPSY 7382789 YP_002551980.1 CDS ruvB NC_011992.1 517051 518121 D promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 517051..518121 Acidovorax ebreus TPSY 7382790 YP_002551981.1 CDS Dtpsy_0500 NC_011992.1 518126 519919 R PFAM: fatty acid hydroxylase; YhhN family protein; KEGG: ajs:Ajs_3693 YhhN family protein; YhhN family protein complement(518126..519919) Acidovorax ebreus TPSY 7382791 YP_002551982.1 CDS Dtpsy_0501 NC_011992.1 520100 521281 R PFAM: alanine racemase domain protein; KEGG: ajs:Ajs_0490 alanine racemase domain-containing protein; alanine racemase domain protein complement(520100..521281) Acidovorax ebreus TPSY 7382792 YP_002551983.1 CDS Dtpsy_0502 NC_011992.1 521265 521909 R PFAM: Phosphoglycerate mutase; KEGG: ajs:Ajs_0491 phosphoglycerate mutase; Phosphoglycerate mutase complement(521265..521909) Acidovorax ebreus TPSY 7382793 YP_002551984.1 CDS Dtpsy_0503 NC_011992.1 521932 522396 R KEGG: ajs:Ajs_0492 hypothetical protein; hypothetical protein complement(521932..522396) Acidovorax ebreus TPSY 7382794 YP_002551985.1 CDS Dtpsy_0504 NC_011992.1 522424 523038 R KEGG: ajs:Ajs_0493 hypothetical protein; hypothetical protein complement(522424..523038) Acidovorax ebreus TPSY 7382795 YP_002551986.1 CDS Dtpsy_0505 NC_011992.1 523104 524057 R PFAM: PP-loop domain protein; KEGG: ajs:Ajs_0494 PP-loop domain-containing protein; PP-loop domain protein complement(523104..524057) Acidovorax ebreus TPSY 7382796 YP_002551987.1 CDS Dtpsy_0506 NC_011992.1 524062 524454 R PFAM: dihydroneopterin aldolase; KEGG: ajs:Ajs_0495 dihydroneopterin aldolase; dihydroneopterin aldolase complement(524062..524454) Acidovorax ebreus TPSY 7382797 YP_002551988.1 CDS Dtpsy_0507 NC_011992.1 524459 524872 R PFAM: dihydroneopterin aldolase; KEGG: eugene3.214320002.; dihydroneopterin aldolase complement(524459..524872) Acidovorax ebreus TPSY 7382798 YP_002551989.1 CDS Dtpsy_0509 NC_011992.1 525661 526443 R hypothetical protein complement(525661..526443) Acidovorax ebreus TPSY 7382800 YP_002551990.1 CDS Dtpsy_0510 NC_011992.1 526479 527567 D PFAM: protein of unknown function DUF185; KEGG: ajs:Ajs_0497 hypothetical protein; protein of unknown function DUF185 526479..527567 Acidovorax ebreus TPSY 7382801 YP_002551991.1 CDS Dtpsy_0511 NC_011992.1 527683 528582 D PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: xcv:XCV0883 taurine dioxygenase; Taurine dioxygenase 527683..528582 Acidovorax ebreus TPSY 7382802 YP_002551992.1 CDS Dtpsy_0512 NC_011992.1 528678 529778 D KEGG: bph:Bphy_3603 nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein; nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein 528678..529778 Acidovorax ebreus TPSY 7382803 YP_002551993.1 CDS Dtpsy_0513 NC_011992.1 529778 530719 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cti:RALTA_B1991 putative taurine transporter, ABC superfamily, atp_binding component; ABC transporter related 529778..530719 Acidovorax ebreus TPSY 7382804 YP_002551994.1 CDS Dtpsy_0514 NC_011992.1 530729 531631 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mms:mma_2483 ABC-type sulfonate/nitrate transport system permease protein; binding-protein-dependent transport systems inner membrane component 530729..531631 Acidovorax ebreus TPSY 7382805 YP_002551995.1 CDS Dtpsy_0515 NC_011992.1 531928 532122 D KEGG: ajs:Ajs_0499 hypothetical protein; hypothetical protein 531928..532122 Acidovorax ebreus TPSY 7382806 YP_002551996.1 CDS Dtpsy_0516 NC_011992.1 532219 533229 D PFAM: ROK family protein; KEGG: ajs:Ajs_0500 glucokinase; ROK family protein 532219..533229 Acidovorax ebreus TPSY 7382807 YP_002551997.1 CDS Dtpsy_0517 NC_011992.1 533306 534724 R KEGG: ajs:Ajs_0501 alpha,alpha-trehalose-phosphate synthase (UDP-forming); TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]; PFAM: glycosyl transferase family 20; alpha,alpha-trehalose-phosphate synthase (UDP-forming) complement(533306..534724) Acidovorax ebreus TPSY 7382808 YP_002551998.1 CDS Dtpsy_0518 NC_011992.1 534741 536561 R PFAM: glycoside hydrolase 15-related; KEGG: ajs:Ajs_0502 glycoside hydrolase 15-related; glycoside hydrolase 15-related complement(534741..536561) Acidovorax ebreus TPSY 7382809 YP_002551999.1 CDS Dtpsy_0519 NC_011992.1 536558 537289 R KEGG: ajs:Ajs_0503 HAD family hydrolase; TIGRFAM: trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB; PFAM: trehalose-phosphatase; trehalose-phosphatase complement(536558..537289) Acidovorax ebreus TPSY 7382810 YP_002552000.1 CDS Dtpsy_0520 NC_011992.1 537416 537853 D TIGRFAM: thioredoxin; MJ0042 family finger-like protein; PFAM: Thioredoxin domain; KEGG: ajs:Ajs_0504 thioredoxin; thioredoxin 537416..537853 Acidovorax ebreus TPSY 7382811 YP_002552001.1 CDS Dtpsy_0521 NC_011992.1 537985 539262 R PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; KEGG: ajs:Ajs_0505 metal dependent phosphohydrolase; polynucleotide adenylyltransferase/metal dependent phosphohydrolase complement(537985..539262) Acidovorax ebreus TPSY 7382812 YP_002552002.1 CDS Dtpsy_0522 NC_011992.1 539568 540335 R PFAM: metallophosphoesterase; KEGG: ajs:Ajs_0506 metallophosphoesterase; metallophosphoesterase complement(539568..540335) Acidovorax ebreus TPSY 7382813 YP_002552003.1 CDS Dtpsy_0523 NC_011992.1 540353 541039 R PFAM: Glutathione S-transferase domain; KEGG: ajs:Ajs_0507 glutathione S-transferase domain-containing protein; Glutathione S-transferase domain protein complement(540353..541039) Acidovorax ebreus TPSY 7382814 YP_002552004.1 CDS Dtpsy_0524 NC_011992.1 541169 541741 R TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: ajs:Ajs_0508 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase complement(541169..541741) Acidovorax ebreus TPSY 7382815 YP_002552005.1 CDS Dtpsy_0525 NC_011992.1 541765 543738 D PFAM: Lytic transglycosylase catalytic; KEGG: ajs:Ajs_0509 lytic transglycosylase, catalytic; Lytic transglycosylase catalytic 541765..543738 Acidovorax ebreus TPSY 7382816 YP_002552006.1 CDS Dtpsy_0526 NC_011992.1 543814 544386 R PFAM: cytochrome B561; KEGG: ajs:Ajs_0510 cytochrome b561; cytochrome B561 complement(543814..544386) Acidovorax ebreus TPSY 7382817 YP_002552007.1 CDS Dtpsy_0527 NC_011992.1 544367 544636 R KEGG: ajs:Ajs_0511 putative signal peptide protein; putative signal peptide protein complement(544367..544636) Acidovorax ebreus TPSY 7382818 YP_002552008.1 CDS Dtpsy_0528 NC_011992.1 544695 545378 R PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; KEGG: ajs:Ajs_0512 putative hydroxylase; putative hydroxylase complement(544695..545378) Acidovorax ebreus TPSY 7382819 YP_002552009.1 CDS Dtpsy_0529 NC_011992.1 545372 546499 R PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: ajs:Ajs_0513 (S)-2-hydroxy-acid oxidase; (S)-2-hydroxy-acid oxidase complement(545372..546499) Acidovorax ebreus TPSY 7382820 YP_002552010.1 CDS Dtpsy_0530 NC_011992.1 546522 548825 R PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ajs:Ajs_0514 TonB-dependent receptor; TonB-dependent receptor complement(546522..548825) Acidovorax ebreus TPSY 7382821 YP_002552011.1 CDS Dtpsy_0531 NC_011992.1 549066 549992 R PFAM: beta-lactamase domain protein; KEGG: ajs:Ajs_0515 beta-lactamase domain-containing protein; beta-lactamase domain protein complement(549066..549992) Acidovorax ebreus TPSY 7382822 YP_002552012.1 CDS Dtpsy_0532 NC_011992.1 550027 551712 R PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_0516 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(550027..551712) Acidovorax ebreus TPSY 7382823 YP_002552013.1 CDS Dtpsy_0533 NC_011992.1 551853 552764 D PFAM: PGAP1 family protein; KEGG: ajs:Ajs_0517 PGAP1 family protein; PGAP1 family protein 551853..552764 Acidovorax ebreus TPSY 7382824 YP_002552014.1 CDS phhA NC_011992.1 552783 553622 R phenylalanine 4-hydroxylase; phenylalanine 4-hydroxylase; catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin; phenylalanine 4-monooxygenase complement(552783..553622) Acidovorax ebreus TPSY 7382825 YP_002552015.1 CDS Dtpsy_0535 NC_011992.1 553708 554637 R PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0519 hypothetical protein; hypothetical protein complement(553708..554637) Acidovorax ebreus TPSY 7382826 YP_002552016.1 CDS Dtpsy_0536 NC_011992.1 554766 555884 R KEGG: ajs:Ajs_0520 4-hydroxyphenylpyruvate dioxygenase; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 4-hydroxyphenylpyruvate dioxygenase complement(554766..555884) Acidovorax ebreus TPSY 7382827 YP_002552017.1 CDS Dtpsy_0537 NC_011992.1 556070 556555 D PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: ajs:Ajs_0521 AsnC family transcriptional regulator; transcriptional regulator, AsnC family 556070..556555 Acidovorax ebreus TPSY 7382828 YP_002552018.1 CDS Dtpsy_0538 NC_011992.1 556832 557464 D PFAM: GCN5-related N-acetyltransferase; KEGG: ajs:Ajs_0522 GCN5-related N-acetyltransferase; GCN5-related N-acetyltransferase 556832..557464 Acidovorax ebreus TPSY 7382829 YP_002552019.1 CDS Dtpsy_0539 NC_011992.1 557547 558425 D PFAM: CBS domain containing protein; transporter-associated region; KEGG: ajs:Ajs_0523 CBS domain-containing protein; CBS domain containing protein 557547..558425 Acidovorax ebreus TPSY 7382830 YP_002552020.1 CDS lnt NC_011992.1 558425 560023 D Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase 558425..560023 Acidovorax ebreus TPSY 7382831 YP_002552021.1 CDS Dtpsy_0541 NC_011992.1 560207 560731 D catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; 3-hydroxydecanoyl-(acyl carrier protein) dehydratase 560207..560731 Acidovorax ebreus TPSY 7382832 YP_002552022.1 CDS Dtpsy_0542 NC_011992.1 560728 561951 D PFAM: Beta-ketoacyl synthase; KEGG: ajs:Ajs_0526 beta-ketoacyl synthase; Beta-ketoacyl synthase 560728..561951 Acidovorax ebreus TPSY 7382833 YP_002552023.1 CDS glyQ NC_011992.1 562058 563011 D glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 562058..563011 Acidovorax ebreus TPSY 7382834 YP_002552024.1 CDS Dtpsy_0544 NC_011992.1 563042 565204 D KEGG: ajs:Ajs_0528 glycine--tRNA ligase; TIGRFAM: glycyl-tRNA synthetase, beta subunit; glycyl-tRNA synthetase, beta subunit 563042..565204 Acidovorax ebreus TPSY 7382835 YP_002552025.1 CDS Dtpsy_0545 NC_011992.1 565289 565864 D TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: ajs:Ajs_0529 D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase; histidinol-phosphate phosphatase family protein 565289..565864 Acidovorax ebreus TPSY 7382836 YP_002552026.1 CDS Dtpsy_0546 NC_011992.1 565942 566691 D PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: ajs:Ajs_0530 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 565942..566691 Acidovorax ebreus TPSY 7382837 YP_002552027.1 CDS Dtpsy_0547 NC_011992.1 566693 567613 D PFAM: protein of unknown function DUF45; KEGG: ajs:Ajs_0531 hypothetical protein; protein of unknown function DUF45 566693..567613 Acidovorax ebreus TPSY 7382838 YP_002552028.1 CDS Dtpsy_0548 NC_011992.1 567643 568092 D SMART: Rhodanese domain protein; KEGG: ajs:Ajs_0532 rhodanese domain-containing protein; Rhodanese domain protein 567643..568092 Acidovorax ebreus TPSY 7382839 YP_002552029.1 CDS Dtpsy_0549 NC_011992.1 568189 568677 R PFAM: Peptidoglycan-binding LysM; transport-associated; SMART: Peptidoglycan-binding LysM; KEGG: ajs:Ajs_0533 peptidoglycan-binding LysM; Peptidoglycan-binding LysM complement(568189..568677) Acidovorax ebreus TPSY 7382840 YP_002552030.1 CDS Dtpsy_0550 NC_011992.1 568834 569610 D type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase 568834..569610 Acidovorax ebreus TPSY 7382841 YP_002552031.1 CDS Dtpsy_0551 NC_011992.1 569632 570294 R PFAM: regulatory protein TetR; KEGG: ajs:Ajs_0535 TetR family transcriptional regulator; transcriptional regulator, TetR family complement(569632..570294) Acidovorax ebreus TPSY 7382842 YP_002552032.1 CDS Dtpsy_0552 NC_011992.1 570387 570860 R TIGRFAM: poly(hydroxyalkanoate) granule-associated protein; PFAM: poly granule associated family protein; KEGG: ajs:Ajs_0536 poly(hydroxyalkanoate) granule-associated protein; poly(hydroxyalkanoate) granule-associated protein complement(570387..570860) Acidovorax ebreus TPSY 7382843 YP_002552033.1 CDS Dtpsy_0553 NC_011992.1 571044 572111 D TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: ajs:Ajs_0537 dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase 571044..572111 Acidovorax ebreus TPSY 7382844 YP_002552034.1 CDS Dtpsy_0554 NC_011992.1 572108 572998 D KEGG: ajs:Ajs_0538 dTDP-4-dehydrorhamnose reductase; TIGRFAM: dTDP-4-dehydrorhamnose reductase; PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; dTDP-4-dehydrorhamnose reductase 572108..572998 Acidovorax ebreus TPSY 7382845 YP_002552035.1 CDS Dtpsy_0555 NC_011992.1 573019 573909 D TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: ajs:Ajs_0539 glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylyltransferase 573019..573909 Acidovorax ebreus TPSY 7382846 YP_002552036.1 CDS Dtpsy_0556 NC_011992.1 573909 574454 D KEGG: ajs:Ajs_0540 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase 573909..574454 Acidovorax ebreus TPSY 7382847 YP_002552037.1 CDS Dtpsy_0557 NC_011992.1 574468 575601 D PFAM: glycosyl transferase group 1; KEGG: pol:Bpro_4016 glycosyl transferase, group 1; glycosyl transferase group 1 574468..575601 Acidovorax ebreus TPSY 7382848 YP_002552038.1 CDS Dtpsy_0558 NC_011992.1 575574 576719 R PFAM: glycosyl transferase group 1; KEGG: pol:Bpro_4015 glycosyl transferase, group 1; glycosyl transferase group 1 complement(575574..576719) Acidovorax ebreus TPSY 7382849 YP_002552039.1 CDS Dtpsy_0559 NC_011992.1 576716 577543 R PFAM: Aldose 1-epimerase; KEGG: pol:Bpro_4014 aldose 1-epimerase; Aldose 1-epimerase complement(576716..577543) Acidovorax ebreus TPSY 7382850 YP_002552040.1 CDS Dtpsy_0560 NC_011992.1 577556 578422 R PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: pol:Bpro_4013 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(577556..578422) Acidovorax ebreus TPSY 7382851 YP_002552041.1 CDS Dtpsy_0561 NC_011992.1 578419 579459 R TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: pol:Bpro_4012 GDP-mannose 4,6-dehydratase; GDP-mannose 4,6-dehydratase complement(578419..579459) Acidovorax ebreus TPSY 7382852 YP_002552042.1 CDS Dtpsy_0562 NC_011992.1 579679 581529 R PFAM: glycosyl transferase family 2; glycosyl transferase group 1; KEGG: cau:Caur_1741 glycosyl transferase family protein; glycosyl transferase family 2 complement(579679..581529) Acidovorax ebreus TPSY 7382853 YP_002552043.1 CDS Dtpsy_0563 NC_011992.1 581519 582709 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bac:BamMC406_0768 methyltransferase type 11; Methyltransferase type 11 complement(581519..582709) Acidovorax ebreus TPSY 7382854 YP_002552044.1 CDS Dtpsy_0564 NC_011992.1 582833 584053 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bac:BamMC406_0767 ABC transporter related; ABC transporter related complement(582833..584053) Acidovorax ebreus TPSY 7385081 YP_002552045.1 CDS Dtpsy_0565 NC_011992.1 584053 584844 R PFAM: ABC-2 type transporter; KEGG: mfa:Mfla_1269 hypothetical protein; ABC-2 type transporter complement(584053..584844) Acidovorax ebreus TPSY 7382939 YP_002552046.1 CDS Dtpsy_0566 NC_011992.1 584844 586274 R KEGG: pol:Bpro_3999 mannose-1-phosphate guanylyltransferase (GDP); TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase complement(584844..586274) Acidovorax ebreus TPSY 7382940 YP_002552047.1 CDS Dtpsy_0567 NC_011992.1 586445 587539 D PFAM: glycosyl transferase family 4; KEGG: pol:Bpro_3998 glycosyl transferase, family 4; glycosyl transferase family 4 586445..587539 Acidovorax ebreus TPSY 7382941 YP_002552048.1 CDS Dtpsy_0568 NC_011992.1 587586 588491 D catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 587586..588491 Acidovorax ebreus TPSY 7382942 YP_002552049.1 CDS slmA NC_011992.1 588686 589330 D FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly; nucleoid occlusion protein 588686..589330 Acidovorax ebreus TPSY 7382943 YP_002552050.1 CDS Dtpsy_0570 NC_011992.1 589537 590202 D PFAM: regulatory protein TetR; KEGG: ajs:Ajs_0591 TetR family transcriptional regulator; transcriptional regulator, TetR family 589537..590202 Acidovorax ebreus TPSY 7382944 YP_002552051.1 CDS Dtpsy_0571 NC_011992.1 590267 592063 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_0592 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase domain protein 590267..592063 Acidovorax ebreus TPSY 7382945 YP_002552052.1 CDS Dtpsy_0572 NC_011992.1 592116 592550 D KEGG: ajs:Ajs_0593 hypothetical protein; hypothetical protein 592116..592550 Acidovorax ebreus TPSY 7382946 YP_002552053.1 CDS Dtpsy_0573 NC_011992.1 592651 595053 D PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: ajs:Ajs_0594 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxyacyl-CoA dehydrogenase NAD-binding 592651..595053 Acidovorax ebreus TPSY 7382947 YP_002552054.1 CDS Dtpsy_0574 NC_011992.1 595075 596271 D Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 595075..596271 Acidovorax ebreus TPSY 7382948 YP_002552055.1 CDS Dtpsy_0575 NC_011992.1 596352 597248 D KEGG: ajs:Ajs_0596 putative hydrolase; putative hydrolase 596352..597248 Acidovorax ebreus TPSY 7382949 YP_002552056.1 CDS Dtpsy_0576 NC_011992.1 597274 598116 D KEGG: ajs:Ajs_0597 hypothetical protein; hypothetical protein 597274..598116 Acidovorax ebreus TPSY 7382950 YP_002552057.1 CDS Dtpsy_0577 NC_011992.1 598133 598909 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 598133..598909 Acidovorax ebreus TPSY 7382951 YP_002552058.1 CDS Dtpsy_0578 NC_011992.1 599089 599571 D PFAM: thioesterase superfamily protein; KEGG: ajs:Ajs_0599 hypothetical protein; hypothetical protein 599089..599571 Acidovorax ebreus TPSY 7382952 YP_002552059.1 CDS Dtpsy_0579 NC_011992.1 599758 600312 D PFAM: protein of unknown function DUF583; KEGG: ajs:Ajs_0600 hypothetical protein; protein of unknown function DUF583 599758..600312 Acidovorax ebreus TPSY 7382953 YP_002552060.1 CDS Dtpsy_0580 NC_011992.1 600366 600839 R PFAM: thioesterase superfamily protein; KEGG: ajs:Ajs_0601 thioesterase superfamily protein; thioesterase superfamily protein complement(600366..600839) Acidovorax ebreus TPSY 7382954 YP_002552061.1 CDS Dtpsy_0581 NC_011992.1 600841 602652 D PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_0602 ABC transporter related; ABC transporter related 600841..602652 Acidovorax ebreus TPSY 7382955 YP_002552062.1 CDS Dtpsy_0582 NC_011992.1 602707 603021 D PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: ajs:Ajs_0603 MazG nucleotide pyrophosphohydrolase; MazG nucleotide pyrophosphohydrolase 602707..603021 Acidovorax ebreus TPSY 7382956 YP_002552063.1 CDS Dtpsy_0583 NC_011992.1 603135 604166 R TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: ajs:Ajs_0604 TRAP dicarboxylate transporter, DctP subunit; TRAP dicarboxylate transporter, DctP subunit complement(603135..604166) Acidovorax ebreus TPSY 7382957 YP_002552064.1 CDS Dtpsy_0584 NC_011992.1 604200 605498 R TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: ajs:Ajs_0605 TRAP dicarboxylate transporter, DctM subunit; TRAP dicarboxylate transporter, DctM subunit complement(604200..605498) Acidovorax ebreus TPSY 7382958 YP_002552065.1 CDS Dtpsy_0585 NC_011992.1 605495 606085 R PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: ajs:Ajs_0606 tripartite ATP-independent periplasmic transporter DctQ; Tripartite ATP-independent periplasmic transporter DctQ component complement(605495..606085) Acidovorax ebreus TPSY 7382959 YP_002552066.1 CDS Dtpsy_0586 NC_011992.1 606304 607251 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_0607 LysR family transcriptional regulator; transcriptional regulator, LysR family 606304..607251 Acidovorax ebreus TPSY 7382960 YP_002552067.1 CDS Dtpsy_0587 NC_011992.1 607433 608323 D PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: ajs:Ajs_0608 extracellular solute-binding protein; extracellular solute-binding protein family 3 607433..608323 Acidovorax ebreus TPSY 7382961 YP_002552068.1 CDS Dtpsy_0588 NC_011992.1 608446 609345 D PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: ajs:Ajs_0609 extracellular solute-binding protein; extracellular solute-binding protein family 3 608446..609345 Acidovorax ebreus TPSY 7382962 YP_002552069.1 CDS Dtpsy_0589 NC_011992.1 609466 610218 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_0610 polar amino acid ABC transporter, inner membrane subunit; polar amino acid ABC transporter, inner membrane subunit 609466..610218 Acidovorax ebreus TPSY 7382963 YP_002552070.1 CDS Dtpsy_0590 NC_011992.1 610220 610891 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_0611 polar amino acid ABC transporter, inner membrane subunit; polar amino acid ABC transporter, inner membrane subunit 610220..610891 Acidovorax ebreus TPSY 7382964 YP_002552071.1 CDS Dtpsy_0591 NC_011992.1 610914 611651 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_0612 ABC transporter related; ABC transporter related 610914..611651 Acidovorax ebreus TPSY 7382965 YP_002552072.1 CDS Dtpsy_0592 NC_011992.1 611943 612995 R catalyzes the formation of L-proline from L-ornithine; ornithine cyclodeaminase complement(611943..612995) Acidovorax ebreus TPSY 7382966 YP_002552073.1 CDS Dtpsy_0593 NC_011992.1 613108 613539 D PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: ajs:Ajs_0614 AsnC family transcriptional regulator; transcriptional regulator, AsnC family 613108..613539 Acidovorax ebreus TPSY 7382967 YP_002552074.1 CDS Dtpsy_0594 NC_011992.1 613565 614221 R PFAM: cytochrome c class I; KEGG: ajs:Ajs_0615 cytochrome c, class I; cytochrome c class I complement(613565..614221) Acidovorax ebreus TPSY 7382968 YP_002552075.1 CDS Dtpsy_0595 NC_011992.1 614318 615154 R TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; KEGG: ajs:Ajs_0616 HAD family hydrolase; HAD-superfamily hydrolase, subfamily IIB complement(614318..615154) Acidovorax ebreus TPSY 7382969 YP_002552076.1 CDS prfC NC_011992.1 615172 616797 R stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3 complement(615172..616797) Acidovorax ebreus TPSY 7382970 YP_002552077.1 CDS Dtpsy_0597 NC_011992.1 617084 618514 D catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase 617084..618514 Acidovorax ebreus TPSY 7382971 YP_002552078.1 CDS Dtpsy_0598 NC_011992.1 618627 619625 D PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: ajs:Ajs_0619 ribosomal RNA methyltransferase RrmJ/FtsJ; ribosomal RNA methyltransferase RrmJ/FtsJ 618627..619625 Acidovorax ebreus TPSY 7382972 YP_002552079.1 CDS Dtpsy_0599 NC_011992.1 619622 620461 D KEGG: ajs:Ajs_0620 5,10-methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase 619622..620461 Acidovorax ebreus TPSY 7382973 YP_002552080.1 CDS Dtpsy_0600 NC_011992.1 620472 621155 D KEGG: ajs:Ajs_0621 hypothetical protein; hypothetical protein 620472..621155 Acidovorax ebreus TPSY 7382974 YP_002552081.1 CDS Dtpsy_0601 NC_011992.1 621175 621891 D TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: ajs:Ajs_0622 rare lipoprotein A; rare lipoprotein A 621175..621891 Acidovorax ebreus TPSY 7382975 YP_002552082.1 CDS Dtpsy_0602 NC_011992.1 621936 622826 R PFAM: protein of unknown function DUF519; KEGG: ajs:Ajs_0623 hypothetical protein; protein of unknown function DUF519 complement(621936..622826) Acidovorax ebreus TPSY 7382976 YP_002552083.1 CDS Dtpsy_0603 NC_011992.1 623042 624928 D PFAM: tyrosine protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: ajs:Ajs_0624 protein kinase; serine/threonine protein kinase 623042..624928 Acidovorax ebreus TPSY 7382977 YP_002552084.1 CDS rplM NC_011992.1 625083 625511 D in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 625083..625511 Acidovorax ebreus TPSY 7382978 YP_002552085.1 CDS rpsI NC_011992.1 625522 625914 D forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 625522..625914 Acidovorax ebreus TPSY 7382979 YP_002552086.1 CDS Dtpsy_0606 NC_011992.1 626055 626771 D KEGG: aav:Aave_4051 hypothetical protein; hypothetical protein 626055..626771 Acidovorax ebreus TPSY 7382980 YP_002552087.1 CDS Dtpsy_0607 NC_011992.1 626826 627224 D PFAM: protein of unknown function DUF583; KEGG: ajs:Ajs_0628 hypothetical protein; protein of unknown function DUF583 626826..627224 Acidovorax ebreus TPSY 7382981 YP_002552088.1 CDS Dtpsy_0608 NC_011992.1 627285 627659 D essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors; iron-sulfur cluster insertion protein ErpA 627285..627659 Acidovorax ebreus TPSY 7382982 YP_002552089.1 CDS anmK NC_011992.1 627722 628843 R catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase complement(627722..628843) Acidovorax ebreus TPSY 7382983 YP_002552090.1 CDS Dtpsy_0610 NC_011992.1 628856 630220 R PFAM: Peptidase M23; KEGG: ajs:Ajs_0631 peptidase M23B; Peptidase M23 complement(628856..630220) Acidovorax ebreus TPSY 7382984 YP_002552091.1 CDS Dtpsy_0611 NC_011992.1 630414 631646 D catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 630414..631646 Acidovorax ebreus TPSY 7382985 YP_002552092.1 CDS Dtpsy_0612 NC_011992.1 631717 632145 R TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: ajs:Ajs_0633 hemerythrin-like metal-binding protein; hemerythrin-like metal-binding protein complement(631717..632145) Acidovorax ebreus TPSY 7382986 YP_002552093.1 CDS Dtpsy_0613 NC_011992.1 632397 633407 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_0634 LysR family transcriptional regulator; transcriptional regulator, LysR family complement(632397..633407) Acidovorax ebreus TPSY 7382987 YP_002552094.1 CDS Dtpsy_0614 NC_011992.1 633637 633999 D KEGG: ajs:Ajs_0635 hypothetical protein; hypothetical protein 633637..633999 Acidovorax ebreus TPSY 7382988 YP_002552095.1 CDS Dtpsy_0615 NC_011992.1 634191 635621 D TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: ajs:Ajs_0636 glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase; UDP-N-acetylglucosamine pyrophosphorylase 634191..635621 Acidovorax ebreus TPSY 7382989 YP_002552096.1 CDS Dtpsy_0616 NC_011992.1 635626 636396 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ajs:Ajs_0637 histidine kinase; histidine kinase 635626..636396 Acidovorax ebreus TPSY 7382990 YP_002552097.1 CDS Dtpsy_0617 NC_011992.1 636428 636769 R KEGG: ajs:Ajs_0638 MerR family transcriptional regulator; MerR family transcriptional regulator complement(636428..636769) Acidovorax ebreus TPSY 7382991 YP_002552098.1 CDS Dtpsy_0618 NC_011992.1 636772 637767 R PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; KEGG: ajs:Ajs_0639 heat shock protein DnaJ domain-containing protein; heat shock protein DnaJ domain protein complement(636772..637767) Acidovorax ebreus TPSY 7382992 YP_002552099.1 CDS Dtpsy_0619 NC_011992.1 637893 638384 R PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: ajs:Ajs_0640 AsnC family transcriptional regulator; transcriptional regulator, AsnC family complement(637893..638384) Acidovorax ebreus TPSY 7382993 YP_002552100.1 CDS Dtpsy_0620 NC_011992.1 638521 640431 D Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 638521..640431 Acidovorax ebreus TPSY 7382994 YP_002552101.1 CDS Dtpsy_0621 NC_011992.1 640597 641232 R PFAM: NAD-dependent epimerase/dehydratase; NmrA family protein; KEGG: ajs:Ajs_0642 NmrA family protein; NmrA family protein complement(640597..641232) Acidovorax ebreus TPSY 7382995 YP_002552102.1 CDS Dtpsy_0622 NC_011992.1 641348 642250 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_0643 LysR family transcriptional regulator; transcriptional regulator, LysR family 641348..642250 Acidovorax ebreus TPSY 7382996 YP_002552103.1 CDS Dtpsy_0623 NC_011992.1 642345 642935 R KEGG: bwe:BcerKBAB4_2465 hypothetical protein; hypothetical protein complement(642345..642935) Acidovorax ebreus TPSY 7382997 YP_002552104.1 CDS Dtpsy_0624 NC_011992.1 643321 644382 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ajs:Ajs_0645 alcohol dehydrogenase; Alcohol dehydrogenase zinc-binding domain protein 643321..644382 Acidovorax ebreus TPSY 7382998 YP_002552105.1 CDS infA NC_011992.1 644379 644648 R stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 complement(644379..644648) Acidovorax ebreus TPSY 7382999 YP_002552106.1 CDS Dtpsy_0626 NC_011992.1 645153 648566 D KEGG: ajs:Ajs_0647 multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; CHASE3 domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase 645153..648566 Acidovorax ebreus TPSY 7383000 YP_002552107.1 CDS Dtpsy_0627 NC_011992.1 648610 649443 D PFAM: MCP methyltransferase CheR-type; SMART: MCP methyltransferase CheR-type; KEGG: ajs:Ajs_0648 MCP methyltransferase, CheR-type; MCP methyltransferase, CheR-type 648610..649443 Acidovorax ebreus TPSY 7383001 YP_002552108.1 CDS Dtpsy_0628 NC_011992.1 649440 650039 D PFAM: CheB methylesterase; KEGG: ajs:Ajs_0649 CheB methylesterase; CheB methylesterase 649440..650039 Acidovorax ebreus TPSY 7383002 YP_002552109.1 CDS Dtpsy_0629 NC_011992.1 650036 651184 D PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ajs:Ajs_0650 response regulator receiver sensor signal transduction histidine kinase; response regulator receiver sensor signal transduction histidine kinase 650036..651184 Acidovorax ebreus TPSY 7383003 YP_002552110.1 CDS Dtpsy_0630 NC_011992.1 651237 651608 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: ajs:Ajs_0651 response regulator receiver protein; response regulator receiver protein complement(651237..651608) Acidovorax ebreus TPSY 7383004 YP_002552111.1 CDS Dtpsy_0631 NC_011992.1 651768 652430 R PFAM: 2OG-Fe(II) oxygenase; KEGG: ajs:Ajs_0652 DNA-N1-methyladenine dioxygenase; 2OG-Fe(II) oxygenase complement(651768..652430) Acidovorax ebreus TPSY 7383005 YP_002552112.1 CDS Dtpsy_0632 NC_011992.1 652614 654212 D PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_0653 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 652614..654212 Acidovorax ebreus TPSY 7383006 YP_002552113.1 CDS Dtpsy_0633 NC_011992.1 654284 654946 D PFAM: DSBA oxidoreductase; KEGG: ajs:Ajs_0654 DsbA oxidoreductase; DSBA oxidoreductase 654284..654946 Acidovorax ebreus TPSY 7383007 YP_002552114.1 CDS Dtpsy_0634 NC_011992.1 655015 655521 R PFAM: CreA family protein; KEGG: ajs:Ajs_0655 CreA family protein; CreA family protein complement(655015..655521) Acidovorax ebreus TPSY 7383008 YP_002552115.1 CDS Dtpsy_0635 NC_011992.1 655518 658103 R catalyze the formation of cyanophycin which may act to store excess nitrogen; cyanophycin synthetase complement(655518..658103) Acidovorax ebreus TPSY 7383009 YP_002552116.1 CDS Dtpsy_0636 NC_011992.1 658198 660369 R catalyze the formation of cyanophycin which may act to store excess nitrogen; cyanophycin synthetase complement(658198..660369) Acidovorax ebreus TPSY 7383010 YP_002552117.1 CDS Dtpsy_0637 NC_011992.1 660621 662933 D PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_0658 ABC transporter related; ABC transporter related 660621..662933 Acidovorax ebreus TPSY 7383011 YP_002552118.1 CDS Dtpsy_0638 NC_011992.1 662950 663456 D PFAM: Domain of unknown function DUF1854; KEGG: ajs:Ajs_0659 hypothetical protein; hypothetical protein 662950..663456 Acidovorax ebreus TPSY 7383012 YP_002552119.1 CDS Dtpsy_0639 NC_011992.1 663652 664092 D KEGG: ajs:Ajs_0660 hypothetical protein; hypothetical protein 663652..664092 Acidovorax ebreus TPSY 7383013 YP_002552120.1 CDS Dtpsy_0640 NC_011992.1 664193 664570 R PFAM: Calcium-binding EF-hand-containing protein; KEGG: ajs:Ajs_0661 signal transduction protein; putative signal transduction protein with EFhand domain complement(664193..664570) Acidovorax ebreus TPSY 7383014 YP_002552121.1 CDS Dtpsy_0641 NC_011992.1 664602 665543 R PFAM: 5-nucleotidase; KEGG: ajs:Ajs_0662 5-nucleotidase; 5'-nucleotidase complement(664602..665543) Acidovorax ebreus TPSY 7383015 YP_002552122.1 CDS Dtpsy_0642 NC_011992.1 665540 666769 R TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: ajs:Ajs_0663 general secretion pathway protein F; general secretion pathway protein F complement(665540..666769) Acidovorax ebreus TPSY 7383016 YP_002552123.1 CDS Dtpsy_0643 NC_011992.1 666831 667862 R TIGRFAM: Luciferase-like monooxygenase; PFAM: Luciferase-like monooxygenase; KEGG: ajs:Ajs_0664 luciferase family protein; Luciferase-like monooxygenase complement(666831..667862) Acidovorax ebreus TPSY 7383017 YP_002552124.1 CDS Dtpsy_0644 NC_011992.1 668059 668583 D KEGG: ajs:Ajs_0665 hypothetical protein; hypothetical protein 668059..668583 Acidovorax ebreus TPSY 7383018 YP_002552125.1 CDS Dtpsy_0645 NC_011992.1 668714 670102 R KEGG: ajs:Ajs_0666 general secretory pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase; general secretory pathway protein E complement(668714..670102) Acidovorax ebreus TPSY 7383019 YP_002552126.1 CDS Dtpsy_0646 NC_011992.1 670114 672459 R TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: ajs:Ajs_0667 general secretion pathway protein D; general secretion pathway protein D complement(670114..672459) Acidovorax ebreus TPSY 7384389 YP_002552127.1 CDS Dtpsy_0647 NC_011992.1 672464 673276 R KEGG: ajs:Ajs_0668 putative general secretory pathway N transmembrane protein; putative general secretory pathway N transmembrane protein complement(672464..673276) Acidovorax ebreus TPSY 7384152 YP_002552128.1 CDS Dtpsy_0648 NC_011992.1 673293 673838 R KEGG: ajs:Ajs_0669 hypothetical protein; hypothetical protein complement(673293..673838) Acidovorax ebreus TPSY 7384153 YP_002552129.1 CDS Dtpsy_0649 NC_011992.1 673835 675064 R PFAM: General secretion pathway L; KEGG: ajs:Ajs_0670 general secretion pathway L; General secretion pathway L complement(673835..675064) Acidovorax ebreus TPSY 7384154 YP_002552130.1 CDS Dtpsy_0650 NC_011992.1 675124 676071 R KEGG: ajs:Ajs_0671 general secretion pathway protein K; general secretion pathway protein K complement(675124..676071) Acidovorax ebreus TPSY 7384155 YP_002552131.1 CDS Dtpsy_0651 NC_011992.1 676254 676931 R KEGG: ajs:Ajs_0672 hypothetical protein; hypothetical protein complement(676254..676931) Acidovorax ebreus TPSY 7384156 YP_002552132.1 CDS Dtpsy_0652 NC_011992.1 677083 677481 R TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J; KEGG: ajs:Ajs_0673 general secretion pathway protein I; general secretion pathway protein I complement(677083..677481) Acidovorax ebreus TPSY 7384157 YP_002552133.1 CDS Dtpsy_0653 NC_011992.1 677478 678026 R TIGRFAM: general secretion pathway protein H; KEGG: ajs:Ajs_0674 general secretion pathway protein H; general secretion pathway protein H complement(677478..678026) Acidovorax ebreus TPSY 7384158 YP_002552134.1 CDS Dtpsy_0654 NC_011992.1 678060 678539 R TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: ajs:Ajs_0675 general secretion pathway protein G; general secretion pathway protein G complement(678060..678539) Acidovorax ebreus TPSY 7384159 YP_002552135.1 CDS Dtpsy_0655 NC_011992.1 678563 679012 D KEGG: ajs:Ajs_0676 hypothetical protein; hypothetical protein 678563..679012 Acidovorax ebreus TPSY 7384160 YP_002552136.1 CDS Dtpsy_0656 NC_011992.1 679070 679681 R PFAM: Phosphoglycerate mutase; KEGG: ajs:Ajs_0677 phosphoglycerate mutase; Phosphoglycerate mutase complement(679070..679681) Acidovorax ebreus TPSY 7384161 YP_002552137.1 CDS Dtpsy_0657 NC_011992.1 679678 680490 R PFAM: cobalamin-5-phosphate synthase CobS; KEGG: ajs:Ajs_0678 cobalamin-5'-phosphate synthase; cobalamin-5-phosphate synthase CobS complement(679678..680490) Acidovorax ebreus TPSY 7384162 YP_002552138.1 CDS Dtpsy_0658 NC_011992.1 680557 682119 R threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway; threonine dehydratase complement(680557..682119) Acidovorax ebreus TPSY 7384163 YP_002552139.1 CDS Dtpsy_0659 NC_011992.1 682442 682891 D PFAM: OsmC family protein; KEGG: ajs:Ajs_0680 OsmC family protein; OsmC family protein 682442..682891 Acidovorax ebreus TPSY 7384164 YP_002552140.1 CDS Dtpsy_0660 NC_011992.1 682908 683525 R KEGG: ajs:Ajs_0681 putative ubiquinone biosynthesis protein; putative ubiquinone biosynthesis protein complement(682908..683525) Acidovorax ebreus TPSY 7384165 YP_002552141.1 CDS Dtpsy_0661 NC_011992.1 683837 684925 D PFAM: porin Gram-negative type; KEGG: ajs:Ajs_0682 porin; porin Gram-negative type 683837..684925 Acidovorax ebreus TPSY 7384166 YP_002552142.1 CDS Dtpsy_0662 NC_011992.1 685258 686451 D PFAM: porin Gram-negative type; KEGG: eugene3.77300001.; porin Gram-negative type 685258..686451 Acidovorax ebreus TPSY 7384167 YP_002552143.1 CDS Dtpsy_0663 NC_011992.1 686703 688283 D PFAM: extracellular solute-binding protein family 5; KEGG: ajs:Ajs_0685 extracellular solute-binding protein; extracellular solute-binding protein family 5 686703..688283 Acidovorax ebreus TPSY 7384168 YP_002552144.1 CDS Dtpsy_0664 NC_011992.1 688433 689416 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_0686 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 688433..689416 Acidovorax ebreus TPSY 7384169 YP_002552145.1 CDS Dtpsy_0665 NC_011992.1 689418 690644 D KEGG: ajs:Ajs_0687 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 689418..690644 Acidovorax ebreus TPSY 7384170 YP_002552146.1 CDS Dtpsy_0666 NC_011992.1 690685 692256 D PFAM: extracellular solute-binding protein family 5; KEGG: ajs:Ajs_0688 extracellular solute-binding protein; extracellular solute-binding protein family 5 690685..692256 Acidovorax ebreus TPSY 7384171 YP_002552147.1 CDS Dtpsy_0667 NC_011992.1 692304 693215 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_0689 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 692304..693215 Acidovorax ebreus TPSY 7384172 YP_002552148.1 CDS Dtpsy_0668 NC_011992.1 693398 694375 D KEGG: ajs:Ajs_0690 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter, ATPase subunit 693398..694375 Acidovorax ebreus TPSY 7384173 YP_002552149.1 CDS Dtpsy_0669 NC_011992.1 694372 695406 D KEGG: ajs:Ajs_0691 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter, ATPase subunit 694372..695406 Acidovorax ebreus TPSY 7384174 YP_002552150.1 CDS Dtpsy_0670 NC_011992.1 695584 697497 D PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: ajs:Ajs_0692 5'-nucleotidase; 5'-nucleotidase 695584..697497 Acidovorax ebreus TPSY 7384175 YP_002552151.1 CDS Dtpsy_0671 NC_011992.1 697576 698070 D PFAM: PEBP family protein; KEGG: ajs:Ajs_0693 PBP family phospholipid-binding protein; PEBP family protein 697576..698070 Acidovorax ebreus TPSY 7384176 YP_002552152.1 CDS Dtpsy_0672 NC_011992.1 698331 699176 R PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: ajs:Ajs_0694 RpiR family transcriptional regulator; transcriptional regulator, RpiR family complement(698331..699176) Acidovorax ebreus TPSY 7384177 YP_002552153.1 CDS Dtpsy_0673 NC_011992.1 699170 700645 R catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase complement(699170..700645) Acidovorax ebreus TPSY 7384178 YP_002552154.1 CDS Dtpsy_0674 NC_011992.1 700841 701791 D KEGG: ajs:Ajs_0696 transaldolase B; TIGRFAM: transaldolase; PFAM: Transaldolase; transaldolase B 700841..701791 Acidovorax ebreus TPSY 7384179 YP_002552155.1 CDS pgi NC_011992.1 701788 703404 D functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 701788..703404 Acidovorax ebreus TPSY 7384180 YP_002552156.1 CDS Dtpsy_0676 NC_011992.1 703435 704601 R KEGG: ajs:Ajs_0698 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(703435..704601) Acidovorax ebreus TPSY 7384181 YP_002552157.1 CDS groEL NC_011992.1 704872 706512 R 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL complement(704872..706512) Acidovorax ebreus TPSY 7384182 YP_002552158.1 CDS groES NC_011992.1 706603 706893 R 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES complement(706603..706893) Acidovorax ebreus TPSY 7384183 YP_002552159.1 CDS Dtpsy_0679 NC_011992.1 707104 708138 R TIGRFAM: cytidyltransferase-related domain protein; PFAM: NUDIX hydrolase; cytidylyltransferase; KEGG: ajs:Ajs_0701 cytidyltransferase-like protein; cytidyltransferase-related domain protein complement(707104..708138) Acidovorax ebreus TPSY 7384184 YP_002552160.1 CDS Dtpsy_0680 NC_011992.1 708194 709051 R KEGG: ajs:Ajs_0702 hypothetical protein; hypothetical protein complement(708194..709051) Acidovorax ebreus TPSY 7384185 YP_002552161.1 CDS Dtpsy_0681 NC_011992.1 709118 709387 R PFAM: protein of unknown function DUF1328; KEGG: ajs:Ajs_0703 hypothetical protein; hypothetical protein complement(709118..709387) Acidovorax ebreus TPSY 7384186 YP_002552162.1 CDS Dtpsy_0682 NC_011992.1 709445 710173 D KEGG: NACA, TEBP; nascent polypeptide-associated complex alpha subunit; hypothetical protein 709445..710173 Acidovorax ebreus TPSY 7384187 YP_002552163.1 CDS Dtpsy_0683 NC_011992.1 710086 711267 R catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase complement(710086..711267) Acidovorax ebreus TPSY 7384188 YP_002552164.1 CDS Dtpsy_0684 NC_011992.1 711400 712275 D PFAM: lipid A biosynthesis acyltransferase; KEGG: ajs:Ajs_0706 lipid A biosynthesis acyltransferase; lipid A biosynthesis acyltransferase 711400..712275 Acidovorax ebreus TPSY 7384189 YP_002552165.1 CDS Dtpsy_0685 NC_011992.1 712272 713144 D PFAM: lipid A biosynthesis acyltransferase; KEGG: ajs:Ajs_0707 lipid A biosynthesis acyltransferase; lipid A biosynthesis acyltransferase 712272..713144 Acidovorax ebreus TPSY 7384190 YP_002552166.1 CDS Dtpsy_0686 NC_011992.1 713239 714327 D PFAM: transposase IS4 family protein; KEGG: ajs:Ajs_3918 transposase, IS4 family protein; transposase IS4 family protein 713239..714327 Acidovorax ebreus TPSY 7384191 YP_002552167.1 CDS Dtpsy_0688 NC_011992.1 714515 715444 R PFAM: alpha/beta hydrolase fold; KEGG: ajs:Ajs_0708 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(714515..715444) Acidovorax ebreus TPSY 7384193 YP_002552168.1 CDS engB NC_011992.1 715493 716149 R binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC complement(715493..716149) Acidovorax ebreus TPSY 7384194 YP_002552169.1 CDS Dtpsy_0690 NC_011992.1 716300 716938 D PFAM: cytochrome c class I; KEGG: ajs:Ajs_0710 cytochrome c, class I; cytochrome c class I 716300..716938 Acidovorax ebreus TPSY 7384195 YP_002552170.1 CDS Dtpsy_0691 NC_011992.1 717107 719260 D PFAM: ResB family protein; KEGG: ajs:Ajs_0711 ResB family protein; ResB family protein 717107..719260 Acidovorax ebreus TPSY 7384196 YP_002552171.1 CDS Dtpsy_0692 NC_011992.1 719257 720591 D TIGRFAM: cytochrome c-type biogenesis protein CcsB; PFAM: cytochrome c assembly protein; KEGG: ajs:Ajs_0712 cytochrome c assembly protein; cytochrome c-type biogenesis protein CcsB 719257..720591 Acidovorax ebreus TPSY 7384197 YP_002552172.1 CDS Dtpsy_0693 NC_011992.1 720683 721681 D in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; putative sulfite oxidase subunit YedY 720683..721681 Acidovorax ebreus TPSY 7384198 YP_002552173.1 CDS Dtpsy_0694 NC_011992.1 721681 722340 D PFAM: Ferric reductase domain protein transmembrane component domain; KEGG: ajs:Ajs_0714 ferric reductase domain-containing protein; Ferric reductase domain protein transmembrane component 721681..722340 Acidovorax ebreus TPSY 7384199 YP_002552174.1 CDS Dtpsy_0695 NC_011992.1 722407 723243 R PFAM: beta-lactamase domain protein; KEGG: ajs:Ajs_0715 beta-lactamase domain-containing protein; beta-lactamase domain protein complement(722407..723243) Acidovorax ebreus TPSY 7384200 YP_002552175.1 CDS Dtpsy_0696 NC_011992.1 723308 724603 R TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: ajs:Ajs_0716 diaminopimelate decarboxylase; diaminopimelate decarboxylase complement(723308..724603) Acidovorax ebreus TPSY 7384201 YP_002552176.1 CDS Dtpsy_0697 NC_011992.1 724822 725151 D TIGRFAM: iron donor protein CyaY; PFAM: Frataxin family protein; KEGG: ajs:Ajs_0728 frataxin family protein; iron donor protein CyaY 724822..725151 Acidovorax ebreus TPSY 7384202 YP_002552177.1 CDS Dtpsy_0698 NC_011992.1 725227 727566 R KEGG: ajs:Ajs_0729 1A family penicillin-binding protein; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; penicillin-binding protein, 1A family complement(725227..727566) Acidovorax ebreus TPSY 7384203 YP_002552178.1 CDS Dtpsy_0699 NC_011992.1 727874 728944 D TIGRFAM: type IV pilus assembly protein PilM; KEGG: ajs:Ajs_0730 type IV pilus assembly protein PilM; type IV pilus assembly protein PilM 727874..728944 Acidovorax ebreus TPSY 7384204 YP_002552179.1 CDS Dtpsy_0700 NC_011992.1 728941 729552 D PFAM: Fimbrial assembly family protein; KEGG: ajs:Ajs_0731 fimbrial assembly family protein; Fimbrial assembly family protein 728941..729552 Acidovorax ebreus TPSY 7384205 YP_002552180.1 CDS Dtpsy_0701 NC_011992.1 729554 730228 D PFAM: Pilus assembly protein PilO; KEGG: ajs:Ajs_0732 pilus assembly protein, PilO; Pilus assembly protein PilO 729554..730228 Acidovorax ebreus TPSY 7384206 YP_002552181.1 CDS Dtpsy_0702 NC_011992.1 730225 730776 D PFAM: Pilus assembly protein PilP; KEGG: ajs:Ajs_0733 pilus assembly protein, PilQ; Pilus assembly protein PilP 730225..730776 Acidovorax ebreus TPSY 7384207 YP_002552182.1 CDS Dtpsy_0703 NC_011992.1 730773 732863 D TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB short domain; KEGG: ajs:Ajs_0734 type IV pilus secretin PilQ; type IV pilus secretin PilQ 730773..732863 Acidovorax ebreus TPSY 7384208 YP_002552183.1 CDS aroB NC_011992.1 732935 734038 D catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 732935..734038 Acidovorax ebreus TPSY 7384209 YP_002552184.1 CDS Dtpsy_0705 NC_011992.1 734114 735268 D dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein 734114..735268 Acidovorax ebreus TPSY 7384210 YP_002552185.1 CDS Dtpsy_0706 NC_011992.1 735357 735974 D PFAM: protein of unknown function DUF1415; KEGG: ajs:Ajs_0737 hypothetical protein; protein of unknown function DUF1415 735357..735974 Acidovorax ebreus TPSY 7384211 YP_002552186.1 CDS Dtpsy_0707 NC_011992.1 735971 736900 D KEGG: aav:Aave_1006 hypothetical protein; hypothetical protein 735971..736900 Acidovorax ebreus TPSY 7384212 YP_002552187.1 CDS Dtpsy_0708 NC_011992.1 736983 737684 D PFAM: protein of unknown function DUF1568; KEGG: ajs:Ajs_0740 hypothetical protein; protein of unknown function DUF1568 736983..737684 Acidovorax ebreus TPSY 7384213 YP_002552188.1 CDS Dtpsy_0709 NC_011992.1 737866 742599 D PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: ajs:Ajs_0741 glutamate synthase (NADH) large subunit; Glutamate synthase (ferredoxin) 737866..742599 Acidovorax ebreus TPSY 7384214 YP_002552189.1 CDS gltD NC_011992.1 742663 744141 D glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 742663..744141 Acidovorax ebreus TPSY 7384215 YP_002552190.1 CDS Dtpsy_0711 NC_011992.1 744459 745259 D PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; extracellular solute-binding protein family 3; KEGG: ajs:Ajs_0743 extracellular solute-binding protein; extracellular solute-binding protein family 3 744459..745259 Acidovorax ebreus TPSY 7384216 YP_002552191.1 CDS Dtpsy_0712 NC_011992.1 745419 746072 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_0744 polar amino acid ABC transporter, inner membrane subunit; polar amino acid ABC transporter, inner membrane subunit 745419..746072 Acidovorax ebreus TPSY 7384217 YP_002552192.1 CDS Dtpsy_0713 NC_011992.1 746053 746835 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_0745 ABC transporter related; ABC transporter related 746053..746835 Acidovorax ebreus TPSY 7384218 YP_002552193.1 CDS Dtpsy_0714 NC_011992.1 747028 747990 R catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase complement(747028..747990) Acidovorax ebreus TPSY 7384219 YP_002552194.1 CDS Dtpsy_0715 NC_011992.1 747990 748400 R TIGRFAM: S-adenosylmethionine decarboxylase proenzyme; PFAM: S-adenosylmethionine decarboxylase related; KEGG: ajs:Ajs_0747 S-adenosylmethionine decarboxylase related; S-adenosylmethionine decarboxylase proenzyme complement(747990..748400) Acidovorax ebreus TPSY 7384220 YP_002552195.1 CDS Dtpsy_0716 NC_011992.1 748764 749624 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_0748 ABC transporter related; ABC transporter related 748764..749624 Acidovorax ebreus TPSY 7384221 YP_002552196.1 CDS Dtpsy_0717 NC_011992.1 749621 750403 D PFAM: protein of unknown function DUF140; KEGG: ajs:Ajs_0749 hypothetical protein; protein of unknown function DUF140 749621..750403 Acidovorax ebreus TPSY 7384222 YP_002552197.1 CDS Dtpsy_0718 NC_011992.1 750438 750923 D PFAM: Mammalian cell entry related domain protein; KEGG: ajs:Ajs_0750 hypothetical protein; Mammalian cell entry related domain protein 750438..750923 Acidovorax ebreus TPSY 7384223 YP_002552198.1 CDS Dtpsy_0719 NC_011992.1 750920 751672 D PFAM: VacJ family lipoprotein; KEGG: ajs:Ajs_0751 VacJ family lipoprotein; VacJ family lipoprotein 750920..751672 Acidovorax ebreus TPSY 7384224 YP_002552199.1 CDS Dtpsy_0720 NC_011992.1 751851 752498 D PFAM: toluene tolerance family protein; KEGG: ajs:Ajs_0752 toluene tolerance family protein; toluene tolerance family protein 751851..752498 Acidovorax ebreus TPSY 7384225 YP_002552200.1 CDS Dtpsy_0721 NC_011992.1 752535 752804 D KEGG: ajs:Ajs_0753 sulfate transporter/antisigma-factor antagonist STAS; sulfate transporter/antisigma-factor antagonist STAS 752535..752804 Acidovorax ebreus TPSY 7384226 YP_002552201.1 CDS Dtpsy_0722 NC_011992.1 752902 753819 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_0755 ABC transporter related; ABC transporter related 752902..753819 Acidovorax ebreus TPSY 7384227 YP_002552202.1 CDS Dtpsy_0723 NC_011992.1 753816 754571 D PFAM: ABC-2 type transporter; KEGG: ajs:Ajs_0756 ABC-2 type transporter; ABC-2 type transporter 753816..754571 Acidovorax ebreus TPSY 7384228 YP_002552203.1 CDS Dtpsy_0724 NC_011992.1 754573 754821 D PFAM: BolA family protein; KEGG: ajs:Ajs_0757 BolA family protein; BolA family protein 754573..754821 Acidovorax ebreus TPSY 7384229 YP_002552204.1 CDS Dtpsy_0725 NC_011992.1 755043 756365 D adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 755043..756365 Acidovorax ebreus TPSY 7384230 YP_002552205.1 CDS hisG NC_011992.1 756362 757012 D short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; ATP phosphoribosyltransferase catalytic subunit 756362..757012 Acidovorax ebreus TPSY 7384231 YP_002552206.1 CDS hisD NC_011992.1 757177 758496 D catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 757177..758496 Acidovorax ebreus TPSY 7384232 YP_002552207.1 CDS Dtpsy_0728 NC_011992.1 758661 759362 D KEGG: ajs:Ajs_0761 hypothetical protein; hypothetical protein 758661..759362 Acidovorax ebreus TPSY 7385328 YP_002552208.1 CDS Dtpsy_0729 NC_011992.1 759401 760507 D catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 759401..760507 Acidovorax ebreus TPSY 7383667 YP_002552209.1 CDS hisB NC_011992.1 760504 761136 D catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase 760504..761136 Acidovorax ebreus TPSY 7383668 YP_002552210.1 CDS hisH NC_011992.1 761187 761855 D with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 761187..761855 Acidovorax ebreus TPSY 7383669 YP_002552211.1 CDS Dtpsy_0732 NC_011992.1 761914 762657 D catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 761914..762657 Acidovorax ebreus TPSY 7383670 YP_002552212.1 CDS Dtpsy_0733 NC_011992.1 762703 763773 R KEGG: asa:ASA_0611 hypothetical protein; Multidrug resistance efflux pump-like protein complement(762703..763773) Acidovorax ebreus TPSY 7383671 YP_002552213.1 CDS Dtpsy_0734 NC_011992.1 763770 765884 R KEGG: pzu:PHZ_p0238 metal ion efflux outer membrane factor protein family protein; Outer membrane protein-like protein complement(763770..765884) Acidovorax ebreus TPSY 7383672 YP_002552214.1 CDS Dtpsy_0735 NC_011992.1 765886 767211 R PFAM: glycosyl transferase family 2; chitin synthase; KEGG: vpa:VPA0393 hypothetical protein; glycosyl transferase family 2 complement(765886..767211) Acidovorax ebreus TPSY 7383673 YP_002552215.1 CDS Dtpsy_0736 NC_011992.1 767218 768612 R KEGG: sbn:Sbal195_0447 hypothetical protein; hypothetical protein complement(767218..768612) Acidovorax ebreus TPSY 7383674 YP_002552216.1 CDS Dtpsy_0737 NC_011992.1 768845 769864 D TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KR domain protein; KEGG: aav:Aave_1044 UDP-galactose 4-epimerase; UDP-glucose 4-epimerase 768845..769864 Acidovorax ebreus TPSY 7383675 YP_002552217.1 CDS Dtpsy_0738 NC_011992.1 770023 770802 D catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 770023..770802 Acidovorax ebreus TPSY 7383676 YP_002552218.1 CDS hisI NC_011992.1 770907 771305 D PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; phosphoribosyl-AMP cyclohydrolase 770907..771305 Acidovorax ebreus TPSY 7383677 YP_002552219.1 CDS hisE NC_011992.1 771312 771710 D catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; phosphoribosyl-ATP pyrophosphatase 771312..771710 Acidovorax ebreus TPSY 7383678 YP_002552220.1 CDS Dtpsy_0741 NC_011992.1 771710 772096 D KEGG: ajs:Ajs_0778 putative transmembrane protein; putative transmembrane protein 771710..772096 Acidovorax ebreus TPSY 7383679 YP_002552221.1 CDS Dtpsy_0742 NC_011992.1 772089 773129 D PFAM: Patatin; KEGG: ajs:Ajs_0779 patatin; Patatin 772089..773129 Acidovorax ebreus TPSY 7383680 YP_002552222.1 CDS Dtpsy_0743 NC_011992.1 773169 773528 D PFAM: histidine triad (HIT) protein; KEGG: ajs:Ajs_0780 histidine triad (HIT) protein; histidine triad (HIT) protein 773169..773528 Acidovorax ebreus TPSY 7383681 YP_002552223.1 CDS tatA NC_011992.1 773624 773872 D TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase protein A 773624..773872 Acidovorax ebreus TPSY 7383682 YP_002552224.1 CDS tatB NC_011992.1 773905 774384 D TIGRFAM: twin-arginine translocation protein, TatB subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: ajs:Ajs_0782 sec-independent translocase; sec-independent translocase 773905..774384 Acidovorax ebreus TPSY 7383683 YP_002552225.1 CDS Dtpsy_0746 NC_011992.1 774447 775235 D TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: ajs:Ajs_0783 sec-independent protein translocase TatC; Sec-independent protein translocase, TatC subunit 774447..775235 Acidovorax ebreus TPSY 7383684 YP_002552226.1 CDS Dtpsy_0747 NC_011992.1 775371 776510 R KEGG: ajs:Ajs_0784 peptidase S1 and S6, chymotrypsin/Hap; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; 2-alkenal reductase complement(775371..776510) Acidovorax ebreus TPSY 7383685 YP_002552227.1 CDS Dtpsy_0748 NC_011992.1 776646 777989 R PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; FAD-binding 8 domain protein; Ferric reductase domain protein transmembrane component domain; KEGG: ajs:Ajs_0785 ferric reductase domain-containing protein; Ferric reductase domain protein transmembrane component complement(776646..777989) Acidovorax ebreus TPSY 7383686 YP_002552228.1 CDS Dtpsy_0749 NC_011992.1 778130 778894 D PFAM: protein of unknown function DUF34; KEGG: ajs:Ajs_0786 hypothetical protein; protein of unknown function DUF34 778130..778894 Acidovorax ebreus TPSY 7383687 YP_002552229.1 CDS Dtpsy_0750 NC_011992.1 778972 780027 D KEGG: ajs:Ajs_0787 4-hydroxythreonine-4-phosphate dehydrogenase; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; 4-hydroxythreonine-4-phosphate dehydrogenase 778972..780027 Acidovorax ebreus TPSY 7383688 YP_002552230.1 CDS mscL NC_011992.1 780102 780530 R homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel complement(780102..780530) Acidovorax ebreus TPSY 7383689 YP_002552231.1 CDS Dtpsy_0752 NC_011992.1 780665 781264 D KEGG: ajs:Ajs_0789 ubiquinol-cytochrome c reductase, iron-sulfur subunit; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein; Ubiquinol-cytochrome c reductase iron-sulfur subunit; ubiquinol-cytochrome c reductase, iron-sulfur subunit 780665..781264 Acidovorax ebreus TPSY 7383690 YP_002552232.1 CDS Dtpsy_0753 NC_011992.1 781280 782701 D PFAM: Cytochrome b/b6 domain; KEGG: ajs:Ajs_0790 cytochrome b/b6 domain-containing protein; Cytochrome b/b6 domain protein 781280..782701 Acidovorax ebreus TPSY 7383691 YP_002552233.1 CDS Dtpsy_0754 NC_011992.1 782718 783473 D PFAM: cytochrome c1; KEGG: ajs:Ajs_0791 cytochrome c1; cytochrome c1 782718..783473 Acidovorax ebreus TPSY 7383692 YP_002552234.1 CDS Dtpsy_0755 NC_011992.1 783569 784180 D PFAM: Glutathione S-transferase domain; KEGG: ajs:Ajs_0792 glutathione S-transferase domain-containing protein; Glutathione S-transferase domain protein 783569..784180 Acidovorax ebreus TPSY 7383693 YP_002552235.1 CDS Dtpsy_0756 NC_011992.1 784213 784740 D PFAM: Stringent starvation protein B; KEGG: ajs:Ajs_0793 stringent starvation protein B; Stringent starvation protein B 784213..784740 Acidovorax ebreus TPSY 7383694 YP_002552236.1 CDS Dtpsy_0757 NC_011992.1 784984 785283 R KEGG: ajs:Ajs_0794 hypothetical protein; hypothetical protein complement(784984..785283) Acidovorax ebreus TPSY 7383696 YP_002552237.1 CDS Dtpsy_0758 NC_011992.1 785412 786284 D PFAM: Peptidase M23; KEGG: ajs:Ajs_0795 peptidase M23B; Peptidase M23 785412..786284 Acidovorax ebreus TPSY 7383697 YP_002552238.1 CDS Dtpsy_0759 NC_011992.1 786420 789173 D functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 786420..789173 Acidovorax ebreus TPSY 7383698 YP_002552239.1 CDS argJ NC_011992.1 789274 790503 D bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 789274..790503 Acidovorax ebreus TPSY 7383699 YP_002552240.1 CDS Dtpsy_0761 NC_011992.1 790558 791436 D PFAM: protein of unknown function DUF815; KEGG: ajs:Ajs_0798 hypothetical protein; protein of unknown function DUF815 790558..791436 Acidovorax ebreus TPSY 7383700 YP_002552241.1 CDS Dtpsy_0762 NC_011992.1 791433 791879 D PFAM: NUDIX hydrolase; KEGG: ajs:Ajs_0799 NUDIX hydrolase; NUDIX hydrolase 791433..791879 Acidovorax ebreus TPSY 7383701 YP_002552242.1 CDS Dtpsy_0763 NC_011992.1 791949 792179 R PFAM: protein of unknown function DUF329; KEGG: ajs:Ajs_0800 hypothetical protein; protein of unknown function DUF329 complement(791949..792179) Acidovorax ebreus TPSY 7383702 YP_002552243.1 CDS Dtpsy_0764 NC_011992.1 792186 792941 R PFAM: protein of unknown function DUF1342; KEGG: ajs:Ajs_0801 hypothetical protein; hypothetical protein complement(792186..792941) Acidovorax ebreus TPSY 7383703 YP_002552244.1 CDS Dtpsy_0765 NC_011992.1 793032 793625 R KEGG: ajs:Ajs_0802 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; dephospho-CoA kinase complement(793032..793625) Acidovorax ebreus TPSY 7383704 YP_002552245.1 CDS Dtpsy_0766 NC_011992.1 793657 794538 R PFAM: peptidase A24A prepilin type IV; peptidase A24A domain protein; KEGG: ajs:Ajs_0803 Type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A; Prepilin peptidase complement(793657..794538) Acidovorax ebreus TPSY 7383705 YP_002552246.1 CDS Dtpsy_0767 NC_011992.1 794538 795755 R PFAM: type II secretion system protein; KEGG: ajs:Ajs_0804 type II secretion system protein; type II secretion system protein complement(794538..795755) Acidovorax ebreus TPSY 7383706 YP_002552247.1 CDS Dtpsy_0768 NC_011992.1 795776 797509 R KEGG: ajs:Ajs_0805 type IV-A pilus assembly ATPase PilB; TIGRFAM: type IV-A pilus assembly ATPase PilB; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; type IV-A pilus assembly ATPase PilB complement(795776..797509) Acidovorax ebreus TPSY 7383707 YP_002552248.1 CDS Dtpsy_0769 NC_011992.1 797846 798829 R PFAM: Polyprenyl synthetase; KEGG: ajs:Ajs_0840 dimethylallyltranstransferase; Polyprenyl synthetase complement(797846..798829) Acidovorax ebreus TPSY 7383709 YP_002552249.1 CDS rplU NC_011992.1 798999 799310 D TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21; KEGG: ajs:Ajs_0841 50S ribosomal protein L21P; 50S ribosomal protein L21 798999..799310 Acidovorax ebreus TPSY 7383710 YP_002552250.1 CDS rpmA NC_011992.1 799328 799585 D involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 799328..799585 Acidovorax ebreus TPSY 7383711 YP_002552251.1 CDS obgE NC_011992.1 799732 800805 D essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 799732..800805 Acidovorax ebreus TPSY 7383712 YP_002552252.1 CDS Dtpsy_0773 NC_011992.1 800879 802021 D catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 800879..802021 Acidovorax ebreus TPSY 7383713 YP_002552253.1 CDS Dtpsy_0774 NC_011992.1 802068 802757 R hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase complement(802068..802757) Acidovorax ebreus TPSY 7383714 YP_002552254.1 CDS Dtpsy_0775 NC_011992.1 802848 804593 D catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 802848..804593 Acidovorax ebreus TPSY 7383715 YP_002552255.1 CDS Dtpsy_0776 NC_011992.1 804614 805270 D PFAM: Lytic transglycosylase catalytic; KEGG: ajs:Ajs_0847 lytic transglycosylase, catalytic; Lytic transglycosylase catalytic 804614..805270 Acidovorax ebreus TPSY 7383716 YP_002552256.1 CDS Dtpsy_0777 NC_011992.1 805356 806672 R PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: ajs:Ajs_0848 hypothetical protein; protein of unknown function DUF21 complement(805356..806672) Acidovorax ebreus TPSY 7383717 YP_002552257.1 CDS Dtpsy_0778 NC_011992.1 806851 807180 R TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: ajs:Ajs_0849 glutaredoxin-like protein; glutaredoxin-like protein complement(806851..807180) Acidovorax ebreus TPSY 7383718 YP_002552258.1 CDS Dtpsy_0779 NC_011992.1 807235 808077 R TIGRFAM: modification methylase, HemK family; Methyltransferase type 12; PFAM: putative RNA methylase; methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: ajs:Ajs_0850 HemK family modification methylase; Methyltransferase type 12 complement(807235..808077) Acidovorax ebreus TPSY 7383719 YP_002552259.1 CDS prfA NC_011992.1 808135 809238 R recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 complement(808135..809238) Acidovorax ebreus TPSY 7383720 YP_002552260.1 CDS hemA NC_011992.1 809351 810661 R catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase complement(809351..810661) Acidovorax ebreus TPSY 7383721 YP_002552261.1 CDS Dtpsy_0782 NC_011992.1 810736 811014 D KEGG: ajs:Ajs_0853 hypothetical protein; hypothetical protein 810736..811014 Acidovorax ebreus TPSY 7383722 YP_002552262.1 CDS Dtpsy_0783 NC_011992.1 811016 811918 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_0854 LysR family transcriptional regulator; transcriptional regulator, LysR family complement(811016..811918) Acidovorax ebreus TPSY 7383723 YP_002552263.1 CDS Dtpsy_0784 NC_011992.1 812036 813022 D PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0855 hypothetical protein; hypothetical protein 812036..813022 Acidovorax ebreus TPSY 7383724 YP_002552264.1 CDS Dtpsy_0785 NC_011992.1 813033 813926 D PFAM: N-formylglutamate amidohydrolase; KEGG: ajs:Ajs_0856 N-formylglutamate amidohydrolase; N-formylglutamate amidohydrolase 813033..813926 Acidovorax ebreus TPSY 7383725 YP_002552265.1 CDS Dtpsy_0786 NC_011992.1 813999 816521 R PFAM: MscS Mechanosensitive ion channel; KEGG: ajs:Ajs_0857 MscS mechanosensitive ion channel; MscS Mechanosensitive ion channel complement(813999..816521) Acidovorax ebreus TPSY 7383726 YP_002552266.1 CDS Dtpsy_0787 NC_011992.1 816620 817369 R PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: ajs:Ajs_0858 glycerophosphodiester phosphodiesterase; Glycerophosphodiester phosphodiesterase complement(816620..817369) Acidovorax ebreus TPSY 7383727 YP_002552267.1 CDS Dtpsy_0788 NC_011992.1 817395 818402 R PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ajs:Ajs_0859 ABC transporter related; ABC transporter related complement(817395..818402) Acidovorax ebreus TPSY 7383728 YP_002552268.1 CDS Dtpsy_0789 NC_011992.1 818466 819314 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_0860 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component complement(818466..819314) Acidovorax ebreus TPSY 7383729 YP_002552269.1 CDS Dtpsy_0790 NC_011992.1 819317 820198 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_0861 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component complement(819317..820198) Acidovorax ebreus TPSY 7383730 YP_002552270.1 CDS Dtpsy_0791 NC_011992.1 820329 821642 R PFAM: extracellular solute-binding protein family 1; KEGG: ajs:Ajs_0862 extracellular solute-binding protein; extracellular solute-binding protein family 1 complement(820329..821642) Acidovorax ebreus TPSY 7383731 YP_002552271.1 CDS Dtpsy_0792 NC_011992.1 821954 823183 D PFAM: amino acid-binding ACT domain protein; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: ajs:Ajs_0863 D-3-phosphoglycerate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding 821954..823183 Acidovorax ebreus TPSY 7383732 YP_002552272.1 CDS Dtpsy_0793 NC_011992.1 823376 827299 D PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; FAD linked oxidase domain protein; KEGG: ajs:Ajs_0864 FAD linked oxidase domain-containing protein; FAD linked oxidase domain protein 823376..827299 Acidovorax ebreus TPSY 7383733 YP_002552273.1 CDS Dtpsy_0794 NC_011992.1 827311 827787 D PFAM: histidine triad (HIT) protein; KEGG: ajs:Ajs_0865 histidine triad (HIT) protein; histidine triad (HIT) protein 827311..827787 Acidovorax ebreus TPSY 7383734 YP_002552274.1 CDS Dtpsy_0795 NC_011992.1 827951 828367 D PFAM: protein of unknown function DUF971; KEGG: ajs:Ajs_0866 hypothetical protein; protein of unknown function DUF971 827951..828367 Acidovorax ebreus TPSY 7383735 YP_002552275.1 CDS Dtpsy_0796 NC_011992.1 828492 829223 D TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: ajs:Ajs_0867 ubiquinone/menaquinone biosynthesis methyltransferases; ubiquinone/menaquinone biosynthesis methyltransferase 828492..829223 Acidovorax ebreus TPSY 7383736 YP_002552276.1 CDS Dtpsy_0797 NC_011992.1 829262 830269 D PFAM: import inner membrane translocase subunit Tim44; KEGG: ajs:Ajs_0868 import inner membrane translocase, subunit Tim44; import inner membrane translocase subunit Tim44 829262..830269 Acidovorax ebreus TPSY 7383737 YP_002552277.1 CDS Dtpsy_0798 NC_011992.1 830350 830928 D KEGG: ajs:Ajs_0869 hypothetical protein; hypothetical protein 830350..830928 Acidovorax ebreus TPSY 7383738 YP_002552278.1 CDS ubiB NC_011992.1 830925 832490 D an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone; functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis; similar to eukaryotic proteins that exhibit kinase functions; putative ubiquinone biosynthesis protein UbiB 830925..832490 Acidovorax ebreus TPSY 7383739 YP_002552279.1 CDS Dtpsy_0800 NC_011992.1 832526 833977 D PFAM: Na+/solute symporter; KEGG: ajs:Ajs_0871 Na+/solute symporter; Na+/solute symporter 832526..833977 Acidovorax ebreus TPSY 7383740 YP_002552280.1 CDS Dtpsy_0801 NC_011992.1 834053 834325 D TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: ajs:Ajs_0872 FmdB family regulatory protein; regulatory protein, FmdB family 834053..834325 Acidovorax ebreus TPSY 7383741 YP_002552281.1 CDS Dtpsy_0802 NC_011992.1 834341 834964 D PFAM: protein of unknown function DUF502; KEGG: ajs:Ajs_0873 hypothetical protein; protein of unknown function DUF502 834341..834964 Acidovorax ebreus TPSY 7383742 YP_002552282.1 CDS aspS NC_011992.1 835057 836868 D catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 835057..836868 Acidovorax ebreus TPSY 7383743 YP_002552283.1 CDS Dtpsy_0804 NC_011992.1 836965 837768 D KEGG: ajs:Ajs_0875 hypothetical protein; hypothetical protein 836965..837768 Acidovorax ebreus TPSY 7383744 YP_002552284.1 CDS Dtpsy_0805 NC_011992.1 837779 838249 D PFAM: NUDIX hydrolase; KEGG: ajs:Ajs_0876 NUDIX hydrolase; NUDIX hydrolase 837779..838249 Acidovorax ebreus TPSY 7383745 YP_002552285.1 CDS Dtpsy_0806 NC_011992.1 838246 839013 D PFAM: Endonuclease/exonuclease/phosphatase; KEGG: ajs:Ajs_0877 endonuclease/exonuclease/phosphatase; Endonuclease/exonuclease/phosphatase 838246..839013 Acidovorax ebreus TPSY 7383746 YP_002552286.1 CDS Dtpsy_0807 NC_011992.1 839018 840247 D PFAM: phospholipase D/Transphosphatidylase; KEGG: ajs:Ajs_0878 phospholipase D/transphosphatidylase; phospholipase D/Transphosphatidylase 839018..840247 Acidovorax ebreus TPSY 7383747 YP_002552287.1 CDS Dtpsy_0808 NC_011992.1 840374 841099 D PFAM: GTP cyclohydrolase I; KEGG: ajs:Ajs_0879 GTP cyclohydrolase; GTP cyclohydrolase I 840374..841099 Acidovorax ebreus TPSY 7383822 YP_002552288.1 CDS Dtpsy_0809 NC_011992.1 841103 841525 D PFAM: BLUF domain protein; KEGG: ajs:Ajs_0880 BLUF domain-containing protein; BLUF domain protein 841103..841525 Acidovorax ebreus TPSY 7383503 YP_002552289.1 CDS Dtpsy_0810 NC_011992.1 841746 842627 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: ajs:Ajs_0881 hypothetical protein; protein of unknown function DUF6 transmembrane 841746..842627 Acidovorax ebreus TPSY 7383504 YP_002552290.1 CDS Dtpsy_0811 NC_011992.1 842901 843719 D KEGG: ajs:Ajs_0882 hypothetical protein; hypothetical protein 842901..843719 Acidovorax ebreus TPSY 7383505 YP_002552291.1 CDS Dtpsy_0812 NC_011992.1 843709 844395 R KEGG: ajs:Ajs_0883 hypothetical protein; hypothetical protein complement(843709..844395) Acidovorax ebreus TPSY 7383506 YP_002552292.1 CDS Dtpsy_0813 NC_011992.1 844471 845082 R KEGG: ajs:Ajs_0884 hypothetical protein; hypothetical protein complement(844471..845082) Acidovorax ebreus TPSY 7383507 YP_002552293.1 CDS Dtpsy_0815 NC_011992.1 845936 847339 R catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase complement(845936..847339) Acidovorax ebreus TPSY 7383509 YP_002552294.1 CDS Dtpsy_0816 NC_011992.1 847443 848933 R PFAM: extracellular solute-binding protein family 5; KEGG: ajs:Ajs_0887 extracellular solute-binding protein; extracellular solute-binding protein family 5 complement(847443..848933) Acidovorax ebreus TPSY 7383510 YP_002552295.1 CDS Dtpsy_0817 NC_011992.1 849032 849889 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_0888 ABC transporter related; ABC transporter related complement(849032..849889) Acidovorax ebreus TPSY 7383511 YP_002552296.1 CDS Dtpsy_0818 NC_011992.1 849886 850890 R KEGG: ajs:Ajs_0889 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter, ATPase subunit complement(849886..850890) Acidovorax ebreus TPSY 7383512 YP_002552297.1 CDS Dtpsy_0819 NC_011992.1 850887 851762 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_0890 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component complement(850887..851762) Acidovorax ebreus TPSY 7383513 YP_002552298.1 CDS Dtpsy_0820 NC_011992.1 851759 852721 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_0891 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component complement(851759..852721) Acidovorax ebreus TPSY 7383514 YP_002552299.1 CDS Dtpsy_0821 NC_011992.1 852897 853154 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ajs:Ajs_0892 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein 852897..853154 Acidovorax ebreus TPSY 7383515 YP_002552300.1 CDS Dtpsy_0822 NC_011992.1 853218 853853 R Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase complement(853218..853853) Acidovorax ebreus TPSY 7383516 YP_002552301.1 CDS Dtpsy_0823 NC_011992.1 853989 854615 R the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc complement(853989..854615) Acidovorax ebreus TPSY 7383517 YP_002552302.1 CDS Dtpsy_0824 NC_011992.1 854769 855734 R KEGG: ajs:Ajs_0895 fis family transcriptional regulator; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase complement(854769..855734) Acidovorax ebreus TPSY 7383518 YP_002552303.1 CDS ipk NC_011992.1 855900 856751 R An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase complement(855900..856751) Acidovorax ebreus TPSY 7383520 YP_002552304.1 CDS Dtpsy_0826 NC_011992.1 856761 857276 R KEGG: ajs:Ajs_0897 putative lipoprotein; putative lipoprotein complement(856761..857276) Acidovorax ebreus TPSY 7383521 YP_002552305.1 CDS Dtpsy_0827 NC_011992.1 857273 858997 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: ajs:Ajs_0898 TPR repeat-containing protein; TPR repeat-containing protein complement(857273..858997) Acidovorax ebreus TPSY 7383522 YP_002552306.1 CDS Dtpsy_0828 NC_011992.1 859102 859917 D Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 859102..859917 Acidovorax ebreus TPSY 7383523 YP_002552307.1 CDS Dtpsy_0829 NC_011992.1 860011 861993 D KEGG: ajs:Ajs_0900 hypothetical protein; hypothetical protein 860011..861993 Acidovorax ebreus TPSY 7383524 YP_002552308.1 CDS Dtpsy_0830 NC_011992.1 861990 863063 D KEGG: ajs:Ajs_0901 A/G-specific DNA-adenine glycosylase; TIGRFAM: A/G-specific adenine glycosylase; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; A/G-specific adenine glycosylase MutY; SMART: HhH-GPD family protein; iron-sulfur cluster loop; A/G-specific adenine glycosylase 861990..863063 Acidovorax ebreus TPSY 7383525 YP_002552309.1 CDS Dtpsy_0831 NC_011992.1 863174 864037 R PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0902 hypothetical protein; hypothetical protein complement(863174..864037) Acidovorax ebreus TPSY 7383526 YP_002552310.1 CDS Dtpsy_0832 NC_011992.1 864041 865705 R TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: ajs:Ajs_0903 DNA repair protein RecN; DNA repair protein RecN complement(864041..865705) Acidovorax ebreus TPSY 7383527 YP_002552311.1 CDS ppnK NC_011992.1 865708 866604 R catalyzes the phosphorylation of NAD to NADP; NAD(+)/NADH kinase family protein complement(865708..866604) Acidovorax ebreus TPSY 7383528 YP_002552312.1 CDS Dtpsy_0834 NC_011992.1 866620 866883 R hypothetical protein complement(866620..866883) Acidovorax ebreus TPSY 7383529 YP_002552313.1 CDS Dtpsy_0835 NC_011992.1 867016 867369 D hypothetical protein 867016..867369 Acidovorax ebreus TPSY 7383530 YP_002552314.1 CDS Dtpsy_0836 NC_011992.1 867366 867755 D KEGG: aav:Aave_2389 hypothetical protein; hypothetical protein 867366..867755 Acidovorax ebreus TPSY 7383531 YP_002552315.1 CDS Dtpsy_0837 NC_011992.1 867752 868126 D hypothetical protein 867752..868126 Acidovorax ebreus TPSY 7383532 YP_002552316.1 CDS Dtpsy_0838 NC_011992.1 868126 869313 D hypothetical protein 868126..869313 Acidovorax ebreus TPSY 7383533 YP_002552317.1 CDS Dtpsy_0839 NC_011992.1 869324 869650 D hypothetical protein 869324..869650 Acidovorax ebreus TPSY 7383534 YP_002552318.1 CDS Dtpsy_0840 NC_011992.1 869867 870073 D hypothetical protein 869867..870073 Acidovorax ebreus TPSY 7383535 YP_002552319.1 CDS Dtpsy_0841 NC_011992.1 870077 870331 D KEGG: xcv:XCV2456 putative phage-related protein; putative phage-related protein 870077..870331 Acidovorax ebreus TPSY 7383536 YP_002552320.1 CDS Dtpsy_0842 NC_011992.1 870922 871842 D KEGG: rpi:Rpic_1393 hypothetical protein; hypothetical protein 870922..871842 Acidovorax ebreus TPSY 7383537 YP_002552321.1 CDS Dtpsy_0843 NC_011992.1 871845 872144 D KEGG: xfa:XF1869 hypothetical protein; hypothetical protein 871845..872144 Acidovorax ebreus TPSY 7383538 YP_002552322.1 CDS Dtpsy_0844 NC_011992.1 872141 873331 D PFAM: Zonular occludens toxin; KEGG: rpi:Rpic_1399 zonular occludens toxin; Zonular occludens toxin 872141..873331 Acidovorax ebreus TPSY 7383539 YP_002552323.1 CDS Dtpsy_0845 NC_011992.1 873328 873570 R hypothetical protein complement(873328..873570) Acidovorax ebreus TPSY 7383540 YP_002552324.1 CDS Dtpsy_0846 NC_011992.1 874365 874949 D PFAM: Resolvase domain; KEGG: aav:Aave_3594 resolvase, N-terminal domain; Resolvase domain protein 874365..874949 Acidovorax ebreus TPSY 7383541 YP_002552325.1 CDS hrcA NC_011992.1 874959 875963 D Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor 874959..875963 Acidovorax ebreus TPSY 7383542 YP_002552326.1 CDS Dtpsy_0848 NC_011992.1 876168 876398 D KEGG: xoo:XOO0599 phage integrase family site specific recombinase; hypothetical protein 876168..876398 Acidovorax ebreus TPSY 7383544 YP_002552327.1 CDS Dtpsy_0849 NC_011992.1 876370 876777 R PFAM: Endoribonuclease L-PSP; KEGG: psp:PSPPH_2438 translation initiation inhibitor; Endoribonuclease L-PSP complement(876370..876777) Acidovorax ebreus TPSY 7383545 YP_002552328.1 CDS Dtpsy_0850 NC_011992.1 876875 877807 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: psa:PST_1308 transcriptional regulator, LysR family; transcriptional regulator, LysR family 876875..877807 Acidovorax ebreus TPSY 7383546 YP_002552329.1 CDS Dtpsy_0851 NC_011992.1 877937 878560 D KEGG: ajs:Ajs_0916 hypothetical protein; hypothetical protein 877937..878560 Acidovorax ebreus TPSY 7383547 YP_002552330.1 CDS Dtpsy_0852 NC_011992.1 878822 879430 D KEGG: ajs:Ajs_0917 hypothetical protein; hypothetical protein 878822..879430 Acidovorax ebreus TPSY 7383548 YP_002552331.1 CDS Dtpsy_0853 NC_011992.1 879440 880024 D PFAM: isochorismatase hydrolase; KEGG: ajs:Ajs_0918 isochorismatase hydrolase; isochorismatase hydrolase 879440..880024 Acidovorax ebreus TPSY 7383549 YP_002552332.1 CDS Dtpsy_0854 NC_011992.1 880043 880510 D KEGG: ajs:Ajs_0919 hypothetical protein; hypothetical protein 880043..880510 Acidovorax ebreus TPSY 7383550 YP_002552333.1 CDS Dtpsy_0855 NC_011992.1 880600 880932 D KEGG: ajs:Ajs_0920 hypothetical protein; hypothetical protein 880600..880932 Acidovorax ebreus TPSY 7383551 YP_002552334.1 CDS Dtpsy_0856 NC_011992.1 881013 882257 R KEGG: ajs:Ajs_0921 putative oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase complement(881013..882257) Acidovorax ebreus TPSY 7383552 YP_002552335.1 CDS Dtpsy_0857 NC_011992.1 882350 882967 R HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; putative deoxyribonucleotide triphosphate pyrophosphatase complement(882350..882967) Acidovorax ebreus TPSY 7383553 YP_002552336.1 CDS Dtpsy_0858 NC_011992.1 883013 883747 R KEGG: ajs:Ajs_0923 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; ribonuclease PH complement(883013..883747) Acidovorax ebreus TPSY 7383554 YP_002552337.1 CDS Dtpsy_0859 NC_011992.1 883824 884726 R PFAM: Stage II sporulation E family protein; Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: ajs:Ajs_0924 protein phosphatase 2C domain-containing protein; protein serine/threonine phosphatase complement(883824..884726) Acidovorax ebreus TPSY 7383555 YP_002552338.1 CDS Dtpsy_0860 NC_011992.1 884723 885739 R PFAM: tyrosine protein kinase; Serine/threonine protein kinase-related; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: ajs:Ajs_0925 serine/threonine protein kinase; serine/threonine protein kinase complement(884723..885739) Acidovorax ebreus TPSY 7383556 YP_002552339.1 CDS Dtpsy_0861 NC_011992.1 885821 886729 D PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: ajs:Ajs_0926 hypothetical protein; hypothetical protein 885821..886729 Acidovorax ebreus TPSY 7383557 YP_002552340.1 CDS gmk NC_011992.1 886766 887386 D Essential for recycling GMP and indirectly, cGMP; guanylate kinase 886766..887386 Acidovorax ebreus TPSY 7383558 YP_002552341.1 CDS Dtpsy_0863 NC_011992.1 887402 887605 D Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 887402..887605 Acidovorax ebreus TPSY 7383559 YP_002552342.1 CDS Dtpsy_0864 NC_011992.1 887707 889971 D KEGG: ajs:Ajs_0949 (p)ppGpp synthetase I, SpoT/RelA; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase HD region; (p)ppGpp synthetase I, SpoT/RelA 887707..889971 Acidovorax ebreus TPSY 7383560 YP_002552343.1 CDS Dtpsy_0865 NC_011992.1 889985 890545 R TIGRFAM: transcription elongation factor GreB; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: ajs:Ajs_0950 transcription elongation factor GreB; transcription elongation factor GreB complement(889985..890545) Acidovorax ebreus TPSY 7383561 YP_002552344.1 CDS Dtpsy_0866 NC_011992.1 890847 891119 R KEGG: ajs:Ajs_0951 hypothetical protein; hypothetical protein complement(890847..891119) Acidovorax ebreus TPSY 7383563 YP_002552345.1 CDS rpsO NC_011992.1 891368 891634 D primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 891368..891634 Acidovorax ebreus TPSY 7383564 YP_002552346.1 CDS Dtpsy_0868 NC_011992.1 891850 894033 D KEGG: ajs:Ajs_0953 polynucleotide phosphorylase/polyadenylase; TIGRFAM: Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH type 1 domain protein; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; SMART: RNA binding S1 domain protein; KH domain protein; polynucleotide phosphorylase/polyadenylase 891850..894033 Acidovorax ebreus TPSY 7383565 YP_002552347.1 CDS Dtpsy_0869 NC_011992.1 894133 895137 D TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ajs:Ajs_0954 alcohol dehydrogenase; NAD(P)H quinone oxidoreductase, PIG3 family 894133..895137 Acidovorax ebreus TPSY 7383566 YP_002552348.1 CDS tpiA NC_011992.1 895134 895886 D Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 895134..895886 Acidovorax ebreus TPSY 7383567 YP_002552349.1 CDS Dtpsy_0871 NC_011992.1 895925 896305 D TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: ajs:Ajs_0956 protein translocase subunit SecG; preprotein translocase, SecG subunit 895925..896305 Acidovorax ebreus TPSY 7383568 YP_002552350.1 CDS Dtpsy_0872 NC_011992.1 896595 896954 D PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: ajs:Ajs_0957 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; NADH-ubiquinone/plastoquinone oxidoreductase chain 3 896595..896954 Acidovorax ebreus TPSY 7383570 YP_002552351.1 CDS Dtpsy_0873 NC_011992.1 896979 897458 D The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 896979..897458 Acidovorax ebreus TPSY 7383571 YP_002552352.1 CDS Dtpsy_0874 NC_011992.1 897469 898077 D KEGG: ajs:Ajs_0959 NADH (or F420H2) dehydrogenase, subunit C; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; NADH (or F420H2) dehydrogenase, subunit C 897469..898077 Acidovorax ebreus TPSY 7383572 YP_002552353.1 CDS Dtpsy_0875 NC_011992.1 898104 899357 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D 898104..899357 Acidovorax ebreus TPSY 7383573 YP_002552354.1 CDS Dtpsy_0876 NC_011992.1 899354 899845 D KEGG: ajs:Ajs_0961 NADH-quinone oxidoreductase, E subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; NADH-quinone oxidoreductase, E subunit 899354..899845 Acidovorax ebreus TPSY 7383574 YP_002552355.1 CDS Dtpsy_0877 NC_011992.1 899842 901203 D KEGG: ajs:Ajs_0962 NADH-quinone oxidoreductase, F subunit; TIGRFAM: NADH-quinone oxidoreductase, F subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH-quinone oxidoreductase, F subunit 899842..901203 Acidovorax ebreus TPSY 7383575 YP_002552356.1 CDS Dtpsy_0878 NC_011992.1 901219 903351 D Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit G 901219..903351 Acidovorax ebreus TPSY 7383576 YP_002552357.1 CDS Dtpsy_0879 NC_011992.1 903348 904424 D PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: ajs:Ajs_0964 respiratory-chain NADH dehydrogenase, subunit 1; NADH dehydrogenase (quinone) 903348..904424 Acidovorax ebreus TPSY 7383577 YP_002552358.1 CDS Dtpsy_0880 NC_011992.1 904437 904949 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 904437..904949 Acidovorax ebreus TPSY 7383578 YP_002552359.1 CDS Dtpsy_0881 NC_011992.1 904994 905659 D PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: ajs:Ajs_0966 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; NADH-ubiquinone/plastoquinone oxidoreductase chain 6 904994..905659 Acidovorax ebreus TPSY 7383579 YP_002552360.1 CDS Dtpsy_0882 NC_011992.1 905656 905964 D PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: ajs:Ajs_0967 NADH-ubiquinone oxidoreductase, chain 4L; NADH-ubiquinone oxidoreductase chain 4L 905656..905964 Acidovorax ebreus TPSY 7383580 YP_002552361.1 CDS Dtpsy_0883 NC_011992.1 905998 908013 D KEGG: aav:Aave_1274 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase, chain L 905998..908013 Acidovorax ebreus TPSY 7383581 YP_002552362.1 CDS Dtpsy_0884 NC_011992.1 908027 909502 D KEGG: ajs:Ajs_0969 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase, chain M 908027..909502 Acidovorax ebreus TPSY 7383582 YP_002552363.1 CDS Dtpsy_0885 NC_011992.1 909527 911020 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N 909527..911020 Acidovorax ebreus TPSY 7383583 YP_002552364.1 CDS Dtpsy_0886 NC_011992.1 911039 911362 D KEGG: ajs:Ajs_0971 putative transmembrane protein; putative transmembrane protein 911039..911362 Acidovorax ebreus TPSY 7385079 YP_002552365.1 CDS Dtpsy_0887 NC_011992.1 911369 911836 D PFAM: protein of unknown function DUF1178; KEGG: ajs:Ajs_0972 hypothetical protein; protein of unknown function DUF1178 911369..911836 Acidovorax ebreus TPSY 7384390 YP_002552366.1 CDS Dtpsy_0888 NC_011992.1 911888 913690 R PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_0973 ABC transporter related; ABC transporter related complement(911888..913690) Acidovorax ebreus TPSY 7384391 YP_002552367.1 CDS Dtpsy_0889 NC_011992.1 913721 914089 R KEGG: ajs:Ajs_0974 hypothetical protein; hypothetical protein complement(913721..914089) Acidovorax ebreus TPSY 7384392 YP_002552368.1 CDS Dtpsy_0890 NC_011992.1 914138 914794 D PFAM: ABC transporter related; KEGG: ajs:Ajs_0975 ABC-type transport system involved in cytochrome c biogenesis ATPase component-like protein; ABC transporter related 914138..914794 Acidovorax ebreus TPSY 7384393 YP_002552369.1 CDS Dtpsy_0891 NC_011992.1 914838 915467 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: ajs:Ajs_0976 lysine exporter protein LysE/YggA; Lysine exporter protein (LYSE/YGGA) 914838..915467 Acidovorax ebreus TPSY 7384394 YP_002552370.1 CDS Dtpsy_0892 NC_011992.1 915532 916875 R converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; glutamate dehydrogenase complement(915532..916875) Acidovorax ebreus TPSY 7384395 YP_002552371.1 CDS Dtpsy_0893 NC_011992.1 917207 919180 R TIGRFAM: DNA mismatch repair protein MutL; PFAM: ATP-binding region ATPase domain protein; DNA mismatch repair protein domain protein; MutL dimerisation; KEGG: ajs:Ajs_0978 DNA mismatch repair protein MutL; DNA mismatch repair protein MutL complement(917207..919180) Acidovorax ebreus TPSY 7384396 YP_002552372.1 CDS Dtpsy_0894 NC_011992.1 919224 919475 R PFAM: 17 kDa surface antigen; KEGG: ajs:Ajs_0979 17 kDa surface antigen; 17 kDa surface antigen complement(919224..919475) Acidovorax ebreus TPSY 7384397 YP_002552373.1 CDS Dtpsy_0895 NC_011992.1 919689 920351 D PFAM: SNARE associated Golgi protein; KEGG: ajs:Ajs_0980 DedA protein (DSG-1 protein); SNARE associated Golgi protein 919689..920351 Acidovorax ebreus TPSY 7384398 YP_002552374.1 CDS Dtpsy_0896 NC_011992.1 920460 920690 R PFAM: 17 kDa surface antigen; KEGG: ajs:Ajs_0979 17 kDa surface antigen; 17 kDa surface antigen complement(920460..920690) Acidovorax ebreus TPSY 7384399 YP_002552375.1 CDS Dtpsy_0897 NC_011992.1 920811 921143 R PFAM: Cupin 2 conserved barrel domain protein; KEGG: ajs:Ajs_0982 cupin 2 domain-containing protein; Cupin 2 conserved barrel domain protein complement(920811..921143) Acidovorax ebreus TPSY 7384400 YP_002552376.1 CDS Dtpsy_0898 NC_011992.1 921164 922615 R KEGG: ajs:Ajs_0983 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; N-acetylmuramoyl-L-alanine amidase complement(921164..922615) Acidovorax ebreus TPSY 7384401 YP_002552377.1 CDS Dtpsy_0899 NC_011992.1 922612 923121 R PFAM: protein of unknown function UPF0079; KEGG: dac:Daci_5126 hypothetical protein; protein of unknown function UPF0079 complement(922612..923121) Acidovorax ebreus TPSY 7384402 YP_002552378.1 CDS Dtpsy_0900 NC_011992.1 923104 924186 D TIGRFAM: iron-sulfur cluster binding protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; domain of unknown function DUF1730; KEGG: ajs:Ajs_0985 putative iron-sulfur cluster binding protein; iron-sulfur cluster binding protein 923104..924186 Acidovorax ebreus TPSY 7384403 YP_002552379.1 CDS Dtpsy_0901 NC_011992.1 924245 925162 R PFAM: Auxin Efflux Carrier; KEGG: ajs:Ajs_0986 auxin efflux carrier; Auxin Efflux Carrier complement(924245..925162) Acidovorax ebreus TPSY 7384404 YP_002552380.1 CDS Dtpsy_0902 NC_011992.1 925315 926277 D PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0987 hypothetical protein; hypothetical protein 925315..926277 Acidovorax ebreus TPSY 7384405 YP_002552381.1 CDS Dtpsy_0903 NC_011992.1 926334 927245 D TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: ajs:Ajs_0988 tyrosine recombinase XerD; tyrosine recombinase XerD 926334..927245 Acidovorax ebreus TPSY 7384406 YP_002552382.1 CDS Dtpsy_0904 NC_011992.1 927325 928302 D PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0989 hypothetical protein; hypothetical protein 927325..928302 Acidovorax ebreus TPSY 7384407 YP_002552383.1 CDS Dtpsy_0905 NC_011992.1 928353 929648 R PFAM: EAL domain protein; Metal-dependent hydrolase HDOD; SMART: EAL domain protein; KEGG: ajs:Ajs_0990 diguanylate phosphodiesterase; diguanylate phosphodiesterase complement(928353..929648) Acidovorax ebreus TPSY 7384408 YP_002552384.1 CDS Dtpsy_0906 NC_011992.1 929699 930970 R PFAM: EAL domain protein; Metal-dependent hydrolase HDOD; SMART: EAL domain protein; KEGG: ajs:Ajs_0991 diguanylate phosphodiesterase; diguanylate phosphodiesterase complement(929699..930970) Acidovorax ebreus TPSY 7384409 YP_002552385.1 CDS Dtpsy_0907 NC_011992.1 931117 931923 R PFAM: protein of unknown function DUF455; KEGG: ajs:Ajs_0992 hypothetical protein; protein of unknown function DUF455 complement(931117..931923) Acidovorax ebreus TPSY 7384410 YP_002552386.1 CDS Dtpsy_0908 NC_011992.1 931973 932497 D KEGG: ajs:Ajs_0993 transferase hexapeptide protein; transferase hexapeptide protein 931973..932497 Acidovorax ebreus TPSY 7384411 YP_002552387.1 CDS Dtpsy_0909 NC_011992.1 932509 933516 D PFAM: Hsp33 protein; KEGG: ajs:Ajs_0994 HSP33 protein; Hsp33 protein 932509..933516 Acidovorax ebreus TPSY 7384412 YP_002552388.1 CDS Dtpsy_0910 NC_011992.1 933609 934037 R KEGG: ajs:Ajs_0995 hypothetical protein; hypothetical protein complement(933609..934037) Acidovorax ebreus TPSY 7384413 YP_002552389.1 CDS Dtpsy_0911 NC_011992.1 934070 934354 R PFAM: Septum formation initiator; KEGG: ajs:Ajs_0996 cell division protein FtsB; Septum formation initiator complement(934070..934354) Acidovorax ebreus TPSY 7384414 YP_002552390.1 CDS eno NC_011992.1 934381 935667 R enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase complement(934381..935667) Acidovorax ebreus TPSY 7384415 YP_002552391.1 CDS Dtpsy_0913 NC_011992.1 935751 936041 R PFAM: protein of unknown function DUF1330; KEGG: dac:Daci_5107 hypothetical protein; protein of unknown function DUF1330 complement(935751..936041) Acidovorax ebreus TPSY 7384416 YP_002552392.1 CDS Dtpsy_0914 NC_011992.1 936046 936903 R catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase complement(936046..936903) Acidovorax ebreus TPSY 7384417 YP_002552393.1 CDS pyrG NC_011992.1 936919 938577 R CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase complement(936919..938577) Acidovorax ebreus TPSY 7384418 YP_002552394.1 CDS Dtpsy_0916 NC_011992.1 938669 939889 D KEGG: ajs:Ajs_1001 phosphopantothenate-cysteine ligase / phosphopantothenoylcysteine decarboxylase; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein; phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase 938669..939889 Acidovorax ebreus TPSY 7384419 YP_002552395.1 CDS dut NC_011992.1 939987 940433 D catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 939987..940433 Acidovorax ebreus TPSY 7384420 YP_002552396.1 CDS Dtpsy_0918 NC_011992.1 940599 941096 D PFAM: 17 kDa surface antigen; KEGG: ajs:Ajs_1003 17 kDa surface antigen; 17 kDa surface antigen 940599..941096 Acidovorax ebreus TPSY 7384421 YP_002552397.1 CDS Dtpsy_0919 NC_011992.1 941190 941714 R KEGG: ajs:Ajs_1004 fkbp-type peptidyl-prolyl cis-trans isomerase; fkbp-type peptidyl-prolyl cis-trans isomerase complement(941190..941714) Acidovorax ebreus TPSY 7384422 YP_002552398.1 CDS Dtpsy_0920 NC_011992.1 941768 942889 D PFAM: Cupin 4 family protein; SMART: transcription factor jumonji jmjC domain protein; KEGG: ajs:Ajs_1005 cupin 4 family protein; Cupin 4 family protein 941768..942889 Acidovorax ebreus TPSY 7384423 YP_002552399.1 CDS Dtpsy_0921 NC_011992.1 942913 943425 D KEGG: ajs:Ajs_1006 hypothetical protein; hypothetical protein 942913..943425 Acidovorax ebreus TPSY 7384424 YP_002552400.1 CDS Dtpsy_0922 NC_011992.1 943975 944757 R PFAM: beta-lactamase domain protein; KEGG: ajs:Ajs_1008 beta-lactamase domain-containing protein; beta-lactamase domain protein complement(943975..944757) Acidovorax ebreus TPSY 7384425 YP_002552401.1 CDS Dtpsy_0923 NC_011992.1 944791 945879 R PFAM: NlpBDapX family lipoprotein; KEGG: ajs:Ajs_1009 NlpB/DapX family lipoprotein; NlpBDapX family lipoprotein complement(944791..945879) Acidovorax ebreus TPSY 7384426 YP_002552402.1 CDS Dtpsy_0924 NC_011992.1 945963 946859 R catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase complement(945963..946859) Acidovorax ebreus TPSY 7384427 YP_002552403.1 CDS Dtpsy_0925 NC_011992.1 946894 947466 R KEGG: ajs:Ajs_1011 methyltransferase type 12; methyltransferase type 12 complement(946894..947466) Acidovorax ebreus TPSY 7384428 YP_002552404.1 CDS Dtpsy_0926 NC_011992.1 947469 947597 R KEGG: ajs:Ajs_1012 hypothetical protein; hypothetical protein complement(947469..947597) Acidovorax ebreus TPSY 7384429 YP_002552405.1 CDS Dtpsy_0927 NC_011992.1 947600 948817 R PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_1013 major facilitator superfamily transporter; major facilitator superfamily MFS_1 complement(947600..948817) Acidovorax ebreus TPSY 7384430 YP_002552406.1 CDS Dtpsy_0928 NC_011992.1 948933 950915 D decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 948933..950915 Acidovorax ebreus TPSY 7384431 YP_002552407.1 CDS Dtpsy_0929 NC_011992.1 950930 951832 D PFAM: Lytic transglycosylase catalytic; KEGG: ajs:Ajs_1015 lytic transglycosylase, catalytic; Lytic transglycosylase catalytic 950930..951832 Acidovorax ebreus TPSY 7384432 YP_002552408.1 CDS Dtpsy_0930 NC_011992.1 951829 954183 D decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 951829..954183 Acidovorax ebreus TPSY 7384433 YP_002552409.1 CDS Dtpsy_0931 NC_011992.1 954376 956151 D PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; SMART: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: ajs:Ajs_1017 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 954376..956151 Acidovorax ebreus TPSY 7384434 YP_002552410.1 CDS Dtpsy_0932 NC_011992.1 956285 956743 R PFAM: Endoribonuclease L-PSP; KEGG: ajs:Ajs_1018 endoribonuclease L-PSP; Endoribonuclease L-PSP complement(956285..956743) Acidovorax ebreus TPSY 7384435 YP_002552411.1 CDS Dtpsy_0933 NC_011992.1 956886 959471 D TIGRFAM: ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2; PFAM: beta-lactamase domain protein; ComEC/Rec2-related protein; KEGG: vei:Veis_0403 DNA internalization-related competence protein ComEC/Rec2; DNA internalization-related competence protein ComEC/Rec2 956886..959471 Acidovorax ebreus TPSY 7384436 YP_002552412.1 CDS Dtpsy_0934 NC_011992.1 959520 960983 D PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: ajs:Ajs_1020 hypothetical protein; protein of unknown function DUF404 959520..960983 Acidovorax ebreus TPSY 7384437 YP_002552413.1 CDS Dtpsy_0935 NC_011992.1 960985 961140 D KEGG: ajs:Ajs_1021 hypothetical protein; hypothetical protein 960985..961140 Acidovorax ebreus TPSY 7384438 YP_002552414.1 CDS Dtpsy_0936 NC_011992.1 961134 962102 D PFAM: protein of unknown function DUF403; KEGG: ajs:Ajs_1021 hypothetical protein; protein of unknown function DUF403 961134..962102 Acidovorax ebreus TPSY 7384439 YP_002552415.1 CDS Dtpsy_0937 NC_011992.1 962136 962513 R KEGG: ajs:Ajs_1022 hypothetical protein; hypothetical protein complement(962136..962513) Acidovorax ebreus TPSY 7384440 YP_002552416.1 CDS Dtpsy_0938 NC_011992.1 962666 962938 R KEGG: ajs:Ajs_1023 hypothetical protein; hypothetical protein complement(962666..962938) Acidovorax ebreus TPSY 7384441 YP_002552417.1 CDS Dtpsy_0939 NC_011992.1 963048 963962 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_1024 LysR family transcriptional regulator; transcriptional regulator, LysR family complement(963048..963962) Acidovorax ebreus TPSY 7384442 YP_002552418.1 CDS Dtpsy_0940 NC_011992.1 964128 964967 D PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: aav:Aave_1361 alpha/beta hydrolase fold-3 domain protein; Alpha/beta hydrolase fold-3 domain protein 964128..964967 Acidovorax ebreus TPSY 7384443 YP_002552419.1 CDS Dtpsy_0941 NC_011992.1 965192 966451 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: aav:Aave_1362 efflux transporter, RND family, MFP subunit; efflux transporter, RND family, MFP subunit 965192..966451 Acidovorax ebreus TPSY 7384444 YP_002552420.1 CDS Dtpsy_0942 NC_011992.1 966480 969713 D TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: aav:Aave_1363 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 966480..969713 Acidovorax ebreus TPSY 7384445 YP_002552421.1 CDS Dtpsy_0943 NC_011992.1 969710 971164 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: aav:Aave_1364 RND efflux system, outer membrane lipoprotein, NodT family; RND efflux system, outer membrane lipoprotein, NodT family 969710..971164 Acidovorax ebreus TPSY 7384446 YP_002552422.1 CDS Dtpsy_0944 NC_011992.1 971299 972735 D PFAM: Aldehyde Dehydrogenase; KEGG: ajs:Ajs_1026 2,5-dioxopentanoate dehydrogenase (NAD+); Aldehyde Dehydrogenase 971299..972735 Acidovorax ebreus TPSY 7384447 YP_002552423.1 CDS Dtpsy_0945 NC_011992.1 972791 974944 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ajs:Ajs_1027 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor complement(972791..974944) Acidovorax ebreus TPSY 7384448 YP_002552424.1 CDS Dtpsy_0946 NC_011992.1 975019 977166 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ajs:Ajs_1028 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor complement(975019..977166) Acidovorax ebreus TPSY 7384449 YP_002552425.1 CDS Dtpsy_0947 NC_011992.1 977199 977924 R KEGG: ajs:Ajs_1029 hypothetical protein; hypothetical protein complement(977199..977924) Acidovorax ebreus TPSY 7384450 YP_002552426.1 CDS Dtpsy_0948 NC_011992.1 978190 978543 R KEGG: ajs:Ajs_1030 hypothetical protein; hypothetical protein complement(978190..978543) Acidovorax ebreus TPSY 7384451 YP_002552427.1 CDS Dtpsy_0949 NC_011992.1 978545 980227 R PFAM: PepSY-associated TM helix domain protein; KEGG: ajs:Ajs_1031 PepSY-associated TM helix domain-containing protein; PepSY-associated TM helix domain protein complement(978545..980227) Acidovorax ebreus TPSY 7384452 YP_002552428.1 CDS Dtpsy_0950 NC_011992.1 980224 980532 R KEGG: ajs:Ajs_1032 putative iron uptake protein; putative iron uptake protein complement(980224..980532) Acidovorax ebreus TPSY 7384453 YP_002552429.1 CDS Dtpsy_0951 NC_011992.1 980856 981755 R KEGG: ajs:Ajs_1033 3-mercaptopyruvate sulfurtransferase; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; 3-mercaptopyruvate sulfurtransferase complement(980856..981755) Acidovorax ebreus TPSY 7384454 YP_002552430.1 CDS Dtpsy_0952 NC_011992.1 981816 982727 R KEGG: ajs:Ajs_1034 putative transmembrane protein; putative transmembrane protein complement(981816..982727) Acidovorax ebreus TPSY 7384455 YP_002552431.1 CDS Dtpsy_0953 NC_011992.1 982825 983964 R PFAM: Rieske [2Fe-2S] domain protein; KEGG: ajs:Ajs_1035 Rieske (2Fe-2S) domain-containing protein; Rieske (2Fe-2S) domain protein complement(982825..983964) Acidovorax ebreus TPSY 7384456 YP_002552432.1 CDS Dtpsy_0954 NC_011992.1 984271 984516 D TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit; KEGG: ajs:Ajs_1036 exodeoxyribonuclease VII, small subunit; exodeoxyribonuclease VII, small subunit 984271..984516 Acidovorax ebreus TPSY 7384457 YP_002552433.1 CDS Dtpsy_0955 NC_011992.1 984501 985421 D PFAM: Polyprenyl synthetase; KEGG: ajs:Ajs_1037 farnesyl-diphosphate synthase; Polyprenyl synthetase 984501..985421 Acidovorax ebreus TPSY 7384458 YP_002552434.1 CDS Dtpsy_0956 NC_011992.1 985525 987414 D catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 985525..987414 Acidovorax ebreus TPSY 7384459 YP_002552435.1 CDS Dtpsy_0957 NC_011992.1 987688 988770 D PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: ajs:Ajs_1039 TRAP dicarboxylate transporter-DctP subunit; TRAP dicarboxylate transporter- DctP subunit 987688..988770 Acidovorax ebreus TPSY 7384460 YP_002552436.1 CDS Dtpsy_0958 NC_011992.1 988910 990736 R TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: ajs:Ajs_1040 TRAP dicarboxylate transporter, DctM subunit; TRAP dicarboxylate transporter, DctM subunit complement(988910..990736) Acidovorax ebreus TPSY 7384461 YP_002552437.1 CDS Dtpsy_0959 NC_011992.1 990758 991384 R PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: ajs:Ajs_1041 tripartite ATP-independent periplasmic transporter DctQ; Tripartite ATP-independent periplasmic transporter DctQ component complement(990758..991384) Acidovorax ebreus TPSY 7384462 YP_002552438.1 CDS Dtpsy_0960 NC_011992.1 991711 993582 R KEGG: ajs:Ajs_1042 gamma-glutamyltransferase 1; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase complement(991711..993582) Acidovorax ebreus TPSY 7384463 YP_002552439.1 CDS Dtpsy_0961 NC_011992.1 993876 998711 D KEGG: aav:Aave_2063 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; multi-sensor hybrid histidine kinase 993876..998711 Acidovorax ebreus TPSY 7384464 YP_002552440.1 CDS Dtpsy_0962 NC_011992.1 998747 999880 D PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: response regulator receiver; metal-dependent phosphohydrolase HD region; KEGG: ajs:Ajs_1044 response regulator receiver modulated metal dependent phosphohydrolase; response regulator receiver modulated metal dependent phosphohydrolase 998747..999880 Acidovorax ebreus TPSY 7384465 YP_002552441.1 CDS Dtpsy_0963 NC_011992.1 999963 1000931 R PFAM: inositol monophosphatase; KEGG: ajs:Ajs_1045 inositol-phosphate phosphatase; Inositol-phosphate phosphatase complement(999963..1000931) Acidovorax ebreus TPSY 7384466 YP_002552442.1 CDS Dtpsy_0964 NC_011992.1 1001102 1001896 D TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: ajs:Ajs_1046 RNA methyltransferase; RNA methyltransferase, TrmH family, group 1 1001102..1001896 Acidovorax ebreus TPSY 7384467 YP_002552443.1 CDS Dtpsy_0965 NC_011992.1 1001930 1002721 D TIGRFAM: serine O-acetyltransferase; KEGG: ajs:Ajs_1047 serine O-acetyltransferase; serine O-acetyltransferase 1001930..1002721 Acidovorax ebreus TPSY 7384468 YP_002552444.1 CDS Dtpsy_0966 NC_011992.1 1002729 1003388 D PFAM: nitroreductase; KEGG: ajs:Ajs_1048 nitroreductase; nitroreductase 1002729..1003388 Acidovorax ebreus TPSY 7384469 YP_002552445.1 CDS Dtpsy_0967 NC_011992.1 1003506 1004606 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ajs:Ajs_1049 alcohol dehydrogenase; Alcohol dehydrogenase zinc-binding domain protein complement(1003506..1004606) Acidovorax ebreus TPSY 7384470 YP_002552446.1 CDS Dtpsy_0968 NC_011992.1 1004664 1006310 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; sulphate transporter; KEGG: ajs:Ajs_1050 sulphate transporter; sulphate transporter complement(1004664..1006310) Acidovorax ebreus TPSY 7384634 YP_002552447.1 CDS Dtpsy_0969 NC_011992.1 1006339 1006947 R TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; KEGG: ajs:Ajs_1051 molybdopterin adenylyltransferase; molybdenum cofactor synthesis domain protein complement(1006339..1006947) Acidovorax ebreus TPSY 7382286 YP_002552448.1 CDS Dtpsy_0970 NC_011992.1 1006940 1007602 R PFAM: protein of unknown function DUF615; KEGG: ajs:Ajs_1052 hypothetical protein; protein of unknown function DUF615 complement(1006940..1007602) Acidovorax ebreus TPSY 7382287 YP_002552449.1 CDS Dtpsy_0971 NC_011992.1 1007698 1009107 D PFAM: peptidase U62 modulator of DNA gyrase; KEGG: ajs:Ajs_1053 microcin-processing peptidase 1; peptidase U62 modulator of DNA gyrase 1007698..1009107 Acidovorax ebreus TPSY 7382288 YP_002552450.1 CDS Dtpsy_0972 NC_011992.1 1009133 1010053 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: ajs:Ajs_1054 hypothetical protein; protein of unknown function DUF6 transmembrane 1009133..1010053 Acidovorax ebreus TPSY 7382289 YP_002552451.1 CDS Dtpsy_0973 NC_011992.1 1010138 1011154 R KEGG: ajs:Ajs_1055 hypothetical protein; hypothetical protein complement(1010138..1011154) Acidovorax ebreus TPSY 7382290 YP_002552452.1 CDS Dtpsy_0974 NC_011992.1 1011298 1012857 R TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: ajs:Ajs_1056 fumarase; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit complement(1011298..1012857) Acidovorax ebreus TPSY 7382291 YP_002552453.1 CDS fumC NC_011992.1 1013057 1014448 D class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 1013057..1014448 Acidovorax ebreus TPSY 7382292 YP_002552454.1 CDS Dtpsy_0976 NC_011992.1 1014493 1015269 R PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: ajs:Ajs_1058 CRP/FNR family transcriptional regulator; transcriptional regulator, Crp/Fnr family complement(1014493..1015269) Acidovorax ebreus TPSY 7382293 YP_002552455.1 CDS Dtpsy_0977 NC_011992.1 1015459 1016187 R PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: ajs:Ajs_1059 two component transcriptional regulator; two component transcriptional regulator, winged helix family complement(1015459..1016187) Acidovorax ebreus TPSY 7382294 YP_002552456.1 CDS Dtpsy_0978 NC_011992.1 1016184 1017671 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ajs:Ajs_1060 integral membrane sensor signal transduction histidine kinase; histidine kinase complement(1016184..1017671) Acidovorax ebreus TPSY 7382295 YP_002552457.1 CDS proX NC_011992.1 1017914 1018993 R with ProVW, part of the high-affinity transport system for the osmoprotectant glycine betaine; glycine betaine transporter periplasmic subunit complement(1017914..1018993) Acidovorax ebreus TPSY 7382296 YP_002552458.1 CDS Dtpsy_0980 NC_011992.1 1019030 1020232 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_1064 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component complement(1019030..1020232) Acidovorax ebreus TPSY 7382297 YP_002552459.1 CDS Dtpsy_0981 NC_011992.1 1020257 1021546 R KEGG: ajs:Ajs_1065 glycine betaine/L-proline ABC transporter, ATPase subunit; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase; glycine betaine/L-proline ABC transporter, ATPase subunit complement(1020257..1021546) Acidovorax ebreus TPSY 7382298 YP_002552460.1 CDS Dtpsy_0982 NC_011992.1 1022201 1022782 R PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_1066 hypothetical protein; hypothetical protein complement(1022201..1022782) Acidovorax ebreus TPSY 7382299 YP_002552461.1 CDS Dtpsy_0983 NC_011992.1 1023018 1025015 D TIGRFAM: acetate/CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_1067 acetyl-coenzyme A synthetase; acetate/CoA ligase 1023018..1025015 Acidovorax ebreus TPSY 7382300 YP_002552462.1 CDS Dtpsy_0984 NC_011992.1 1025610 1026119 D KEGG: ajs:Ajs_1068 hypothetical protein; hypothetical protein 1025610..1026119 Acidovorax ebreus TPSY 7382301 YP_002552463.1 CDS Dtpsy_0985 NC_011992.1 1026207 1026512 R PFAM: cytochrome c class I; KEGG: ajs:Ajs_1069 cytochrome c, class I; cytochrome c class I complement(1026207..1026512) Acidovorax ebreus TPSY 7382302 YP_002552464.1 CDS Dtpsy_0986 NC_011992.1 1026621 1026863 D KEGG: ajs:Ajs_1070 hypothetical protein; hypothetical protein 1026621..1026863 Acidovorax ebreus TPSY 7382303 YP_002552465.1 CDS Dtpsy_0987 NC_011992.1 1026996 1028690 R catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase complement(1026996..1028690) Acidovorax ebreus TPSY 7382304 YP_002552466.1 CDS Dtpsy_0988 NC_011992.1 1028920 1030776 D catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 1028920..1030776 Acidovorax ebreus TPSY 7382305 YP_002552467.1 CDS Dtpsy_0989 NC_011992.1 1030931 1031359 D PFAM: thioesterase superfamily protein; KEGG: ajs:Ajs_1073 hypothetical protein; thioesterase superfamily protein 1030931..1031359 Acidovorax ebreus TPSY 7382306 YP_002552468.1 CDS Dtpsy_0990 NC_011992.1 1031373 1031855 R TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein; KEGG: ajs:Ajs_1074 bacterioferritin; bacterioferritin complement(1031373..1031855) Acidovorax ebreus TPSY 7382307 YP_002552469.1 CDS Dtpsy_0991 NC_011992.1 1032028 1032861 D transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 1032028..1032861 Acidovorax ebreus TPSY 7382308 YP_002552470.1 CDS Dtpsy_0992 NC_011992.1 1033097 1033768 D PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH; KEGG: ajs:Ajs_1076 GntR family transcriptional regulator; transcriptional regulator, GntR family 1033097..1033768 Acidovorax ebreus TPSY 7382309 YP_002552471.1 CDS Dtpsy_0993 NC_011992.1 1033765 1035231 D PFAM: Malonyl-CoA decarboxylase; KEGG: ajs:Ajs_1077 malonyl-CoA decarboxylase; Malonyl-CoA decarboxylase 1033765..1035231 Acidovorax ebreus TPSY 7382310 YP_002552472.1 CDS Dtpsy_0994 NC_011992.1 1035378 1036403 D PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_1078 hypothetical protein; hypothetical protein 1035378..1036403 Acidovorax ebreus TPSY 7382311 YP_002552473.1 CDS Dtpsy_0995 NC_011992.1 1036495 1037298 D PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ajs:Ajs_1079 enoyl-CoA hydratase/isomerase; Enoyl-CoA hydratase/isomerase 1036495..1037298 Acidovorax ebreus TPSY 7382312 YP_002552474.1 CDS Dtpsy_0996 NC_011992.1 1037320 1038879 D catalyzes the formation of malonyl-CoA from malonate and CoA; malonyl-CoA synthase 1037320..1038879 Acidovorax ebreus TPSY 7382313 YP_002552475.1 CDS Dtpsy_0997 NC_011992.1 1038985 1039428 R PFAM: UspA domain protein; KEGG: ajs:Ajs_1081 UspA domain-containing protein; UspA domain protein complement(1038985..1039428) Acidovorax ebreus TPSY 7382314 YP_002552476.1 CDS Dtpsy_0998 NC_011992.1 1039537 1041945 D TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: ajs:Ajs_1082 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase 1039537..1041945 Acidovorax ebreus TPSY 7382315 YP_002552477.1 CDS Dtpsy_0999 NC_011992.1 1041947 1042084 D TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type; KEGG: ajs:Ajs_1083 cytochrome oxidase maturation protein, cbb3-type; cytochrome oxidase maturation protein, cbb3-type 1041947..1042084 Acidovorax ebreus TPSY 7382316 YP_002552478.1 CDS Dtpsy_1000 NC_011992.1 1042150 1043589 D CcoN; FixN; cbb3-type cytochrome c oxidase subunit I 1042150..1043589 Acidovorax ebreus TPSY 7382317 YP_002552479.1 CDS Dtpsy_1001 NC_011992.1 1043609 1044241 D CcoO; FixO; cbb3-type cytochrome c oxidase subunit II 1043609..1044241 Acidovorax ebreus TPSY 7382318 YP_002552480.1 CDS Dtpsy_1002 NC_011992.1 1044256 1044393 D PFAM: Cbb3-type cytochrome oxidase component; KEGG: ajs:Ajs_1086 Cbb3-type cytochrome oxidase component; Cbb3-type cytochrome oxidase component 1044256..1044393 Acidovorax ebreus TPSY 7382319 YP_002552481.1 CDS Dtpsy_1003 NC_011992.1 1044423 1045337 D TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; PFAM: cytochrome c class I; KEGG: ajs:Ajs_1087 cytochrome c oxidase, cbb3-type, subunit III; cytochrome c oxidase, cbb3-type, subunit III 1044423..1045337 Acidovorax ebreus TPSY 7382320 YP_002552482.1 CDS Dtpsy_1004 NC_011992.1 1045422 1046864 D TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: ajs:Ajs_1088 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; cytochrome c oxidase accessory protein CcoG 1045422..1046864 Acidovorax ebreus TPSY 7382321 YP_002552483.1 CDS Dtpsy_1005 NC_011992.1 1046926 1047204 D KEGG: ajs:Ajs_1089 hypothetical protein; hypothetical protein 1046926..1047204 Acidovorax ebreus TPSY 7382322 YP_002552484.1 CDS Dtpsy_1006 NC_011992.1 1047281 1047568 D KEGG: ajs:Ajs_1090 hypothetical protein; hypothetical protein 1047281..1047568 Acidovorax ebreus TPSY 7382323 YP_002552485.1 CDS Dtpsy_1007 NC_011992.1 1047610 1048338 R PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: ajs:Ajs_1091 CRP/FNR family transcriptional regulator; transcriptional regulator, Crp/Fnr family complement(1047610..1048338) Acidovorax ebreus TPSY 7382324 YP_002552486.1 CDS Dtpsy_1008 NC_011992.1 1048525 1049907 D catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 1048525..1049907 Acidovorax ebreus TPSY 7382325 YP_002552487.1 CDS Dtpsy_1009 NC_011992.1 1049911 1050630 D KEGG: ajs:Ajs_1093 hypothetical protein; hypothetical protein 1049911..1050630 Acidovorax ebreus TPSY 7382326 YP_002552488.1 CDS Dtpsy_1010 NC_011992.1 1051271 1051615 R PFAM: protein of unknown function DUF710; KEGG: ajs:Ajs_1094 cell division protein ZapA; protein of unknown function DUF710 complement(1051271..1051615) Acidovorax ebreus TPSY 7382328 YP_002552489.1 CDS Dtpsy_1011 NC_011992.1 1051612 1051851 R KEGG: ajs:Ajs_1095 hypothetical protein; hypothetical protein complement(1051612..1051851) Acidovorax ebreus TPSY 7382329 YP_002552490.1 CDS Dtpsy_1012 NC_011992.1 1052210 1054090 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ajs:Ajs_1096 TonB-dependent receptor; TonB-dependent receptor 1052210..1054090 Acidovorax ebreus TPSY 7382330 YP_002552491.1 CDS Dtpsy_1013 NC_011992.1 1054113 1055471 D PFAM: Cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: ajs:Ajs_1097 hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) / cobyrinate a,c-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase 1054113..1055471 Acidovorax ebreus TPSY 7382331 YP_002552492.1 CDS Dtpsy_1014 NC_011992.1 1055468 1056067 D PFAM: cobalbumin biosynthesis protein; KEGG: ajs:Ajs_1098 adenosylcobinamide kinase; cobalbumin biosynthesis protein 1055468..1056067 Acidovorax ebreus TPSY 7382332 YP_002552493.1 CDS Dtpsy_1015 NC_011992.1 1056064 1056954 D PFAM: periplasmic binding protein; KEGG: ajs:Ajs_1099 periplasmic binding protein; periplasmic binding protein 1056064..1056954 Acidovorax ebreus TPSY 7382333 YP_002552494.1 CDS Dtpsy_1016 NC_011992.1 1056951 1058033 D PFAM: transport system permease protein; KEGG: ajs:Ajs_1100 transport system permease protein; transport system permease protein 1056951..1058033 Acidovorax ebreus TPSY 7382334 YP_002552495.1 CDS Dtpsy_1017 NC_011992.1 1058030 1058812 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_1101 ABC transporter related; ABC transporter related 1058030..1058812 Acidovorax ebreus TPSY 7382335 YP_002552496.1 CDS Dtpsy_1018 NC_011992.1 1059173 1059742 D KEGG: ajs:Ajs_1102 cob(I)yrinic acid a,c-diamide adenosyltransferase; TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; cob(I)alamin adenosyltransferase 1059173..1059742 Acidovorax ebreus TPSY 7382336 YP_002552497.1 CDS Dtpsy_1019 NC_011992.1 1059757 1060287 D TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: nme:NMB1528 putative methylated-DNA--protein-cysteine methyltransferase; methylated-DNA/protein-cysteine methyltransferase 1059757..1060287 Acidovorax ebreus TPSY 7382337 YP_002552498.1 CDS Dtpsy_1020 NC_011992.1 1060576 1060914 D PFAM: transposase IS3/IS911 family protein; KEGG: pna:Pnap_4707 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 1060576..1060914 Acidovorax ebreus TPSY 7382338 YP_002552499.1 CDS Dtpsy_1021 NC_011992.1 1060911 1061243 D PFAM: IS66 Orf2 family protein; KEGG: aav:Aave_0711 IS66 Orf2 family protein; IS66 Orf2 family protein 1060911..1061243 Acidovorax ebreus TPSY 7382339 YP_002552500.1 CDS Dtpsy_1022 NC_011992.1 1061318 1062877 D PFAM: transposase IS66; KEGG: rfr:Rfer_3059 transposase IS66; transposase IS66 1061318..1062877 Acidovorax ebreus TPSY 7382340 YP_002552501.1 CDS Dtpsy_1023 NC_011992.1 1062929 1063147 D KEGG: reh:H16_B1776 hypothetical protein; hypothetical protein 1062929..1063147 Acidovorax ebreus TPSY 7382341 YP_002552502.1 CDS Dtpsy_1024 NC_011992.1 1063593 1063919 R KEGG: ajs:Ajs_1105 hypothetical protein; hypothetical protein complement(1063593..1063919) Acidovorax ebreus TPSY 7382343 YP_002552503.1 CDS Dtpsy_1025 NC_011992.1 1064087 1064773 R KEGG: ajs:Ajs_1106 hypothetical protein; hypothetical protein complement(1064087..1064773) Acidovorax ebreus TPSY 7382344 YP_002552504.1 CDS Dtpsy_1026 NC_011992.1 1065051 1065617 D PFAM: cytochrome B561; KEGG: aav:Aave_3507 cytochrome b561; cytochrome B561 1065051..1065617 Acidovorax ebreus TPSY 7382345 YP_002552505.1 CDS Dtpsy_1027 NC_011992.1 1065662 1066243 D PFAM: YceI family protein; KEGG: aav:Aave_3506 YceI family protein; YceI family protein 1065662..1066243 Acidovorax ebreus TPSY 7382346 YP_002552506.1 CDS Dtpsy_1028 NC_011992.1 1066289 1066864 D PFAM: YceI family protein; KEGG: aav:Aave_3505 YceI family protein; YceI family protein 1066289..1066864 Acidovorax ebreus TPSY 7382347 YP_002552507.1 CDS Dtpsy_1029 NC_011992.1 1066968 1067693 R TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ajs:Ajs_1108 haloacid dehalogenase, type II; haloacid dehalogenase, type II complement(1066968..1067693) Acidovorax ebreus TPSY 7382348 YP_002552508.1 CDS Dtpsy_1030 NC_011992.1 1067837 1069072 D PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_1109 major facilitator superfamily transporter; major facilitator superfamily MFS_1 1067837..1069072 Acidovorax ebreus TPSY 7382349 YP_002552509.1 CDS Dtpsy_1032 NC_011992.1 1070289 1070765 R PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: ajs:Ajs_1111 MarR family transcriptional regulator; transcriptional regulator, MarR family complement(1070289..1070765) Acidovorax ebreus TPSY 7382351 YP_002552510.1 CDS Dtpsy_1033 NC_011992.1 1070862 1073171 R NAD-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; does not decarboxylate oxaloacetate; malic enzyme complement(1070862..1073171) Acidovorax ebreus TPSY 7382352 YP_002552511.1 CDS Dtpsy_1034 NC_011992.1 1073361 1074848 R TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: ajs:Ajs_1113 uracil-xanthine permease; xanthine permease complement(1073361..1074848) Acidovorax ebreus TPSY 7382353 YP_002552512.1 CDS Dtpsy_1035 NC_011992.1 1075153 1076427 R PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: ajs:Ajs_1114 peptidase dimerisation domain-containing protein; peptidase dimerisation domain protein complement(1075153..1076427) Acidovorax ebreus TPSY 7382354 YP_002552513.1 CDS Dtpsy_1036 NC_011992.1 1076450 1078219 R putative bifunctional enzyme; OHCU decarboxylase catalyzes 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline to allantoin and allantoate amidohydrolase converts allantoate to (S)-ureidoglycolate and ammonia; putative bifunctional OHCU decarboxylase/allantoate amidohydrolase complement(1076450..1078219) Acidovorax ebreus TPSY 7382355 YP_002552514.1 CDS Dtpsy_1037 NC_011992.1 1078290 1079249 R KEGG: ajs:Ajs_1117 polysaccharide deacetylase; TIGRFAM: urate catabolism protein; PFAM: polysaccharide deacetylase; urate catabolism protein complement(1078290..1079249) Acidovorax ebreus TPSY 7382356 YP_002552515.1 CDS Dtpsy_1038 NC_011992.1 1079246 1079923 R PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH; KEGG: ajs:Ajs_1118 GntR family transcriptional regulator; transcriptional regulator, GntR family complement(1079246..1079923) Acidovorax ebreus TPSY 7382357 YP_002552516.1 CDS Dtpsy_1039 NC_011992.1 1079976 1080890 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_1119 LysR family transcriptional regulator; transcriptional regulator, LysR family complement(1079976..1080890) Acidovorax ebreus TPSY 7382358 YP_002552517.1 CDS Dtpsy_1040 NC_011992.1 1081013 1082110 D KEGG: ajs:Ajs_1120 tartrate dehydrogenase; TIGRFAM: tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; tartrate dehydrogenase 1081013..1082110 Acidovorax ebreus TPSY 7382359 YP_002552518.1 CDS Dtpsy_1041 NC_011992.1 1082170 1083153 D PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_1121 hypothetical protein; hypothetical protein 1082170..1083153 Acidovorax ebreus TPSY 7382360 YP_002552519.1 CDS Dtpsy_1042 NC_011992.1 1083205 1084527 D PFAM: MOFRL domain protein; KEGG: ajs:Ajs_1122 hydroxypyruvate reductase; Hydroxypyruvate reductase 1083205..1084527 Acidovorax ebreus TPSY 7382361 YP_002552520.1 CDS Dtpsy_1043 NC_011992.1 1084851 1085201 D TIGRFAM: hydroxyisourate hydrolase; PFAM: Transthyretin; KEGG: ajs:Ajs_1123 transthyretin; hydroxyisourate hydrolase 1084851..1085201 Acidovorax ebreus TPSY 7382362 YP_002552521.1 CDS Dtpsy_1044 NC_011992.1 1085388 1085861 R KEGG: ajs:Ajs_1124 hypothetical protein; hypothetical protein complement(1085388..1085861) Acidovorax ebreus TPSY 7382363 YP_002552522.1 CDS Dtpsy_1045 NC_011992.1 1086022 1086846 D TIGRFAM: xanthine dehydrogenase accessory protein XdhC; PFAM: protein of unknown function DUF182; KEGG: ajs:Ajs_1125 hypothetical protein; xanthine dehydrogenase accessory protein XdhC 1086022..1086846 Acidovorax ebreus TPSY 7382364 YP_002552523.1 CDS Dtpsy_1046 NC_011992.1 1086920 1088377 R PFAM: Aldehyde Dehydrogenase; KEGG: ajs:Ajs_1126 aldehyde dehydrogenase; Aldehyde Dehydrogenase complement(1086920..1088377) Acidovorax ebreus TPSY 7382365 YP_002552524.1 CDS Dtpsy_1047 NC_011992.1 1088491 1089183 D PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH; KEGG: ajs:Ajs_1127 GntR family transcriptional regulator; transcriptional regulator, GntR family 1088491..1089183 Acidovorax ebreus TPSY 7382366 YP_002552525.1 CDS Dtpsy_1048 NC_011992.1 1089372 1090577 D PFAM: protein of unknown function DUF989; KEGG: ajs:Ajs_1128 hypothetical protein; protein of unknown function DUF989 1089372..1090577 Acidovorax ebreus TPSY 7382857 YP_002552526.1 CDS Dtpsy_1049 NC_011992.1 1090611 1091894 D Catalyzes the deamination of guanine; guanine deaminase 1090611..1091894 Acidovorax ebreus TPSY 7382858 YP_002552527.1 CDS dcd NC_011992.1 1091985 1092551 D Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 1091985..1092551 Acidovorax ebreus TPSY 7382859 YP_002552528.1 CDS Dtpsy_1051 NC_011992.1 1092705 1092953 D hypothetical protein 1092705..1092953 Acidovorax ebreus TPSY 7382860 YP_002552529.1 CDS Dtpsy_1052 NC_011992.1 1093033 1093896 D PFAM: protein of unknown function zinc metallopeptidase putative; KEGG: ajs:Ajs_1131 protein of unknown function, zinc metallopeptidase putative; protein of unknown function zinc metallopeptidase putative 1093033..1093896 Acidovorax ebreus TPSY 7382861 YP_002552530.1 CDS Dtpsy_1053 NC_011992.1 1094012 1095466 D PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: helicase domain protein; DEAD-like helicases; KEGG: ajs:Ajs_1132 DEAD/DEAH box helicase domain-containing protein; DEAD/DEAH box helicase domain protein 1094012..1095466 Acidovorax ebreus TPSY 7382862 YP_002552531.1 CDS Dtpsy_1054 NC_011992.1 1095560 1096174 R KEGG: ajs:Ajs_1133 hypothetical protein; hypothetical protein complement(1095560..1096174) Acidovorax ebreus TPSY 7382863 YP_002552532.1 CDS Dtpsy_1055 NC_011992.1 1096239 1096787 R PFAM: NosL family protein; KEGG: ajs:Ajs_1134 NosL family protein; NosL family protein complement(1096239..1096787) Acidovorax ebreus TPSY 7382864 YP_002552533.1 CDS Dtpsy_1056 NC_011992.1 1096784 1097599 R PFAM: ABC-2 type transporter; KEGG: ajs:Ajs_1135 ABC-2 type transporter; ABC-2 type transporter complement(1096784..1097599) Acidovorax ebreus TPSY 7382865 YP_002552534.1 CDS Dtpsy_1057 NC_011992.1 1097620 1098552 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_1136 ABC transporter related; ABC transporter related complement(1097620..1098552) Acidovorax ebreus TPSY 7382866 YP_002552535.1 CDS Dtpsy_1058 NC_011992.1 1098527 1099798 R PFAM: periplasmic copper-binding; SMART: Parallel beta-helix repeat; Carbohydrate-binding and sugar hydrolysis; KEGG: ajs:Ajs_1137 periplasmic copper-binding; periplasmic copper-binding complement(1098527..1099798) Acidovorax ebreus TPSY 7382867 YP_002552536.1 CDS Dtpsy_1059 NC_011992.1 1099795 1102416 R PFAM: FMN-binding domain protein; KEGG: ajs:Ajs_1138 FMN-binding domain-containing protein; FMN-binding domain protein complement(1099795..1102416) Acidovorax ebreus TPSY 7382868 YP_002552537.1 CDS Dtpsy_1060 NC_011992.1 1102518 1104455 R reduces nitrous oxide to nitrogen; nitrous-oxide reductase complement(1102518..1104455) Acidovorax ebreus TPSY 7382869 YP_002552538.1 CDS Dtpsy_1061 NC_011992.1 1104467 1104832 R KEGG: ajs:Ajs_1140 hypothetical protein; hypothetical protein complement(1104467..1104832) Acidovorax ebreus TPSY 7382870 YP_002552539.1 CDS Dtpsy_1062 NC_011992.1 1105009 1105488 D PFAM: cytochrome c class I; KEGG: ajs:Ajs_1141 cytochrome c, class I; cytochrome c class I 1105009..1105488 Acidovorax ebreus TPSY 7382871 YP_002552540.1 CDS Dtpsy_1063 NC_011992.1 1105507 1106595 D PFAM: ApbE family lipoprotein; KEGG: ajs:Ajs_1142 ApbE family lipoprotein; ApbE family lipoprotein 1105507..1106595 Acidovorax ebreus TPSY 7382872 YP_002552541.1 CDS apaH NC_011992.1 1106702 1107547 R hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; diadenosine tetraphosphatase complement(1106702..1107547) Acidovorax ebreus TPSY 7382873 YP_002552542.1 CDS Dtpsy_1065 NC_011992.1 1107887 1108183 D PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS; KEGG: ajs:Ajs_1144 histone family protein nucleoid-structuring protein H-NS; histone family protein nucleoid-structuring protein H-NS 1107887..1108183 Acidovorax ebreus TPSY 7382874 YP_002552543.1 CDS Dtpsy_1066 NC_011992.1 1108581 1111499 D Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 1108581..1111499 Acidovorax ebreus TPSY 7382875 YP_002552544.1 CDS Dtpsy_1067 NC_011992.1 1111626 1112870 D PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: ajs:Ajs_1146 monooxygenase, FAD-binding; monooxygenase FAD-binding 1111626..1112870 Acidovorax ebreus TPSY 7382876 YP_002552545.1 CDS Dtpsy_1068 NC_011992.1 1112958 1114220 R PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_1147 major facilitator superfamily transporter; major facilitator superfamily MFS_1 complement(1112958..1114220) Acidovorax ebreus TPSY 7382877 YP_002552546.1 CDS Dtpsy_1069 NC_011992.1 1114280 1115110 R PFAM: response regulator receiver; LytTr DNA-binding region; SMART: response regulator receiver; KEGG: ajs:Ajs_1148 response regulator receiver protein; two component transcriptional regulator, LytTR family complement(1114280..1115110) Acidovorax ebreus TPSY 7382878 YP_002552547.1 CDS Dtpsy_1070 NC_011992.1 1115070 1116176 R PFAM: ATP-binding region ATPase domain protein; histidine kinase internal region; KEGG: ajs:Ajs_1150 histidine kinase internal region; histidine kinase internal region complement(1115070..1116176) Acidovorax ebreus TPSY 7382879 YP_002552548.1 CDS Dtpsy_1071 NC_011992.1 1116220 1116540 R KEGG: ajs:Ajs_1151 hypothetical protein; hypothetical protein complement(1116220..1116540) Acidovorax ebreus TPSY 7382880 YP_002552549.1 CDS Dtpsy_1072 NC_011992.1 1116773 1117597 D BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase 1116773..1117597 Acidovorax ebreus TPSY 7382881 YP_002552550.1 CDS Dtpsy_1073 NC_011992.1 1117603 1119393 R KEGG: ajs:Ajs_1153 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; Diverse 7TM receptor transmembrane region; SMART: GGDEF domain containing protein; 7TM domain sensor diguanylate cyclase complement(1117603..1119393) Acidovorax ebreus TPSY 7382882 YP_002552551.1 CDS Dtpsy_1074 NC_011992.1 1119502 1120317 R PFAM: alpha/beta hydrolase fold; KEGG: ajs:Ajs_1154 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(1119502..1120317) Acidovorax ebreus TPSY 7382883 YP_002552552.1 CDS Dtpsy_1075 NC_011992.1 1120326 1121153 R PFAM: 20S proteasome A and B subunits; KEGG: ajs:Ajs_1155 20S proteasome, A and B subunits; 20S proteasome A and B subunits complement(1120326..1121153) Acidovorax ebreus TPSY 7382884 YP_002552553.1 CDS Dtpsy_1076 NC_011992.1 1121320 1123974 R This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS complement(1121320..1123974) Acidovorax ebreus TPSY 7382885 YP_002552554.1 CDS Dtpsy_1077 NC_011992.1 1124044 1125648 R KEGG: ajs:Ajs_1157 alkaline phosphatase; Alkaline phosphatase complement(1124044..1125648) Acidovorax ebreus TPSY 7382886 YP_002552555.1 CDS Dtpsy_1078 NC_011992.1 1125663 1127186 R KEGG: ajs:Ajs_1158 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(1125663..1127186) Acidovorax ebreus TPSY 7382887 YP_002552556.1 CDS Dtpsy_1079 NC_011992.1 1127280 1128254 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ajs:Ajs_1159 alcohol dehydrogenase; Alcohol dehydrogenase zinc-binding domain protein complement(1127280..1128254) Acidovorax ebreus TPSY 7382888 YP_002552557.1 CDS surE NC_011992.1 1128391 1129173 D catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 1128391..1129173 Acidovorax ebreus TPSY 7382889 YP_002552558.1 CDS Dtpsy_1081 NC_011992.1 1129173 1129943 D KEGG: ajs:Ajs_1161 protein-L-isoaspartate O-methyltransferase; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase 1129173..1129943 Acidovorax ebreus TPSY 7382890 YP_002552559.1 CDS Dtpsy_1082 NC_011992.1 1129955 1130866 D PFAM: Peptidoglycan-binding LysM; Peptidase M23; SMART: Peptidoglycan-binding LysM; KEGG: ajs:Ajs_1162 peptidase M23B; Peptidase M23 1129955..1130866 Acidovorax ebreus TPSY 7382891 YP_002552560.1 CDS Dtpsy_1083 NC_011992.1 1130881 1131885 D KEGG: ajs:Ajs_1163 ribosomal large subunit pseudouridine synthase D; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; SMART: RNA-binding S4 domain protein; pseudouridine synthase, RluA family 1130881..1131885 Acidovorax ebreus TPSY 7382892 YP_002552561.1 CDS Dtpsy_1084 NC_011992.1 1132036 1132740 D TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: ajs:Ajs_1164 condensin subunit ScpB; chromosome segregation and condensation protein, ScpB 1132036..1132740 Acidovorax ebreus TPSY 7382893 YP_002552562.1 CDS Dtpsy_1085 NC_011992.1 1132770 1134077 D PFAM: RNA-binding S4 domain protein; pseudouridine synthase; SMART: RNA-binding S4 domain protein; KEGG: ajs:Ajs_1165 ribosomal large subunit pseudouridine synthase B; pseudouridine synthase 1132770..1134077 Acidovorax ebreus TPSY 7382894 YP_002552563.1 CDS ndk NC_011992.1 1134154 1134579 D catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 1134154..1134579 Acidovorax ebreus TPSY 7382895 YP_002552564.1 CDS Dtpsy_1087 NC_011992.1 1134637 1135788 D TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: ajs:Ajs_1167 radical SAM protein; radical SAM enzyme, Cfr family 1134637..1135788 Acidovorax ebreus TPSY 7382896 YP_002552565.1 CDS Dtpsy_1088 NC_011992.1 1135820 1136647 D KEGG: ajs:Ajs_1168 type IV pilus biogenesis/stability protein PilW; TIGRFAM: type IV pilus biogenesis/stability protein PilW; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; type IV pilus biogenesis/stability protein PilW 1135820..1136647 Acidovorax ebreus TPSY 7382897 YP_002552566.1 CDS Dtpsy_1089 NC_011992.1 1136640 1137608 D KEGG: ajs:Ajs_1169 hypothetical protein; hypothetical protein 1136640..1137608 Acidovorax ebreus TPSY 7382898 YP_002552567.1 CDS ispG NC_011992.1 1137609 1138886 D catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1137609..1138886 Acidovorax ebreus TPSY 7382899 YP_002552568.1 CDS hisS NC_011992.1 1138984 1140273 D catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 1138984..1140273 Acidovorax ebreus TPSY 7382900 YP_002552569.1 CDS Dtpsy_1092 NC_011992.1 1140287 1140964 D KEGG: ajs:Ajs_1172 hypothetical protein; hypothetical protein 1140287..1140964 Acidovorax ebreus TPSY 7382901 YP_002552570.1 CDS Dtpsy_1093 NC_011992.1 1140985 1142112 D TIGRFAM: outer membrane assembly lipoprotein YfgL; PFAM: Pyrrolo-quinoline quinone; KEGG: ajs:Ajs_1173 pyrrolo-quinoline quinone; outer membrane assembly lipoprotein YfgL 1140985..1142112 Acidovorax ebreus TPSY 7382902 YP_002552571.1 CDS engA NC_011992.1 1142132 1143475 D EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 1142132..1143475 Acidovorax ebreus TPSY 7382903 YP_002552572.1 CDS Dtpsy_1095 NC_011992.1 1143553 1143804 D TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; KEGG: ajs:Ajs_1175 RNA chaperone Hfq; RNA chaperone Hfq 1143553..1143804 Acidovorax ebreus TPSY 7382904 YP_002552573.1 CDS Dtpsy_1096 NC_011992.1 1143868 1145046 D TIGRFAM: small GTP-binding protein; GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: ajs:Ajs_1176 small GTP-binding protein; GTP-binding proten HflX 1143868..1145046 Acidovorax ebreus TPSY 7382905 YP_002552574.1 CDS Dtpsy_1097 NC_011992.1 1145098 1146453 D KEGG: ajs:Ajs_1177 HflK protein; TIGRFAM: HflK protein; PFAM: band 7 protein; SMART: band 7 protein; HflK protein 1145098..1146453 Acidovorax ebreus TPSY 7382906 YP_002552575.1 CDS Dtpsy_1098 NC_011992.1 1146463 1147368 D KEGG: ajs:Ajs_1178 HflC protein; TIGRFAM: HflC protein; PFAM: band 7 protein; SMART: band 7 protein; HflC protein 1146463..1147368 Acidovorax ebreus TPSY 7382907 YP_002552576.1 CDS Dtpsy_1099 NC_011992.1 1147398 1147577 D KEGG: ajs:Ajs_1179 hypothetical protein; hypothetical protein 1147398..1147577 Acidovorax ebreus TPSY 7382908 YP_002552577.1 CDS Dtpsy_1100 NC_011992.1 1147653 1148801 D TIGRFAM: histidyl-tRNA synthetase 2; PFAM: tRNA synthetase class II (G H P and S); KEGG: ajs:Ajs_1180 tRNA synthetase, class II (G, H, P and S); histidyl-tRNA synthetase 2 1147653..1148801 Acidovorax ebreus TPSY 7382909 YP_002552578.1 CDS Dtpsy_1101 NC_011992.1 1148831 1150207 D catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 1148831..1150207 Acidovorax ebreus TPSY 7382910 YP_002552579.1 CDS Dtpsy_1102 NC_011992.1 1150265 1150789 D PFAM: phosphoribosyltransferase; KEGG: ajs:Ajs_1182 phosphoribosyltransferase; phosphoribosyltransferase 1150265..1150789 Acidovorax ebreus TPSY 7382911 YP_002552580.1 CDS Dtpsy_1103 NC_011992.1 1156578 1157315 D PFAM: pseudouridine synthase; KEGG: ajs:Ajs_1183 ribosomal small subunit pseudouridine synthase A; pseudouridine synthase 1156578..1157315 Acidovorax ebreus TPSY 7382918 YP_002552581.1 CDS Dtpsy_1104 NC_011992.1 1157475 1158449 D KEGG: ajs:Ajs_1184 hypothetical protein; hypothetical protein 1157475..1158449 Acidovorax ebreus TPSY 7382919 YP_002552582.1 CDS Dtpsy_1105 NC_011992.1 1158436 1159272 D PFAM: polysaccharide deacetylase; KEGG: ajs:Ajs_1185 polysaccharide deacetylase; polysaccharide deacetylase 1158436..1159272 Acidovorax ebreus TPSY 7382920 YP_002552583.1 CDS Dtpsy_1106 NC_011992.1 1159323 1160321 D PFAM: fatty acid hydroxylase; KEGG: ajs:Ajs_1186 hypothetical protein; fatty acid hydroxylase 1159323..1160321 Acidovorax ebreus TPSY 7382921 YP_002552584.1 CDS Dtpsy_1107 NC_011992.1 1160337 1161239 D KEGG: ajs:Ajs_1187 putative transmembrane protein; putative transmembrane protein 1160337..1161239 Acidovorax ebreus TPSY 7382922 YP_002552585.1 CDS Dtpsy_1108 NC_011992.1 1161236 1162057 D PFAM: molybdopterin binding domain; KEGG: ajs:Ajs_1188 molybdopterin binding domain-containing protein; molybdopterin binding domain protein 1161236..1162057 Acidovorax ebreus TPSY 7382923 YP_002552586.1 CDS Dtpsy_1109 NC_011992.1 1162214 1163629 D TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: ajs:Ajs_1189 L-glutamine synthetase; glutamine synthetase, type I 1162214..1163629 Acidovorax ebreus TPSY 7382924 YP_002552587.1 CDS Dtpsy_1110 NC_011992.1 1163837 1164340 D KEGG: ajs:Ajs_1190 putative signal peptide protein; putative signal peptide protein 1163837..1164340 Acidovorax ebreus TPSY 7382925 YP_002552588.1 CDS Dtpsy_1111 NC_011992.1 1164357 1165445 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ajs:Ajs_1191 signal transduction histidine kinase, nitrogen specific, NtrB; signal transduction histidine kinase, nitrogen specific, NtrB 1164357..1165445 Acidovorax ebreus TPSY 7382926 YP_002552589.1 CDS Dtpsy_1112 NC_011992.1 1165497 1167032 D KEGG: ajs:Ajs_1192 nitrogen metabolism transcriptional regulator, NtrC, fis family; TIGRFAM: nitrogen regulation protein NR(I); PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; nitrogen metabolism transcriptional regulator, NtrC, Fis Family 1165497..1167032 Acidovorax ebreus TPSY 7382927 YP_002552590.1 CDS Dtpsy_1113 NC_011992.1 1167214 1168167 D PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_1193 hypothetical protein; hypothetical protein 1167214..1168167 Acidovorax ebreus TPSY 7382928 YP_002552591.1 CDS Dtpsy_1114 NC_011992.1 1168208 1168984 R TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: ajs:Ajs_1194 exodeoxyribonuclease III Xth; exodeoxyribonuclease III Xth complement(1168208..1168984) Acidovorax ebreus TPSY 7382929 YP_002552592.1 CDS Dtpsy_1115 NC_011992.1 1169055 1169549 R PFAM: dihydrofolate reductase region; KEGG: ajs:Ajs_1195 dihydrofolate reductase; Dihydrofolate reductase complement(1169055..1169549) Acidovorax ebreus TPSY 7382930 YP_002552593.1 CDS thyA NC_011992.1 1169566 1170399 R ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase complement(1169566..1170399) Acidovorax ebreus TPSY 7382931 YP_002552594.1 CDS Dtpsy_1117 NC_011992.1 1170452 1171921 R PFAM: FAD linked oxidase domain protein; KEGG: ajs:Ajs_1198 FAD linked oxidase domain-containing protein; FAD linked oxidase domain protein complement(1170452..1171921) Acidovorax ebreus TPSY 7382932 YP_002552595.1 CDS Dtpsy_1118 NC_011992.1 1171918 1172334 R KEGG: ajs:Ajs_1199 membrane protein-like protein; membrane protein-like protein complement(1171918..1172334) Acidovorax ebreus TPSY 7382933 YP_002552596.1 CDS Dtpsy_1119 NC_011992.1 1172356 1173645 D TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN; KEGG: ajs:Ajs_1200 putative ribonuclease BN; ribonuclease BN 1172356..1173645 Acidovorax ebreus TPSY 7382934 YP_002552597.1 CDS Dtpsy_1120 NC_011992.1 1173670 1174938 R TIGRFAM: squalene-associated FAD-dependent desaturase; PFAM: amine oxidase; KEGG: ajs:Ajs_1201 amine oxidase; squalene-associated FAD-dependent desaturase complement(1173670..1174938) Acidovorax ebreus TPSY 7382935 YP_002552598.1 CDS Dtpsy_1121 NC_011992.1 1174971 1175810 R TIGRFAM: squalene synthase HpnD; PFAM: Squalene/phytoene synthase; KEGG: ajs:Ajs_1202 farnesyl-diphosphate farnesyltransferase; squalene synthase HpnD complement(1174971..1175810) Acidovorax ebreus TPSY 7382936 YP_002552599.1 CDS Dtpsy_1122 NC_011992.1 1175958 1176848 D PFAM: metallophosphoesterase; KEGG: ajs:Ajs_1203 metallophosphoesterase; metallophosphoesterase 1175958..1176848 Acidovorax ebreus TPSY 7382937 YP_002552600.1 CDS Dtpsy_1123 NC_011992.1 1176854 1178020 D KEGG: ajs:Ajs_1204 monogalactosyldiacylglycerol synthase; monogalactosyldiacylglycerol synthase 1176854..1178020 Acidovorax ebreus TPSY 7382938 YP_002552601.1 CDS Dtpsy_1124 NC_011992.1 1178106 1178996 R TIGRFAM: squalene synthase HpnC; PFAM: Squalene/phytoene synthase; KEGG: ajs:Ajs_1205 squalene/phytoene synthase; squalene synthase HpnC complement(1178106..1178996) Acidovorax ebreus TPSY 7384471 YP_002552602.1 CDS Dtpsy_1125 NC_011992.1 1179084 1180337 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: ajs:Ajs_1206 RND family efflux transporter MFP subunit; efflux transporter, RND family, MFP subunit 1179084..1180337 Acidovorax ebreus TPSY 7384553 YP_002552603.1 CDS Dtpsy_1126 NC_011992.1 1180349 1183498 D PFAM: acriflavin resistance protein; KEGG: ajs:Ajs_1207 acriflavin resistance protein; acriflavin resistance protein 1180349..1183498 Acidovorax ebreus TPSY 7384554 YP_002552604.1 CDS tig NC_011992.1 1183753 1185063 D Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 1183753..1185063 Acidovorax ebreus TPSY 7384556 YP_002552605.1 CDS clpP NC_011992.1 1185186 1185794 D hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 1185186..1185794 Acidovorax ebreus TPSY 7384557 YP_002552606.1 CDS clpX NC_011992.1 1185892 1187157 D binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 1185892..1187157 Acidovorax ebreus TPSY 7384558 YP_002552607.1 CDS Dtpsy_1130 NC_011992.1 1187297 1189717 D KEGG: ajs:Ajs_1211 Lon-A peptidase; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: peptidase S16 lon domain protein; AAA ATPase; ATP-dependent protease La 1187297..1189717 Acidovorax ebreus TPSY 7384559 YP_002552608.1 CDS Dtpsy_1134 NC_011992.1 1191747 1191941 D PFAM: Heavy metal transport/detoxification protein; KEGG: smt:Smal_1772 heavy metal transport/detoxification protein; Heavy metal transport/detoxification protein 1191747..1191941 Acidovorax ebreus TPSY 7384566 YP_002552609.1 CDS Dtpsy_1136 NC_011992.1 1192976 1193314 R TIGRFAM: ferredoxin, 2Fe-2S type, ISC system; PFAM: ferredoxin; KEGG: bpa:BPP3861 [2Fe-2S] ferredoxin; ferredoxin, 2Fe-2S type, ISC system complement(1192976..1193314) Acidovorax ebreus TPSY 7384568 YP_002552610.1 CDS Dtpsy_1137 NC_011992.1 1193330 1193809 R KEGG: ajs:Ajs_1373 MerR family transcriptional regulator; TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; SMART: regulatory protein MerR; transcriptional regulator, MerR family complement(1193330..1193809) Acidovorax ebreus TPSY 7384569 YP_002552611.1 CDS Dtpsy_1138 NC_011992.1 1193825 1196350 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper ion binding protein; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: bav:BAV0629 copper-transporting P-type ATPase; heavy metal translocating P-type ATPase complement(1193825..1196350) Acidovorax ebreus TPSY 7384570 YP_002552612.1 CDS Dtpsy_1139 NC_011992.1 1196556 1196912 D PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: shw:Sputw3181_1122 regulatory protein, ArsR; transcriptional regulator, ArsR family 1196556..1196912 Acidovorax ebreus TPSY 7384571 YP_002552613.1 CDS Dtpsy_1140 NC_011992.1 1197022 1198449 R TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; pyridine nucleotide-disulphide oxidoreductase dimerisation region; HI0933 family protein; KEGG: aav:Aave_3246 dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase complement(1197022..1198449) Acidovorax ebreus TPSY 7384572 YP_002552614.1 CDS Dtpsy_1141 NC_011992.1 1198555 1198953 R KEGG: ajs:Ajs_1328 hypothetical protein; hypothetical protein complement(1198555..1198953) Acidovorax ebreus TPSY 7384573 YP_002552615.1 CDS Dtpsy_1142 NC_011992.1 1199007 1202153 R TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: mpt:Mpe_A1649 cation efflux system protein, AcrB/AcrD/AcrF family protein; heavy metal efflux pump, CzcA family complement(1199007..1202153) Acidovorax ebreus TPSY 7384574 YP_002552616.1 CDS Dtpsy_1143 NC_011992.1 1202167 1203282 R TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: mpt:Mpe_A1650 hypothetical protein; efflux transporter, RND family, MFP subunit complement(1202167..1203282) Acidovorax ebreus TPSY 7384575 YP_002552617.1 CDS Dtpsy_1144 NC_011992.1 1203279 1203830 R KEGG: mpt:Mpe_A2672 hypothetical protein; hypothetical protein complement(1203279..1203830) Acidovorax ebreus TPSY 7384576 YP_002552618.1 CDS Dtpsy_1145 NC_011992.1 1203865 1205193 R PFAM: outer membrane efflux protein; KEGG: mpt:Mpe_A1652 hypothetical protein; outer membrane efflux protein complement(1203865..1205193) Acidovorax ebreus TPSY 7384577 YP_002552619.1 CDS Dtpsy_1146 NC_011992.1 1205476 1205733 D PFAM: protein of unknown function DUF156; KEGG: ret:RHE_PE00217 hypothetical protein; protein of unknown function DUF156 1205476..1205733 Acidovorax ebreus TPSY 7384578 YP_002552620.1 CDS Dtpsy_1147 NC_011992.1 1205743 1207053 D PFAM: major facilitator superfamily MFS_1; KEGG: pau:PA14_31240 putative NrbE-like protein; major facilitator superfamily MFS_1 1205743..1207053 Acidovorax ebreus TPSY 7384579 YP_002552621.1 CDS Dtpsy_1148 NC_011992.1 1207187 1208209 D TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: shw:Sputw3181_1124 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter 1207187..1208209 Acidovorax ebreus TPSY 7384580 YP_002552622.1 CDS Dtpsy_1149 NC_011992.1 1208253 1208630 D PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: xcv:XCV2337 ArsR family transcriptional regulator; transcriptional regulator, ArsR family 1208253..1208630 Acidovorax ebreus TPSY 7384581 YP_002552623.1 CDS Dtpsy_1150 NC_011992.1 1208860 1209429 D KEGG: net:Neut_0038 hypothetical protein; hypothetical protein 1208860..1209429 Acidovorax ebreus TPSY 7384582 YP_002552624.1 CDS Dtpsy_1151 NC_011992.1 1209596 1212310 D TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: shw:Sputw3181_1126 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase 1209596..1212310 Acidovorax ebreus TPSY 7384583 YP_002552625.1 CDS Dtpsy_1152 NC_011992.1 1212422 1213729 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: shw:Sputw3181_1129 RND family efflux transporter MFP subunit; efflux transporter, RND family, MFP subunit 1212422..1213729 Acidovorax ebreus TPSY 7384584 YP_002552626.1 CDS Dtpsy_1153 NC_011992.1 1213726 1216902 D TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: shw:Sputw3181_1130 hydrophobe/amphiphile efflux-1 (HAE1) family protein; transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1213726..1216902 Acidovorax ebreus TPSY 7384585 YP_002552627.1 CDS Dtpsy_1154 NC_011992.1 1216923 1218428 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: shw:Sputw3181_1131 RND efflux system outer membrane lipoprotein; RND efflux system, outer membrane lipoprotein, NodT family 1216923..1218428 Acidovorax ebreus TPSY 7384586 YP_002552628.1 CDS Dtpsy_1155 NC_011992.1 1218478 1218864 D PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; SMART: regulatory protein MerR; KEGG: bbr:BB2505 MerR family transcriptional regulator; transcriptional regulator, MerR family 1218478..1218864 Acidovorax ebreus TPSY 7384587 YP_002552629.1 CDS Dtpsy_1156 NC_011992.1 1218944 1220125 D PFAM: major facilitator superfamily MFS_1; KEGG: oan:Oant_4451 major facilitator superfamily MFS_1; major facilitator superfamily MFS_1 1218944..1220125 Acidovorax ebreus TPSY 7384588 YP_002552630.1 CDS Dtpsy_1157 NC_011992.1 1220289 1220873 R PFAM: regulatory protein TetR; KEGG: shm:Shewmr7_2884 transcriptional regulator, TetR family; transcriptional regulator, TetR family complement(1220289..1220873) Acidovorax ebreus TPSY 7384589 YP_002552631.1 CDS Dtpsy_1158 NC_011992.1 1220984 1222438 D TIGRFAM: mercuric reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: ace:Acel_0690 mercuric reductase; mercuric reductase 1220984..1222438 Acidovorax ebreus TPSY 7384590 YP_002552632.1 CDS Dtpsy_1160 NC_011992.1 1223708 1224211 R KEGG: asa:ASA_0445 hypothetical protein; hypothetical protein complement(1223708..1224211) Acidovorax ebreus TPSY 7384592 YP_002552633.1 CDS Dtpsy_1161 NC_011992.1 1224393 1224935 R PFAM: protein of unknown function DUF1486; KEGG: sun:SUN_0926 hypothetical protein; protein of unknown function DUF1486 complement(1224393..1224935) Acidovorax ebreus TPSY 7384593 YP_002552634.1 CDS Dtpsy_1162 NC_011992.1 1225135 1225830 D PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH; KEGG: bur:Bcep18194_C6865 GntR family transcriptional regulator; GntR domain protein 1225135..1225830 Acidovorax ebreus TPSY 7384594 YP_002552635.1 CDS Dtpsy_1163 NC_011992.1 1225986 1226396 R KEGG: bur:Bcep18194_C6852 hypothetical protein; hypothetical protein complement(1225986..1226396) Acidovorax ebreus TPSY 7384595 YP_002552636.1 CDS Dtpsy_1164 NC_011992.1 1226605 1228584 R KEGG: xcv:XCV2367 hypothetical protein; hypothetical protein complement(1226605..1228584) Acidovorax ebreus TPSY 7384596 YP_002552637.1 CDS Dtpsy_1165 NC_011992.1 1228584 1229024 R KEGG: rme:Rmet_2352 putative secreted protein; putative secreted protein complement(1228584..1229024) Acidovorax ebreus TPSY 7384597 YP_002552638.1 CDS Dtpsy_1166 NC_011992.1 1229005 1230423 R KEGG: bpt:Bpet1079 hypothetical protein; hypothetical protein complement(1229005..1230423) Acidovorax ebreus TPSY 7384598 YP_002552639.1 CDS Dtpsy_1167 NC_011992.1 1230413 1231330 R KEGG: xcv:XCV2370 putative secreted protein; putative secreted protein complement(1230413..1231330) Acidovorax ebreus TPSY 7384599 YP_002552640.1 CDS Dtpsy_1168 NC_011992.1 1231327 1232019 R KEGG: ajs:Ajs_1402 putative secreted protein; putative secreted protein complement(1231327..1232019) Acidovorax ebreus TPSY 7384600 YP_002552641.1 CDS Dtpsy_1169 NC_011992.1 1232016 1232426 R KEGG: bpt:Bpet1076 hypothetical protein; hypothetical protein complement(1232016..1232426) Acidovorax ebreus TPSY 7384601 YP_002552642.1 CDS Dtpsy_1170 NC_011992.1 1232439 1232798 R KEGG: bpt:Bpet1488 hypothetical protein; hypothetical protein complement(1232439..1232798) Acidovorax ebreus TPSY 7384602 YP_002552643.1 CDS Dtpsy_1171 NC_011992.1 1232815 1233048 R KEGG: rme:Rmet_2346 hypothetical protein; hypothetical protein complement(1232815..1233048) Acidovorax ebreus TPSY 7384603 YP_002552644.1 CDS Dtpsy_1172 NC_011992.1 1233045 1233425 R PFAM: plasmid conserved hypothetical protein RAQPRD; KEGG: har:HEAR2012 putative signal peptide; plasmid conserved hypothetical protein RAQPRD complement(1233045..1233425) Acidovorax ebreus TPSY 7384604 YP_002552645.1 CDS Dtpsy_1173 NC_011992.1 1233634 1234563 D KEGG: kpe:KPK_1762 hypothetical protein; hypothetical protein 1233634..1234563 Acidovorax ebreus TPSY 7384605 YP_002552646.1 CDS Dtpsy_1174 NC_011992.1 1234610 1235371 R KEGG: bpt:Bpet1484 hypothetical protein; hypothetical protein complement(1234610..1235371) Acidovorax ebreus TPSY 7384606 YP_002552647.1 CDS Dtpsy_1175 NC_011992.1 1235368 1236240 R KEGG: xcv:XCV2377 hypothetical protein; hypothetical protein complement(1235368..1236240) Acidovorax ebreus TPSY 7384607 YP_002552648.1 CDS Dtpsy_1176 NC_011992.1 1236245 1236784 R KEGG: xcv:XCV2378 putative secreted protein; putative secreted protein complement(1236245..1236784) Acidovorax ebreus TPSY 7384608 YP_002552649.1 CDS Dtpsy_1177 NC_011992.1 1236781 1237371 R PFAM: Lytic transglycosylase catalytic; KEGG: xcv:XCV2379 putative lytic transglycosylase precursor; Lytic transglycosylase catalytic complement(1236781..1237371) Acidovorax ebreus TPSY 7384609 YP_002552650.1 CDS Dtpsy_1178 NC_011992.1 1237353 1238078 R KEGG: ajs:Ajs_1411 putative secreted protein; putative secreted protein complement(1237353..1238078) Acidovorax ebreus TPSY 7384610 YP_002552651.1 CDS Dtpsy_1179 NC_011992.1 1238093 1238734 R KEGG: ajs:Ajs_1412 putative secreted protein; putative secreted protein complement(1238093..1238734) Acidovorax ebreus TPSY 7384611 YP_002552652.1 CDS Dtpsy_1180 NC_011992.1 1238731 1239330 R KEGG: xcv:XCV2382 putative secreted protein; putative secreted protein complement(1238731..1239330) Acidovorax ebreus TPSY 7384612 YP_002552653.1 CDS Dtpsy_1181 NC_011992.1 1239489 1240103 R KEGG: bpt:Bpet1477 hypothetical protein; hypothetical protein complement(1239489..1240103) Acidovorax ebreus TPSY 7384613 YP_002552654.1 CDS Dtpsy_1182 NC_011992.1 1240213 1240959 R KEGG: xcv:XCV2416 hypothetical protein; hypothetical protein complement(1240213..1240959) Acidovorax ebreus TPSY 7384614 YP_002552655.1 CDS Dtpsy_1184 NC_011992.1 1242206 1242826 D KEGG: ajs:Ajs_2624 hypothetical protein; hypothetical protein 1242206..1242826 Acidovorax ebreus TPSY 7384617 YP_002552656.1 CDS uvrC NC_011992.1 1242927 1244900 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 1242927..1244900 Acidovorax ebreus TPSY 7384618 YP_002552657.1 CDS Dtpsy_1186 NC_011992.1 1244949 1245515 D KEGG: ajs:Ajs_2622 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase 1244949..1245515 Acidovorax ebreus TPSY 7384619 YP_002552658.1 CDS Dtpsy_1187 NC_011992.1 1245921 1246193 D PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: ajs:Ajs_2621 histone family protein DNA-binding protein; histone family protein DNA-binding protein 1245921..1246193 Acidovorax ebreus TPSY 7384620 YP_002552659.1 CDS Dtpsy_1188 NC_011992.1 1246343 1248265 D PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: ajs:Ajs_2620 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 1246343..1248265 Acidovorax ebreus TPSY 7384622 YP_002552660.1 CDS Dtpsy_1189 NC_011992.1 1248598 1248762 R hypothetical protein complement(1248598..1248762) Acidovorax ebreus TPSY 7384624 YP_002552661.1 CDS Dtpsy_1190 NC_011992.1 1249290 1250597 R PFAM: transposase IS66; KEGG: rfr:Rfer_3059 transposase IS66; transposase IS66 complement(1249290..1250597) Acidovorax ebreus TPSY 7384625 YP_002552662.1 CDS Dtpsy_1191 NC_011992.1 1250672 1251004 R PFAM: IS66 Orf2 family protein; KEGG: aav:Aave_0711 IS66 Orf2 family protein; IS66 Orf2 family protein complement(1250672..1251004) Acidovorax ebreus TPSY 7384626 YP_002552663.1 CDS Dtpsy_1192 NC_011992.1 1251001 1251339 R PFAM: transposase IS3/IS911 family protein; KEGG: pna:Pnap_4707 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein complement(1251001..1251339) Acidovorax ebreus TPSY 7384627 YP_002552664.1 CDS Dtpsy_1193 NC_011992.1 1252504 1254987 D PFAM: type III restriction protein res subunit; protein of unknown function DUF450; EcoEI R domain protein; SMART: DEAD-like helicases; KEGG: ajs:Ajs_2618 EcoEI R domain-containing protein; EcoEI R domain protein 1252504..1254987 Acidovorax ebreus TPSY 7384628 YP_002552665.1 CDS Dtpsy_1196 NC_011992.1 1256345 1256764 D hypothetical protein 1256345..1256764 Acidovorax ebreus TPSY 7384631 YP_002552666.1 CDS Dtpsy_1198 NC_011992.1 1257646 1259466 R PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A; KEGG: ajs:Ajs_2610 peptidase M14, carboxypeptidase A; peptidase M14 carboxypeptidase A complement(1257646..1259466) Acidovorax ebreus TPSY 7385244 YP_002552667.1 CDS Dtpsy_1199 NC_011992.1 1259603 1261339 R PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: helicase domain protein; DEAD-like helicases; KEGG: ajs:Ajs_2609 DEAD/DEAH box helicase domain-containing protein; DEAD/DEAH box helicase domain protein complement(1259603..1261339) Acidovorax ebreus TPSY 7383101 YP_002552668.1 CDS Dtpsy_1200 NC_011992.1 1261596 1263257 D ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; putative ABC transporter ATP-binding protein 1261596..1263257 Acidovorax ebreus TPSY 7383102 YP_002552669.1 CDS Dtpsy_1201 NC_011992.1 1263315 1265543 D KEGG: ajs:Ajs_2607 hypothetical protein; hypothetical protein 1263315..1265543 Acidovorax ebreus TPSY 7383103 YP_002552670.1 CDS Dtpsy_1202 NC_011992.1 1265573 1266910 R KEGG: ajs:Ajs_2606 TRAP transporter solute receptor TAXI family protein; TRAP transporter solute receptor TAXI family protein complement(1265573..1266910) Acidovorax ebreus TPSY 7383104 YP_002552671.1 CDS Dtpsy_1203 NC_011992.1 1266913 1267926 R PFAM: peptidase S58 DmpA; KEGG: ajs:Ajs_2605 peptidase S58, DmpA; peptidase S58 DmpA complement(1266913..1267926) Acidovorax ebreus TPSY 7383105 YP_002552672.1 CDS Dtpsy_1205 NC_011992.1 1269358 1269765 R KEGG: ajs:Ajs_2603 hypothetical protein; hypothetical protein complement(1269358..1269765) Acidovorax ebreus TPSY 7383107 YP_002552673.1 CDS Dtpsy_1206 NC_011992.1 1269765 1270259 R PFAM: protein of unknown function DUF411; KEGG: ajs:Ajs_2602 hypothetical protein; protein of unknown function DUF411 complement(1269765..1270259) Acidovorax ebreus TPSY 7383108 YP_002552674.1 CDS Dtpsy_1207 NC_011992.1 1270294 1270776 R PFAM: blue (type 1) copper domain protein; KEGG: ajs:Ajs_2601 blue (type1) copper domain-containing protein; blue (type 1) copper domain protein complement(1270294..1270776) Acidovorax ebreus TPSY 7383109 YP_002552675.1 CDS Dtpsy_1208 NC_011992.1 1270793 1272181 R PFAM: multicopper oxidase type 2; multicopper oxidase type 3; KEGG: ajs:Ajs_2600 multicopper oxidase, type 3; multicopper oxidase type 3 complement(1270793..1272181) Acidovorax ebreus TPSY 7383110 YP_002552676.1 CDS Dtpsy_1209 NC_011992.1 1272183 1273616 R KEGG: ajs:Ajs_2599 copper tolerance protein; copper tolerance protein complement(1272183..1273616) Acidovorax ebreus TPSY 7383111 YP_002552677.1 CDS Dtpsy_1210 NC_011992.1 1273613 1273960 R KEGG: ajs:Ajs_2598 hypothetical protein; hypothetical protein complement(1273613..1273960) Acidovorax ebreus TPSY 7383112 YP_002552678.1 CDS Dtpsy_1211 NC_011992.1 1274064 1274465 R KEGG: ajs:Ajs_2597 hypothetical protein; hypothetical protein complement(1274064..1274465) Acidovorax ebreus TPSY 7383113 YP_002552679.1 CDS Dtpsy_1212 NC_011992.1 1274541 1275167 R PFAM: protein of unknown function DUF161; KEGG: ajs:Ajs_2596 hypothetical protein; protein of unknown function DUF161 complement(1274541..1275167) Acidovorax ebreus TPSY 7383114 YP_002552680.1 CDS Dtpsy_1213 NC_011992.1 1275315 1275734 R KEGG: ajs:Ajs_2595 hypothetical protein; hypothetical protein complement(1275315..1275734) Acidovorax ebreus TPSY 7383115 YP_002552681.1 CDS Dtpsy_1214 NC_011992.1 1275731 1277752 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: ajs:Ajs_2594 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase complement(1275731..1277752) Acidovorax ebreus TPSY 7383116 YP_002552682.1 CDS Dtpsy_1215 NC_011992.1 1277793 1278251 D PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; SMART: regulatory protein MerR; KEGG: ajs:Ajs_2593 MerR family transcriptional regulator; transcriptional regulator, MerR family 1277793..1278251 Acidovorax ebreus TPSY 7383117 YP_002552683.1 CDS Dtpsy_1216 NC_011992.1 1278361 1279170 D PFAM: protein of unknown function DUF140; KEGG: ajs:Ajs_2592 ABC-type transport system ipermease component; protein of unknown function DUF140 1278361..1279170 Acidovorax ebreus TPSY 7383118 YP_002552684.1 CDS Dtpsy_1217 NC_011992.1 1279186 1280196 D PFAM: Mammalian cell entry related domain protein; KEGG: ajs:Ajs_2591 hypothetical protein; Mammalian cell entry related domain protein 1279186..1280196 Acidovorax ebreus TPSY 7383119 YP_002552685.1 CDS Dtpsy_1218 NC_011992.1 1280193 1280873 D KEGG: ajs:Ajs_2590 hypothetical protein; hypothetical protein 1280193..1280873 Acidovorax ebreus TPSY 7383120 YP_002552686.1 CDS Dtpsy_1219 NC_011992.1 1280941 1281114 R KEGG: ajs:Ajs_2589 hypothetical protein; hypothetical protein complement(1280941..1281114) Acidovorax ebreus TPSY 7383121 YP_002552687.1 CDS Dtpsy_1220 NC_011992.1 1281292 1282809 R TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: ajs:Ajs_2588 carbohydrate kinase, YjeF related protein; carbohydrate kinase, YjeF related protein complement(1281292..1282809) Acidovorax ebreus TPSY 7383122 YP_002552688.1 CDS Dtpsy_1221 NC_011992.1 1282851 1284098 R PFAM: FAD dependent oxidoreductase; KEGG: ajs:Ajs_2587 D-amino-acid dehydrogenase; D-amino-acid dehydrogenase complement(1282851..1284098) Acidovorax ebreus TPSY 7383123 YP_002552689.1 CDS Dtpsy_1222 NC_011992.1 1284150 1285496 R catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase complement(1284150..1285496) Acidovorax ebreus TPSY 7383124 YP_002552690.1 CDS rpsB NC_011992.1 1285697 1286449 D one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 1285697..1286449 Acidovorax ebreus TPSY 7383125 YP_002552691.1 CDS tsf NC_011992.1 1286558 1287454 D EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 1286558..1287454 Acidovorax ebreus TPSY 7383126 YP_002552692.1 CDS pyrH NC_011992.1 1287512 1288234 D Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 1287512..1288234 Acidovorax ebreus TPSY 7383127 YP_002552693.1 CDS frr NC_011992.1 1288283 1288843 D Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 1288283..1288843 Acidovorax ebreus TPSY 7383128 YP_002552694.1 CDS Dtpsy_1227 NC_011992.1 1288872 1289606 D KEGG: ajs:Ajs_2581 undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; undecaprenyl diphosphate synthase 1288872..1289606 Acidovorax ebreus TPSY 7383129 YP_002552695.1 CDS Dtpsy_1228 NC_011992.1 1289640 1290494 D PFAM: phosphatidate cytidylyltransferase; KEGG: ajs:Ajs_2580 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase 1289640..1290494 Acidovorax ebreus TPSY 7383130 YP_002552696.1 CDS Dtpsy_1229 NC_011992.1 1290491 1291663 D catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1290491..1291663 Acidovorax ebreus TPSY 7383131 YP_002552697.1 CDS Dtpsy_1230 NC_011992.1 1291782 1293146 D TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; KEGG: ajs:Ajs_2578 peptidase RseP; membrane-associated zinc metalloprotease 1291782..1293146 Acidovorax ebreus TPSY 7383132 YP_002552698.1 CDS Dtpsy_1231 NC_011992.1 1293192 1295489 D TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: ajs:Ajs_2577 surface antigen (D15); outer membrane protein assembly complex, YaeT protein 1293192..1295489 Acidovorax ebreus TPSY 7383133 YP_002552699.1 CDS Dtpsy_1232 NC_011992.1 1295489 1296010 D PFAM: outer membrane chaperone Skp (OmpH); KEGG: ajs:Ajs_2576 outer membrane chaperone Skp (OmpH); outer membrane chaperone Skp (OmpH) 1295489..1296010 Acidovorax ebreus TPSY 7383134 YP_002552700.1 CDS lpxD NC_011992.1 1296035 1297015 D adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 1296035..1297015 Acidovorax ebreus TPSY 7383135 YP_002552701.1 CDS fabZ NC_011992.1 1297031 1297471 D in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 1297031..1297471 Acidovorax ebreus TPSY 7383136 YP_002552702.1 CDS Dtpsy_1235 NC_011992.1 1297489 1298280 D catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 1297489..1298280 Acidovorax ebreus TPSY 7383137 YP_002552703.1 CDS Dtpsy_1236 NC_011992.1 1298296 1299453 D KEGG: ajs:Ajs_2572 lipid-A-disaccharide synthase; TIGRFAM: lipid-A-disaccharide synthase; PFAM: glycosyl transferase family 19; lipid-A-disaccharide synthase 1298296..1299453 Acidovorax ebreus TPSY 7383138 YP_002552704.1 CDS rnhB NC_011992.1 1299428 1300057 D RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 1299428..1300057 Acidovorax ebreus TPSY 7383139 YP_002552705.1 CDS Dtpsy_1238 NC_011992.1 1300088 1300870 D PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: ajs:Ajs_2570 tRNA/rRNA methyltransferase (SpoU); tRNA/rRNA methyltransferase (SpoU) 1300088..1300870 Acidovorax ebreus TPSY 7383140 YP_002552706.1 CDS Dtpsy_1239 NC_011992.1 1300928 1301302 R KEGG: ajs:Ajs_2569 hypothetical protein; hypothetical protein complement(1300928..1301302) Acidovorax ebreus TPSY 7383141 YP_002552707.1 CDS Dtpsy_1240 NC_011992.1 1301789 1304083 D KEGG: ajs:Ajs_2568 ribonuclease R; TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; Ribonuclease B OB region domain; SMART: RNA binding S1 domain protein; Cold shock protein; ribonuclease R 1301789..1304083 Acidovorax ebreus TPSY 7383144 YP_002552708.1 CDS Dtpsy_1241 NC_011992.1 1304092 1304880 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ajs:Ajs_2567 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1304092..1304880 Acidovorax ebreus TPSY 7383145 YP_002552709.1 CDS Dtpsy_1242 NC_011992.1 1304873 1305610 D KEGG: ajs:Ajs_2566 putative cytochrome c; putative cytochrome c 1304873..1305610 Acidovorax ebreus TPSY 7383146 YP_002552710.1 CDS Dtpsy_1243 NC_011992.1 1305607 1306881 D PFAM: cytochrome c class I; KEGG: ajs:Ajs_2565 cytochrome c, class I; Gluconate 2-dehydrogenase (acceptor) 1305607..1306881 Acidovorax ebreus TPSY 7383147 YP_002552711.1 CDS Dtpsy_1244 NC_011992.1 1306892 1307281 D KEGG: ajs:Ajs_2564 hypothetical protein; hypothetical protein 1306892..1307281 Acidovorax ebreus TPSY 7383148 YP_002552712.1 CDS Dtpsy_1245 NC_011992.1 1307472 1308065 D PFAM: protein of unknown function DUF150; KEGG: ajs:Ajs_2563 hypothetical protein; hypothetical protein 1307472..1308065 Acidovorax ebreus TPSY 7383149 YP_002552713.1 CDS Dtpsy_1246 NC_011992.1 1308135 1309619 D KEGG: ajs:Ajs_2562 NusA antitermination factor; TIGRFAM: transcription termination factor NusA; PFAM: NusA domain protein; SMART: RNA binding S1 domain protein; KH domain protein; NusA antitermination factor 1308135..1309619 Acidovorax ebreus TPSY 7383150 YP_002552714.1 CDS infB NC_011992.1 1309644 1312475 D Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 1309644..1312475 Acidovorax ebreus TPSY 7383151 YP_002552715.1 CDS rbfA NC_011992.1 1312488 1312865 D associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 1312488..1312865 Acidovorax ebreus TPSY 7383152 YP_002552716.1 CDS truB NC_011992.1 1312862 1313863 D catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 1312862..1313863 Acidovorax ebreus TPSY 7383153 YP_002552717.1 CDS Dtpsy_1250 NC_011992.1 1313860 1315689 D TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: ajs:Ajs_2558 GTP-binding protein TypA; GTP-binding protein TypA 1313860..1315689 Acidovorax ebreus TPSY 7383154 YP_002552718.1 CDS Dtpsy_1251 NC_011992.1 1315898 1316782 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: ajs:Ajs_2557 hypothetical protein; protein of unknown function DUF6 transmembrane 1315898..1316782 Acidovorax ebreus TPSY 7383155 YP_002552719.1 CDS Dtpsy_1252 NC_011992.1 1316779 1317870 D catalyzes the formation of 3-hydroxy-2-methylpropanoate from 3-hydroxy-2-methylpropanoyl-CoA; 3-hydroxyisobutyryl-CoA hydrolase 1316779..1317870 Acidovorax ebreus TPSY 7383156 YP_002552720.1 CDS Dtpsy_1253 NC_011992.1 1317821 1318660 R KEGG: ajs:Ajs_2555 putative transmembrane anti-sigma factor; putative transmembrane anti-sigma factor complement(1317821..1318660) Acidovorax ebreus TPSY 7383157 YP_002552721.1 CDS Dtpsy_1254 NC_011992.1 1318691 1319206 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: ajs:Ajs_2554 ECF subfamily RNA polymerase sigma-24 factor; RNA polymerase, sigma-24 subunit, ECF subfamily complement(1318691..1319206) Acidovorax ebreus TPSY 7383158 YP_002552722.1 CDS Dtpsy_1255 NC_011992.1 1319223 1319588 R PFAM: Secreted repeat of unknown function; KEGG: ajs:Ajs_2553 hypothetical protein; Secreted repeat of unknown function complement(1319223..1319588) Acidovorax ebreus TPSY 7383159 YP_002552723.1 CDS smpB NC_011992.1 1319687 1320160 R binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein complement(1319687..1320160) Acidovorax ebreus TPSY 7383160 YP_002552724.1 CDS Dtpsy_1257 NC_011992.1 1320275 1320715 D PFAM: cyclase/dehydrase; KEGG: ajs:Ajs_2551 cyclase/dehydrase; cyclase/dehydrase 1320275..1320715 Acidovorax ebreus TPSY 7383161 YP_002552725.1 CDS Dtpsy_1258 NC_011992.1 1320708 1321052 D PFAM: protein of unknown function UPF0125; KEGG: ajs:Ajs_2550 hypothetical protein; protein of unknown function UPF0125 1320708..1321052 Acidovorax ebreus TPSY 7383162 YP_002552726.1 CDS Dtpsy_1259 NC_011992.1 1321137 1321634 R KEGG: ajs:Ajs_2549 hypothetical protein; hypothetical protein complement(1321137..1321634) Acidovorax ebreus TPSY 7383163 YP_002552727.1 CDS Dtpsy_1260 NC_011992.1 1321740 1323215 D KEGG: ajs:Ajs_2548 inosine-5'-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain containing protein; IMP dehydrogenase/GMP reductase; 2-nitropropane dioxygenase NPD; SMART: CBS domain containing protein; inosine-5'-monophosphate dehydrogenase 1321740..1323215 Acidovorax ebreus TPSY 7383164 YP_002552728.1 CDS guaA NC_011992.1 1323293 1324909 D contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 1323293..1324909 Acidovorax ebreus TPSY 7383165 YP_002552729.1 CDS Dtpsy_1262 NC_011992.1 1325211 1326467 D PFAM: integrase family protein; KEGG: bam:Bamb_2021 phage integrase family protein; integrase family protein 1325211..1326467 Acidovorax ebreus TPSY 7383166 YP_002552730.1 CDS Dtpsy_1263 NC_011992.1 1326528 1326803 D KEGG: rme:Rmet_1466 hypothetical protein; hypothetical protein 1326528..1326803 Acidovorax ebreus TPSY 7383167 YP_002552731.1 CDS Dtpsy_1264 NC_011992.1 1326808 1327332 D PFAM: Prophage CP4-57 regulatory; KEGG: rme:Rmet_1467 prophage CP4-57 regulatory; phage transcriptional regulator, AlpA 1326808..1327332 Acidovorax ebreus TPSY 7383168 YP_002552732.1 CDS Dtpsy_1265 NC_011992.1 1327347 1327730 R PFAM: Prophage CP4-57 regulatory; KEGG: pmy:Pmen_3481 phage transcriptional regulator, AlpA; phage transcriptional regulator, AlpA complement(1327347..1327730) Acidovorax ebreus TPSY 7383169 YP_002552733.1 CDS Dtpsy_1266 NC_011992.1 1327999 1328466 D PFAM: Domain of unknown function DUF1863; KEGG: ajs:Ajs_2628 hypothetical protein; hypothetical protein 1327999..1328466 Acidovorax ebreus TPSY 7383170 YP_002552734.1 CDS Dtpsy_1267 NC_011992.1 1328466 1329092 D KEGG: ajs:Ajs_2629 hypothetical protein; hypothetical protein 1328466..1329092 Acidovorax ebreus TPSY 7383171 YP_002552735.1 CDS Dtpsy_1268 NC_011992.1 1329096 1330232 D KEGG: ajs:Ajs_2630 hypothetical protein; hypothetical protein 1329096..1330232 Acidovorax ebreus TPSY 7383172 YP_002552736.1 CDS Dtpsy_1269 NC_011992.1 1330229 1330891 D KEGG: ajs:Ajs_2631 hypothetical protein; hypothetical protein 1330229..1330891 Acidovorax ebreus TPSY 7383173 YP_002552737.1 CDS Dtpsy_1270 NC_011992.1 1330908 1331393 R PFAM: Domain of unknown function DUF1863; KEGG: ajs:Ajs_2632 hypothetical protein; hypothetical protein complement(1330908..1331393) Acidovorax ebreus TPSY 7383174 YP_002552738.1 CDS Dtpsy_1271 NC_011992.1 1331440 1332027 R KEGG: pca:Pcar_2915 hypothetical protein; hypothetical protein complement(1331440..1332027) Acidovorax ebreus TPSY 7383175 YP_002552739.1 CDS Dtpsy_1272 NC_011992.1 1332030 1333172 R KEGG: ajs:Ajs_2635 hypothetical protein; hypothetical protein complement(1332030..1333172) Acidovorax ebreus TPSY 7383176 YP_002552740.1 CDS Dtpsy_1273 NC_011992.1 1333561 1334067 D TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; KEGG: rso:RSc2620 hypothetical protein; DNA repair protein RadC 1333561..1334067 Acidovorax ebreus TPSY 7383177 YP_002552741.1 CDS Dtpsy_1274 NC_011992.1 1334344 1334694 D KEGG: bpt:Bpet2173 putative transposon; putative transposon 1334344..1334694 Acidovorax ebreus TPSY 7383178 YP_002552742.1 CDS Dtpsy_1275 NC_011992.1 1334723 1335388 R KEGG: xac:XAC2264 hypothetical protein; hypothetical protein complement(1334723..1335388) Acidovorax ebreus TPSY 7383179 YP_002552743.1 CDS Dtpsy_1276 NC_011992.1 1335912 1336736 D PFAM: protein of unknown function DUF932; KEGG: rme:Rmet_1244 protein of unknown function DUF932; protein of unknown function DUF932 1335912..1336736 Acidovorax ebreus TPSY 7383180 YP_002552744.1 CDS Dtpsy_1277 NC_011992.1 1336817 1338886 D PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; KEGG: bpt:Bpet2176 ParB-like nuclease; ParB domain protein nuclease 1336817..1338886 Acidovorax ebreus TPSY 7383181 YP_002552745.1 CDS Dtpsy_1278 NC_011992.1 1338949 1339158 D KEGG: dac:Daci_2732 hypothetical protein; hypothetical protein 1338949..1339158 Acidovorax ebreus TPSY 7382367 YP_002552746.1 CDS Dtpsy_1281 NC_011992.1 1340993 1341388 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rfr:Rfer_0383 glyoxalase; Glyoxalase/bleomycin resistance protein/dioxygenase 1340993..1341388 Acidovorax ebreus TPSY 7382370 YP_002552747.1 CDS Dtpsy_1282 NC_011992.1 1341773 1342621 R KEGG: rso:RSc2612 hypothetical protein; hypothetical protein complement(1341773..1342621) Acidovorax ebreus TPSY 7382371 YP_002552748.1 CDS Dtpsy_1283 NC_011992.1 1342643 1343206 R KEGG: rso:RSc2611 hypothetical protein; hypothetical protein complement(1342643..1343206) Acidovorax ebreus TPSY 7382372 YP_002552749.1 CDS Dtpsy_1284 NC_011992.1 1343215 1343505 R PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: rso:RSc2610 putative transcription regulator protein; helix-turn-helix domain protein complement(1343215..1343505) Acidovorax ebreus TPSY 7382373 YP_002552750.1 CDS Dtpsy_1285 NC_011992.1 1343748 1344098 D KEGG: ajs:Ajs_2650 putative lipoprotein; putative lipoprotein 1343748..1344098 Acidovorax ebreus TPSY 7382374 YP_002552751.1 CDS Dtpsy_1286 NC_011992.1 1344406 1345167 D KEGG: ajs:Ajs_2651 hypothetical protein; hypothetical protein 1344406..1345167 Acidovorax ebreus TPSY 7382375 YP_002552752.1 CDS Dtpsy_1287 NC_011992.1 1345251 1345532 D KEGG: rme:Rmet_1253 hypothetical protein; hypothetical protein 1345251..1345532 Acidovorax ebreus TPSY 7382376 YP_002552753.1 CDS Dtpsy_1288 NC_011992.1 1345559 1346416 D KEGG: rme:Rmet_1485 conserved hypothetical replication initiator and transcription repressor protein; conserved hypothetical replication initiator and transcription repressor protein 1345559..1346416 Acidovorax ebreus TPSY 7382377 YP_002552754.1 CDS Dtpsy_1289 NC_011992.1 1346670 1347308 D PFAM: Cobyrinic acid ac-diamide synthase; KEGG: rme:Rmet_1255 cobyrinic acid a,c-diamide synthase; Cobyrinic acid ac-diamide synthase 1346670..1347308 Acidovorax ebreus TPSY 7382378 YP_002552755.1 CDS Dtpsy_1290 NC_011992.1 1347305 1347568 D KEGG: rme:Rmet_1256 hypothetical protein; hypothetical protein 1347305..1347568 Acidovorax ebreus TPSY 7382379 YP_002552756.1 CDS Dtpsy_1291 NC_011992.1 1347565 1348110 D KEGG: bmj:BMULJ_00908 hypothetical protein; hypothetical protein 1347565..1348110 Acidovorax ebreus TPSY 7382380 YP_002552757.1 CDS Dtpsy_1292 NC_011992.1 1348107 1348706 D KEGG: rme:Rmet_1258 TraF peptidase. Serine peptidase. MEROPS family S26C; TraF peptidase. Serine peptidase. MEROPS family S26C 1348107..1348706 Acidovorax ebreus TPSY 7382381 YP_002552758.1 CDS Dtpsy_1293 NC_011992.1 1349155 1351128 D KEGG: pap:PSPA7_3726 hypothetical protein; hypothetical protein 1349155..1351128 Acidovorax ebreus TPSY 7382382 YP_002552759.1 CDS Dtpsy_1294 NC_011992.1 1351231 1353603 R PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: pla:Plav_3459 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase complement(1351231..1353603) Acidovorax ebreus TPSY 7382383 YP_002552760.1 CDS Dtpsy_1295 NC_011992.1 1353686 1354894 R TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: pla:Plav_3453 acetate kinase; acetate kinase complement(1353686..1354894) Acidovorax ebreus TPSY 7382384 YP_002552761.1 CDS Dtpsy_1296 NC_011992.1 1354949 1355302 R KEGG: rme:Rmet_1260 hypothetical protein; hypothetical protein complement(1354949..1355302) Acidovorax ebreus TPSY 7382385 YP_002552762.1 CDS Dtpsy_1297 NC_011992.1 1355471 1356670 R KEGG: rme:Rmet_1261 hypothetical protein; hypothetical protein complement(1355471..1356670) Acidovorax ebreus TPSY 7382386 YP_002552763.1 CDS Dtpsy_1298 NC_011992.1 1356667 1357533 R PFAM: conserved hypothetical protein; KEGG: rme:Rmet_1265 conserved hypothetical protein 730; hypothetical protein complement(1356667..1357533) Acidovorax ebreus TPSY 7382387 YP_002552764.1 CDS Dtpsy_1299 NC_011992.1 1357530 1358942 R PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: rme:Rmet_1266 beta-lactamase-like protein; beta-lactamase domain protein complement(1357530..1358942) Acidovorax ebreus TPSY 7382388 YP_002552765.1 CDS Dtpsy_1300 NC_011992.1 1358959 1359159 R KEGG: dsh:Dshi_2965 hypothetical protein; hypothetical protein complement(1358959..1359159) Acidovorax ebreus TPSY 7382389 YP_002552766.1 CDS Dtpsy_1301 NC_011992.1 1359180 1360724 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rme:Rmet_1267 RND efflux system, outer membrane lipoprotein, NodT; RND efflux system, outer membrane lipoprotein, NodT family complement(1359180..1360724) Acidovorax ebreus TPSY 7382390 YP_002552767.1 CDS Dtpsy_1302 NC_011992.1 1360721 1361839 R PFAM: ABC-2 type transporter; KEGG: rme:Rmet_1268 ABC-type multidrug transport system permease component; ABC-2 type transporter complement(1360721..1361839) Acidovorax ebreus TPSY 7382391 YP_002552768.1 CDS Dtpsy_1303 NC_011992.1 1361844 1363013 R PFAM: ABC-2 type transporter; KEGG: rme:Rmet_1269 ABC-type multidrug transport system permease component; ABC-2 type transporter complement(1361844..1363013) Acidovorax ebreus TPSY 7382392 YP_002552769.1 CDS Dtpsy_1304 NC_011992.1 1363010 1364782 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: oca:OCAR_4859 ATPase component ABC-type multidrug transport system; ABC transporter related complement(1363010..1364782) Acidovorax ebreus TPSY 7382393 YP_002552770.1 CDS Dtpsy_1305 NC_011992.1 1364784 1365824 R PFAM: secretion protein HlyD family protein; KEGG: oca:OCAR_4860 secretion protein HlyD family protein; hypothetical protein complement(1364784..1365824) Acidovorax ebreus TPSY 7382394 YP_002552771.1 CDS Dtpsy_1306 NC_011992.1 1365852 1366271 R KEGG: pde:Pden_3298 hypothetical protein; hypothetical protein complement(1365852..1366271) Acidovorax ebreus TPSY 7382395 YP_002552772.1 CDS Dtpsy_1307 NC_011992.1 1366340 1366948 R PFAM: regulatory protein TetR; KEGG: oca:OCAR_4861 transcriptional regulator of TetR family protein; transcriptional regulator, TetR family complement(1366340..1366948) Acidovorax ebreus TPSY 7382396 YP_002552773.1 CDS Dtpsy_1308 NC_011992.1 1367270 1369027 D PFAM: alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: oca:OCAR_4862 poly-beta-hydroxybutyrate polymerase; Poly-beta-hydroxybutyrate polymerase domain protein 1367270..1369027 Acidovorax ebreus TPSY 7382397 YP_002552774.1 CDS Dtpsy_1309 NC_011992.1 1369135 1369578 D KEGG: rme:Rmet_1332 hypothetical protein; hypothetical protein 1369135..1369578 Acidovorax ebreus TPSY 7382398 YP_002552775.1 CDS Dtpsy_1310 NC_011992.1 1369589 1370335 D TIGRFAM: acetoacetyl-CoA reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rme:Rmet_1333 acetoacetyl-CoA reductase; acetoacetyl-CoA reductase 1369589..1370335 Acidovorax ebreus TPSY 7382399 YP_002552776.1 CDS Dtpsy_1311 NC_011992.1 1370404 1370967 D PFAM: UspA domain protein; KEGG: rme:Rmet_1334 UspA; UspA domain protein 1370404..1370967 Acidovorax ebreus TPSY 7382400 YP_002552777.1 CDS Dtpsy_1312 NC_011992.1 1370960 1371913 D PFAM: phosphate acetyl/butaryl transferase; KEGG: dac:Daci_0755 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; Phosphate butyryltransferase 1370960..1371913 Acidovorax ebreus TPSY 7382401 YP_002552778.1 CDS Dtpsy_1313 NC_011992.1 1372008 1374026 D KEGG: pla:Plav_3441 hypothetical protein; hypothetical protein 1372008..1374026 Acidovorax ebreus TPSY 7382402 YP_002552779.1 CDS Dtpsy_1314 NC_011992.1 1374218 1375144 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: dac:Daci_2703 LysR family transcriptional regulator; transcriptional regulator, LysR family 1374218..1375144 Acidovorax ebreus TPSY 7382403 YP_002552780.1 CDS Dtpsy_1315 NC_011992.1 1375158 1375385 D KEGG: dac:Daci_0441 hypothetical protein; hypothetical protein 1375158..1375385 Acidovorax ebreus TPSY 7382404 YP_002552781.1 CDS Dtpsy_1316 NC_011992.1 1375630 1377642 D PFAM: TRAG family protein; KEGG: bpt:Bpet2204 conjugal transfer protein TraG; TRAG family protein 1375630..1377642 Acidovorax ebreus TPSY 7382405 YP_002552782.1 CDS Dtpsy_1317 NC_011992.1 1377639 1378025 D PFAM: Conjugal transfer protein TrbC; KEGG: shn:Shewana3_1283 conjugal transfer protein TrbC; Conjugal transfer protein TrbC 1377639..1378025 Acidovorax ebreus TPSY 7382406 YP_002552783.1 CDS Dtpsy_1318 NC_011992.1 1378022 1378294 D KEGG: dac:Daci_0436 putative conjugal transfer TrbD transmembrane protein; putative conjugal transfer TrbD transmembrane protein 1378022..1378294 Acidovorax ebreus TPSY 7382407 YP_002552784.1 CDS Dtpsy_1319 NC_011992.1 1378305 1380764 D type IV secretion system VirB4 family; conjugal transfer ATPase TrbE 1378305..1380764 Acidovorax ebreus TPSY 7382408 YP_002552785.1 CDS Dtpsy_1320 NC_011992.1 1380761 1381501 D TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: rme:Rmet_1345 putative conjugal transfer TrbJ signal peptide protein; conjugal transfer protein TrbJ 1380761..1381501 Acidovorax ebreus TPSY 7382409 YP_002552786.1 CDS Dtpsy_1321 NC_011992.1 1381514 1381846 D KEGG: pap:PSPA7_3701 putative lipoprotein; putative lipoprotein 1381514..1381846 Acidovorax ebreus TPSY 7382410 YP_002552787.1 CDS Dtpsy_1322 NC_011992.1 1381843 1383222 D type IV secretion VirB6 family; conjugal transfer protein TrbL 1381843..1383222 Acidovorax ebreus TPSY 7382411 YP_002552788.1 CDS Dtpsy_1323 NC_011992.1 1383247 1383951 D PFAM: Conjugal transfer protein; KEGG: rme:Rmet_1348 conjugal transfer protein; conjugal transfer protein TrbF 1383247..1383951 Acidovorax ebreus TPSY 7382412 YP_002552789.1 CDS Dtpsy_1324 NC_011992.1 1383948 1384937 D TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: bmj:BMULJ_00883 type IV secretion system protein; P-type conjugative transfer protein TrbG 1383948..1384937 Acidovorax ebreus TPSY 7382413 YP_002552790.1 CDS Dtpsy_1325 NC_011992.1 1384940 1386223 D PFAM: conjugation TrbI family protein; KEGG: rpi:Rpic_2653 conjugation TrbI family protein; conjugation TrbI family protein 1384940..1386223 Acidovorax ebreus TPSY 7382414 YP_002552791.1 CDS Dtpsy_1326 NC_011992.1 1386220 1386456 D KEGG: aav:Aave_0736 hypothetical protein; hypothetical protein 1386220..1386456 Acidovorax ebreus TPSY 7382415 YP_002552792.1 CDS Dtpsy_1327 NC_011992.1 1386681 1387406 R KEGG: dar:Daro_1737 hypothetical protein; hypothetical protein complement(1386681..1387406) Acidovorax ebreus TPSY 7382416 YP_002552793.1 CDS Dtpsy_1328 NC_011992.1 1387580 1388626 R PFAM: Domain of unknown function DUF1814; KEGG: mpo:Mpop_3057 protein of unknown function DUF1814; hypothetical protein complement(1387580..1388626) Acidovorax ebreus TPSY 7382417 YP_002552794.1 CDS Dtpsy_1329 NC_011992.1 1388619 1389215 R KEGG: pla:Plav_3511 hypothetical protein; hypothetical protein complement(1388619..1389215) Acidovorax ebreus TPSY 7382418 YP_002552795.1 CDS Dtpsy_1330 NC_011992.1 1389382 1390029 D KEGG: bbr:BB2494 phage-like hypothetical protein; phage-like hypothetical protein 1389382..1390029 Acidovorax ebreus TPSY 7382419 YP_002552796.1 CDS Dtpsy_1331 NC_011992.1 1390026 1391231 D PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; SMART: helix-turn-helix domain protein; KEGG: bbr:BB2493 putative phage-related DNA-binding protein; protein of unknown function DUF955 1390026..1391231 Acidovorax ebreus TPSY 7382420 YP_002552797.1 CDS Dtpsy_1332 NC_011992.1 1391462 1393717 D PFAM: stem cell self-renewal protein Piwi domain protein; KEGG: pth:PTH_0723 hypothetical protein; stem cell self-renewal protein Piwi domain protein 1391462..1393717 Acidovorax ebreus TPSY 7382421 YP_002552798.1 CDS Dtpsy_1333 NC_011992.1 1393732 1394928 D KEGG: sfu:Sfum_2482 hypothetical protein; hypothetical protein 1393732..1394928 Acidovorax ebreus TPSY 7382422 YP_002552799.1 CDS Dtpsy_1334 NC_011992.1 1395917 1396543 D KEGG: aav:Aave_1218 putative transmembrane protein; hypothetical protein 1395917..1396543 Acidovorax ebreus TPSY 7382423 YP_002552800.1 CDS Dtpsy_1335 NC_011992.1 1396768 1397811 D KEGG: ajs:Ajs_2524 Ku domain-containing protein; TIGRFAM: Ku protein; PFAM: Ku domain protein; SMART: Ku domain protein; Ku protein 1396768..1397811 Acidovorax ebreus TPSY 7382424 YP_002552801.1 CDS Dtpsy_1337 NC_011992.1 1400017 1401105 D PFAM: transposase IS4 family protein; KEGG: ajs:Ajs_3918 transposase, IS4 family protein; transposase IS4 family protein 1400017..1401105 Acidovorax ebreus TPSY 7382426 YP_002552802.1 CDS Dtpsy_1338 NC_011992.1 1401883 1402794 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ajs:Ajs_2522 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1401883..1402794 Acidovorax ebreus TPSY 7382427 YP_002552803.1 CDS Dtpsy_1339 NC_011992.1 1402967 1404499 D KEGG: ajs:Ajs_2521 glutamate-cysteine ligase; TIGRFAM: glutamate/cysteine ligase; PFAM: glutamate--cysteine ligase; glutamate/cysteine ligase 1402967..1404499 Acidovorax ebreus TPSY 7382428 YP_002552804.1 CDS Dtpsy_1340 NC_011992.1 1404669 1406366 R PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: ajs:Ajs_2520 acetolactate synthase 2 catalytic subunit; thiamine pyrophosphate protein complement(1404669..1406366) Acidovorax ebreus TPSY 7382429 YP_002552805.1 CDS Dtpsy_1341 NC_011992.1 1406580 1407497 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_2519 LysR family transcriptional regulator; transcriptional regulator, LysR family 1406580..1407497 Acidovorax ebreus TPSY 7382430 YP_002552806.1 CDS Dtpsy_1342 NC_011992.1 1407544 1408746 R PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_2518 major facilitator superfamily transporter; major facilitator superfamily MFS_1 complement(1407544..1408746) Acidovorax ebreus TPSY 7382431 YP_002552807.1 CDS Dtpsy_1343 NC_011992.1 1408727 1409809 R TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: ajs:Ajs_2517 arsenical-resistance protein; arsenical-resistance protein complement(1408727..1409809) Acidovorax ebreus TPSY 7382432 YP_002552808.1 CDS Dtpsy_1344 NC_011992.1 1409811 1410308 R PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: ajs:Ajs_2516 protein tyrosine phosphatase; Protein-tyrosine phosphatase, low molecular weight complement(1409811..1410308) Acidovorax ebreus TPSY 7382433 YP_002552809.1 CDS Dtpsy_1345 NC_011992.1 1410326 1410811 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ajs:Ajs_2515 glyoxalase/bleomycin resistance protein/dioxygenase; Glyoxalase/bleomycin resistance protein/dioxygenase complement(1410326..1410811) Acidovorax ebreus TPSY 7382434 YP_002552810.1 CDS Dtpsy_1346 NC_011992.1 1410834 1411157 R SMART: regulatory protein ArsR; KEGG: ajs:Ajs_2514 ArsR family transcriptional regulator; putative transcriptional regulator, ArsR family complement(1410834..1411157) Acidovorax ebreus TPSY 7382435 YP_002552811.1 CDS Dtpsy_1347 NC_011992.1 1411271 1413031 D KEGG: ajs:Ajs_2513 arsenite-activated ATPase ArsA; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; SMART: AAA ATPase; arsenite-activated ATPase ArsA 1411271..1413031 Acidovorax ebreus TPSY 7382436 YP_002552812.1 CDS Dtpsy_1348 NC_011992.1 1413104 1413313 R KEGG: ajs:Ajs_2512 hypothetical protein; hypothetical protein complement(1413104..1413313) Acidovorax ebreus TPSY 7382437 YP_002552813.1 CDS Dtpsy_1349 NC_011992.1 1413329 1413550 R KEGG: ajs:Ajs_2511 hypothetical protein; hypothetical protein complement(1413329..1413550) Acidovorax ebreus TPSY 7382438 YP_002552814.1 CDS Dtpsy_1350 NC_011992.1 1413606 1414565 D TIGRFAM: GTP-binding protein HSR1-related; PFAM: GTP-binding protein HSR1-related; KEGG: ajs:Ajs_2510 GTP-binding protein, HSR1-related; GTP-binding protein HSR1-related 1413606..1414565 Acidovorax ebreus TPSY 7382439 YP_002552815.1 CDS Dtpsy_1351 NC_011992.1 1414609 1415082 R PFAM: OsmC family protein; KEGG: ajs:Ajs_2509 OsmC family protein; OsmC family protein complement(1414609..1415082) Acidovorax ebreus TPSY 7382440 YP_002552816.1 CDS Dtpsy_1352 NC_011992.1 1415168 1417147 R KEGG: ajs:Ajs_2508 hypothetical protein; hypothetical protein complement(1415168..1417147) Acidovorax ebreus TPSY 7382441 YP_002552817.1 CDS Dtpsy_1353 NC_011992.1 1417327 1417536 R KEGG: ajs:Ajs_2507 hypothetical protein; hypothetical protein complement(1417327..1417536) Acidovorax ebreus TPSY 7382442 YP_002552818.1 CDS Dtpsy_1354 NC_011992.1 1417591 1418160 R PFAM: MgtC/SapB transporter; KEGG: ajs:Ajs_2506 MgtC/SapB transporter; MgtC/SapB transporter complement(1417591..1418160) Acidovorax ebreus TPSY 7382443 YP_002552819.1 CDS Dtpsy_1355 NC_011992.1 1418385 1419191 R PFAM: pseudouridine synthase; KEGG: ajs:Ajs_2505 tRNA pseudouridine synthase C; pseudouridine synthase complement(1418385..1419191) Acidovorax ebreus TPSY 7382444 YP_002552820.1 CDS Dtpsy_1356 NC_011992.1 1419188 1419475 R KEGG: ajs:Ajs_2504 hypothetical protein; hypothetical protein complement(1419188..1419475) Acidovorax ebreus TPSY 7382445 YP_002552821.1 CDS Dtpsy_1357 NC_011992.1 1419587 1419856 R KEGG: ajs:Ajs_2503 hypothetical protein; hypothetical protein complement(1419587..1419856) Acidovorax ebreus TPSY 7382446 YP_002552822.1 CDS Dtpsy_1358 NC_011992.1 1419995 1420942 D PFAM: phosphoesterase DHHA1; KEGG: ajs:Ajs_2502 phosphoesterase, DHHA1; phosphoesterase DHHA1 1419995..1420942 Acidovorax ebreus TPSY 7382447 YP_002552823.1 CDS Dtpsy_1359 NC_011992.1 1421002 1421577 R PFAM: nuclease (SNase domain protein); SMART: nuclease (SNase domain protein); KEGG: ajs:Ajs_2501 nuclease; nuclease (SNase domain protein) complement(1421002..1421577) Acidovorax ebreus TPSY 7384314 YP_002552824.1 CDS Dtpsy_1360 NC_011992.1 1421936 1422838 D TIGRFAM: RarD protein, DMT superfamily transporter; KEGG: ajs:Ajs_2500 transporter DMT superfamily protein; RarD protein, DMT superfamily transporter 1421936..1422838 Acidovorax ebreus TPSY 7382612 YP_002552825.1 CDS Dtpsy_1361 NC_011992.1 1422927 1423601 D KEGG: ajs:Ajs_2499 hypothetical protein; hypothetical protein 1422927..1423601 Acidovorax ebreus TPSY 7382613 YP_002552826.1 CDS Dtpsy_1362 NC_011992.1 1423663 1424703 R PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; KEGG: ajs:Ajs_2498 Sel1 domain-containing protein; Sel1 domain protein repeat-containing protein complement(1423663..1424703) Acidovorax ebreus TPSY 7382614 YP_002552827.1 CDS Dtpsy_1363 NC_011992.1 1424806 1425456 R PFAM: pseudouridine synthase; KEGG: ajs:Ajs_2497 ribosomal large subunit pseudouridine synthase E; pseudouridine synthase complement(1424806..1425456) Acidovorax ebreus TPSY 7382615 YP_002552828.1 CDS Dtpsy_1364 NC_011992.1 1425453 1426244 R PFAM: Peptidase M23; KEGG: ajs:Ajs_2496 peptidase M23B; Peptidase M23 complement(1425453..1426244) Acidovorax ebreus TPSY 7382616 YP_002552829.1 CDS Dtpsy_1365 NC_011992.1 1426606 1428060 D PFAM: fumarate lyase; delta crystallin domain protein; KEGG: har:HEAR0768 aspartate ammonia-lyase (aspartase); fumarate lyase 1426606..1428060 Acidovorax ebreus TPSY 7382617 YP_002552830.1 CDS Dtpsy_1366 NC_011992.1 1428295 1428858 R TIGRFAM: phasin family protein; PFAM: Phasin family protein; KEGG: ajs:Ajs_2494 phasin family protein; phasin family protein complement(1428295..1428858) Acidovorax ebreus TPSY 7382618 YP_002552831.1 CDS Dtpsy_1367 NC_011992.1 1429124 1429612 D PFAM: thioesterase superfamily protein; KEGG: ajs:Ajs_2493 thioesterase superfamily protein; thioesterase superfamily protein 1429124..1429612 Acidovorax ebreus TPSY 7382619 YP_002552832.1 CDS Dtpsy_1368 NC_011992.1 1429792 1430988 D catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 1429792..1430988 Acidovorax ebreus TPSY 7382620 YP_002552833.1 CDS Dtpsy_1369 NC_011992.1 1431053 1432468 D KEGG: ajs:Ajs_2491 putative transmembrane protein; putative transmembrane protein 1431053..1432468 Acidovorax ebreus TPSY 7382621 YP_002552834.1 CDS Dtpsy_1370 NC_011992.1 1432548 1433528 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: ajs:Ajs_2490 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding 1432548..1433528 Acidovorax ebreus TPSY 7382622 YP_002552835.1 CDS Dtpsy_1371 NC_011992.1 1433592 1435292 D PFAM: protein of unknown function DUF195; KEGG: ajs:Ajs_2489 hypothetical protein; protein of unknown function DUF195 1433592..1435292 Acidovorax ebreus TPSY 7382623 YP_002552836.1 CDS Dtpsy_1372 NC_011992.1 1435294 1436481 D PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_2488 major facilitator superfamily transporter; major facilitator superfamily MFS_1 1435294..1436481 Acidovorax ebreus TPSY 7382624 YP_002552837.1 CDS Dtpsy_1373 NC_011992.1 1436536 1437399 R PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_2487 hypothetical protein; hypothetical protein complement(1436536..1437399) Acidovorax ebreus TPSY 7382625 YP_002552838.1 CDS Dtpsy_1374 NC_011992.1 1437531 1437926 R may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB complement(1437531..1437926) Acidovorax ebreus TPSY 7382626 YP_002552839.1 CDS Dtpsy_1375 NC_011992.1 1437969 1439273 R TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: ajs:Ajs_2485 TRAP dicarboxylate transporter, DctM subunit; TRAP dicarboxylate transporter, DctM subunit complement(1437969..1439273) Acidovorax ebreus TPSY 7382627 YP_002552840.1 CDS Dtpsy_1376 NC_011992.1 1439289 1439798 R PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: ajs:Ajs_2484 tripartite ATP-independent periplasmic transporter DctQ; Tripartite ATP-independent periplasmic transporter DctQ component complement(1439289..1439798) Acidovorax ebreus TPSY 7382628 YP_002552841.1 CDS Dtpsy_1377 NC_011992.1 1439838 1440815 R PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: ajs:Ajs_2483 TRAP dicarboxylate transporter-DctP subunit; TRAP dicarboxylate transporter- DctP subunit complement(1439838..1440815) Acidovorax ebreus TPSY 7382629 YP_002552842.1 CDS Dtpsy_1378 NC_011992.1 1441019 1441591 D KEGG: ajs:Ajs_2482 putative transcriptional regulator; putative transcriptional regulator 1441019..1441591 Acidovorax ebreus TPSY 7382630 YP_002552843.1 CDS Dtpsy_1379 NC_011992.1 1441637 1443460 R KEGG: ajs:Ajs_2481 hypothetical protein; hypothetical protein complement(1441637..1443460) Acidovorax ebreus TPSY 7382631 YP_002552844.1 CDS Dtpsy_1380 NC_011992.1 1443580 1447299 D PFAM: Hydantoinase/oxoprolinase; Hydantoinase B/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: ajs:Ajs_2480 5-oxoprolinase (ATP-hydrolyzing); 5-oxoprolinase (ATP-hydrolyzing) 1443580..1447299 Acidovorax ebreus TPSY 7382632 YP_002552845.1 CDS Dtpsy_1381 NC_011992.1 1447370 1447738 R PFAM: Na+/H+ antiporter subunit; KEGG: ajs:Ajs_2479 Na+/H+ antiporter subunit; Na+/H+ antiporter subunit complement(1447370..1447738) Acidovorax ebreus TPSY 7382633 YP_002552846.1 CDS Dtpsy_1382 NC_011992.1 1447735 1448016 R PFAM: multiple resistance and pH regulation protein F; KEGG: ajs:Ajs_2478 multiple resistance and pH regulation protein F; multiple resistance and pH regulation protein F complement(1447735..1448016) Acidovorax ebreus TPSY 7382634 YP_002552847.1 CDS Dtpsy_1383 NC_011992.1 1448013 1448504 R subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; putative monovalent cation/H+ antiporter subunit E complement(1448013..1448504) Acidovorax ebreus TPSY 7382635 YP_002552848.1 CDS Dtpsy_1384 NC_011992.1 1448501 1450237 R subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; putative monovalent cation/H+ antiporter subunit D complement(1448501..1450237) Acidovorax ebreus TPSY 7382636 YP_002552849.1 CDS Dtpsy_1385 NC_011992.1 1450234 1450599 R subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit C complement(1450234..1450599) Acidovorax ebreus TPSY 7382637 YP_002552850.1 CDS Dtpsy_1386 NC_011992.1 1450599 1453553 R subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+; putative monovalent cation/H+ antiporter subunit A complement(1450599..1453553) Acidovorax ebreus TPSY 7382638 YP_002552851.1 CDS Dtpsy_1387 NC_011992.1 1453665 1454009 R KEGG: ajs:Ajs_2473 hypothetical protein; hypothetical protein complement(1453665..1454009) Acidovorax ebreus TPSY 7382639 YP_002552852.1 CDS Dtpsy_1388 NC_011992.1 1454018 1455175 R PFAM: Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: ajs:Ajs_2472 hypothetical protein; tetratricopeptide repeat protein complement(1454018..1455175) Acidovorax ebreus TPSY 7382640 YP_002552853.1 CDS Dtpsy_1389 NC_011992.1 1455165 1455491 R KEGG: ajs:Ajs_2471 hypothetical protein; hypothetical protein complement(1455165..1455491) Acidovorax ebreus TPSY 7382641 YP_002552854.1 CDS Dtpsy_1390 NC_011992.1 1455621 1455932 R KEGG: ajs:Ajs_2470 integration host factor, beta subunit; TIGRFAM: integration host factor, beta subunit; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; integration host factor, beta subunit complement(1455621..1455932) Acidovorax ebreus TPSY 7382642 YP_002552855.1 CDS rpsA NC_011992.1 1456054 1457739 R in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 complement(1456054..1457739) Acidovorax ebreus TPSY 7382643 YP_002552856.1 CDS Dtpsy_1392 NC_011992.1 1457913 1459934 R catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; catalyzes CMP phosphorylation; bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidine monophosphate kinase complement(1457913..1459934) Acidovorax ebreus TPSY 7382644 YP_002552857.1 CDS Dtpsy_1393 NC_011992.1 1459934 1460818 R PFAM: Prephenate dehydrogenase; NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: ajs:Ajs_2467 prephenate dehydrogenase; Prephenate dehydrogenase complement(1459934..1460818) Acidovorax ebreus TPSY 7382645 YP_002552858.1 CDS Dtpsy_1394 NC_011992.1 1460828 1461943 R TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase; amino acid-binding ACT domain protein; KEGG: ajs:Ajs_2466 chorismate mutase / prephenate dehydratase; chorismate mutase complement(1460828..1461943) Acidovorax ebreus TPSY 7382646 YP_002552859.1 CDS Dtpsy_1395 NC_011992.1 1462060 1463175 R catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase complement(1462060..1463175) Acidovorax ebreus TPSY 7382647 YP_002552860.1 CDS Dtpsy_1396 NC_011992.1 1463239 1465872 R negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A complement(1463239..1465872) Acidovorax ebreus TPSY 7382648 YP_002552861.1 CDS Dtpsy_1397 NC_011992.1 1466099 1466755 D PFAM: OmpA/MotB domain protein; KEGG: ajs:Ajs_2463 OmpA/MotB domain-containing protein; OmpA/MotB domain protein 1466099..1466755 Acidovorax ebreus TPSY 7382649 YP_002552862.1 CDS Dtpsy_1398 NC_011992.1 1466835 1467548 D Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase 1466835..1467548 Acidovorax ebreus TPSY 7382650 YP_002552863.1 CDS Dtpsy_1399 NC_011992.1 1467545 1468222 D TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ajs:Ajs_2461 phosphoglycolate phosphatase; phosphoglycolate phosphatase 1467545..1468222 Acidovorax ebreus TPSY 7382651 YP_002552864.1 CDS Dtpsy_1401 NC_011992.1 1469504 1471063 R PFAM: transposase IS66; KEGG: rfr:Rfer_3059 transposase IS66; transposase IS66 complement(1469504..1471063) Acidovorax ebreus TPSY 7382654 YP_002552865.1 CDS Dtpsy_1402 NC_011992.1 1471138 1471470 R PFAM: IS66 Orf2 family protein; KEGG: aav:Aave_0711 IS66 Orf2 family protein; IS66 Orf2 family protein complement(1471138..1471470) Acidovorax ebreus TPSY 7382655 YP_002552866.1 CDS Dtpsy_1403 NC_011992.1 1471467 1471805 R PFAM: transposase IS3/IS911 family protein; KEGG: pna:Pnap_4707 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein complement(1471467..1471805) Acidovorax ebreus TPSY 7382656 YP_002552867.1 CDS Dtpsy_1404 NC_011992.1 1472919 1473500 D PFAM: regulatory protein TetR; KEGG: ajs:Ajs_2441 TetR family transcriptional regulator; transcriptional regulator, TetR family 1472919..1473500 Acidovorax ebreus TPSY 7382657 YP_002552868.1 CDS Dtpsy_1405 NC_011992.1 1473671 1474291 D PFAM: Negative transcriptional regulator; KEGG: ajs:Ajs_2440 negative transcriptional regulator; FMN-binding negative transcriptional regulator 1473671..1474291 Acidovorax ebreus TPSY 7382658 YP_002552869.1 CDS Dtpsy_1406 NC_011992.1 1474703 1475275 D KEGG: ajs:Ajs_2439 hypothetical protein; hypothetical protein 1474703..1475275 Acidovorax ebreus TPSY 7382659 YP_002552870.1 CDS Dtpsy_1407 NC_011992.1 1475280 1475903 R PFAM: protein of unknown function DUF599; KEGG: ajs:Ajs_2438 hypothetical protein; protein of unknown function DUF599 complement(1475280..1475903) Acidovorax ebreus TPSY 7382660 YP_002552871.1 CDS Dtpsy_1408 NC_011992.1 1476001 1476423 R PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: ajs:Ajs_2437 protein of unknown function DUF395, YeeE/YedE; protein of unknown function DUF395 YeeE/YedE complement(1476001..1476423) Acidovorax ebreus TPSY 7382661 YP_002552872.1 CDS Dtpsy_1409 NC_011992.1 1476446 1476889 R PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: ajs:Ajs_2436 protein of unknown function DUF395, YeeE/YedE; protein of unknown function DUF395 YeeE/YedE complement(1476446..1476889) Acidovorax ebreus TPSY 7382662 YP_002552873.1 CDS Dtpsy_1410 NC_011992.1 1476894 1477217 R PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: ajs:Ajs_2435 ArsR family transcriptional regulator; transcriptional regulator, ArsR family complement(1476894..1477217) Acidovorax ebreus TPSY 7382663 YP_002552874.1 CDS Dtpsy_1411 NC_011992.1 1477325 1478227 D PFAM: beta-lactamase domain protein; KEGG: ajs:Ajs_2434 beta-lactamase domain-containing protein; beta-lactamase domain protein 1477325..1478227 Acidovorax ebreus TPSY 7382664 YP_002552875.1 CDS Dtpsy_1412 NC_011992.1 1478266 1479057 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: ajs:Ajs_2433 redoxin domain-containing protein; Redoxin domain protein complement(1478266..1479057) Acidovorax ebreus TPSY 7382665 YP_002552876.1 CDS Dtpsy_1413 NC_011992.1 1479107 1480567 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ajs:Ajs_2432 integral membrane sensor signal transduction histidine kinase; histidine kinase complement(1479107..1480567) Acidovorax ebreus TPSY 7382666 YP_002552877.1 CDS Dtpsy_1414 NC_011992.1 1480564 1481241 R PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: ajs:Ajs_2431 two component transcriptional regulator; two component transcriptional regulator, winged helix family complement(1480564..1481241) Acidovorax ebreus TPSY 7382667 YP_002552878.1 CDS Dtpsy_1415 NC_011992.1 1481351 1483036 D PFAM: VRR-NUC domain protein; KEGG: ajs:Ajs_2429 hypothetical protein; VRR-NUC domain protein 1481351..1483036 Acidovorax ebreus TPSY 7382668 YP_002552879.1 CDS Dtpsy_1416 NC_011992.1 1483033 1485600 D SMART: helicase c2; KEGG: ajs:Ajs_2428 helicase C2; helicase c2 1483033..1485600 Acidovorax ebreus TPSY 7382669 YP_002552880.1 CDS Dtpsy_1417 NC_011992.1 1486318 1487289 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: fgenesh4_pg.C_scaffold_19680000001.; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding complement(1486318..1487289) Acidovorax ebreus TPSY 7382670 YP_002552881.1 CDS Dtpsy_1418 NC_011992.1 1487307 1488107 R TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rme:Rmet_2993 phosphonate uptake transporter; phosphonate ABC transporter, inner membrane subunit complement(1487307..1488107) Acidovorax ebreus TPSY 7382671 YP_002552882.1 CDS Dtpsy_1419 NC_011992.1 1488104 1488979 R TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: rme:Rmet_2994 phosphonate-binding periplasmic protein; phosphonate ABC transporter, periplasmic phosphonate-binding protein complement(1488104..1488979) Acidovorax ebreus TPSY 7382672 YP_002552883.1 CDS Dtpsy_1420 NC_011992.1 1488973 1489794 R KEGG: rme:Rmet_2995 phosphonate ABC transporter PhnC, ATP-binding; TIGRFAM: phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; phosphonate ABC transporter, ATPase subunit complement(1488973..1489794) Acidovorax ebreus TPSY 7382673 YP_002552884.1 CDS Dtpsy_1421 NC_011992.1 1489984 1490871 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: dac:Daci_2677 LysR family transcriptional regulator; transcriptional regulator, LysR family 1489984..1490871 Acidovorax ebreus TPSY 7382674 YP_002552885.1 CDS Dtpsy_1423 NC_011992.1 1491425 1494619 R PFAM: molydopterin dinucleotide-binding region; KEGG: ajs:Ajs_2424 molydopterin dinucleotide-binding region; molydopterin dinucleotide-binding region complement(1491425..1494619) Acidovorax ebreus TPSY 7382676 YP_002552886.1 CDS Dtpsy_1424 NC_011992.1 1494720 1495766 R PFAM: Polysulphide reductase NrfD; KEGG: ajs:Ajs_2423 polysulphide reductase, NrfD; Polysulphide reductase NrfD complement(1494720..1495766) Acidovorax ebreus TPSY 7382677 YP_002552887.1 CDS Dtpsy_1425 NC_011992.1 1495784 1496566 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ajs:Ajs_2422 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein complement(1495784..1496566) Acidovorax ebreus TPSY 7382678 YP_002552888.1 CDS Dtpsy_1426 NC_011992.1 1496982 1497587 D KEGG: ajs:Ajs_2421 2',5' RNA ligase; 2',5' RNA ligase 1496982..1497587 Acidovorax ebreus TPSY 7382679 YP_002552889.1 CDS Dtpsy_1427 NC_011992.1 1497653 1501375 R TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Proline dehydrogenase; Aldehyde Dehydrogenase; KEGG: ajs:Ajs_2420 delta-1-pyrroline-5-carboxylate dehydrogenase / L-proline dehydrogenase; delta-1-pyrroline-5-carboxylate dehydrogenase complement(1497653..1501375) Acidovorax ebreus TPSY 7382680 YP_002552890.1 CDS Dtpsy_1428 NC_011992.1 1501448 1501927 D PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: ajs:Ajs_2419 AsnC family transcriptional regulator; transcriptional regulator, AsnC family 1501448..1501927 Acidovorax ebreus TPSY 7382681 YP_002552891.1 CDS Dtpsy_1429 NC_011992.1 1501984 1502331 R KEGG: ajs:Ajs_2418 hypothetical protein; hypothetical protein complement(1501984..1502331) Acidovorax ebreus TPSY 7382682 YP_002552892.1 CDS Dtpsy_1430 NC_011992.1 1502484 1502963 R KEGG: ajs:Ajs_2417 hypothetical protein; hypothetical protein complement(1502484..1502963) Acidovorax ebreus TPSY 7382683 YP_002552893.1 CDS Dtpsy_1431 NC_011992.1 1503100 1503570 R KEGG: ajs:Ajs_2416 hypothetical protein; hypothetical protein complement(1503100..1503570) Acidovorax ebreus TPSY 7382684 YP_002552894.1 CDS Dtpsy_1432 NC_011992.1 1503567 1504022 R KEGG: rfr:Rfer_4147 putative transmembrane transcriptional regulator (anti-sigma factor); putative transmembrane anti-sigma factor complement(1503567..1504022) Acidovorax ebreus TPSY 7382685 YP_002552895.1 CDS Dtpsy_1433 NC_011992.1 1504038 1504592 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: ajs:Ajs_2415 ECF subfamily RNA polymerase sigma-24 factor; RNA polymerase, sigma-24 subunit, ECF subfamily complement(1504038..1504592) Acidovorax ebreus TPSY 7382686 YP_002552896.1 CDS Dtpsy_1434 NC_011992.1 1504730 1505056 D KEGG: ajs:Ajs_2414 hypothetical protein; hypothetical protein 1504730..1505056 Acidovorax ebreus TPSY 7382687 YP_002552897.1 CDS rumA NC_011992.1 1505106 1506554 D in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]; 23S rRNA 5-methyluridine methyltransferase 1505106..1506554 Acidovorax ebreus TPSY 7382688 YP_002552898.1 CDS Dtpsy_1436 NC_011992.1 1506631 1507017 R KEGG: ajs:Ajs_2412 hypothetical protein; hypothetical protein complement(1506631..1507017) Acidovorax ebreus TPSY 7382689 YP_002552899.1 CDS Dtpsy_1437 NC_011992.1 1507131 1507823 R PFAM: protein of unknown function UPF0005; KEGG: ajs:Ajs_2411 hypothetical protein; protein of unknown function UPF0005 complement(1507131..1507823) Acidovorax ebreus TPSY 7382690 YP_002552900.1 CDS Dtpsy_1438 NC_011992.1 1508052 1508459 D PFAM: protein of unknown function DUF336; KEGG: ajs:Ajs_2410 hypothetical protein; protein of unknown function DUF336 1508052..1508459 Acidovorax ebreus TPSY 7382691 YP_002552901.1 CDS Dtpsy_1439 NC_011992.1 1508681 1508890 R KEGG: ajs:Ajs_2409 hypothetical protein; hypothetical protein complement(1508681..1508890) Acidovorax ebreus TPSY 7382692 YP_002552902.1 CDS Dtpsy_1440 NC_011992.1 1509087 1509497 R PFAM: Biopolymer transport protein ExbD/TolR; KEGG: ajs:Ajs_2408 biopolymer transport protein ExbD/TolR; Biopolymer transport protein ExbD/TolR complement(1509087..1509497) Acidovorax ebreus TPSY 7383263 YP_002552903.1 CDS Dtpsy_1441 NC_011992.1 1509504 1510220 R PFAM: MotA/TolQ/ExbB proton channel; KEGG: ajs:Ajs_2407 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel complement(1509504..1510220) Acidovorax ebreus TPSY 7385082 YP_002552904.1 CDS Dtpsy_1442 NC_011992.1 1510238 1510939 R TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: ajs:Ajs_2406 TonB family protein; TonB family protein complement(1510238..1510939) Acidovorax ebreus TPSY 7385083 YP_002552905.1 CDS Dtpsy_1443 NC_011992.1 1511047 1511319 R PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: ajs:Ajs_2405 BFD/(2Fe-2S)-binding domain-containing protein; BFD domain protein (2Fe-2S)-binding domain protein complement(1511047..1511319) Acidovorax ebreus TPSY 7385084 YP_002552906.1 CDS Dtpsy_1444 NC_011992.1 1511507 1511797 R PFAM: SWIB/MDM2 domain protein; SMART: SWIB/MDM2 domain protein; KEGG: ajs:Ajs_2404 SWIB/MDM2 domain-containing protein; SWIB/MDM2 domain protein complement(1511507..1511797) Acidovorax ebreus TPSY 7385085 YP_002552907.1 CDS Dtpsy_1445 NC_011992.1 1512022 1512528 D regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity; ribonuclease activity regulator protein RraA 1512022..1512528 Acidovorax ebreus TPSY 7385086 YP_002552908.1 CDS Dtpsy_1446 NC_011992.1 1512538 1513485 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: ajs:Ajs_2402 hypothetical protein; protein of unknown function DUF6 transmembrane complement(1512538..1513485) Acidovorax ebreus TPSY 7385087 YP_002552909.1 CDS Dtpsy_1447 NC_011992.1 1513813 1515144 D TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: ajs:Ajs_2401 isocitrate lyase; isocitrate lyase 1513813..1515144 Acidovorax ebreus TPSY 7385088 YP_002552910.1 CDS thrS NC_011992.1 1515427 1517346 D catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 1515427..1517346 Acidovorax ebreus TPSY 7385089 YP_002552911.1 CDS Dtpsy_1449 NC_011992.1 1517487 1518023 D TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; KEGG: ajs:Ajs_2399 translation initiation factor 3; translation initiation factor IF-3 1517487..1518023 Acidovorax ebreus TPSY 7385090 YP_002552912.1 CDS rpmI NC_011992.1 1518197 1518400 D TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35; KEGG: ajs:Ajs_2398 50S ribosomal protein L35P; 50S ribosomal protein L35 1518197..1518400 Acidovorax ebreus TPSY 7385091 YP_002552913.1 CDS rplT NC_011992.1 1518427 1518786 D binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 1518427..1518786 Acidovorax ebreus TPSY 7385092 YP_002552914.1 CDS pheS NC_011992.1 1518889 1519941 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 1518889..1519941 Acidovorax ebreus TPSY 7385093 YP_002552915.1 CDS pheT NC_011992.1 1520063 1522507 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 1520063..1522507 Acidovorax ebreus TPSY 7385094 YP_002552916.1 CDS ihfA NC_011992.1 1522504 1522854 D This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha 1522504..1522854 Acidovorax ebreus TPSY 7385095 YP_002552917.1 CDS Dtpsy_1455 NC_011992.1 1522955 1523383 D PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: ajs:Ajs_2393 MerR family transcriptional regulator; transcriptional regulator, MerR family 1522955..1523383 Acidovorax ebreus TPSY 7385096 YP_002552918.1 CDS Dtpsy_1456 NC_011992.1 1523726 1524898 D TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl-phosphate synthase small chain; KEGG: ajs:Ajs_2392 carbamoyl-phosphate synthase small subunit; carbamoyl-phosphate synthase, small subunit 1523726..1524898 Acidovorax ebreus TPSY 7385098 YP_002552919.1 CDS Dtpsy_1457 NC_011992.1 1524920 1525321 D KEGG: ajs:Ajs_2391 hypothetical protein; hypothetical protein 1524920..1525321 Acidovorax ebreus TPSY 7385099 YP_002552920.1 CDS Dtpsy_1458 NC_011992.1 1525332 1528583 D TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; KEGG: ajs:Ajs_2390 carbamoyl-phosphate synthase large subunit; carbamoyl-phosphate synthase, large subunit 1525332..1528583 Acidovorax ebreus TPSY 7385100 YP_002552921.1 CDS Dtpsy_1459 NC_011992.1 1528911 1530254 R converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; glutamate dehydrogenase complement(1528911..1530254) Acidovorax ebreus TPSY 7385101 YP_002552922.1 CDS Dtpsy_1460 NC_011992.1 1530643 1531710 D TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: azo:azo0267 putative membrane fusion protein; efflux transporter, RND family, MFP subunit 1530643..1531710 Acidovorax ebreus TPSY 7385102 YP_002552923.1 CDS Dtpsy_1461 NC_011992.1 1531710 1534814 D TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: dar:Daro_2801 heavy metal efflux pump CzcA; heavy metal efflux pump, CzcA family 1531710..1534814 Acidovorax ebreus TPSY 7385103 YP_002552924.1 CDS Dtpsy_1462 NC_011992.1 1534811 1535149 D KEGG: azo:azo0269 hypothetical protein; hypothetical protein 1534811..1535149 Acidovorax ebreus TPSY 7385104 YP_002552925.1 CDS Dtpsy_1463 NC_011992.1 1535146 1536453 D KEGG: dar:Daro_2803 outer membrane efflux protein; outer membrane efflux protein 1535146..1536453 Acidovorax ebreus TPSY 7385105 YP_002552926.1 CDS Dtpsy_1464 NC_011992.1 1536517 1537926 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ajs:Ajs_1952 integral membrane sensor signal transduction histidine kinase; histidine kinase complement(1536517..1537926) Acidovorax ebreus TPSY 7385106 YP_002552927.1 CDS Dtpsy_1465 NC_011992.1 1537923 1538594 R PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: ajs:Ajs_1953 two component transcriptional regulator; two component transcriptional regulator, winged helix family complement(1537923..1538594) Acidovorax ebreus TPSY 7385107 YP_002552928.1 CDS Dtpsy_1466 NC_011992.1 1538604 1540511 R TIGRFAM: DNA mismatch repair protein MutL; PFAM: ATP-binding region ATPase domain protein; DNA mismatch repair protein domain protein; MutL dimerisation; KEGG: ajs:Ajs_0978 DNA mismatch repair protein MutL; DNA mismatch repair protein MutL complement(1538604..1540511) Acidovorax ebreus TPSY 7385108 YP_002552929.1 CDS Dtpsy_1467 NC_011992.1 1540575 1541216 D PFAM: SNARE associated Golgi protein; KEGG: ajs:Ajs_0980 DedA protein (DSG-1 protein); SNARE associated Golgi protein 1540575..1541216 Acidovorax ebreus TPSY 7385109 YP_002552930.1 CDS Dtpsy_1468 NC_011992.1 1541284 1541535 R PFAM: 17 kDa surface antigen; KEGG: pna:Pnap_1169 17 kDa surface antigen; 17 kDa surface antigen complement(1541284..1541535) Acidovorax ebreus TPSY 7385110 YP_002552931.1 CDS Dtpsy_1469 NC_011992.1 1542073 1542549 D TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: ajs:Ajs_2389 transcription elongation factor GreA; transcription elongation factor GreA 1542073..1542549 Acidovorax ebreus TPSY 7385111 YP_002552932.1 CDS Dtpsy_1470 NC_011992.1 1542561 1542974 D KEGG: ajs:Ajs_2388 hypothetical protein; hypothetical protein 1542561..1542974 Acidovorax ebreus TPSY 7385112 YP_002552933.1 CDS Dtpsy_1471 NC_011992.1 1542981 1543862 D KEGG: ajs:Ajs_2387 hypothetical protein; hypothetical protein 1542981..1543862 Acidovorax ebreus TPSY 7385113 YP_002552934.1 CDS Dtpsy_1472 NC_011992.1 1543920 1544681 R KEGG: ajs:Ajs_2386 hypothetical protein; hypothetical protein complement(1543920..1544681) Acidovorax ebreus TPSY 7385114 YP_002552935.1 CDS Dtpsy_1473 NC_011992.1 1544693 1545166 R PFAM: protein of unknown function UPF0044; KEGG: ajs:Ajs_2385 hypothetical protein; protein of unknown function UPF0044 complement(1544693..1545166) Acidovorax ebreus TPSY 7385115 YP_002552936.1 CDS Dtpsy_1474 NC_011992.1 1545244 1545906 D PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: ajs:Ajs_2384 ribosomal RNA methyltransferase RrmJ/FtsJ; ribosomal RNA methyltransferase RrmJ/FtsJ 1545244..1545906 Acidovorax ebreus TPSY 7385116 YP_002552937.1 CDS Dtpsy_1475 NC_011992.1 1546050 1547969 D KEGG: ajs:Ajs_2383 FtsH peptidase; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH 1546050..1547969 Acidovorax ebreus TPSY 7385117 YP_002552938.1 CDS Dtpsy_1476 NC_011992.1 1548041 1548892 D KEGG: ajs:Ajs_2382 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; dihydropteroate synthase 1548041..1548892 Acidovorax ebreus TPSY 7385118 YP_002552939.1 CDS glmM NC_011992.1 1548905 1550239 D catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 1548905..1550239 Acidovorax ebreus TPSY 7385119 YP_002552940.1 CDS Dtpsy_1478 NC_011992.1 1550307 1552529 R KEGG: ajs:Ajs_2380 diguanylate cyclase/phosphodiesterase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; GGDEF domain containing protein; PAC repeat-containing protein; EAL domain protein; diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) complement(1550307..1552529) Acidovorax ebreus TPSY 7385120 YP_002552941.1 CDS Dtpsy_1479 NC_011992.1 1552760 1553596 D KEGG: ajs:Ajs_2379 ornithine-acyl[acyl carrier protein] N-acyltransferase; ornithine-acyl(acyl carrier protein) N-acyltransferase 1552760..1553596 Acidovorax ebreus TPSY 7385121 YP_002552942.1 CDS Dtpsy_1480 NC_011992.1 1553712 1555883 D catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 1553712..1555883 Acidovorax ebreus TPSY 7385122 YP_002552943.1 CDS Dtpsy_1481 NC_011992.1 1555880 1556344 D PFAM: Phosphoglycerate mutase; KEGG: ajs:Ajs_2377 phosphohistidine phosphatase, SixA; putative phosphohistidine phosphatase, SixA 1555880..1556344 Acidovorax ebreus TPSY 7385123 YP_002552944.1 CDS Dtpsy_1483 NC_011992.1 1556896 1558377 R PFAM: Ppx/GppA phosphatase; KEGG: ajs:Ajs_2375 Ppx/GppA phosphatase; Ppx/GppA phosphatase complement(1556896..1558377) Acidovorax ebreus TPSY 7385125 YP_002552945.1 CDS Dtpsy_1484 NC_011992.1 1558462 1559520 R KEGG: ajs:Ajs_2374 twin-arginine translocation pathway signal; twin-arginine translocation pathway signal complement(1558462..1559520) Acidovorax ebreus TPSY 7385126 YP_002552946.1 CDS Dtpsy_1485 NC_011992.1 1559627 1560118 R PFAM: beta-Ig-H3/fasciclin; SMART: beta-Ig-H3/fasciclin; KEGG: ajs:Ajs_2373 beta-Ig-H3/fasciclin; beta-Ig-H3/fasciclin complement(1559627..1560118) Acidovorax ebreus TPSY 7385127 YP_002552947.1 CDS Dtpsy_1486 NC_011992.1 1560319 1561359 D TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: ajs:Ajs_2372 phosphate ABC transporter, periplasmic phosphate-binding protein; phosphate ABC transporter, periplasmic phosphate-binding protein 1560319..1561359 Acidovorax ebreus TPSY 7385128 YP_002552948.1 CDS Dtpsy_1487 NC_011992.1 1561437 1562450 D TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_2371 phosphate ABC transporter, inner membrane subunit PstC; phosphate ABC transporter, inner membrane subunit PstC 1561437..1562450 Acidovorax ebreus TPSY 7385129 YP_002552949.1 CDS pstA NC_011992.1 1562447 1563328 D Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; phosphate transporter permease subunit PtsA 1562447..1563328 Acidovorax ebreus TPSY 7385130 YP_002552950.1 CDS Dtpsy_1489 NC_011992.1 1563351 1564133 D KEGG: ajs:Ajs_2369 phosphate ABC transporter, ATPase subunit; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; phosphate ABC transporter, ATPase subunit 1563351..1564133 Acidovorax ebreus TPSY 7385131 YP_002552951.1 CDS Dtpsy_1490 NC_011992.1 1564148 1564849 D TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: ajs:Ajs_2368 phosphate uptake regulator, PhoU; phosphate uptake regulator, PhoU 1564148..1564849 Acidovorax ebreus TPSY 7385132 YP_002552952.1 CDS Dtpsy_1491 NC_011992.1 1564866 1565573 D KEGG: ajs:Ajs_2367 two component transcriptional regulator; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; two component transcriptional regulator PhoB, winged helix family 1564866..1565573 Acidovorax ebreus TPSY 7385133 YP_002552953.1 CDS Dtpsy_1492 NC_011992.1 1565660 1567057 D KEGG: ajs:Ajs_2366 multi-sensor signal transduction histidine kinase; TIGRFAM: phosphate regulon sensor kinase PhoR; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS/PAC sensor signal transduction histidine kinase 1565660..1567057 Acidovorax ebreus TPSY 7385134 YP_002552954.1 CDS Dtpsy_1493 NC_011992.1 1567002 1568378 R TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: ajs:Ajs_2365 MATE efflux family protein; MATE efflux family protein complement(1567002..1568378) Acidovorax ebreus TPSY 7385135 YP_002552955.1 CDS Dtpsy_1494 NC_011992.1 1568378 1570075 R KEGG: ajs:Ajs_2364 putative inner membrane transmembrane protein; putative inner membrane transmembrane protein complement(1568378..1570075) Acidovorax ebreus TPSY 7385136 YP_002552956.1 CDS Dtpsy_1495 NC_011992.1 1570226 1570480 R TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31; KEGG: ajs:Ajs_2363 50S ribosomal protein L31P; ribosomal protein L31 complement(1570226..1570480) Acidovorax ebreus TPSY 7385137 YP_002552957.1 CDS Dtpsy_1496 NC_011992.1 1570578 1571726 R PFAM: ABC-2 type transporter; KEGG: ajs:Ajs_2362 ABC-2 type transporter; ABC-2 type transporter complement(1570578..1571726) Acidovorax ebreus TPSY 7385138 YP_002552958.1 CDS Dtpsy_1497 NC_011992.1 1571730 1574540 R PFAM: ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase; KEGG: ajs:Ajs_2361 ABC transporter related; ABC transporter related complement(1571730..1574540) Acidovorax ebreus TPSY 7385139 YP_002552959.1 CDS Dtpsy_1498 NC_011992.1 1574565 1575635 R PFAM: secretion protein HlyD family protein; KEGG: ajs:Ajs_2360 secretion protein HlyD family protein; secretion protein HlyD family protein complement(1574565..1575635) Acidovorax ebreus TPSY 7385140 YP_002552960.1 CDS Dtpsy_1499 NC_011992.1 1575656 1577164 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: ajs:Ajs_2359 RND efflux system outer membrane lipoprotein; RND efflux system, outer membrane lipoprotein, NodT family complement(1575656..1577164) Acidovorax ebreus TPSY 7385141 YP_002552961.1 CDS rho NC_011992.1 1577347 1578609 R An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho complement(1577347..1578609) Acidovorax ebreus TPSY 7385142 YP_002552962.1 CDS Dtpsy_1501 NC_011992.1 1578849 1579181 R TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: ajs:Ajs_2357 thioredoxin; thioredoxin complement(1578849..1579181) Acidovorax ebreus TPSY 7385143 YP_002552963.1 CDS Dtpsy_1502 NC_011992.1 1579297 1581867 D KEGG: ajs:Ajs_2356 exonuclease-like protein; exonuclease-like protein 1579297..1581867 Acidovorax ebreus TPSY 7385144 YP_002552964.1 CDS Dtpsy_1503 NC_011992.1 1581860 1585165 D PFAM: UvrD/REP helicase; KEGG: ajs:Ajs_2355 UvrD/REP helicase; UvrD/REP helicase 1581860..1585165 Acidovorax ebreus TPSY 7385145 YP_002552965.1 CDS Dtpsy_1504 NC_011992.1 1585368 1585964 D PFAM: Methyltransferase type 11; KEGG: ajs:Ajs_2354 methyltransferase type 11; Methyltransferase type 11 1585368..1585964 Acidovorax ebreus TPSY 7385146 YP_002552966.1 CDS Dtpsy_1505 NC_011992.1 1585978 1587321 D PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; KEGG: ajs:Ajs_2353 hypothetical protein; HI0933 family protein 1585978..1587321 Acidovorax ebreus TPSY 7385147 YP_002552967.1 CDS Dtpsy_1506 NC_011992.1 1587406 1588041 R KEGG: ajs:Ajs_2352 hypothetical protein; hypothetical protein complement(1587406..1588041) Acidovorax ebreus TPSY 7385148 YP_002552968.1 CDS Dtpsy_1507 NC_011992.1 1588968 1591004 D KEGG: ajs:Ajs_2350 DNA polymerase III, subunits gamma and tau; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; DNA polymerase III, subunits gamma and tau 1588968..1591004 Acidovorax ebreus TPSY 7385150 YP_002552969.1 CDS Dtpsy_1508 NC_011992.1 1591034 1591366 D PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_2349 hypothetical protein; hypothetical protein 1591034..1591366 Acidovorax ebreus TPSY 7385151 YP_002552970.1 CDS recR NC_011992.1 1591525 1592115 D involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 1591525..1592115 Acidovorax ebreus TPSY 7385152 YP_002552971.1 CDS Dtpsy_1510 NC_011992.1 1592192 1592587 D KEGG: ajs:Ajs_2347 membrane protein-like protein; membrane protein-like protein 1592192..1592587 Acidovorax ebreus TPSY 7385153 YP_002552972.1 CDS Dtpsy_1511 NC_011992.1 1592597 1593784 R PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_2346 major facilitator superfamily transporter; major facilitator superfamily MFS_1 complement(1592597..1593784) Acidovorax ebreus TPSY 7385154 YP_002552973.1 CDS metN NC_011992.1 1594370 1595416 D part of the metNIQ transport system for methionine; DL-methionine transporter ATP-binding subunit 1594370..1595416 Acidovorax ebreus TPSY 7385155 YP_002552974.1 CDS Dtpsy_1513 NC_011992.1 1595427 1596092 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_2344 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 1595427..1596092 Acidovorax ebreus TPSY 7385156 YP_002552975.1 CDS Dtpsy_1514 NC_011992.1 1596255 1597361 D KEGG: ajs:Ajs_2343 hypothetical protein; hypothetical protein 1596255..1597361 Acidovorax ebreus TPSY 7385157 YP_002552976.1 CDS Dtpsy_1515 NC_011992.1 1597547 1598347 D TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: ajs:Ajs_2342 YaeC family lipoprotein; lipoprotein, YaeC family 1597547..1598347 Acidovorax ebreus TPSY 7385158 YP_002552977.1 CDS Dtpsy_1516 NC_011992.1 1598502 1599053 D PFAM: NADPH-dependent FMN reductase; KEGG: ajs:Ajs_2341 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 1598502..1599053 Acidovorax ebreus TPSY 7385159 YP_002552978.1 CDS Dtpsy_1517 NC_011992.1 1599178 1599828 R PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: ajs:Ajs_2340 (acyl-carrier-protein) phosphodiesterase; NAD(P)H dehydrogenase (quinone) complement(1599178..1599828) Acidovorax ebreus TPSY 7385160 YP_002552979.1 CDS Dtpsy_1518 NC_011992.1 1599956 1600909 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_2339 LysR family transcriptional regulator; transcriptional regulator, LysR family 1599956..1600909 Acidovorax ebreus TPSY 7385161 YP_002552980.1 CDS Dtpsy_1519 NC_011992.1 1601191 1602198 D TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: ajs:Ajs_2338 sulfate ABC transporter, periplasmic sulfate-binding protein; sulfate ABC transporter, periplasmic sulfate-binding protein 1601191..1602198 Acidovorax ebreus TPSY 7385162 YP_002552981.1 CDS Dtpsy_1520 NC_011992.1 1602346 1603197 D TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_2337 sulfate ABC transporter, inner membrane subunit CysT; sulfate ABC transporter, inner membrane subunit CysT 1602346..1603197 Acidovorax ebreus TPSY 7383987 YP_002552982.1 CDS Dtpsy_1521 NC_011992.1 1603194 1604105 D TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_2336 sulfate ABC transporter, inner membrane subunit CysW; sulfate ABC transporter, inner membrane subunit CysW 1603194..1604105 Acidovorax ebreus TPSY 7382448 YP_002552983.1 CDS Dtpsy_1522 NC_011992.1 1604117 1605244 D KEGG: ajs:Ajs_2335 sulfate ABC transporter, ATPase subunit; TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; sulfate ABC transporter, ATPase subunit 1604117..1605244 Acidovorax ebreus TPSY 7382449 YP_002552984.1 CDS Dtpsy_1523 NC_011992.1 1605304 1605831 D PFAM: Disulphide bond formation protein DsbB; KEGG: ajs:Ajs_2334 disulphide bond formation protein DsbB; Disulphide bond formation protein DsbB 1605304..1605831 Acidovorax ebreus TPSY 7382450 YP_002552985.1 CDS Dtpsy_1524 NC_011992.1 1605917 1606588 R PFAM: glutaredoxin; Glutathione S-transferase domain; KEGG: ajs:Ajs_2333 glutaredoxin; Glutathione S-transferase domain protein complement(1605917..1606588) Acidovorax ebreus TPSY 7382451 YP_002552986.1 CDS Dtpsy_1525 NC_011992.1 1606614 1608167 R PFAM: PepSY-associated TM helix domain protein; KEGG: ajs:Ajs_2332 PepSY-associated TM helix domain-containing protein; PepSY-associated TM helix domain protein complement(1606614..1608167) Acidovorax ebreus TPSY 7382452 YP_002552987.1 CDS Dtpsy_1526 NC_011992.1 1608184 1610358 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: vei:Veis_4740 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor complement(1608184..1610358) Acidovorax ebreus TPSY 7382453 YP_002552988.1 CDS Dtpsy_1527 NC_011992.1 1610525 1610902 R KEGG: ajs:Ajs_2330 hypothetical protein; hypothetical protein complement(1610525..1610902) Acidovorax ebreus TPSY 7382454 YP_002552989.1 CDS Dtpsy_1528 NC_011992.1 1611022 1611888 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_2329 LysR family transcriptional regulator; transcriptional regulator, LysR family complement(1611022..1611888) Acidovorax ebreus TPSY 7382455 YP_002552990.1 CDS Dtpsy_1529 NC_011992.1 1611992 1612882 D PFAM: beta-lactamase; KEGG: ajs:Ajs_2328 beta-lactamase; Beta-lactamase 1611992..1612882 Acidovorax ebreus TPSY 7382456 YP_002552991.1 CDS Dtpsy_1530 NC_011992.1 1612886 1614232 R catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis; N-acetylglutamate synthase complement(1612886..1614232) Acidovorax ebreus TPSY 7382457 YP_002552992.1 CDS Dtpsy_1531 NC_011992.1 1614520 1615668 R PFAM: acyltransferase 3; KEGG: ajs:Ajs_2326 acyltransferase 3; acyltransferase 3 complement(1614520..1615668) Acidovorax ebreus TPSY 7382458 YP_002552993.1 CDS Dtpsy_1532 NC_011992.1 1615804 1616082 D PFAM: transposase IS3/IS911 family protein; KEGG: ajs:Ajs_1845 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 1615804..1616082 Acidovorax ebreus TPSY 7382459 YP_002552994.1 CDS Dtpsy_1533 NC_011992.1 1616079 1616954 D PFAM: Integrase catalytic region; KEGG: ajs:Ajs_1844 integrase catalytic subunit; Integrase catalytic region 1616079..1616954 Acidovorax ebreus TPSY 7382460 YP_002552995.1 CDS Dtpsy_1534 NC_011992.1 1617465 1618439 D PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_2325 hypothetical protein; hypothetical protein 1617465..1618439 Acidovorax ebreus TPSY 7382461 YP_002552996.1 CDS Dtpsy_1535 NC_011992.1 1618542 1619147 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: ajs:Ajs_2324 methyltransferase type 11; Methyltransferase type 11 complement(1618542..1619147) Acidovorax ebreus TPSY 7382462 YP_002552997.1 CDS Dtpsy_1536 NC_011992.1 1619316 1619663 D SMART: Ankyrin; KEGG: ajs:Ajs_2323 hypothetical protein; Ankyrin 1619316..1619663 Acidovorax ebreus TPSY 7382463 YP_002552998.1 CDS Dtpsy_1537 NC_011992.1 1619745 1620950 R PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_2322 major facilitator superfamily transporter; major facilitator superfamily MFS_1 complement(1619745..1620950) Acidovorax ebreus TPSY 7382464 YP_002552999.1 CDS Dtpsy_1538 NC_011992.1 1621268 1622050 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_2321 ABC transporter related; ABC transporter related 1621268..1622050 Acidovorax ebreus TPSY 7382465 YP_002553000.1 CDS Dtpsy_1539 NC_011992.1 1622068 1622661 D PFAM: cobalt transport protein; KEGG: ajs:Ajs_2320 cobalt transport protein; cobalt transport protein 1622068..1622661 Acidovorax ebreus TPSY 7382466 YP_002553001.1 CDS Dtpsy_1540 NC_011992.1 1622698 1623282 D PFAM: BioY protein; KEGG: ajs:Ajs_2319 BioY protein; BioY protein 1622698..1623282 Acidovorax ebreus TPSY 7382467 YP_002553002.1 CDS Dtpsy_1541 NC_011992.1 1623279 1624763 D PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_2318 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 1623279..1624763 Acidovorax ebreus TPSY 7382468 YP_002553003.1 CDS Dtpsy_1542 NC_011992.1 1624760 1625929 D TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: ajs:Ajs_2317 acetyl-CoA acetyltransferases; acetyl-CoA acetyltransferase 1624760..1625929 Acidovorax ebreus TPSY 7382469 YP_002553004.1 CDS Dtpsy_1543 NC_011992.1 1625932 1626630 D PFAM: nitroreductase; KEGG: ajs:Ajs_2316 nitroreductase; nitroreductase 1625932..1626630 Acidovorax ebreus TPSY 7382470 YP_002553005.1 CDS Dtpsy_1544 NC_011992.1 1626814 1628001 R PFAM: metallophosphoesterase; KEGG: ajs:Ajs_2315 metallophosphoesterase; metallophosphoesterase complement(1626814..1628001) Acidovorax ebreus TPSY 7382471 YP_002553006.1 CDS Dtpsy_1545 NC_011992.1 1628294 1629634 D PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; SAF domain protein; KEGG: ajs:Ajs_2314 SAF domain-containing protein; SAF domain protein 1628294..1629634 Acidovorax ebreus TPSY 7382472 YP_002553007.1 CDS Dtpsy_1546 NC_011992.1 1629682 1633707 D KEGG: ajs:Ajs_2313 ATP-dependent helicase HrpA; TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase domain protein; helicase-associated domain protein; protein of unknown function DUF1605; SMART: helicase domain protein; AAA ATPase; DEAD-like helicases; ATP-dependent helicase HrpA 1629682..1633707 Acidovorax ebreus TPSY 7382473 YP_002553008.1 CDS Dtpsy_1547 NC_011992.1 1633939 1634439 R PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: ajs:Ajs_2312 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-related FMN-binding complement(1633939..1634439) Acidovorax ebreus TPSY 7382474 YP_002553009.1 CDS Dtpsy_1548 NC_011992.1 1634561 1634962 R KEGG: ajs:Ajs_2311 hypothetical protein; hypothetical protein complement(1634561..1634962) Acidovorax ebreus TPSY 7382475 YP_002553010.1 CDS Dtpsy_1549 NC_011992.1 1635124 1635798 R Represses a number of genes involved in the response to DNA damage; LexA repressor complement(1635124..1635798) Acidovorax ebreus TPSY 7382476 YP_002553011.1 CDS Dtpsy_1550 NC_011992.1 1635881 1636852 D PFAM: Asparaginase/glutaminase; KEGG: ajs:Ajs_2309 asparaginase; Asparaginase 1635881..1636852 Acidovorax ebreus TPSY 7382477 YP_002553012.1 CDS adk NC_011992.1 1636940 1637596 R essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase complement(1636940..1637596) Acidovorax ebreus TPSY 7382478 YP_002553013.1 CDS Dtpsy_1552 NC_011992.1 1637718 1638506 R KEGG: ajs:Ajs_2307 3-deoxy-D-manno-octulosonate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; 3-deoxy-D-manno-octulosonate cytidylyltransferase complement(1637718..1638506) Acidovorax ebreus TPSY 7382479 YP_002553014.1 CDS Dtpsy_1553 NC_011992.1 1638503 1638685 R PFAM: protein of unknown function DUF343; KEGG: ajs:Ajs_2306 hypothetical protein; protein of unknown function DUF343 complement(1638503..1638685) Acidovorax ebreus TPSY 7382480 YP_002553015.1 CDS lpxK NC_011992.1 1638694 1639710 R transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase complement(1638694..1639710) Acidovorax ebreus TPSY 7382481 YP_002553016.1 CDS Dtpsy_1555 NC_011992.1 1639721 1640146 R PFAM: Biopolymer transport protein ExbD/TolR; KEGG: ajs:Ajs_2304 biopolymer transport protein ExbD/TolR; Biopolymer transport protein ExbD/TolR complement(1639721..1640146) Acidovorax ebreus TPSY 7382482 YP_002553017.1 CDS Dtpsy_1556 NC_011992.1 1640178 1640816 R PFAM: MotA/TolQ/ExbB proton channel; KEGG: ajs:Ajs_2303 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel complement(1640178..1640816) Acidovorax ebreus TPSY 7382483 YP_002553018.1 CDS Dtpsy_1557 NC_011992.1 1641193 1642530 D KEGG: ajs:Ajs_2302 exodeoxyribonuclease VII large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII large subunit; nucleic acid binding OB-fold tRNA/helicase-type; exodeoxyribonuclease VII, large subunit 1641193..1642530 Acidovorax ebreus TPSY 7382484 YP_002553019.1 CDS Dtpsy_1558 NC_011992.1 1642678 1643259 D PFAM: manganese and iron superoxide dismutase; KEGG: ajs:Ajs_2301 superoxide dismutase; Superoxide dismutase 1642678..1643259 Acidovorax ebreus TPSY 7382485 YP_002553020.1 CDS Dtpsy_1559 NC_011992.1 1643603 1645837 D KEGG: ajs:Ajs_2300 isocitrate dehydrogenase, NADP-dependent; TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate dehydrogenase NADP-dependent monomeric type; isocitrate dehydrogenase, NADP-dependent 1643603..1645837 Acidovorax ebreus TPSY 7382486 YP_002553021.1 CDS Dtpsy_1560 NC_011992.1 1646066 1646572 R PFAM: protein of unknown function DUF192; KEGG: ajs:Ajs_2299 hypothetical protein; protein of unknown function DUF192 complement(1646066..1646572) Acidovorax ebreus TPSY 7382487 YP_002553022.1 CDS Dtpsy_1561 NC_011992.1 1646668 1646931 R KEGG: ajs:Ajs_2298 hypothetical protein; hypothetical protein complement(1646668..1646931) Acidovorax ebreus TPSY 7382488 YP_002553023.1 CDS Dtpsy_1562 NC_011992.1 1647205 1648464 D Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase 1647205..1648464 Acidovorax ebreus TPSY 7382489 YP_002553024.1 CDS Dtpsy_1563 NC_011992.1 1648813 1649196 D hypothetical protein 1648813..1649196 Acidovorax ebreus TPSY 7382490 YP_002553025.1 CDS Dtpsy_1564 NC_011992.1 1649277 1649597 D PFAM: Prophage CP4-57 regulatory; KEGG: vvy:VV2250 transcriptional regulator; phage transcriptional regulator, AlpA 1649277..1649597 Acidovorax ebreus TPSY 7382491 YP_002553026.1 CDS Dtpsy_1566 NC_011992.1 1651571 1651837 D hypothetical protein 1651571..1651837 Acidovorax ebreus TPSY 7382493 YP_002553027.1 CDS Dtpsy_1567 NC_011992.1 1651847 1653562 D KEGG: tbd:Tbd_1821 putative type IV secretory pathway VirD4 component; putative type IV secretory pathway VirD4 component 1651847..1653562 Acidovorax ebreus TPSY 7382494 YP_002553028.1 CDS Dtpsy_1568 NC_011992.1 1653827 1654318 D hypothetical protein 1653827..1654318 Acidovorax ebreus TPSY 7382495 YP_002553029.1 CDS Dtpsy_1569 NC_011992.1 1654345 1654599 D hypothetical protein 1654345..1654599 Acidovorax ebreus TPSY 7382496 YP_002553030.1 CDS Dtpsy_1570 NC_011992.1 1654602 1657883 D TIGRFAM: conjugative relaxase domain protein; PFAM: TrwC relaxase; KEGG: tbd:Tbd_1686 putative ATP-dependent exoDNAse (exonuclease V) alpha subunit; conjugative relaxase domain protein 1654602..1657883 Acidovorax ebreus TPSY 7382497 YP_002553031.1 CDS Dtpsy_1571 NC_011992.1 1658028 1658771 D KEGG: tbd:Tbd_1817 hypothetical protein; hypothetical protein 1658028..1658771 Acidovorax ebreus TPSY 7382498 YP_002553032.1 CDS Dtpsy_1572 NC_011992.1 1659347 1659574 D hypothetical protein 1659347..1659574 Acidovorax ebreus TPSY 7382499 YP_002553033.1 CDS Dtpsy_1573 NC_011992.1 1659614 1659949 R KEGG: rme:Rmet_4602 transcriptional regulators, TraR/DksA family; transcriptional regulator, TraR/DksA family complement(1659614..1659949) Acidovorax ebreus TPSY 7382500 YP_002553034.1 CDS Dtpsy_1574 NC_011992.1 1659966 1660829 R PFAM: UspA domain protein; KEGG: rme:Rmet_4601 UspA; UspA domain protein complement(1659966..1660829) Acidovorax ebreus TPSY 7382501 YP_002553035.1 CDS Dtpsy_1576 NC_011992.1 1662863 1663249 D hypothetical protein 1662863..1663249 Acidovorax ebreus TPSY 7382503 YP_002553036.1 CDS Dtpsy_1577 NC_011992.1 1663307 1664530 R PFAM: integrase family protein; KEGG: nmu:Nmul_A2184 phage integrase; integrase family protein complement(1663307..1664530) Acidovorax ebreus TPSY 7382504 YP_002553037.1 CDS Dtpsy_1578 NC_011992.1 1664981 1665400 R PFAM: protein of unknown function DUF454; KEGG: ajs:Ajs_2296 hypothetical protein; protein of unknown function DUF454 complement(1664981..1665400) Acidovorax ebreus TPSY 7382507 YP_002553038.1 CDS Dtpsy_1579 NC_011992.1 1665506 1666045 D KEGG: ajs:Ajs_2295 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; peptide deformylase 1665506..1666045 Acidovorax ebreus TPSY 7382508 YP_002553039.1 CDS Dtpsy_1580 NC_011992.1 1666104 1668758 R catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase complement(1666104..1668758) Acidovorax ebreus TPSY 7382509 YP_002553040.1 CDS Dtpsy_1581 NC_011992.1 1668818 1669633 R KEGG: ajs:Ajs_2293 methionine aminopeptidase, type I; TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; methionine aminopeptidase, type I complement(1668818..1669633) Acidovorax ebreus TPSY 7382510 YP_002553041.1 CDS Dtpsy_1582 NC_011992.1 1669812 1673846 D catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase 1669812..1673846 Acidovorax ebreus TPSY 7382511 YP_002553042.1 CDS Dtpsy_1583 NC_011992.1 1673866 1674297 R KEGG: ajs:Ajs_2291 hypothetical protein; hypothetical protein complement(1673866..1674297) Acidovorax ebreus TPSY 7382512 YP_002553043.1 CDS Dtpsy_1584 NC_011992.1 1674412 1675410 D PFAM: protein of unknown function DUF808; KEGG: ajs:Ajs_2290 hypothetical protein; protein of unknown function DUF808 1674412..1675410 Acidovorax ebreus TPSY 7382513 YP_002553044.1 CDS Dtpsy_1585 NC_011992.1 1675564 1676151 D PFAM: OmpW family protein; OmpF family protein; KEGG: ajs:Ajs_2289 OmpW family protein; OmpW family protein 1675564..1676151 Acidovorax ebreus TPSY 7382514 YP_002553045.1 CDS Dtpsy_1586 NC_011992.1 1676449 1677450 D TIGRFAM: methyltransferase; PFAM: methyltransferase; KEGG: ajs:Ajs_2288 hypothetical protein; methyltransferase 1676449..1677450 Acidovorax ebreus TPSY 7382515 YP_002553046.1 CDS Dtpsy_1587 NC_011992.1 1677470 1678831 D PFAM: protein of unknown function DUF323; KEGG: ajs:Ajs_2287 hypothetical protein; protein of unknown function DUF323 1677470..1678831 Acidovorax ebreus TPSY 7382516 YP_002553047.1 CDS Dtpsy_1588 NC_011992.1 1678900 1680180 R KEGG: ajs:Ajs_2286 O-acetylhomoserine/O-acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; O-acetylhomoserine/O-acetylserine sulfhydrylase complement(1678900..1680180) Acidovorax ebreus TPSY 7382517 YP_002553048.1 CDS Dtpsy_1589 NC_011992.1 1680473 1682476 R PFAM: peptidase U32; KEGG: ajs:Ajs_2285 peptidase U32; peptidase U32 complement(1680473..1682476) Acidovorax ebreus TPSY 7382518 YP_002553049.1 CDS Dtpsy_1590 NC_011992.1 1682682 1683896 D TIGRFAM: sodium/glutamate symporter; PFAM: sodium/glutamate symporter; KEGG: ajs:Ajs_2284 sodium/glutamate symporter; sodium/glutamate symporter 1682682..1683896 Acidovorax ebreus TPSY 7382519 YP_002553050.1 CDS Dtpsy_1591 NC_011992.1 1683925 1684161 D KEGG: ajs:Ajs_2283 hypothetical protein; hypothetical protein 1683925..1684161 Acidovorax ebreus TPSY 7382520 YP_002553051.1 CDS Dtpsy_1592 NC_011992.1 1684215 1685300 D PFAM: CMP/dCMP deaminase zinc-binding; KEGG: ajs:Ajs_2282 CMP/dCMP deaminase, zinc-binding; CMP/dCMP deaminase zinc-binding 1684215..1685300 Acidovorax ebreus TPSY 7382521 YP_002553052.1 CDS Dtpsy_1593 NC_011992.1 1685293 1686279 D PFAM: peptidase U61 LD-carboxypeptidase A; KEGG: ajs:Ajs_2281 muramoyltetrapeptide carboxypeptidase; Muramoyltetrapeptide carboxypeptidase 1685293..1686279 Acidovorax ebreus TPSY 7382522 YP_002553053.1 CDS Dtpsy_1594 NC_011992.1 1686370 1688880 D PFAM: peptidase S45 penicillin amidase; KEGG: dac:Daci_4805 peptidase S45 penicillin amidase; peptidase S45 penicillin amidase 1686370..1688880 Acidovorax ebreus TPSY 7382523 YP_002553054.1 CDS Dtpsy_1595 NC_011992.1 1688974 1689378 D PFAM: OsmC family protein; KEGG: ajs:Ajs_2279 OsmC family protein; OsmC family protein 1688974..1689378 Acidovorax ebreus TPSY 7382524 YP_002553055.1 CDS Dtpsy_1596 NC_011992.1 1689375 1690280 D PFAM: Pirin domain protein; KEGG: ajs:Ajs_2278 pirin domain-containing protein; Pirin domain protein 1689375..1690280 Acidovorax ebreus TPSY 7382525 YP_002553056.1 CDS Dtpsy_1597 NC_011992.1 1690338 1691225 R PFAM: Cobyrinic acid ac-diamide synthase; KEGG: ajs:Ajs_2277 cobyrinic acid a,c-diamide synthase; Cobyrinic acid ac-diamide synthase complement(1690338..1691225) Acidovorax ebreus TPSY 7382526 YP_002553057.1 CDS Dtpsy_1598 NC_011992.1 1691239 1692012 R KEGG: ajs:Ajs_2276 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(1691239..1692012) Acidovorax ebreus TPSY 7382527 YP_002553058.1 CDS Dtpsy_1599 NC_011992.1 1692047 1693789 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: ajs:Ajs_2275 sulphate transporter; sulphate transporter complement(1692047..1693789) Acidovorax ebreus TPSY 7382528 YP_002553059.1 CDS Dtpsy_1600 NC_011992.1 1693927 1694379 D PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: ajs:Ajs_2274 transport-associated; transport-associated 1693927..1694379 Acidovorax ebreus TPSY 7381960 YP_002553060.1 CDS Dtpsy_1601 NC_011992.1 1694413 1695660 D PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: ajs:Ajs_2273 cystathionine beta-lyase; Cys/Met metabolism pyridoxal-phosphate-dependent protein 1694413..1695660 Acidovorax ebreus TPSY 7384673 YP_002553061.1 CDS Dtpsy_1602 NC_011992.1 1695755 1696591 D KEGG: ajs:Ajs_2272 integral membrane protein; integral membrane protein 1695755..1696591 Acidovorax ebreus TPSY 7384674 YP_002553062.1 CDS Dtpsy_1603 NC_011992.1 1696607 1697254 R PFAM: lipolytic protein G-D-S-L family; KEGG: ajs:Ajs_2271 GDSL family lipase; lipolytic protein G-D-S-L family complement(1696607..1697254) Acidovorax ebreus TPSY 7384675 YP_002553063.1 CDS Dtpsy_1604 NC_011992.1 1697279 1698007 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_2270 ABC transporter related; ABC transporter related 1697279..1698007 Acidovorax ebreus TPSY 7384676 YP_002553064.1 CDS Dtpsy_1605 NC_011992.1 1698118 1699338 R involved in the import of serine and threonine coupled with the import of sodium; serine/threonine transporter SstT complement(1698118..1699338) Acidovorax ebreus TPSY 7384677 YP_002553065.1 CDS Dtpsy_1606 NC_011992.1 1699567 1700313 D TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: ajs:Ajs_2268 RNA methyltransferase; RNA methyltransferase, TrmH family, group 3 1699567..1700313 Acidovorax ebreus TPSY 7384678 YP_002553066.1 CDS Dtpsy_1607 NC_011992.1 1700334 1700819 R PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: gur:Gura_0848 3-demethylubiquinone-9 3-methyltransferase; 3-demethylubiquinone-9 3-methyltransferase complement(1700334..1700819) Acidovorax ebreus TPSY 7384679 YP_002553067.1 CDS Dtpsy_1608 NC_011992.1 1700854 1701300 R PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: ajs:Ajs_2266 activator of HSP90 ATPase 1 family protein; Activator of Hsp90 ATPase 1 family protein complement(1700854..1701300) Acidovorax ebreus TPSY 7384680 YP_002553068.1 CDS Dtpsy_1609 NC_011992.1 1701324 1701776 R PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: ajs:Ajs_2265 3-demethylubiquinone-9 3-methyltransferase; 3-demethylubiquinone-9 3-methyltransferase complement(1701324..1701776) Acidovorax ebreus TPSY 7384681 YP_002553069.1 CDS Dtpsy_1610 NC_011992.1 1701831 1702184 R PFAM: protein of unknown function DUF1428; KEGG: ajs:Ajs_2264 hypothetical protein; protein of unknown function DUF1428 complement(1701831..1702184) Acidovorax ebreus TPSY 7384682 YP_002553070.1 CDS Dtpsy_1611 NC_011992.1 1702273 1702941 D PFAM: regulatory protein TetR; KEGG: ajs:Ajs_2263 TetR family transcriptional regulator; regulatory protein TetR 1702273..1702941 Acidovorax ebreus TPSY 7384683 YP_002553071.1 CDS Dtpsy_1612 NC_011992.1 1702938 1703720 D PFAM: Silent information regulator protein Sir2; KEGG: ajs:Ajs_2262 silent information regulator protein Sir2; Silent information regulator protein Sir2 1702938..1703720 Acidovorax ebreus TPSY 7384684 YP_002553072.1 CDS Dtpsy_1613 NC_011992.1 1704042 1704713 D TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; KEGG: ajs:Ajs_2261 3,4-dihydroxy-2-butanone 4-phosphate synthase; 3,4-dihydroxy-2-butanone 4-phosphate synthase 1704042..1704713 Acidovorax ebreus TPSY 7384685 YP_002553073.1 CDS Dtpsy_1614 NC_011992.1 1704721 1705323 R PFAM: Chromate transporter; KEGG: ajs:Ajs_2260 chromate transporter; Chromate transporter complement(1704721..1705323) Acidovorax ebreus TPSY 7384686 YP_002553074.1 CDS Dtpsy_1615 NC_011992.1 1705331 1705939 R PFAM: Chromate transporter; KEGG: ajs:Ajs_2259 chromate transporter; Chromate transporter complement(1705331..1705939) Acidovorax ebreus TPSY 7384687 YP_002553075.1 CDS Dtpsy_1616 NC_011992.1 1706091 1706936 D PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: ajs:Ajs_2258 5-carboxymethyl-2-hydroxymuconate delta-isomerase; 5-carboxymethyl-2-hydroxymuconate Delta-isomerase 1706091..1706936 Acidovorax ebreus TPSY 7384688 YP_002553076.1 CDS Dtpsy_1617 NC_011992.1 1707042 1707374 D PFAM: small multidrug resistance protein; KEGG: ajs:Ajs_2257 small multidrug resistance protein; small multidrug resistance protein 1707042..1707374 Acidovorax ebreus TPSY 7384689 YP_002553077.1 CDS Dtpsy_1618 NC_011992.1 1707445 1708008 D PFAM: Ankyrin; KEGG: ajs:Ajs_2256 ankyrin; Ankyrin 1707445..1708008 Acidovorax ebreus TPSY 7384690 YP_002553078.1 CDS Dtpsy_1619 NC_011992.1 1708128 1709195 R PFAM: protein of unknown function DUF897; KEGG: ajs:Ajs_2255 hypothetical protein; protein of unknown function DUF897 complement(1708128..1709195) Acidovorax ebreus TPSY 7384691 YP_002553079.1 CDS Dtpsy_1620 NC_011992.1 1709291 1710190 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_2254 LysR family transcriptional regulator; transcriptional regulator, LysR family 1709291..1710190 Acidovorax ebreus TPSY 7384692 YP_002553080.1 CDS Dtpsy_1621 NC_011992.1 1710442 1711755 R TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein; KEGG: ajs:Ajs_2253 HipA domain-containing protein; HipA N-terminal domain protein complement(1710442..1711755) Acidovorax ebreus TPSY 7384693 YP_002553081.1 CDS Dtpsy_1622 NC_011992.1 1711768 1712070 R PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: ajs:Ajs_2252 XRE family transcriptional regulator; transcriptional regulator, XRE family complement(1711768..1712070) Acidovorax ebreus TPSY 7384694 YP_002553082.1 CDS Dtpsy_1623 NC_011992.1 1712122 1713075 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_2251 LysR family transcriptional regulator; transcriptional regulator, LysR family complement(1712122..1713075) Acidovorax ebreus TPSY 7384695 YP_002553083.1 CDS Dtpsy_1624 NC_011992.1 1713173 1714528 D catalyzes the formation of pyruvate from serine; D-serine dehydratase 1713173..1714528 Acidovorax ebreus TPSY 7384696 YP_002553084.1 CDS Dtpsy_1625 NC_011992.1 1714599 1715576 D PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_2249 hypothetical protein; hypothetical protein 1714599..1715576 Acidovorax ebreus TPSY 7384697 YP_002553085.1 CDS Dtpsy_1626 NC_011992.1 1715620 1717170 D PFAM: Amidase; KEGG: ajs:Ajs_2248 amidase; Amidase 1715620..1717170 Acidovorax ebreus TPSY 7384698 YP_002553086.1 CDS Dtpsy_1627 NC_011992.1 1717192 1718319 D PFAM: FAD dependent oxidoreductase; KEGG: ajs:Ajs_2247 FAD dependent oxidoreductase; FAD dependent oxidoreductase 1717192..1718319 Acidovorax ebreus TPSY 7384699 YP_002553087.1 CDS Dtpsy_1628 NC_011992.1 1718377 1718580 R KEGG: ajs:Ajs_2246 hypothetical protein; hypothetical protein complement(1718377..1718580) Acidovorax ebreus TPSY 7384700 YP_002553088.1 CDS Dtpsy_1629 NC_011992.1 1718737 1720149 R Catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase complement(1718737..1720149) Acidovorax ebreus TPSY 7384701 YP_002553089.1 CDS Dtpsy_1630 NC_011992.1 1720261 1720854 R PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: ajs:Ajs_2244 hypothetical protein; protein of unknown function UPF0029 complement(1720261..1720854) Acidovorax ebreus TPSY 7384702 YP_002553090.1 CDS Dtpsy_1631 NC_011992.1 1720969 1723458 D PFAM: Radical SAM domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: ajs:Ajs_2243 radical SAM domain-containing protein; Radical SAM domain protein 1720969..1723458 Acidovorax ebreus TPSY 7384703 YP_002553091.1 CDS Dtpsy_1632 NC_011992.1 1723477 1723899 R KEGG: ajs:Ajs_2242 hypothetical protein; hypothetical protein complement(1723477..1723899) Acidovorax ebreus TPSY 7384704 YP_002553092.1 CDS Dtpsy_1634 NC_011992.1 1725098 1725952 D PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: rfr:Rfer_2339 extradiol ring-cleavage dioxygenase III subunit B; Extradiol ring-cleavage dioxygenase class III protein subunit B 1725098..1725952 Acidovorax ebreus TPSY 7384706 YP_002553093.1 CDS Dtpsy_1635 NC_011992.1 1726059 1727255 R catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase complement(1726059..1727255) Acidovorax ebreus TPSY 7384707 YP_002553094.1 CDS Dtpsy_1636 NC_011992.1 1727364 1729460 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 1727364..1729460 Acidovorax ebreus TPSY 7384708 YP_002553095.1 CDS Dtpsy_1637 NC_011992.1 1729696 1730232 D TIGRFAM: transcriptional regulator, Rrf2 family; iron-sulfur cluster assembly transcription factor IscR; PFAM: protein of unknown function UPF0074; KEGG: ajs:Ajs_2145 BadM/Rrf2 family transcriptional regulator; transcriptional regulator, BadM/Rrf2 family 1729696..1730232 Acidovorax ebreus TPSY 7384709 YP_002553096.1 CDS Dtpsy_1638 NC_011992.1 1730337 1731557 D TIGRFAM: cysteine desulfurase IscS; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: ajs:Ajs_2144 cysteine desulfurase IscS; cysteine desulfurase IscS 1730337..1731557 Acidovorax ebreus TPSY 7384710 YP_002553097.1 CDS Dtpsy_1639 NC_011992.1 1731595 1731996 D TIGRFAM: FeS cluster assembly scaffold IscU; PFAM: nitrogen-fixing NifU domain protein; KEGG: ajs:Ajs_2143 FeS cluster assembly scaffold IscU; FeS cluster assembly scaffold IscU 1731595..1731996 Acidovorax ebreus TPSY 7384711 YP_002553098.1 CDS Dtpsy_1640 NC_011992.1 1732002 1732325 D TIGRFAM: iron-sulfur cluster assembly protein IscA; iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: ajs:Ajs_2142 iron-sulfur cluster assembly protein IscA; iron-sulfur cluster assembly protein IscA 1732002..1732325 Acidovorax ebreus TPSY 7384712 YP_002553099.1 CDS Dtpsy_1641 NC_011992.1 1732393 1732911 D KEGG: ajs:Ajs_2141 co-chaperone Hsc20; TIGRFAM: co-chaperone Hsc20; PFAM: heat shock protein DnaJ domain protein; HSC20 oligomerisation; SMART: heat shock protein DnaJ domain protein; co-chaperone Hsc20 1732393..1732911 Acidovorax ebreus TPSY 7384713 YP_002553100.1 CDS hscA NC_011992.1 1732978 1734846 D involved in the maturation of iron-sulfur cluster-containing proteins; chaperone protein HscA 1732978..1734846 Acidovorax ebreus TPSY 7384714 YP_002553101.1 CDS Dtpsy_1643 NC_011992.1 1734880 1735218 D TIGRFAM: ferredoxin, 2Fe-2S type, ISC system; PFAM: ferredoxin; KEGG: ajs:Ajs_2139 ferredoxin, 2Fe-2S type, ISC system; ferredoxin, 2Fe-2S type, ISC system 1734880..1735218 Acidovorax ebreus TPSY 7384715 YP_002553102.1 CDS Dtpsy_1644 NC_011992.1 1735218 1735931 D KEGG: ajs:Ajs_2138 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; DNA polymerase III, epsilon subunit 1735218..1735931 Acidovorax ebreus TPSY 7384716 YP_002553103.1 CDS Dtpsy_1645 NC_011992.1 1736278 1737315 D PFAM: histone deacetylase superfamily; KEGG: ajs:Ajs_2137 histone deacetylase superfamily protein; histone deacetylase superfamily 1736278..1737315 Acidovorax ebreus TPSY 7384719 YP_002553104.1 CDS Dtpsy_1646 NC_011992.1 1737333 1738448 D PFAM: FAD dependent oxidoreductase; KEGG: ajs:Ajs_2136 FAD dependent oxidoreductase; 2-hydroxyglutarate dehydrogenase 1737333..1738448 Acidovorax ebreus TPSY 7384720 YP_002553105.1 CDS Dtpsy_1647 NC_011992.1 1738579 1738887 D PFAM: protein of unknown function DUF883 ElaB; KEGG: ajs:Ajs_2135 protein of unknown function DUF883, ElaB; protein of unknown function DUF883 ElaB 1738579..1738887 Acidovorax ebreus TPSY 7384721 YP_002553106.1 CDS Dtpsy_1648 NC_011992.1 1738955 1739350 D KEGG: ajs:Ajs_2134 hypothetical protein; hypothetical protein 1738955..1739350 Acidovorax ebreus TPSY 7384722 YP_002553107.1 CDS Dtpsy_1649 NC_011992.1 1739347 1739670 D KEGG: ajs:Ajs_2133 hypothetical protein; hypothetical protein 1739347..1739670 Acidovorax ebreus TPSY 7384723 YP_002553108.1 CDS Dtpsy_1650 NC_011992.1 1739728 1740783 R catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 complement(1739728..1740783) Acidovorax ebreus TPSY 7384724 YP_002553109.1 CDS Dtpsy_1651 NC_011992.1 1740819 1741508 D Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 1740819..1741508 Acidovorax ebreus TPSY 7384725 YP_002553110.1 CDS Dtpsy_1652 NC_011992.1 1741560 1742216 R PFAM: glutaredoxin; KEGG: ajs:Ajs_2130 glutaredoxin; glutaredoxin complement(1741560..1742216) Acidovorax ebreus TPSY 7384726 YP_002553111.1 CDS Dtpsy_1653 NC_011992.1 1742331 1744364 R PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: ajs:Ajs_2129 oligopeptidase A; Oligopeptidase A complement(1742331..1744364) Acidovorax ebreus TPSY 7384727 YP_002553112.1 CDS Dtpsy_1654 NC_011992.1 1744452 1745300 R catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase complement(1744452..1745300) Acidovorax ebreus TPSY 7384728 YP_002553113.1 CDS Dtpsy_1655 NC_011992.1 1745379 1746005 R PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; response regulator receiver; KEGG: ajs:Ajs_2127 two component LuxR family transcriptional regulator; two component transcriptional regulator, LuxR family complement(1745379..1746005) Acidovorax ebreus TPSY 7384729 YP_002553114.1 CDS Dtpsy_1656 NC_011992.1 1746002 1748548 R KEGG: ajs:Ajs_2126 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS/PAC sensor signal transduction histidine kinase complement(1746002..1748548) Acidovorax ebreus TPSY 7384730 YP_002553115.1 CDS aceE NC_011992.1 1748718 1751414 D E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 1748718..1751414 Acidovorax ebreus TPSY 7384731 YP_002553116.1 CDS Dtpsy_1658 NC_011992.1 1751433 1753118 D KEGG: ajs:Ajs_2124 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 1751433..1753118 Acidovorax ebreus TPSY 7384732 YP_002553117.1 CDS Dtpsy_1659 NC_011992.1 1753135 1754994 D TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: biotin/lipoyl attachment domain-containing protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: ajs:Ajs_2123 dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase 1753135..1754994 Acidovorax ebreus TPSY 7384733 YP_002553118.1 CDS Dtpsy_1660 NC_011992.1 1755128 1755442 R KEGG: ajs:Ajs_2095 hypothetical protein; hypothetical protein complement(1755128..1755442) Acidovorax ebreus TPSY 7384734 YP_002553119.1 CDS Dtpsy_1661 NC_011992.1 1755568 1756527 D PFAM: Protein of unknown function methylase putative; KEGG: ajs:Ajs_2094 hypothetical protein; hypothetical protein 1755568..1756527 Acidovorax ebreus TPSY 7384735 YP_002553120.1 CDS Dtpsy_1662 NC_011992.1 1756591 1757478 D PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: ajs:Ajs_2093 6-phosphogluconate dehydrogenase, NAD-binding; 6-phosphogluconate dehydrogenase NAD-binding 1756591..1757478 Acidovorax ebreus TPSY 7384736 YP_002553121.1 CDS Dtpsy_1663 NC_011992.1 1757630 1758109 R PFAM: protein of unknown function DUF55; KEGG: ajs:Ajs_2092 hypothetical protein; protein of unknown function DUF55 complement(1757630..1758109) Acidovorax ebreus TPSY 7384737 YP_002553122.1 CDS Dtpsy_1664 NC_011992.1 1758246 1758824 R PFAM: NLP/P60 protein; KEGG: ajs:Ajs_2091 NLP/P60 protein; NLP/P60 protein complement(1758246..1758824) Acidovorax ebreus TPSY 7384738 YP_002553123.1 CDS Dtpsy_1665 NC_011992.1 1759127 1760563 D TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_2090 major facilitator superfamily transporter; drug resistance transporter, EmrB/QacA subfamily 1759127..1760563 Acidovorax ebreus TPSY 7384739 YP_002553124.1 CDS Dtpsy_1666 NC_011992.1 1760684 1762525 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_2089 ABC transporter related; ABC transporter related complement(1760684..1762525) Acidovorax ebreus TPSY 7384740 YP_002553125.1 CDS Dtpsy_1667 NC_011992.1 1762724 1765867 D KEGG: ajs:Ajs_2088 diguanylate cyclase/phosphodiesterase with PAS/PAC and CHASE sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; CHASE domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; GGDEF domain containing protein; PAC repeat-containing protein; EAL domain protein; diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s) 1762724..1765867 Acidovorax ebreus TPSY 7384741 YP_002553126.1 CDS Dtpsy_1668 NC_011992.1 1765903 1766235 D PFAM: protein of unknown function UPF0060; KEGG: ajs:Ajs_2087 hypothetical protein; protein of unknown function UPF0060 1765903..1766235 Acidovorax ebreus TPSY 7384742 YP_002553127.1 CDS Dtpsy_1669 NC_011992.1 1766410 1769934 D TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; KEGG: ajs:Ajs_2086 chromosome segregation protein SMC; chromosome segregation protein SMC 1766410..1769934 Acidovorax ebreus TPSY 7384743 YP_002553128.1 CDS Dtpsy_1670 NC_011992.1 1769948 1771090 D SMART: ZipA FtsZ-binding region; KEGG: ajs:Ajs_2085 ZipA, C-terminal FtsZ-binding region; ZipA FtsZ-binding region 1769948..1771090 Acidovorax ebreus TPSY 7384744 YP_002553129.1 CDS Dtpsy_1671 NC_011992.1 1771099 1771473 D KEGG: ajs:Ajs_2084 hypothetical protein; hypothetical protein 1771099..1771473 Acidovorax ebreus TPSY 7384745 YP_002553130.1 CDS Dtpsy_1672 NC_011992.1 1771458 1773680 D KEGG: ajs:Ajs_2083 DNA ligase, NAD-dependent; TIGRFAM: DNA ligase, NAD-dependent; PFAM: helix-hairpin-helix motif; BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; NAD-dependent DNA ligase adenylation; SMART: BRCT domain protein; Helix-hairpin-helix DNA-binding class 1; NAD-dependent DNA ligase; DNA ligase, NAD-dependent 1771458..1773680 Acidovorax ebreus TPSY 7384746 YP_002553131.1 CDS Dtpsy_1673 NC_011992.1 1773681 1774631 D PFAM: Patatin; KEGG: ajs:Ajs_2082 patatin; Patatin 1773681..1774631 Acidovorax ebreus TPSY 7384747 YP_002553132.1 CDS Dtpsy_1674 NC_011992.1 1774878 1777418 D PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: ajs:Ajs_2081 glycosyl transferase family protein; Peptidoglycan glycosyltransferase 1774878..1777418 Acidovorax ebreus TPSY 7384748 YP_002553133.1 CDS Dtpsy_1675 NC_011992.1 1777434 1778636 D PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_2080 major facilitator superfamily transporter; major facilitator superfamily MFS_1 1777434..1778636 Acidovorax ebreus TPSY 7384749 YP_002553134.1 CDS Dtpsy_1676 NC_011992.1 1778629 1779177 R PFAM: NUDIX hydrolase; KEGG: ajs:Ajs_2079 NUDIX hydrolase; NUDIX hydrolase complement(1778629..1779177) Acidovorax ebreus TPSY 7384750 YP_002553135.1 CDS Dtpsy_1677 NC_011992.1 1779248 1779943 R PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: ajs:Ajs_2078 fumarylacetoacetate (FAA) hydrolase; fumarylacetoacetate (FAA) hydrolase complement(1779248..1779943) Acidovorax ebreus TPSY 7384751 YP_002553136.1 CDS Dtpsy_1678 NC_011992.1 1780062 1780730 D TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase domain; KEGG: ajs:Ajs_2077 maleylacetoacetate isomerase; maleylacetoacetate isomerase 1780062..1780730 Acidovorax ebreus TPSY 7384752 YP_002553137.1 CDS Dtpsy_1679 NC_011992.1 1780736 1781587 D PFAM: protein of unknown function DUF152; KEGG: ajs:Ajs_2076 hypothetical protein; protein of unknown function DUF152 1780736..1781587 Acidovorax ebreus TPSY 7384753 YP_002553138.1 CDS Dtpsy_1680 NC_011992.1 1781504 1781794 R KEGG: ajs:Ajs_2075 hypothetical protein; hypothetical protein complement(1781504..1781794) Acidovorax ebreus TPSY 7384069 YP_002553139.1 CDS Dtpsy_1681 NC_011992.1 1781948 1783666 D TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I; PFAM: alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: ajs:Ajs_2074 poly(R)-hydroxyalkanoic acid synthase, class I; poly(R)-hydroxyalkanoic acid synthase, class I 1781948..1783666 Acidovorax ebreus TPSY 7385245 YP_002553140.1 CDS Dtpsy_1682 NC_011992.1 1783808 1784986 D KEGG: ajs:Ajs_2073 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase 1783808..1784986 Acidovorax ebreus TPSY 7385246 YP_002553141.1 CDS Dtpsy_1684 NC_011992.1 1785632 1786240 D PFAM: regulatory protein TetR; KEGG: ajs:Ajs_1833 TetR family transcriptional regulator; transcriptional regulator, TetR family 1785632..1786240 Acidovorax ebreus TPSY 7385248 YP_002553142.1 CDS Dtpsy_1685 NC_011992.1 1786237 1787388 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: ajs:Ajs_1834 RND family efflux transporter MFP subunit; efflux transporter, RND family, MFP subunit 1786237..1787388 Acidovorax ebreus TPSY 7385249 YP_002553143.1 CDS Dtpsy_1686 NC_011992.1 1787385 1788584 D PFAM: protein of unknown function DUF214; KEGG: ajs:Ajs_1835 hypothetical protein; protein of unknown function DUF214 1787385..1788584 Acidovorax ebreus TPSY 7385250 YP_002553144.1 CDS Dtpsy_1687 NC_011992.1 1788595 1789305 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_1836 ABC transporter related; ABC transporter related 1788595..1789305 Acidovorax ebreus TPSY 7385251 YP_002553145.1 CDS Dtpsy_1688 NC_011992.1 1789398 1790798 R TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: ajs:Ajs_1837 lytic murein transglycosylase; lytic murein transglycosylase complement(1789398..1790798) Acidovorax ebreus TPSY 7385252 YP_002553146.1 CDS sbcB NC_011992.1 1790867 1792306 D Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates; exonuclease I 1790867..1792306 Acidovorax ebreus TPSY 7385253 YP_002553147.1 CDS Dtpsy_1690 NC_011992.1 1792315 1793199 D PFAM: Silent information regulator protein Sir2; KEGG: ajs:Ajs_1839 silent information regulator protein Sir2; Silent information regulator protein Sir2 1792315..1793199 Acidovorax ebreus TPSY 7385254 YP_002553148.1 CDS Dtpsy_1691 NC_011992.1 1793270 1795273 D PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; SMART: AAA ATPase; KEGG: ajs:Ajs_1840 fis family GAF modulated sigma54 specific transcriptional regulator; GAF modulated sigma54 specific transcriptional regulator, Fis family 1793270..1795273 Acidovorax ebreus TPSY 7385255 YP_002553149.1 CDS Dtpsy_1692 NC_011992.1 1795385 1795786 R PFAM: protein of unknown function DUF779; KEGG: ajs:Ajs_1888 hypothetical protein; protein of unknown function DUF779 complement(1795385..1795786) Acidovorax ebreus TPSY 7385256 YP_002553150.1 CDS Dtpsy_1693 NC_011992.1 1795808 1796839 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ajs:Ajs_1889 alcohol dehydrogenase; Alcohol dehydrogenase GroES domain protein complement(1795808..1796839) Acidovorax ebreus TPSY 7385257 YP_002553151.1 CDS Dtpsy_1694 NC_011992.1 1796934 1798457 R PFAM: Aldehyde Dehydrogenase; KEGG: ajs:Ajs_1890 aldehyde dehydrogenase; Aldehyde Dehydrogenase complement(1796934..1798457) Acidovorax ebreus TPSY 7385258 YP_002553152.1 CDS Dtpsy_1695 NC_011992.1 1798749 1800464 R PFAM: Na+/Picotransporter; KEGG: ajs:Ajs_1891 Na+/Pi-cotransporter; Na+/Picotransporter complement(1798749..1800464) Acidovorax ebreus TPSY 7385259 YP_002553153.1 CDS Dtpsy_1696 NC_011992.1 1800744 1803236 D PFAM: protein of unknown function UPF0118; GAF domain protein; SMART: GAF domain protein; KEGG: ajs:Ajs_1892 putative GAF sensor protein; putative phytochrome sensor protein 1800744..1803236 Acidovorax ebreus TPSY 7385260 YP_002553154.1 CDS upp NC_011992.1 1803323 1803952 R Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase complement(1803323..1803952) Acidovorax ebreus TPSY 7385261 YP_002553155.1 CDS Dtpsy_1698 NC_011992.1 1804075 1805061 R PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: aav:Aave_3217 pyridoxal-5'-phosphate-dependent enzyme, beta subunit; Pyridoxal-5'-phosphate-dependent protein beta subunit complement(1804075..1805061) Acidovorax ebreus TPSY 7385262 YP_002553156.1 CDS Dtpsy_1699 NC_011992.1 1805232 1806074 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: aav:Aave_3216 enoyl-CoA hydratase/isomerase; Enoyl-CoA hydratase/isomerase complement(1805232..1806074) Acidovorax ebreus TPSY 7385263 YP_002553157.1 CDS Dtpsy_1700 NC_011992.1 1806342 1807046 D PFAM: protein of unknown function DUF28; KEGG: dac:Daci_3517 hypothetical protein; hypothetical protein 1806342..1807046 Acidovorax ebreus TPSY 7385264 YP_002553158.1 CDS Dtpsy_1701 NC_011992.1 1807139 1807840 R PFAM: Glutathione S-transferase domain; KEGG: aav:Aave_3215 glutathione S-transferase, N-terminal domain; Glutathione S-transferase domain protein complement(1807139..1807840) Acidovorax ebreus TPSY 7385265 YP_002553159.1 CDS Dtpsy_1702 NC_011992.1 1807913 1809421 R PFAM: protein of unknown function DUF853 NPT hydrolase putative; SMART: AAA ATPase; KEGG: ajs:Ajs_1897 protein of unknown function DUF853, NPT hydrolase putative; protein of unknown function DUF853 NPT hydrolase putative complement(1807913..1809421) Acidovorax ebreus TPSY 7385266 YP_002553160.1 CDS Dtpsy_1703 NC_011992.1 1809492 1810211 D PFAM: protein of unknown function DUF28; KEGG: ajs:Ajs_1898 hypothetical protein; hypothetical protein 1809492..1810211 Acidovorax ebreus TPSY 7385267 YP_002553161.1 CDS Dtpsy_1704 NC_011992.1 1810233 1811519 D catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 1810233..1811519 Acidovorax ebreus TPSY 7385268 YP_002553162.1 CDS Dtpsy_1705 NC_011992.1 1811516 1812535 D catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 1811516..1812535 Acidovorax ebreus TPSY 7385269 YP_002553163.1 CDS Dtpsy_1706 NC_011992.1 1812706 1813494 D TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: ajs:Ajs_1901 iojap-like protein; iojap-like protein 1812706..1813494 Acidovorax ebreus TPSY 7385270 YP_002553164.1 CDS Dtpsy_1707 NC_011992.1 1813510 1813977 D SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 1813510..1813977 Acidovorax ebreus TPSY 7385271 YP_002553165.1 CDS Dtpsy_1708 NC_011992.1 1814029 1814655 D TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: ajs:Ajs_1903 maf protein; maf protein 1814029..1814655 Acidovorax ebreus TPSY 7385272 YP_002553166.1 CDS Dtpsy_1709 NC_011992.1 1814683 1815447 R PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: ajs:Ajs_1904 CRP/FNR family transcriptional regulator; transcriptional regulator, Crp/Fnr family complement(1814683..1815447) Acidovorax ebreus TPSY 7385273 YP_002553167.1 CDS Dtpsy_1710 NC_011992.1 1815501 1817201 R PFAM: cytochrome d1 heme region; KEGG: ajs:Ajs_1905 cytochrome d1, heme region; cytochrome d1 heme region complement(1815501..1817201) Acidovorax ebreus TPSY 7385274 YP_002553168.1 CDS Dtpsy_1711 NC_011992.1 1817194 1818414 R PFAM: Radical SAM domain protein; KEGG: ajs:Ajs_1906 radical SAM domain-containing protein; Radical SAM domain protein complement(1817194..1818414) Acidovorax ebreus TPSY 7385275 YP_002553169.1 CDS Dtpsy_1712 NC_011992.1 1818417 1818899 R KEGG: ajs:Ajs_1907 AsnC family transcriptional regulator; putative transcriptional regulator, AsnC family complement(1818417..1818899) Acidovorax ebreus TPSY 7385276 YP_002553170.1 CDS Dtpsy_1713 NC_011992.1 1818889 1819371 R KEGG: ajs:Ajs_1908 AsnC family transcriptional regulator; putative transcriptional regulator, AsnC family complement(1818889..1819371) Acidovorax ebreus TPSY 7385277 YP_002553171.1 CDS Dtpsy_1714 NC_011992.1 1819358 1820404 R KEGG: ajs:Ajs_1909 AsnC family transcriptional regulator; putative transcriptional regulator, AsnC family complement(1819358..1820404) Acidovorax ebreus TPSY 7385278 YP_002553172.1 CDS Dtpsy_1715 NC_011992.1 1820408 1821622 R PFAM: cytochrome d1 heme region; KEGG: ajs:Ajs_1910 cytochrome d1, heme region; cytochrome d1 heme region complement(1820408..1821622) Acidovorax ebreus TPSY 7385279 YP_002553173.1 CDS Dtpsy_1716 NC_011992.1 1821619 1821963 R KEGG: ajs:Ajs_1911 hypothetical protein; hypothetical protein complement(1821619..1821963) Acidovorax ebreus TPSY 7385280 YP_002553174.1 CDS Dtpsy_1717 NC_011992.1 1821983 1823707 R PFAM: cytochrome d1 heme region; KEGG: ajs:Ajs_1912 nitrite reductase (NO-forming); Hydroxylamine reductase complement(1821983..1823707) Acidovorax ebreus TPSY 7385281 YP_002553175.1 CDS Dtpsy_1718 NC_011992.1 1823798 1824742 D TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: ajs:Ajs_1913 uroporphyrin-III C-methyltransferase; uroporphyrin-III C-methyltransferase 1823798..1824742 Acidovorax ebreus TPSY 7385282 YP_002553176.1 CDS Dtpsy_1719 NC_011992.1 1824819 1826306 D KEGG: ajs:Ajs_1914 ribonuclease G; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; ribonuclease E and G; SMART: RNA binding S1 domain protein; ribonuclease, Rne/Rng family 1824819..1826306 Acidovorax ebreus TPSY 7385283 YP_002553177.1 CDS Dtpsy_1720 NC_011992.1 1826714 1827865 R catalyzes the transfer of an amino moiety; putative aminotransferase complement(1826714..1827865) Acidovorax ebreus TPSY 7385284 YP_002553178.1 CDS Dtpsy_1721 NC_011992.1 1828006 1828947 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_1917 transcriptional regulator CysB-like protein; transcriptional regulator CysB-like protein complement(1828006..1828947) Acidovorax ebreus TPSY 7385285 YP_002553179.1 CDS Dtpsy_1722 NC_011992.1 1829022 1829405 R PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: ajs:Ajs_1918 cobalamin (vitamin B12) biosynthesis CbiX protein; cobalamin (vitamin B12) biosynthesis CbiX protein complement(1829022..1829405) Acidovorax ebreus TPSY 7385286 YP_002553180.1 CDS Dtpsy_1723 NC_011992.1 1829424 1830533 R PFAM: permease YjgP/YjgQ family protein; KEGG: ajs:Ajs_1919 permease YjgP/YjgQ family protein; permease YjgP/YjgQ family protein complement(1829424..1830533) Acidovorax ebreus TPSY 7385287 YP_002553181.1 CDS Dtpsy_1724 NC_011992.1 1830530 1831621 R PFAM: permease YjgP/YjgQ family protein; KEGG: ajs:Ajs_1920 permease YjgP/YjgQ family protein; permease YjgP/YjgQ family protein complement(1830530..1831621) Acidovorax ebreus TPSY 7385288 YP_002553182.1 CDS Dtpsy_1725 NC_011992.1 1831645 1833135 D PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: ajs:Ajs_1921 PepA aminopeptidase; Leucyl aminopeptidase 1831645..1833135 Acidovorax ebreus TPSY 7385289 YP_002553183.1 CDS Dtpsy_1726 NC_011992.1 1833161 1833601 D PFAM: DNA polymerase III chi subunit HolC; KEGG: ajs:Ajs_1922 DNA polymerase III chi subunit, HolC; DNA polymerase III chi subunit HolC 1833161..1833601 Acidovorax ebreus TPSY 7385290 YP_002553184.1 CDS Dtpsy_1727 NC_011992.1 1833598 1834029 D KEGG: ajs:Ajs_1923 hypothetical protein; hypothetical protein 1833598..1834029 Acidovorax ebreus TPSY 7385291 YP_002553185.1 CDS Dtpsy_1728 NC_011992.1 1834169 1835296 D PFAM: Extracellular ligand-binding receptor; KEGG: aav:Aave_3159 extracellular ligand-binding receptor; Extracellular ligand-binding receptor 1834169..1835296 Acidovorax ebreus TPSY 7385292 YP_002553186.1 CDS Dtpsy_1729 NC_011992.1 1835381 1836388 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: ajs:Ajs_1926 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding complement(1835381..1836388) Acidovorax ebreus TPSY 7385293 YP_002553187.1 CDS Dtpsy_1730 NC_011992.1 1836650 1837162 D KEGG: ajs:Ajs_1927 hypothetical protein; hypothetical protein 1836650..1837162 Acidovorax ebreus TPSY 7385294 YP_002553188.1 CDS Dtpsy_1731 NC_011992.1 1837298 1838050 D KEGG: ajs:Ajs_1928 hypothetical protein; hypothetical protein 1837298..1838050 Acidovorax ebreus TPSY 7385295 YP_002553189.1 CDS Dtpsy_1732 NC_011992.1 1838145 1838585 D PFAM: UspA domain protein; KEGG: ajs:Ajs_1929 UspA domain-containing protein; UspA domain protein 1838145..1838585 Acidovorax ebreus TPSY 7385296 YP_002553190.1 CDS Dtpsy_1733 NC_011992.1 1838679 1839671 R PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_1930 hypothetical protein; hypothetical protein complement(1838679..1839671) Acidovorax ebreus TPSY 7385297 YP_002553191.1 CDS Dtpsy_1734 NC_011992.1 1839810 1840994 R catalyzes the formation of beta-ketovaleryl-CoA from acetyl-CoA and propionyl-CoA; beta-ketothiolase complement(1839810..1840994) Acidovorax ebreus TPSY 7385298 YP_002553192.1 CDS Dtpsy_1735 NC_011992.1 1841104 1841886 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ajs:Ajs_1932 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(1841104..1841886) Acidovorax ebreus TPSY 7385299 YP_002553193.1 CDS Dtpsy_1736 NC_011992.1 1841918 1842586 R PFAM: pseudouridine synthase; KEGG: ajs:Ajs_1933 ribosomal large subunit pseudouridine synthase A; pseudouridine synthase complement(1841918..1842586) Acidovorax ebreus TPSY 7385300 YP_002553194.1 CDS Dtpsy_1737 NC_011992.1 1842642 1844804 R KEGG: ajs:Ajs_1934 signal transduction histidine kinase, nitrogen specific, NtrB; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; signal transduction histidine kinase, nitrogen specific, NtrB complement(1842642..1844804) Acidovorax ebreus TPSY 7385301 YP_002553195.1 CDS Dtpsy_1738 NC_011992.1 1844880 1845281 R PFAM: peptidylprolyl isomerase FKBP-type; KEGG: ajs:Ajs_1935 peptidylprolyl isomerase, FKBP-type; Peptidylprolyl isomerase complement(1844880..1845281) Acidovorax ebreus TPSY 7385302 YP_002553196.1 CDS Dtpsy_1739 NC_011992.1 1845352 1848246 R acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase complement(1845352..1848246) Acidovorax ebreus TPSY 7385303 YP_002553197.1 CDS Dtpsy_1740 NC_011992.1 1848315 1848689 R TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; KEGG: ajs:Ajs_1937 glycine cleavage system H protein; glycine cleavage system H protein complement(1848315..1848689) Acidovorax ebreus TPSY 7385304 YP_002553198.1 CDS Dtpsy_1741 NC_011992.1 1848793 1849923 R TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: ajs:Ajs_1938 glycine cleavage system T protein; glycine cleavage system T protein complement(1848793..1849923) Acidovorax ebreus TPSY 7385305 YP_002553199.1 CDS Dtpsy_1742 NC_011992.1 1850205 1851482 R TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: ajs:Ajs_1939 TRAP dicarboxylate transporter, DctM subunit; TRAP dicarboxylate transporter, DctM subunit complement(1850205..1851482) Acidovorax ebreus TPSY 7385306 YP_002553200.1 CDS Dtpsy_1743 NC_011992.1 1851565 1852059 R PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: ajs:Ajs_1940 tripartite ATP-independent periplasmic transporter DctQ; Tripartite ATP-independent periplasmic transporter DctQ component complement(1851565..1852059) Acidovorax ebreus TPSY 7385307 YP_002553201.1 CDS Dtpsy_1744 NC_011992.1 1852137 1853108 R TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: ajs:Ajs_1941 TRAP dicarboxylate transporter, DctP subunit; TRAP dicarboxylate transporter, DctP subunit complement(1852137..1853108) Acidovorax ebreus TPSY 7385308 YP_002553202.1 CDS Dtpsy_1745 NC_011992.1 1853393 1853860 D PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: ajs:Ajs_1942 AsnC family transcriptional regulator; transcriptional regulator, AsnC family 1853393..1853860 Acidovorax ebreus TPSY 7385309 YP_002553203.1 CDS Dtpsy_1746 NC_011992.1 1853883 1855889 R PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ajs:Ajs_1943 TonB-dependent receptor; TonB-dependent receptor complement(1853883..1855889) Acidovorax ebreus TPSY 7385310 YP_002553204.1 CDS Dtpsy_1747 NC_011992.1 1856003 1857016 D PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ajs:Ajs_1946 AraC family transcriptional regulator; transcriptional regulator, AraC family 1856003..1857016 Acidovorax ebreus TPSY 7385311 YP_002553205.1 CDS Dtpsy_1748 NC_011992.1 1857107 1857901 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_1947 ABC transporter related; ABC transporter related complement(1857107..1857901) Acidovorax ebreus TPSY 7385312 YP_002553206.1 CDS Dtpsy_1749 NC_011992.1 1857918 1858805 R PFAM: inner-membrane translocator; KEGG: ajs:Ajs_1948 inner-membrane translocator; inner-membrane translocator complement(1857918..1858805) Acidovorax ebreus TPSY 7385313 YP_002553207.1 CDS Dtpsy_1750 NC_011992.1 1858911 1859879 R PFAM: protein of unknown function DUF534; KEGG: ajs:Ajs_1949 hypothetical protein; protein of unknown function DUF534 complement(1858911..1859879) Acidovorax ebreus TPSY 7385314 YP_002553208.1 CDS Dtpsy_1751 NC_011992.1 1860098 1861804 R PFAM: FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: ajs:Ajs_1950 electron-transferring-flavoprotein dehydrogenase; Electron-transferring-flavoprotein dehydrogenase complement(1860098..1861804) Acidovorax ebreus TPSY 7385315 YP_002553209.1 CDS Dtpsy_1752 NC_011992.1 1862321 1863892 D PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; SMART: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: ajs:Ajs_1951 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1862321..1863892 Acidovorax ebreus TPSY 7385316 YP_002553210.1 CDS Dtpsy_1753 NC_011992.1 1863961 1865316 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ajs:Ajs_1952 integral membrane sensor signal transduction histidine kinase; histidine kinase complement(1863961..1865316) Acidovorax ebreus TPSY 7385317 YP_002553211.1 CDS Dtpsy_1754 NC_011992.1 1865313 1865993 R PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: ajs:Ajs_1953 two component transcriptional regulator; two component transcriptional regulator, winged helix family complement(1865313..1865993) Acidovorax ebreus TPSY 7385318 YP_002553212.1 CDS Dtpsy_1755 NC_011992.1 1866135 1866836 D KEGG: ajs:Ajs_1954 PAP2 (acid phosphatase) superfamily protein-like protein; PAP2 (acid phosphatase) superfamily protein-like protein 1866135..1866836 Acidovorax ebreus TPSY 7385319 YP_002553213.1 CDS Dtpsy_1756 NC_011992.1 1867000 1868652 D PFAM: sulfatase; protein of unknown function DUF1705; KEGG: ajs:Ajs_1955 sulfatase; sulfatase 1867000..1868652 Acidovorax ebreus TPSY 7385320 YP_002553214.1 CDS Dtpsy_1757 NC_011992.1 1868716 1869297 R TIGRFAM: alkylhydroperoxidase like protein, AhpD family; uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase; KEGG: ajs:Ajs_1956 uncharacterized peroxidase-related enzyme; uncharacterized peroxidase-related enzyme complement(1868716..1869297) Acidovorax ebreus TPSY 7385321 YP_002553215.1 CDS Dtpsy_1758 NC_011992.1 1869314 1869997 R PFAM: DTW domain containing protein; KEGG: ajs:Ajs_1957 DTW domain-containing protein; DTW domain containing protein complement(1869314..1869997) Acidovorax ebreus TPSY 7385322 YP_002553216.1 CDS Dtpsy_1759 NC_011992.1 1870104 1871555 R PFAM: Catalase domain protein; KEGG: ajs:Ajs_1958 catalase; Catalase complement(1870104..1871555) Acidovorax ebreus TPSY 7385323 YP_002553217.1 CDS Dtpsy_1760 NC_011992.1 1871731 1873011 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ajs:Ajs_1959 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase 1871731..1873011 Acidovorax ebreus TPSY 7385324 YP_002553218.1 CDS Dtpsy_1761 NC_011992.1 1873131 1873676 R KEGG: ajs:Ajs_1960 LuxR family transcriptional regulator; TIGRFAM: PAS sensor protein; PFAM: regulatory protein LuxR; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; regulatory protein LuxR; transcriptional regulator, LuxR family complement(1873131..1873676) Acidovorax ebreus TPSY 7385325 YP_002553219.1 CDS Dtpsy_1762 NC_011992.1 1873759 1874466 D KEGG: ajs:Ajs_1961 3-oxoacid CoA-transferase, A subunit; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase, A subunit 1873759..1874466 Acidovorax ebreus TPSY 7382285 YP_002553220.1 CDS Dtpsy_1763 NC_011992.1 1874470 1875108 D KEGG: ajs:Ajs_1962 butyryl-CoA:acetate CoA transferase; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase, B subunit 1874470..1875108 Acidovorax ebreus TPSY 7382529 YP_002553221.1 CDS Dtpsy_1764 NC_011992.1 1875259 1876572 D PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: ajs:Ajs_1963 metal dependent phosphohydrolase; metal dependent phosphohydrolase 1875259..1876572 Acidovorax ebreus TPSY 7382530 YP_002553222.1 CDS Dtpsy_1765 NC_011992.1 1876688 1877455 D KEGG: ajs:Ajs_1965 hypothetical protein; hypothetical protein 1876688..1877455 Acidovorax ebreus TPSY 7382531 YP_002553223.1 CDS Dtpsy_1766 NC_011992.1 1877421 1878830 D KEGG: ajs:Ajs_1966 hypothetical protein; hypothetical protein 1877421..1878830 Acidovorax ebreus TPSY 7382532 YP_002553224.1 CDS Dtpsy_1767 NC_011992.1 1878827 1882012 D KEGG: ajs:Ajs_1967 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein; DNA polymerase III, alpha subunit 1878827..1882012 Acidovorax ebreus TPSY 7382533 YP_002553225.1 CDS Dtpsy_1768 NC_011992.1 1882076 1883329 R PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; KEGG: ajs:Ajs_1968 Sel1 domain-containing protein; Sel1 domain protein repeat-containing protein complement(1882076..1883329) Acidovorax ebreus TPSY 7382534 YP_002553226.1 CDS Dtpsy_1769 NC_011992.1 1883365 1885110 R KEGG: ajs:Ajs_1969 hypothetical protein; hypothetical protein complement(1883365..1885110) Acidovorax ebreus TPSY 7382535 YP_002553227.1 CDS Dtpsy_1770 NC_011992.1 1885205 1885624 R KEGG: ajs:Ajs_1970 hypothetical protein; hypothetical protein complement(1885205..1885624) Acidovorax ebreus TPSY 7382536 YP_002553228.1 CDS Dtpsy_1771 NC_011992.1 1885691 1886281 R KEGG: ajs:Ajs_1971 hypothetical protein; hypothetical protein complement(1885691..1886281) Acidovorax ebreus TPSY 7382537 YP_002553229.1 CDS Dtpsy_1772 NC_011992.1 1886919 1887707 D PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; response regulator receiver; KEGG: dac:Daci_3380 two component LuxR family transcriptional regulator; two component transcriptional regulator, LuxR family 1886919..1887707 Acidovorax ebreus TPSY 7382538 YP_002553230.1 CDS Dtpsy_1773 NC_011992.1 1887771 1888604 D PFAM: ATP-binding region ATPase domain protein; KEGG: dac:Daci_3381 putative signal transduction histidine kinase; putative signal transduction histidine kinase 1887771..1888604 Acidovorax ebreus TPSY 7382539 YP_002553231.1 CDS Dtpsy_1774 NC_011992.1 1888695 1890980 R PFAM: AsmA family protein; KEGG: aav:Aave_2673 AsmA family protein; AsmA family protein complement(1888695..1890980) Acidovorax ebreus TPSY 7382540 YP_002553232.1 CDS Dtpsy_1775 NC_011992.1 1891142 1891453 D hypothetical protein 1891142..1891453 Acidovorax ebreus TPSY 7382541 YP_002553233.1 CDS Dtpsy_1776 NC_011992.1 1891471 1891734 D hypothetical protein 1891471..1891734 Acidovorax ebreus TPSY 7382542 YP_002553234.1 CDS Dtpsy_1777 NC_011992.1 1891856 1892770 D PFAM: pseudouridine synthase; KEGG: dac:Daci_4251 pseudouridine synthase; pseudouridine synthase 1891856..1892770 Acidovorax ebreus TPSY 7382543 YP_002553235.1 CDS Dtpsy_1778 NC_011992.1 1893079 1894569 R TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: ajs:Ajs_1978 succinate semialdehyde dehydrogenase; succinic semialdehyde dehydrogenase complement(1893079..1894569) Acidovorax ebreus TPSY 7382545 YP_002553236.1 CDS alaS NC_011992.1 1894714 1897338 D Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 1894714..1897338 Acidovorax ebreus TPSY 7382546 YP_002553237.1 CDS Dtpsy_1780 NC_011992.1 1897488 1898492 R KEGG: ajs:Ajs_1980 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(1897488..1898492) Acidovorax ebreus TPSY 7382547 YP_002553238.1 CDS trmB NC_011992.1 1898513 1899295 R tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase complement(1898513..1899295) Acidovorax ebreus TPSY 7382548 YP_002553239.1 CDS Dtpsy_1782 NC_011992.1 1899265 1900236 R PFAM: glutamyl-tRNA synthetase class Ic; KEGG: ajs:Ajs_1982 glutamate--tRNA ligase; Glutamate--tRNA ligase complement(1899265..1900236) Acidovorax ebreus TPSY 7382549 YP_002553240.1 CDS Dtpsy_1783 NC_011992.1 1900233 1901336 R PFAM: FAD dependent oxidoreductase; KEGG: ajs:Ajs_1983 FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(1900233..1901336) Acidovorax ebreus TPSY 7382550 YP_002553241.1 CDS Dtpsy_1784 NC_011992.1 1901433 1902371 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_1984 LysR family transcriptional regulator; transcriptional regulator, LysR family complement(1901433..1902371) Acidovorax ebreus TPSY 7382551 YP_002553242.1 CDS Dtpsy_1785 NC_011992.1 1902489 1903190 D PFAM: Pirin domain protein; Cupin 2 conserved barrel domain protein; KEGG: ajs:Ajs_1985 pirin domain-containing protein; Pirin domain protein 1902489..1903190 Acidovorax ebreus TPSY 7382552 YP_002553243.1 CDS Dtpsy_1786 NC_011992.1 1903227 1903640 D PFAM: DoxX family protein; KEGG: ajs:Ajs_1986 DoxX family protein; DoxX family protein 1903227..1903640 Acidovorax ebreus TPSY 7382553 YP_002553244.1 CDS Dtpsy_1787 NC_011992.1 1903712 1904452 R Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase complement(1903712..1904452) Acidovorax ebreus TPSY 7382554 YP_002553245.1 CDS aat NC_011992.1 1904449 1905201 R leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase complement(1904449..1905201) Acidovorax ebreus TPSY 7382555 YP_002553246.1 CDS Dtpsy_1789 NC_011992.1 1905252 1905680 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ajs:Ajs_1989 glyoxalase/bleomycin resistance protein/dioxygenase; Glyoxalase/bleomycin resistance protein/dioxygenase complement(1905252..1905680) Acidovorax ebreus TPSY 7382556 YP_002553247.1 CDS Dtpsy_1790 NC_011992.1 1905770 1907107 R PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: ajs:Ajs_1990 glucarate dehydratase; Glucarate dehydratase complement(1905770..1907107) Acidovorax ebreus TPSY 7382557 YP_002553248.1 CDS Dtpsy_1791 NC_011992.1 1907150 1908136 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: ajs:Ajs_1991 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding complement(1907150..1908136) Acidovorax ebreus TPSY 7382558 YP_002553249.1 CDS Dtpsy_1792 NC_011992.1 1908204 1909157 R PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_1992 hypothetical protein; hypothetical protein complement(1908204..1909157) Acidovorax ebreus TPSY 7382559 YP_002553250.1 CDS Dtpsy_1793 NC_011992.1 1909227 1910138 R catalyzes the formation of 2,5-dioxopentanoate from 5-dehydro-4-deoxy-D-glucarate; 5-dehydro-4-deoxyglucarate dehydratase complement(1909227..1910138) Acidovorax ebreus TPSY 7382560 YP_002553251.1 CDS Dtpsy_1794 NC_011992.1 1910217 1911185 R PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_1994 hypothetical protein; hypothetical protein complement(1910217..1911185) Acidovorax ebreus TPSY 7382561 YP_002553252.1 CDS Dtpsy_1795 NC_011992.1 1911294 1912112 R PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH; KEGG: ajs:Ajs_1995 GntR family transcriptional regulator; GntR domain protein complement(1911294..1912112) Acidovorax ebreus TPSY 7382562 YP_002553253.1 CDS Dtpsy_1796 NC_011992.1 1912200 1913507 D PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: ajs:Ajs_1996 mandelate racemase/muconate lactonizing protein; Mandelate racemase/muconate lactonizing protein 1912200..1913507 Acidovorax ebreus TPSY 7382563 YP_002553254.1 CDS Dtpsy_1797 NC_011992.1 1913539 1914543 D PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_1997 hypothetical protein; hypothetical protein 1913539..1914543 Acidovorax ebreus TPSY 7382564 YP_002553255.1 CDS Dtpsy_1798 NC_011992.1 1914716 1915309 D PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: ajs:Ajs_1999 gluconolactonase; SMP-30/Gluconolaconase/LRE domain protein 1914716..1915309 Acidovorax ebreus TPSY 7382565 YP_002553256.1 CDS Dtpsy_1799 NC_011992.1 1915595 1915933 R PFAM: protein of unknown function DUF469; KEGG: ajs:Ajs_2000 hypothetical protein; protein of unknown function DUF469 complement(1915595..1915933) Acidovorax ebreus TPSY 7382566 YP_002553257.1 CDS Dtpsy_1800 NC_011992.1 1916001 1917209 R catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta complement(1916001..1917209) Acidovorax ebreus TPSY 7382567 YP_002553258.1 CDS Dtpsy_1801 NC_011992.1 1917425 1917811 D KEGG: ajs:Ajs_2002 hypothetical protein; hypothetical protein 1917425..1917811 Acidovorax ebreus TPSY 7382568 YP_002553259.1 CDS Dtpsy_1802 NC_011992.1 1918319 1919281 D KEGG: bxe:Bxe_C1207 putative chromate resistance protein; putative chromate resistance protein 1918319..1919281 Acidovorax ebreus TPSY 7382569 YP_002553260.1 CDS Dtpsy_1803 NC_011992.1 1919307 1920509 D TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: pol:Bpro_2503 chromate transporter; chromate transporter, chromate ion transporter (CHR) family 1919307..1920509 Acidovorax ebreus TPSY 7382570 YP_002553261.1 CDS Dtpsy_1804 NC_011992.1 1920541 1921323 R PFAM: zinc/iron permease; KEGG: pna:Pnap_1484 zinc/iron permease; zinc/iron permease complement(1920541..1921323) Acidovorax ebreus TPSY 7382571 YP_002553262.1 CDS Dtpsy_1805 NC_011992.1 1921397 1922083 R KEGG: maq:Maqu_3197 putative (L31491) ORF2; putative (plasmid pTOM9); hypothetical protein complement(1921397..1922083) Acidovorax ebreus TPSY 7382572 YP_002553263.1 CDS Dtpsy_1806 NC_011992.1 1922094 1922828 R KEGG: ppw:PputW619_5164 hypothetical protein; hypothetical protein complement(1922094..1922828) Acidovorax ebreus TPSY 7382573 YP_002553264.1 CDS Dtpsy_1807 NC_011992.1 1923422 1923703 D PFAM: protein of unknown function DUF156; KEGG: pcr:Pcryo_1769 hypothetical protein; protein of unknown function DUF156 1923422..1923703 Acidovorax ebreus TPSY 7382574 YP_002553265.1 CDS Dtpsy_1808 NC_011992.1 1923765 1924835 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: rme:Rmet_6211 protein of unknown function DUF6, transmembrane; protein of unknown function DUF6 transmembrane 1923765..1924835 Acidovorax ebreus TPSY 7382575 YP_002553266.1 CDS Dtpsy_1809 NC_011992.1 1924995 1925882 R KEGG: ajs:Ajs_2005 3-hydroxyisobutyrate dehydrogenase; TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: TrkA-N domain protein; NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; 3-hydroxyisobutyrate dehydrogenase complement(1924995..1925882) Acidovorax ebreus TPSY 7382576 YP_002553267.1 CDS Dtpsy_1810 NC_011992.1 1925975 1926379 R KEGG: ajs:Ajs_2006 hypothetical protein; hypothetical protein complement(1925975..1926379) Acidovorax ebreus TPSY 7382577 YP_002553268.1 CDS Dtpsy_1811 NC_011992.1 1926449 1927615 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_2007 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase domain protein complement(1926449..1927615) Acidovorax ebreus TPSY 7382578 YP_002553269.1 CDS Dtpsy_1812 NC_011992.1 1927642 1928070 R PFAM: protein of unknown function DUF1311; KEGG: ajs:Ajs_2008 hypothetical protein; protein of unknown function DUF1311 complement(1927642..1928070) Acidovorax ebreus TPSY 7382579 YP_002553270.1 CDS Dtpsy_1813 NC_011992.1 1928109 1929632 R TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: ajs:Ajs_2009 methylmalonate-semialdehyde dehydrogenase [acylating]; methylmalonate-semialdehyde dehydrogenase complement(1928109..1929632) Acidovorax ebreus TPSY 7382580 YP_002553271.1 CDS Dtpsy_1814 NC_011992.1 1929789 1930700 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_2010 LysR family transcriptional regulator; transcriptional regulator, LysR family 1929789..1930700 Acidovorax ebreus TPSY 7382581 YP_002553272.1 CDS Dtpsy_1815 NC_011992.1 1930770 1931558 R KEGG: ajs:Ajs_2011 hypothetical protein; hypothetical protein complement(1930770..1931558) Acidovorax ebreus TPSY 7382582 YP_002553273.1 CDS Dtpsy_1816 NC_011992.1 1931606 1931776 R hypothetical protein complement(1931606..1931776) Acidovorax ebreus TPSY 7382583 YP_002553274.1 CDS Dtpsy_1817 NC_011992.1 1931932 1932945 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pna:Pnap_2744 short chain dehydrogenase; short chain dehydrogenase complement(1931932..1932945) Acidovorax ebreus TPSY 7382584 YP_002553275.1 CDS Dtpsy_1818 NC_011992.1 1933169 1933444 R KEGG: ajs:Ajs_0331 hypothetical protein; hypothetical protein complement(1933169..1933444) Acidovorax ebreus TPSY 7382585 YP_002553276.1 CDS Dtpsy_1819 NC_011992.1 1933591 1934169 R KEGG: aav:Aave_2521 hypothetical protein; hypothetical protein complement(1933591..1934169) Acidovorax ebreus TPSY 7382586 YP_002553277.1 CDS Dtpsy_1820 NC_011992.1 1934541 1934777 D KEGG: afw:Anae109_1004 hypothetical protein; hypothetical protein 1934541..1934777 Acidovorax ebreus TPSY 7382587 YP_002553278.1 CDS Dtpsy_1821 NC_011992.1 1934806 1935279 D PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: ajs:Ajs_2012 CBS domain-containing protein; CBS domain containing protein 1934806..1935279 Acidovorax ebreus TPSY 7382588 YP_002553279.1 CDS Dtpsy_1822 NC_011992.1 1935333 1935491 R KEGG: ajs:Ajs_2013 hypothetical protein; hypothetical protein complement(1935333..1935491) Acidovorax ebreus TPSY 7382589 YP_002553280.1 CDS Dtpsy_1823 NC_011992.1 1935846 1937036 D PFAM: NHL repeat containing protein; glucose sorbosone dehydrogenase; KEGG: ajs:Ajs_2014 glucose sorbosone dehydrogenase; glucose sorbosone dehydrogenase 1935846..1937036 Acidovorax ebreus TPSY 7382590 YP_002553281.1 CDS Dtpsy_1824 NC_011992.1 1937192 1937806 D PFAM: isochorismatase hydrolase; KEGG: ajs:Ajs_2015 isochorismatase hydrolase; isochorismatase hydrolase 1937192..1937806 Acidovorax ebreus TPSY 7382591 YP_002553282.1 CDS prpE NC_011992.1 1938011 1939906 D catalyzes the formation of propionyl-CoA using propionate as a substrate; PrpE from Ralstonia solanacearum can produce acetyl-, propionyl-, butyryl- and acrylyl-coenzyme A, and Salmonella enterica produces propionyl- and butyryl-coenzyme A; not expressed in Escherichia coli when grown on propionate/minimal media; ATP-dependent; propionyl-CoA synthetase 1938011..1939906 Acidovorax ebreus TPSY 7382592 YP_002553283.1 CDS Dtpsy_1826 NC_011992.1 1939995 1943879 R KEGG: ajs:Ajs_2017 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; GGDEF domain containing protein; PAC repeat-containing protein; EAL domain protein; diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) complement(1939995..1943879) Acidovorax ebreus TPSY 7382593 YP_002553284.1 CDS Dtpsy_1827 NC_011992.1 1944105 1945043 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: ajs:Ajs_2018 hypothetical protein; protein of unknown function DUF6 transmembrane complement(1944105..1945043) Acidovorax ebreus TPSY 7382594 YP_002553285.1 CDS Dtpsy_1828 NC_011992.1 1945040 1945588 R KEGG: ajs:Ajs_2019 methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; methylated-DNA/protein-cysteine methyltransferase complement(1945040..1945588) Acidovorax ebreus TPSY 7382595 YP_002553286.1 CDS Dtpsy_1829 NC_011992.1 1945649 1947202 R PFAM: helix-turn-helix- domain containing protein AraC type; HhH-GPD family protein; Ada metal-binding domain protein; AlkA domain protein; SMART: helix-turn-helix- domain containing protein AraC type; HhH-GPD family protein; KEGG: ajs:Ajs_2020 DNA-O6-methylguanine--protein-cysteine S-methyltransferase / DNA-3-methyladenine glycosylase II / transcriptional regulator Ada; transcriptional regulator, AraC family complement(1945649..1947202) Acidovorax ebreus TPSY 7382596 YP_002553287.1 CDS Dtpsy_1830 NC_011992.1 1947399 1948787 D PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: ajs:Ajs_2021 phosphomannomutase; Phosphomannomutase 1947399..1948787 Acidovorax ebreus TPSY 7382597 YP_002553288.1 CDS Dtpsy_1831 NC_011992.1 1948804 1950165 D PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: ajs:Ajs_2022 3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein; Three-deoxy-D-manno-octulosonic-acid transferase domain protein 1948804..1950165 Acidovorax ebreus TPSY 7382598 YP_002553289.1 CDS Dtpsy_1832 NC_011992.1 1950291 1952996 D PFAM: GCN5-related N-acetyltransferase; KEGG: ajs:Ajs_2023 GCN5-related N-acetyltransferase; GCN5-related N-acetyltransferase 1950291..1952996 Acidovorax ebreus TPSY 7382599 YP_002553290.1 CDS Dtpsy_1833 NC_011992.1 1953003 1953356 D KEGG: ajs:Ajs_2024 hypothetical protein; hypothetical protein 1953003..1953356 Acidovorax ebreus TPSY 7382600 YP_002553291.1 CDS Dtpsy_1834 NC_011992.1 1953401 1953982 D PFAM: bifunctional deaminase-reductase domain protein; KEGG: ajs:Ajs_2025 deaminase-reductase domain-containing protein; bifunctional deaminase-reductase domain protein 1953401..1953982 Acidovorax ebreus TPSY 7382601 YP_002553292.1 CDS Dtpsy_1835 NC_011992.1 1954066 1955409 R TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: ajs:Ajs_2026 TolC family type I secretion outer membrane protein; type I secretion outer membrane protein, TolC family complement(1954066..1955409) Acidovorax ebreus TPSY 7382602 YP_002553293.1 CDS Dtpsy_1836 NC_011992.1 1955480 1955818 R SMART: Rhodanese domain protein; KEGG: ajs:Ajs_2027 rhodanese domain-containing protein; Rhodanese domain protein complement(1955480..1955818) Acidovorax ebreus TPSY 7382603 YP_002553294.1 CDS Dtpsy_1837 NC_011992.1 1955850 1956560 R PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: ajs:Ajs_2028 methyltransferase type 11; Protein-L-isoaspartate(D-aspartate) O-methyltransferase complement(1955850..1956560) Acidovorax ebreus TPSY 7382604 YP_002553295.1 CDS Dtpsy_1838 NC_011992.1 1956608 1957273 R PFAM: regulatory protein TetR; KEGG: ajs:Ajs_2029 TetR family transcriptional regulator; transcriptional regulator, TetR family complement(1956608..1957273) Acidovorax ebreus TPSY 7382605 YP_002553296.1 CDS Dtpsy_1839 NC_011992.1 1957404 1957949 D TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; KEGG: ajs:Ajs_2030 peptide methionine sulfoxide reductase; peptide methionine sulfoxide reductase 1957404..1957949 Acidovorax ebreus TPSY 7382606 YP_002553297.1 CDS Dtpsy_1840 NC_011992.1 1958103 1958342 D KEGG: ajs:Ajs_2031 hypothetical protein; hypothetical protein 1958103..1958342 Acidovorax ebreus TPSY 7382607 YP_002553298.1 CDS Dtpsy_1841 NC_011992.1 1958368 1958772 D KEGG: ajs:Ajs_2032 hypothetical protein; hypothetical protein 1958368..1958772 Acidovorax ebreus TPSY 7382608 YP_002553299.1 CDS Dtpsy_1842 NC_011992.1 1958947 1961028 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ajs:Ajs_2033 TonB-dependent receptor; TonB-dependent receptor 1958947..1961028 Acidovorax ebreus TPSY 7382609 YP_002553300.1 CDS Dtpsy_1843 NC_011992.1 1961442 1962314 D KEGG: ajs:Ajs_2034 hypothetical protein; hypothetical protein 1961442..1962314 Acidovorax ebreus TPSY 7382204 YP_002553301.1 CDS Dtpsy_1844 NC_011992.1 1962452 1963675 D TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: ajs:Ajs_2035 chromate transporter; chromate transporter, chromate ion transporter (CHR) family 1962452..1963675 Acidovorax ebreus TPSY 7382205 YP_002553302.1 CDS Dtpsy_1845 NC_011992.1 1963740 1964186 R PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: ajs:Ajs_2036 AsnC family transcriptional regulator; transcriptional regulator, AsnC family complement(1963740..1964186) Acidovorax ebreus TPSY 7382206 YP_002553303.1 CDS Dtpsy_1846 NC_011992.1 1964330 1965499 D PFAM: TrkA-N domain protein; Saccharopine dehydrogenase; KEGG: ajs:Ajs_2037 saccharopine dehydrogenase; Saccharopine dehydrogenase 1964330..1965499 Acidovorax ebreus TPSY 7382207 YP_002553304.1 CDS Dtpsy_1847 NC_011992.1 1965500 1967329 R PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_2038 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(1965500..1967329) Acidovorax ebreus TPSY 7382208 YP_002553305.1 CDS Dtpsy_1848 NC_011992.1 1967498 1968133 R PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH; KEGG: ajs:Ajs_2039 GntR family transcriptional regulator; transcriptional regulator, GntR family complement(1967498..1968133) Acidovorax ebreus TPSY 7382209 YP_002553306.1 CDS Dtpsy_1849 NC_011992.1 1968258 1970420 D MDM; functions in conversion of succinate to propionate; methylmalonyl-CoA mutase 1968258..1970420 Acidovorax ebreus TPSY 7382210 YP_002553307.1 CDS Dtpsy_1850 NC_011992.1 1970417 1971445 D functions in transport of arginine/ornithine; inner membrane ATPase that cleaves ATP and phosphorylates two periplasmic proteins that function as two distinct transport systems, the AO (arginine and ornithine) and LAO (lysine, arginine, and ornithine) periplasmic binding proteins; arginine/ornithine transport system ATPase 1970417..1971445 Acidovorax ebreus TPSY 7382211 YP_002553308.1 CDS Dtpsy_1851 NC_011992.1 1971471 1973003 D PFAM: carboxyl transferase; KEGG: ajs:Ajs_2042 carboxyl transferase; carboxyl transferase 1971471..1973003 Acidovorax ebreus TPSY 7382212 YP_002553309.1 CDS Dtpsy_1852 NC_011992.1 1973020 1973460 D PFAM: protein of unknown function DUF1200; KEGG: mms:mma_3107 hypothetical protein; protein of unknown function DUF1200 1973020..1973460 Acidovorax ebreus TPSY 7382213 YP_002553310.1 CDS Dtpsy_1853 NC_011992.1 1973483 1975531 D PFAM: biotin/lipoyl attachment domain-containing protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: ajs:Ajs_2043 carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthase L chain ATP-binding 1973483..1975531 Acidovorax ebreus TPSY 7382214 YP_002553311.1 CDS Dtpsy_1854 NC_011992.1 1975591 1976052 D KEGG: ajs:Ajs_2044 lactoylglutathione lyase; lactoylglutathione lyase 1975591..1976052 Acidovorax ebreus TPSY 7382215 YP_002553312.1 CDS Dtpsy_1855 NC_011992.1 1976418 1977470 D KEGG: ajs:Ajs_2045 biotin synthase; TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB; biotin synthase 1976418..1977470 Acidovorax ebreus TPSY 7382216 YP_002553313.1 CDS Dtpsy_1856 NC_011992.1 1977888 1978313 R KEGG: reu:Reut_A1911 putative transcription regulator protein; hypothetical protein complement(1977888..1978313) Acidovorax ebreus TPSY 7382217 YP_002553314.1 CDS Dtpsy_1857 NC_011992.1 1978488 1980002 R KEGG: pst:PSPTO_0030 hypothetical protein; hypothetical protein complement(1978488..1980002) Acidovorax ebreus TPSY 7382218 YP_002553315.1 CDS Dtpsy_1858 NC_011992.1 1979999 1980727 R hypothetical protein complement(1979999..1980727) Acidovorax ebreus TPSY 7382219 YP_002553316.1 CDS Dtpsy_1859 NC_011992.1 1980981 1982288 R KEGG: reh:PHG407 putative TniA-like transposition protein; hypothetical protein complement(1980981..1982288) Acidovorax ebreus TPSY 7382220 YP_002553317.1 CDS Dtpsy_1860 NC_011992.1 1982285 1982758 R hypothetical protein complement(1982285..1982758) Acidovorax ebreus TPSY 7382221 YP_002553318.1 CDS Dtpsy_1861 NC_011992.1 1982998 1983717 D KEGG: pen:PSEEN3305 hypothetical protein; hypothetical protein 1982998..1983717 Acidovorax ebreus TPSY 7382222 YP_002553319.1 CDS Dtpsy_1862 NC_011992.1 1983851 1985146 D KEGG: psb:Psyr_3724 hypothetical protein; hypothetical protein 1983851..1985146 Acidovorax ebreus TPSY 7382223 YP_002553320.1 CDS Dtpsy_1863 NC_011992.1 1985201 1987768 D KEGG: pna:Pnap_4782 type I site-specific deoxyribonuclease, HsdR family; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: type III restriction protein res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases; type I site-specific deoxyribonuclease, HsdR family 1985201..1987768 Acidovorax ebreus TPSY 7382224 YP_002553321.1 CDS Dtpsy_1864 NC_011992.1 1988206 1988415 D KEGG: xac:XAC2130 hypothetical protein; hypothetical protein 1988206..1988415 Acidovorax ebreus TPSY 7382225 YP_002553322.1 CDS Dtpsy_1865 NC_011992.1 1988415 1989332 D KEGG: stp:Strop_1435 hypothetical protein; hypothetical protein 1988415..1989332 Acidovorax ebreus TPSY 7382226 YP_002553323.1 CDS Dtpsy_1866 NC_011992.1 1989485 1989823 D hypothetical protein 1989485..1989823 Acidovorax ebreus TPSY 7382227 YP_002553324.1 CDS Dtpsy_1867 NC_011992.1 1989820 1990113 D hypothetical protein 1989820..1990113 Acidovorax ebreus TPSY 7382228 YP_002553325.1 CDS Dtpsy_1868 NC_011992.1 1990264 1991004 D KEGG: xac:XAC2130 hypothetical protein; hypothetical protein 1990264..1991004 Acidovorax ebreus TPSY 7382229 YP_002553326.1 CDS Dtpsy_1869 NC_011992.1 1991148 1991939 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ajs:Ajs_2046 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1991148..1991939 Acidovorax ebreus TPSY 7382230 YP_002553327.1 CDS Dtpsy_1870 NC_011992.1 1992002 1992418 D KEGG: ajs:Ajs_2047 lactoylglutathione lyase; TIGRFAM: lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; lactoylglutathione lyase 1992002..1992418 Acidovorax ebreus TPSY 7382231 YP_002553328.1 CDS Dtpsy_1871 NC_011992.1 1992488 1993135 R KEGG: ajs:Ajs_2048 2-keto-3-deoxy-phosphogluconate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase complement(1992488..1993135) Acidovorax ebreus TPSY 7382232 YP_002553329.1 CDS Dtpsy_1872 NC_011992.1 1993126 1994943 R catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase complement(1993126..1994943) Acidovorax ebreus TPSY 7382233 YP_002553330.1 CDS Dtpsy_1873 NC_011992.1 1995100 1996110 R TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: ajs:Ajs_2050 TRAP dicarboxylate transporter, DctP subunit; TRAP dicarboxylate transporter, DctP subunit complement(1995100..1996110) Acidovorax ebreus TPSY 7382234 YP_002553331.1 CDS Dtpsy_1874 NC_011992.1 1996155 1997435 R TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: ajs:Ajs_2051 TRAP dicarboxylate transporter, DctM subunit; TRAP dicarboxylate transporter, DctM subunit complement(1996155..1997435) Acidovorax ebreus TPSY 7382235 YP_002553332.1 CDS Dtpsy_1875 NC_011992.1 1997444 1997965 R PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: ajs:Ajs_2052 tripartite ATP-independent periplasmic transporter DctQ; Tripartite ATP-independent periplasmic transporter DctQ component complement(1997444..1997965) Acidovorax ebreus TPSY 7382236 YP_002553333.1 CDS Dtpsy_1876 NC_011992.1 1997962 1998510 R TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase; KEGG: ajs:Ajs_2053 carbohydrate kinase; carbohydrate kinase, thermoresistant glucokinase family complement(1997962..1998510) Acidovorax ebreus TPSY 7382237 YP_002553334.1 CDS Dtpsy_1877 NC_011992.1 1998726 1999751 D PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: ajs:Ajs_2054 LacI family transcription regulator; transcriptional regulator, LacI family 1998726..1999751 Acidovorax ebreus TPSY 7382238 YP_002553335.1 CDS Dtpsy_1878 NC_011992.1 1999940 2000479 R PFAM: OmpA/MotB domain protein; KEGG: ajs:Ajs_2055 OmpA/MotB domain-containing protein; OmpA/MotB domain protein complement(1999940..2000479) Acidovorax ebreus TPSY 7382239 YP_002553336.1 CDS Dtpsy_1879 NC_011992.1 2000542 2001135 D PFAM: ChaC family protein; KEGG: ajs:Ajs_2056 ChaC family protein; ChaC family protein 2000542..2001135 Acidovorax ebreus TPSY 7382240 YP_002553337.1 CDS Dtpsy_1880 NC_011992.1 2001169 2001696 D PFAM: superoxide dismutase copper/zinc binding; KEGG: ajs:Ajs_2057 superoxide dismutase, copper/zinc binding; superoxide dismutase copper/zinc binding 2001169..2001696 Acidovorax ebreus TPSY 7382241 YP_002553338.1 CDS Dtpsy_1881 NC_011992.1 2001735 2002388 D KEGG: ajs:Ajs_2058 pyridoxamine 5'-phosphate oxidase; TIGRFAM: pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; pyridoxamine 5'-phosphate oxidase 2001735..2002388 Acidovorax ebreus TPSY 7382242 YP_002553339.1 CDS Dtpsy_1882 NC_011992.1 2002433 2003461 R PFAM: Auxin Efflux Carrier; KEGG: ajs:Ajs_2059 auxin efflux carrier; Auxin Efflux Carrier complement(2002433..2003461) Acidovorax ebreus TPSY 7382243 YP_002553340.1 CDS Dtpsy_1883 NC_011992.1 2003621 2004676 D TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase DuS; KEGG: ajs:Ajs_2060 tRNA-dihydrouridine synthase A; tRNA-dihydrouridine synthase A 2003621..2004676 Acidovorax ebreus TPSY 7382244 YP_002553341.1 CDS Dtpsy_1884 NC_011992.1 2004666 2007368 R KEGG: ajs:Ajs_2061 diguanylate cyclase/phosphodiesterase with PAS/PAC and CHASE sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; GGDEF domain containing protein; EAL domain protein; diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) complement(2004666..2007368) Acidovorax ebreus TPSY 7382245 YP_002553342.1 CDS Dtpsy_1885 NC_011992.1 2007538 2008608 D PFAM: RelA/SpoT domain protein; KEGG: ajs:Ajs_2062 RelA/SpoT domain-containing protein; RelA/SpoT domain protein 2007538..2008608 Acidovorax ebreus TPSY 7382246 YP_002553343.1 CDS Dtpsy_1886 NC_011992.1 2008778 2010085 D TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: ajs:Ajs_2063 polyhydroxyalkanoate depolymerase, intracellular; polyhydroxyalkanoate depolymerase, intracellular 2008778..2010085 Acidovorax ebreus TPSY 7382247 YP_002553344.1 CDS Dtpsy_1887 NC_011992.1 2010094 2010732 D TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Fe-S cluster domain protein; KEGG: ajs:Ajs_2064 electron transport complex, RnfABCDGE type, B subunit; electron transport complex, RnfABCDGE type, B subunit 2010094..2010732 Acidovorax ebreus TPSY 7382248 YP_002553345.1 CDS Dtpsy_1888 NC_011992.1 2010815 2012278 R PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; SMART: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: ajs:Ajs_2065 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(2010815..2012278) Acidovorax ebreus TPSY 7382249 YP_002553346.1 CDS Dtpsy_1889 NC_011992.1 2012499 2013713 D catalyzes the formation of succinyldiaminopimelate from N-succinyl-2-amino-6-ketopimelate; succinyldiaminopimelate transaminase 2012499..2013713 Acidovorax ebreus TPSY 7382250 YP_002553347.1 CDS dapD NC_011992.1 2013710 2014534 D catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 2013710..2014534 Acidovorax ebreus TPSY 7382251 YP_002553348.1 CDS Dtpsy_1891 NC_011992.1 2014591 2015754 D TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: ajs:Ajs_2068 twitching motility protein; twitching motility protein 2014591..2015754 Acidovorax ebreus TPSY 7382252 YP_002553349.1 CDS Dtpsy_1892 NC_011992.1 2015798 2016973 D dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 2015798..2016973 Acidovorax ebreus TPSY 7382253 YP_002553350.1 CDS Dtpsy_1893 NC_011992.1 2016970 2017899 D involved in methylation of ribosomal protein L3; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 2016970..2017899 Acidovorax ebreus TPSY 7382254 YP_002553351.1 CDS Dtpsy_1894 NC_011992.1 2017945 2019915 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_2071 ABC transporter related; ABC transporter related 2017945..2019915 Acidovorax ebreus TPSY 7382255 YP_002553352.1 CDS fabG NC_011992.1 2020366 2021103 R catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-(acyl-carrier-protein) reductase complement(2020366..2021103) Acidovorax ebreus TPSY 7382256 YP_002553353.1 CDS Dtpsy_1896 NC_011992.1 2021329 2023677 R KEGG: ajs:Ajs_1832 ATP-dependent Clp protease, ATP-binding subunit ClpA; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; ATP-dependent Clp protease ATP-binding subunit clpA; SMART: AAA ATPase; ATP-dependent Clp protease, ATP-binding subunit clpA complement(2021329..2023677) Acidovorax ebreus TPSY 7382257 YP_002553354.1 CDS Dtpsy_1897 NC_011992.1 2023737 2024105 R PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: ajs:Ajs_1831 ATP-dependent Clp protease adaptor protein ClpS; ATP-dependent Clp protease adaptor protein ClpS complement(2023737..2024105) Acidovorax ebreus TPSY 7382258 YP_002553355.1 CDS Dtpsy_1898 NC_011992.1 2024183 2027722 R KEGG: ajs:Ajs_1830 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein; DNA polymerase III, alpha subunit complement(2024183..2027722) Acidovorax ebreus TPSY 7382259 YP_002553356.1 CDS Dtpsy_1899 NC_011992.1 2027857 2028654 D TIGRFAM: outer membrane assembly lipoprotein YfiO; KEGG: ajs:Ajs_1829 putative transmembrane protein; outer membrane assembly lipoprotein YfiO 2027857..2028654 Acidovorax ebreus TPSY 7382260 YP_002553357.1 CDS Dtpsy_1900 NC_011992.1 2028617 2030683 R SMART: helicase c2; DEAD-like helicases; KEGG: ajs:Ajs_1828 helicase C2; helicase c2 complement(2028617..2030683) Acidovorax ebreus TPSY 7382261 YP_002553358.1 CDS Dtpsy_1901 NC_011992.1 2030855 2031658 D SMART: protein phosphatase 2C domain protein; KEGG: ajs:Ajs_1827 protein phosphatase 2C domain-containing protein; protein serine/threonine phosphatase 2030855..2031658 Acidovorax ebreus TPSY 7382262 YP_002553359.1 CDS Dtpsy_1902 NC_011992.1 2031718 2032404 R KEGG: ajs:Ajs_1826 hypothetical protein; hypothetical protein complement(2031718..2032404) Acidovorax ebreus TPSY 7382263 YP_002553360.1 CDS Dtpsy_1903 NC_011992.1 2032404 2033507 R PFAM: AFG1-family ATPase; KEGG: ajs:Ajs_1825 AFG1 family ATPase; AFG1-family ATPase complement(2032404..2033507) Acidovorax ebreus TPSY 7382264 YP_002553361.1 CDS Dtpsy_1904 NC_011992.1 2033585 2035012 R E3 component of 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase complement(2033585..2035012) Acidovorax ebreus TPSY 7382265 YP_002553362.1 CDS Dtpsy_1905 NC_011992.1 2035102 2036367 R TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: ajs:Ajs_1823 2-oxoglutarate dehydrogenase E2 component; 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase complement(2035102..2036367) Acidovorax ebreus TPSY 7382266 YP_002553363.1 CDS sucA NC_011992.1 2036417 2039293 R SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component complement(2036417..2039293) Acidovorax ebreus TPSY 7382267 YP_002553364.1 CDS Dtpsy_1907 NC_011992.1 2039510 2040568 D PFAM: protein of unknown function UPF0118; KEGG: ajs:Ajs_1821 hypothetical protein; protein of unknown function UPF0118 2039510..2040568 Acidovorax ebreus TPSY 7382268 YP_002553365.1 CDS Dtpsy_1908 NC_011992.1 2040637 2041623 R PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_1820 hypothetical protein; hypothetical protein complement(2040637..2041623) Acidovorax ebreus TPSY 7382269 YP_002553366.1 CDS Dtpsy_1909 NC_011992.1 2041668 2042030 R KEGG: ajs:Ajs_1819 hypothetical protein; hypothetical protein complement(2041668..2042030) Acidovorax ebreus TPSY 7382270 YP_002553367.1 CDS Dtpsy_1910 NC_011992.1 2042040 2043392 R PFAM: protein of unknown function DUF1446; KEGG: ajs:Ajs_1818 hypothetical protein; protein of unknown function DUF1446 complement(2042040..2043392) Acidovorax ebreus TPSY 7382271 YP_002553368.1 CDS Dtpsy_1911 NC_011992.1 2043489 2044421 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_1817 LysR family transcriptional regulator; transcriptional regulator, LysR family 2043489..2044421 Acidovorax ebreus TPSY 7382272 YP_002553369.1 CDS Dtpsy_1912 NC_011992.1 2044570 2045436 D PFAM: UspA domain protein; KEGG: ajs:Ajs_1816 UspA domain-containing protein; UspA domain protein 2044570..2045436 Acidovorax ebreus TPSY 7382273 YP_002553370.1 CDS Dtpsy_1913 NC_011992.1 2045554 2046381 R PFAM: Xylose isomerase domain protein TIM barrel; KEGG: ajs:Ajs_1815 hydroxypyruvate isomerase; Hydroxypyruvate isomerase complement(2045554..2046381) Acidovorax ebreus TPSY 7382274 YP_002553371.1 CDS Dtpsy_1914 NC_011992.1 2046459 2047625 R KEGG: ajs:Ajs_1814 putative lipoprotein; putative lipoprotein complement(2046459..2047625) Acidovorax ebreus TPSY 7382275 YP_002553372.1 CDS Dtpsy_1915 NC_011992.1 2047956 2049593 R PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: ajs:Ajs_1813 ABC transporter related; ABC transporter related complement(2047956..2049593) Acidovorax ebreus TPSY 7382276 YP_002553373.1 CDS Dtpsy_1916 NC_011992.1 2049615 2050712 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_1812 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component complement(2049615..2050712) Acidovorax ebreus TPSY 7382277 YP_002553374.1 CDS Dtpsy_1917 NC_011992.1 2050716 2051753 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_1811 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component complement(2050716..2051753) Acidovorax ebreus TPSY 7382278 YP_002553375.1 CDS Dtpsy_1918 NC_011992.1 2051761 2053635 R PFAM: extracellular solute-binding protein family 5; KEGG: ajs:Ajs_1810 extracellular solute-binding protein; extracellular solute-binding protein family 5 complement(2051761..2053635) Acidovorax ebreus TPSY 7382279 YP_002553376.1 CDS Dtpsy_1919 NC_011992.1 2053725 2054525 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ajs:Ajs_1809 enoyl-[acyl-carrier-protein] reductase [NADH]; short-chain dehydrogenase/reductase SDR 2053725..2054525 Acidovorax ebreus TPSY 7382280 YP_002553377.1 CDS Dtpsy_1921 NC_011992.1 2055424 2056890 R PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: ajs:Ajs_1801 deoxyribodipyrimidine photo-lyase type I; Deoxyribodipyrimidine photo-lyase complement(2055424..2056890) Acidovorax ebreus TPSY 7382283 YP_002553378.1 CDS Dtpsy_1922 NC_011992.1 2056934 2057632 R PFAM: Glutathione S-transferase domain; KEGG: ajs:Ajs_1800 glutathione S-transferase domain-containing protein; Glutathione S-transferase domain protein complement(2056934..2057632) Acidovorax ebreus TPSY 7382284 YP_002553379.1 CDS Dtpsy_1923 NC_011992.1 2057834 2058853 R TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: ajs:Ajs_1799 sulfate ABC transporter, periplasmic sulfate-binding protein; sulfate ABC transporter, periplasmic sulfate-binding protein complement(2057834..2058853) Acidovorax ebreus TPSY 7385080 YP_002553380.1 CDS Dtpsy_1924 NC_011992.1 2058992 2059264 D PFAM: Fe(II) trafficking protein YggX; KEGG: ajs:Ajs_1798 hypothetical protein; hypothetical protein 2058992..2059264 Acidovorax ebreus TPSY 7382042 YP_002553381.1 CDS Dtpsy_1925 NC_011992.1 2059485 2060150 D PFAM: protein of unknown function UPF0126; KEGG: ajs:Ajs_1797 hypothetical protein; protein of unknown function UPF0126 2059485..2060150 Acidovorax ebreus TPSY 7382043 YP_002553382.1 CDS Dtpsy_1926 NC_011992.1 2060187 2062106 D TIGRFAM: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC; PFAM: FAD dependent oxidoreductase; protein of unknown function DUF752; KEGG: ajs:Ajs_1796 hypothetical protein; tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC 2060187..2062106 Acidovorax ebreus TPSY 7382044 YP_002553383.1 CDS Dtpsy_1927 NC_011992.1 2062260 2064047 D PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: ajs:Ajs_1795 nitrite/sulfite reductase hemoprotein beta subunit; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein 2062260..2064047 Acidovorax ebreus TPSY 7382045 YP_002553384.1 CDS Dtpsy_1928 NC_011992.1 2064073 2064468 D PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_1794 hypothetical protein; hypothetical protein 2064073..2064468 Acidovorax ebreus TPSY 7382046 YP_002553385.1 CDS Dtpsy_1929 NC_011992.1 2064465 2065106 D PFAM: phosphoadenosine phosphosulfate reductase; KEGG: ajs:Ajs_1793 phosphoadenylylsulfate reductase (thioredoxin); phosphoadenosine phosphosulfate reductase 2064465..2065106 Acidovorax ebreus TPSY 7382047 YP_002553386.1 CDS Dtpsy_1930 NC_011992.1 2065168 2066100 D with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 2065168..2066100 Acidovorax ebreus TPSY 7382048 YP_002553387.1 CDS Dtpsy_1931 NC_011992.1 2066100 2067488 D KEGG: ajs:Ajs_1791 sulfate adenylyltransferase subunit 1; TIGRFAM: sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor GTP-binding; sulfate adenylyltransferase, large subunit 2066100..2067488 Acidovorax ebreus TPSY 7382049 YP_002553388.1 CDS Dtpsy_1932 NC_011992.1 2067591 2067914 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ajs:Ajs_1790 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein 2067591..2067914 Acidovorax ebreus TPSY 7382050 YP_002553389.1 CDS Dtpsy_1933 NC_011992.1 2067939 2069003 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ajs:Ajs_1789 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase 2067939..2069003 Acidovorax ebreus TPSY 7382051 YP_002553390.1 CDS Dtpsy_1934 NC_011992.1 2069263 2069739 D PFAM: protein of unknown function DUF1058; SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: ajs:Ajs_1788 SH3 type 3 domain-containing protein; SH3 type 3 domain protein 2069263..2069739 Acidovorax ebreus TPSY 7382052 YP_002553391.1 CDS Dtpsy_1935 NC_011992.1 2069807 2070658 R TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: ajs:Ajs_1787 phosphomethylpyrimidine kinase; phosphomethylpyrimidine kinase complement(2069807..2070658) Acidovorax ebreus TPSY 7382053 YP_002553392.1 CDS Dtpsy_1936 NC_011992.1 2070951 2072075 D PFAM: FAD dependent oxidoreductase; KEGG: ajs:Ajs_1786 FAD dependent oxidoreductase; FAD dependent oxidoreductase 2070951..2072075 Acidovorax ebreus TPSY 7382054 YP_002553393.1 CDS Dtpsy_1937 NC_011992.1 2072072 2072269 D TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: ajs:Ajs_1785 thiamine biosynthesis protein ThiS; thiamine biosynthesis protein ThiS 2072072..2072269 Acidovorax ebreus TPSY 7382055 YP_002553394.1 CDS thiG NC_011992.1 2072283 2073095 D functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 2072283..2073095 Acidovorax ebreus TPSY 7382056 YP_002553395.1 CDS Dtpsy_1939 NC_011992.1 2073098 2074027 D KEGG: ajs:Ajs_1783 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase 2073098..2074027 Acidovorax ebreus TPSY 7382057 YP_002553396.1 CDS Dtpsy_1940 NC_011992.1 2074058 2076142 R KEGG: ajs:Ajs_1782 hypothetical protein; hypothetical protein complement(2074058..2076142) Acidovorax ebreus TPSY 7382058 YP_002553397.1 CDS Dtpsy_1941 NC_011992.1 2076168 2077688 D converts 3-hydroxyadipyl-CoA to beta-ketoadipyl-CoA in phenylacetate degradation; 3-hydroxy-acyl-CoA dehydrogenase 2076168..2077688 Acidovorax ebreus TPSY 7382059 YP_002553398.1 CDS Dtpsy_1942 NC_011992.1 2077711 2078478 D PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ajs:Ajs_1780 enoyl-CoA hydratase/isomerase; Enoyl-CoA hydratase/isomerase 2077711..2078478 Acidovorax ebreus TPSY 7382060 YP_002553399.1 CDS Dtpsy_1943 NC_011992.1 2078681 2079400 D PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: ajs:Ajs_1779 Crp/FNR family transcriptional regulator; transcriptional regulator, Crp/Fnr family 2078681..2079400 Acidovorax ebreus TPSY 7382061 YP_002553400.1 CDS Dtpsy_1944 NC_011992.1 2079525 2080610 D PFAM: aminoglycoside phosphotransferase; KEGG: ajs:Ajs_1778 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 2079525..2080610 Acidovorax ebreus TPSY 7382062 YP_002553401.1 CDS Dtpsy_1945 NC_011992.1 2080642 2081916 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_1777 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase domain protein 2080642..2081916 Acidovorax ebreus TPSY 7382063 YP_002553402.1 CDS Dtpsy_1946 NC_011992.1 2082152 2082964 D PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: ajs:Ajs_1776 IclR family transcriptional regulator; transcriptional regulator, IclR family 2082152..2082964 Acidovorax ebreus TPSY 7382064 YP_002553403.1 CDS Dtpsy_1947 NC_011992.1 2083032 2084114 R PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: ajs:Ajs_1775 murein-dd-endopeptidase; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 complement(2083032..2084114) Acidovorax ebreus TPSY 7382065 YP_002553404.1 CDS Dtpsy_1948 NC_011992.1 2084229 2085767 R catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase complement(2084229..2085767) Acidovorax ebreus TPSY 7382066 YP_002553405.1 CDS Dtpsy_1949 NC_011992.1 2085803 2087476 R KEGG: ajs:Ajs_1773 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; 2-isopropylmalate synthase complement(2085803..2087476) Acidovorax ebreus TPSY 7382067 YP_002553406.1 CDS Dtpsy_1950 NC_011992.1 2087698 2088531 R KEGG: ajs:Ajs_1772 CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol/serine O-phosphatidyltransferase complement(2087698..2088531) Acidovorax ebreus TPSY 7382068 YP_002553407.1 CDS Dtpsy_1951 NC_011992.1 2088706 2089722 R catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase complement(2088706..2089722) Acidovorax ebreus TPSY 7382069 YP_002553408.1 CDS ilvH NC_011992.1 2089779 2090270 R with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit complement(2089779..2090270) Acidovorax ebreus TPSY 7382070 YP_002553409.1 CDS Dtpsy_1953 NC_011992.1 2090411 2092207 R acetolactate synthase large subunit; catalyzes the formation of 2-acetolactate from pyruvate; acetolactate synthase 3 catalytic subunit complement(2090411..2092207) Acidovorax ebreus TPSY 7382071 YP_002553410.1 CDS Dtpsy_1954 NC_011992.1 2092494 2093060 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 2092494..2093060 Acidovorax ebreus TPSY 7382072 YP_002553411.1 CDS Dtpsy_1955 NC_011992.1 2093057 2093518 D KEGG: ajs:Ajs_1767 putative transmembrane protein; putative transmembrane protein 2093057..2093518 Acidovorax ebreus TPSY 7382073 YP_002553412.1 CDS Dtpsy_1956 NC_011992.1 2093628 2094356 D KEGG: ajs:Ajs_1766 putative transmembrane protein; putative transmembrane protein 2093628..2094356 Acidovorax ebreus TPSY 7382074 YP_002553413.1 CDS Dtpsy_1957 NC_011992.1 2094483 2094947 D PFAM: RDD domain containing protein; KEGG: ajs:Ajs_1765 RDD domain-containing protein; RDD domain containing protein 2094483..2094947 Acidovorax ebreus TPSY 7382075 YP_002553414.1 CDS Dtpsy_1958 NC_011992.1 2095044 2095445 D PFAM: diacylglycerol kinase; KEGG: ajs:Ajs_1764 diacylglycerol kinase; diacylglycerol kinase 2095044..2095445 Acidovorax ebreus TPSY 7382076 YP_002553415.1 CDS Dtpsy_1959 NC_011992.1 2095438 2096031 D PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_1763 hypothetical protein; hypothetical protein 2095438..2096031 Acidovorax ebreus TPSY 7382077 YP_002553416.1 CDS Dtpsy_1960 NC_011992.1 2096082 2096420 R PFAM: nitrogen regulatory protein P-II; KEGG: ajs:Ajs_1762 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II complement(2096082..2096420) Acidovorax ebreus TPSY 7382078 YP_002553417.1 CDS Dtpsy_1961 NC_011992.1 2096489 2098153 R KEGG: ajs:Ajs_1761 NAD+ synthetase; TIGRFAM: NAD+ synthetase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; NAD synthase; NAD+ synthetase complement(2096489..2098153) Acidovorax ebreus TPSY 7382079 YP_002553418.1 CDS Dtpsy_1962 NC_011992.1 2098309 2099679 D PFAM: protein of unknown function DUF482; KEGG: ajs:Ajs_1760 hypothetical protein; protein of unknown function DUF482 2098309..2099679 Acidovorax ebreus TPSY 7382080 YP_002553419.1 CDS Dtpsy_1963 NC_011992.1 2099748 2100254 R PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: ajs:Ajs_1759 putative CheW protein; CheW protein complement(2099748..2100254) Acidovorax ebreus TPSY 7382081 YP_002553420.1 CDS Dtpsy_1964 NC_011992.1 2100470 2101000 R PFAM: Inorganic pyrophosphatase; KEGG: ajs:Ajs_1758 inorganic diphosphatase; Inorganic diphosphatase complement(2100470..2101000) Acidovorax ebreus TPSY 7382082 YP_002553421.1 CDS hppA NC_011992.1 2101239 2103323 D pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; membrane-bound proton-translocating pyrophosphatase 2101239..2103323 Acidovorax ebreus TPSY 7382083 YP_002553422.1 CDS Dtpsy_1966 NC_011992.1 2103431 2104864 D PFAM: Aldehyde Dehydrogenase; KEGG: ajs:Ajs_1756 aldehyde dehydrogenase; Aldehyde Dehydrogenase 2103431..2104864 Acidovorax ebreus TPSY 7382084 YP_002553423.1 CDS Dtpsy_1967 NC_011992.1 2104940 2105500 D KEGG: ajs:Ajs_1755 hypothetical protein; hypothetical protein 2104940..2105500 Acidovorax ebreus TPSY 7382085 YP_002553424.1 CDS Dtpsy_1968 NC_011992.1 2105892 2106734 R KEGG: ajs:Ajs_1750 hypothetical protein; hypothetical protein complement(2105892..2106734) Acidovorax ebreus TPSY 7382086 YP_002553425.1 CDS moaA NC_011992.1 2106881 2108017 D together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 2106881..2108017 Acidovorax ebreus TPSY 7382087 YP_002553426.1 CDS mobA NC_011992.1 2108078 2108713 D in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis; molybdopterin-guanine dinucleotide biosynthesis protein MobA 2108078..2108713 Acidovorax ebreus TPSY 7382088 YP_002553427.1 CDS Dtpsy_1971 NC_011992.1 2108740 2110098 D TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: ajs:Ajs_1747 molybdopterin molybdochelatase; molybdenum cofactor synthesis domain protein 2108740..2110098 Acidovorax ebreus TPSY 7382089 YP_002553428.1 CDS Dtpsy_1972 NC_011992.1 2110181 2110516 D PFAM: Thioredoxin domain; KEGG: ajs:Ajs_1746 thioredoxin domain-containing protein; Thioredoxin domain protein 2110181..2110516 Acidovorax ebreus TPSY 7382090 YP_002553429.1 CDS rnhA NC_011992.1 2110543 2110989 R An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H complement(2110543..2110989) Acidovorax ebreus TPSY 7382091 YP_002553430.1 CDS Dtpsy_1974 NC_011992.1 2111028 2111786 R PFAM: Methyltransferase type 11; KEGG: ajs:Ajs_1744 methyltransferase type 11; Methyltransferase type 11 complement(2111028..2111786) Acidovorax ebreus TPSY 7382092 YP_002553431.1 CDS Dtpsy_1975 NC_011992.1 2111806 2112585 D KEGG: ajs:Ajs_1743 hydroxyacylglutathione hydrolase; TIGRFAM: hydroxyacylglutathione hydrolase; PFAM: beta-lactamase domain protein; hydroxyacylglutathione hydrolase 2111806..2112585 Acidovorax ebreus TPSY 7382093 YP_002553432.1 CDS Dtpsy_1976 NC_011992.1 2112582 2114096 D PFAM: Lytic transglycosylase catalytic; MLTD_N domain protein; KEGG: ajs:Ajs_1742 lytic transglycosylase, catalytic; Lytic transglycosylase catalytic 2112582..2114096 Acidovorax ebreus TPSY 7382094 YP_002553433.1 CDS Dtpsy_1977 NC_011992.1 2114103 2114255 R KEGG: ajs:Ajs_1741 hypothetical protein; hypothetical protein complement(2114103..2114255) Acidovorax ebreus TPSY 7382095 YP_002553434.1 CDS Dtpsy_1978 NC_011992.1 2114497 2114643 R KEGG: bte:BTH_I0079 putative lipoprotein; putative lipoprotein complement(2114497..2114643) Acidovorax ebreus TPSY 7382096 YP_002553435.1 CDS Dtpsy_1979 NC_011992.1 2115804 2116589 R KEGG: ajs:Ajs_1725 TPR repeat-containing protein; TIGRFAM: tol-pal system protein YbgF; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; tol-pal system protein YbgF complement(2115804..2116589) Acidovorax ebreus TPSY 7382098 YP_002553436.1 CDS Dtpsy_1980 NC_011992.1 2116589 2117131 R TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: ajs:Ajs_1724 TonB box domain-containing protein; peptidoglycan-associated lipoprotein complement(2116589..2117131) Acidovorax ebreus TPSY 7382099 YP_002553437.1 CDS tolB NC_011992.1 2117171 2118493 R forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB complement(2117171..2118493) Acidovorax ebreus TPSY 7382100 YP_002553438.1 CDS Dtpsy_1982 NC_011992.1 2118615 2120399 D KEGG: ajs:Ajs_1722 lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; TIGRFAM: lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA 2118615..2120399 Acidovorax ebreus TPSY 7382101 YP_002553439.1 CDS Dtpsy_1983 NC_011992.1 2120522 2121208 R PFAM: Ankyrin; SMART: Ankyrin; KEGG: ajs:Ajs_1721 ankyrin; Ankyrin complement(2120522..2121208) Acidovorax ebreus TPSY 7382102 YP_002553440.1 CDS Dtpsy_1984 NC_011992.1 2121205 2122014 R TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: ajs:Ajs_1720 TatD family hydrolase; hydrolase, TatD family complement(2121205..2122014) Acidovorax ebreus TPSY 7382103 YP_002553441.1 CDS Dtpsy_1985 NC_011992.1 2122088 2122447 R PFAM: type IV pilus assembly PilZ; KEGG: ajs:Ajs_1719 type IV pilus assembly PilZ; type IV pilus assembly PilZ complement(2122088..2122447) Acidovorax ebreus TPSY 7382104 YP_002553442.1 CDS Dtpsy_1986 NC_011992.1 2122464 2123462 R KEGG: ajs:Ajs_1718 DNA-directed DNA polymerase; DNA-directed DNA polymerase complement(2122464..2123462) Acidovorax ebreus TPSY 7382105 YP_002553443.1 CDS tmk NC_011992.1 2123459 2124112 R catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase complement(2123459..2124112) Acidovorax ebreus TPSY 7382106 YP_002553444.1 CDS Dtpsy_1988 NC_011992.1 2124109 2125146 R PFAM: aminodeoxychorismate lyase; KEGG: ajs:Ajs_1716 aminodeoxychorismate lyase; aminodeoxychorismate lyase complement(2124109..2125146) Acidovorax ebreus TPSY 7382107 YP_002553445.1 CDS Dtpsy_1989 NC_011992.1 2125156 2126091 D TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); KEGG: ajs:Ajs_1715 glycine cleavage T protein (aminomethyl transferase); folate-binding protein YgfZ 2125156..2126091 Acidovorax ebreus TPSY 7382108 YP_002553446.1 CDS Dtpsy_1990 NC_011992.1 2126151 2127014 R PFAM: GCN5-related N-acetyltransferase; thioesterase superfamily protein; KEGG: ajs:Ajs_1714 thioesterase superfamily protein; thioesterase superfamily protein complement(2126151..2127014) Acidovorax ebreus TPSY 7382109 YP_002553447.1 CDS Dtpsy_1991 NC_011992.1 2127036 2127998 R PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: ajs:Ajs_1713 alpha/beta hydrolase domain-containing protein; Alpha/beta hydrolase fold-3 domain protein complement(2127036..2127998) Acidovorax ebreus TPSY 7382110 YP_002553448.1 CDS Dtpsy_1992 NC_011992.1 2128042 2128917 R PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: ajs:Ajs_1712 hydratase/decarboxylase; fumarylacetoacetate (FAA) hydrolase complement(2128042..2128917) Acidovorax ebreus TPSY 7382111 YP_002553449.1 CDS Dtpsy_1993 NC_011992.1 2128980 2130116 D PFAM: iron-containing alcohol dehydrogenase; KEGG: ajs:Ajs_1711 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 2128980..2130116 Acidovorax ebreus TPSY 7382112 YP_002553450.1 CDS Dtpsy_1994 NC_011992.1 2130221 2131672 D PFAM: histidine kinase HAMP region domain protein; SMART: PAS domain containing protein; KEGG: ajs:Ajs_1710 putative PAS/PAC sensor protein; putative PAS/PAC sensor protein 2130221..2131672 Acidovorax ebreus TPSY 7382113 YP_002553451.1 CDS Dtpsy_1995 NC_011992.1 2131703 2132848 R KEGG: ajs:Ajs_1709 hypothetical protein; hypothetical protein complement(2131703..2132848) Acidovorax ebreus TPSY 7382114 YP_002553452.1 CDS Dtpsy_1996 NC_011992.1 2132877 2133701 R PFAM: Metal-dependent hydrolase HDOD; KEGG: ajs:Ajs_1708 putative signal transduction protein; putative signal transduction protein complement(2132877..2133701) Acidovorax ebreus TPSY 7382115 YP_002553453.1 CDS Dtpsy_1997 NC_011992.1 2133774 2136170 R PFAM: RNA binding S1 domain protein; Resolvase RNase H domain protein fold; SMART: RNA binding S1 domain protein; Resolvase RNase H domain protein fold; KEGG: ajs:Ajs_1707 RNA-binding S1 domain-containing protein; Resolvase RNase H domain protein complement(2133774..2136170) Acidovorax ebreus TPSY 7382116 YP_002553454.1 CDS Dtpsy_1998 NC_011992.1 2136247 2136651 D KEGG: ajs:Ajs_1705 hypothetical protein; hypothetical protein 2136247..2136651 Acidovorax ebreus TPSY 7382117 YP_002553455.1 CDS Dtpsy_1999 NC_011992.1 2136655 2137746 D PFAM: protein of unknown function DUF72; KEGG: ajs:Ajs_1704 hypothetical protein; protein of unknown function DUF72 2136655..2137746 Acidovorax ebreus TPSY 7382118 YP_002553456.1 CDS Dtpsy_2000 NC_011992.1 2137886 2139292 R PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_1703 major facilitator superfamily transporter; major facilitator superfamily MFS_1 complement(2137886..2139292) Acidovorax ebreus TPSY 7382119 YP_002553457.1 CDS Dtpsy_2001 NC_011992.1 2139289 2140527 R TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_1702 Bcr/CflA subfamily drug resistance transporter; drug resistance transporter, Bcr/CflA subfamily complement(2139289..2140527) Acidovorax ebreus TPSY 7382120 YP_002553458.1 CDS Dtpsy_2002 NC_011992.1 2140629 2141396 D PFAM: protein of unknown function DUF1566; KEGG: ajs:Ajs_1701 hypothetical protein; protein of unknown function DUF1566 2140629..2141396 Acidovorax ebreus TPSY 7382121 YP_002553459.1 CDS Dtpsy_2003 NC_011992.1 2141507 2142412 R probable dehydrogenase; hypothetical protein complement(2141507..2142412) Acidovorax ebreus TPSY 7382122 YP_002553460.1 CDS Dtpsy_2004 NC_011992.1 2142447 2143373 R KEGG: ajs:Ajs_1699 putative glutathione S-transferase-related protein; putative glutathione S-transferase-related protein complement(2142447..2143373) Acidovorax ebreus TPSY 7385326 YP_002553461.1 CDS Dtpsy_2005 NC_011992.1 2143422 2143886 R PFAM: GCN5-related N-acetyltransferase; KEGG: ajs:Ajs_1698 GCN5-related N-acetyltransferase; GCN5-related N-acetyltransferase complement(2143422..2143886) Acidovorax ebreus TPSY 7384997 YP_002553462.1 CDS Dtpsy_2006 NC_011992.1 2143883 2144899 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: ajs:Ajs_1697 alcohol dehydrogenase; Alcohol dehydrogenase zinc-binding domain protein complement(2143883..2144899) Acidovorax ebreus TPSY 7384998 YP_002553463.1 CDS Dtpsy_2007 NC_011992.1 2144987 2145394 R PFAM: thioesterase superfamily protein; KEGG: ajs:Ajs_1696 hypothetical protein; thioesterase superfamily protein complement(2144987..2145394) Acidovorax ebreus TPSY 7384999 YP_002553464.1 CDS Dtpsy_2008 NC_011992.1 2145467 2146258 R Involved in the nonphosphorylative, ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate; gluconate 5-dehydrogenase complement(2145467..2146258) Acidovorax ebreus TPSY 7385000 YP_002553465.1 CDS Dtpsy_2009 NC_011992.1 2146474 2146941 D PFAM: CMP/dCMP deaminase zinc-binding; KEGG: dac:Daci_2203 CMP/dCMP deaminase zinc-binding; CMP/dCMP deaminase zinc-binding 2146474..2146941 Acidovorax ebreus TPSY 7385001 YP_002553466.1 CDS Dtpsy_2010 NC_011992.1 2147505 2148638 D PFAM: Extracellular ligand-binding receptor; KEGG: ajs:Ajs_1693 extracellular ligand-binding receptor; Extracellular ligand-binding receptor 2147505..2148638 Acidovorax ebreus TPSY 7385002 YP_002553467.1 CDS Dtpsy_2011 NC_011992.1 2148740 2150098 D PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_1692 major facilitator superfamily transporter; major facilitator superfamily MFS_1 2148740..2150098 Acidovorax ebreus TPSY 7385003 YP_002553468.1 CDS Dtpsy_2012 NC_011992.1 2150224 2151114 D TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: ajs:Ajs_1691 phosphonate ABC transporter, periplasmic phosphonate-binding protein; phosphonate ABC transporter, periplasmic phosphonate-binding protein 2150224..2151114 Acidovorax ebreus TPSY 7385004 YP_002553469.1 CDS Dtpsy_2013 NC_011992.1 2151236 2152069 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_1690 ABC transporter related; ABC transporter related 2151236..2152069 Acidovorax ebreus TPSY 7385005 YP_002553470.1 CDS Dtpsy_2014 NC_011992.1 2152060 2153631 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_1689 phosphonate ABC transporter, inner membrane subunit; binding-protein-dependent transport systems inner membrane component 2152060..2153631 Acidovorax ebreus TPSY 7385006 YP_002553471.1 CDS Dtpsy_2015 NC_011992.1 2153877 2154965 D PFAM: transposase IS4 family protein; KEGG: ajs:Ajs_3918 transposase, IS4 family protein; transposase IS4 family protein 2153877..2154965 Acidovorax ebreus TPSY 7385007 YP_002553472.1 CDS Dtpsy_2016 NC_011992.1 2155116 2155616 R KEGG: ajs:Ajs_1688 NAD(P)H dehydrogenase (quinone); NAD(P)H dehydrogenase (quinone) complement(2155116..2155616) Acidovorax ebreus TPSY 7385008 YP_002553473.1 CDS Dtpsy_2017 NC_011992.1 2155677 2157536 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: ajs:Ajs_1687 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase domain protein complement(2155677..2157536) Acidovorax ebreus TPSY 7385009 YP_002553474.1 CDS Dtpsy_2018 NC_011992.1 2157675 2158835 R KEGG: ajs:Ajs_1686 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(2157675..2158835) Acidovorax ebreus TPSY 7385010 YP_002553475.1 CDS Dtpsy_2019 NC_011992.1 2159201 2160376 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase complement(2159201..2160376) Acidovorax ebreus TPSY 7385011 YP_002553476.1 CDS Dtpsy_2020 NC_011992.1 2160422 2162521 R PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: ajs:Ajs_1684 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxyacyl-CoA dehydrogenase NAD-binding complement(2160422..2162521) Acidovorax ebreus TPSY 7385012 YP_002553477.1 CDS Dtpsy_2021 NC_011992.1 2162714 2163409 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_1683 ABC transporter related; ABC transporter related complement(2162714..2163409) Acidovorax ebreus TPSY 7385013 YP_002553478.1 CDS Dtpsy_2022 NC_011992.1 2163413 2164195 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_1682 ABC transporter related; ABC transporter related complement(2163413..2164195) Acidovorax ebreus TPSY 7385014 YP_002553479.1 CDS Dtpsy_2023 NC_011992.1 2164195 2165532 R PFAM: inner-membrane translocator; KEGG: ajs:Ajs_1681 inner-membrane translocator; inner-membrane translocator complement(2164195..2165532) Acidovorax ebreus TPSY 7385015 YP_002553480.1 CDS Dtpsy_2024 NC_011992.1 2165539 2166492 R PFAM: inner-membrane translocator; KEGG: ajs:Ajs_1680 inner-membrane translocator; inner-membrane translocator complement(2165539..2166492) Acidovorax ebreus TPSY 7385016 YP_002553481.1 CDS Dtpsy_2025 NC_011992.1 2166568 2167803 R PFAM: Extracellular ligand-binding receptor; KEGG: ajs:Ajs_1679 extracellular ligand-binding receptor; Extracellular ligand-binding receptor complement(2166568..2167803) Acidovorax ebreus TPSY 7385017 YP_002553482.1 CDS Dtpsy_2026 NC_011992.1 2167943 2169580 R activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase complement(2167943..2169580) Acidovorax ebreus TPSY 7385018 YP_002553483.1 CDS Dtpsy_2027 NC_011992.1 2169753 2171240 D PFAM: protein of unknown function UPF0061; KEGG: ajs:Ajs_1677 hypothetical protein; protein of unknown function UPF0061 2169753..2171240 Acidovorax ebreus TPSY 7385019 YP_002553484.1 CDS Dtpsy_2028 NC_011992.1 2171237 2171650 D TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; KEGG: ajs:Ajs_1676 methionine-R-sulfoxide reductase; methionine-R-sulfoxide reductase 2171237..2171650 Acidovorax ebreus TPSY 7385020 YP_002553485.1 CDS Dtpsy_2029 NC_011992.1 2171647 2172207 D Involved in cell division; probably involved in intracellular septation; intracellular septation protein A 2171647..2172207 Acidovorax ebreus TPSY 7385021 YP_002553486.1 CDS Dtpsy_2030 NC_011992.1 2172204 2172482 D PFAM: BolA family protein; KEGG: ajs:Ajs_1674 transcriptional regulator BolA; BolA family protein 2172204..2172482 Acidovorax ebreus TPSY 7385022 YP_002553487.1 CDS Dtpsy_2031 NC_011992.1 2172550 2173335 D PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: ajs:Ajs_1673 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 2172550..2173335 Acidovorax ebreus TPSY 7385023 YP_002553488.1 CDS Dtpsy_2032 NC_011992.1 2173388 2174158 R PFAM: protein of unknown function DUF1624; KEGG: ajs:Ajs_1672 hypothetical protein; protein of unknown function DUF1624 complement(2173388..2174158) Acidovorax ebreus TPSY 7385024 YP_002553489.1 CDS Dtpsy_2033 NC_011992.1 2174306 2174608 R KEGG: ajs:Ajs_1671 hypothetical protein; hypothetical protein complement(2174306..2174608) Acidovorax ebreus TPSY 7385025 YP_002553490.1 CDS infA NC_011992.1 2174924 2175190 R stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 complement(2174924..2175190) Acidovorax ebreus TPSY 7385027 YP_002553491.1 CDS Dtpsy_2035 NC_011992.1 2175427 2176596 R PFAM: CBS domain containing protein; HPP family protein; SMART: CBS domain containing protein; KEGG: ajs:Ajs_1669 CBS domain-containing protein; CBS domain containing membrane protein complement(2175427..2176596) Acidovorax ebreus TPSY 7385028 YP_002553492.1 CDS psd NC_011992.1 2176807 2177658 D catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine; phosphatidylserine decarboxylase 2176807..2177658 Acidovorax ebreus TPSY 7385029 YP_002553493.1 CDS Dtpsy_2037 NC_011992.1 2177689 2177949 R KEGG: ajs:Ajs_1667 hypothetical protein; hypothetical protein complement(2177689..2177949) Acidovorax ebreus TPSY 7385030 YP_002553494.1 CDS Dtpsy_2038 NC_011992.1 2177967 2178791 R TIGRFAM: N-formylglutamate amidohydrolase; PFAM: N-formylglutamate amidohydrolase; KEGG: ajs:Ajs_1666 N-formylglutamate amidohydrolase; N-formylglutamate amidohydrolase complement(2177967..2178791) Acidovorax ebreus TPSY 7385031 YP_002553495.1 CDS Dtpsy_2039 NC_011992.1 2179001 2179369 D KEGG: ajs:Ajs_1665 hypothetical protein; hypothetical protein 2179001..2179369 Acidovorax ebreus TPSY 7385032 YP_002553496.1 CDS Dtpsy_2040 NC_011992.1 2179514 2180077 D TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: ajs:Ajs_1664 BadM/Rrf2 family transcriptional regulator; transcriptional regulator, BadM/Rrf2 family 2179514..2180077 Acidovorax ebreus TPSY 7385033 YP_002553497.1 CDS Dtpsy_2041 NC_011992.1 2180147 2182816 R KEGG: ajs:Ajs_1663 hypothetical protein; hypothetical protein complement(2180147..2182816) Acidovorax ebreus TPSY 7385034 YP_002553498.1 CDS Dtpsy_2042 NC_011992.1 2183042 2186749 R PFAM: protein of unknown function DUF748; KEGG: ajs:Ajs_1662 hypothetical protein; protein of unknown function DUF748 complement(2183042..2186749) Acidovorax ebreus TPSY 7385035 YP_002553499.1 CDS Dtpsy_2043 NC_011992.1 2187468 2188307 D PFAM: Lytic transglycosylase catalytic; KEGG: ajs:Ajs_1661 lytic transglycosylase, catalytic; Lytic transglycosylase catalytic 2187468..2188307 Acidovorax ebreus TPSY 7385036 YP_002553500.1 CDS glyA NC_011992.1 2188545 2189789 D catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 2188545..2189789 Acidovorax ebreus TPSY 7385037 YP_002553501.1 CDS nrdR NC_011992.1 2189802 2190251 D PFAM: ATP-cone domain protein; KEGG: ajs:Ajs_1659 transcriptional regulator NrdR; transcriptional regulator NrdR 2189802..2190251 Acidovorax ebreus TPSY 7385038 YP_002553502.1 CDS Dtpsy_2046 NC_011992.1 2190328 2191428 R catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase complement(2190328..2191428) Acidovorax ebreus TPSY 7385039 YP_002553503.1 CDS Dtpsy_2047 NC_011992.1 2191522 2191977 R PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: ajs:Ajs_1657 XRE family transcriptional regulator; CBS domain containing protein complement(2191522..2191977) Acidovorax ebreus TPSY 7385040 YP_002553504.1 CDS Dtpsy_2048 NC_011992.1 2192076 2193389 D catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; O-acetylhomoserine aminocarboxypropyltransferase 2192076..2193389 Acidovorax ebreus TPSY 7385041 YP_002553505.1 CDS Dtpsy_2049 NC_011992.1 2193389 2194210 D PFAM: alpha/beta hydrolase fold; KEGG: ajs:Ajs_1655 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 2193389..2194210 Acidovorax ebreus TPSY 7385042 YP_002553506.1 CDS Dtpsy_2050 NC_011992.1 2194557 2197295 D TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: ajs:Ajs_1654 ATPase, P-type (transporting), HAD superfamily, subfamily IC; ATPase, P-type (transporting), HAD superfamily, subfamily IC 2194557..2197295 Acidovorax ebreus TPSY 7385043 YP_002553507.1 CDS Dtpsy_2051 NC_011992.1 2197308 2198000 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ajs:Ajs_1653 HAD family hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 1 complement(2197308..2198000) Acidovorax ebreus TPSY 7385044 YP_002553508.1 CDS Dtpsy_2052 NC_011992.1 2198040 2199098 D KEGG: ajs:Ajs_1652 ferrochelatase; TIGRFAM: ferrochelatase; PFAM: ferrochelatase; ferrochelatase 2198040..2199098 Acidovorax ebreus TPSY 7385045 YP_002553509.1 CDS Dtpsy_2053 NC_011992.1 2199095 2201548 D KEGG: rfr:Rfer_3315 putative ATP-dependent protease La, putative; putative ATP-dependent protease La, putative 2199095..2201548 Acidovorax ebreus TPSY 7385046 YP_002553510.1 CDS Dtpsy_2054 NC_011992.1 2201685 2202638 D PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: ajs:Ajs_1650 rhodanese domain-containing protein; Rhodanese domain protein 2201685..2202638 Acidovorax ebreus TPSY 7385047 YP_002553511.1 CDS Dtpsy_2055 NC_011992.1 2202746 2203843 D PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: ajs:Ajs_1649 protein of unknown function DUF395, YeeE/YedE; protein of unknown function DUF395 YeeE/YedE 2202746..2203843 Acidovorax ebreus TPSY 7385048 YP_002553512.1 CDS Dtpsy_2056 NC_011992.1 2203863 2204030 D KEGG: ajs:Ajs_1648 hypothetical protein; hypothetical protein 2203863..2204030 Acidovorax ebreus TPSY 7385049 YP_002553513.1 CDS Dtpsy_2058 NC_011992.1 2205192 2206070 R PFAM: alpha/beta hydrolase fold; KEGG: ajs:Ajs_1646 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(2205192..2206070) Acidovorax ebreus TPSY 7385051 YP_002553514.1 CDS Dtpsy_2059 NC_011992.1 2206117 2207244 R PFAM: Extracellular ligand-binding receptor; KEGG: dar:Daro_4184 extracellular ligand-binding receptor; Extracellular ligand-binding receptor complement(2206117..2207244) Acidovorax ebreus TPSY 7385052 YP_002553515.1 CDS Dtpsy_2060 NC_011992.1 2207348 2209528 R KEGG: dac:Daci_2556 putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane; putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane complement(2207348..2209528) Acidovorax ebreus TPSY 7385053 YP_002553516.1 CDS Dtpsy_2061 NC_011992.1 2209580 2210647 R PFAM: inner-membrane translocator; KEGG: dac:Daci_2555 inner-membrane translocator; inner-membrane translocator complement(2209580..2210647) Acidovorax ebreus TPSY 7385054 YP_002553517.1 CDS Dtpsy_2062 NC_011992.1 2210659 2211720 R PFAM: inner-membrane translocator; KEGG: dac:Daci_2554 inner-membrane translocator; inner-membrane translocator complement(2210659..2211720) Acidovorax ebreus TPSY 7385055 YP_002553518.1 CDS Dtpsy_2063 NC_011992.1 2211717 2212442 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dac:Daci_2553 ABC transporter related; ABC transporter related complement(2211717..2212442) Acidovorax ebreus TPSY 7385056 YP_002553519.1 CDS Dtpsy_2064 NC_011992.1 2212439 2213221 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dac:Daci_2552 ABC transporter related; ABC transporter related complement(2212439..2213221) Acidovorax ebreus TPSY 7385057 YP_002553520.1 CDS Dtpsy_2065 NC_011992.1 2213261 2214781 R KEGG: pna:Pnap_1238 fibronectin, type III domain protein; PFAM: Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; Poly(3-hydroxybutyrate) depolymerase complement(2213261..2214781) Acidovorax ebreus TPSY 7385058 YP_002553521.1 CDS Dtpsy_2066 NC_011992.1 2214913 2216112 R PFAM: Extracellular ligand-binding receptor; KEGG: dac:Daci_2551 extracellular ligand-binding receptor; Extracellular ligand-binding receptor complement(2214913..2216112) Acidovorax ebreus TPSY 7385059 YP_002553522.1 CDS Dtpsy_2067 NC_011992.1 2216303 2217817 R PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: PAS domain containing protein; AAA ATPase; KEGG: dac:Daci_2530 putative sigma54 specific transcriptional regulator; PAS modulated sigma54 specific transcriptional regulator, Fis family complement(2216303..2217817) Acidovorax ebreus TPSY 7385060 YP_002553523.1 CDS Dtpsy_2068 NC_011992.1 2218382 2220571 D TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: aav:Aave_3007 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 2218382..2220571 Acidovorax ebreus TPSY 7385061 YP_002553524.1 CDS Dtpsy_2069 NC_011992.1 2220595 2221788 D PFAM: PepSY-associated TM helix domain protein; KEGG: mpt:Mpe_A1737 hypothetical protein; PepSY-associated TM helix domain protein 2220595..2221788 Acidovorax ebreus TPSY 7385062 YP_002553525.1 CDS Dtpsy_2070 NC_011992.1 2221835 2223364 R PFAM: protein of unknown function DUF112 transmembrane; KEGG: ajs:Ajs_1644 hypothetical protein; protein of unknown function DUF112 transmembrane complement(2221835..2223364) Acidovorax ebreus TPSY 7385063 YP_002553526.1 CDS Dtpsy_2071 NC_011992.1 2223455 2224006 R KEGG: ajs:Ajs_1643 hypothetical protein; hypothetical protein complement(2223455..2224006) Acidovorax ebreus TPSY 7385064 YP_002553527.1 CDS Dtpsy_2072 NC_011992.1 2224140 2225099 R PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_1642 hypothetical protein; hypothetical protein complement(2224140..2225099) Acidovorax ebreus TPSY 7385065 YP_002553528.1 CDS Dtpsy_2073 NC_011992.1 2225247 2225933 D PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: ajs:Ajs_1641 two component transcriptional regulator; two component transcriptional regulator, winged helix family 2225247..2225933 Acidovorax ebreus TPSY 7385066 YP_002553529.1 CDS Dtpsy_2074 NC_011992.1 2226112 2227515 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ajs:Ajs_1640 integral membrane sensor signal transduction histidine kinase; histidine kinase 2226112..2227515 Acidovorax ebreus TPSY 7385067 YP_002553530.1 CDS Dtpsy_2075 NC_011992.1 2227577 2227981 D PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: ajs:Ajs_1639 RNA-binding S4 domain-containing protein; RNA-binding S4 domain protein 2227577..2227981 Acidovorax ebreus TPSY 7385068 YP_002553531.1 CDS Dtpsy_2076 NC_011992.1 2228103 2228405 R KEGG: ajs:Ajs_1638 hypothetical protein; hypothetical protein complement(2228103..2228405) Acidovorax ebreus TPSY 7385069 YP_002553532.1 CDS Dtpsy_2077 NC_011992.1 2228542 2230014 R PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; SMART: helix-turn-helix domain protein; KEGG: ajs:Ajs_1637 XRE family transcriptional regulator; transcriptional regulator, XRE family complement(2228542..2230014) Acidovorax ebreus TPSY 7385070 YP_002553533.1 CDS Dtpsy_2078 NC_011992.1 2230116 2230532 D PFAM: thioesterase superfamily protein; KEGG: ajs:Ajs_1636 thioesterase superfamily protein; thioesterase superfamily protein 2230116..2230532 Acidovorax ebreus TPSY 7385071 YP_002553534.1 CDS Dtpsy_2079 NC_011992.1 2230529 2231689 D catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate; also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity; methylcitrate synthase 2230529..2231689 Acidovorax ebreus TPSY 7385072 YP_002553535.1 CDS acnA NC_011992.1 2231796 2234468 D catalyzes the conversion of citrate to isocitrate; aconitate hydratase 2231796..2234468 Acidovorax ebreus TPSY 7385073 YP_002553536.1 CDS Dtpsy_2081 NC_011992.1 2234482 2235684 D TIGRFAM: AcnD-accessory protein PrpF; PFAM: protein of unknown function DUF453; KEGG: ajs:Ajs_1633 methylitaconate delta2-delta3-isomerase; AcnD-accessory protein PrpF 2234482..2235684 Acidovorax ebreus TPSY 7385074 YP_002553537.1 CDS Dtpsy_2082 NC_011992.1 2235868 2236728 D KEGG: ajs:Ajs_1632 2,3-dimethylmalate lyase; 2,3-dimethylmalate lyase 2235868..2236728 Acidovorax ebreus TPSY 7385075 YP_002553538.1 CDS Dtpsy_2083 NC_011992.1 2236775 2237704 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_1631 LysR family transcriptional regulator; transcriptional regulator, LysR family complement(2236775..2237704) Acidovorax ebreus TPSY 7385076 YP_002553539.1 CDS Dtpsy_2084 NC_011992.1 2237802 2240171 D catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase 2237802..2240171 Acidovorax ebreus TPSY 7385077 YP_002553540.1 CDS Dtpsy_2085 NC_011992.1 2240227 2240706 D KEGG: ajs:Ajs_1629 hypothetical protein; hypothetical protein 2240227..2240706 Acidovorax ebreus TPSY 7382610 YP_002553541.1 CDS Dtpsy_2086 NC_011992.1 2240910 2242178 R catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase complement(2240910..2242178) Acidovorax ebreus TPSY 7383021 YP_002553542.1 CDS Dtpsy_2087 NC_011992.1 2242216 2243223 R TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; KEGG: ajs:Ajs_1627 tRNA(Ile)-lysidine synthetase; tRNA(Ile)-lysidine synthetase complement(2242216..2243223) Acidovorax ebreus TPSY 7383022 YP_002553543.1 CDS Dtpsy_2088 NC_011992.1 2243313 2245166 R PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; SMART: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bpy:Bphyt_2718 methyl-accepting chemotaxis sensory transducer with cache sensor; methyl-accepting chemotaxis sensory transducer with Cache sensor complement(2243313..2245166) Acidovorax ebreus TPSY 7383023 YP_002553544.1 CDS Dtpsy_2089 NC_011992.1 2245308 2246285 R TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: acetyl-CoA carboxylase alpha subunit; KEGG: ajs:Ajs_1625 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit complement(2245308..2246285) Acidovorax ebreus TPSY 7383024 YP_002553545.1 CDS Dtpsy_2090 NC_011992.1 2246334 2246993 R PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein; KEGG: ajs:Ajs_1624 HhH-GPD family protein; HhH-GPD family protein complement(2246334..2246993) Acidovorax ebreus TPSY 7383025 YP_002553546.1 CDS cysS NC_011992.1 2247039 2248415 R catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase complement(2247039..2248415) Acidovorax ebreus TPSY 7383026 YP_002553547.1 CDS Dtpsy_2092 NC_011992.1 2248669 2249241 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ajs:Ajs_1622 TPR repeat-containing protein; TPR repeat-containing protein 2248669..2249241 Acidovorax ebreus TPSY 7383027 YP_002553548.1 CDS Dtpsy_2093 NC_011992.1 2249323 2249910 D PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: ajs:Ajs_1621 peptidylprolyl isomerase; peptidyl-prolyl cis-trans isomerase cyclophilin type 2249323..2249910 Acidovorax ebreus TPSY 7383028 YP_002553549.1 CDS Dtpsy_2094 NC_011992.1 2249929 2250456 D PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: ajs:Ajs_1620 peptidyl-prolyl cis-trans isomerase, cyclophilin type; peptidyl-prolyl cis-trans isomerase cyclophilin type 2249929..2250456 Acidovorax ebreus TPSY 7383029 YP_002553550.1 CDS Dtpsy_2095 NC_011992.1 2250465 2251247 D TIGRFAM: UDP-2,3-diacylglucosamine hydrolase; PFAM: metallophosphoesterase; KEGG: ajs:Ajs_1619 UDP-2,3-diacylglucosamine hydrolase; UDP-2,3-diacylglucosamine hydrolase 2250465..2251247 Acidovorax ebreus TPSY 7383030 YP_002553551.1 CDS Dtpsy_2096 NC_011992.1 2251252 2252109 D PFAM: protein of unknown function DUF980; KEGG: ajs:Ajs_1618 hypothetical protein; protein of unknown function DUF980 2251252..2252109 Acidovorax ebreus TPSY 7383031 YP_002553552.1 CDS Dtpsy_2097 NC_011992.1 2252141 2254813 R paralogs to the E1 component of pyruvate dehydrogenase subunit E1; 2-oxoacid dehydrogenase subunit E1 complement(2252141..2254813) Acidovorax ebreus TPSY 7383032 YP_002553553.1 CDS Dtpsy_2098 NC_011992.1 2254915 2255382 D PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: ajs:Ajs_1616 AsnC family transcriptional regulator; transcriptional regulator, AsnC family 2254915..2255382 Acidovorax ebreus TPSY 7383033 YP_002553554.1 CDS Dtpsy_2099 NC_011992.1 2255386 2256315 R KEGG: ajs:Ajs_1615 hypothetical protein; hypothetical protein complement(2255386..2256315) Acidovorax ebreus TPSY 7383034 YP_002553555.1 CDS Dtpsy_2100 NC_011992.1 2256470 2257135 R PFAM: phospholipase/Carboxylesterase; KEGG: ajs:Ajs_1614 phospholipase/carboxylesterase; phospholipase/Carboxylesterase complement(2256470..2257135) Acidovorax ebreus TPSY 7383035 YP_002553556.1 CDS Dtpsy_2101 NC_011992.1 2257161 2257997 R PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: ajs:Ajs_1613 extradiol ring-cleavage dioxygenase III subunit B; Extradiol ring-cleavage dioxygenase class III protein subunit B complement(2257161..2257997) Acidovorax ebreus TPSY 7383036 YP_002553557.1 CDS Dtpsy_2102 NC_011992.1 2258111 2258536 R PFAM: Class I peptide chain release factor; KEGG: ajs:Ajs_1612 class I peptide chain release factor; Class I peptide chain release factor complement(2258111..2258536) Acidovorax ebreus TPSY 7383037 YP_002553558.1 CDS Dtpsy_2103 NC_011992.1 2258546 2259436 R PFAM: alpha/beta hydrolase fold; KEGG: ajs:Ajs_1611 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(2258546..2259436) Acidovorax ebreus TPSY 7383038 YP_002553559.1 CDS Dtpsy_2104 NC_011992.1 2259430 2259876 R catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase complement(2259430..2259876) Acidovorax ebreus TPSY 7383039 YP_002553560.1 CDS Dtpsy_2105 NC_011992.1 2259960 2260313 R KEGG: ajs:Ajs_1609 hypothetical protein; hypothetical protein complement(2259960..2260313) Acidovorax ebreus TPSY 7383040 YP_002553561.1 CDS Dtpsy_2106 NC_011992.1 2260505 2262367 D catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 2260505..2262367 Acidovorax ebreus TPSY 7383041 YP_002553562.1 CDS Dtpsy_2107 NC_011992.1 2262557 2263600 D PFAM: extracellular solute-binding protein family 1; KEGG: ajs:Ajs_1607 extracellular solute-binding protein; extracellular solute-binding protein family 1 2262557..2263600 Acidovorax ebreus TPSY 7383042 YP_002553563.1 CDS Dtpsy_2108 NC_011992.1 2263714 2264472 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ajs:Ajs_1606 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2263714..2264472 Acidovorax ebreus TPSY 7383043 YP_002553564.1 CDS Dtpsy_2109 NC_011992.1 2264574 2265026 R KEGG: ajs:Ajs_1605 hypothetical protein; hypothetical protein complement(2264574..2265026) Acidovorax ebreus TPSY 7383044 YP_002553565.1 CDS Dtpsy_2110 NC_011992.1 2265026 2265325 R hypothetical protein complement(2265026..2265325) Acidovorax ebreus TPSY 7383045 YP_002553566.1 CDS Dtpsy_2111 NC_011992.1 2265447 2266160 R PFAM: TadE family protein; KEGG: vei:Veis_0253 TadE family protein; TadE family protein complement(2265447..2266160) Acidovorax ebreus TPSY 7383046 YP_002553567.1 CDS Dtpsy_2112 NC_011992.1 2266213 2266986 R KEGG: mxa:MXAN_3375 putative adventurous gliding protein T; hypothetical protein complement(2266213..2266986) Acidovorax ebreus TPSY 7383047 YP_002553568.1 CDS Dtpsy_2113 NC_011992.1 2267002 2267436 R PFAM: protein of unknown function DUF192; KEGG: bpy:Bphyt_6879 protein of unknown function DUF192; protein of unknown function DUF192 complement(2267002..2267436) Acidovorax ebreus TPSY 7383048 YP_002553569.1 CDS Dtpsy_2114 NC_011992.1 2267449 2268315 R PFAM: type II secretion system protein; KEGG: vei:Veis_0249 type II secretion system protein; type II secretion system protein complement(2267449..2268315) Acidovorax ebreus TPSY 7383049 YP_002553570.1 CDS Dtpsy_2115 NC_011992.1 2268337 2269176 R PFAM: type II secretion system protein; KEGG: slo:Shew_0643 type II secretion system protein; type II secretion system protein complement(2268337..2269176) Acidovorax ebreus TPSY 7383050 YP_002553571.1 CDS Dtpsy_2116 NC_011992.1 2269177 2270961 R PFAM: Forkhead-associated protein; type II secretion system protein E; SMART: Forkhead-associated protein; KEGG: vei:Veis_0247 type II secretion system protein E; FHA domain containing protein complement(2269177..2270961) Acidovorax ebreus TPSY 7383051 YP_002553572.1 CDS Dtpsy_2117 NC_011992.1 2270980 2272050 R PFAM: type II and III secretion system protein; KEGG: reh:H16_A0982 flp pilus assembly protein secretin CpaC; type II and III secretion system protein complement(2270980..2272050) Acidovorax ebreus TPSY 7383052 YP_002553573.1 CDS Dtpsy_2119 NC_011992.1 2272281 2273015 R KEGG: slo:Shew_0648 hypothetical protein; hypothetical protein complement(2272281..2273015) Acidovorax ebreus TPSY 7383054 YP_002553574.1 CDS Dtpsy_2120 NC_011992.1 2273024 2273842 R KEGG: reh:H16_A0979 hypothetical protein; hypothetical protein complement(2273024..2273842) Acidovorax ebreus TPSY 7383055 YP_002553575.1 CDS Dtpsy_2121 NC_011992.1 2273974 2275200 D PFAM: transposase mutator type; KEGG: ajs:Ajs_2663 transposase, mutator type; transposase mutator type 2273974..2275200 Acidovorax ebreus TPSY 7383056 YP_002553576.1 CDS Dtpsy_2122 NC_011992.1 2275170 2275355 R hypothetical protein complement(2275170..2275355) Acidovorax ebreus TPSY 7383057 YP_002553577.1 CDS Dtpsy_2123 NC_011992.1 2275403 2275621 R KEGG: ajs:Ajs_1591 ParB family protein; hypothetical protein complement(2275403..2275621) Acidovorax ebreus TPSY 7383058 YP_002553578.1 CDS Dtpsy_2124 NC_011992.1 2275680 2276777 R PFAM: transposase IS4 family protein; KEGG: ajs:Ajs_3918 transposase, IS4 family protein; transposase IS4 family protein complement(2275680..2276777) Acidovorax ebreus TPSY 7383059 YP_002553579.1 CDS Dtpsy_2125 NC_011992.1 2276808 2277041 R KEGG: ajs:Ajs_1590 hypothetical protein; hypothetical protein complement(2276808..2277041) Acidovorax ebreus TPSY 7383060 YP_002553580.1 CDS Dtpsy_2126 NC_011992.1 2277262 2277666 D PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: ajs:Ajs_1589 histone family protein DNA-binding protein; histone family protein DNA-binding protein 2277262..2277666 Acidovorax ebreus TPSY 7383061 YP_002553581.1 CDS Dtpsy_2127 NC_011992.1 2277714 2278058 D hypothetical protein 2277714..2278058 Acidovorax ebreus TPSY 7383062 YP_002553582.1 CDS Dtpsy_2129 NC_011992.1 2278571 2279005 R KEGG: sew:SeSA_B0083 Hg(II)-responsive transcriptional regulator; TIGRFAM: Hg(II)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; SMART: regulatory protein MerR; putative transcriptional regulator MerR complement(2278571..2279005) Acidovorax ebreus TPSY 7383064 YP_002553583.1 CDS Dtpsy_2130 NC_011992.1 2279077 2279427 D PFAM: Mercuric transport protein MerT; KEGG: asa:ASA_P4G088 putative mercuric transport protein; putative mercuric transport protein 2279077..2279427 Acidovorax ebreus TPSY 7383065 YP_002553584.1 CDS Dtpsy_2131 NC_011992.1 2279441 2279716 D TIGRFAM: mercuric transport protein periplasmic component; PFAM: Heavy metal transport/detoxification protein; KEGG: sew:SeSA_B0081 mercuric transport protein periplasmic component; mercuric transport protein periplasmic component 2279441..2279716 Acidovorax ebreus TPSY 7383066 YP_002553585.1 CDS Dtpsy_2132 NC_011992.1 2279752 2280174 D PFAM: MerC mercury resistance protein; KEGG: kpn:KPN_pKPN4p07069 putative mercury transport protein MerC; putative mercury transport protein MerC 2279752..2280174 Acidovorax ebreus TPSY 7383067 YP_002553586.1 CDS Dtpsy_2133 NC_011992.1 2280226 2281920 D TIGRFAM: mercuric reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; Heavy metal transport/detoxification protein; KEGG: kpn:KPN_pKPN4p07068 putative mercuric reductase; putative mercuric reductase 2280226..2281920 Acidovorax ebreus TPSY 7383068 YP_002553587.1 CDS Dtpsy_2134 NC_011992.1 2281938 2282300 D KEGG: kpn:KPN_pKPN4p07067 transcriptional regulator MerD; TIGRFAM: mercuric resistence transcriptional repressor protein MerD; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; transcriptional regulator MerD 2281938..2282300 Acidovorax ebreus TPSY 7383069 YP_002553588.1 CDS Dtpsy_2135 NC_011992.1 2282297 2282533 D PFAM: MerE family protein; KEGG: kpn:KPN_pKPN4p07066 putative mercury resistance protein; putative mercury resistance protein 2282297..2282533 Acidovorax ebreus TPSY 7383070 YP_002553589.1 CDS Dtpsy_2136 NC_011992.1 2282530 2283408 D PFAM: Integrase catalytic region; EAL domain protein; SMART: EAL domain protein; KEGG: kpn:KPN_pKPN4p07065 hypothetical protein; diguanylate phosphodiesterase 2282530..2283408 Acidovorax ebreus TPSY 7383071 YP_002553590.1 CDS Dtpsy_2137 NC_011992.1 2283493 2284779 R TIGRFAM: arsenical pump membrane protein; PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: mfa:Mfla_1489 arsenical pump membrane protein; arsenical pump membrane protein complement(2283493..2284779) Acidovorax ebreus TPSY 7383072 YP_002553591.1 CDS Dtpsy_2138 NC_011992.1 2284781 2285236 R PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: mfa:Mfla_1490 signal transduction protein; putative signal transduction protein with CBS domains complement(2284781..2285236) Acidovorax ebreus TPSY 7383073 YP_002553592.1 CDS Dtpsy_2139 NC_011992.1 2285265 2287028 R KEGG: mfa:Mfla_1491 arsenite-activated ATPase (ArsA); TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; SMART: AAA ATPase; arsenite-activated ATPase ArsA complement(2285265..2287028) Acidovorax ebreus TPSY 7383074 YP_002553593.1 CDS Dtpsy_2140 NC_011992.1 2287046 2287414 R PFAM: Arsenical resistance operon trans-acting repressor ArsD; KEGG: mfa:Mfla_1492 arsenical resistance operon trans-acting repressor ArsD; Arsenical resistance operon trans-acting repressor ArsD complement(2287046..2287414) Acidovorax ebreus TPSY 7383075 YP_002553594.1 CDS Dtpsy_2141 NC_011992.1 2287454 2287933 R PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: mfa:Mfla_1493 ArsR family transcriptional regulator; Protein-tyrosine phosphatase, low molecular weight complement(2287454..2287933) Acidovorax ebreus TPSY 7383076 YP_002553595.1 CDS Dtpsy_2145 NC_011992.1 2290120 2291319 R KEGG: scl:sce3558 hypothetical protein; TIGRFAM: glycerate kinase; PFAM: glycerate kinase; glycerate kinase complement(2290120..2291319) Acidovorax ebreus TPSY 7383080 YP_002553596.1 CDS Dtpsy_2146 NC_011992.1 2291324 2291827 R TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II; KEGG: pla:Plav_3391 lipoprotein signal peptidase; lipoprotein signal peptidase complement(2291324..2291827) Acidovorax ebreus TPSY 7383081 YP_002553597.1 CDS Dtpsy_2147 NC_011992.1 2291877 2292413 R PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: shn:Shewana3_4320 signal peptidase II; phosphoesterase PA-phosphatase related complement(2291877..2292413) Acidovorax ebreus TPSY 7383082 YP_002553598.1 CDS Dtpsy_2148 NC_011992.1 2292497 2295415 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: rme:Rmet_2303 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase complement(2292497..2295415) Acidovorax ebreus TPSY 7383083 YP_002553599.1 CDS Dtpsy_2149 NC_011992.1 2295508 2295906 D KEGG: rme:Rmet_2302 transcriptional regulator, MerR family; TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; SMART: regulatory protein MerR; transcriptional regulator, MerR family 2295508..2295906 Acidovorax ebreus TPSY 7383084 YP_002553600.1 CDS Dtpsy_2150 NC_011992.1 2296205 2296828 D KEGG: rme:Rmet_2299 cation efflux protein; cation efflux protein 2296205..2296828 Acidovorax ebreus TPSY 7383085 YP_002553601.1 CDS Dtpsy_2151 NC_011992.1 2296859 2298790 R PFAM: cytochrome c class I; iron permease FTR1; KEGG: dac:Daci_0482 iron permease FTR1; iron permease FTR1 complement(2296859..2298790) Acidovorax ebreus TPSY 7383086 YP_002553602.1 CDS Dtpsy_2153 NC_011992.1 2299187 2301361 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: bpt:Bpet4570 putative heavy-metal transporting P-type ATPase; heavy metal translocating P-type ATPase complement(2299187..2301361) Acidovorax ebreus TPSY 7383088 YP_002553603.1 CDS Dtpsy_2154 NC_011992.1 2301499 2301783 D KEGG: ajs:Ajs_1487 hypothetical protein; hypothetical protein 2301499..2301783 Acidovorax ebreus TPSY 7383089 YP_002553604.1 CDS Dtpsy_2155 NC_011992.1 2301850 2302353 D PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; SMART: regulatory protein MerR; KEGG: dac:Daci_0477 MerR family transcriptional regulator; transcriptional regulator, MerR family 2301850..2302353 Acidovorax ebreus TPSY 7383090 YP_002553605.1 CDS Dtpsy_2156 NC_011992.1 2302350 2302823 D KEGG: dac:Daci_0476 hypothetical protein; hypothetical protein 2302350..2302823 Acidovorax ebreus TPSY 7383091 YP_002553606.1 CDS Dtpsy_2157 NC_011992.1 2303738 2304019 R TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: ajs:Ajs_4296 addiction module antitoxin; addiction module toxin, RelE/StbE family complement(2303738..2304019) Acidovorax ebreus TPSY 7383092 YP_002553607.1 CDS Dtpsy_2158 NC_011992.1 2304006 2304269 R TIGRFAM: addiction module antitoxin, RelB/DinJ family; PFAM: RelB antitoxin; KEGG: reu:Reut_D6453 RelB antitoxin; addiction module antitoxin, RelB/DinJ family complement(2304006..2304269) Acidovorax ebreus TPSY 7383093 YP_002553608.1 CDS Dtpsy_2160 NC_011992.1 2304927 2305145 D KEGG: reu:Reut_D6451 hypothetical protein; hypothetical protein 2304927..2305145 Acidovorax ebreus TPSY 7383095 YP_002553609.1 CDS Dtpsy_2161 NC_011992.1 2305156 2306343 D KEGG: reu:Reut_D6450 hypothetical protein; hypothetical protein 2305156..2306343 Acidovorax ebreus TPSY 7383096 YP_002553610.1 CDS Dtpsy_2162 NC_011992.1 2306360 2306617 D KEGG: reu:Reut_D6449 hypothetical protein; hypothetical protein 2306360..2306617 Acidovorax ebreus TPSY 7383097 YP_002553611.1 CDS Dtpsy_2163 NC_011992.1 2306775 2307011 D KEGG: ajs:Ajs_4302 hypothetical protein; hypothetical protein 2306775..2307011 Acidovorax ebreus TPSY 7383098 YP_002553612.1 CDS Dtpsy_2166 NC_011992.1 2308856 2309701 R KEGG: rfr:Rfer_1071 hypothetical protein; hypothetical protein complement(2308856..2309701) Acidovorax ebreus TPSY 7384151 YP_002553613.1 CDS Dtpsy_2168 NC_011992.1 2310609 2311451 R PFAM: Integrase catalytic region; KEGG: mlo:mlr6150 transposase; Integrase catalytic region complement(2310609..2311451) Acidovorax ebreus TPSY 7384473 YP_002553614.1 CDS Dtpsy_2169 NC_011992.1 2311463 2311756 R PFAM: transposase IS3/IS911 family protein; KEGG: rpi:Rpic_2066 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein complement(2311463..2311756) Acidovorax ebreus TPSY 7384474 YP_002553615.1 CDS Dtpsy_2170 NC_011992.1 2312260 2313123 R PFAM: Gp37Gp68 family protein; KEGG: rfr:Rfer_1073 phage Gp37Gp68; Gp37Gp68 family protein complement(2312260..2313123) Acidovorax ebreus TPSY 7384475 YP_002553616.1 CDS Dtpsy_2171 NC_011992.1 2313235 2314179 R PFAM: Domain of unknown function DUF1814; KEGG: vei:Veis_2690 hypothetical protein; hypothetical protein complement(2313235..2314179) Acidovorax ebreus TPSY 7384476 YP_002553617.1 CDS Dtpsy_2172 NC_011992.1 2314172 2314675 R KEGG: vei:Veis_2691 hypothetical protein; hypothetical protein complement(2314172..2314675) Acidovorax ebreus TPSY 7384477 YP_002553618.1 CDS Dtpsy_2173 NC_011992.1 2315298 2315630 D KEGG: dar:Daro_2233 hypothetical protein; hypothetical protein 2315298..2315630 Acidovorax ebreus TPSY 7384478 YP_002553619.1 CDS Dtpsy_2174 NC_011992.1 2315938 2316612 D KEGG: ajs:Ajs_1580 hypothetical protein; hypothetical protein 2315938..2316612 Acidovorax ebreus TPSY 7384479 YP_002553620.1 CDS Dtpsy_2175 NC_011992.1 2316685 2318097 R KEGG: reh:PHG163 hypothetical protein; hypothetical protein complement(2316685..2318097) Acidovorax ebreus TPSY 7384480 YP_002553621.1 CDS Dtpsy_2176 NC_011992.1 2318112 2319023 R KEGG: dar:Daro_2333 hypothetical protein; hypothetical protein complement(2318112..2319023) Acidovorax ebreus TPSY 7384481 YP_002553622.1 CDS Dtpsy_2181 NC_011992.1 2319960 2320244 R KEGG: dac:Daci_0472 hypothetical protein; hypothetical protein complement(2319960..2320244) Acidovorax ebreus TPSY 7384486 YP_002553623.1 CDS Dtpsy_2183 NC_011992.1 2320634 2323765 R TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: ajs:Ajs_2703 CzcA family heavy metal efflux protein; heavy metal efflux pump, CzcA family complement(2320634..2323765) Acidovorax ebreus TPSY 7384488 YP_002553624.1 CDS Dtpsy_2184 NC_011992.1 2323781 2325394 R TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: ajs:Ajs_2704 RND family efflux transporter MFP subunit; efflux transporter, RND family, MFP subunit complement(2323781..2325394) Acidovorax ebreus TPSY 7384489 YP_002553625.1 CDS Dtpsy_2185 NC_011992.1 2325391 2326665 R PFAM: outer membrane efflux protein; KEGG: ajs:Ajs_2705 outer membrane efflux protein; outer membrane efflux protein complement(2325391..2326665) Acidovorax ebreus TPSY 7384490 YP_002553626.1 CDS Dtpsy_2186 NC_011992.1 2326662 2326910 R KEGG: ajs:Ajs_1480 hypothetical protein; hypothetical protein complement(2326662..2326910) Acidovorax ebreus TPSY 7384491 YP_002553627.1 CDS Dtpsy_2187 NC_011992.1 2326966 2328246 R KEGG: ajs:Ajs_2707 membrane protein-like protein; membrane protein-like protein complement(2326966..2328246) Acidovorax ebreus TPSY 7384492 YP_002553628.1 CDS Dtpsy_2188 NC_011992.1 2328243 2328398 R KEGG: ajs:Ajs_1478 hypothetical protein; hypothetical protein complement(2328243..2328398) Acidovorax ebreus TPSY 7384493 YP_002553629.1 CDS Dtpsy_2189 NC_011992.1 2328816 2329862 R TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: ajs:Ajs_1471 YVTN beta-propeller repeat-containing protein; 40-residue YVTN family beta-propeller repeat protein complement(2328816..2329862) Acidovorax ebreus TPSY 7384494 YP_002553630.1 CDS Dtpsy_2190 NC_011992.1 2329899 2331806 R KEGG: ajs:Ajs_2709 hypothetical protein; hypothetical protein complement(2329899..2331806) Acidovorax ebreus TPSY 7384495 YP_002553631.1 CDS Dtpsy_2191 NC_011992.1 2331827 2334169 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: ajs:Ajs_2710 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase complement(2331827..2334169) Acidovorax ebreus TPSY 7384496 YP_002553632.1 CDS Dtpsy_2192 NC_011992.1 2334279 2334779 R PFAM: cytochrome c class I; KEGG: dsh:Dshi_0189 cytochrome c class I; cytochrome c class I complement(2334279..2334779) Acidovorax ebreus TPSY 7384497 YP_002553633.1 CDS Dtpsy_2193 NC_011992.1 2334835 2335482 R KEGG: pol:Bpro_1176 isoprenylcysteine carboxyl methyltransferase; isoprenylcysteine carboxyl methyltransferase complement(2334835..2335482) Acidovorax ebreus TPSY 7384498 YP_002553634.1 CDS Dtpsy_2194 NC_011992.1 2335469 2335765 R KEGG: ajs:Ajs_2714 hypothetical protein; hypothetical protein complement(2335469..2335765) Acidovorax ebreus TPSY 7384499 YP_002553635.1 CDS Dtpsy_2195 NC_011992.1 2335776 2336255 R KEGG: ajs:Ajs_2715 hypothetical protein; hypothetical protein complement(2335776..2336255) Acidovorax ebreus TPSY 7384500 YP_002553636.1 CDS Dtpsy_2196 NC_011992.1 2336328 2336672 R KEGG: ajs:Ajs_1463 hypothetical protein; hypothetical protein complement(2336328..2336672) Acidovorax ebreus TPSY 7384501 YP_002553637.1 CDS Dtpsy_2197 NC_011992.1 2336732 2337226 R PFAM: blue (type 1) copper domain protein; KEGG: ajs:Ajs_2721 blue (type1) copper domain-containing protein; blue (type 1) copper domain protein complement(2336732..2337226) Acidovorax ebreus TPSY 7384502 YP_002553638.1 CDS Dtpsy_2198 NC_011992.1 2337261 2338673 R PFAM: multicopper oxidase type 2; multicopper oxidase type 3; KEGG: ajs:Ajs_2722 multicopper oxidase, type 3; multicopper oxidase type 3 complement(2337261..2338673) Acidovorax ebreus TPSY 7384503 YP_002553639.1 CDS Dtpsy_2199 NC_011992.1 2338690 2340120 R KEGG: ajs:Ajs_2723 putative copper resistance-related lipoprotein; putative copper resistance-related lipoprotein complement(2338690..2340120) Acidovorax ebreus TPSY 7384504 YP_002553640.1 CDS Dtpsy_2200 NC_011992.1 2340117 2340515 R KEGG: ajs:Ajs_2724 hypothetical protein; hypothetical protein complement(2340117..2340515) Acidovorax ebreus TPSY 7384505 YP_002553641.1 CDS Dtpsy_2201 NC_011992.1 2340608 2341291 D KEGG: ajs:Ajs_2725 two component heavy metal response transcriptional regulator; TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; two component heavy metal response transcriptional regulator, winged helix family 2340608..2341291 Acidovorax ebreus TPSY 7384506 YP_002553642.1 CDS Dtpsy_2202 NC_011992.1 2341292 2342695 D KEGG: ajs:Ajs_2726 heavy metal sensor signal transduction histidine kinase; TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; heavy metal sensor signal transduction histidine kinase 2341292..2342695 Acidovorax ebreus TPSY 7384507 YP_002553643.1 CDS Dtpsy_2203 NC_011992.1 2342842 2343195 D KEGG: ajs:Ajs_2727 hypothetical protein; hypothetical protein 2342842..2343195 Acidovorax ebreus TPSY 7384508 YP_002553644.1 CDS Dtpsy_2204 NC_011992.1 2343832 2344497 D PFAM: Rhodanese domain protein; regulatory protein ArsR; SMART: Rhodanese domain protein; regulatory protein ArsR; KEGG: rfr:Rfer_0462 ArsR family transcriptional regulator; transcriptional regulator, ArsR family 2343832..2344497 Acidovorax ebreus TPSY 7384509 YP_002553645.1 CDS Dtpsy_2205 NC_011992.1 2344503 2345075 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sse:Ssed_3127 methyltransferase type 11; Methyltransferase type 11 2344503..2345075 Acidovorax ebreus TPSY 7384510 YP_002553646.1 CDS Dtpsy_2206 NC_011992.1 2345098 2345454 D PFAM: DsrE family protein; KEGG: sse:Ssed_3126 DsrE family protein; DsrE family protein 2345098..2345454 Acidovorax ebreus TPSY 7384511 YP_002553647.1 CDS Dtpsy_2207 NC_011992.1 2345480 2346139 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: afe:Lferr_0905 methyltransferase type 11; Methyltransferase type 11 2345480..2346139 Acidovorax ebreus TPSY 7384512 YP_002553648.1 CDS Dtpsy_2209 NC_011992.1 2347036 2348337 D PFAM: outer membrane efflux protein; KEGG: tbd:Tbd_1329 cobalt-zinc-cadmium outer membrane resistance protein; outer membrane efflux protein 2347036..2348337 Acidovorax ebreus TPSY 7384514 YP_002553649.1 CDS Dtpsy_2210 NC_011992.1 2348341 2349936 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: har:HEAR0523 cobalt-zinc-cadmium resistance protein CzcB (cation efflux system protein CzcB); efflux transporter, RND family, MFP subunit 2348341..2349936 Acidovorax ebreus TPSY 7384515 YP_002553650.1 CDS Dtpsy_2211 NC_011992.1 2349947 2350288 D PFAM: nitrogen regulatory protein P-II; KEGG: har:HEAR1599 regulatory protein PII; nitrogen regulatory protein P-II 2349947..2350288 Acidovorax ebreus TPSY 7384516 YP_002553651.1 CDS Dtpsy_2212 NC_011992.1 2350312 2353470 D TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: tbd:Tbd_1327 heavy metal efflux pump CzcA; heavy metal efflux pump, CzcA family 2350312..2353470 Acidovorax ebreus TPSY 7384517 YP_002553652.1 CDS Dtpsy_2213 NC_011992.1 2353506 2355179 D PFAM: sulfatase; protein of unknown function DUF1705; KEGG: mms:mma_0057 inner membrane protein; sulfatase 2353506..2355179 Acidovorax ebreus TPSY 7384518 YP_002553653.1 CDS Dtpsy_2214 NC_011992.1 2355315 2357822 D TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: mes:Meso_4435 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase 2355315..2357822 Acidovorax ebreus TPSY 7384519 YP_002553654.1 CDS Dtpsy_2215 NC_011992.1 2357944 2358630 D KEGG: dac:Daci_1091 two component heavy metal response transcriptional regulator; TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; two component heavy metal response transcriptional regulator, winged helix family 2357944..2358630 Acidovorax ebreus TPSY 7384520 YP_002553655.1 CDS Dtpsy_2216 NC_011992.1 2358627 2360000 D KEGG: mpt:Mpe_A1630 putative two-component sensor; TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; heavy metal sensor signal transduction histidine kinase 2358627..2360000 Acidovorax ebreus TPSY 7384521 YP_002553656.1 CDS Dtpsy_2217 NC_011992.1 2360194 2361240 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: pen:PSEEN4649 hypothetical protein; protein of unknown function DUF6 transmembrane complement(2360194..2361240) Acidovorax ebreus TPSY 7384522 YP_002553657.1 CDS Dtpsy_2218 NC_011992.1 2361525 2361878 D KEGG: ajs:Ajs_2727 hypothetical protein; hypothetical protein 2361525..2361878 Acidovorax ebreus TPSY 7384523 YP_002553658.1 CDS Dtpsy_2219 NC_011992.1 2362135 2362413 D PFAM: transposase IS3/IS911 family protein; KEGG: ajs:Ajs_1845 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 2362135..2362413 Acidovorax ebreus TPSY 7384524 YP_002553659.1 CDS Dtpsy_2220 NC_011992.1 2362410 2363285 D PFAM: Integrase catalytic region; KEGG: ajs:Ajs_1844 integrase catalytic subunit; Integrase catalytic region 2362410..2363285 Acidovorax ebreus TPSY 7384525 YP_002553660.1 CDS Dtpsy_2221 NC_011992.1 2363386 2363739 D KEGG: ajs:Ajs_2728 hypothetical protein; hypothetical protein 2363386..2363739 Acidovorax ebreus TPSY 7384526 YP_002553661.1 CDS Dtpsy_2222 NC_011992.1 2363866 2364993 R KEGG: mpt:Mpe_B0526 ISRSO5-transposase protein; ISRSO5-transposase protein complement(2363866..2364993) Acidovorax ebreus TPSY 7384527 YP_002553662.1 CDS gltX NC_011992.1 2366240 2367649 R Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase complement(2366240..2367649) Acidovorax ebreus TPSY 7384535 YP_002553663.1 CDS Dtpsy_2225 NC_011992.1 2367646 2368860 R KEGG: ajs:Ajs_2735 O-succinylhomoserine sulfhydrylase; TIGRFAM: O-succinylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; O-succinylhomoserine sulfhydrylase complement(2367646..2368860) Acidovorax ebreus TPSY 7384536 YP_002553664.1 CDS Dtpsy_2226 NC_011992.1 2368991 2370499 R Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase complement(2368991..2370499) Acidovorax ebreus TPSY 7384537 YP_002553665.1 CDS Dtpsy_2227 NC_011992.1 2370577 2371065 R PFAM: Colicin V production protein; KEGG: ajs:Ajs_2737 colicin V production protein; Colicin V production protein complement(2370577..2371065) Acidovorax ebreus TPSY 7384538 YP_002553666.1 CDS Dtpsy_2228 NC_011992.1 2371106 2371948 R PFAM: Sporulation domain protein; KEGG: ajs:Ajs_2738 sporulation domain-containing protein; Sporulation domain protein complement(2371106..2371948) Acidovorax ebreus TPSY 7384539 YP_002553667.1 CDS Dtpsy_2229 NC_011992.1 2371963 2373288 R TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: ajs:Ajs_2739 FolC bifunctional protein; FolC bifunctional protein complement(2371963..2373288) Acidovorax ebreus TPSY 7384540 YP_002553668.1 CDS Dtpsy_2230 NC_011992.1 2373336 2373722 D PFAM: arsenate reductase and related; KEGG: ajs:Ajs_2740 arsenate reductase and related; arsenate reductase and related 2373336..2373722 Acidovorax ebreus TPSY 7384541 YP_002553669.1 CDS Dtpsy_2231 NC_011992.1 2373836 2374516 D PFAM: 17 kDa surface antigen; KEGG: ajs:Ajs_2741 17 kDa surface antigen; 17 kDa surface antigen 2373836..2374516 Acidovorax ebreus TPSY 7384542 YP_002553670.1 CDS Dtpsy_2232 NC_011992.1 2374687 2375004 D PFAM: protein of unknown function DUF1255; KEGG: ajs:Ajs_2742 hypothetical protein; protein of unknown function DUF1255 2374687..2375004 Acidovorax ebreus TPSY 7384543 YP_002553671.1 CDS Dtpsy_2233 NC_011992.1 2375071 2376417 D catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis; argininosuccinate synthase 2375071..2376417 Acidovorax ebreus TPSY 7384544 YP_002553672.1 CDS Dtpsy_2234 NC_011992.1 2376507 2377226 R TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: ajs:Ajs_2744 ExsB protein; exsB protein complement(2376507..2377226) Acidovorax ebreus TPSY 7384545 YP_002553673.1 CDS Dtpsy_2235 NC_011992.1 2377223 2377891 R TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF165; KEGG: ajs:Ajs_2745 hypothetical protein; hypothetical protein complement(2377223..2377891) Acidovorax ebreus TPSY 7384546 YP_002553674.1 CDS Dtpsy_2236 NC_011992.1 2378238 2379101 D TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: ajs:Ajs_2746 ECF subfamily RNA polymerase sigma-24 factor; RNA polymerase, sigma-24 subunit, ECF subfamily 2378238..2379101 Acidovorax ebreus TPSY 7384547 YP_002553675.1 CDS Dtpsy_2237 NC_011992.1 2379184 2379639 D TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: ajs:Ajs_2747 alkylhydroperoxidase; alkylhydroperoxidase like protein, AhpD family 2379184..2379639 Acidovorax ebreus TPSY 7384548 YP_002553676.1 CDS Dtpsy_2238 NC_011992.1 2379783 2381315 D TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: ajs:Ajs_2748 anion transporter; anion transporter 2379783..2381315 Acidovorax ebreus TPSY 7384549 YP_002553677.1 CDS Dtpsy_2239 NC_011992.1 2381421 2382497 R KEGG: ajs:Ajs_2749 UDP-N-acetylmuramate dehydrogenase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: FAD linked oxidase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase complement(2381421..2382497) Acidovorax ebreus TPSY 7384550 YP_002553678.1 CDS Dtpsy_2240 NC_011992.1 2382565 2383050 D putative nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; putative nucleotide-binding protein 2382565..2383050 Acidovorax ebreus TPSY 7384551 YP_002553679.1 CDS Dtpsy_2241 NC_011992.1 2383067 2383711 D KEGG: ajs:Ajs_2751 hypothetical protein; hypothetical protein 2383067..2383711 Acidovorax ebreus TPSY 7384552 YP_002553680.1 CDS Dtpsy_2242 NC_011992.1 2383734 2384735 D KEGG: ajs:Ajs_2752 putative metal dependent phosphohydrolase; putative metal dependent phosphohydrolase 2383734..2384735 Acidovorax ebreus TPSY 7382855 YP_002553681.1 CDS Dtpsy_2243 NC_011992.1 2384814 2385449 R PFAM: protein of unknown function DUF205; KEGG: ajs:Ajs_2753 acyl-phosphate glycerol-3-phosphate acyltransferase; protein of unknown function DUF205 complement(2384814..2385449) Acidovorax ebreus TPSY 7384835 YP_002553682.1 CDS Dtpsy_2244 NC_011992.1 2385495 2385995 R TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: ajs:Ajs_2754 YbaK/EbsC protein; ybaK/ebsC protein complement(2385495..2385995) Acidovorax ebreus TPSY 7384836 YP_002553683.1 CDS Dtpsy_2245 NC_011992.1 2386061 2387122 R PFAM: aldo/keto reductase; KEGG: ajs:Ajs_2755 aldo/keto reductase; aldo/keto reductase complement(2386061..2387122) Acidovorax ebreus TPSY 7384837 YP_002553684.1 CDS Dtpsy_2246 NC_011992.1 2387250 2388185 D PFAM: alpha/beta hydrolase fold; KEGG: ajs:Ajs_2756 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 2387250..2388185 Acidovorax ebreus TPSY 7384838 YP_002553685.1 CDS Dtpsy_2247 NC_011992.1 2388394 2389401 D TIGRFAM: diaminopimelate dehydrogenase; KEGG: ajs:Ajs_2757 diaminopimelate dehydrogenase; diaminopimelate dehydrogenase 2388394..2389401 Acidovorax ebreus TPSY 7384839 YP_002553686.1 CDS Dtpsy_2248 NC_011992.1 2389589 2390693 D KEGG: bpm:BURPS1710b_3602 hypothetical protein; hypothetical protein join(2389589..2389669,2389671..2390693) Acidovorax ebreus TPSY 7384840 YP_002553687.1 CDS pepN NC_011992.1 2390739 2393450 D TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: ajs:Ajs_2759 alanyl aminopeptidase; aminopeptidase N 2390739..2393450 Acidovorax ebreus TPSY 7384841 YP_002553688.1 CDS Dtpsy_2250 NC_011992.1 2393462 2394481 D catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 2393462..2394481 Acidovorax ebreus TPSY 7384842 YP_002553689.1 CDS Dtpsy_2251 NC_011992.1 2394654 2395781 D catalyzes the formation of a phosphodiester at the site of a single-strand break in duplex DNA; DNA ligase 2394654..2395781 Acidovorax ebreus TPSY 7384844 YP_002553690.1 CDS Dtpsy_2252 NC_011992.1 2395892 2398261 R PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: ajs:Ajs_2762 ornithine decarboxylase; Lysine decarboxylase complement(2395892..2398261) Acidovorax ebreus TPSY 7384845 YP_002553691.1 CDS Dtpsy_2253 NC_011992.1 2398430 2398861 D KEGG: ajs:Ajs_2763 hypothetical protein; hypothetical protein 2398430..2398861 Acidovorax ebreus TPSY 7384846 YP_002553692.1 CDS Dtpsy_2254 NC_011992.1 2398941 2399855 D PFAM: band 7 protein; SMART: band 7 protein; KEGG: ajs:Ajs_2764 SPFH domain-containing protein/band 7 family protein; band 7 protein 2398941..2399855 Acidovorax ebreus TPSY 7384847 YP_002553693.1 CDS Dtpsy_2255 NC_011992.1 2399937 2400230 D PFAM: ferredoxin; KEGG: ajs:Ajs_2765 ferredoxin; ferredoxin 2399937..2400230 Acidovorax ebreus TPSY 7384848 YP_002553694.1 CDS Dtpsy_2256 NC_011992.1 2400489 2401610 D TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: ajs:Ajs_2766 3,4-dihydroxy-2-butanone 4-phosphate synthase; 3,4-dihydroxy-2-butanone 4-phosphate synthase 2400489..2401610 Acidovorax ebreus TPSY 7384849 YP_002553695.1 CDS ribH NC_011992.1 2401614 2402078 D RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 2401614..2402078 Acidovorax ebreus TPSY 7384850 YP_002553696.1 CDS Dtpsy_2258 NC_011992.1 2402075 2402608 D TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: ajs:Ajs_2768 NusB antitermination factor; NusB antitermination factor 2402075..2402608 Acidovorax ebreus TPSY 7384851 YP_002553697.1 CDS Dtpsy_2259 NC_011992.1 2402702 2403886 D PFAM: aminotransferase class I and II; KEGG: ajs:Ajs_2769 aminotransferase; aminotransferase 2402702..2403886 Acidovorax ebreus TPSY 7384852 YP_002553698.1 CDS Dtpsy_2260 NC_011992.1 2403906 2404331 D TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: ajs:Ajs_2770 4-hydroxybenzoyl-CoA thioesterase; tol-pal system-associated acyl-CoA thioesterase 2403906..2404331 Acidovorax ebreus TPSY 7384853 YP_002553699.1 CDS Dtpsy_2261 NC_011992.1 2404328 2405029 D TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: ajs:Ajs_2771 MotA/TolQ/ExbB proton channel; protein TolQ 2404328..2405029 Acidovorax ebreus TPSY 7384854 YP_002553700.1 CDS Dtpsy_2262 NC_011992.1 2405209 2405634 D PFAM: Biopolymer transport protein ExbD/TolR; KEGG: ajs:Ajs_2772 biopolymer transport protein ExbD/TolR; Biopolymer transport protein ExbD/TolR 2405209..2405634 Acidovorax ebreus TPSY 7384855 YP_002553701.1 CDS Dtpsy_2263 NC_011992.1 2405656 2406627 D TIGRFAM: TonB family protein; protein TolA; PFAM: Tol-Pal system TolA; KEGG: ajs:Ajs_2773 TonB family protein; protein TolA 2405656..2406627 Acidovorax ebreus TPSY 7384856 YP_002553702.1 CDS Dtpsy_2264 NC_011992.1 2406750 2408081 R PFAM: General substrate transporter; KEGG: ajs:Ajs_2774 general substrate transporter; General substrate transporter complement(2406750..2408081) Acidovorax ebreus TPSY 7384857 YP_002553703.1 CDS Dtpsy_2265 NC_011992.1 2408393 2409442 D TIGRFAM: ubiquinol oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; COX aromatic rich domain protein; KEGG: ajs:Ajs_2775 ubiquinol oxidase, subunit II; ubiquinol oxidase, subunit II 2408393..2409442 Acidovorax ebreus TPSY 7384858 YP_002553704.1 CDS Dtpsy_2266 NC_011992.1 2409504 2411510 D KEGG: ajs:Ajs_2776 cytochrome-c oxidase; TIGRFAM: cytochrome o ubiquinol oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; cytochrome o ubiquinol oxidase, subunit I 2409504..2411510 Acidovorax ebreus TPSY 7384859 YP_002553705.1 CDS Dtpsy_2267 NC_011992.1 2411503 2412138 D TIGRFAM: cytochrome o ubiquinol oxidase, subunit III; PFAM: cytochrome c oxidase subunit III; KEGG: ajs:Ajs_2777 cytochrome c oxidase, subunit III; cytochrome o ubiquinol oxidase, subunit III 2411503..2412138 Acidovorax ebreus TPSY 7384860 YP_002553706.1 CDS Dtpsy_2268 NC_011992.1 2412139 2412558 D TIGRFAM: cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV; KEGG: ajs:Ajs_2778 cytochrome c oxidase subunit IV; cytochrome o ubiquinol oxidase subunit IV 2412139..2412558 Acidovorax ebreus TPSY 7384861 YP_002553707.1 CDS Dtpsy_2269 NC_011992.1 2412570 2413379 D PFAM: Surfeit locus 1 family protein; KEGG: ajs:Ajs_2779 surfeit locus 1 family protein; Surfeit locus 1 family protein 2412570..2413379 Acidovorax ebreus TPSY 7384862 YP_002553708.1 CDS Dtpsy_2270 NC_011992.1 2413376 2414719 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: ajs:Ajs_2780 integral membrane sensor signal transduction histidine kinase; histidine kinase 2413376..2414719 Acidovorax ebreus TPSY 7384863 YP_002553709.1 CDS Dtpsy_2271 NC_011992.1 2414709 2415242 D PFAM: response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; KEGG: ajs:Ajs_2781 two component fis family transcriptional regulator; two component transcriptional regulator, Fis family 2414709..2415242 Acidovorax ebreus TPSY 7384864 YP_002553710.1 CDS Dtpsy_2272 NC_011992.1 2415369 2415998 D KEGG: ajs:Ajs_2782 glutathione S-transferase-like protein; Glutathione S-transferase-like protein 2415369..2415998 Acidovorax ebreus TPSY 7384865 YP_002553711.1 CDS Dtpsy_2273 NC_011992.1 2416325 2417701 D PFAM: peptidase U32; KEGG: ajs:Ajs_2783 peptidase U32; peptidase U32 2416325..2417701 Acidovorax ebreus TPSY 7384866 YP_002553712.1 CDS Dtpsy_2274 NC_011992.1 2417850 2418734 D KEGG: ajs:Ajs_2784 hypothetical protein; hypothetical protein 2417850..2418734 Acidovorax ebreus TPSY 7384867 YP_002553713.1 CDS Dtpsy_2275 NC_011992.1 2418742 2419173 R KEGG: ajs:Ajs_2785 hypothetical protein; hypothetical protein complement(2418742..2419173) Acidovorax ebreus TPSY 7384868 YP_002553714.1 CDS Dtpsy_2276 NC_011992.1 2419279 2420094 D PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: ajs:Ajs_2786 XRE family transcriptional regulator; transcriptional regulator, XRE family 2419279..2420094 Acidovorax ebreus TPSY 7384869 YP_002553715.1 CDS Dtpsy_2277 NC_011992.1 2420314 2422905 R catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase complement(2420314..2422905) Acidovorax ebreus TPSY 7384870 YP_002553716.1 CDS Dtpsy_2278 NC_011992.1 2423020 2423640 R KEGG: ajs:Ajs_2788 hypothetical protein; hypothetical protein complement(2423020..2423640) Acidovorax ebreus TPSY 7384871 YP_002553717.1 CDS Dtpsy_2279 NC_011992.1 2423700 2424710 R PFAM: HpcH/HpaI aldolase; KEGG: ajs:Ajs_2789 HpcH/HpaI aldolase; HpcH/HpaI aldolase complement(2423700..2424710) Acidovorax ebreus TPSY 7384872 YP_002553718.1 CDS Dtpsy_2280 NC_011992.1 2424707 2425483 R catalyzes the formation of (E)-3-(methoxycarbonyl)pent-2-enedioate and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and trans-aconitate; trans-aconitate 2-methyltransferase complement(2424707..2425483) Acidovorax ebreus TPSY 7384873 YP_002553719.1 CDS Dtpsy_2281 NC_011992.1 2425496 2426482 R catalyzes the oxidation of malate to oxaloacetate; malate dehydrogenase complement(2425496..2426482) Acidovorax ebreus TPSY 7384874 YP_002553720.1 CDS Dtpsy_2282 NC_011992.1 2426683 2427471 D PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; SMART: regulatory protein GntR HTH; KEGG: ajs:Ajs_2792 GntR family transcriptional regulator; transcriptional regulator, GntR family 2426683..2427471 Acidovorax ebreus TPSY 7384875 YP_002553721.1 CDS Dtpsy_2283 NC_011992.1 2427609 2428043 D TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: ajs:Ajs_2793 succinate dehydrogenase subunit C; succinate dehydrogenase, cytochrome b556 subunit 2427609..2428043 Acidovorax ebreus TPSY 7384876 YP_002553722.1 CDS Dtpsy_2284 NC_011992.1 2428091 2428456 D TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; KEGG: ajs:Ajs_2794 succinate dehydrogenase subunit D; succinate dehydrogenase, hydrophobic membrane anchor protein 2428091..2428456 Acidovorax ebreus TPSY 7384877 YP_002553723.1 CDS Dtpsy_2285 NC_011992.1 2428479 2430284 D KEGG: ajs:Ajs_2795 succinate dehydrogenase subunit A; TIGRFAM: succinate dehydrogenase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; succinate dehydrogenase, flavoprotein subunit 2428479..2430284 Acidovorax ebreus TPSY 7384878 YP_002553724.1 CDS Dtpsy_2286 NC_011992.1 2430315 2431019 D KEGG: ajs:Ajs_2796 succinate dehydrogenase subunit B; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin; succinate dehydrogenase and fumarate reductase iron-sulfur protein 2430315..2431019 Acidovorax ebreus TPSY 7384879 YP_002553725.1 CDS Dtpsy_2287 NC_011992.1 2431025 2431297 D PFAM: protein of unknown function DUF339; KEGG: ajs:Ajs_2797 hypothetical protein; protein of unknown function DUF339 2431025..2431297 Acidovorax ebreus TPSY 7384880 YP_002553726.1 CDS gltA NC_011992.1 2431340 2432650 D type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; type II citrate synthase 2431340..2432650 Acidovorax ebreus TPSY 7384881 YP_002553727.1 CDS Dtpsy_2289 NC_011992.1 2432962 2433228 D PFAM: protein of unknown function DUF156; KEGG: ajs:Ajs_2799 hypothetical protein; protein of unknown function DUF156 2432962..2433228 Acidovorax ebreus TPSY 7384882 YP_002553728.1 CDS Dtpsy_2290 NC_011992.1 2433264 2434379 D TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ajs:Ajs_2800 alcohol dehydrogenase; S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2433264..2434379 Acidovorax ebreus TPSY 7384883 YP_002553729.1 CDS Dtpsy_2291 NC_011992.1 2434486 2435370 D KEGG: ajs:Ajs_2801 carboxylesterase; TIGRFAM: S-formylglutathione hydrolase; PFAM: putative esterase; S-formylglutathione hydrolase 2434486..2435370 Acidovorax ebreus TPSY 7384884 YP_002553730.1 CDS Dtpsy_2292 NC_011992.1 2435561 2435860 R PFAM: Antibiotic biosynthesis monooxygenase; KEGG: ajs:Ajs_2802 antibiotic biosynthesis monooxygenase; Antibiotic biosynthesis monooxygenase complement(2435561..2435860) Acidovorax ebreus TPSY 7384885 YP_002553731.1 CDS Dtpsy_2293 NC_011992.1 2435915 2437072 R PFAM: Radical SAM domain protein; KEGG: ajs:Ajs_2803 radical SAM domain-containing protein; Radical SAM domain protein complement(2435915..2437072) Acidovorax ebreus TPSY 7384886 YP_002553732.1 CDS Dtpsy_2294 NC_011992.1 2437351 2437758 D PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: ajs:Ajs_2805 GreA/GreB family elongation factor; GreA/GreB family elongation factor 2437351..2437758 Acidovorax ebreus TPSY 7384887 YP_002553733.1 CDS Dtpsy_2295 NC_011992.1 2437814 2438977 R PFAM: acyltransferase 3; KEGG: ajs:Ajs_2806 acyltransferase 3; acyltransferase 3 complement(2437814..2438977) Acidovorax ebreus TPSY 7384888 YP_002553734.1 CDS Dtpsy_2296 NC_011992.1 2439164 2440120 R PFAM: 2-nitropropane dioxygenase NPD; KEGG: ajs:Ajs_2807 2-nitropropane dioxygenase, NPD; 2-nitropropane dioxygenase NPD complement(2439164..2440120) Acidovorax ebreus TPSY 7384889 YP_002553735.1 CDS Dtpsy_2297 NC_011992.1 2440199 2441989 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_2808 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase domain protein complement(2440199..2441989) Acidovorax ebreus TPSY 7384890 YP_002553736.1 CDS Dtpsy_2298 NC_011992.1 2442070 2443002 R PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: ajs:Ajs_2809 electron transfer flavoprotein, alpha subunit; Electron transfer flavoprotein alpha subunit complement(2442070..2443002) Acidovorax ebreus TPSY 7384891 YP_002553737.1 CDS Dtpsy_2299 NC_011992.1 2443024 2443773 R PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: ajs:Ajs_2810 electron transfer flavoprotein beta-subunit; Electron transfer flavoprotein alpha/beta-subunit complement(2443024..2443773) Acidovorax ebreus TPSY 7384892 YP_002553738.1 CDS Dtpsy_2300 NC_011992.1 2443935 2445218 R PFAM: MscS Mechanosensitive ion channel; KEGG: ajs:Ajs_2811 MscS mechanosensitive ion channel; MscS Mechanosensitive ion channel complement(2443935..2445218) Acidovorax ebreus TPSY 7384893 YP_002553739.1 CDS Dtpsy_2301 NC_011992.1 2445238 2446056 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ajs:Ajs_2812 enoyl-CoA hydratase; Enoyl-CoA hydratase/isomerase complement(2445238..2446056) Acidovorax ebreus TPSY 7384894 YP_002553740.1 CDS Dtpsy_2302 NC_011992.1 2446105 2447064 R PFAM: histone deacetylase superfamily; KEGG: ajs:Ajs_2813 histone deacetylase superfamily protein; histone deacetylase superfamily complement(2446105..2447064) Acidovorax ebreus TPSY 7384895 YP_002553741.1 CDS Dtpsy_2303 NC_011992.1 2447103 2448023 D PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: ajs:Ajs_2814 ATPase; ATPase associated with various cellular activities AAA_3 2447103..2448023 Acidovorax ebreus TPSY 7384896 YP_002553742.1 CDS Dtpsy_2304 NC_011992.1 2448028 2449053 D PFAM: protein of unknown function DUF58; KEGG: ajs:Ajs_2815 hypothetical protein; protein of unknown function DUF58 2448028..2449053 Acidovorax ebreus TPSY 7384897 YP_002553743.1 CDS Dtpsy_2305 NC_011992.1 2449153 2451219 D PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: ajs:Ajs_2816 transglutaminase domain-containing protein; transglutaminase domain protein 2449153..2451219 Acidovorax ebreus TPSY 7384898 YP_002553744.1 CDS Dtpsy_2306 NC_011992.1 2451216 2452289 D TIGRFAM: lytic murein transglycosylase B; KEGG: ajs:Ajs_2817 lytic murein transglycosylase B; lytic murein transglycosylase B 2451216..2452289 Acidovorax ebreus TPSY 7384899 YP_002553745.1 CDS Dtpsy_2307 NC_011992.1 2452303 2453217 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_2818 LysR family transcriptional regulator; transcriptional regulator, LysR family complement(2452303..2453217) Acidovorax ebreus TPSY 7384900 YP_002553746.1 CDS Dtpsy_2308 NC_011992.1 2453331 2454413 D PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_2819 hypothetical protein; hypothetical protein 2453331..2454413 Acidovorax ebreus TPSY 7384901 YP_002553747.1 CDS Dtpsy_2309 NC_011992.1 2454414 2455715 R KEGG: ajs:Ajs_2820 putative transporter signal peptide protein; putative transporter signal peptide protein complement(2454414..2455715) Acidovorax ebreus TPSY 7384902 YP_002553748.1 CDS Dtpsy_2310 NC_011992.1 2455780 2456652 R KEGG: ajs:Ajs_2821 putative lipoprotein; putative lipoprotein complement(2455780..2456652) Acidovorax ebreus TPSY 7384903 YP_002553749.1 CDS Dtpsy_2311 NC_011992.1 2456844 2457242 D PFAM: CS; KEGG: ajs:Ajs_2822 CS protein; CS protein 2456844..2457242 Acidovorax ebreus TPSY 7384904 YP_002553750.1 CDS Dtpsy_2312 NC_011992.1 2457495 2458703 R PFAM: protein of unknown function DUF214; KEGG: ajs:Ajs_2823 hypothetical protein; protein of unknown function DUF214 complement(2457495..2458703) Acidovorax ebreus TPSY 7384905 YP_002553751.1 CDS Dtpsy_2313 NC_011992.1 2458700 2459470 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_2824 ABC transporter related; ABC transporter related complement(2458700..2459470) Acidovorax ebreus TPSY 7384906 YP_002553752.1 CDS Dtpsy_2314 NC_011992.1 2459467 2460867 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: ajs:Ajs_2825 fis family transcriptional regulator; efflux transporter, RND family, MFP subunit complement(2459467..2460867) Acidovorax ebreus TPSY 7384907 YP_002553753.1 CDS Dtpsy_2315 NC_011992.1 2460939 2462366 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: ajs:Ajs_2826 RND efflux system outer membrane lipoprotein; RND efflux system, outer membrane lipoprotein, NodT family complement(2460939..2462366) Acidovorax ebreus TPSY 7384908 YP_002553754.1 CDS Dtpsy_2317 NC_011992.1 2464045 2465094 R in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; putative DNA-binding/iron metalloprotein/AP endonuclease complement(2464045..2465094) Acidovorax ebreus TPSY 7384910 YP_002553755.1 CDS Dtpsy_2318 NC_011992.1 2465172 2466332 R PFAM: Extracellular ligand-binding receptor; KEGG: ajs:Ajs_2829 extracellular ligand-binding receptor; Extracellular ligand-binding receptor complement(2465172..2466332) Acidovorax ebreus TPSY 7384911 YP_002553756.1 CDS Dtpsy_2319 NC_011992.1 2466493 2467113 D PFAM: ANTAR domain protein; KEGG: ajs:Ajs_2830 response regulator receiver/ANTAR domain-containing protein; response regulator receiver and ANTAR domain protein 2466493..2467113 Acidovorax ebreus TPSY 7384912 YP_002553757.1 CDS Dtpsy_2320 NC_011992.1 2467444 2468688 D KEGG: ajs:Ajs_2831 twin-arginine translocation pathway signal; twin-arginine translocation pathway signal 2467444..2468688 Acidovorax ebreus TPSY 7384913 YP_002553758.1 CDS Dtpsy_2321 NC_011992.1 2468723 2469664 D TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_2832 nitrate ABC transporter, inner membrane subunit; nitrate ABC transporter, inner membrane subunit 2468723..2469664 Acidovorax ebreus TPSY 7384914 YP_002553759.1 CDS Dtpsy_2322 NC_011992.1 2469661 2470464 D KEGG: ajs:Ajs_2833 nitrate ABC transporter, ATPase subunits C and D; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; SMART: AAA ATPase; nitrate ABC transporter, ATPase subunits C and D 2469661..2470464 Acidovorax ebreus TPSY 7384915 YP_002553760.1 CDS Dtpsy_2323 NC_011992.1 2470641 2471078 R PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: ajs:Ajs_2834 signal-transduction protein; putative signal transduction protein with CBS domains complement(2470641..2471078) Acidovorax ebreus TPSY 7383182 YP_002553761.1 CDS Dtpsy_2324 NC_011992.1 2471258 2471926 R PFAM: Calcium-binding EF-hand-containing protein; KEGG: ajs:Ajs_2835 hypothetical protein; Calcium-binding EF-hand-containing protein complement(2471258..2471926) Acidovorax ebreus TPSY 7383184 YP_002553762.1 CDS Dtpsy_2325 NC_011992.1 2472303 2473643 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: ajs:Ajs_2836 RND family efflux transporter MFP subunit; efflux transporter, RND family, MFP subunit 2472303..2473643 Acidovorax ebreus TPSY 7383185 YP_002553763.1 CDS Dtpsy_2326 NC_011992.1 2473662 2476829 D TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: ajs:Ajs_2837 hydrophobe/amphiphile efflux-1 (HAE1) family protein; transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2473662..2476829 Acidovorax ebreus TPSY 7383186 YP_002553764.1 CDS Dtpsy_2327 NC_011992.1 2476826 2478412 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: ajs:Ajs_2838 RND efflux system outer membrane lipoprotein; RND efflux system, outer membrane lipoprotein, NodT family 2476826..2478412 Acidovorax ebreus TPSY 7383187 YP_002553765.1 CDS Dtpsy_2328 NC_011992.1 2478901 2481366 D TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: ajs:Ajs_2839 assimilatory nitrite reductase (NAD(P)H) large subunit precursor; nitrite reductase (NAD(P)H), large subunit 2478901..2481366 Acidovorax ebreus TPSY 7383188 YP_002553766.1 CDS Dtpsy_2329 NC_011992.1 2481443 2481832 D TIGRFAM: nitrite reductase [NAD(P)H], small subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: ajs:Ajs_2840 assimilatory nitrite reductase (NAD(P)H) small subunit; nitrite reductase (NAD(P)H), small subunit 2481443..2481832 Acidovorax ebreus TPSY 7383189 YP_002553767.1 CDS Dtpsy_2330 NC_011992.1 2482203 2485061 D PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: ajs:Ajs_2841 assimilatory nitrate reductase (NADH) alpha subunit apoprotein; molybdopterin oxidoreductase 2482203..2485061 Acidovorax ebreus TPSY 7383190 YP_002553768.1 CDS Dtpsy_2331 NC_011992.1 2485155 2486084 D PFAM: Glycosyl transferase, family 3-like; KEGG: ajs:Ajs_2842 hypothetical protein; glycosyl transferase family protein 2485155..2486084 Acidovorax ebreus TPSY 7383191 YP_002553769.1 CDS Dtpsy_2332 NC_011992.1 2486081 2486890 D TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: ajs:Ajs_2843 uroporphyrinogen-III C-methyltransferase; uroporphyrin-III C-methyltransferase 2486081..2486890 Acidovorax ebreus TPSY 7383192 YP_002553770.1 CDS Dtpsy_2333 NC_011992.1 2486895 2487395 R PFAM: thioesterase superfamily protein; KEGG: ajs:Ajs_2844 thioesterase superfamily protein; thioesterase superfamily protein complement(2486895..2487395) Acidovorax ebreus TPSY 7383193 YP_002553771.1 CDS Dtpsy_2334 NC_011992.1 2487589 2488755 D PFAM: Extracellular ligand-binding receptor; KEGG: ajs:Ajs_2845 extracellular ligand-binding receptor; Extracellular ligand-binding receptor 2487589..2488755 Acidovorax ebreus TPSY 7383194 YP_002553772.1 CDS Dtpsy_2335 NC_011992.1 2488826 2490067 D PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; KEGG: ajs:Ajs_2846 hypothetical protein; HI0933 family protein 2488826..2490067 Acidovorax ebreus TPSY 7383195 YP_002553773.1 CDS Dtpsy_2336 NC_011992.1 2490170 2491375 D PFAM: NnrS family protein; KEGG: ajs:Ajs_2847 NnrS family protein; NnrS family protein 2490170..2491375 Acidovorax ebreus TPSY 7383196 YP_002553774.1 CDS Dtpsy_2337 NC_011992.1 2491444 2491743 D KEGG: ajs:Ajs_2848 hypothetical protein; hypothetical protein 2491444..2491743 Acidovorax ebreus TPSY 7383197 YP_002553775.1 CDS Dtpsy_2338 NC_011992.1 2491811 2492368 R TIGRFAM: FeS assembly SUF system protein SufT; PFAM: protein of unknown function DUF59; KEGG: ajs:Ajs_2849 hypothetical protein; FeS assembly SUF system protein SufT complement(2491811..2492368) Acidovorax ebreus TPSY 7383198 YP_002553776.1 CDS Dtpsy_2339 NC_011992.1 2492365 2492844 R TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; KEGG: ajs:Ajs_2850 NifU family SUF system FeS assembly protein; SUF system FeS assembly protein, NifU family complement(2492365..2492844) Acidovorax ebreus TPSY 7383199 YP_002553777.1 CDS Dtpsy_2340 NC_011992.1 2492841 2494106 R PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: ajs:Ajs_2851 aminotransferase, class V; aminotransferase class V complement(2492841..2494106) Acidovorax ebreus TPSY 7383200 YP_002553778.1 CDS Dtpsy_2341 NC_011992.1 2494099 2495346 R PFAM: SufBD protein; KEGG: ajs:Ajs_2852 SufBD protein; SufBD protein complement(2494099..2495346) Acidovorax ebreus TPSY 7383201 YP_002553779.1 CDS Dtpsy_2342 NC_011992.1 2495351 2496121 R KEGG: ajs:Ajs_2853 FeS assembly ATPase SufC; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase; FeS assembly ATPase SufC complement(2495351..2496121) Acidovorax ebreus TPSY 7383202 YP_002553780.1 CDS Dtpsy_2343 NC_011992.1 2496202 2497695 R with SufCD activates cysteine desulfurase SufS; cysteine desulfurase activator complex subunit SufB complement(2496202..2497695) Acidovorax ebreus TPSY 7383203 YP_002553781.1 CDS Dtpsy_2344 NC_011992.1 2497847 2498566 R PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: ajs:Ajs_2855 ArsR family transcriptional regulator; transcriptional regulator, ArsR family complement(2497847..2498566) Acidovorax ebreus TPSY 7383204 YP_002553782.1 CDS Dtpsy_2345 NC_011992.1 2498675 2499028 D PFAM: NIPSNAP family containing protein; KEGG: ajs:Ajs_2856 NIPSNAP family protein; NIPSNAP family containing protein 2498675..2499028 Acidovorax ebreus TPSY 7383205 YP_002553783.1 CDS Dtpsy_2346 NC_011992.1 2499025 2499429 D PFAM: Antibiotic biosynthesis monooxygenase; KEGG: ajs:Ajs_2857 antibiotic biosynthesis monooxygenase; Antibiotic biosynthesis monooxygenase 2499025..2499429 Acidovorax ebreus TPSY 7383206 YP_002553784.1 CDS rpsU NC_011992.1 2499559 2499771 D a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 2499559..2499771 Acidovorax ebreus TPSY 7383207 YP_002553785.1 CDS Dtpsy_2348 NC_011992.1 2499869 2500330 D KEGG: ajs:Ajs_2859 GatB/YqeY domain-containing protein; GatB/YqeY domain-containing protein 2499869..2500330 Acidovorax ebreus TPSY 7383208 YP_002553786.1 CDS Dtpsy_2349 NC_011992.1 2500669 2501763 D KEGG: ajs:Ajs_2860 tartrate dehydrogenase; TIGRFAM: tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; tartrate dehydrogenase 2500669..2501763 Acidovorax ebreus TPSY 7383209 YP_002553787.1 CDS Dtpsy_2350 NC_011992.1 2501967 2502239 D PFAM: protein of unknown function DUF156; KEGG: ajs:Ajs_2861 hypothetical protein; protein of unknown function DUF156 2501967..2502239 Acidovorax ebreus TPSY 7383210 YP_002553788.1 CDS Dtpsy_2351 NC_011992.1 2502236 2503213 D TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: ajs:Ajs_2862 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter 2502236..2503213 Acidovorax ebreus TPSY 7383211 YP_002553789.1 CDS Dtpsy_2352 NC_011992.1 2503225 2503869 D PFAM: protein of unknown function DUF938; KEGG: ajs:Ajs_2863 hypothetical protein; protein of unknown function DUF938 2503225..2503869 Acidovorax ebreus TPSY 7383212 YP_002553790.1 CDS Dtpsy_2353 NC_011992.1 2503895 2504326 D PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: ajs:Ajs_2864 glutathione-dependent formaldehyde-activating, GFA; glutathione-dependent formaldehyde-activating GFA 2503895..2504326 Acidovorax ebreus TPSY 7383213 YP_002553791.1 CDS Dtpsy_2354 NC_011992.1 2504430 2505305 D KEGG: ajs:Ajs_2867 glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu/hydantoin racemase; glutamate racemase 2504430..2505305 Acidovorax ebreus TPSY 7383214 YP_002553792.1 CDS Dtpsy_2355 NC_011992.1 2505373 2505891 R PFAM: protein of unknown function DUF45; KEGG: ajs:Ajs_2868 hypothetical protein; protein of unknown function DUF45 complement(2505373..2505891) Acidovorax ebreus TPSY 7383215 YP_002553793.1 CDS Dtpsy_2356 NC_011992.1 2505958 2506947 R PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_2869 hypothetical protein; hypothetical protein complement(2505958..2506947) Acidovorax ebreus TPSY 7383216 YP_002553794.1 CDS Dtpsy_2357 NC_011992.1 2506996 2507997 R PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_2870 hypothetical protein; hypothetical protein complement(2506996..2507997) Acidovorax ebreus TPSY 7383217 YP_002553795.1 CDS Dtpsy_2358 NC_011992.1 2508035 2509009 R PFAM: pyruvate carboxyltransferase; KEGG: ajs:Ajs_2871 hydroxymethylglutaryl-CoA lyase; pyruvate carboxyltransferase complement(2508035..2509009) Acidovorax ebreus TPSY 7383218 YP_002553796.1 CDS Dtpsy_2359 NC_011992.1 2509006 2510226 R PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: ajs:Ajs_2872 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F complement(2509006..2510226) Acidovorax ebreus TPSY 7383219 YP_002553797.1 CDS Dtpsy_2360 NC_011992.1 2510347 2511246 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_2873 LysR family transcriptional regulator; transcriptional regulator, LysR family 2510347..2511246 Acidovorax ebreus TPSY 7383220 YP_002553798.1 CDS Dtpsy_2361 NC_011992.1 2511243 2512355 D KEGG: ajs:Ajs_2874 hypothetical protein; hypothetical protein 2511243..2512355 Acidovorax ebreus TPSY 7383221 YP_002553799.1 CDS Dtpsy_2362 NC_011992.1 2512522 2513076 D Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 2512522..2513076 Acidovorax ebreus TPSY 7383222 YP_002553800.1 CDS Dtpsy_2363 NC_011992.1 2513191 2513658 R KEGG: ajs:Ajs_2876 hypothetical protein; hypothetical protein complement(2513191..2513658) Acidovorax ebreus TPSY 7383223 YP_002553801.1 CDS Dtpsy_2364 NC_011992.1 2513796 2515883 R TIGRFAM: Calcium-binding EF-hand-containing protein; PFAM: Na+/solute symporter; KEGG: ajs:Ajs_2877 Na+/solute symporter; Calcium-binding EF-hand-containing protein complement(2513796..2515883) Acidovorax ebreus TPSY 7383224 YP_002553802.1 CDS Dtpsy_2365 NC_011992.1 2515876 2516193 R KEGG: ajs:Ajs_2878 hypothetical protein; hypothetical protein complement(2515876..2516193) Acidovorax ebreus TPSY 7383225 YP_002553803.1 CDS Dtpsy_2366 NC_011992.1 2516214 2518604 R catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase complement(2516214..2518604) Acidovorax ebreus TPSY 7383226 YP_002553804.1 CDS Dtpsy_2367 NC_011992.1 2518828 2519658 D PFAM: protein of unknown function DUF299; KEGG: ajs:Ajs_2880 hypothetical protein; hypothetical protein 2518828..2519658 Acidovorax ebreus TPSY 7383227 YP_002553805.1 CDS Dtpsy_2368 NC_011992.1 2519759 2521315 R TIGRFAM: alkyl hydroperoxide reductase, F subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ajs:Ajs_2881 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; alkyl hydroperoxide reductase, F subunit complement(2519759..2521315) Acidovorax ebreus TPSY 7383228 YP_002553806.1 CDS Dtpsy_2369 NC_011992.1 2521421 2521984 R with AhpF catalyzes the conversion of alkyl hydroperoxides to their corresponding alcohols; AhpC reduced the hydroperoxide substrate; alkyl hydroperoxide reductase subunit C complement(2521421..2521984) Acidovorax ebreus TPSY 7383229 YP_002553807.1 CDS Dtpsy_2370 NC_011992.1 2522222 2522698 D TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein; KEGG: ajs:Ajs_2883 bacterioferritin; bacterioferritin 2522222..2522698 Acidovorax ebreus TPSY 7383230 YP_002553808.1 CDS Dtpsy_2371 NC_011992.1 2523002 2523331 D PFAM: flagellar transcriptional activator; KEGG: ajs:Ajs_2884 flagellar transcriptional activator, FlhD subunit; flagellar transcriptional activator 2523002..2523331 Acidovorax ebreus TPSY 7383231 YP_002553809.1 CDS Dtpsy_2372 NC_011992.1 2523372 2523911 D With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems; transcriptional activator FlhC 2523372..2523911 Acidovorax ebreus TPSY 7383232 YP_002553810.1 CDS Dtpsy_2373 NC_011992.1 2523993 2524547 R KEGG: ajs:Ajs_2886 hypothetical protein; hypothetical protein complement(2523993..2524547) Acidovorax ebreus TPSY 7383233 YP_002553811.1 CDS Dtpsy_2374 NC_011992.1 2524562 2525176 R KEGG: ajs:Ajs_2887 hypothetical protein; hypothetical protein complement(2524562..2525176) Acidovorax ebreus TPSY 7383234 YP_002553812.1 CDS Dtpsy_2375 NC_011992.1 2525274 2527457 R TIGRFAM: hypothetical protein; integral membrane protein, YccS/YhfK family; PFAM: protein of unknown function DUF893 YccS/YhfK; KEGG: ajs:Ajs_2888 YccS/YhfK family integral membrane protein; integral membrane protein, YccS/YhfK family complement(2525274..2527457) Acidovorax ebreus TPSY 7383235 YP_002553813.1 CDS Dtpsy_2376 NC_011992.1 2527467 2530316 R catalyzes the formation of oxaloacetate from phosphoenolpyruvate; phosphoenolpyruvate carboxylase complement(2527467..2530316) Acidovorax ebreus TPSY 7383236 YP_002553814.1 CDS hemC NC_011992.1 2530441 2531373 D transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 2530441..2531373 Acidovorax ebreus TPSY 7383237 YP_002553815.1 CDS Dtpsy_2378 NC_011992.1 2531376 2532194 D KEGG: ajs:Ajs_2891 uroporphyrinogen-III synthase; uroporphyrinogen-III synthase 2531376..2532194 Acidovorax ebreus TPSY 7383238 YP_002553816.1 CDS Dtpsy_2379 NC_011992.1 2532184 2533260 D PFAM: protein of unknown function DUF513 hemX; KEGG: ajs:Ajs_2892 protein of unknown function DUF513, HemX; protein of unknown function DUF513 hemX 2532184..2533260 Acidovorax ebreus TPSY 7383239 YP_002553817.1 CDS Dtpsy_2380 NC_011992.1 2533284 2534507 D KEGG: ajs:Ajs_2893 HemY domain-containing protein; HemY domain-containing protein 2533284..2534507 Acidovorax ebreus TPSY 7383240 YP_002553818.1 CDS Dtpsy_2381 NC_011992.1 2534686 2535306 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ajs:Ajs_2895 glyoxalase/bleomycin resistance protein/dioxygenase; Glyoxalase/bleomycin resistance protein/dioxygenase 2534686..2535306 Acidovorax ebreus TPSY 7383241 YP_002553819.1 CDS Dtpsy_2382 NC_011992.1 2535423 2538308 D TIGRFAM: valyl-tRNA synthetase; KEGG: ajs:Ajs_2896 valyl-tRNA synthetase; valyl-tRNA synthetase 2535423..2538308 Acidovorax ebreus TPSY 7383242 YP_002553820.1 CDS Dtpsy_2383 NC_011992.1 2538387 2539274 D TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: ajs:Ajs_2897 UDP-glucose pyrophosphorylase; UTP-glucose-1-phosphate uridylyltransferase 2538387..2539274 Acidovorax ebreus TPSY 7383243 YP_002553821.1 CDS Dtpsy_2384 NC_011992.1 2539385 2539612 R PFAM: SirA family protein; KEGG: ajs:Ajs_2898 SirA family protein; SirA family protein complement(2539385..2539612) Acidovorax ebreus TPSY 7383244 YP_002553822.1 CDS Dtpsy_2385 NC_011992.1 2539618 2540181 R PFAM: NUDIX hydrolase; KEGG: ajs:Ajs_2899 NUDIX hydrolase; NUDIX hydrolase complement(2539618..2540181) Acidovorax ebreus TPSY 7383245 YP_002553823.1 CDS cysM NC_011992.1 2540297 2541202 R catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; cysteine synthase B complement(2540297..2541202) Acidovorax ebreus TPSY 7383246 YP_002553824.1 CDS Dtpsy_2387 NC_011992.1 2541723 2541974 D KEGG: ajs:Ajs_2960 hypothetical protein; hypothetical protein 2541723..2541974 Acidovorax ebreus TPSY 7383248 YP_002553825.1 CDS infA NC_011992.1 2541998 2542258 D stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 2541998..2542258 Acidovorax ebreus TPSY 7383249 YP_002553826.1 CDS Dtpsy_2389 NC_011992.1 2542335 2542643 D PFAM: RNP-1 like RNA-binding protein; SMART: RNP-1 like RNA-binding protein; KEGG: ajs:Ajs_2962 RNP-1 like RNA-binding protein; RNP-1 like RNA-binding protein 2542335..2542643 Acidovorax ebreus TPSY 7383250 YP_002553827.1 CDS Dtpsy_2390 NC_011992.1 2542890 2543378 R KEGG: ajs:Ajs_2963 hypothetical protein; hypothetical protein complement(2542890..2543378) Acidovorax ebreus TPSY 7383251 YP_002553828.1 CDS Dtpsy_2391 NC_011992.1 2543382 2544164 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ajs:Ajs_2964 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(2543382..2544164) Acidovorax ebreus TPSY 7383252 YP_002553829.1 CDS Dtpsy_2392 NC_011992.1 2544176 2544712 R KEGG: ajs:Ajs_2965 putative lipoprotein; putative lipoprotein complement(2544176..2544712) Acidovorax ebreus TPSY 7383253 YP_002553830.1 CDS Dtpsy_2393 NC_011992.1 2544709 2546028 R KEGG: ajs:Ajs_2966 major facilitator superfamily transporter; major facilitator superfamily transporter complement(2544709..2546028) Acidovorax ebreus TPSY 7383254 YP_002553831.1 CDS Dtpsy_2394 NC_011992.1 2546025 2546621 R KEGG: ajs:Ajs_2967 hypothetical protein; hypothetical protein complement(2546025..2546621) Acidovorax ebreus TPSY 7383255 YP_002553832.1 CDS Dtpsy_2395 NC_011992.1 2546649 2548367 R PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: ajs:Ajs_2968 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(2546649..2548367) Acidovorax ebreus TPSY 7383256 YP_002553833.1 CDS Dtpsy_2396 NC_011992.1 2548401 2549621 R PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: ajs:Ajs_2969 cyclopropane-fatty-acyl-phospholipid synthase; Cyclopropane-fatty-acyl-phospholipid synthase complement(2548401..2549621) Acidovorax ebreus TPSY 7383257 YP_002553834.1 CDS Dtpsy_2397 NC_011992.1 2549624 2550442 R PFAM: protein of unknown function DUF1365; KEGG: ajs:Ajs_2970 hypothetical protein; protein of unknown function DUF1365 complement(2549624..2550442) Acidovorax ebreus TPSY 7383258 YP_002553835.1 CDS Dtpsy_2398 NC_011992.1 2550439 2551743 R PFAM: FAD dependent oxidoreductase; KEGG: ajs:Ajs_2971 FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(2550439..2551743) Acidovorax ebreus TPSY 7383259 YP_002553836.1 CDS Dtpsy_2399 NC_011992.1 2551912 2552862 D PFAM: regulatory protein MerR; cobalamin B12-binding domain protein; SMART: regulatory protein MerR; KEGG: ajs:Ajs_2972 MerR family transcriptional regulator; transcriptional regulator, MerR family 2551912..2552862 Acidovorax ebreus TPSY 7383260 YP_002553837.1 CDS Dtpsy_2400 NC_011992.1 2552888 2553496 D PFAM: Lipocalin family protein; KEGG: ajs:Ajs_2973 lipocalin family protein; Lipocalin family protein 2552888..2553496 Acidovorax ebreus TPSY 7383261 YP_002553838.1 CDS Dtpsy_2401 NC_011992.1 2553626 2553955 R KEGG: ajs:Ajs_2974 hypothetical protein; hypothetical protein complement(2553626..2553955) Acidovorax ebreus TPSY 7383262 YP_002553839.1 CDS Dtpsy_2402 NC_011992.1 2554080 2554211 R hypothetical protein complement(2554080..2554211) Acidovorax ebreus TPSY 7385078 YP_002553840.1 CDS Dtpsy_2403 NC_011992.1 2554825 2555052 R KEGG: ajs:Ajs_2975 hypothetical protein; hypothetical protein complement(2554825..2555052) Acidovorax ebreus TPSY 7383905 YP_002553841.1 CDS Dtpsy_2404 NC_011992.1 2555278 2555652 D PFAM: LrgA family protein; KEGG: ajs:Ajs_2976 LrgA family protein; LrgA family protein 2555278..2555652 Acidovorax ebreus TPSY 7383906 YP_002553842.1 CDS Dtpsy_2405 NC_011992.1 2555649 2556374 D PFAM: LrgB family protein; KEGG: ajs:Ajs_2977 LrgB family protein; LrgB family protein 2555649..2556374 Acidovorax ebreus TPSY 7383907 YP_002553843.1 CDS Dtpsy_2406 NC_011992.1 2556396 2557349 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_2978 LysR family transcriptional regulator; transcriptional regulator, LysR family complement(2556396..2557349) Acidovorax ebreus TPSY 7383908 YP_002553844.1 CDS Dtpsy_2407 NC_011992.1 2557515 2558711 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_2979 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase domain protein 2557515..2558711 Acidovorax ebreus TPSY 7383909 YP_002553845.1 CDS Dtpsy_2408 NC_011992.1 2558864 2560120 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: ajs:Ajs_2980 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 2558864..2560120 Acidovorax ebreus TPSY 7383910 YP_002553846.1 CDS Dtpsy_2409 NC_011992.1 2560211 2561179 D PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_2981 hypothetical protein; hypothetical protein 2560211..2561179 Acidovorax ebreus TPSY 7383911 YP_002553847.1 CDS Dtpsy_2411 NC_011992.1 2562342 2562941 D KEGG: ajs:Ajs_2984 hypothetical protein; hypothetical protein 2562342..2562941 Acidovorax ebreus TPSY 7383913 YP_002553848.1 CDS Dtpsy_2412 NC_011992.1 2562969 2563616 D KEGG: ajs:Ajs_2985 hypothetical protein; hypothetical protein 2562969..2563616 Acidovorax ebreus TPSY 7383914 YP_002553849.1 CDS Dtpsy_2413 NC_011992.1 2563613 2564569 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: ajs:Ajs_2986 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(2563613..2564569) Acidovorax ebreus TPSY 7383915 YP_002553850.1 CDS Dtpsy_2414 NC_011992.1 2564615 2565667 D catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose; CDP-6-deoxy-delta-3,4-glucoseen reductase 2564615..2565667 Acidovorax ebreus TPSY 7383916 YP_002553851.1 CDS Dtpsy_2415 NC_011992.1 2565855 2566205 R KEGG: ajs:Ajs_2988 hypothetical protein; hypothetical protein complement(2565855..2566205) Acidovorax ebreus TPSY 7383917 YP_002553852.1 CDS Dtpsy_2416 NC_011992.1 2566338 2567309 D PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_2989 hypothetical protein; hypothetical protein 2566338..2567309 Acidovorax ebreus TPSY 7383918 YP_002553853.1 CDS Dtpsy_2417 NC_011992.1 2567574 2568092 R KEGG: ajs:Ajs_2990 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase complement(2567574..2568092) Acidovorax ebreus TPSY 7383919 YP_002553854.1 CDS Dtpsy_2418 NC_011992.1 2568089 2569684 R KEGG: ajs:Ajs_2991 poly(A) polymerase; TIGRFAM: poly(A) polymerase; PFAM: Polynucleotide adenylyltransferase region; poly(A) polymerase complement(2568089..2569684) Acidovorax ebreus TPSY 7383920 YP_002553855.1 CDS Dtpsy_2419 NC_011992.1 2569681 2570382 R TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; KEGG: ajs:Ajs_2992 HAD family hydrolase; HAD-superfamily subfamily IB hydrolase, TIGR01490 complement(2569681..2570382) Acidovorax ebreus TPSY 7383921 YP_002553856.1 CDS Dtpsy_2420 NC_011992.1 2570433 2571125 R TIGRFAM: DnaA regulatory inactivator Hda; PFAM: Chromosomal replication initiator DnaA; KEGG: ajs:Ajs_2993 chromosomal replication initiator, DnaA; DnaA regulatory inactivator Hda complement(2570433..2571125) Acidovorax ebreus TPSY 7383922 YP_002553857.1 CDS Dtpsy_2421 NC_011992.1 2571462 2572511 D catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 2571462..2572511 Acidovorax ebreus TPSY 7383923 YP_002553858.1 CDS Dtpsy_2422 NC_011992.1 2572530 2573609 D KEGG: ajs:Ajs_2995 hypothetical protein; hypothetical protein 2572530..2573609 Acidovorax ebreus TPSY 7383924 YP_002553859.1 CDS Dtpsy_2423 NC_011992.1 2573833 2574225 D PFAM: UspA domain protein; KEGG: ajs:Ajs_2996 UspA domain-containing protein; UspA domain protein 2573833..2574225 Acidovorax ebreus TPSY 7383925 YP_002553860.1 CDS Dtpsy_2424 NC_011992.1 2574315 2575229 R PFAM: protein of unknown function DUF344; KEGG: ajs:Ajs_2997 hypothetical protein; protein of unknown function DUF344 complement(2574315..2575229) Acidovorax ebreus TPSY 7383926 YP_002553861.1 CDS Dtpsy_2425 NC_011992.1 2575337 2576185 R KEGG: ajs:Ajs_2998 hypothetical protein; hypothetical protein complement(2575337..2576185) Acidovorax ebreus TPSY 7383927 YP_002553862.1 CDS Dtpsy_2426 NC_011992.1 2576199 2577764 R TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; KEGG: ajs:Ajs_2999 integral membrane protein MviN; integral membrane protein MviN complement(2576199..2577764) Acidovorax ebreus TPSY 7383928 YP_002553863.1 CDS rpsT NC_011992.1 2577869 2578171 D binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 2577869..2578171 Acidovorax ebreus TPSY 7383929 YP_002553864.1 CDS Dtpsy_2428 NC_011992.1 2578350 2578664 R KEGG: ajs:Ajs_3001 hypothetical protein; hypothetical protein complement(2578350..2578664) Acidovorax ebreus TPSY 7383930 YP_002553865.1 CDS Dtpsy_2429 NC_011992.1 2578899 2580095 D catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine aminotransferase 2578899..2580095 Acidovorax ebreus TPSY 7383931 YP_002553866.1 CDS Dtpsy_2430 NC_011992.1 2580112 2581029 D catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 2580112..2581029 Acidovorax ebreus TPSY 7383932 YP_002553867.1 CDS Dtpsy_2431 NC_011992.1 2581050 2581223 D hypothetical protein 2581050..2581223 Acidovorax ebreus TPSY 7383933 YP_002553868.1 CDS Dtpsy_2432 NC_011992.1 2581367 2581717 D PFAM: protein of unknown function UPF0153; KEGG: ajs:Ajs_3004 hypothetical protein; protein of unknown function UPF0153 2581367..2581717 Acidovorax ebreus TPSY 7383934 YP_002553869.1 CDS Dtpsy_2433 NC_011992.1 2581849 2582046 R KEGG: ajs:Ajs_3005 hypothetical protein; hypothetical protein complement(2581849..2582046) Acidovorax ebreus TPSY 7383935 YP_002553870.1 CDS Dtpsy_2434 NC_011992.1 2582071 2583972 R TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; KEGG: aav:Aave_1161 ferrous iron transport protein B; ferrous iron transport protein B complement(2582071..2583972) Acidovorax ebreus TPSY 7383936 YP_002553871.1 CDS Dtpsy_2435 NC_011992.1 2583969 2584262 R PFAM: FeoA family protein; KEGG: aav:Aave_1160 FeoA family protein; FeoA family protein complement(2583969..2584262) Acidovorax ebreus TPSY 7383937 YP_002553872.1 CDS Dtpsy_2436 NC_011992.1 2584380 2584706 D PFAM: protein of unknown function UPF0153; KEGG: dac:Daci_2174 hypothetical protein; protein of unknown function UPF0153 2584380..2584706 Acidovorax ebreus TPSY 7383938 YP_002553873.1 CDS Dtpsy_2437 NC_011992.1 2584725 2585192 R PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: aav:Aave_1158 transcriptional regulator, AsnC family; transcriptional regulator, AsnC family complement(2584725..2585192) Acidovorax ebreus TPSY 7383939 YP_002553874.1 CDS Dtpsy_2438 NC_011992.1 2585287 2585958 D TIGRFAM: arylformamidase; PFAM: cyclase family protein; KEGG: aav:Aave_1157 cyclase family protein; arylformamidase 2585287..2585958 Acidovorax ebreus TPSY 7383940 YP_002553875.1 CDS Dtpsy_2439 NC_011992.1 2586032 2587345 D TIGRFAM: kynureninase; PFAM: aminotransferase class V; KEGG: dac:Daci_2164 kynureninase; kynureninase 2586032..2587345 Acidovorax ebreus TPSY 7383941 YP_002553876.1 CDS Dtpsy_2440 NC_011992.1 2587348 2588217 D TIGRFAM: tryptophan 2,3-dioxygenase; PFAM: tryptophan 23-dioxygenase; KEGG: aav:Aave_1155 tryptophan 2,3-dioxygenase; tryptophan 2,3-dioxygenase 2587348..2588217 Acidovorax ebreus TPSY 7383942 YP_002553877.1 CDS Dtpsy_2441 NC_011992.1 2588326 2590770 R PFAM: peptidase S45 penicillin amidase; KEGG: aav:Aave_1140 peptidase S45, penicillin amidase; peptidase S45 penicillin amidase complement(2588326..2590770) Acidovorax ebreus TPSY 7383943 YP_002553878.1 CDS Dtpsy_2442 NC_011992.1 2590894 2591946 R catalyzes the formation of inosine from adenosine; adenosine deaminase complement(2590894..2591946) Acidovorax ebreus TPSY 7383944 YP_002553879.1 CDS Dtpsy_2443 NC_011992.1 2592151 2593305 R PFAM: basic membrane lipoprotein; KEGG: aav:Aave_1135 basic membrane lipoprotein; basic membrane lipoprotein complement(2592151..2593305) Acidovorax ebreus TPSY 7383945 YP_002553880.1 CDS Dtpsy_2444 NC_011992.1 2593390 2594538 R PFAM: basic membrane lipoprotein; KEGG: dac:Daci_2138 basic membrane lipoprotein; basic membrane lipoprotein complement(2593390..2594538) Acidovorax ebreus TPSY 7383946 YP_002553881.1 CDS Dtpsy_2445 NC_011992.1 2594569 2595489 R PFAM: inner-membrane translocator; KEGG: dac:Daci_2137 inner-membrane translocator; inner-membrane translocator complement(2594569..2595489) Acidovorax ebreus TPSY 7383947 YP_002553882.1 CDS Dtpsy_2446 NC_011992.1 2595489 2596562 R PFAM: inner-membrane translocator; KEGG: aav:Aave_1133 inner-membrane translocator; inner-membrane translocator complement(2595489..2596562) Acidovorax ebreus TPSY 7383948 YP_002553883.1 CDS Dtpsy_2447 NC_011992.1 2596549 2598150 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_3101 ABC transporter related; ABC transporter related complement(2596549..2598150) Acidovorax ebreus TPSY 7383949 YP_002553884.1 CDS Dtpsy_2448 NC_011992.1 2598331 2599854 D TIGRFAM: xanthine dehydrogenase, small subunit; PFAM: ferredoxin; molybdopterin dehydrogenase FAD-binding; [2Fe-2S]-binding domain protein; CO dehydrogenase flavoprotein domain protein; KEGG: ajs:Ajs_3102 molybdopterin dehydrogenase, FAD-binding; xanthine dehydrogenase, small subunit 2598331..2599854 Acidovorax ebreus TPSY 7383950 YP_002553885.1 CDS Dtpsy_2449 NC_011992.1 2599851 2602256 D KEGG: ajs:Ajs_3103 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; TIGRFAM: xanthine dehydrogenase, molybdopterin binding subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; xanthine dehydrogenase, molybdopterin binding subunit 2599851..2602256 Acidovorax ebreus TPSY 7383951 YP_002553886.1 CDS Dtpsy_2450 NC_011992.1 2602292 2604394 R KEGG: ajs:Ajs_3104 diguanylate cyclase with PAS/PAC sensor; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: PAS domain containing protein; GGDEF domain containing protein; diguanylate cyclase with PAS/PAC sensor complement(2602292..2604394) Acidovorax ebreus TPSY 7383952 YP_002553887.1 CDS Dtpsy_2451 NC_011992.1 2604645 2605268 R PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp; KEGG: ajs:Ajs_3105 Crp/FNR family transcriptional regulator; transcriptional regulator, Crp/Fnr family complement(2604645..2605268) Acidovorax ebreus TPSY 7383953 YP_002553888.1 CDS Dtpsy_2452 NC_011992.1 2605524 2606546 D PFAM: porin Gram-negative type; KEGG: aav:Aave_1125 porin, gram-negative type; porin Gram-negative type 2605524..2606546 Acidovorax ebreus TPSY 7383954 YP_002553889.1 CDS Dtpsy_2453 NC_011992.1 2606770 2608671 D PFAM: GGDEF domain containing protein; EAL domain protein; SMART: GGDEF domain containing protein; EAL domain protein; KEGG: ajs:Ajs_3107 diguanylate cyclase/phosphodiesterase; diguanylate cyclase/phosphodiesterase 2606770..2608671 Acidovorax ebreus TPSY 7383955 YP_002553890.1 CDS Dtpsy_2454 NC_011992.1 2608755 2609192 D PFAM: histidine triad (HIT) protein; KEGG: ajs:Ajs_3108 histidine triad (HIT) protein; histidine triad (HIT) protein 2608755..2609192 Acidovorax ebreus TPSY 7383956 YP_002553891.1 CDS Dtpsy_2455 NC_011992.1 2609200 2610189 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: ajs:Ajs_3109 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding complement(2609200..2610189) Acidovorax ebreus TPSY 7383957 YP_002553892.1 CDS Dtpsy_2456 NC_011992.1 2610334 2611590 D TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_3110 Bcr/CflA subfamily drug resistance transporter; drug resistance transporter, Bcr/CflA subfamily 2610334..2611590 Acidovorax ebreus TPSY 7383958 YP_002553893.1 CDS Dtpsy_2457 NC_011992.1 2611580 2612551 D KEGG: ajs:Ajs_3111 tRNA delta(2)-isopentenylpyrophosphate transferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; tRNA delta(2)-isopentenylpyrophosphate transferase 2611580..2612551 Acidovorax ebreus TPSY 7383959 YP_002553894.1 CDS Dtpsy_2458 NC_011992.1 2612548 2613225 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_3112 ABC transporter related; ABC transporter related 2612548..2613225 Acidovorax ebreus TPSY 7383960 YP_002553895.1 CDS Dtpsy_2459 NC_011992.1 2613222 2613650 R PFAM: heat shock protein Hsp20; KEGG: ajs:Ajs_3113 heat shock protein HSP20; heat shock protein Hsp20 complement(2613222..2613650) Acidovorax ebreus TPSY 7383961 YP_002553896.1 CDS Dtpsy_2460 NC_011992.1 2613788 2616421 D PFAM: protein of unknown function DUF214; KEGG: ajs:Ajs_3114 hypothetical protein; protein of unknown function DUF214 2613788..2616421 Acidovorax ebreus TPSY 7383962 YP_002553897.1 CDS Dtpsy_2461 NC_011992.1 2616431 2617522 D PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: ajs:Ajs_3115 pyridoxal-5'-phosphate-dependent enzyme, beta subunit; Pyridoxal-5'-phosphate-dependent protein beta subunit 2616431..2617522 Acidovorax ebreus TPSY 7383963 YP_002553898.1 CDS Dtpsy_2462 NC_011992.1 2617522 2618664 D KEGG: ajs:Ajs_3116 secreted hydrolase-like protein; secreted hydrolase-like protein 2617522..2618664 Acidovorax ebreus TPSY 7383964 YP_002553899.1 CDS Dtpsy_2463 NC_011992.1 2618867 2619868 R PFAM: inner-membrane translocator; KEGG: ajs:Ajs_3117 inner-membrane translocator; inner-membrane translocator complement(2618867..2619868) Acidovorax ebreus TPSY 7383965 YP_002553900.1 CDS Dtpsy_2464 NC_011992.1 2619887 2620771 R PFAM: inner-membrane translocator; KEGG: aav:Aave_1284 inner-membrane translocator; inner-membrane translocator complement(2619887..2620771) Acidovorax ebreus TPSY 7383966 YP_002553901.1 CDS Dtpsy_2465 NC_011992.1 2620820 2622016 R PFAM: Extracellular ligand-binding receptor; KEGG: ajs:Ajs_3119 extracellular ligand-binding receptor; Extracellular ligand-binding receptor complement(2620820..2622016) Acidovorax ebreus TPSY 7383967 YP_002553902.1 CDS Dtpsy_2466 NC_011992.1 2622100 2623302 R PFAM: Extracellular ligand-binding receptor; KEGG: ajs:Ajs_3120 putative substrate-binding periplasmic (pbp) ABC transporter protein; Extracellular ligand-binding receptor complement(2622100..2623302) Acidovorax ebreus TPSY 7383968 YP_002553903.1 CDS Dtpsy_2467 NC_011992.1 2623347 2624060 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_3121 ABC transporter related; ABC transporter related complement(2623347..2624060) Acidovorax ebreus TPSY 7383969 YP_002553904.1 CDS Dtpsy_2468 NC_011992.1 2624062 2624832 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_3122 ABC transporter related; ABC transporter related complement(2624062..2624832) Acidovorax ebreus TPSY 7383970 YP_002553905.1 CDS Dtpsy_2469 NC_011992.1 2625005 2625790 R PFAM: regulatory protein LysR; TOBE domain protein; KEGG: ajs:Ajs_3123 ModE family transcriptional regulator; putative transcriptional regulator, ModE family complement(2625005..2625790) Acidovorax ebreus TPSY 7383971 YP_002553906.1 CDS Dtpsy_2470 NC_011992.1 2625910 2626671 D TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: ajs:Ajs_3124 molybdenum ABC transporter, periplasmic molybdate-binding protein; molybdenum ABC transporter, periplasmic molybdate-binding protein 2625910..2626671 Acidovorax ebreus TPSY 7383972 YP_002553907.1 CDS Dtpsy_2471 NC_011992.1 2626763 2627446 D TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_3125 molybdate ABC transporter, inner membrane subunit; molybdate ABC transporter, inner membrane subunit 2626763..2627446 Acidovorax ebreus TPSY 7383973 YP_002553908.1 CDS Dtpsy_2472 NC_011992.1 2627443 2628531 D KEGG: ajs:Ajs_3126 molybdate ABC transporter, ATPase subunit; TIGRFAM: molybdate ABC transporter, ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase; molybdate ABC transporter, ATPase subunit 2627443..2628531 Acidovorax ebreus TPSY 7383974 YP_002553909.1 CDS Dtpsy_2473 NC_011992.1 2628656 2629510 R TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: she:Shewmr4_0667 hypothetical protein; molybdenum ABC transporter, periplasmic molybdate-binding protein complement(2628656..2629510) Acidovorax ebreus TPSY 7383975 YP_002553910.1 CDS Dtpsy_2474 NC_011992.1 2629520 2630344 R PFAM: extracellular solute-binding protein family 1; KEGG: ajs:Ajs_3127 extracellular solute-binding protein; extracellular solute-binding protein family 1 complement(2629520..2630344) Acidovorax ebreus TPSY 7383976 YP_002553911.1 CDS Dtpsy_2475 NC_011992.1 2630341 2631117 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_3128 ABC transporter related; ABC transporter related complement(2630341..2631117) Acidovorax ebreus TPSY 7383977 YP_002553912.1 CDS Dtpsy_2476 NC_011992.1 2631114 2631842 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_3129 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component complement(2631114..2631842) Acidovorax ebreus TPSY 7383978 YP_002553913.1 CDS Dtpsy_2477 NC_011992.1 2631902 2633023 D PFAM: regulatory protein LysR; KEGG: ajs:Ajs_3130 molybdate metabolism transcriptional regulator; transcriptional regulator of molybdate metabolism, LysR family 2631902..2633023 Acidovorax ebreus TPSY 7383979 YP_002553914.1 CDS Dtpsy_2478 NC_011992.1 2633060 2635021 R PFAM: Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: ajs:Ajs_3131 TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP C4-dicarboxylate transport system permease DctM subunit complement(2633060..2635021) Acidovorax ebreus TPSY 7383980 YP_002553915.1 CDS Dtpsy_2479 NC_011992.1 2635018 2635638 R PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: ajs:Ajs_3132 tripartite ATP-independent periplasmic transporter DctQ; Tripartite ATP-independent periplasmic transporter DctQ component complement(2635018..2635638) Acidovorax ebreus TPSY 7383981 YP_002553916.1 CDS Dtpsy_2480 NC_011992.1 2635766 2636881 R PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: ajs:Ajs_3133 TRAP dicarboxylate transporter-DctP subunit; TRAP dicarboxylate transporter- DctP subunit complement(2635766..2636881) Acidovorax ebreus TPSY 7383982 YP_002553917.1 CDS Dtpsy_2481 NC_011992.1 2637314 2638366 D PFAM: Malate/L-lactate dehydrogenase; KEGG: ajs:Ajs_3134 delta1-piperideine 2-carboxylate reductase; Malate/L-lactate dehydrogenase 2637314..2638366 Acidovorax ebreus TPSY 7383983 YP_002553918.1 CDS Dtpsy_2482 NC_011992.1 2638461 2639678 R TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_3135 Bcr/CflA subfamily drug resistance transporter; drug resistance transporter, Bcr/CflA subfamily complement(2638461..2639678) Acidovorax ebreus TPSY 7383984 YP_002553919.1 CDS Dtpsy_2483 NC_011992.1 2639735 2641381 R PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_3136 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(2639735..2641381) Acidovorax ebreus TPSY 7383985 YP_002553920.1 CDS Dtpsy_2484 NC_011992.1 2641463 2643439 D KEGG: ajs:Ajs_3137 DNA primase; TIGRFAM: DNA primase; PFAM: zinc finger CHC2-family protein; TOPRIM domain protein; DNA primase catalytic core domain; SMART: zinc finger CHC2-family protein; Toprim sub domain protein; DNA primase 2641463..2643439 Acidovorax ebreus TPSY 7384754 YP_002553921.1 CDS Dtpsy_2485 NC_011992.1 2643711 2646116 D TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 1.1 domain protein; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 non-essential domain protein; sigma-70 region 1.2; KEGG: ajs:Ajs_3138 RpoD family RNA polymerase sigma factor; RNA polymerase, sigma 70 subunit, RpoD 2643711..2646116 Acidovorax ebreus TPSY 7384755 YP_002553922.1 CDS Dtpsy_2486 NC_011992.1 2646321 2647280 D TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE domain protein; KEGG: ajs:Ajs_3139 2-dehydropantoate 2-reductase; 2-dehydropantoate 2-reductase 2646321..2647280 Acidovorax ebreus TPSY 7384756 YP_002553923.1 CDS Dtpsy_2487 NC_011992.1 2647445 2647903 D KEGG: ajs:Ajs_3140 putative protein-S-isoprenylcysteine methyltransferase-like protein; putative protein-S-isoprenylcysteine methyltransferase-like protein 2647445..2647903 Acidovorax ebreus TPSY 7384757 YP_002553924.1 CDS Dtpsy_2488 NC_011992.1 2647948 2648949 R PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_3141 hypothetical protein; hypothetical protein complement(2647948..2648949) Acidovorax ebreus TPSY 7384758 YP_002553925.1 CDS Dtpsy_2489 NC_011992.1 2649046 2650254 R PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: ajs:Ajs_3142 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F complement(2649046..2650254) Acidovorax ebreus TPSY 7384759 YP_002553926.1 CDS Dtpsy_2490 NC_011992.1 2650292 2651263 R PFAM: pyruvate carboxyltransferase; KEGG: ajs:Ajs_3143 hydroxymethylglutaryl-CoA lyase; pyruvate carboxyltransferase complement(2650292..2651263) Acidovorax ebreus TPSY 7384760 YP_002553927.1 CDS Dtpsy_2491 NC_011992.1 2651375 2652277 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_3144 LysR family transcriptional regulator; transcriptional regulator, LysR family 2651375..2652277 Acidovorax ebreus TPSY 7384761 YP_002553928.1 CDS Dtpsy_2492 NC_011992.1 2652452 2652757 D KEGG: ajs:Ajs_3145 putative transcriptional regulator; putative transcriptional regulator 2652452..2652757 Acidovorax ebreus TPSY 7384762 YP_002553929.1 CDS Dtpsy_2493 NC_011992.1 2652886 2653245 D PFAM: peptidylprolyl isomerase FKBP-type; KEGG: ajs:Ajs_3146 peptidylprolyl isomerase; Peptidylprolyl isomerase 2652886..2653245 Acidovorax ebreus TPSY 7384763 YP_002553930.1 CDS rimO NC_011992.1 2653341 2654732 R catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit; ribosomal protein S12 methylthiotransferase complement(2653341..2654732) Acidovorax ebreus TPSY 7384764 YP_002553931.1 CDS Dtpsy_2495 NC_011992.1 2654760 2655329 R TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR; PFAM: PHB accumulation regulatory domain protein; PHA accumulation regulator DNA-binding protein; KEGG: ajs:Ajs_3148 polyhydroxyalkonate synthesis repressor, PhaR; polyhydroxyalkonate synthesis repressor, PhaR complement(2654760..2655329) Acidovorax ebreus TPSY 7384765 YP_002553932.1 CDS Dtpsy_2496 NC_011992.1 2655666 2657909 R KEGG: ajs:Ajs_3149 (p)ppGpp synthetase I, SpoT/RelA; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; RelA/SpoT domain protein; (p)ppGpp synthetase I, SpoT/RelA complement(2655666..2657909) Acidovorax ebreus TPSY 7384767 YP_002553933.1 CDS Dtpsy_2497 NC_011992.1 2657906 2658841 R PFAM: alpha/beta hydrolase fold; KEGG: ajs:Ajs_3150 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(2657906..2658841) Acidovorax ebreus TPSY 7384768 YP_002553934.1 CDS Dtpsy_2498 NC_011992.1 2658911 2659693 D catalyzes the formation of acetoacetate from 3-hydroxybutyrate; 3-hydroxybutyrate dehydrogenase 2658911..2659693 Acidovorax ebreus TPSY 7384769 YP_002553935.1 CDS Dtpsy_2499 NC_011992.1 2659773 2660486 R PFAM: protein of unknown function DUF541; KEGG: ajs:Ajs_3152 hypothetical protein; protein of unknown function DUF541 complement(2659773..2660486) Acidovorax ebreus TPSY 7384770 YP_002553936.1 CDS ompR NC_011992.1 2660707 2661438 D part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation; osmolarity response regulator 2660707..2661438 Acidovorax ebreus TPSY 7384771 YP_002553937.1 CDS Dtpsy_2501 NC_011992.1 2661522 2663027 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ajs:Ajs_3154 integral membrane sensor signal transduction histidine kinase; histidine kinase 2661522..2663027 Acidovorax ebreus TPSY 7384772 YP_002553938.1 CDS Dtpsy_2502 NC_011992.1 2663103 2663606 R KEGG: ajs:Ajs_3155 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase complement(2663103..2663606) Acidovorax ebreus TPSY 7384773 YP_002553939.1 CDS Dtpsy_2503 NC_011992.1 2663603 2664442 R TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: ajs:Ajs_3156 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase complement(2663603..2664442) Acidovorax ebreus TPSY 7384774 YP_002553940.1 CDS Dtpsy_2504 NC_011992.1 2664544 2668047 D KEGG: ajs:Ajs_3157 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: helicase domain protein; DEAD-like helicases; transcription-repair coupling factor 2664544..2668047 Acidovorax ebreus TPSY 7384775 YP_002553941.1 CDS Dtpsy_2505 NC_011992.1 2668056 2668730 D KEGG: ajs:Ajs_3158 hypothetical protein; hypothetical protein 2668056..2668730 Acidovorax ebreus TPSY 7384776 YP_002553942.1 CDS Dtpsy_2506 NC_011992.1 2668770 2669486 D KEGG: ajs:Ajs_3159 phosphoserine phosphatase; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase subfamily IB hypothetical 1; Haloacid dehalogenase domain protein hydrolase type 3; phosphoserine phosphatase SerB 2668770..2669486 Acidovorax ebreus TPSY 7384777 YP_002553943.1 CDS Dtpsy_2507 NC_011992.1 2669724 2670509 D TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: ajs:Ajs_3160 YaeC family lipoprotein; lipoprotein, YaeC family 2669724..2670509 Acidovorax ebreus TPSY 7384778 YP_002553944.1 CDS Dtpsy_2508 NC_011992.1 2670583 2671218 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: ajs:Ajs_3161 lysine exporter protein LysE/YggA; Lysine exporter protein (LYSE/YGGA) complement(2670583..2671218) Acidovorax ebreus TPSY 7384779 YP_002553945.1 CDS Dtpsy_2509 NC_011992.1 2671289 2672200 D specific inhibitor of chromosomal initiation of replication in vitro; inds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; chromosome replication initiation inhibitor protein 2671289..2672200 Acidovorax ebreus TPSY 7384780 YP_002553946.1 CDS Dtpsy_2510 NC_011992.1 2672254 2672754 R TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: ajs:Ajs_3163 BadM/Rrf2 family transcriptional regulator; transcriptional regulator, BadM/Rrf2 family complement(2672254..2672754) Acidovorax ebreus TPSY 7384781 YP_002553947.1 CDS Dtpsy_2511 NC_011992.1 2672844 2673566 D TIGRFAM: Hemerythrin HHE cation binding domain protein; PFAM: protein of unknown function DUF542 ScdA domain protein; Hemerythrin HHE cation binding domain protein; KEGG: ajs:Ajs_3164 hypothetical protein; Hemerythrin HHE cation binding domain protein 2672844..2673566 Acidovorax ebreus TPSY 7384782 YP_002553948.1 CDS Dtpsy_2512 NC_011992.1 2673680 2673931 R KEGG: ajs:Ajs_3165 hypothetical protein; hypothetical protein complement(2673680..2673931) Acidovorax ebreus TPSY 7384783 YP_002553949.1 CDS Dtpsy_2513 NC_011992.1 2673931 2674377 R KEGG: ajs:Ajs_3166 hypothetical protein; hypothetical protein complement(2673931..2674377) Acidovorax ebreus TPSY 7384784 YP_002553950.1 CDS Dtpsy_2514 NC_011992.1 2674396 2675397 R PFAM: aldo/keto reductase; KEGG: ajs:Ajs_3167 aldo/keto reductase; aldo/keto reductase complement(2674396..2675397) Acidovorax ebreus TPSY 7384785 YP_002553951.1 CDS Dtpsy_2515 NC_011992.1 2675474 2675689 R PFAM: SlyX family protein; KEGG: ajs:Ajs_3168 SlyX family protein; SlyX family protein complement(2675474..2675689) Acidovorax ebreus TPSY 7384786 YP_002553952.1 CDS Dtpsy_2516 NC_011992.1 2675695 2676897 R PFAM: aminotransferase class I and II; KEGG: ajs:Ajs_3169 GntR family transcriptional regulator; putative transcriptional regulator, GntR family complement(2675695..2676897) Acidovorax ebreus TPSY 7384787 YP_002553953.1 CDS Dtpsy_2517 NC_011992.1 2677002 2677652 D KEGG: ajs:Ajs_3170 endonuclease III / DNA-(apurinic or apyrimidinic site) lyase; TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; Endonuclease III/Nth; SMART: HhH-GPD family protein; iron-sulfur cluster loop; endonuclease III 2677002..2677652 Acidovorax ebreus TPSY 7384788 YP_002553954.1 CDS Dtpsy_2518 NC_011992.1 2677690 2678517 R KEGG: ajs:Ajs_3171 hypothetical protein; hypothetical protein complement(2677690..2678517) Acidovorax ebreus TPSY 7384789 YP_002553955.1 CDS Dtpsy_2519 NC_011992.1 2678538 2680271 R KEGG: ajs:Ajs_3172 hypothetical protein; hypothetical protein complement(2678538..2680271) Acidovorax ebreus TPSY 7384790 YP_002553956.1 CDS Dtpsy_2521 NC_011992.1 2682172 2682510 D PFAM: transposase IS3/IS911 family protein; KEGG: pna:Pnap_4707 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 2682172..2682510 Acidovorax ebreus TPSY 7384792 YP_002553957.1 CDS Dtpsy_2522 NC_011992.1 2682507 2682839 D PFAM: IS66 Orf2 family protein; KEGG: aav:Aave_0711 IS66 Orf2 family protein; IS66 Orf2 family protein 2682507..2682839 Acidovorax ebreus TPSY 7384793 YP_002553958.1 CDS Dtpsy_2523 NC_011992.1 2682920 2684473 D PFAM: transposase IS66; KEGG: rfr:Rfer_3059 transposase IS66; transposase IS66 2682920..2684473 Acidovorax ebreus TPSY 7384794 YP_002553959.1 CDS nfrB NC_011992.1 2685685 2687895 R PFAM: General secretory system II protein E domain protein; KEGG: ecg:E2348_C_0469 bacteriophage N4 receptor, inner membrane subunit NfrB; bacteriophage N4 adsorption protein B complement(2685685..2687895) Acidovorax ebreus TPSY 7384795 YP_002553960.1 CDS Dtpsy_2525 NC_011992.1 2687924 2688982 D KEGG: rpi:Rpic_2762 ISXo7 transposase; ISXo7 transposase 2687924..2688982 Acidovorax ebreus TPSY 7384796 YP_002553961.1 CDS Dtpsy_2526 NC_011992.1 2689043 2690209 R KEGG: syn:slr0624 UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase complement(2689043..2690209) Acidovorax ebreus TPSY 7384797 YP_002553962.1 CDS Dtpsy_2527 NC_011992.1 2690487 2691545 R KEGG: ajs:Ajs_3176 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase complement(2690487..2691545) Acidovorax ebreus TPSY 7384798 YP_002553963.1 CDS Dtpsy_2528 NC_011992.1 2691650 2692411 R TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase; KEGG: ajs:Ajs_3177 cob(II)yrinic acid a,c-diamide reductase; cob(II)yrinic acid a,c-diamide reductase complement(2691650..2692411) Acidovorax ebreus TPSY 7384799 YP_002553964.1 CDS Dtpsy_2529 NC_011992.1 2692668 2694158 R TIGRFAM: cobyric acid synthase CobQ; PFAM: Cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: ajs:Ajs_3178 adenosylcobyric acid synthase (glutamine-hydrolysing); cobyric acid synthase CobQ complement(2692668..2694158) Acidovorax ebreus TPSY 7384800 YP_002553965.1 CDS Dtpsy_2530 NC_011992.1 2694155 2694565 R KEGG: aav:Aave_1550 hypothetical protein; hypothetical protein complement(2694155..2694565) Acidovorax ebreus TPSY 7384801 YP_002553966.1 CDS Dtpsy_2531 NC_011992.1 2694552 2695361 R KEGG: aav:Aave_1549 hypothetical protein; hypothetical protein complement(2694552..2695361) Acidovorax ebreus TPSY 7384802 YP_002553967.1 CDS Dtpsy_2532 NC_011992.1 2695358 2696368 R PFAM: aminotransferase class I and II; KEGG: ajs:Ajs_3179 aminotransferase; aminotransferase class I and II complement(2695358..2696368) Acidovorax ebreus TPSY 7384803 YP_002553968.1 CDS Dtpsy_2533 NC_011992.1 2696365 2697351 R TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; KEGG: ajs:Ajs_3180 adenosylcobinamide-phosphate synthase; cobalamin biosynthesis protein CobD complement(2696365..2697351) Acidovorax ebreus TPSY 7384804 YP_002553969.1 CDS Dtpsy_2534 NC_011992.1 2697552 2698109 D KEGG: dac:Daci_5193 N-terminal methylation site-containing protein; N-terminal methylation site-containing protein 2697552..2698109 Acidovorax ebreus TPSY 7384805 YP_002553970.1 CDS Dtpsy_2535 NC_011992.1 2698123 2698704 D KEGG: ajs:Ajs_3182 putative type-4 fimbrial pilin related signal peptide protein; putative type-4 fimbrial pilin related signal peptide protein 2698123..2698704 Acidovorax ebreus TPSY 7384806 YP_002553971.1 CDS Dtpsy_2536 NC_011992.1 2698689 2699402 D TIGRFAM: type IV pilus modification protein PilV; KEGG: ajs:Ajs_3183 type IV pilus modification protein PilV; type IV pilus modification protein PilV 2698689..2699402 Acidovorax ebreus TPSY 7384807 YP_002553972.1 CDS Dtpsy_2537 NC_011992.1 2699440 2700351 D KEGG: ajs:Ajs_3186 hypothetical protein; hypothetical protein 2699440..2700351 Acidovorax ebreus TPSY 7384808 YP_002553973.1 CDS Dtpsy_2538 NC_011992.1 2700372 2701133 D KEGG: ajs:Ajs_3187 hypothetical protein; hypothetical protein 2700372..2701133 Acidovorax ebreus TPSY 7384809 YP_002553974.1 CDS Dtpsy_2539 NC_011992.1 2701216 2704833 D KEGG: ajs:Ajs_3188 type 4 fimbrial biogenesis protein PilY1; type 4 fimbrial biogenesis protein PilY1 2701216..2704833 Acidovorax ebreus TPSY 7384810 YP_002553975.1 CDS Dtpsy_2540 NC_011992.1 2704950 2705372 D KEGG: dac:Daci_5198 fimbrial protein pilin; fimbrial protein pilin 2704950..2705372 Acidovorax ebreus TPSY 7384811 YP_002553976.1 CDS Dtpsy_2541 NC_011992.1 2705429 2706013 D PFAM: protein of unknown function DUF820; KEGG: ana:all1618 hypothetical protein; protein of unknown function DUF820 2705429..2706013 Acidovorax ebreus TPSY 7384812 YP_002553977.1 CDS Dtpsy_2542 NC_011992.1 2706047 2707159 D KEGG: ajs:Ajs_3190 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein; riboflavin biosynthesis protein RibD 2706047..2707159 Acidovorax ebreus TPSY 7384813 YP_002553978.1 CDS Dtpsy_2543 NC_011992.1 2707291 2708994 D PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase; KEGG: ajs:Ajs_3191 phospholipase D/transphosphatidylase; phospholipase D/Transphosphatidylase 2707291..2708994 Acidovorax ebreus TPSY 7384814 YP_002553979.1 CDS Dtpsy_2544 NC_011992.1 2708954 2709970 R PFAM: dihydrouridine synthase DuS; KEGG: ajs:Ajs_3192 dihydrouridine synthase, DuS; dihydrouridine synthase DuS complement(2708954..2709970) Acidovorax ebreus TPSY 7384815 YP_002553980.1 CDS Dtpsy_2545 NC_011992.1 2710065 2711237 R PFAM: methyltransferase small; KEGG: ajs:Ajs_3193 methyltransferase small; methyltransferase small complement(2710065..2711237) Acidovorax ebreus TPSY 7384816 YP_002553981.1 CDS Dtpsy_2546 NC_011992.1 2711246 2711767 R PFAM: GCN5-related N-acetyltransferase; KEGG: ajs:Ajs_3194 GCN5-related N-acetyltransferase; GCN5-related N-acetyltransferase complement(2711246..2711767) Acidovorax ebreus TPSY 7384817 YP_002553982.1 CDS Dtpsy_2547 NC_011992.1 2711923 2713368 R PFAM: Aldehyde Dehydrogenase; KEGG: ajs:Ajs_3195 aldehyde dehydrogenase; Aldehyde Dehydrogenase complement(2711923..2713368) Acidovorax ebreus TPSY 7384818 YP_002553983.1 CDS Dtpsy_2548 NC_011992.1 2713475 2713879 D PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: ajs:Ajs_3196 glutathione-dependent formaldehyde-activating, GFA; glutathione-dependent formaldehyde-activating GFA 2713475..2713879 Acidovorax ebreus TPSY 7384819 YP_002553984.1 CDS Dtpsy_2549 NC_011992.1 2713963 2714268 R KEGG: ajs:Ajs_3197 hypothetical protein; hypothetical protein complement(2713963..2714268) Acidovorax ebreus TPSY 7384820 YP_002553985.1 CDS Dtpsy_2550 NC_011992.1 2714333 2716936 R KEGG: ajs:Ajs_3198 ATPase; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; ATP-dependent chaperone ClpB; SMART: AAA ATPase; ATP-dependent chaperone ClpB complement(2714333..2716936) Acidovorax ebreus TPSY 7384821 YP_002553986.1 CDS Dtpsy_2551 NC_011992.1 2717005 2717481 R PFAM: molybdopterin biosynthesis MoaE protein; KEGG: ajs:Ajs_3199 molybdopterin synthase subunit MoaE; molybdopterin biosynthesis MoaE protein complement(2717005..2717481) Acidovorax ebreus TPSY 7384822 YP_002553987.1 CDS Dtpsy_2552 NC_011992.1 2717550 2717804 D KEGG: ajs:Ajs_3200 hypothetical protein; hypothetical protein 2717550..2717804 Acidovorax ebreus TPSY 7384823 YP_002553988.1 CDS Dtpsy_2553 NC_011992.1 2717917 2718057 D hypothetical protein 2717917..2718057 Acidovorax ebreus TPSY 7384824 YP_002553989.1 CDS Dtpsy_2554 NC_011992.1 2718136 2718465 D KEGG: ajs:Ajs_3201 hypothetical protein; hypothetical protein 2718136..2718465 Acidovorax ebreus TPSY 7384825 YP_002553990.1 CDS Dtpsy_2555 NC_011992.1 2718472 2718735 R TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; KEGG: ajs:Ajs_3202 molybdopterin synthase subunit MoaD; molybdopterin converting factor, subunit 1 complement(2718472..2718735) Acidovorax ebreus TPSY 7384826 YP_002553991.1 CDS Dtpsy_2556 NC_011992.1 2718732 2719976 R TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: ajs:Ajs_3203 molybdenum cofactor synthesis domain-containing protein; molybdenum cofactor synthesis domain protein complement(2718732..2719976) Acidovorax ebreus TPSY 7384827 YP_002553992.1 CDS Dtpsy_2557 NC_011992.1 2719973 2720524 R TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: ajs:Ajs_3204 molybdopterin-guanine dinucleotide biosynthesis protein B; molybdopterin-guanine dinucleotide biosynthesis protein B complement(2719973..2720524) Acidovorax ebreus TPSY 7384828 YP_002553993.1 CDS Dtpsy_2558 NC_011992.1 2720604 2722034 R catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase complement(2720604..2722034) Acidovorax ebreus TPSY 7384829 YP_002553994.1 CDS Dtpsy_2559 NC_011992.1 2722050 2723411 R catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase complement(2722050..2723411) Acidovorax ebreus TPSY 7384830 YP_002553995.1 CDS Dtpsy_2560 NC_011992.1 2723482 2724714 R broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; aminotransferase AlaT complement(2723482..2724714) Acidovorax ebreus TPSY 7384831 YP_002553996.1 CDS Dtpsy_2561 NC_011992.1 2724867 2725241 D PFAM: protein of unknown function DUF498; KEGG: ajs:Ajs_3208 hypothetical protein; protein of unknown function DUF498 2724867..2725241 Acidovorax ebreus TPSY 7384832 YP_002553997.1 CDS Dtpsy_2562 NC_011992.1 2725407 2725895 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: ajs:Ajs_3209 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 2725407..2725895 Acidovorax ebreus TPSY 7384833 YP_002553998.1 CDS Dtpsy_2563 NC_011992.1 2726051 2727814 D PFAM: PhoH family protein; SMART: Nucleotide binding protein PINc; KEGG: ajs:Ajs_3210 PhoH family protein; PhoH family protein 2726051..2727814 Acidovorax ebreus TPSY 7384834 YP_002553999.1 CDS Dtpsy_2564 NC_011992.1 2727814 2728179 D KEGG: ajs:Ajs_3211 hypothetical protein; hypothetical protein 2727814..2728179 Acidovorax ebreus TPSY 7384233 YP_002554000.1 CDS Dtpsy_2565 NC_011992.1 2728251 2729669 R KEGG: ajs:Ajs_3212 primary replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase; replicative DNA helicase complement(2728251..2729669) Acidovorax ebreus TPSY 7384234 YP_002554001.1 CDS rplI NC_011992.1 2729851 2730303 R in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 complement(2729851..2730303) Acidovorax ebreus TPSY 7384235 YP_002554002.1 CDS rpsR NC_011992.1 2730318 2730599 R binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 complement(2730318..2730599) Acidovorax ebreus TPSY 7384236 YP_002554003.1 CDS Dtpsy_2568 NC_011992.1 2730618 2730908 R KEGG: ajs:Ajs_3215 putative primosomal replication protein; putative primosomal replication protein complement(2730618..2730908) Acidovorax ebreus TPSY 7384237 YP_002554004.1 CDS rpsF NC_011992.1 2730934 2731311 R binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 complement(2730934..2731311) Acidovorax ebreus TPSY 7384238 YP_002554005.1 CDS Dtpsy_2570 NC_011992.1 2731551 2732087 D with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE 2731551..2732087 Acidovorax ebreus TPSY 7384239 YP_002554006.1 CDS dnaK NC_011992.1 2732175 2734115 D heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 2732175..2734115 Acidovorax ebreus TPSY 7384240 YP_002554007.1 CDS Dtpsy_2572 NC_011992.1 2734211 2735341 D chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ 2734211..2735341 Acidovorax ebreus TPSY 7384241 YP_002554008.1 CDS Dtpsy_2573 NC_011992.1 2735532 2736578 D PFAM: peptidase U32; KEGG: ajs:Ajs_3220 peptidase U32; peptidase U32 2735532..2736578 Acidovorax ebreus TPSY 7384242 YP_002554009.1 CDS Dtpsy_2574 NC_011992.1 2736688 2737590 D PFAM: peptidase U32; KEGG: ajs:Ajs_3221 peptidase U32; peptidase U32 2736688..2737590 Acidovorax ebreus TPSY 7384243 YP_002554010.1 CDS Dtpsy_2575 NC_011992.1 2737616 2738134 D PFAM: Sterol-binding domain protein; KEGG: ajs:Ajs_3222 hypothetical protein; Sterol-binding domain protein 2737616..2738134 Acidovorax ebreus TPSY 7384244 YP_002554011.1 CDS Dtpsy_2576 NC_011992.1 2738131 2738529 D PFAM: DGC domain protein; KEGG: ajs:Ajs_3223 hypothetical protein; DGC domain protein 2738131..2738529 Acidovorax ebreus TPSY 7384245 YP_002554012.1 CDS Dtpsy_2577 NC_011992.1 2738526 2739113 D TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; KEGG: ajs:Ajs_3224 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 2738526..2739113 Acidovorax ebreus TPSY 7384246 YP_002554013.1 CDS Dtpsy_2578 NC_011992.1 2739170 2740654 D TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; KEGG: ajs:Ajs_3225 3-octaprenyl-4hydroxybenzoate decarboxylase; UbiD family decarboxylase 2739170..2740654 Acidovorax ebreus TPSY 7384247 YP_002554014.1 CDS Dtpsy_2579 NC_011992.1 2740718 2741878 D PFAM: cytochrome P450; KEGG: ajs:Ajs_3226 cytochrome P450; cytochrome P450 2740718..2741878 Acidovorax ebreus TPSY 7384248 YP_002554015.1 CDS Dtpsy_2580 NC_011992.1 2741923 2743287 D PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: ajs:Ajs_3227 beta-lactamase domain-containing protein; beta-lactamase domain protein 2741923..2743287 Acidovorax ebreus TPSY 7384249 YP_002554016.1 CDS Dtpsy_2581 NC_011992.1 2743475 2744413 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_3228 LysR family transcriptional regulator; transcriptional regulator, LysR family 2743475..2744413 Acidovorax ebreus TPSY 7384250 YP_002554017.1 CDS Dtpsy_2582 NC_011992.1 2744454 2745875 D dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 2744454..2745875 Acidovorax ebreus TPSY 7384251 YP_002554018.1 CDS Dtpsy_2583 NC_011992.1 2745889 2746011 D PFAM: Entericidin EcnAB; KEGG: ajs:Ajs_3230 entericidin EcnAB; Entericidin EcnAB 2745889..2746011 Acidovorax ebreus TPSY 7384252 YP_002554019.1 CDS Dtpsy_2584 NC_011992.1 2746044 2746451 D KEGG: ajs:Ajs_3231 hypothetical protein; hypothetical protein 2746044..2746451 Acidovorax ebreus TPSY 7384253 YP_002554020.1 CDS leuD NC_011992.1 2746493 2747143 D catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 2746493..2747143 Acidovorax ebreus TPSY 7384254 YP_002554021.1 CDS Dtpsy_2586 NC_011992.1 2747234 2748313 D catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 2747234..2748313 Acidovorax ebreus TPSY 7384255 YP_002554022.1 CDS Dtpsy_2587 NC_011992.1 2748477 2749250 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ajs:Ajs_3234 short chain dehydrogenase; short chain dehydrogenase 2748477..2749250 Acidovorax ebreus TPSY 7384256 YP_002554023.1 CDS Dtpsy_2588 NC_011992.1 2749530 2750660 D catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 2749530..2750660 Acidovorax ebreus TPSY 7384257 YP_002554024.1 CDS Dtpsy_2589 NC_011992.1 2750929 2753586 D KEGG: ajs:Ajs_3236 putative transmembrane protein; putative transmembrane protein 2750929..2753586 Acidovorax ebreus TPSY 7384258 YP_002554025.1 CDS truA NC_011992.1 2753657 2754481 D mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 2753657..2754481 Acidovorax ebreus TPSY 7384259 YP_002554026.1 CDS Dtpsy_2591 NC_011992.1 2754478 2755221 D PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: ajs:Ajs_3238 phosphoribosylanthranilate isomerase; Phosphoribosylanthranilate isomerase 2754478..2755221 Acidovorax ebreus TPSY 7384260 YP_002554027.1 CDS Dtpsy_2592 NC_011992.1 2755222 2756490 D catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 2755222..2756490 Acidovorax ebreus TPSY 7384261 YP_002554028.1 CDS trpA NC_011992.1 2756487 2757296 D catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 2756487..2757296 Acidovorax ebreus TPSY 7384262 YP_002554029.1 CDS Dtpsy_2594 NC_011992.1 2757357 2758229 D TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; KEGG: ajs:Ajs_3241 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; acetyl-CoA carboxylase, carboxyl transferase, beta subunit 2757357..2758229 Acidovorax ebreus TPSY 7384263 YP_002554030.1 CDS Dtpsy_2595 NC_011992.1 2758308 2758856 R PFAM: protein of unknown function YGGT; KEGG: ajs:Ajs_3242 protein of unknown function YGGT; protein of unknown function YGGT complement(2758308..2758856) Acidovorax ebreus TPSY 7384264 YP_002554031.1 CDS Dtpsy_2596 NC_011992.1 2758942 2759589 D PFAM: peptidase S16 lon domain protein; SMART: peptidase S16 lon domain protein; KEGG: ajs:Ajs_3243 peptidase S16, lon domain-containing protein; peptidase S16 lon domain protein 2758942..2759589 Acidovorax ebreus TPSY 7384265 YP_002554032.1 CDS Dtpsy_2597 NC_011992.1 2759596 2760699 D PFAM: glycosyl transferase group 1; KEGG: ajs:Ajs_3244 glycosyl transferase, group 1; glycosyl transferase group 1 2759596..2760699 Acidovorax ebreus TPSY 7384266 YP_002554033.1 CDS Dtpsy_2598 NC_011992.1 2760696 2762009 D TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: ajs:Ajs_3245 sugar transferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 2760696..2762009 Acidovorax ebreus TPSY 7384267 YP_002554034.1 CDS Dtpsy_2599 NC_011992.1 2762013 2762717 R KEGG: ajs:Ajs_3246 hypothetical protein; hypothetical protein complement(2762013..2762717) Acidovorax ebreus TPSY 7384268 YP_002554035.1 CDS Dtpsy_2600 NC_011992.1 2762748 2763743 D PFAM: glycosyl transferase group 1; KEGG: ajs:Ajs_3247 glycosyl transferase, group 1; glycosyl transferase group 1 2762748..2763743 Acidovorax ebreus TPSY 7384269 YP_002554036.1 CDS Dtpsy_2601 NC_011992.1 2763737 2764609 D KEGG: ajs:Ajs_3248 putative glycosyltransferase; putative glycosyltransferase 2763737..2764609 Acidovorax ebreus TPSY 7384270 YP_002554037.1 CDS Dtpsy_2602 NC_011992.1 2764606 2765757 D KEGG: ajs:Ajs_3249 hypothetical protein; hypothetical protein 2764606..2765757 Acidovorax ebreus TPSY 7384271 YP_002554038.1 CDS lysS NC_011992.1 2765793 2767340 D class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 2765793..2767340 Acidovorax ebreus TPSY 7384272 YP_002554039.1 CDS Dtpsy_2604 NC_011992.1 2767414 2768439 D KEGG: ajs:Ajs_3251 response regulator receiver modulated diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; SMART: GGDEF domain containing protein; response regulator receiver; response regulator receiver modulated diguanylate cyclase 2767414..2768439 Acidovorax ebreus TPSY 7384273 YP_002554040.1 CDS Dtpsy_2605 NC_011992.1 2768479 2769147 D KEGG: ajs:Ajs_3252 small-conductance mechanosensitive channel-like protein; small-conductance mechanosensitive channel-like protein 2768479..2769147 Acidovorax ebreus TPSY 7384274 YP_002554041.1 CDS Dtpsy_2606 NC_011992.1 2769510 2770631 D PFAM: Extracellular ligand-binding receptor; KEGG: ajs:Ajs_3253 extracellular ligand-binding receptor; Extracellular ligand-binding receptor 2769510..2770631 Acidovorax ebreus TPSY 7384275 YP_002554042.1 CDS Dtpsy_2607 NC_011992.1 2770733 2771659 D PFAM: inner-membrane translocator; KEGG: ajs:Ajs_3254 inner-membrane translocator; inner-membrane translocator 2770733..2771659 Acidovorax ebreus TPSY 7384276 YP_002554043.1 CDS livM NC_011992.1 2771659 2772900 D Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine transporter permease subunit 2771659..2772900 Acidovorax ebreus TPSY 7384277 YP_002554044.1 CDS livG NC_011992.1 2772897 2773664 D Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine transporter ATP-binding subunit 2772897..2773664 Acidovorax ebreus TPSY 7384278 YP_002554045.1 CDS Dtpsy_2610 NC_011992.1 2773664 2774377 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_3257 ABC transporter related; ABC transporter related 2773664..2774377 Acidovorax ebreus TPSY 7384279 YP_002554046.1 CDS Dtpsy_2611 NC_011992.1 2774708 2774917 D KEGG: ajs:Ajs_3258 hypothetical protein; hypothetical protein 2774708..2774917 Acidovorax ebreus TPSY 7384280 YP_002554047.1 CDS Dtpsy_2612 NC_011992.1 2775271 2775723 R TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: ajs:Ajs_3259 alkylhydroperoxidase; alkylhydroperoxidase like protein, AhpD family complement(2775271..2775723) Acidovorax ebreus TPSY 7384281 YP_002554048.1 CDS Dtpsy_2613 NC_011992.1 2775953 2777005 R PFAM: phosphofructokinase; KEGG: ajs:Ajs_3260 6-phosphofructokinase; 6-phosphofructokinase complement(2775953..2777005) Acidovorax ebreus TPSY 7384282 YP_002554049.1 CDS Dtpsy_2614 NC_011992.1 2777020 2778129 R PFAM: glycoside hydrolase family 3 domain protein; KEGG: ajs:Ajs_3261 beta-N-acetylhexosaminidase; Beta-N-acetylhexosaminidase complement(2777020..2778129) Acidovorax ebreus TPSY 7384283 YP_002554050.1 CDS acpS NC_011992.1 2778188 2778580 R Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase complement(2778188..2778580) Acidovorax ebreus TPSY 7384284 YP_002554051.1 CDS Dtpsy_2616 NC_011992.1 2778632 2779411 R involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase complement(2778632..2779411) Acidovorax ebreus TPSY 7384285 YP_002554052.1 CDS Dtpsy_2617 NC_011992.1 2779551 2781266 R KEGG: ajs:Ajs_3264 hypothetical protein; hypothetical protein complement(2779551..2781266) Acidovorax ebreus TPSY 7384286 YP_002554053.1 CDS Dtpsy_2618 NC_011992.1 2781449 2782237 R TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; KEGG: ajs:Ajs_3265 DNA repair protein RecO; DNA repair protein RecO complement(2781449..2782237) Acidovorax ebreus TPSY 7384287 YP_002554054.1 CDS Dtpsy_2619 NC_011992.1 2782491 2783504 R TIGRFAM: small GTP-binding protein; GTP-binding protein Era; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; Miro domain protein; KEGG: ajs:Ajs_3266 GTP-binding protein Era; GTP-binding protein Era complement(2782491..2783504) Acidovorax ebreus TPSY 7384288 YP_002554055.1 CDS rnc NC_011992.1 2783501 2784187 R cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III complement(2783501..2784187) Acidovorax ebreus TPSY 7384289 YP_002554056.1 CDS Dtpsy_2621 NC_011992.1 2784193 2784570 R KEGG: ajs:Ajs_3268 putative transmembrane protein; putative transmembrane protein complement(2784193..2784570) Acidovorax ebreus TPSY 7384290 YP_002554057.1 CDS Dtpsy_2622 NC_011992.1 2784598 2785566 R KEGG: ajs:Ajs_3269 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; signal peptidase I complement(2784598..2785566) Acidovorax ebreus TPSY 7384291 YP_002554058.1 CDS Dtpsy_2623 NC_011992.1 2785581 2787389 R binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA complement(2785581..2787389) Acidovorax ebreus TPSY 7384292 YP_002554059.1 CDS Dtpsy_2624 NC_011992.1 2787830 2789302 R KEGG: ajs:Ajs_3271 protease Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; protease Do complement(2787830..2789302) Acidovorax ebreus TPSY 7384293 YP_002554060.1 CDS Dtpsy_2625 NC_011992.1 2789400 2790425 R PFAM: MucB/RseB family protein; KEGG: ajs:Ajs_3272 sigma E regulatory protein, MucB/RseB; sigma E regulatory protein, MucB/RseB complement(2789400..2790425) Acidovorax ebreus TPSY 7384294 YP_002554061.1 CDS Dtpsy_2626 NC_011992.1 2790491 2791114 R PFAM: Anti sigma-E protein RseA family protein; KEGG: ajs:Ajs_3273 anti sigma-E protein, RseA; anti sigma-E protein, RseA complement(2790491..2791114) Acidovorax ebreus TPSY 7384295 YP_002554062.1 CDS Dtpsy_2627 NC_011992.1 2791155 2791790 R Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE complement(2791155..2791790) Acidovorax ebreus TPSY 7384296 YP_002554063.1 CDS Dtpsy_2628 NC_011992.1 2791787 2792320 R KEGG: ajs:Ajs_3275 hypothetical protein; hypothetical protein complement(2791787..2792320) Acidovorax ebreus TPSY 7384297 YP_002554064.1 CDS Dtpsy_2629 NC_011992.1 2792412 2793656 R TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase; KEGG: ajs:Ajs_3276 3-oxoacyl-[acyl-carrier-protein] synthase II; 3-oxoacyl-(acyl-carrier-protein) synthase 2 complement(2792412..2793656) Acidovorax ebreus TPSY 7384298 YP_002554065.1 CDS acpP NC_011992.1 2793714 2793953 R carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein complement(2793714..2793953) Acidovorax ebreus TPSY 7384299 YP_002554066.1 CDS Dtpsy_2631 NC_011992.1 2794057 2794797 R TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ajs:Ajs_3278 3-oxoacyl-[acyl-carrier-protein] reductase; 3-oxoacyl-(acyl-carrier-protein) reductase complement(2794057..2794797) Acidovorax ebreus TPSY 7384300 YP_002554067.1 CDS Dtpsy_2632 NC_011992.1 2794794 2795747 R TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: ajs:Ajs_3279 [acyl-carrier-protein] S-malonyltransferase; malonyl CoA-acyl carrier protein transacylase complement(2794794..2795747) Acidovorax ebreus TPSY 7384301 YP_002554068.1 CDS Dtpsy_2633 NC_011992.1 2795804 2796781 R FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-(acyl carrier protein) synthase III complement(2795804..2796781) Acidovorax ebreus TPSY 7384302 YP_002554069.1 CDS Dtpsy_2634 NC_011992.1 2796800 2797831 R involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; putative glycerol-3-phosphate acyltransferase PlsX complement(2796800..2797831) Acidovorax ebreus TPSY 7384303 YP_002554070.1 CDS rpmF NC_011992.1 2797953 2798135 R some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 complement(2797953..2798135) Acidovorax ebreus TPSY 7384304 YP_002554071.1 CDS Dtpsy_2636 NC_011992.1 2798268 2798819 R PFAM: protein of unknown function DUF177; KEGG: ajs:Ajs_3283 hypothetical protein; protein of unknown function DUF177 complement(2798268..2798819) Acidovorax ebreus TPSY 7384305 YP_002554072.1 CDS Dtpsy_2637 NC_011992.1 2798846 2799445 D TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: ajs:Ajs_3284 maf protein; maf protein 2798846..2799445 Acidovorax ebreus TPSY 7384306 YP_002554073.1 CDS Dtpsy_2638 NC_011992.1 2799442 2800248 D PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: ajs:Ajs_3285 uroporphyrin-III C/tetrapyrrole methyltransferase; Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase 2799442..2800248 Acidovorax ebreus TPSY 7384307 YP_002554074.1 CDS Dtpsy_2639 NC_011992.1 2800333 2801376 R PFAM: peptidase S49; KEGG: ajs:Ajs_3286 peptidase S49; peptidase S49 complement(2800333..2801376) Acidovorax ebreus TPSY 7384308 YP_002554075.1 CDS Dtpsy_2640 NC_011992.1 2801381 2801758 R PFAM: Rieske [2Fe-2S] domain protein; KEGG: ajs:Ajs_3287 Rieske (2Fe-2S) domain-containing protein; Rieske (2Fe-2S) domain protein complement(2801381..2801758) Acidovorax ebreus TPSY 7384309 YP_002554076.1 CDS Dtpsy_2641 NC_011992.1 2801758 2802426 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ajs:Ajs_3288 HAD family hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 1 complement(2801758..2802426) Acidovorax ebreus TPSY 7384310 YP_002554077.1 CDS Dtpsy_2642 NC_011992.1 2802419 2803438 R KEGG: dac:Daci_5281 RluA family pseudouridine synthase; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; SMART: RNA-binding S4 domain protein; pseudouridine synthase, RluA family complement(2802419..2803438) Acidovorax ebreus TPSY 7384311 YP_002554078.1 CDS Dtpsy_2643 NC_011992.1 2804028 2807117 D KEGG: ajs:Ajs_3290 ribonuclease E; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; ribonuclease E and G; SMART: RNA binding S1 domain protein; ribonuclease, Rne/Rng family 2804028..2807117 Acidovorax ebreus TPSY 7384312 YP_002554079.1 CDS Dtpsy_2644 NC_011992.1 2807259 2808047 D PFAM: protein of unknown function DUF328; KEGG: ajs:Ajs_3291 hypothetical protein; hypothetical protein 2807259..2808047 Acidovorax ebreus TPSY 7384313 YP_002554080.1 CDS Dtpsy_2645 NC_011992.1 2808079 2808465 D KEGG: ajs:Ajs_3292 hypothetical protein; hypothetical protein 2808079..2808465 Acidovorax ebreus TPSY 7382123 YP_002554081.1 CDS Dtpsy_2646 NC_011992.1 2808488 2809357 D KEGG: ajs:Ajs_3293 2OG-Fe(II) oxygenase; PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; Procollagen-proline dioxygenase 2808488..2809357 Acidovorax ebreus TPSY 7382124 YP_002554082.1 CDS queF NC_011992.1 2809416 2810261 D catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 2809416..2810261 Acidovorax ebreus TPSY 7382125 YP_002554083.1 CDS Dtpsy_2648 NC_011992.1 2810264 2811826 R KEGG: ajs:Ajs_3295 methyl-accepting chemotaxis sensory transducer; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; SMART: PAC repeat-containing protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor complement(2810264..2811826) Acidovorax ebreus TPSY 7382126 YP_002554084.1 CDS Dtpsy_2649 NC_011992.1 2811917 2813128 R PFAM: UMUC domain protein DNA-repair protein; KEGG: vei:Veis_1647 DNA-directed DNA polymerase; DNA-directed DNA polymerase complement(2811917..2813128) Acidovorax ebreus TPSY 7382127 YP_002554085.1 CDS Dtpsy_2650 NC_011992.1 2813303 2814238 R KEGG: ajs:Ajs_3297 hypothetical protein; hypothetical protein complement(2813303..2814238) Acidovorax ebreus TPSY 7382128 YP_002554086.1 CDS Dtpsy_2651 NC_011992.1 2814396 2815568 R PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: ajs:Ajs_3298 (S)-2-hydroxy-acid oxidase; L-lactate dehydrogenase (cytochrome) complement(2814396..2815568) Acidovorax ebreus TPSY 7382129 YP_002554087.1 CDS Dtpsy_2652 NC_011992.1 2815785 2818091 R TIGRFAM: penicillin-binding protein 1C; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Penicillin-binding domain protein; KEGG: ajs:Ajs_3299 penicillin-binding protein 1C; penicillin-binding protein 1C complement(2815785..2818091) Acidovorax ebreus TPSY 7382130 YP_002554088.1 CDS Dtpsy_2653 NC_011992.1 2818063 2818935 R KEGG: ajs:Ajs_3300 hypothetical protein; hypothetical protein complement(2818063..2818935) Acidovorax ebreus TPSY 7382131 YP_002554089.1 CDS Dtpsy_2654 NC_011992.1 2819014 2819376 R PFAM: protein of unknown function DUF1232; KEGG: ajs:Ajs_3301 hypothetical protein; protein of unknown function DUF1232 complement(2819014..2819376) Acidovorax ebreus TPSY 7382132 YP_002554090.1 CDS Dtpsy_2655 NC_011992.1 2819521 2819736 D KEGG: ajs:Ajs_3302 hypothetical protein; hypothetical protein 2819521..2819736 Acidovorax ebreus TPSY 7382133 YP_002554091.1 CDS Dtpsy_2656 NC_011992.1 2819749 2820624 R PFAM: Endonuclease/exonuclease/phosphatase; KEGG: ajs:Ajs_3303 endonuclease/exonuclease/phosphatase; Endonuclease/exonuclease/phosphatase complement(2819749..2820624) Acidovorax ebreus TPSY 7382134 YP_002554092.1 CDS Dtpsy_2657 NC_011992.1 2820695 2821516 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_3304 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component complement(2820695..2821516) Acidovorax ebreus TPSY 7382135 YP_002554093.1 CDS Dtpsy_2658 NC_011992.1 2821677 2822579 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_3305 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component complement(2821677..2822579) Acidovorax ebreus TPSY 7382136 YP_002554094.1 CDS Dtpsy_2659 NC_011992.1 2822593 2823888 R PFAM: extracellular solute-binding protein family 1; KEGG: ajs:Ajs_3306 extracellular solute-binding protein; extracellular solute-binding protein family 1 complement(2822593..2823888) Acidovorax ebreus TPSY 7382137 YP_002554095.1 CDS Dtpsy_2660 NC_011992.1 2823982 2825022 R PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ajs:Ajs_3307 ABC transporter related; ABC transporter related complement(2823982..2825022) Acidovorax ebreus TPSY 7382138 YP_002554096.1 CDS Dtpsy_2661 NC_011992.1 2825187 2831207 R PFAM: alpha-2-macroglobulin; alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; KEGG: ajs:Ajs_3309 alpha-2-macroglobulin domain-containing protein; alpha-2-macroglobulin domain protein complement(2825187..2831207) Acidovorax ebreus TPSY 7382139 YP_002554097.1 CDS Dtpsy_2662 NC_011992.1 2831436 2833544 D PFAM: Catalase domain protein; KEGG: ajs:Ajs_3310 catalase; Catalase 2831436..2833544 Acidovorax ebreus TPSY 7382140 YP_002554098.1 CDS Dtpsy_2663 NC_011992.1 2833622 2834596 R PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_3311 hypothetical protein; hypothetical protein complement(2833622..2834596) Acidovorax ebreus TPSY 7382141 YP_002554099.1 CDS Dtpsy_2664 NC_011992.1 2834730 2836190 R catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase complement(2834730..2836190) Acidovorax ebreus TPSY 7382142 YP_002554100.1 CDS Dtpsy_2665 NC_011992.1 2836240 2837307 D PFAM: ATP-binding region ATPase domain protein; histidine kinase internal region; KEGG: ajs:Ajs_3313 histidine kinase internal region; histidine kinase internal region 2836240..2837307 Acidovorax ebreus TPSY 7382143 YP_002554101.1 CDS Dtpsy_2666 NC_011992.1 2837354 2838106 D PFAM: response regulator receiver; LytTr DNA-binding region; SMART: response regulator receiver; KEGG: ajs:Ajs_3314 LytR/AlgR family transcriptional regulator; two component transcriptional regulator, LytTR family 2837354..2838106 Acidovorax ebreus TPSY 7382144 YP_002554102.1 CDS Dtpsy_2667 NC_011992.1 2838252 2839082 R PFAM: zinc/iron permease; KEGG: ajs:Ajs_3315 zinc/iron permease; zinc/iron permease complement(2838252..2839082) Acidovorax ebreus TPSY 7382145 YP_002554103.1 CDS Dtpsy_2668 NC_011992.1 2839197 2840090 R PFAM: dienelactone hydrolase; KEGG: ajs:Ajs_3316 carboxymethylenebutenolidase; Carboxymethylenebutenolidase complement(2839197..2840090) Acidovorax ebreus TPSY 7382146 YP_002554104.1 CDS Dtpsy_2669 NC_011992.1 2840232 2843000 R KEGG: ajs:Ajs_3317 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; Helix-hairpin-helix domain protein class 2; DNA polymerase I complement(2840232..2843000) Acidovorax ebreus TPSY 7382147 YP_002554105.1 CDS Dtpsy_2670 NC_011992.1 2843143 2843559 D KEGG: ajs:Ajs_3318 hypothetical protein; hypothetical protein 2843143..2843559 Acidovorax ebreus TPSY 7382148 YP_002554106.1 CDS Dtpsy_2671 NC_011992.1 2843596 2843964 D KEGG: ajs:Ajs_3319 hypothetical protein; hypothetical protein 2843596..2843964 Acidovorax ebreus TPSY 7382149 YP_002554107.1 CDS Dtpsy_2672 NC_011992.1 2844056 2845006 D catalyzes the formation of O-phospho-L-homoserine from L-homoserine; homoserine kinase 2844056..2845006 Acidovorax ebreus TPSY 7382150 YP_002554108.1 CDS Dtpsy_2673 NC_011992.1 2845157 2845984 D KEGG: ajs:Ajs_3321 hypothetical protein; hypothetical protein 2845157..2845984 Acidovorax ebreus TPSY 7382151 YP_002554109.1 CDS Dtpsy_2674 NC_011992.1 2846248 2848398 R PFAM: protein of unknown function DUF839; KEGG: abb:ABBFA_003071 Tat (twin-arginine translocation) pathway signal sequence domain protein; protein of unknown function DUF839 complement(2846248..2848398) Acidovorax ebreus TPSY 7382152 YP_002554110.1 CDS Dtpsy_2675 NC_011992.1 2848579 2849280 R PFAM: OmpA/MotB domain protein; KEGG: ajs:Ajs_3322 OmpA/MotB domain-containing protein; OmpA/MotB domain protein complement(2848579..2849280) Acidovorax ebreus TPSY 7382153 YP_002554111.1 CDS Dtpsy_2676 NC_011992.1 2849280 2849888 R KEGG: ajs:Ajs_3323 hypothetical protein; hypothetical protein complement(2849280..2849888) Acidovorax ebreus TPSY 7382154 YP_002554112.1 CDS Dtpsy_2677 NC_011992.1 2850172 2852652 R PFAM: UvrD/REP helicase; KEGG: ajs:Ajs_3324 ATP-dependent DNA helicase UvrD; UvrD/REP helicase complement(2850172..2852652) Acidovorax ebreus TPSY 7382155 YP_002554113.1 CDS Dtpsy_2678 NC_011992.1 2852678 2853394 D KEGG: ajs:Ajs_3325 hypothetical protein; hypothetical protein 2852678..2853394 Acidovorax ebreus TPSY 7382156 YP_002554114.1 CDS Dtpsy_2679 NC_011992.1 2853586 2854563 D TIGRFAM: guanosine monophosphate reductase; PFAM: IMP dehydrogenase/GMP reductase; KEGG: ajs:Ajs_3326 guanosine 5'-monophosphate oxidoreductase; guanosine 5'-monophosphate oxidoreductase 2853586..2854563 Acidovorax ebreus TPSY 7382157 YP_002554115.1 CDS Dtpsy_2680 NC_011992.1 2854842 2856062 R PFAM: NnrS family protein; KEGG: eba:ebA2112 hypothetical protein; NnrS family protein complement(2854842..2856062) Acidovorax ebreus TPSY 7382159 YP_002554116.1 CDS Dtpsy_2681 NC_011992.1 2856125 2856958 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eba:ebA2113 ATPase component ABC-type transport system; ABC transporter related complement(2856125..2856958) Acidovorax ebreus TPSY 7382160 YP_002554117.1 CDS Dtpsy_2682 NC_011992.1 2856955 2857746 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eba:ebA2114 putative ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component complement(2856955..2857746) Acidovorax ebreus TPSY 7382161 YP_002554118.1 CDS Dtpsy_2683 NC_011992.1 2857748 2858077 R KEGG: neu:NE0632 hypothetical protein; hypothetical protein complement(2857748..2858077) Acidovorax ebreus TPSY 7382162 YP_002554119.1 CDS Dtpsy_2684 NC_011992.1 2858074 2858619 R KEGG: pap:PSPA7_3362 hypothetical protein; hypothetical protein complement(2858074..2858619) Acidovorax ebreus TPSY 7382163 YP_002554120.1 CDS Dtpsy_2685 NC_011992.1 2858633 2862643 R PFAM: CobN/magnesium chelatase; KEGG: neu:NE0757 cobaltochelatase; Cobaltochelatase complement(2858633..2862643) Acidovorax ebreus TPSY 7382164 YP_002554121.1 CDS Dtpsy_2686 NC_011992.1 2862729 2864681 R PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pau:PA14_39650 putative TonB-dependent receptor; TonB-dependent receptor plug complement(2862729..2864681) Acidovorax ebreus TPSY 7382165 YP_002554122.1 CDS Dtpsy_2687 NC_011992.1 2864666 2865796 R KEGG: eba:ebA2115 putative periplasmic component of ABC-type transport system; putative periplasmic component of ABC-type transport system complement(2864666..2865796) Acidovorax ebreus TPSY 7382166 YP_002554123.1 CDS Dtpsy_2688 NC_011992.1 2865807 2867969 R PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pde:Pden_4173 TonB-dependent receptor; TonB-dependent receptor complement(2865807..2867969) Acidovorax ebreus TPSY 7382167 YP_002554124.1 CDS Dtpsy_2689 NC_011992.1 2868045 2868785 D PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: ajs:Ajs_3341 Crp/FNR family transcriptional regulator; transcriptional regulator, Crp/Fnr family 2868045..2868785 Acidovorax ebreus TPSY 7382168 YP_002554125.1 CDS Dtpsy_2690 NC_011992.1 2868863 2869255 D KEGG: ajs:Ajs_3342 hypothetical protein; hypothetical protein 2868863..2869255 Acidovorax ebreus TPSY 7382169 YP_002554126.1 CDS Dtpsy_2691 NC_011992.1 2869349 2869837 D PFAM: protein of unknown function DUF461; KEGG: ajs:Ajs_3343 hypothetical protein; protein of unknown function DUF461 2869349..2869837 Acidovorax ebreus TPSY 7382170 YP_002554127.1 CDS Dtpsy_2692 NC_011992.1 2870019 2871254 D TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_3344 Bcr/CflA subfamily drug resistance transporter; drug resistance transporter, Bcr/CflA subfamily 2870019..2871254 Acidovorax ebreus TPSY 7382171 YP_002554128.1 CDS Dtpsy_2693 NC_011992.1 2871530 2873380 R PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: helicase domain protein; DEAD-like helicases; KEGG: ajs:Ajs_3345 DEAD/DEAH box helicase domain-containing protein; DEAD/DEAH box helicase domain protein complement(2871530..2873380) Acidovorax ebreus TPSY 7382172 YP_002554129.1 CDS Dtpsy_2694 NC_011992.1 2873663 2874241 R 3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease complement(2873663..2874241) Acidovorax ebreus TPSY 7382173 YP_002554130.1 CDS Dtpsy_2695 NC_011992.1 2874280 2875593 D PFAM: peptidase M48 Ste24p; KEGG: ajs:Ajs_3347 STE24 endopeptidase; Ste24 endopeptidase 2874280..2875593 Acidovorax ebreus TPSY 7382174 YP_002554131.1 CDS Dtpsy_2696 NC_011992.1 2875590 2875928 D PFAM: transcriptional coactivator/pterin dehydratase; KEGG: ajs:Ajs_3348 pterin-4-alpha-carbinolamine dehydratase; transcriptional coactivator/pterin dehydratase 2875590..2875928 Acidovorax ebreus TPSY 7382175 YP_002554132.1 CDS Dtpsy_2697 NC_011992.1 2875909 2876901 D TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; KEGG: ajs:Ajs_3349 ribosome small subunit-dependent GTPase A; ribosome small subunit-dependent GTPase A 2875909..2876901 Acidovorax ebreus TPSY 7382176 YP_002554133.1 CDS Dtpsy_2698 NC_011992.1 2876967 2877953 R PFAM: cobalamin biosynthesis protein CbiB; KEGG: ajs:Ajs_3350 cobalamin biosynthesis protein CbiB; cobalamin biosynthesis protein CbiB complement(2876967..2877953) Acidovorax ebreus TPSY 7382177 YP_002554134.1 CDS Dtpsy_2699 NC_011992.1 2878031 2878699 R PFAM: NUDIX hydrolase; KEGG: ajs:Ajs_3351 NUDIX hydrolase; NUDIX hydrolase complement(2878031..2878699) Acidovorax ebreus TPSY 7382178 YP_002554135.1 CDS rplS NC_011992.1 2878835 2879218 R this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 complement(2878835..2879218) Acidovorax ebreus TPSY 7382179 YP_002554136.1 CDS trmD NC_011992.1 2879332 2880099 R methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase complement(2879332..2880099) Acidovorax ebreus TPSY 7382180 YP_002554137.1 CDS rimM NC_011992.1 2880118 2880690 R Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM complement(2880118..2880690) Acidovorax ebreus TPSY 7382181 YP_002554138.1 CDS rpsP NC_011992.1 2880780 2881031 R binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 complement(2880780..2881031) Acidovorax ebreus TPSY 7382182 YP_002554139.1 CDS Dtpsy_2704 NC_011992.1 2881159 2881680 D PFAM: GCN5-related N-acetyltransferase; KEGG: ajs:Ajs_3356 GCN5-related N-acetyltransferase; GCN5-related N-acetyltransferase 2881159..2881680 Acidovorax ebreus TPSY 7382183 YP_002554140.1 CDS Dtpsy_2705 NC_011992.1 2881703 2882149 D KEGG: ajs:Ajs_3357 hypothetical protein; hypothetical protein 2881703..2882149 Acidovorax ebreus TPSY 7382184 YP_002554141.1 CDS Dtpsy_2706 NC_011992.1 2882287 2883297 R PFAM: phosphate transporter; KEGG: ajs:Ajs_3358 phosphate transporter; phosphate transporter complement(2882287..2883297) Acidovorax ebreus TPSY 7382185 YP_002554142.1 CDS Dtpsy_2707 NC_011992.1 2883357 2884004 R PFAM: protein of unknown function DUF47; KEGG: ajs:Ajs_3359 hypothetical protein; protein of unknown function DUF47 complement(2883357..2884004) Acidovorax ebreus TPSY 7382186 YP_002554143.1 CDS Dtpsy_2708 NC_011992.1 2884176 2884538 R PFAM: protein of unknown function DUF486; KEGG: ajs:Ajs_3360 hypothetical protein; protein of unknown function DUF486 complement(2884176..2884538) Acidovorax ebreus TPSY 7382187 YP_002554144.1 CDS Dtpsy_2709 NC_011992.1 2884658 2885386 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_3361 ABC transporter related; ABC transporter related complement(2884658..2885386) Acidovorax ebreus TPSY 7382188 YP_002554145.1 CDS Dtpsy_2710 NC_011992.1 2885399 2886181 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_3362 ABC transporter related; ABC transporter related complement(2885399..2886181) Acidovorax ebreus TPSY 7382189 YP_002554146.1 CDS Dtpsy_2711 NC_011992.1 2886203 2887279 R PFAM: inner-membrane translocator; KEGG: ajs:Ajs_3363 inner-membrane translocator; inner-membrane translocator complement(2886203..2887279) Acidovorax ebreus TPSY 7382190 YP_002554147.1 CDS Dtpsy_2712 NC_011992.1 2887293 2888222 R PFAM: inner-membrane translocator; KEGG: ajs:Ajs_3364 inner-membrane translocator; inner-membrane translocator complement(2887293..2888222) Acidovorax ebreus TPSY 7382191 YP_002554148.1 CDS Dtpsy_2713 NC_011992.1 2888579 2889907 R PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: ajs:Ajs_3365 recombination factor protein RarA; recombination factor protein RarA complement(2888579..2889907) Acidovorax ebreus TPSY 7382192 YP_002554149.1 CDS Dtpsy_2714 NC_011992.1 2889904 2890902 R TIGRFAM: integron integrase; PFAM: integrase family protein; KEGG: ajs:Ajs_3366 integron integrase; integron integrase complement(2889904..2890902) Acidovorax ebreus TPSY 7382193 YP_002554150.1 CDS Dtpsy_2715 NC_011992.1 2891507 2891752 D PFAM: protein of unknown function DUF1010; KEGG: ajs:Ajs_3982 hypothetical protein; protein of unknown function DUF1010 2891507..2891752 Acidovorax ebreus TPSY 7382194 YP_002554151.1 CDS Dtpsy_2717 NC_011992.1 2892101 2892490 D KEGG: ajs:Ajs_3379 hypothetical protein; hypothetical protein 2892101..2892490 Acidovorax ebreus TPSY 7382196 YP_002554152.1 CDS Dtpsy_2718 NC_011992.1 2892490 2893155 D PFAM: Uracil-DNA glycosylase superfamily; KEGG: ajs:Ajs_3380 uracil-DNA glycosylase superfamily protein; Uracil-DNA glycosylase superfamily 2892490..2893155 Acidovorax ebreus TPSY 7382197 YP_002554153.1 CDS Dtpsy_2719 NC_011992.1 2893216 2893854 R TIGRFAM: outer membrane lipoprotein carrier protein LolA; PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: ajs:Ajs_3381 outer membrane lipoprotein carrier protein LolA; outer membrane lipoprotein carrier protein LolA complement(2893216..2893854) Acidovorax ebreus TPSY 7382198 YP_002554154.1 CDS Dtpsy_2720 NC_011992.1 2893910 2896240 R PFAM: cell divisionFtsK/SpoIIIE; KEGG: ajs:Ajs_3382 DNA translocase FtsK; cell divisionFtsK/SpoIIIE complement(2893910..2896240) Acidovorax ebreus TPSY 7382199 YP_002554155.1 CDS Dtpsy_2721 NC_011992.1 2896533 2897486 D TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ajs:Ajs_3383 thioredoxin reductase; thioredoxin reductase 2896533..2897486 Acidovorax ebreus TPSY 7382200 YP_002554156.1 CDS rpmB NC_011992.1 2897719 2897952 D required for 70S ribosome assembly; 50S ribosomal protein L28 2897719..2897952 Acidovorax ebreus TPSY 7382201 YP_002554157.1 CDS rpmG NC_011992.1 2897973 2898143 D in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 2897973..2898143 Acidovorax ebreus TPSY 7382202 YP_002554158.1 CDS Dtpsy_2724 NC_011992.1 2898279 2899490 R PFAM: fatty acid desaturase; KEGG: ajs:Ajs_3386 fatty acid desaturase; fatty acid desaturase complement(2898279..2899490) Acidovorax ebreus TPSY 7382203 YP_002554159.1 CDS Dtpsy_2725 NC_011992.1 2899623 2900900 R PFAM: Fmu (Sun) domain protein; KEGG: ajs:Ajs_3387 Fmu (Sun) domain-containing protein; Fmu (Sun) domain protein complement(2899623..2900900) Acidovorax ebreus TPSY 7385492 YP_002554160.1 CDS Dtpsy_2726 NC_011992.1 2900944 2902815 R PFAM: peptidase M48 Ste24p; KEGG: ajs:Ajs_3388 peptidase M48, Ste24p; peptidase M48 Ste24p complement(2900944..2902815) Acidovorax ebreus TPSY 7385493 YP_002554161.1 CDS Dtpsy_2727 NC_011992.1 2902857 2903114 D PFAM: protein of unknown function DUF1653; KEGG: ajs:Ajs_3389 hypothetical protein; protein of unknown function DUF1653 2902857..2903114 Acidovorax ebreus TPSY 7385494 YP_002554162.1 CDS Dtpsy_2728 NC_011992.1 2903323 2903880 D KEGG: ajs:Ajs_3390 hypothetical protein; hypothetical protein 2903323..2903880 Acidovorax ebreus TPSY 7385495 YP_002554163.1 CDS purN NC_011992.1 2903945 2904529 R glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; phosphoribosylglycinamide formyltransferase complement(2903945..2904529) Acidovorax ebreus TPSY 7385496 YP_002554164.1 CDS Dtpsy_2730 NC_011992.1 2904553 2905230 D PFAM: protein of unknown function DUF480; KEGG: ajs:Ajs_3392 hypothetical protein; protein of unknown function DUF480 2904553..2905230 Acidovorax ebreus TPSY 7385497 YP_002554165.1 CDS Dtpsy_2731 NC_011992.1 2905318 2906499 D PFAM: acyl-CoA dehydrogenase domain protein; KEGG: ajs:Ajs_3393 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase domain protein 2905318..2906499 Acidovorax ebreus TPSY 7385498 YP_002554166.1 CDS Dtpsy_2732 NC_011992.1 2906512 2907627 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_3394 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase domain protein 2906512..2907627 Acidovorax ebreus TPSY 7385499 YP_002554167.1 CDS Dtpsy_2733 NC_011992.1 2907688 2908245 R PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: ajs:Ajs_3397 HNH endonuclease; HNH endonuclease complement(2907688..2908245) Acidovorax ebreus TPSY 7385500 YP_002554168.1 CDS Dtpsy_2734 NC_011992.1 2908408 2909451 D catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase 2908408..2909451 Acidovorax ebreus TPSY 7385501 YP_002554169.1 CDS Dtpsy_2735 NC_011992.1 2909566 2912421 D TIGRFAM: isoleucyl-tRNA synthetase; KEGG: ajs:Ajs_3399 isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase 2909566..2912421 Acidovorax ebreus TPSY 7385502 YP_002554170.1 CDS lspA NC_011992.1 2912421 2912918 D lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 2912421..2912918 Acidovorax ebreus TPSY 7385503 YP_002554171.1 CDS Dtpsy_2737 NC_011992.1 2913013 2914683 D TIGRFAM: Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; PhoU family protein; KEGG: ajs:Ajs_3401 Na/Pi-cotransporter II-related protein; Na/Pi-cotransporter II-related protein 2913013..2914683 Acidovorax ebreus TPSY 7385504 YP_002554172.1 CDS Dtpsy_2738 NC_011992.1 2914674 2915663 R KEGG: ajs:Ajs_3402 hypothetical protein; hypothetical protein complement(2914674..2915663) Acidovorax ebreus TPSY 7385505 YP_002554173.1 CDS Dtpsy_2739 NC_011992.1 2915885 2916706 R PFAM: NUDIX hydrolase; KEGG: ajs:Ajs_3404 NUDIX hydrolase; NUDIX hydrolase complement(2915885..2916706) Acidovorax ebreus TPSY 7385506 YP_002554174.1 CDS Dtpsy_2740 NC_011992.1 2916703 2917689 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: aav:Aave_3468 alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase zinc-binding domain protein complement(2916703..2917689) Acidovorax ebreus TPSY 7385507 YP_002554175.1 CDS Dtpsy_2741 NC_011992.1 2917855 2918724 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: ajs:Ajs_3406 hypothetical protein; protein of unknown function DUF6 transmembrane 2917855..2918724 Acidovorax ebreus TPSY 7385508 YP_002554176.1 CDS Dtpsy_2742 NC_011992.1 2918744 2921428 R KEGG: aav:Aave_3487 diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; SMART: GGDEF domain containing protein; EAL domain protein; diguanylate cyclase/phosphodiesterase complement(2918744..2921428) Acidovorax ebreus TPSY 7385509 YP_002554177.1 CDS Dtpsy_2743 NC_011992.1 2921425 2922507 R PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: ajs:Ajs_3408 TRAP dicarboxylate transporter-DctP subunit; TRAP dicarboxylate transporter- DctP subunit complement(2921425..2922507) Acidovorax ebreus TPSY 7385510 YP_002554178.1 CDS Dtpsy_2744 NC_011992.1 2922635 2923465 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: aav:Aave_1080 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(2922635..2923465) Acidovorax ebreus TPSY 7385511 YP_002554179.1 CDS Dtpsy_2745 NC_011992.1 2924143 2925654 R PFAM: protein of unknown function DUF112 transmembrane; KEGG: ajs:Ajs_3411 hypothetical protein; protein of unknown function DUF112 transmembrane complement(2924143..2925654) Acidovorax ebreus TPSY 7385512 YP_002554180.1 CDS Dtpsy_2746 NC_011992.1 2925671 2926159 R PFAM: protein of unknown function DUF1468; KEGG: ajs:Ajs_3412 hypothetical protein; protein of unknown function DUF1468 complement(2925671..2926159) Acidovorax ebreus TPSY 7385513 YP_002554181.1 CDS Dtpsy_2747 NC_011992.1 2926461 2928257 R PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; KEGG: ajs:Ajs_3413 type II secretion system protein E; type II secretion system protein E complement(2926461..2928257) Acidovorax ebreus TPSY 7385514 YP_002554182.1 CDS Dtpsy_2748 NC_011992.1 2928278 2929057 R KEGG: ajs:Ajs_3414 hypothetical protein; hypothetical protein complement(2928278..2929057) Acidovorax ebreus TPSY 7385515 YP_002554183.1 CDS Dtpsy_2749 NC_011992.1 2929044 2929598 R KEGG: ajs:Ajs_3415 hypothetical protein; hypothetical protein complement(2929044..2929598) Acidovorax ebreus TPSY 7385516 YP_002554184.1 CDS Dtpsy_2750 NC_011992.1 2929668 2930507 R PFAM: TatD-related deoxyribonuclease; KEGG: ajs:Ajs_3416 TatD-related deoxyribonuclease; TatD-related deoxyribonuclease complement(2929668..2930507) Acidovorax ebreus TPSY 7385517 YP_002554185.1 CDS Dtpsy_2751 NC_011992.1 2930629 2930826 R KEGG: ajs:Ajs_3417 hypothetical protein; hypothetical protein complement(2930629..2930826) Acidovorax ebreus TPSY 7385518 YP_002554186.1 CDS Dtpsy_2752 NC_011992.1 2930881 2931189 R PFAM: regulatory protein MarR; regulatory protein ArsR; transcriptional regulator TrmB; SMART: regulatory protein ArsR; KEGG: ajs:Ajs_3418 ArsR family transcriptional regulator; transcriptional regulator, TrmB complement(2930881..2931189) Acidovorax ebreus TPSY 7385519 YP_002554187.1 CDS Dtpsy_2753 NC_011992.1 2931303 2931674 D TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: ajs:Ajs_3419 alkylhydroperoxidase; alkylhydroperoxidase like protein, AhpD family 2931303..2931674 Acidovorax ebreus TPSY 7385520 YP_002554188.1 CDS Dtpsy_2754 NC_011992.1 2931730 2932410 R KEGG: ajs:Ajs_3420 lipoprotein releasing system, ATP-binding protein; TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; lipoprotein releasing system, ATP-binding protein complement(2931730..2932410) Acidovorax ebreus TPSY 7385521 YP_002554189.1 CDS Dtpsy_2755 NC_011992.1 2932403 2933656 R TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: ajs:Ajs_3421 LolC/E family lipoprotein releasing system, transmembrane protein; lipoprotein releasing system, transmembrane protein, LolC/E family complement(2932403..2933656) Acidovorax ebreus TPSY 7385522 YP_002554190.1 CDS Dtpsy_2756 NC_011992.1 2933794 2934984 R PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: ajs:Ajs_3422 glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase complement(2933794..2934984) Acidovorax ebreus TPSY 7385523 YP_002554191.1 CDS Dtpsy_2757 NC_011992.1 2935101 2936057 D KEGG: ajs:Ajs_3423 hypothetical protein; hypothetical protein 2935101..2936057 Acidovorax ebreus TPSY 7385524 YP_002554192.1 CDS Dtpsy_2758 NC_011992.1 2936054 2937778 D TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: ajs:Ajs_3424 single-stranded-DNA-specific exonuclease RecJ; single-stranded-DNA-specific exonuclease RecJ 2936054..2937778 Acidovorax ebreus TPSY 7385525 YP_002554193.1 CDS Dtpsy_2759 NC_011992.1 2937873 2938553 D PFAM: Curli production assembly/transport component CsgG; KEGG: dac:Daci_5407 curli production assembly/transport component CsgG; Curli production assembly/transport component CsgG 2937873..2938553 Acidovorax ebreus TPSY 7385526 YP_002554194.1 CDS Dtpsy_2760 NC_011992.1 2938550 2938927 D KEGG: ajs:Ajs_3428 hypothetical protein; hypothetical protein 2938550..2938927 Acidovorax ebreus TPSY 7385527 YP_002554195.1 CDS Dtpsy_2761 NC_011992.1 2938924 2939598 D PFAM: protein of unknown function DUF799; KEGG: ajs:Ajs_3429 hypothetical protein; protein of unknown function DUF799 2938924..2939598 Acidovorax ebreus TPSY 7385528 YP_002554196.1 CDS Dtpsy_2762 NC_011992.1 2939708 2941462 R PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; SMART: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: ajs:Ajs_3430 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(2939708..2941462) Acidovorax ebreus TPSY 7385529 YP_002554197.1 CDS Dtpsy_2763 NC_011992.1 2941676 2942554 D PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: ajs:Ajs_3431 phosphotransferase domain-containing protein; PHP domain protein 2941676..2942554 Acidovorax ebreus TPSY 7385530 YP_002554198.1 CDS Dtpsy_2764 NC_011992.1 2942570 2943205 D TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; KEGG: ajs:Ajs_3432 SUA5/YciO/YrdC/YwlC family protein; Sua5/YciO/YrdC/YwlC family protein 2942570..2943205 Acidovorax ebreus TPSY 7385531 YP_002554199.1 CDS Dtpsy_2765 NC_011992.1 2943331 2945400 R PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: ajs:Ajs_3433 von Willebrand factor, type A; von Willebrand factor type A complement(2943331..2945400) Acidovorax ebreus TPSY 7385532 YP_002554200.1 CDS Dtpsy_2766 NC_011992.1 2945403 2946206 R PFAM: ATPase associated with various cellular activities AAA_5; CbbQ/NirQ/NorQ domain protein; KEGG: ajs:Ajs_3434 ATPase; ATPase associated with various cellular activities AAA_5 complement(2945403..2946206) Acidovorax ebreus TPSY 7385533 YP_002554201.1 CDS Dtpsy_2767 NC_011992.1 2946226 2947599 R KEGG: ajs:Ajs_3435 cytochrome c oxidase, subunit I; Nitric-oxide reductase complement(2946226..2947599) Acidovorax ebreus TPSY 7385534 YP_002554202.1 CDS Dtpsy_2768 NC_011992.1 2947630 2948502 R PFAM: cytochrome c class I; KEGG: ajs:Ajs_3436 cytochrome c, class I; cytochrome c class I complement(2947630..2948502) Acidovorax ebreus TPSY 7385535 YP_002554203.1 CDS Dtpsy_2769 NC_011992.1 2948516 2948635 R hypothetical protein complement(2948516..2948635) Acidovorax ebreus TPSY 7385536 YP_002554204.1 CDS Dtpsy_2770 NC_011992.1 2948775 2949461 D PFAM: peptidase M50; KEGG: ajs:Ajs_3437 peptidase M50; peptidase M50 2948775..2949461 Acidovorax ebreus TPSY 7385537 YP_002554205.1 CDS Dtpsy_2771 NC_011992.1 2949486 2950790 D catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 2949486..2950790 Acidovorax ebreus TPSY 7385538 YP_002554206.1 CDS Dtpsy_2772 NC_011992.1 2951074 2952402 R catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase complement(2951074..2952402) Acidovorax ebreus TPSY 7385540 YP_002554207.1 CDS Dtpsy_2773 NC_011992.1 2952534 2953214 D PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: ajs:Ajs_3446 signal transduction protein; putative signal transduction protein with CBS domains 2952534..2953214 Acidovorax ebreus TPSY 7385541 YP_002554208.1 CDS Dtpsy_2774 NC_011992.1 2953218 2954540 R PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: ajs:Ajs_3447 hypothetical protein; protein of unknown function DUF21 complement(2953218..2954540) Acidovorax ebreus TPSY 7385542 YP_002554209.1 CDS ispH NC_011992.1 2954790 2955785 R catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase complement(2954790..2955785) Acidovorax ebreus TPSY 7385543 YP_002554210.1 CDS Dtpsy_2776 NC_011992.1 2955799 2956275 R PFAM: peptidylprolyl isomerase FKBP-type; KEGG: aav:Aave_3772 peptidylprolyl isomerase, FKBP-type; peptidylprolyl isomerase FKBP-type complement(2955799..2956275) Acidovorax ebreus TPSY 7385544 YP_002554211.1 CDS radC NC_011992.1 2956358 2957074 D Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 2956358..2957074 Acidovorax ebreus TPSY 7385545 YP_002554212.1 CDS Dtpsy_2778 NC_011992.1 2957071 2958285 D KEGG: ajs:Ajs_3451 hypothetical protein; hypothetical protein 2957071..2958285 Acidovorax ebreus TPSY 7385546 YP_002554213.1 CDS Dtpsy_2779 NC_011992.1 2958258 2958950 D PFAM: Smr protein/MutS2; SMART: Smr protein/MutS2; KEGG: ajs:Ajs_3452 Smr protein/MutS2; Smr protein/MutS2 2958258..2958950 Acidovorax ebreus TPSY 7385547 YP_002554214.1 CDS Dtpsy_2780 NC_011992.1 2959085 2961166 R PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: ajs:Ajs_3453 5'-nucleotidase domain-containing protein; 5'-Nucleotidase domain protein complement(2959085..2961166) Acidovorax ebreus TPSY 7385548 YP_002554215.1 CDS Dtpsy_2781 NC_011992.1 2961305 2961730 R PFAM: globin; KEGG: ajs:Ajs_3454 globin; globin complement(2961305..2961730) Acidovorax ebreus TPSY 7385549 YP_002554216.1 CDS Dtpsy_2782 NC_011992.1 2961773 2962159 R PFAM: zinc finger DksA/TraR C4-type; KEGG: ajs:Ajs_3455 TraR/DksA family transcriptional regulator; transcriptional regulator, TraR/DksA family complement(2961773..2962159) Acidovorax ebreus TPSY 7385550 YP_002554217.1 CDS Dtpsy_2783 NC_011992.1 2962203 2963774 R KEGG: ajs:Ajs_3456 hypothetical protein; hypothetical protein complement(2962203..2963774) Acidovorax ebreus TPSY 7385551 YP_002554218.1 CDS Dtpsy_2784 NC_011992.1 2963820 2964047 R KEGG: ajs:Ajs_3457 hypothetical protein; hypothetical protein complement(2963820..2964047) Acidovorax ebreus TPSY 7385552 YP_002554219.1 CDS Dtpsy_2785 NC_011992.1 2964056 2966629 R PFAM: protein of unknown function DUF214; KEGG: ajs:Ajs_3458 hypothetical protein; protein of unknown function DUF214 complement(2964056..2966629) Acidovorax ebreus TPSY 7385553 YP_002554220.1 CDS Dtpsy_2786 NC_011992.1 2966703 2967593 R PFAM: formate dehydrogenase subunit FdhD; KEGG: ajs:Ajs_3459 formate dehydrogenase, subunit FdhD; formate dehydrogenase subunit FdhD complement(2966703..2967593) Acidovorax ebreus TPSY 7385554 YP_002554221.1 CDS Dtpsy_2787 NC_011992.1 2967708 2968100 R KEGG: ajs:Ajs_3460 hypothetical protein; hypothetical protein complement(2967708..2968100) Acidovorax ebreus TPSY 7385555 YP_002554222.1 CDS Dtpsy_2788 NC_011992.1 2968097 2969302 R TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: ajs:Ajs_3461 formate dehydrogenase gamma subunit; formate dehydrogenase, gamma subunit complement(2968097..2969302) Acidovorax ebreus TPSY 7385556 YP_002554223.1 CDS Dtpsy_2789 NC_011992.1 2969316 2969549 R KEGG: ajs:Ajs_3462 putative lipoprotein; putative lipoprotein complement(2969316..2969549) Acidovorax ebreus TPSY 7385557 YP_002554224.1 CDS Dtpsy_2790 NC_011992.1 2969546 2970166 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ajs:Ajs_3463 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein complement(2969546..2970166) Acidovorax ebreus TPSY 7385558 YP_002554225.1 CDS Dtpsy_2791 NC_011992.1 2970177 2973146 R PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: ajs:Ajs_3464 molybdopterin oxidoreductase; molybdopterin oxidoreductase complement(2970177..2973146) Acidovorax ebreus TPSY 7385559 YP_002554226.1 CDS Dtpsy_2792 NC_011992.1 2973168 2973380 R TIGRFAM: formate dehydrogenase region TAT target; KEGG: pol:Bpro_0936 twin-arginine translocation pathway signal; formate dehydrogenase region TAT target complement(2973168..2973380) Acidovorax ebreus TPSY 7385560 YP_002554227.1 CDS Dtpsy_2793 NC_011992.1 2973554 2974192 R PFAM: cytoplasmic chaperone TorD family protein; KEGG: ajs:Ajs_3466 cytoplasmic chaperone TorD family protein; cytoplasmic chaperone TorD family protein complement(2973554..2974192) Acidovorax ebreus TPSY 7385561 YP_002554228.1 CDS Dtpsy_2794 NC_011992.1 2974189 2976252 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ajs:Ajs_3467 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein complement(2974189..2976252) Acidovorax ebreus TPSY 7385562 YP_002554229.1 CDS Dtpsy_2795 NC_011992.1 2976212 2976895 R KEGG: ajs:Ajs_3468 hypothetical protein; hypothetical protein complement(2976212..2976895) Acidovorax ebreus TPSY 7385563 YP_002554230.1 CDS Dtpsy_2796 NC_011992.1 2976888 2977469 R KEGG: ajs:Ajs_3469 hypothetical protein; hypothetical protein complement(2976888..2977469) Acidovorax ebreus TPSY 7385564 YP_002554231.1 CDS Dtpsy_2797 NC_011992.1 2977491 2980376 R TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: ajs:Ajs_3470 formate dehydrogenase, alpha subunit; formate dehydrogenase, alpha subunit complement(2977491..2980376) Acidovorax ebreus TPSY 7385565 YP_002554232.1 CDS Dtpsy_2798 NC_011992.1 2980373 2982358 R PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: ajs:Ajs_3471 NADH dehydrogenase (quinone); Respiratory-chain NADH dehydrogenase domain 51 kDa subunit complement(2980373..2982358) Acidovorax ebreus TPSY 7385566 YP_002554233.1 CDS Dtpsy_2799 NC_011992.1 2982707 2983822 D TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: azo:azo1390 probable phosphate-binding periplasmic protein; phosphate ABC transporter, periplasmic phosphate-binding protein 2982707..2983822 Acidovorax ebreus TPSY 7385567 YP_002554234.1 CDS Dtpsy_2800 NC_011992.1 2983844 2984935 R PFAM: protein of unknown function DUF59; KEGG: ajs:Ajs_3476 hypothetical protein; protein of unknown function DUF59 complement(2983844..2984935) Acidovorax ebreus TPSY 7385568 YP_002554235.1 CDS Dtpsy_2801 NC_011992.1 2985014 2986084 R PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: ajs:Ajs_3478 C4-dicarboxylate transporter/malic acid transport protein; C4-dicarboxylate transporter/malic acid transport protein complement(2985014..2986084) Acidovorax ebreus TPSY 7385569 YP_002554236.1 CDS Dtpsy_2802 NC_011992.1 2986081 2987151 R TIGRFAM: selenide, water dikinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: ajs:Ajs_3479 selenophosphate synthase; selenide, water dikinase complement(2986081..2987151) Acidovorax ebreus TPSY 7385570 YP_002554237.1 CDS Dtpsy_2803 NC_011992.1 2987280 2988329 D catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA; tRNA 2-selenouridine synthase 2987280..2988329 Acidovorax ebreus TPSY 7385571 YP_002554238.1 CDS Dtpsy_2804 NC_011992.1 2988496 2989065 D PFAM: restriction endonuclease; KEGG: ajs:Ajs_3481 restriction endonuclease; restriction endonuclease 2988496..2989065 Acidovorax ebreus TPSY 7385572 YP_002554239.1 CDS Dtpsy_2805 NC_011992.1 2989096 2990328 D PFAM: Patatin; KEGG: aav:Aave_3832 patatin; Patatin 2989096..2990328 Acidovorax ebreus TPSY 7384916 YP_002554240.1 CDS metG NC_011992.1 2990388 2992454 D methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 2990388..2992454 Acidovorax ebreus TPSY 7384917 YP_002554241.1 CDS Dtpsy_2807 NC_011992.1 2992454 2992780 D KEGG: ajs:Ajs_3484 hypothetical protein; hypothetical protein 2992454..2992780 Acidovorax ebreus TPSY 7384918 YP_002554242.1 CDS Dtpsy_2808 NC_011992.1 2992829 2993842 R PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ajs:Ajs_3485 AraC family transcriptional regulator; transcriptional regulator, AraC family complement(2992829..2993842) Acidovorax ebreus TPSY 7384919 YP_002554243.1 CDS Dtpsy_2809 NC_011992.1 2993958 2995571 D PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: ajs:Ajs_3486 fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein; fumarate reductase/succinate dehydrogenase flavoprotein domain protein 2993958..2995571 Acidovorax ebreus TPSY 7384920 YP_002554244.1 CDS Dtpsy_2810 NC_011992.1 2995568 2996716 D PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: ajs:Ajs_3487 FMN-dependent alpha-hydroxy acid dehydrogenase; FMN-dependent alpha-hydroxy acid dehydrogenase 2995568..2996716 Acidovorax ebreus TPSY 7384921 YP_002554245.1 CDS Dtpsy_2811 NC_011992.1 2996788 2998443 D thiamine-pyrophosphate requiring enzyme; hypothetical protein 2996788..2998443 Acidovorax ebreus TPSY 7384922 YP_002554246.1 CDS Dtpsy_2812 NC_011992.1 2998564 2999250 R PFAM: protein of unknown function DUF161; KEGG: ajs:Ajs_3489 hypothetical protein; protein of unknown function DUF161 complement(2998564..2999250) Acidovorax ebreus TPSY 7384923 YP_002554247.1 CDS Dtpsy_2813 NC_011992.1 2999400 2999900 R KEGG: ajs:Ajs_3490 putative lipoprotein; putative lipoprotein complement(2999400..2999900) Acidovorax ebreus TPSY 7384924 YP_002554248.1 CDS Dtpsy_2814 NC_011992.1 3000045 3000248 D KEGG: ajs:Ajs_3491 hypothetical protein; hypothetical protein 3000045..3000248 Acidovorax ebreus TPSY 7384925 YP_002554249.1 CDS Dtpsy_2815 NC_011992.1 3000324 3001184 D PFAM: chromosome segregation and condensation protein ScpA; KEGG: ajs:Ajs_3492 condensin subunit ScpA; chromosome segregation and condensation protein ScpA 3000324..3001184 Acidovorax ebreus TPSY 7384926 YP_002554250.1 CDS Dtpsy_2816 NC_011992.1 3001234 3002823 D KEGG: ajs:Ajs_3493 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; L-aspartate oxidase 3001234..3002823 Acidovorax ebreus TPSY 7384927 YP_002554251.1 CDS Dtpsy_2817 NC_011992.1 3002851 3003231 D Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 3002851..3003231 Acidovorax ebreus TPSY 7384928 YP_002554252.1 CDS Dtpsy_2818 NC_011992.1 3003262 3003624 D PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase; KEGG: ajs:Ajs_3495 5-carboxymethyl-2-hydroxymuconate isomerase; 5-carboxymethyl-2-hydroxymuconate isomerase 3003262..3003624 Acidovorax ebreus TPSY 7384929 YP_002554253.1 CDS Dtpsy_2819 NC_011992.1 3003963 3005762 R TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: aminotransferase class IV; Chorismate binding-like; KEGG: ajs:Ajs_3496 para-aminobenzoate synthase, subunit I; para-aminobenzoate synthase, subunit I complement(3003963..3005762) Acidovorax ebreus TPSY 7384930 YP_002554254.1 CDS Dtpsy_2820 NC_011992.1 3005832 3006956 R 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase complement(3005832..3006956) Acidovorax ebreus TPSY 7384931 YP_002554255.1 CDS Dtpsy_2821 NC_011992.1 3007036 3007914 R KEGG: ajs:Ajs_3498 nicotinate-nucleotide pyrophosphorylase [carboxylating]; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; nicotinate-nucleotide pyrophosphorylase complement(3007036..3007914) Acidovorax ebreus TPSY 7384932 YP_002554256.1 CDS panB NC_011992.1 3007980 3008861 D catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 3007980..3008861 Acidovorax ebreus TPSY 7384933 YP_002554257.1 CDS panC NC_011992.1 3008878 3009750 D catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 3008878..3009750 Acidovorax ebreus TPSY 7384934 YP_002554258.1 CDS gpsA NC_011992.1 3010053 3011045 R catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase complement(3010053..3011045) Acidovorax ebreus TPSY 7384935 YP_002554259.1 CDS Dtpsy_2825 NC_011992.1 3011118 3011570 R molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB complement(3011118..3011570) Acidovorax ebreus TPSY 7384936 YP_002554260.1 CDS Dtpsy_2826 NC_011992.1 3011672 3011929 R TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; KEGG: ajs:Ajs_3503 glutaredoxin 3; glutaredoxin 3 complement(3011672..3011929) Acidovorax ebreus TPSY 7384937 YP_002554261.1 CDS Dtpsy_2827 NC_011992.1 3011980 3012387 R PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: ajs:Ajs_3504 rhodanese domain-containing protein; Rhodanese domain protein complement(3011980..3012387) Acidovorax ebreus TPSY 7384938 YP_002554262.1 CDS gpmA NC_011992.1 3012461 3013204 D 2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase 3012461..3013204 Acidovorax ebreus TPSY 7384939 YP_002554263.1 CDS Dtpsy_2829 NC_011992.1 3013320 3014756 D KEGG: ajs:Ajs_3506 C-terminal processing peptidase-3; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; SMART: PDZ/DHR/GLGF domain protein; peptidase S41; carboxyl-terminal protease 3013320..3014756 Acidovorax ebreus TPSY 7384940 YP_002554264.1 CDS Dtpsy_2830 NC_011992.1 3014824 3015588 D PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: ajs:Ajs_3507 UBA/ThiF-type NAD/FAD binding protein; UBA/THIF-type NAD/FAD binding protein 3014824..3015588 Acidovorax ebreus TPSY 7384941 YP_002554265.1 CDS Dtpsy_2831 NC_011992.1 3015697 3016107 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: ajs:Ajs_3508 response regulator receiver protein; response regulator receiver protein 3015697..3016107 Acidovorax ebreus TPSY 7384942 YP_002554266.1 CDS Dtpsy_2832 NC_011992.1 3016224 3016856 R PFAM: regulatory protein LuxR; response regulator receiver; SMART: regulatory protein LuxR; response regulator receiver; KEGG: ajs:Ajs_3509 two component LuxR family transcriptional regulator; two component transcriptional regulator, LuxR family complement(3016224..3016856) Acidovorax ebreus TPSY 7384943 YP_002554267.1 CDS Dtpsy_2833 NC_011992.1 3017010 3018353 D PFAM: ATP-binding region ATPase domain protein; CHASE3 domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein; KEGG: ajs:Ajs_3510 multi-sensor signal transduction histidine kinase; histidine kinase 3017010..3018353 Acidovorax ebreus TPSY 7384944 YP_002554268.1 CDS Dtpsy_2834 NC_011992.1 3018521 3018685 D PFAM: protein of unknown function DUF1328; KEGG: ajs:Ajs_3511 hypothetical protein; hypothetical protein 3018521..3018685 Acidovorax ebreus TPSY 7384945 YP_002554269.1 CDS Dtpsy_2835 NC_011992.1 3018741 3019133 D KEGG: ajs:Ajs_3512 hypothetical protein; hypothetical protein 3018741..3019133 Acidovorax ebreus TPSY 7384946 YP_002554270.1 CDS Dtpsy_2836 NC_011992.1 3019156 3019701 D PFAM: Rubrerythrin; Ferritin Dps family protein; KEGG: ajs:Ajs_3513 ferritin, Dps family protein; Ferritin Dps family protein 3019156..3019701 Acidovorax ebreus TPSY 7384947 YP_002554271.1 CDS Dtpsy_2837 NC_011992.1 3019801 3020115 D PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: ajs:Ajs_3514 transport-associated; transport-associated 3019801..3020115 Acidovorax ebreus TPSY 7384948 YP_002554272.1 CDS Dtpsy_2838 NC_011992.1 3020207 3021307 D KEGG: ajs:Ajs_3515 hypothetical protein; hypothetical protein 3020207..3021307 Acidovorax ebreus TPSY 7384949 YP_002554273.1 CDS coaD NC_011992.1 3021308 3021805 R Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase complement(3021308..3021805) Acidovorax ebreus TPSY 7384950 YP_002554274.1 CDS Dtpsy_2840 NC_011992.1 3021951 3022574 R TIGRFAM: methyltransferase; PFAM: Protein of unknown function methylase putative; KEGG: ajs:Ajs_3517 putative methyltransferase; methyltransferase complement(3021951..3022574) Acidovorax ebreus TPSY 7384951 YP_002554275.1 CDS Dtpsy_2841 NC_011992.1 3022571 3023953 R PFAM: peptidase M16 domain protein; KEGG: ajs:Ajs_3518 peptidase M16 domain-containing protein; peptidase M16 domain protein complement(3022571..3023953) Acidovorax ebreus TPSY 7384952 YP_002554276.1 CDS Dtpsy_2842 NC_011992.1 3023969 3025423 R PFAM: peptidase M16 domain protein; KEGG: ajs:Ajs_3519 peptidase M16 domain-containing protein; peptidase M16 domain protein complement(3023969..3025423) Acidovorax ebreus TPSY 7384953 YP_002554277.1 CDS Dtpsy_2843 NC_011992.1 3025453 3026601 D KEGG: ajs:Ajs_3520 signal recognition particle-docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; signal recognition particle-docking protein FtsY 3025453..3026601 Acidovorax ebreus TPSY 7384954 YP_002554278.1 CDS Dtpsy_2844 NC_011992.1 3026653 3027015 R PFAM: CutA1 divalent ion tolerance protein; KEGG: ajs:Ajs_3521 CutA1 divalent ion tolerance protein; CutA1 divalent ion tolerance protein complement(3026653..3027015) Acidovorax ebreus TPSY 7384955 YP_002554279.1 CDS Dtpsy_2845 NC_011992.1 3027207 3028142 D TIGRFAM: RNA polymerase sigma factor RpoH; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: ajs:Ajs_3522 RNA polymerase, sigma 32 subunit, RpoH; RNA polymerase, sigma 32 subunit, RpoH 3027207..3028142 Acidovorax ebreus TPSY 7384956 YP_002554280.1 CDS Dtpsy_2846 NC_011992.1 3028269 3029279 D PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_3523 hypothetical protein; hypothetical protein 3028269..3029279 Acidovorax ebreus TPSY 7384957 YP_002554281.1 CDS Dtpsy_2847 NC_011992.1 3029516 3030298 D PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: ajs:Ajs_3524 cyclic nucleotide-binding protein; cyclic nucleotide-binding protein 3029516..3030298 Acidovorax ebreus TPSY 7384958 YP_002554282.1 CDS Dtpsy_2848 NC_011992.1 3030320 3032212 R KEGG: ajs:Ajs_3525 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold domain protein; SMART: PAS domain containing protein; GGDEF domain containing protein; EAL domain protein; diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) complement(3030320..3032212) Acidovorax ebreus TPSY 7384959 YP_002554283.1 CDS Dtpsy_2849 NC_011992.1 3032359 3032922 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; electron transport protein SCO1/SenC; KEGG: ajs:Ajs_3526 electron transport protein SCO1/SenC; electron transport protein SCO1/SenC complement(3032359..3032922) Acidovorax ebreus TPSY 7384960 YP_002554284.1 CDS Dtpsy_2850 NC_011992.1 3032980 3033900 R converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase complement(3032980..3033900) Acidovorax ebreus TPSY 7384961 YP_002554285.1 CDS Dtpsy_2851 NC_011992.1 3033897 3035096 R PFAM: cytochrome oxidase assembly; KEGG: ajs:Ajs_3528 cytochrome oxidase assembly; cytochrome oxidase assembly complement(3033897..3035096) Acidovorax ebreus TPSY 7384962 YP_002554286.1 CDS Dtpsy_2852 NC_011992.1 3035093 3035752 R KEGG: ajs:Ajs_3529 hypothetical protein; hypothetical protein complement(3035093..3035752) Acidovorax ebreus TPSY 7384963 YP_002554287.1 CDS Dtpsy_2853 NC_011992.1 3035784 3036560 R KEGG: ajs:Ajs_3530 putative transmembrane cytochrome oxidase; putative transmembrane cytochrome oxidase complement(3035784..3036560) Acidovorax ebreus TPSY 7384964 YP_002554288.1 CDS Dtpsy_2854 NC_011992.1 3036576 3036800 D KEGG: ajs:Ajs_3531 putative transmembrane protein; putative transmembrane protein 3036576..3036800 Acidovorax ebreus TPSY 7384965 YP_002554289.1 CDS Dtpsy_2855 NC_011992.1 3036978 3037859 R PFAM: cytochrome c oxidase subunit III; KEGG: ajs:Ajs_3532 cytochrome c oxidase, subunit III; cytochrome c oxidase subunit III complement(3036978..3037859) Acidovorax ebreus TPSY 7384966 YP_002554290.1 CDS Dtpsy_2856 NC_011992.1 3037918 3038127 R KEGG: ajs:Ajs_3533 hypothetical protein; hypothetical protein complement(3037918..3038127) Acidovorax ebreus TPSY 7384967 YP_002554291.1 CDS Dtpsy_2857 NC_011992.1 3038124 3038744 R involved in the insertion of copper into subunit I of cytochrome C oxidase; cytochrome C oxidase assembly protein complement(3038124..3038744) Acidovorax ebreus TPSY 7384968 YP_002554292.1 CDS Dtpsy_2858 NC_011992.1 3038760 3038870 R KEGG: ajs:Ajs_3535 hypothetical protein; hypothetical protein complement(3038760..3038870) Acidovorax ebreus TPSY 7384969 YP_002554293.1 CDS Dtpsy_2859 NC_011992.1 3038888 3040522 R KEGG: ajs:Ajs_3536 cytochrome-c oxidase; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; cytochrome c oxidase, subunit I complement(3038888..3040522) Acidovorax ebreus TPSY 7384970 YP_002554294.1 CDS Dtpsy_2860 NC_011992.1 3040555 3041724 R TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome c class I; cytochrome C oxidase subunit II transmembrane region; KEGG: ajs:Ajs_3537 cytochrome c oxidase, subunit II; cytochrome c oxidase, subunit II complement(3040555..3041724) Acidovorax ebreus TPSY 7384971 YP_002554295.1 CDS Dtpsy_2861 NC_011992.1 3041816 3042109 D KEGG: ajs:Ajs_3538 hypothetical protein; hypothetical protein 3041816..3042109 Acidovorax ebreus TPSY 7384972 YP_002554296.1 CDS Dtpsy_2862 NC_011992.1 3042148 3043056 R KEGG: ajs:Ajs_3539 biotin synthesis protein BioC; biotin synthesis protein BioC complement(3042148..3043056) Acidovorax ebreus TPSY 7384973 YP_002554297.1 CDS Dtpsy_2863 NC_011992.1 3043092 3043820 D PFAM: phosphoribosyltransferase; KEGG: ajs:Ajs_3540 ComF family protein; phosphoribosyltransferase 3043092..3043820 Acidovorax ebreus TPSY 7384974 YP_002554298.1 CDS Dtpsy_2864 NC_011992.1 3043911 3044399 D PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: ajs:Ajs_3541 tRNA/rRNA methyltransferase (SpoU); tRNA/rRNA methyltransferase (SpoU) 3043911..3044399 Acidovorax ebreus TPSY 7384975 YP_002554299.1 CDS Dtpsy_2865 NC_011992.1 3044431 3044895 R PFAM: MaoC domain protein dehydratase; KEGG: ajs:Ajs_3542 dehydratase; MaoC domain protein dehydratase complement(3044431..3044895) Acidovorax ebreus TPSY 7384976 YP_002554300.1 CDS Dtpsy_2866 NC_011992.1 3044978 3045598 R PFAM: Cobyrinic acid ac-diamide synthase; KEGG: ajs:Ajs_3543 cobyrinic acid a,c-diamide synthase; Cobyrinic acid ac-diamide synthase complement(3044978..3045598) Acidovorax ebreus TPSY 7384977 YP_002554301.1 CDS Dtpsy_2867 NC_011992.1 3045746 3046384 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: ajs:Ajs_3544 lysine exporter protein LysE/YggA; Lysine exporter protein (LYSE/YGGA) complement(3045746..3046384) Acidovorax ebreus TPSY 7384978 YP_002554302.1 CDS Dtpsy_2868 NC_011992.1 3046671 3048542 D transport system that facilitates potassium-efflux; glutathione-regulated potassium-efflux system protein KefC 3046671..3048542 Acidovorax ebreus TPSY 7384979 YP_002554303.1 CDS Dtpsy_2869 NC_011992.1 3048665 3049657 R PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_3546 hypothetical protein; hypothetical protein complement(3048665..3049657) Acidovorax ebreus TPSY 7384980 YP_002554304.1 CDS Dtpsy_2870 NC_011992.1 3049746 3050546 R KEGG: ajs:Ajs_3547 3-oxoadipate enol-lactonase; TIGRFAM: 3-oxoadipate enol-lactonase; PFAM: alpha/beta hydrolase fold; 3-oxoadipate enol-lactonase complement(3049746..3050546) Acidovorax ebreus TPSY 7384981 YP_002554305.1 CDS Dtpsy_2871 NC_011992.1 3050574 3051785 R KEGG: ajs:Ajs_3548 beta-ketoadipyl CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferase; beta-ketoadipyl CoA thiolase; PFAM: Thiolase; beta-ketoadipyl CoA thiolase complement(3050574..3051785) Acidovorax ebreus TPSY 7384982 YP_002554306.1 CDS Dtpsy_2872 NC_011992.1 3051861 3052514 R KEGG: ajs:Ajs_3549 butyryl-CoA:acetate CoA transferase; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase, B subunit complement(3051861..3052514) Acidovorax ebreus TPSY 7384983 YP_002554307.1 CDS Dtpsy_2873 NC_011992.1 3052542 3053237 R KEGG: ajs:Ajs_3550 3-oxoacid CoA-transferase, A subunit; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase, A subunit complement(3052542..3053237) Acidovorax ebreus TPSY 7384984 YP_002554308.1 CDS Dtpsy_2874 NC_011992.1 3053353 3054156 D KEGG: ajs:Ajs_3551 IclR family transcriptional regulator; TIGRFAM: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; transcriptional regulator, IclR family 3053353..3054156 Acidovorax ebreus TPSY 7384985 YP_002554309.1 CDS Dtpsy_2875 NC_011992.1 3054223 3054444 R KEGG: pna:Pnap_0863 hypothetical protein; hypothetical protein complement(3054223..3054444) Acidovorax ebreus TPSY 7384986 YP_002554310.1 CDS Dtpsy_2876 NC_011992.1 3054595 3055029 D PFAM: Domain of unknown function DUF1841; KEGG: ajs:Ajs_3553 hypothetical protein; hypothetical protein 3054595..3055029 Acidovorax ebreus TPSY 7384987 YP_002554311.1 CDS Dtpsy_2877 NC_011992.1 3054990 3055892 R PFAM: UspA domain protein; KEGG: ajs:Ajs_3554 UspA domain-containing protein; UspA domain protein complement(3054990..3055892) Acidovorax ebreus TPSY 7384988 YP_002554312.1 CDS Dtpsy_2878 NC_011992.1 3056352 3057011 R PFAM: cytochrome c class I; KEGG: ajs:Ajs_3555 cytochrome c, class I; cytochrome c class I complement(3056352..3057011) Acidovorax ebreus TPSY 7384989 YP_002554313.1 CDS Dtpsy_2879 NC_011992.1 3057120 3057962 D PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: ajs:Ajs_3556 ATPase central domain-containing protein; ATPase associated with various cellular activities AAA_5 3057120..3057962 Acidovorax ebreus TPSY 7384990 YP_002554314.1 CDS Dtpsy_2880 NC_011992.1 3057976 3058203 D KEGG: ajs:Ajs_3557 hypothetical protein; hypothetical protein 3057976..3058203 Acidovorax ebreus TPSY 7384991 YP_002554315.1 CDS Dtpsy_2881 NC_011992.1 3058221 3058823 D PFAM: GCN5-related N-acetyltransferase; KEGG: ajs:Ajs_3558 GCN5-related N-acetyltransferase; GCN5-related N-acetyltransferase 3058221..3058823 Acidovorax ebreus TPSY 7384992 YP_002554316.1 CDS Dtpsy_2882 NC_011992.1 3058842 3060029 D KEGG: ajs:Ajs_3559 hypothetical protein; hypothetical protein 3058842..3060029 Acidovorax ebreus TPSY 7384993 YP_002554317.1 CDS Dtpsy_2883 NC_011992.1 3060035 3061939 D PFAM: surface antigen (D15); KEGG: ajs:Ajs_3560 surface antigen (D15); surface antigen (D15) 3060035..3061939 Acidovorax ebreus TPSY 7384994 YP_002554318.1 CDS Dtpsy_2884 NC_011992.1 3062047 3066183 D PFAM: protein of unknown function DUF490; KEGG: ajs:Ajs_3561 hypothetical protein; protein of unknown function DUF490 3062047..3066183 Acidovorax ebreus TPSY 7384995 YP_002554319.1 CDS Dtpsy_2885 NC_011992.1 3066394 3066756 R KEGG: ajs:Ajs_3562 hypothetical protein; hypothetical protein complement(3066394..3066756) Acidovorax ebreus TPSY 7384070 YP_002554320.1 CDS Dtpsy_2886 NC_011992.1 3067046 3068449 R PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase; KEGG: ajs:Ajs_3563 cardiolipin synthetase 2; phospholipase D/Transphosphatidylase complement(3067046..3068449) Acidovorax ebreus TPSY 7384071 YP_002554321.1 CDS Dtpsy_2887 NC_011992.1 3068782 3069138 R TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: ajs:Ajs_3564 arsenate reductase; arsenate reductase complement(3068782..3069138) Acidovorax ebreus TPSY 7384072 YP_002554322.1 CDS Dtpsy_2888 NC_011992.1 3069207 3070841 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_3565 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component complement(3069207..3070841) Acidovorax ebreus TPSY 7384073 YP_002554323.1 CDS Dtpsy_2889 NC_011992.1 3071076 3072152 D PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ajs:Ajs_3566 ABC transporter related; ABC transporter related 3071076..3072152 Acidovorax ebreus TPSY 7384074 YP_002554324.1 CDS Dtpsy_2890 NC_011992.1 3072196 3073422 R PFAM: protein of unknown function DUF1282; KEGG: ajs:Ajs_3567 hypothetical protein; protein of unknown function DUF1282 complement(3072196..3073422) Acidovorax ebreus TPSY 7384075 YP_002554325.1 CDS Dtpsy_2891 NC_011992.1 3073553 3074293 R PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: ajs:Ajs_3568 lyso-ornithine lipid acyltransferase; phospholipid/glycerol acyltransferase complement(3073553..3074293) Acidovorax ebreus TPSY 7384076 YP_002554326.1 CDS Dtpsy_2892 NC_011992.1 3074313 3075608 R PFAM: amidohydrolase; KEGG: ajs:Ajs_3569 dihydroorotase; amidohydrolase complement(3074313..3075608) Acidovorax ebreus TPSY 7384077 YP_002554327.1 CDS pyrB NC_011992.1 3075821 3076783 R catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit complement(3075821..3076783) Acidovorax ebreus TPSY 7384078 YP_002554328.1 CDS Dtpsy_2894 NC_011992.1 3076786 3077319 R PFAM: phosphoribosyltransferase; KEGG: ajs:Ajs_3571 phosphoribosyltransferase; phosphoribosyltransferase complement(3076786..3077319) Acidovorax ebreus TPSY 7384079 YP_002554329.1 CDS Dtpsy_2895 NC_011992.1 3077316 3077735 R similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein complement(3077316..3077735) Acidovorax ebreus TPSY 7384080 YP_002554330.1 CDS Dtpsy_2896 NC_011992.1 3077732 3078331 R PFAM: protein of unknown function DUF179; KEGG: ajs:Ajs_3573 hypothetical protein; protein of unknown function DUF179 complement(3077732..3078331) Acidovorax ebreus TPSY 7384081 YP_002554331.1 CDS Dtpsy_2897 NC_011992.1 3078457 3084537 R PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; SMART: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; KEGG: ajs:Ajs_3574 CheA signal transduction histidine kinases; CheA signal transduction histidine kinase complement(3078457..3084537) Acidovorax ebreus TPSY 7384082 YP_002554332.1 CDS Dtpsy_2898 NC_011992.1 3084584 3086848 R PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: ajs:Ajs_3575 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(3084584..3086848) Acidovorax ebreus TPSY 7384083 YP_002554333.1 CDS Dtpsy_2899 NC_011992.1 3086870 3087397 R PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: ajs:Ajs_3576 putative CheW protein; CheW protein complement(3086870..3087397) Acidovorax ebreus TPSY 7384084 YP_002554334.1 CDS Dtpsy_2900 NC_011992.1 3087414 3087779 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: ajs:Ajs_3577 response regulator receiver protein; response regulator receiver protein complement(3087414..3087779) Acidovorax ebreus TPSY 7384085 YP_002554335.1 CDS Dtpsy_2901 NC_011992.1 3087791 3088183 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: ajs:Ajs_3578 response regulator receiver protein; response regulator receiver protein complement(3087791..3088183) Acidovorax ebreus TPSY 7384086 YP_002554336.1 CDS Dtpsy_2902 NC_011992.1 3088235 3088387 R PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: ajs:Ajs_3579 rubredoxin-type Fe(Cys)4 protein; Rubredoxin-type Fe(Cys)4 protein complement(3088235..3088387) Acidovorax ebreus TPSY 7384087 YP_002554337.1 CDS Dtpsy_2903 NC_011992.1 3088503 3089447 D PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: ajs:Ajs_3580 phosphomethylpyrimidine kinase type-1; Phosphomethylpyrimidine kinase type-1 3088503..3089447 Acidovorax ebreus TPSY 7384088 YP_002554338.1 CDS Dtpsy_2904 NC_011992.1 3089431 3090735 D Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 3089431..3090735 Acidovorax ebreus TPSY 7384089 YP_002554339.1 CDS Dtpsy_2905 NC_011992.1 3090858 3092678 D KEGG: ajs:Ajs_3582 alkaline phosphatase; Alkaline phosphatase 3090858..3092678 Acidovorax ebreus TPSY 7384090 YP_002554340.1 CDS Dtpsy_2906 NC_011992.1 3092764 3093231 R PFAM: cytochrome c class I; KEGG: ajs:Ajs_3583 cytochrome c, class I; cytochrome c class I complement(3092764..3093231) Acidovorax ebreus TPSY 7384091 YP_002554341.1 CDS purH NC_011992.1 3093251 3094852 R involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase complement(3093251..3094852) Acidovorax ebreus TPSY 7384092 YP_002554342.1 CDS Dtpsy_2908 NC_011992.1 3094935 3095168 R PFAM: helix-turn-helix Fis-type; KEGG: ajs:Ajs_3585 DNA-binding protein fis; transcriptional regulator, Fis family complement(3094935..3095168) Acidovorax ebreus TPSY 7384093 YP_002554343.1 CDS Dtpsy_2909 NC_011992.1 3095149 3096210 R TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; KEGG: ajs:Ajs_3586 nifR3 family TIM-barrel protein; TIM-barrel protein, nifR3 family complement(3095149..3096210) Acidovorax ebreus TPSY 7384094 YP_002554344.1 CDS Dtpsy_2910 NC_011992.1 3096368 3096913 D KEGG: ajs:Ajs_3587 hypothetical protein; hypothetical protein 3096368..3096913 Acidovorax ebreus TPSY 7384095 YP_002554345.1 CDS Dtpsy_2911 NC_011992.1 3096936 3097907 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: dac:Daci_2834 LysR family transcriptional regulator; transcriptional regulator, LysR family complement(3096936..3097907) Acidovorax ebreus TPSY 7384096 YP_002554346.1 CDS Dtpsy_2912 NC_011992.1 3098110 3099123 D PFAM: conserved hypothetical protein; KEGG: dac:Daci_2833 hypothetical protein; hypothetical protein 3098110..3099123 Acidovorax ebreus TPSY 7384097 YP_002554347.1 CDS Dtpsy_2913 NC_011992.1 3099138 3100556 D TIGRFAM: amidohydrolase; PFAM: peptidase dimerisation domain protein; KEGG: dac:Daci_2832 amidohydrolase; amidohydrolase 3099138..3100556 Acidovorax ebreus TPSY 7384098 YP_002554348.1 CDS Dtpsy_2914 NC_011992.1 3100674 3101483 R TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_2966 phosphonate ABC transporter, inner membrane subunit; phosphonate ABC transporter, inner membrane subunit complement(3100674..3101483) Acidovorax ebreus TPSY 7384099 YP_002554349.1 CDS Dtpsy_2915 NC_011992.1 3101544 3102488 R TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; phosphonate ABC transporter, periplasmic phosphonate binding protein; KEGG: vei:Veis_2965 phosphonate ABC transporter, periplasmic phosphonate-binding protein; phosphonate ABC transporter, periplasmic phosphonate binding protein complement(3101544..3102488) Acidovorax ebreus TPSY 7384100 YP_002554350.1 CDS Dtpsy_2916 NC_011992.1 3102531 3103385 R KEGG: vei:Veis_2964 phosphonate ABC transporter, ATPase subunit; TIGRFAM: phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; phosphonate ABC transporter, ATPase subunit complement(3102531..3103385) Acidovorax ebreus TPSY 7384101 YP_002554351.1 CDS Dtpsy_2917 NC_011992.1 3103493 3104644 R TIGRFAM: phosphonate metabolism protein PhnM; PFAM: Amidohydrolase 3; KEGG: vei:Veis_2963 phosphonate metabolism protein PhnM; phosphonate metabolism protein PhnM complement(3103493..3104644) Acidovorax ebreus TPSY 7384102 YP_002554352.1 CDS Dtpsy_2918 NC_011992.1 3104641 3105357 R KEGG: vei:Veis_2962 phosphonate C-P lyase system protein PhnL; TIGRFAM: phosphonate C-P lyase system protein PhnL; PFAM: ABC transporter related; SMART: AAA ATPase; phosphonate C-P lyase system protein PhnL complement(3104641..3105357) Acidovorax ebreus TPSY 7384103 YP_002554353.1 CDS phnK NC_011992.1 3105354 3106142 R KEGG: vei:Veis_2961 phosphonates transport ATP-binding protein; TIGRFAM: phosphonate C-P lyase system protein PhnK; PFAM: ABC transporter related; SMART: AAA ATPase; phosphonate C-P lyase system protein PhnK complement(3105354..3106142) Acidovorax ebreus TPSY 7384104 YP_002554354.1 CDS Dtpsy_2920 NC_011992.1 3106139 3106597 R PFAM: GCN5-related N-acetyltransferase; KEGG: azc:AZC_3396 GCN5-related N-acetyltransferase; GCN5-related N-acetyltransferase complement(3106139..3106597) Acidovorax ebreus TPSY 7384105 YP_002554355.1 CDS Dtpsy_2921 NC_011992.1 3106594 3107511 R PFAM: phosphonate metabolism PhnJ; KEGG: vei:Veis_2960 phosphonate metabolism PhnJ; phosphonate metabolism PhnJ complement(3106594..3107511) Acidovorax ebreus TPSY 7384106 YP_002554356.1 CDS Dtpsy_2922 NC_011992.1 3107508 3108620 R PFAM: phosphonate metabolism; KEGG: vei:Veis_2959 phosphonate metabolism; phosphonate metabolism complement(3107508..3108620) Acidovorax ebreus TPSY 7384107 YP_002554357.1 CDS Dtpsy_2923 NC_011992.1 3108623 3109243 R TIGRFAM: phosphonate C-P lyase system protein PhnH; PFAM: phosphonate metabolism; KEGG: vei:Veis_2958 phosphonate metabolism; phosphonate C-P lyase system protein PhnH complement(3108623..3109243) Acidovorax ebreus TPSY 7384108 YP_002554358.1 CDS Dtpsy_2924 NC_011992.1 3109240 3109752 R TIGRFAM: phosphonate C-P lyase system protein PhnG; PFAM: phosphonate metabolism PhnG; KEGG: vei:Veis_2957 putative phosphonate metabolism PhnG protein; phosphonate C-P lyase system protein PhnG complement(3109240..3109752) Acidovorax ebreus TPSY 7384109 YP_002554359.1 CDS Dtpsy_2925 NC_011992.1 3109828 3110592 D KEGG: reh:H16_B1289 regulator of phosphonate operon, GntR-family; TIGRFAM: phosphonates metabolism transcriptional regulator PhnF; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; SMART: regulatory protein GntR HTH; phophonate C-P lyase system transcriptional regulator PhnF, GntR family 3109828..3110592 Acidovorax ebreus TPSY 7384110 YP_002554360.1 CDS Dtpsy_2926 NC_011992.1 3110585 3111298 D PFAM: protein of unknown function DUF1045; KEGG: vei:Veis_2956 protein of unknown function DUF1045; protein of unknown function DUF1045 3110585..3111298 Acidovorax ebreus TPSY 7384111 YP_002554361.1 CDS Dtpsy_2927 NC_011992.1 3111295 3111876 D TIGRFAM: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; SMART: guanylate kinase/L-type calcium channel region; KEGG: vei:Veis_2955 phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN 3111295..3111876 Acidovorax ebreus TPSY 7384112 YP_002554362.1 CDS Dtpsy_2928 NC_011992.1 3111961 3113055 R TIGRFAM: GTP-binding protein YchF; PFAM: GTP-binding protein HSR1-related; Protein of unknown function DUF933; KEGG: ajs:Ajs_3618 GTP-binding protein YchF; GTP-binding protein YchF complement(3111961..3113055) Acidovorax ebreus TPSY 7384113 YP_002554363.1 CDS Dtpsy_2929 NC_011992.1 3113179 3114048 R PFAM: MOSC domain containing protein; MOSC domain protein beta barrel domain protein; KEGG: ajs:Ajs_3619 MOSC domain-containing protein; MOSC domain protein beta barrel domain protein complement(3113179..3114048) Acidovorax ebreus TPSY 7384114 YP_002554364.1 CDS Dtpsy_2930 NC_011992.1 3114150 3115289 D TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; KEGG: ajs:Ajs_3620 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 3114150..3115289 Acidovorax ebreus TPSY 7384115 YP_002554365.1 CDS Dtpsy_2931 NC_011992.1 3115332 3116042 D PFAM: Thioredoxin, conserved site; KEGG: ajs:Ajs_3621 thiol:disulfide interchange protein DsbC; Thioredoxin, conserved site 3115332..3116042 Acidovorax ebreus TPSY 7384116 YP_002554366.1 CDS Dtpsy_2932 NC_011992.1 3116210 3117991 D PFAM: peptidase M61 domain protein; KEGG: ajs:Ajs_3622 peptidase M61 domain-containing protein; peptidase M61 domain protein 3116210..3117991 Acidovorax ebreus TPSY 7384117 YP_002554367.1 CDS Dtpsy_2933 NC_011992.1 3118042 3118821 D PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ajs:Ajs_3623 short chain enoyl-CoA hydratase; Enoyl-CoA hydratase/isomerase 3118042..3118821 Acidovorax ebreus TPSY 7384118 YP_002554368.1 CDS Dtpsy_2934 NC_011992.1 3119027 3119476 D KEGG: ajs:Ajs_3624 hypothetical protein; hypothetical protein 3119027..3119476 Acidovorax ebreus TPSY 7384120 YP_002554369.1 CDS Dtpsy_2935 NC_011992.1 3119614 3120960 D catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 3119614..3120960 Acidovorax ebreus TPSY 7384121 YP_002554370.1 CDS Dtpsy_2936 NC_011992.1 3121083 3122462 R KEGG: ajs:Ajs_3626 signal recognition particle subunit FFH/SRP54 (SRP54); TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; signal recognition particle protein complement(3121083..3122462) Acidovorax ebreus TPSY 7384122 YP_002554371.1 CDS Dtpsy_2937 NC_011992.1 3122554 3123354 D PFAM: cytochrome c assembly protein; KEGG: ajs:Ajs_3627 cytochrome c assembly protein; cytochrome c assembly protein 3122554..3123354 Acidovorax ebreus TPSY 7384123 YP_002554372.1 CDS Dtpsy_2938 NC_011992.1 3123351 3123581 D KEGG: ajs:Ajs_3628 hypothetical protein; hypothetical protein 3123351..3123581 Acidovorax ebreus TPSY 7384124 YP_002554373.1 CDS Dtpsy_2939 NC_011992.1 3123586 3125286 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ajs:Ajs_3629 integral membrane sensor signal transduction histidine kinase; histidine kinase 3123586..3125286 Acidovorax ebreus TPSY 7384125 YP_002554374.1 CDS Dtpsy_2940 NC_011992.1 3125302 3126810 D PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: ajs:Ajs_3630 two component, sigma54 specific, fis family transcriptional regulator; two component, sigma54 specific, transcriptional regulator, Fis family 3125302..3126810 Acidovorax ebreus TPSY 7384126 YP_002554375.1 CDS Dtpsy_2941 NC_011992.1 3126791 3127390 D PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: ajs:Ajs_3631 N-acetyl-anhydromuranmyl-L-alanine amidase; N-acetyl-anhydromuranmyl-L-alanine amidase 3126791..3127390 Acidovorax ebreus TPSY 7384127 YP_002554376.1 CDS Dtpsy_2942 NC_011992.1 3127747 3130671 D Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 3127747..3130671 Acidovorax ebreus TPSY 7384128 YP_002554377.1 CDS Dtpsy_2943 NC_011992.1 3130810 3132000 D Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit beta 3130810..3132000 Acidovorax ebreus TPSY 7384129 YP_002554378.1 CDS Dtpsy_2944 NC_011992.1 3132181 3132819 D KEGG: ajs:Ajs_3634 histone protein; histone protein 3132181..3132819 Acidovorax ebreus TPSY 7384130 YP_002554379.1 CDS Dtpsy_2945 NC_011992.1 3132916 3133812 R PFAM: PfkB domain protein; KEGG: ajs:Ajs_3635 ribokinase-like domain-containing protein; PfkB domain protein complement(3132916..3133812) Acidovorax ebreus TPSY 7384131 YP_002554380.1 CDS Dtpsy_2946 NC_011992.1 3133838 3135175 R TIGRFAM: MJ0042 family finger-like protein; KEGG: ajs:Ajs_3636 zinc finger-domain-containing protein; MJ0042 family finger-like protein complement(3133838..3135175) Acidovorax ebreus TPSY 7384132 YP_002554381.1 CDS prmA NC_011992.1 3135239 3136132 R methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; ribosomal protein L11 methyltransferase complement(3135239..3136132) Acidovorax ebreus TPSY 7384133 YP_002554382.1 CDS Dtpsy_2948 NC_011992.1 3136217 3137566 R TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: ajs:Ajs_3638 acetyl-CoA carboxylase, biotin carboxylase; acetyl-CoA carboxylase, biotin carboxylase complement(3136217..3137566) Acidovorax ebreus TPSY 7384134 YP_002554383.1 CDS Dtpsy_2949 NC_011992.1 3137680 3138144 R TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: ajs:Ajs_3639 biotin carboxyl carrier protein; acetyl-CoA carboxylase, biotin carboxyl carrier protein complement(3137680..3138144) Acidovorax ebreus TPSY 7384135 YP_002554384.1 CDS Dtpsy_2950 NC_011992.1 3138255 3138842 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: ajs:Ajs_3640 redoxin domain-containing protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen complement(3138255..3138842) Acidovorax ebreus TPSY 7384136 YP_002554385.1 CDS Dtpsy_2951 NC_011992.1 3138839 3139450 R KEGG: ajs:Ajs_3641 hypothetical protein; hypothetical protein complement(3138839..3139450) Acidovorax ebreus TPSY 7384137 YP_002554386.1 CDS Dtpsy_2952 NC_011992.1 3139667 3141091 D TIGRFAM: UDP-N-acetylmuramate; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: ajs:Ajs_3642 UDP-N-acetylmuramate; UDP-N-acetylmuramate 3139667..3141091 Acidovorax ebreus TPSY 7384138 YP_002554387.1 CDS Dtpsy_2953 NC_011992.1 3141140 3141451 R KEGG: ajs:Ajs_3643 hypothetical protein; hypothetical protein complement(3141140..3141451) Acidovorax ebreus TPSY 7384139 YP_002554388.1 CDS Dtpsy_2954 NC_011992.1 3141546 3142664 R catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase complement(3141546..3142664) Acidovorax ebreus TPSY 7384140 YP_002554389.1 CDS Dtpsy_2955 NC_011992.1 3142920 3143468 R KEGG: ajs:Ajs_3645 hypothetical protein; hypothetical protein complement(3142920..3143468) Acidovorax ebreus TPSY 7384141 YP_002554390.1 CDS Dtpsy_2956 NC_011992.1 3143491 3144951 R PFAM: peptidase U62 modulator of DNA gyrase; KEGG: ajs:Ajs_3646 microcin-processing peptidase 2; peptidase U62 modulator of DNA gyrase complement(3143491..3144951) Acidovorax ebreus TPSY 7384142 YP_002554391.1 CDS Dtpsy_2957 NC_011992.1 3145013 3146185 R TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: ajs:Ajs_3647 rod shape-determining protein RodA; rod shape-determining protein RodA complement(3145013..3146185) Acidovorax ebreus TPSY 7384143 YP_002554392.1 CDS Dtpsy_2959 NC_011992.1 3148758 3149345 D PFAM: protein of unknown function UPF0227; KEGG: ajs:Ajs_3649 hypothetical protein; protein of unknown function UPF0227 3148758..3149345 Acidovorax ebreus TPSY 7384145 YP_002554393.1 CDS Dtpsy_2960 NC_011992.1 3149346 3150899 R PFAM: O-antigen polymerase; KEGG: ajs:Ajs_3650 O-antigen polymerase; O-antigen polymerase complement(3149346..3150899) Acidovorax ebreus TPSY 7384146 YP_002554394.1 CDS Dtpsy_2961 NC_011992.1 3151046 3151387 R PFAM: cytochrome c class I; KEGG: ajs:Ajs_3651 cytochrome c, class I; cytochrome c class I complement(3151046..3151387) Acidovorax ebreus TPSY 7384147 YP_002554395.1 CDS Dtpsy_2962 NC_011992.1 3151513 3152103 R KEGG: ajs:Ajs_3652 hypothetical protein; hypothetical protein complement(3151513..3152103) Acidovorax ebreus TPSY 7384148 YP_002554396.1 CDS Dtpsy_2963 NC_011992.1 3152212 3152943 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: ajs:Ajs_3653 ECF subfamily RNA polymerase sigma-24 factor; RNA polymerase, sigma-24 subunit, ECF subfamily complement(3152212..3152943) Acidovorax ebreus TPSY 7384149 YP_002554397.1 CDS Dtpsy_2964 NC_011992.1 3153072 3155243 D PFAM: ribonuclease II; KEGG: ajs:Ajs_3654 ribonuclease II; ribonuclease II 3153072..3155243 Acidovorax ebreus TPSY 7384150 YP_002554398.1 CDS Dtpsy_2965 NC_011992.1 3155323 3156183 D TIGRFAM: TonB family protein; KEGG: ajs:Ajs_3655 TonB family protein; TonB family protein 3155323..3156183 Acidovorax ebreus TPSY 7382856 YP_002554399.1 CDS aroE NC_011992.1 3156183 3157031 D AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 3156183..3157031 Acidovorax ebreus TPSY 7385411 YP_002554400.1 CDS Dtpsy_2967 NC_011992.1 3157059 3157757 D TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: glycosyl transferase family 51; KEGG: ajs:Ajs_3657 monofunctional biosynthetic peptidoglycan transglycosylase; monofunctional biosynthetic peptidoglycan transglycosylase 3157059..3157757 Acidovorax ebreus TPSY 7385412 YP_002554401.1 CDS ruvC NC_011992.1 3157837 3158397 D endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 3157837..3158397 Acidovorax ebreus TPSY 7385413 YP_002554402.1 CDS Dtpsy_2969 NC_011992.1 3158434 3160086 R PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; SMART: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: ajs:Ajs_3659 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(3158434..3160086) Acidovorax ebreus TPSY 7385414 YP_002554403.1 CDS Dtpsy_2970 NC_011992.1 3160340 3161965 D PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; SMART: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: ajs:Ajs_3660 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3160340..3161965 Acidovorax ebreus TPSY 7385415 YP_002554404.1 CDS Dtpsy_2971 NC_011992.1 3162017 3163861 R required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC complement(3162017..3163861) Acidovorax ebreus TPSY 7385416 YP_002554405.1 CDS Dtpsy_2972 NC_011992.1 3164106 3164282 R KEGG: ajs:Ajs_3662 hypothetical protein; hypothetical protein complement(3164106..3164282) Acidovorax ebreus TPSY 7385417 YP_002554406.1 CDS lpxC NC_011992.1 3164301 3165224 R zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase complement(3164301..3165224) Acidovorax ebreus TPSY 7385418 YP_002554407.1 CDS Dtpsy_2974 NC_011992.1 3165445 3167184 D PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; SMART: chemotaxis sensory transducer; KEGG: ajs:Ajs_3664 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer with Cache sensor 3165445..3167184 Acidovorax ebreus TPSY 7385419 YP_002554408.1 CDS Dtpsy_2975 NC_011992.1 3167326 3168555 R TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ domain protein; KEGG: ajs:Ajs_3665 cell division protein FtsZ; cell division protein FtsZ complement(3167326..3168555) Acidovorax ebreus TPSY 7385420 YP_002554409.1 CDS Dtpsy_2976 NC_011992.1 3168718 3169947 R TIGRFAM: cell division protein FtsA; PFAM: cell division protein FtsA; KEGG: ajs:Ajs_3666 cell division protein FtsA; cell division protein FtsA complement(3168718..3169947) Acidovorax ebreus TPSY 7385421 YP_002554410.1 CDS Dtpsy_2977 NC_011992.1 3169965 3170798 R PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein FtsQ-type; KEGG: ajs:Ajs_3667 polypeptide-transport-associated domain-containing protein; cell division protein FtsQ complement(3169965..3170798) Acidovorax ebreus TPSY 7385422 YP_002554411.1 CDS ddl NC_011992.1 3170795 3171793 R D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase complement(3170795..3171793) Acidovorax ebreus TPSY 7385423 YP_002554412.1 CDS murC NC_011992.1 3171790 3173223 R Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase complement(3171790..3173223) Acidovorax ebreus TPSY 7385424 YP_002554413.1 CDS murG NC_011992.1 3173220 3174419 R UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase complement(3173220..3174419) Acidovorax ebreus TPSY 7385425 YP_002554414.1 CDS Dtpsy_2981 NC_011992.1 3174514 3175794 R TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: ajs:Ajs_3671 cell division protein FtsW; cell division protein FtsW complement(3174514..3175794) Acidovorax ebreus TPSY 7385426 YP_002554415.1 CDS murD NC_011992.1 3175791 3177689 R UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase complement(3175791..3177689) Acidovorax ebreus TPSY 7385427 YP_002554416.1 CDS mraY NC_011992.1 3177686 3178864 R First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(3177686..3178864) Acidovorax ebreus TPSY 7385428 YP_002554417.1 CDS Dtpsy_2984 NC_011992.1 3178855 3180303 R TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: ajs:Ajs_3674 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase complement(3178855..3180303) Acidovorax ebreus TPSY 7385429 YP_002554418.1 CDS murE NC_011992.1 3180300 3181805 R involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase complement(3180300..3181805) Acidovorax ebreus TPSY 7385430 YP_002554419.1 CDS Dtpsy_2986 NC_011992.1 3181802 3183550 R PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: ajs:Ajs_3676 peptidoglycan synthetase FtsI; Peptidoglycan glycosyltransferase complement(3181802..3183550) Acidovorax ebreus TPSY 7385431 YP_002554420.1 CDS Dtpsy_2987 NC_011992.1 3183547 3183849 R TIGRFAM: cell division protein FtsL; PFAM: cell division protein FtsL; KEGG: ajs:Ajs_3677 cell division protein FtsL; cell division protein FtsL complement(3183547..3183849) Acidovorax ebreus TPSY 7385432 YP_002554421.1 CDS mraW NC_011992.1 3183959 3184885 R TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: ajs:Ajs_3678 S-adenosyl-methyltransferase MraW; S-adenosyl-methyltransferase MraW complement(3183959..3184885) Acidovorax ebreus TPSY 7385433 YP_002554422.1 CDS Dtpsy_2989 NC_011992.1 3184895 3185323 R MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ complement(3184895..3185323) Acidovorax ebreus TPSY 7385434 YP_002554423.1 CDS hslU NC_011992.1 3185588 3186928 R heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU complement(3185588..3186928) Acidovorax ebreus TPSY 7385435 YP_002554424.1 CDS Dtpsy_2991 NC_011992.1 3187024 3187569 R heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit complement(3187024..3187569) Acidovorax ebreus TPSY 7385436 YP_002554425.1 CDS Dtpsy_2992 NC_011992.1 3187663 3189471 R KEGG: ajs:Ajs_3682 hypothetical protein; hypothetical protein complement(3187663..3189471) Acidovorax ebreus TPSY 7385437 YP_002554426.1 CDS Dtpsy_2993 NC_011992.1 3189525 3190196 R TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: ajs:Ajs_3683 TraR/DksA family transcriptional regulator; transcriptional regulator, TraR/DksA family complement(3189525..3190196) Acidovorax ebreus TPSY 7385438 YP_002554427.1 CDS Dtpsy_2994 NC_011992.1 3190394 3191512 R PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: ajs:Ajs_3684 cobalamin synthesis protein, P47K; cobalamin synthesis protein P47K complement(3190394..3191512) Acidovorax ebreus TPSY 7385439 YP_002554428.1 CDS Dtpsy_2995 NC_011992.1 3191620 3192807 R KEGG: ajs:Ajs_3685 SAM-dependent methyltransferase; SAM-dependent methyltransferase complement(3191620..3192807) Acidovorax ebreus TPSY 7385440 YP_002554429.1 CDS Dtpsy_2996 NC_011992.1 3192898 3193869 R TIGRFAM: tyrosine recombinase XerC; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: ajs:Ajs_3686 tyrosine recombinase XerC; tyrosine recombinase XerC complement(3192898..3193869) Acidovorax ebreus TPSY 7385441 YP_002554430.1 CDS Dtpsy_2997 NC_011992.1 3193969 3194661 R PFAM: protein of unknown function DUF484; KEGG: ajs:Ajs_3687 hypothetical protein; protein of unknown function DUF484 complement(3193969..3194661) Acidovorax ebreus TPSY 7385442 YP_002554431.1 CDS dapF NC_011992.1 3194658 3195536 R involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase complement(3194658..3195536) Acidovorax ebreus TPSY 7385443 YP_002554432.1 CDS Dtpsy_2999 NC_011992.1 3195730 3195927 D KEGG: ajs:Ajs_3689 hypothetical protein; hypothetical protein 3195730..3195927 Acidovorax ebreus TPSY 7385444 YP_002554433.1 CDS Dtpsy_3000 NC_011992.1 3196010 3196210 D KEGG: ajs:Ajs_3690 hypothetical protein; hypothetical protein 3196010..3196210 Acidovorax ebreus TPSY 7385445 YP_002554434.1 CDS Dtpsy_3001 NC_011992.1 3196245 3197951 D PFAM: NUDIX hydrolase; beta-lactamase domain protein; KEGG: ajs:Ajs_3691 beta-lactamase domain-containing protein; beta-lactamase domain protein 3196245..3197951 Acidovorax ebreus TPSY 7385446 YP_002554435.1 CDS Dtpsy_3002 NC_011992.1 3197944 3198744 D PFAM: RNA-binding S4 domain protein; KEGG: ajs:Ajs_3692 RNA-binding S4 domain-containing protein; RNA-binding S4 domain protein 3197944..3198744 Acidovorax ebreus TPSY 7385447 YP_002554436.1 CDS Dtpsy_3003 NC_011992.1 3198892 3200151 D PFAM: protein of unknown function DUF898 transmembrane; KEGG: ajs:Ajs_3720 hypothetical protein; protein of unknown function DUF898 transmembrane 3198892..3200151 Acidovorax ebreus TPSY 7385448 YP_002554437.1 CDS Dtpsy_3004 NC_011992.1 3200210 3201334 D PFAM: peptidase M48 Ste24p; KEGG: ajs:Ajs_3721 peptidase M48, Ste24p; peptidase M48 Ste24p 3200210..3201334 Acidovorax ebreus TPSY 7385449 YP_002554438.1 CDS Dtpsy_3005 NC_011992.1 3201790 3201960 R KEGG: ajs:Ajs_3722 hypothetical protein; hypothetical protein complement(3201790..3201960) Acidovorax ebreus TPSY 7385451 YP_002554439.1 CDS Dtpsy_3006 NC_011992.1 3202204 3203121 D TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: ajs:Ajs_3723 cysteine synthase; cysteine synthase A 3202204..3203121 Acidovorax ebreus TPSY 7385452 YP_002554440.1 CDS Dtpsy_3007 NC_011992.1 3203258 3204097 D PFAM: Endonuclease/exonuclease/phosphatase; KEGG: ajs:Ajs_3724 endonuclease/exonuclease/phosphatase; Endonuclease/exonuclease/phosphatase 3203258..3204097 Acidovorax ebreus TPSY 7385453 YP_002554441.1 CDS Dtpsy_3008 NC_011992.1 3204097 3205308 D SMART: phospholipase D/Transphosphatidylase; KEGG: ajs:Ajs_3725 cardiolipin synthase 2; cardiolipin synthase 2 3204097..3205308 Acidovorax ebreus TPSY 7385454 YP_002554442.1 CDS Dtpsy_3009 NC_011992.1 3205322 3206371 D KEGG: ajs:Ajs_3726 hypothetical protein; hypothetical protein 3205322..3206371 Acidovorax ebreus TPSY 7385455 YP_002554443.1 CDS Dtpsy_3010 NC_011992.1 3206474 3208255 D PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: ajs:Ajs_3727 FAD dependent oxidoreductase; FAD dependent oxidoreductase 3206474..3208255 Acidovorax ebreus TPSY 7385456 YP_002554444.1 CDS Dtpsy_3011 NC_011992.1 3208449 3209381 R PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: ajs:Ajs_3730 electron transfer flavoprotein, alpha subunit; Electron transfer flavoprotein alpha subunit complement(3208449..3209381) Acidovorax ebreus TPSY 7385457 YP_002554445.1 CDS Dtpsy_3012 NC_011992.1 3209403 3210152 R PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: ajs:Ajs_3731 electron transfer flavoprotein beta-subunit; Electron transfer flavoprotein alpha/beta-subunit complement(3209403..3210152) Acidovorax ebreus TPSY 7385458 YP_002554446.1 CDS Dtpsy_3013 NC_011992.1 3210174 3211148 R PFAM: 2-nitropropane dioxygenase NPD; KEGG: ajs:Ajs_3732 2-nitropropane dioxygenase, NPD; 2-nitropropane dioxygenase NPD complement(3210174..3211148) Acidovorax ebreus TPSY 7385459 YP_002554447.1 CDS Dtpsy_3014 NC_011992.1 3211160 3212155 R PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_3733 hypothetical protein; hypothetical protein complement(3211160..3212155) Acidovorax ebreus TPSY 7385460 YP_002554448.1 CDS Dtpsy_3015 NC_011992.1 3212226 3213461 R PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: ajs:Ajs_3734 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F complement(3212226..3213461) Acidovorax ebreus TPSY 7385461 YP_002554449.1 CDS Dtpsy_3016 NC_011992.1 3213497 3214321 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(3213497..3214321) Acidovorax ebreus TPSY 7385462 YP_002554450.1 CDS Dtpsy_3017 NC_011992.1 3214437 3215567 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_3736 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase domain protein complement(3214437..3215567) Acidovorax ebreus TPSY 7385463 YP_002554451.1 CDS Dtpsy_3018 NC_011992.1 3215593 3216804 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: ajs:Ajs_3737 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase domain protein complement(3215593..3216804) Acidovorax ebreus TPSY 7385464 YP_002554452.1 CDS Dtpsy_3019 NC_011992.1 3216815 3218014 R KEGG: ajs:Ajs_3738 acetyl-CoA acetyltransferases; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase complement(3216815..3218014) Acidovorax ebreus TPSY 7385465 YP_002554453.1 CDS Dtpsy_3020 NC_011992.1 3218157 3220274 R PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: ajs:Ajs_3739 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; 3-hydroxyacyl-CoA dehydrogenase NAD-binding complement(3218157..3220274) Acidovorax ebreus TPSY 7385466 YP_002554454.1 CDS Dtpsy_3021 NC_011992.1 3220407 3221345 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_3740 LysR family transcriptional regulator; transcriptional regulator, LysR family 3220407..3221345 Acidovorax ebreus TPSY 7385467 YP_002554455.1 CDS Dtpsy_3022 NC_011992.1 3221359 3221721 R KEGG: ajs:Ajs_3741 hypothetical protein; hypothetical protein complement(3221359..3221721) Acidovorax ebreus TPSY 7385468 YP_002554456.1 CDS Dtpsy_3023 NC_011992.1 3221816 3222694 R putative metalloprotease; heat shock protein HtpX complement(3221816..3222694) Acidovorax ebreus TPSY 7385469 YP_002554457.1 CDS Dtpsy_3024 NC_011992.1 3222822 3223595 R KEGG: ajs:Ajs_3743 putative transmembrane protein; putative transmembrane protein complement(3222822..3223595) Acidovorax ebreus TPSY 7385470 YP_002554458.1 CDS Dtpsy_3025 NC_011992.1 3223592 3224449 R PFAM: protein of unknown function DUF88; KEGG: ajs:Ajs_3744 hypothetical protein; protein of unknown function DUF88 complement(3223592..3224449) Acidovorax ebreus TPSY 7385471 YP_002554459.1 CDS Dtpsy_3026 NC_011992.1 3224484 3225536 R catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase complement(3224484..3225536) Acidovorax ebreus TPSY 7385472 YP_002554460.1 CDS Dtpsy_3027 NC_011992.1 3225666 3226175 R KEGG: ajs:Ajs_3746 hypothetical protein; hypothetical protein complement(3225666..3226175) Acidovorax ebreus TPSY 7385473 YP_002554461.1 CDS Dtpsy_3028 NC_011992.1 3226313 3232243 R KEGG: ajs:Ajs_3747 UvrA family protein; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; SMART: AAA ATPase; excinuclease ABC, A subunit complement(3226313..3232243) Acidovorax ebreus TPSY 7385474 YP_002554462.1 CDS Dtpsy_3029 NC_011992.1 3232297 3233409 D PFAM: Extracellular ligand-binding receptor; KEGG: ajs:Ajs_3748 extracellular ligand-binding receptor; Extracellular ligand-binding receptor 3232297..3233409 Acidovorax ebreus TPSY 7385475 YP_002554463.1 CDS Dtpsy_3030 NC_011992.1 3233544 3234668 D PFAM: Extracellular ligand-binding receptor; KEGG: ajs:Ajs_3749 extracellular ligand-binding receptor; Extracellular ligand-binding receptor 3233544..3234668 Acidovorax ebreus TPSY 7385476 YP_002554464.1 CDS Dtpsy_3031 NC_011992.1 3234755 3234928 R KEGG: ajs:Ajs_3750 hypothetical protein; hypothetical protein complement(3234755..3234928) Acidovorax ebreus TPSY 7385477 YP_002554465.1 CDS Dtpsy_3032 NC_011992.1 3235071 3236081 R PFAM: porin Gram-negative type; KEGG: ajs:Ajs_3751 porin; porin Gram-negative type complement(3235071..3236081) Acidovorax ebreus TPSY 7385478 YP_002554466.1 CDS Dtpsy_3033 NC_011992.1 3236320 3238014 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: ajs:Ajs_3752 major facilitator superfamily transporter; major facilitator superfamily MFS_1 complement(3236320..3238014) Acidovorax ebreus TPSY 7385479 YP_002554467.1 CDS Dtpsy_3034 NC_011992.1 3238461 3239114 R PFAM: DSBA oxidoreductase; KEGG: ajs:Ajs_3753 DsbA oxidoreductase; DSBA oxidoreductase complement(3238461..3239114) Acidovorax ebreus TPSY 7385480 YP_002554468.1 CDS Dtpsy_3035 NC_011992.1 3239111 3239395 R PFAM: protein of unknown function DUF1289; KEGG: ajs:Ajs_3754 hypothetical protein; protein of unknown function DUF1289 complement(3239111..3239395) Acidovorax ebreus TPSY 7385481 YP_002554469.1 CDS Dtpsy_3036 NC_011992.1 3239392 3239880 R PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: ajs:Ajs_3755 YbaK/prolyl-tRNA synthetase associated region; YbaK/prolyl-tRNA synthetase associated region complement(3239392..3239880) Acidovorax ebreus TPSY 7385482 YP_002554470.1 CDS Dtpsy_3037 NC_011992.1 3240206 3241726 D KEGG: ajs:Ajs_3756 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; Diverse 7TM receptor transmembrane region; SMART: GGDEF domain containing protein; 7TM domain sensor diguanylate cyclase 3240206..3241726 Acidovorax ebreus TPSY 7385483 YP_002554471.1 CDS Dtpsy_3038 NC_011992.1 3241741 3242655 R PFAM: pyruvate carboxyltransferase; KEGG: ajs:Ajs_3757 hydroxymethylglutaryl-CoA lyase; pyruvate carboxyltransferase complement(3241741..3242655) Acidovorax ebreus TPSY 7385484 YP_002554472.1 CDS Dtpsy_3039 NC_011992.1 3242684 3243604 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: ajs:Ajs_3758 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding complement(3242684..3243604) Acidovorax ebreus TPSY 7385485 YP_002554473.1 CDS Dtpsy_3040 NC_011992.1 3243643 3245661 R PFAM: biotin/lipoyl attachment domain-containing protein; phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: ajs:Ajs_3759 3-methylcrotonoyl-CoA carboxylase, alpha subunit; Carbamoyl-phosphate synthase L chain ATP-binding complement(3243643..3245661) Acidovorax ebreus TPSY 7385486 YP_002554474.1 CDS Dtpsy_3041 NC_011992.1 3245662 3246381 R KEGG: ajs:Ajs_3760 putative transmembrane protein; putative transmembrane protein complement(3245662..3246381) Acidovorax ebreus TPSY 7385487 YP_002554475.1 CDS Dtpsy_3042 NC_011992.1 3246388 3247170 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(3246388..3247170) Acidovorax ebreus TPSY 7385488 YP_002554476.1 CDS Dtpsy_3043 NC_011992.1 3247167 3247676 R PFAM: DinB family protein; KEGG: ajs:Ajs_3762 DinB family protein; DinB family protein complement(3247167..3247676) Acidovorax ebreus TPSY 7385489 YP_002554477.1 CDS Dtpsy_3044 NC_011992.1 3247687 3249291 R PFAM: carboxyl transferase; KEGG: ajs:Ajs_3763 propionyl-CoA carboxylase; Propionyl-CoA carboxylase complement(3247687..3249291) Acidovorax ebreus TPSY 7385490 YP_002554478.1 CDS Dtpsy_3045 NC_011992.1 3249306 3251042 R PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_3764 acyl-CoA synthetase; AMP-binding domain protein complement(3249306..3251042) Acidovorax ebreus TPSY 7385491 YP_002554479.1 CDS Dtpsy_3046 NC_011992.1 3251188 3252258 D PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ajs:Ajs_3765 AraC family transcriptional regulator; transcriptional regulator, AraC family 3251188..3252258 Acidovorax ebreus TPSY 7383986 YP_002554480.1 CDS Dtpsy_3047 NC_011992.1 3252318 3252998 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ajs:Ajs_0330 HAD family hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3 complement(3252318..3252998) Acidovorax ebreus TPSY 7383264 YP_002554481.1 CDS Dtpsy_3048 NC_011992.1 3252988 3255039 R KEGG: mpt:Mpe_A3496 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; SMART: GGDEF domain containing protein; diguanylate cyclase with PAS/PAC sensor complement(3252988..3255039) Acidovorax ebreus TPSY 7383265 YP_002554482.1 CDS Dtpsy_3049 NC_011992.1 3255164 3256675 D PFAM: extracellular solute-binding protein family 5; KEGG: aav:Aave_3619 extracellular solute-binding protein, family 5; extracellular solute-binding protein family 5 3255164..3256675 Acidovorax ebreus TPSY 7383266 YP_002554483.1 CDS Dtpsy_3050 NC_011992.1 3256761 3257159 R KEGG: dac:Daci_5982 hypothetical protein; hypothetical protein complement(3256761..3257159) Acidovorax ebreus TPSY 7383267 YP_002554484.1 CDS Dtpsy_3051 NC_011992.1 3257215 3257682 D PFAM: protein of unknown function DUF421; KEGG: aav:Aave_4363 hypothetical protein; protein of unknown function DUF421 3257215..3257682 Acidovorax ebreus TPSY 7383268 YP_002554485.1 CDS Dtpsy_3052 NC_011992.1 3257753 3258883 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_3774 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase domain protein complement(3257753..3258883) Acidovorax ebreus TPSY 7383269 YP_002554486.1 CDS Dtpsy_3053 NC_011992.1 3258933 3259601 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ajs:Ajs_3775 short chain dehydrogenase; short chain dehydrogenase complement(3258933..3259601) Acidovorax ebreus TPSY 7383270 YP_002554487.1 CDS Dtpsy_3054 NC_011992.1 3259704 3260894 R KEGG: ajs:Ajs_3776 acetyl-CoA acetyltransferases; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase complement(3259704..3260894) Acidovorax ebreus TPSY 7383271 YP_002554488.1 CDS aceK NC_011992.1 3260891 3262720 R catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity; unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol; bifunctional isocitrate dehydrogenase kinase/phosphatase protein complement(3260891..3262720) Acidovorax ebreus TPSY 7383272 YP_002554489.1 CDS Dtpsy_3056 NC_011992.1 3262758 3263420 R PFAM: carbonic anhydrase; KEGG: ajs:Ajs_3778 carbonate dehydratase; Carbonate dehydratase complement(3262758..3263420) Acidovorax ebreus TPSY 7383273 YP_002554490.1 CDS Dtpsy_3057 NC_011992.1 3263476 3264666 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_3779 isovaleryl-CoA dehydrogenase; acyl-CoA dehydrogenase domain protein complement(3263476..3264666) Acidovorax ebreus TPSY 7383274 YP_002554491.1 CDS Dtpsy_3058 NC_011992.1 3264796 3265206 R PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; SMART: regulatory protein MerR; KEGG: ajs:Ajs_3780 MerR family transcriptional regulator; transcriptional regulator, MerR family complement(3264796..3265206) Acidovorax ebreus TPSY 7383275 YP_002554492.1 CDS Dtpsy_3059 NC_011992.1 3271198 3273084 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_3785 ABC transporter related; ABC transporter related 3271198..3273084 Acidovorax ebreus TPSY 7383282 YP_002554493.1 CDS Dtpsy_3060 NC_011992.1 3273094 3274206 R KEGG: ajs:Ajs_3786 response regulator receiver modulated CheB methylesterase; PFAM: CheB methylesterase; response regulator receiver; SMART: response regulator receiver; response regulator receiver modulated CheB methylesterase complement(3273094..3274206) Acidovorax ebreus TPSY 7383283 YP_002554494.1 CDS Dtpsy_3061 NC_011992.1 3274244 3274858 R stimulates methylation of MCP proteins; catalyzes the conversion of glutamine residues to glutamate on methyl-accepting chemotaxis receptors; chemoreceptor glutamine deamidase CheD complement(3274244..3274858) Acidovorax ebreus TPSY 7383284 YP_002554495.1 CDS Dtpsy_3062 NC_011992.1 3275022 3275915 R KEGG: ajs:Ajs_3788 MCP methyltransferase, CheR-type; PFAM: MCP methyltransferase CheR-type; SMART: MCP methyltransferase CheR-type; MCP methyltransferase, CheR-type complement(3275022..3275915) Acidovorax ebreus TPSY 7383285 YP_002554496.1 CDS Dtpsy_3063 NC_011992.1 3275964 3276452 R PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: ajs:Ajs_3789 CheW protein; CheW protein complement(3275964..3276452) Acidovorax ebreus TPSY 7383286 YP_002554497.1 CDS Dtpsy_3064 NC_011992.1 3276486 3278618 R PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; SMART: CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; KEGG: ajs:Ajs_3790 CheA signal transduction histidine kinases; CheA signal transduction histidine kinase complement(3276486..3278618) Acidovorax ebreus TPSY 7383287 YP_002554498.1 CDS Dtpsy_3065 NC_011992.1 3278670 3279032 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: ajs:Ajs_3791 response regulator receiver protein; response regulator receiver protein complement(3278670..3279032) Acidovorax ebreus TPSY 7383288 YP_002554499.1 CDS Dtpsy_3066 NC_011992.1 3279101 3279547 R KEGG: ajs:Ajs_3792 hypothetical protein; hypothetical protein complement(3279101..3279547) Acidovorax ebreus TPSY 7383289 YP_002554500.1 CDS Dtpsy_3067 NC_011992.1 3279697 3280818 D PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: response regulator receiver; ATP-binding region ATPase domain protein; KEGG: ajs:Ajs_3793 response regulator receiver sensor signal transduction histidine kinase; response regulator receiver sensor signal transduction histidine kinase 3279697..3280818 Acidovorax ebreus TPSY 7383290 YP_002554501.1 CDS Dtpsy_3068 NC_011992.1 3280815 3281444 D PFAM: regulatory protein LuxR; response regulator receiver; SMART: regulatory protein LuxR; response regulator receiver; KEGG: ajs:Ajs_3794 two component LuxR family transcriptional regulator; two component transcriptional regulator, LuxR family 3280815..3281444 Acidovorax ebreus TPSY 7383291 YP_002554502.1 CDS Dtpsy_3069 NC_011992.1 3281543 3282286 R TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; KEGG: ajs:Ajs_3795 flagellar biosynthetic protein FliR; flagellar biosynthetic protein FliR complement(3281543..3282286) Acidovorax ebreus TPSY 7383292 YP_002554503.1 CDS Dtpsy_3070 NC_011992.1 3282319 3282588 R TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; KEGG: ajs:Ajs_3796 flagellar biosynthetic protein FliQ; flagellar biosynthetic protein FliQ complement(3282319..3282588) Acidovorax ebreus TPSY 7383293 YP_002554504.1 CDS fliP NC_011992.1 3282599 3283354 R FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP complement(3282599..3283354) Acidovorax ebreus TPSY 7383294 YP_002554505.1 CDS Dtpsy_3072 NC_011992.1 3283347 3283709 R PFAM: flagellar biosynthesis protein FliO; KEGG: ajs:Ajs_3798 flagellar biosynthesis protein, FliO; flagellar biosynthesis protein FliO complement(3283347..3283709) Acidovorax ebreus TPSY 7383295 YP_002554506.1 CDS Dtpsy_3073 NC_011992.1 3283717 3284166 R TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: ajs:Ajs_3799 flagellar motor switch protein FliN; flagellar motor switch protein FliN complement(3283717..3284166) Acidovorax ebreus TPSY 7383296 YP_002554507.1 CDS Dtpsy_3074 NC_011992.1 3284156 3285160 R TIGRFAM: flagellar motor switch protein FliM; PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: ajs:Ajs_3800 flagellar motor switch protein FliM; flagellar motor switch protein FliM complement(3284156..3285160) Acidovorax ebreus TPSY 7383297 YP_002554508.1 CDS Dtpsy_3075 NC_011992.1 3285176 3285748 R PFAM: flagellar basal body-associated protein FliL; KEGG: ajs:Ajs_3801 flagellar basal body-associated protein FliL; flagellar basal body-associated protein FliL complement(3285176..3285748) Acidovorax ebreus TPSY 7383298 YP_002554509.1 CDS Dtpsy_3076 NC_011992.1 3285956 3287266 R PFAM: flagellar hook-length control protein; KEGG: ajs:Ajs_3802 flagellar hook-length control protein; flagellar hook-length control protein complement(3285956..3287266) Acidovorax ebreus TPSY 7383299 YP_002554510.1 CDS Dtpsy_3077 NC_011992.1 3287269 3287733 R TIGRFAM: flagellar export protein FliJ; PFAM: flagellar FliJ protein; KEGG: ajs:Ajs_3803 flagellar export protein FliJ; flagellar export protein FliJ complement(3287269..3287733) Acidovorax ebreus TPSY 7383300 YP_002554511.1 CDS Dtpsy_3078 NC_011992.1 3287761 3289164 R KEGG: ajs:Ajs_3804 flagellar protein export ATPase FliI; TIGRFAM: ATPase, FliI/YscN family; ATPase FliI/YscN; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; SMART: AAA ATPase; ATPase FliI/YscN complement(3287761..3289164) Acidovorax ebreus TPSY 7383301 YP_002554512.1 CDS Dtpsy_3079 NC_011992.1 3289154 3289888 R PFAM: flagellar assembly protein FliH; KEGG: ajs:Ajs_3805 flagellar assembly protein FliH; flagellar assembly protein FliH complement(3289154..3289888) Acidovorax ebreus TPSY 7383302 YP_002554513.1 CDS Dtpsy_3080 NC_011992.1 3289898 3290893 R TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG; KEGG: ajs:Ajs_3806 flagellar motor switch protein FliG; flagellar motor switch protein FliG complement(3289898..3290893) Acidovorax ebreus TPSY 7383303 YP_002554514.1 CDS Dtpsy_3081 NC_011992.1 3290927 3292621 R TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring domain protein; KEGG: ajs:Ajs_3807 flagellar M-ring protein FliF; flagellar M-ring protein FliF complement(3290927..3292621) Acidovorax ebreus TPSY 7383304 YP_002554515.1 CDS Dtpsy_3082 NC_011992.1 3292795 3293106 D TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: ajs:Ajs_3808 flagellar hook-basal body complex subunit FliE; flagellar hook-basal body complex subunit FliE 3292795..3293106 Acidovorax ebreus TPSY 7383305 YP_002554516.1 CDS Dtpsy_3083 NC_011992.1 3293288 3293587 R KEGG: ajs:Ajs_3809 flagellar protein FliT; flagellar protein FliT complement(3293288..3293587) Acidovorax ebreus TPSY 7383306 YP_002554517.1 CDS Dtpsy_3084 NC_011992.1 3293591 3294031 R TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS; KEGG: aav:Aave_4398 flagellar protein FliS; flagellar protein FliS complement(3293591..3294031) Acidovorax ebreus TPSY 7383307 YP_002554518.1 CDS Dtpsy_3085 NC_011992.1 3294097 3295530 R PFAM: flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein; KEGG: aav:Aave_4399 flagellar hook-associated 2 domain protein; flagellar hook-associated 2 domain protein complement(3294097..3295530) Acidovorax ebreus TPSY 7383308 YP_002554519.1 CDS Dtpsy_3086 NC_011992.1 3295767 3297239 R PFAM: flagellin domain protein; KEGG: vei:Veis_4397 flagellin domain protein; flagellin domain protein complement(3295767..3297239) Acidovorax ebreus TPSY 7383309 YP_002554520.1 CDS Dtpsy_3087 NC_011992.1 3297573 3299054 D PFAM: flagellin domain protein; flagellin hook IN repeat protein; KEGG: vei:Veis_4397 flagellin domain protein; flagellin domain protein 3297573..3299054 Acidovorax ebreus TPSY 7383310 YP_002554521.1 CDS Dtpsy_3088 NC_011992.1 3299276 3300136 D PFAM: MotA/TolQ/ExbB proton channel; KEGG: ajs:Ajs_3815 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 3299276..3300136 Acidovorax ebreus TPSY 7383311 YP_002554522.1 CDS Dtpsy_3089 NC_011992.1 3300163 3301104 D PFAM: OmpA/MotB domain protein; KEGG: ajs:Ajs_3816 OmpA/MotB domain-containing protein; OmpA/MotB domain protein 3300163..3301104 Acidovorax ebreus TPSY 7383312 YP_002554523.1 CDS Dtpsy_3090 NC_011992.1 3301166 3301552 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: ajs:Ajs_3817 response regulator receiver protein; response regulator receiver protein 3301166..3301552 Acidovorax ebreus TPSY 7383313 YP_002554524.1 CDS Dtpsy_3091 NC_011992.1 3301555 3302184 D PFAM: Chemotaxis phosphatase CheZ; KEGG: ajs:Ajs_3818 chemotaxis phosphatase, CheZ; chemotaxis phosphatase, CheZ 3301555..3302184 Acidovorax ebreus TPSY 7383314 YP_002554525.1 CDS Dtpsy_3092 NC_011992.1 3302407 3303579 D PFAM: type III secretion exporter; KEGG: ajs:Ajs_3819 type III secretion exporter; type III secretion exporter 3302407..3303579 Acidovorax ebreus TPSY 7383315 YP_002554526.1 CDS Dtpsy_3093 NC_011992.1 3303576 3305660 D TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein; KEGG: ajs:Ajs_3820 flagellar biosynthesis protein FlhA; flagellar biosynthesis protein FlhA 3303576..3305660 Acidovorax ebreus TPSY 7383316 YP_002554527.1 CDS Dtpsy_3094 NC_011992.1 3305657 3307249 D KEGG: ajs:Ajs_3821 GTP-binding signal recognition particle; TIGRFAM: AAA ATPase; PFAM: GTP-binding signal recognition particle SRP54 G- domain; SMART: AAA ATPase; AAA ATPase 3305657..3307249 Acidovorax ebreus TPSY 7383317 YP_002554528.1 CDS Dtpsy_3095 NC_011992.1 3307239 3308036 D KEGG: ajs:Ajs_3822 hypothetical protein; hypothetical protein 3307239..3308036 Acidovorax ebreus TPSY 7383318 YP_002554529.1 CDS Dtpsy_3096 NC_011992.1 3308041 3308754 D KEGG: ajs:Ajs_3823 FliA/WhiG family RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; RNA polymerase, sigma 28 subunit, FliA/WhiG 3308041..3308754 Acidovorax ebreus TPSY 7383319 YP_002554530.1 CDS Dtpsy_3097 NC_011992.1 3308965 3309312 R KEGG: ajs:Ajs_3824 hypothetical protein; hypothetical protein complement(3308965..3309312) Acidovorax ebreus TPSY 7383320 YP_002554531.1 CDS Dtpsy_3098 NC_011992.1 3309369 3309692 R PFAM: Anti-sigma-28 factor FlgM family protein; KEGG: ajs:Ajs_3825 anti-sigma-28 factor, FlgM; anti-sigma-28 factor, FlgM complement(3309369..3309692) Acidovorax ebreus TPSY 7383321 YP_002554532.1 CDS Dtpsy_3099 NC_011992.1 3309786 3310538 R TIGRFAM: flagella basal body P-ring formation protein FlgA; PFAM: SAF domain protein; KEGG: ajs:Ajs_3826 SAF domain-containing protein; flagella basal body P-ring formation protein FlgA complement(3309786..3310538) Acidovorax ebreus TPSY 7383322 YP_002554533.1 CDS Dtpsy_3100 NC_011992.1 3310764 3311180 D TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: flagellar basal body rod protein; KEGG: ajs:Ajs_3827 flagellar basal-body rod protein FlgB; flagellar basal-body rod protein FlgB 3310764..3311180 Acidovorax ebreus TPSY 7383323 YP_002554534.1 CDS Dtpsy_3101 NC_011992.1 3311202 3311606 D TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: ajs:Ajs_3828 flagellar basal-body rod protein FlgC; flagellar basal-body rod protein FlgC 3311202..3311606 Acidovorax ebreus TPSY 7383324 YP_002554535.1 CDS Dtpsy_3102 NC_011992.1 3311628 3312278 D PFAM: flagellar hook capping protein; KEGG: ajs:Ajs_3829 flagellar hook capping protein; flagellar hook capping protein 3311628..3312278 Acidovorax ebreus TPSY 7383325 YP_002554536.1 CDS Dtpsy_3103 NC_011992.1 3312307 3313902 D TIGRFAM: flagellar basal body FlaE domain protein; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; KEGG: ajs:Ajs_3830 hypothetical protein; flagellar basal body FlaE domain protein 3312307..3313902 Acidovorax ebreus TPSY 7383326 YP_002554537.1 CDS Dtpsy_3104 NC_011992.1 3313929 3314669 D TIGRFAM: flagellar basal-body rod protein FlgF; flagellar basal-body rod FlgF family protein; PFAM: flagellar basal body rod protein; KEGG: ajs:Ajs_3831 flagellar basal-body rod protein FlgF; flagellar basal-body rod protein FlgF 3313929..3314669 Acidovorax ebreus TPSY 7383327 YP_002554538.1 CDS Dtpsy_3105 NC_011992.1 3314688 3315470 D TIGRFAM: flagellar basal-body rod protein FlgG; flagellar basal-body rod FlgG family protein; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: ajs:Ajs_3832 flagellar basal-body rod protein FlgG; flagellar basal-body rod protein FlgG 3314688..3315470 Acidovorax ebreus TPSY 7383328 YP_002554539.1 CDS Dtpsy_3106 NC_011992.1 3315494 3316210 D PFAM: flagellar L-ring protein; KEGG: ajs:Ajs_3833 flagellar L-ring protein; flagellar L-ring protein 3315494..3316210 Acidovorax ebreus TPSY 7383329 YP_002554540.1 CDS Dtpsy_3107 NC_011992.1 3316211 3317191 D KEGG: ajs:Ajs_3834 hypothetical protein; hypothetical protein 3316211..3317191 Acidovorax ebreus TPSY 7383330 YP_002554541.1 CDS flgI NC_011992.1 3317369 3318493 D part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein 3317369..3318493 Acidovorax ebreus TPSY 7383331 YP_002554542.1 CDS Dtpsy_3109 NC_011992.1 3318576 3319520 D KEGG: ajs:Ajs_3836 flagellar rod assembly protein/muramidase FlgJ; TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; Flagellar protein FlgJ type-2 family protein; SMART: Lysozyme subfamily 2; flagellar rod assembly protein/muramidase FlgJ 3318576..3319520 Acidovorax ebreus TPSY 7383332 YP_002554543.1 CDS Dtpsy_3110 NC_011992.1 3319547 3321565 D TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: ajs:Ajs_3837 flagellar hook-associated protein FlgK; flagellar hook-associated protein FlgK 3319547..3321565 Acidovorax ebreus TPSY 7383333 YP_002554544.1 CDS Dtpsy_3111 NC_011992.1 3321577 3322839 D TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; KEGG: ajs:Ajs_3838 flagellar hook-associated protein 3; flagellar hook-associated protein 3 3321577..3322839 Acidovorax ebreus TPSY 7383334 YP_002554545.1 CDS Dtpsy_3112 NC_011992.1 3322928 3324169 D PFAM: Metal-dependent hydrolase HDOD; KEGG: ajs:Ajs_3839 putative signal transduction protein; putative signal transduction protein 3322928..3324169 Acidovorax ebreus TPSY 7383335 YP_002554546.1 CDS Dtpsy_3113 NC_011992.1 3324240 3325646 D PFAM: sodium:neurotransmitter symporter; KEGG: ajs:Ajs_3840 sodium:neurotransmitter symporter; sodium:neurotransmitter symporter 3324240..3325646 Acidovorax ebreus TPSY 7383336 YP_002554547.1 CDS Dtpsy_3114 NC_011992.1 3325827 3327305 D PFAM: 2-nitropropane dioxygenase NPD; KEGG: ajs:Ajs_3841 2-nitropropane dioxygenase, NPD; 2-nitropropane dioxygenase NPD 3325827..3327305 Acidovorax ebreus TPSY 7383337 YP_002554548.1 CDS Dtpsy_3115 NC_011992.1 3327355 3328812 R PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: ajs:Ajs_3842 GntR family transcriptional regulator; transcriptional regulator, GntR family with aminotransferase domain complement(3327355..3328812) Acidovorax ebreus TPSY 7383338 YP_002554549.1 CDS Dtpsy_3116 NC_011992.1 3328957 3329556 D KEGG: ajs:Ajs_3843 hypothetical protein; hypothetical protein 3328957..3329556 Acidovorax ebreus TPSY 7383339 YP_002554550.1 CDS Dtpsy_3117 NC_011992.1 3329625 3330569 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: ajs:Ajs_3844 hypothetical protein; protein of unknown function DUF6 transmembrane 3329625..3330569 Acidovorax ebreus TPSY 7385410 YP_002554551.1 CDS Dtpsy_3118 NC_011992.1 3330633 3331913 D PFAM: aminotransferase class I and II; KEGG: ajs:Ajs_3845 GntR family transcriptional regulator; putative transcriptional regulator, GntR family 3330633..3331913 Acidovorax ebreus TPSY 7383340 YP_002554552.1 CDS Dtpsy_3119 NC_011992.1 3332028 3332903 D TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: ajs:Ajs_3846 PhzF family phenazine biosynthesis protein; phenazine biosynthesis protein PhzF family 3332028..3332903 Acidovorax ebreus TPSY 7383341 YP_002554553.1 CDS Dtpsy_3120 NC_011992.1 3332900 3333877 D PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: ajs:Ajs_3847 hypothetical protein; hypothetical protein 3332900..3333877 Acidovorax ebreus TPSY 7383342 YP_002554554.1 CDS Dtpsy_3121 NC_011992.1 3334052 3335140 D KEGG: ajs:Ajs_3848 hypothetical protein; hypothetical protein 3334052..3335140 Acidovorax ebreus TPSY 7383343 YP_002554555.1 CDS Dtpsy_3122 NC_011992.1 3335174 3336433 D PFAM: Extracellular ligand-binding receptor; KEGG: ajs:Ajs_3849 putative UreA/short-chain amide ABC transporter; Extracellular ligand-binding receptor 3335174..3336433 Acidovorax ebreus TPSY 7383344 YP_002554556.1 CDS Dtpsy_3123 NC_011992.1 3336430 3337551 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: ajs:Ajs_3850 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3336430..3337551 Acidovorax ebreus TPSY 7383345 YP_002554557.1 CDS Dtpsy_3124 NC_011992.1 3337612 3338283 D PFAM: Phosphoglycerate mutase; KEGG: ajs:Ajs_3851 phosphoglycerate mutase; Phosphoglycerate mutase 3337612..3338283 Acidovorax ebreus TPSY 7383346 YP_002554558.1 CDS Dtpsy_3125 NC_011992.1 3338349 3339176 R PFAM: Creatininase; KEGG: ajs:Ajs_3852 creatininase; Creatininase complement(3338349..3339176) Acidovorax ebreus TPSY 7383347 YP_002554559.1 CDS Dtpsy_3126 NC_011992.1 3339227 3339979 D PFAM: Threonyl/alanyl tRNA synthetase SAD; KEGG: ajs:Ajs_3853 metal-dependent hydrolases related to alanyl-tRNA synthetase; Threonyl/alanyl tRNA synthetase SAD 3339227..3339979 Acidovorax ebreus TPSY 7383348 YP_002554560.1 CDS Dtpsy_3127 NC_011992.1 3340032 3342248 D PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: ajs:Ajs_3854 cytochrome c biogenesis protein, transmembrane region; cytochrome c biogenesis protein transmembrane region 3340032..3342248 Acidovorax ebreus TPSY 7383349 YP_002554561.1 CDS Dtpsy_3128 NC_011992.1 3342249 3343295 R PFAM: protein of unknown function DUF323; KEGG: ajs:Ajs_3855 hypothetical protein; protein of unknown function DUF323 complement(3342249..3343295) Acidovorax ebreus TPSY 7383350 YP_002554562.1 CDS Dtpsy_3129 NC_011992.1 3343459 3344727 D TIGRFAM: Na+/H+ antiporter NhaA; PFAM: Na+/H+ antiporter NhaA; KEGG: ajs:Ajs_3856 Na+/H+ antiporter NhaA; Na+/H+ antiporter NhaA 3343459..3344727 Acidovorax ebreus TPSY 7383351 YP_002554563.1 CDS Dtpsy_3130 NC_011992.1 3344777 3345292 D KEGG: ajs:Ajs_3857 CoA-binding domain-containing protein; CoA-binding domain-containing protein 3344777..3345292 Acidovorax ebreus TPSY 7383352 YP_002554564.1 CDS Dtpsy_3131 NC_011992.1 3345347 3346672 D KEGG: ajs:Ajs_3858 O-acetylhomoserine/O-acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; O-acetylhomoserine/O-acetylserine sulfhydrylase 3345347..3346672 Acidovorax ebreus TPSY 7383353 YP_002554565.1 CDS Dtpsy_3132 NC_011992.1 3346725 3347708 R PFAM: Integral membrane protein TerC; KEGG: ajs:Ajs_3859 integral membrane protein TerC; Integral membrane protein TerC complement(3346725..3347708) Acidovorax ebreus TPSY 7383354 YP_002554566.1 CDS Dtpsy_3133 NC_011992.1 3347836 3348762 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_3860 LysR family transcriptional regulator; transcriptional regulator, LysR family 3347836..3348762 Acidovorax ebreus TPSY 7383355 YP_002554567.1 CDS hemE NC_011992.1 3348864 3349976 D catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 3348864..3349976 Acidovorax ebreus TPSY 7383356 YP_002554568.1 CDS Dtpsy_3135 NC_011992.1 3350627 3352801 D KEGG: ajs:Ajs_3862 primosomal protein N'; TIGRFAM: primosomal protein N'; PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: helicase domain protein; DEAD-like helicases; primosomal protein N' 3350627..3352801 Acidovorax ebreus TPSY 7383357 YP_002554569.1 CDS Dtpsy_3136 NC_011992.1 3352917 3354038 D KEGG: ajs:Ajs_3863 L-asparaginases, type II; TIGRFAM: L-asparaginase, type II; PFAM: Asparaginase/glutaminase; L-asparaginase, type II 3352917..3354038 Acidovorax ebreus TPSY 7383358 YP_002554570.1 CDS Dtpsy_3137 NC_011992.1 3354251 3355207 R PFAM: Auxin Efflux Carrier; KEGG: ajs:Ajs_3864 auxin efflux carrier; Auxin Efflux Carrier complement(3354251..3355207) Acidovorax ebreus TPSY 7383359 YP_002554571.1 CDS Dtpsy_3138 NC_011992.1 3355385 3357454 D PFAM: UvrD/REP helicase; KEGG: ajs:Ajs_3865 UvrD/REP helicase; UvrD/REP helicase 3355385..3357454 Acidovorax ebreus TPSY 7383360 YP_002554572.1 CDS Dtpsy_3139 NC_011992.1 3357459 3357893 D KEGG: ajs:Ajs_3866 hypothetical protein; hypothetical protein 3357459..3357893 Acidovorax ebreus TPSY 7383361 YP_002554573.1 CDS Dtpsy_3140 NC_011992.1 3357935 3359116 D PFAM: phospholipase A1; KEGG: ajs:Ajs_3867 phospholipase A1; phospholipase A1 3357935..3359116 Acidovorax ebreus TPSY 7383362 YP_002554574.1 CDS Dtpsy_3141 NC_011992.1 3359358 3359744 D KEGG: ajs:Ajs_3868 hypothetical protein; hypothetical protein 3359358..3359744 Acidovorax ebreus TPSY 7383363 YP_002554575.1 CDS Dtpsy_3142 NC_011992.1 3359820 3360308 R PFAM: UspA domain protein; KEGG: ajs:Ajs_3869 UspA domain-containing protein; UspA domain protein complement(3359820..3360308) Acidovorax ebreus TPSY 7383364 YP_002554576.1 CDS tgt NC_011992.1 3360411 3361583 D Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 3360411..3361583 Acidovorax ebreus TPSY 7383365 YP_002554577.1 CDS Dtpsy_3144 NC_011992.1 3361663 3362412 D PFAM: protein of unknown function DUF72; KEGG: pna:Pnap_0190 protein of unknown function DUF72; protein of unknown function DUF72 3361663..3362412 Acidovorax ebreus TPSY 7383366 YP_002554578.1 CDS Dtpsy_3145 NC_011992.1 3362409 3363569 R KEGG: ajs:Ajs_3872 hypothetical protein; hypothetical protein complement(3362409..3363569) Acidovorax ebreus TPSY 7383367 YP_002554579.1 CDS Dtpsy_3146 NC_011992.1 3363648 3364448 R KEGG: ajs:Ajs_3873 hypothetical protein; hypothetical protein complement(3363648..3364448) Acidovorax ebreus TPSY 7383368 YP_002554580.1 CDS Dtpsy_3147 NC_011992.1 3364451 3364936 R KEGG: ajs:Ajs_3874 hypothetical protein; hypothetical protein complement(3364451..3364936) Acidovorax ebreus TPSY 7383369 YP_002554581.1 CDS Dtpsy_3148 NC_011992.1 3364933 3365415 R KEGG: ajs:Ajs_3875 hypothetical protein; hypothetical protein complement(3364933..3365415) Acidovorax ebreus TPSY 7383370 YP_002554582.1 CDS Dtpsy_3149 NC_011992.1 3365544 3366053 R PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: ajs:Ajs_3876 AsnC family transcriptional regulator; transcriptional regulator, AsnC family complement(3365544..3366053) Acidovorax ebreus TPSY 7383371 YP_002554583.1 CDS Dtpsy_3150 NC_011992.1 3366194 3367210 D catalyzes conversion of 1-aminocyclopropane-1-carboxylate to ammonia and alpha-ketobutyrate; 1-aminocyclopropane-1-carboxylate deaminase 3366194..3367210 Acidovorax ebreus TPSY 7383372 YP_002554584.1 CDS Dtpsy_3151 NC_011992.1 3367250 3369205 R PFAM: phospholipid/glycerol acyltransferase; major facilitator superfamily MFS_1; SMART: phospholipid/glycerol acyltransferase; KEGG: ajs:Ajs_3878 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase complement(3367250..3369205) Acidovorax ebreus TPSY 7383373 YP_002554585.1 CDS Dtpsy_3152 NC_011992.1 3369340 3370083 D SMART: helix-turn-helix domain protein; KEGG: ajs:Ajs_3879 XRE family transcriptional regulator; helix-turn-helix domain protein 3369340..3370083 Acidovorax ebreus TPSY 7383374 YP_002554586.1 CDS Dtpsy_3153 NC_011992.1 3370114 3370734 D KEGG: bpm:BURPS1710b_A1017 hypothetical protein; hypothetical protein 3370114..3370734 Acidovorax ebreus TPSY 7383375 YP_002554587.1 CDS Dtpsy_3154 NC_011992.1 3370731 3371003 R KEGG: ajs:Ajs_3881 hypothetical protein; hypothetical protein complement(3370731..3371003) Acidovorax ebreus TPSY 7383376 YP_002554588.1 CDS Dtpsy_3155 NC_011992.1 3371366 3371782 D KEGG: ajs:Ajs_3882 hypothetical protein; hypothetical protein 3371366..3371782 Acidovorax ebreus TPSY 7383377 YP_002554589.1 CDS Dtpsy_3156 NC_011992.1 3371949 3372935 D PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_3883 hypothetical protein; hypothetical protein 3371949..3372935 Acidovorax ebreus TPSY 7383378 YP_002554590.1 CDS Dtpsy_3157 NC_011992.1 3372968 3374446 D PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ajs:Ajs_3884 FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase 3372968..3374446 Acidovorax ebreus TPSY 7383379 YP_002554591.1 CDS Dtpsy_3158 NC_011992.1 3374443 3375552 D TIGRFAM: alkylhydroperoxidase like protein, AhpD family; uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase; KEGG: ajs:Ajs_3885 uncharacterized peroxidase-related enzyme; uncharacterized peroxidase-related enzyme 3374443..3375552 Acidovorax ebreus TPSY 7383380 YP_002554592.1 CDS Dtpsy_3159 NC_011992.1 3375929 3377239 D PFAM: FAD dependent oxidoreductase; KEGG: ajs:Ajs_3886 D-amino-acid dehydrogenase; D-amino-acid dehydrogenase 3375929..3377239 Acidovorax ebreus TPSY 7383381 YP_002554593.1 CDS Dtpsy_3160 NC_011992.1 3377311 3378576 R PFAM: domain of unknown function DUF1745; KEGG: ajs:Ajs_3887 hypothetical protein; domain of unknown function DUF1745 complement(3377311..3378576) Acidovorax ebreus TPSY 7383382 YP_002554594.1 CDS Dtpsy_3161 NC_011992.1 3378617 3379612 R KEGG: ajs:Ajs_3888 hypothetical protein; hypothetical protein complement(3378617..3379612) Acidovorax ebreus TPSY 7383383 YP_002554595.1 CDS Dtpsy_3162 NC_011992.1 3379833 3380252 D PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: ajs:Ajs_3889 histone family protein DNA-binding protein; histone family protein DNA-binding protein 3379833..3380252 Acidovorax ebreus TPSY 7383384 YP_002554596.1 CDS Dtpsy_3163 NC_011992.1 3380340 3381134 R KEGG: ajs:Ajs_3890 protein tyrosine/serine phosphatase; protein tyrosine/serine phosphatase complement(3380340..3381134) Acidovorax ebreus TPSY 7383385 YP_002554597.1 CDS Dtpsy_3164 NC_011992.1 3381510 3382796 D PFAM: integrase family protein; KEGG: lch:Lcho_2977 integrase family protein; integrase family protein 3381510..3382796 Acidovorax ebreus TPSY 7383386 YP_002554598.1 CDS Dtpsy_3165 NC_011992.1 3383302 3384528 R PFAM: transposase mutator type; KEGG: ajs:Ajs_2663 transposase, mutator type; transposase mutator type complement(3383302..3384528) Acidovorax ebreus TPSY 7383387 YP_002554599.1 CDS Dtpsy_3167 NC_011992.1 3385188 3385406 R PFAM: Prophage CP4-57 regulatory; KEGG: gbm:Gbem_3477 phage transcriptional regulator, AlpA; phage transcriptional regulator, AlpA complement(3385188..3385406) Acidovorax ebreus TPSY 7383389 YP_002554600.1 CDS Dtpsy_3168 NC_011992.1 3386087 3386872 D KEGG: neu:NE2545 hypothetical protein; hypothetical protein 3386087..3386872 Acidovorax ebreus TPSY 7383390 YP_002554601.1 CDS Dtpsy_3169 NC_011992.1 3386875 3387516 D KEGG: neu:NE2544 helix-hairpin-helix DNA-binding motif-containing protein; hypothetical protein 3386875..3387516 Acidovorax ebreus TPSY 7383391 YP_002554602.1 CDS Dtpsy_3170 NC_011992.1 3387522 3388373 D KEGG: neu:NE2543 hypothetical protein; hypothetical protein 3387522..3388373 Acidovorax ebreus TPSY 7383392 YP_002554603.1 CDS Dtpsy_3171 NC_011992.1 3388524 3388994 D KEGG: mms:mma_3461 hypothetical protein; hypothetical protein 3388524..3388994 Acidovorax ebreus TPSY 7383393 YP_002554604.1 CDS Dtpsy_3172 NC_011992.1 3389131 3390696 D PFAM: Resolvase domain; Recombinase; KEGG: bte:BTH_I0075 recombinase; Recombinase 3389131..3390696 Acidovorax ebreus TPSY 7383394 YP_002554605.1 CDS Dtpsy_3173 NC_011992.1 3390693 3391604 D KEGG: mms:mma_3459 chromosome partitionning protein ParB; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; RepB plasmid partition; SMART: ParB domain protein nuclease; parB-like partition protein 3390693..3391604 Acidovorax ebreus TPSY 7383395 YP_002554606.1 CDS Dtpsy_3174 NC_011992.1 3391601 3392479 D PFAM: ParB domain protein nuclease; RepB plasmid partition; SMART: ParB domain protein nuclease; KEGG: mms:mma_3458 hypothetical protein; RepB plasmid partition 3391601..3392479 Acidovorax ebreus TPSY 7383396 YP_002554607.1 CDS Dtpsy_3175 NC_011992.1 3392476 3393858 D KEGG: mms:mma_3457 hypothetical protein; hypothetical protein 3392476..3393858 Acidovorax ebreus TPSY 7383397 YP_002554608.1 CDS Dtpsy_3177 NC_011992.1 3394293 3395210 D KEGG: neu:NE2519 hypothetical protein; hypothetical protein 3394293..3395210 Acidovorax ebreus TPSY 7383399 YP_002554609.1 CDS Dtpsy_3178 NC_011992.1 3395276 3396025 D KEGG: spl:Spea_2313 type III restriction protein res subunit; type III restriction protein res subunit 3395276..3396025 Acidovorax ebreus TPSY 7383400 YP_002554610.1 CDS Dtpsy_3179 NC_011992.1 3396012 3396887 R PFAM: Integrase catalytic region; KEGG: ajs:Ajs_1844 integrase catalytic subunit; Integrase catalytic region complement(3396012..3396887) Acidovorax ebreus TPSY 7383401 YP_002554611.1 CDS Dtpsy_3180 NC_011992.1 3396884 3397162 R PFAM: transposase IS3/IS911 family protein; KEGG: ajs:Ajs_1845 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein complement(3396884..3397162) Acidovorax ebreus TPSY 7383402 YP_002554612.1 CDS Dtpsy_3181 NC_011992.1 3397200 3398387 D KEGG: spl:Spea_2311 hypothetical protein; hypothetical protein 3397200..3398387 Acidovorax ebreus TPSY 7383403 YP_002554613.1 CDS Dtpsy_3182 NC_011992.1 3398712 3401393 D PFAM: sigma-70 region 4 domain protein; KEGG: spl:Spea_2309 sigma-70 region 4 domain-containing protein; sigma-70 region 4 domain protein 3398712..3401393 Acidovorax ebreus TPSY 7383404 YP_002554614.1 CDS Dtpsy_3183 NC_011992.1 3401424 3403244 D PFAM: ATPase associated with various cellular activities AAA_5; KEGG: csc:Csac_0603 ATPase; ATPase associated with various cellular activities AAA_5 3401424..3403244 Acidovorax ebreus TPSY 7383405 YP_002554615.1 CDS Dtpsy_3184 NC_011992.1 3403349 3404503 D hypothetical protein 3403349..3404503 Acidovorax ebreus TPSY 7383406 YP_002554616.1 CDS Dtpsy_3185 NC_011992.1 3404510 3405694 R PFAM: DNA methylase N-4/N-6 domain protein; KEGG: ava:Ava_3014 DNA methylase N-4/N-6; DNA methylase N-4/N-6 domain protein complement(3404510..3405694) Acidovorax ebreus TPSY 7383407 YP_002554617.1 CDS Dtpsy_3186 NC_011992.1 3405914 3406894 D KEGG: mxa:MXAN_0297 hypothetical protein; restriction endonuclease-like protein 3405914..3406894 Acidovorax ebreus TPSY 7383408 YP_002554618.1 CDS Dtpsy_3187 NC_011992.1 3406956 3407426 R PFAM: glycoside hydrolase family 24; KEGG: bmu:Bmul_2309 glycoside hydrolase family protein; glycoside hydrolase family 24 complement(3406956..3407426) Acidovorax ebreus TPSY 7383409 YP_002554619.1 CDS Dtpsy_3188 NC_011992.1 3407423 3407899 R KEGG: mms:mma_2787 hypothetical protein; hypothetical protein complement(3407423..3407899) Acidovorax ebreus TPSY 7383410 YP_002554620.1 CDS Dtpsy_3189 NC_011992.1 3407896 3408204 R KEGG: mms:mma_2786 hypothetical protein; hypothetical protein complement(3407896..3408204) Acidovorax ebreus TPSY 7383411 YP_002554621.1 CDS Dtpsy_3190 NC_011992.1 3408284 3408505 R KEGG: mca:MCA2677 hypothetical protein; hypothetical protein complement(3408284..3408505) Acidovorax ebreus TPSY 7383412 YP_002554622.1 CDS Dtpsy_3191 NC_011992.1 3408498 3410453 R KEGG: mca:MCA2676 hypothetical protein; hypothetical protein complement(3408498..3410453) Acidovorax ebreus TPSY 7383413 YP_002554623.1 CDS Dtpsy_3192 NC_011992.1 3410471 3410866 R KEGG: mca:MCA2675 hypothetical protein; hypothetical protein complement(3410471..3410866) Acidovorax ebreus TPSY 7383414 YP_002554624.1 CDS Dtpsy_3193 NC_011992.1 3410863 3411858 R KEGG: mca:MCA2674 hypothetical protein; hypothetical protein complement(3410863..3411858) Acidovorax ebreus TPSY 7383415 YP_002554625.1 CDS Dtpsy_3194 NC_011992.1 3411862 3413130 R KEGG: mca:MCA2673 hypothetical protein; hypothetical protein complement(3411862..3413130) Acidovorax ebreus TPSY 7383416 YP_002554626.1 CDS Dtpsy_3195 NC_011992.1 3413149 3416757 R KEGG: mca:MCA2672 hypothetical protein; hypothetical protein complement(3413149..3416757) Acidovorax ebreus TPSY 7383417 YP_002554627.1 CDS Dtpsy_3196 NC_011992.1 3416757 3417167 R KEGG: mca:MCA2671 hypothetical protein; hypothetical protein complement(3416757..3417167) Acidovorax ebreus TPSY 7383418 YP_002554628.1 CDS Dtpsy_3197 NC_011992.1 3417204 3421160 R TIGRFAM: phage tape measure protein; KEGG: mca:MCA2670 prophage LambdaMc01, tail tape measure protein, putative; phage tape measure protein complement(3417204..3421160) Acidovorax ebreus TPSY 7383419 YP_002554629.1 CDS Dtpsy_3198 NC_011992.1 3421162 3421806 R KEGG: mca:MCA2669 hypothetical protein; hypothetical protein complement(3421162..3421806) Acidovorax ebreus TPSY 7383420 YP_002554630.1 CDS Dtpsy_3199 NC_011992.1 3421987 3422385 R KEGG: mca:MCA2668 hypothetical protein; hypothetical protein complement(3421987..3422385) Acidovorax ebreus TPSY 7383666 YP_002554631.1 CDS Dtpsy_3200 NC_011992.1 3422397 3423149 R KEGG: mca:MCA2667 hypothetical protein; hypothetical protein complement(3422397..3423149) Acidovorax ebreus TPSY 7383748 YP_002554632.1 CDS Dtpsy_3201 NC_011992.1 3423146 3423364 R KEGG: mca:MCA2666 hypothetical protein; hypothetical protein complement(3423146..3423364) Acidovorax ebreus TPSY 7383749 YP_002554633.1 CDS Dtpsy_3202 NC_011992.1 3423370 3423816 R KEGG: rso:RSc0862 signal peptide protein; signal peptide protein complement(3423370..3423816) Acidovorax ebreus TPSY 7383750 YP_002554634.1 CDS Dtpsy_3203 NC_011992.1 3423820 3424122 R KEGG: mca:MCA2664 hypothetical protein; hypothetical protein complement(3423820..3424122) Acidovorax ebreus TPSY 7383751 YP_002554635.1 CDS Dtpsy_3204 NC_011992.1 3424122 3425126 R KEGG: hch:HCH_05665 hypothetical protein; hypothetical protein complement(3424122..3425126) Acidovorax ebreus TPSY 7383752 YP_002554636.1 CDS Dtpsy_3205 NC_011992.1 3425129 3425506 R KEGG: mca:MCA2662 hypothetical protein; hypothetical protein complement(3425129..3425506) Acidovorax ebreus TPSY 7383753 YP_002554637.1 CDS Dtpsy_3206 NC_011992.1 3425508 3426833 R PFAM: peptidase S49; KEGG: mca:MCA2661 prophage LambdaMc01, U7 family peptidase; peptidase S49 complement(3425508..3426833) Acidovorax ebreus TPSY 7383754 YP_002554638.1 CDS Dtpsy_3207 NC_011992.1 3426879 3428378 R TIGRFAM: phage portal protein, lambda family; PFAM: portal protein lambda; KEGG: mca:MCA2660 prophage LambdaMc01, lambda family portal protein; phage portal protein, lambda family complement(3426879..3428378) Acidovorax ebreus TPSY 7383755 YP_002554639.1 CDS Dtpsy_3208 NC_011992.1 3428378 3428584 R KEGG: mca:MCA2659 hypothetical protein; hypothetical protein complement(3428378..3428584) Acidovorax ebreus TPSY 7383756 YP_002554640.1 CDS Dtpsy_3209 NC_011992.1 3428614 3430569 R PFAM: terminase GpA; KEGG: mms:mma_2764 phage terminase, large subunit; terminase GpA complement(3428614..3430569) Acidovorax ebreus TPSY 7383757 YP_002554641.1 CDS Dtpsy_3210 NC_011992.1 3430572 3431138 R KEGG: sml:Smlt1874 hypothetical protein; hypothetical protein complement(3430572..3431138) Acidovorax ebreus TPSY 7383758 YP_002554642.1 CDS Dtpsy_3211 NC_011992.1 3431249 3431455 D KEGG: sml:Smlt1875 hypothetical protein; hypothetical protein 3431249..3431455 Acidovorax ebreus TPSY 7383759 YP_002554643.1 CDS Dtpsy_3212 NC_011992.1 3431551 3432132 D KEGG: mms:mma_2762 hypothetical protein; hypothetical protein 3431551..3432132 Acidovorax ebreus TPSY 7383760 YP_002554644.1 CDS Dtpsy_3215 NC_011992.1 3433111 3433353 D KEGG: aci:ACIAD2009 hypothetical protein; hypothetical protein 3433111..3433353 Acidovorax ebreus TPSY 7383763 YP_002554645.1 CDS Dtpsy_3216 NC_011992.1 3433317 3434594 R PFAM: DNA methylase N-4/N-6 domain protein; ParB domain protein nuclease; SMART: ParB domain protein nuclease; KEGG: mms:mma_2757 DNA modification methylase; DNA methylase N-4/N-6 domain protein complement(3433317..3434594) Acidovorax ebreus TPSY 7383764 YP_002554646.1 CDS Dtpsy_3217 NC_011992.1 3434591 3436006 R PFAM: DNA methylase N-4/N-6 domain protein; ParB domain protein nuclease; SMART: ParB domain protein nuclease; KEGG: mms:mma_2756 phage related DNA methyltransferase; DNA methylase N-4/N-6 domain protein complement(3434591..3436006) Acidovorax ebreus TPSY 7383765 YP_002554647.1 CDS Dtpsy_3218 NC_011992.1 3436365 3436760 R KEGG: mca:MCA2651 hypothetical protein; hypothetical protein complement(3436365..3436760) Acidovorax ebreus TPSY 7383766 YP_002554648.1 CDS Dtpsy_3219 NC_011992.1 3436753 3436962 R KEGG: mca:MCA2650 hypothetical protein; hypothetical protein complement(3436753..3436962) Acidovorax ebreus TPSY 7383767 YP_002554649.1 CDS Dtpsy_3220 NC_011992.1 3436964 3437440 R KEGG: sml:Smlt1885 hypothetical protein; hypothetical protein complement(3436964..3437440) Acidovorax ebreus TPSY 7383768 YP_002554650.1 CDS Dtpsy_3221 NC_011992.1 3437570 3439852 R TIGRFAM: phage/plasmid primase, P4 family; PFAM: primase P4; KEGG: sml:Smlt1886 putative phage-related protein; hypothetical protein complement(3437570..3439852) Acidovorax ebreus TPSY 7383769 YP_002554651.1 CDS Dtpsy_3222 NC_011992.1 3439845 3440072 R KEGG: mca:MCA2647 hypothetical protein; hypothetical protein complement(3439845..3440072) Acidovorax ebreus TPSY 7383770 YP_002554652.1 CDS Dtpsy_3223 NC_011992.1 3440069 3440806 R KEGG: sml:Smlt1888 hypothetical protein; hypothetical protein complement(3440069..3440806) Acidovorax ebreus TPSY 7383771 YP_002554653.1 CDS Dtpsy_3224 NC_011992.1 3440803 3441303 R KEGG: mms:mma_2693 hypothetical protein; hypothetical protein complement(3440803..3441303) Acidovorax ebreus TPSY 7383772 YP_002554654.1 CDS Dtpsy_3225 NC_011992.1 3441311 3441934 R KEGG: sml:Smlt1890 hypothetical protein; hypothetical protein complement(3441311..3441934) Acidovorax ebreus TPSY 7383773 YP_002554655.1 CDS Dtpsy_3226 NC_011992.1 3441940 3442785 R KEGG: sml:Smlt1891 hypothetical protein; hypothetical protein complement(3441940..3442785) Acidovorax ebreus TPSY 7383774 YP_002554656.1 CDS Dtpsy_3227 NC_011992.1 3442785 3443543 R PFAM: BRO domain protein; KEGG: sml:Smlt1892 putative phage-related protein; prophage antirepressor complement(3442785..3443543) Acidovorax ebreus TPSY 7383775 YP_002554657.1 CDS Dtpsy_3228 NC_011992.1 3443546 3443827 R KEGG: mms:mma_2747 hypothetical protein; hypothetical protein complement(3443546..3443827) Acidovorax ebreus TPSY 7383776 YP_002554658.1 CDS Dtpsy_3229 NC_011992.1 3443833 3444309 R KEGG: sml:Smlt1893 hypothetical protein; hypothetical protein complement(3443833..3444309) Acidovorax ebreus TPSY 7383777 YP_002554659.1 CDS Dtpsy_3230 NC_011992.1 3444321 3444584 R KEGG: bvi:Bcep1808_3270 hypothetical protein; hypothetical protein complement(3444321..3444584) Acidovorax ebreus TPSY 7383778 YP_002554660.1 CDS Dtpsy_3231 NC_011992.1 3444766 3445230 R KEGG: bvi:Bcep1808_3271 hypothetical protein; hypothetical protein complement(3444766..3445230) Acidovorax ebreus TPSY 7383779 YP_002554661.1 CDS Dtpsy_3232 NC_011992.1 3445227 3446651 R PFAM: Resolvase domain; Recombinase; KEGG: bvi:Bcep1808_3272 resolvase domain-containing protein; Resolvase domain protein complement(3445227..3446651) Acidovorax ebreus TPSY 7383780 YP_002554662.1 CDS Dtpsy_3233 NC_011992.1 3446648 3447118 R KEGG: bvi:Bcep1808_3273 hypothetical protein; hypothetical protein complement(3446648..3447118) Acidovorax ebreus TPSY 7383781 YP_002554663.1 CDS Dtpsy_3234 NC_011992.1 3447440 3449152 R PFAM: protein of unknown function DUF262; KEGG: psa:PST_3442 hypothetical protein; protein of unknown function DUF262 complement(3447440..3449152) Acidovorax ebreus TPSY 7383782 YP_002554664.1 CDS Dtpsy_3235 NC_011992.1 3449176 3449988 R PFAM: protein of unknown function DUF955; KEGG: bvi:Bcep1808_3274 hypothetical protein; protein of unknown function DUF955 complement(3449176..3449988) Acidovorax ebreus TPSY 7383783 YP_002554665.1 CDS Dtpsy_3236 NC_011992.1 3450109 3450450 R PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: rpd:RPD_2295 transcriptional regulator; transcriptional regulator, XRE family complement(3450109..3450450) Acidovorax ebreus TPSY 7383784 YP_002554666.1 CDS Dtpsy_3237 NC_011992.1 3450696 3451931 D KEGG: nwi:Nwi_1958 hypothetical protein; hypothetical protein 3450696..3451931 Acidovorax ebreus TPSY 7383785 YP_002554667.1 CDS Dtpsy_3238 NC_011992.1 3451935 3452933 D KEGG: vei:Veis_4717 hypothetical protein; hypothetical protein 3451935..3452933 Acidovorax ebreus TPSY 7383786 YP_002554668.1 CDS Dtpsy_3239 NC_011992.1 3453007 3453237 D KEGG: maq:Maqu_1259 hypothetical protein; hypothetical protein 3453007..3453237 Acidovorax ebreus TPSY 7383787 YP_002554669.1 CDS Dtpsy_3240 NC_011992.1 3453671 3454369 R PFAM: response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; KEGG: ajs:Ajs_3891 two component fis family transcriptional regulator; two component transcriptional regulator, Fis family complement(3453671..3454369) Acidovorax ebreus TPSY 7383789 YP_002554670.1 CDS Dtpsy_3241 NC_011992.1 3454406 3456694 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: PAS domain containing protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ajs:Ajs_3892 multi-sensor signal transduction histidine kinase; PAS/PAC sensor signal transduction histidine kinase complement(3454406..3456694) Acidovorax ebreus TPSY 7383790 YP_002554671.1 CDS Dtpsy_3242 NC_011992.1 3456691 3457284 R KEGG: ajs:Ajs_3893 hypothetical protein; hypothetical protein complement(3456691..3457284) Acidovorax ebreus TPSY 7383791 YP_002554672.1 CDS Dtpsy_3243 NC_011992.1 3457313 3458686 R TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; KEGG: ajs:Ajs_3894 sun protein; sun protein complement(3457313..3458686) Acidovorax ebreus TPSY 7383792 YP_002554673.1 CDS Dtpsy_3244 NC_011992.1 3458683 3459261 R KEGG: ajs:Ajs_3895 hypothetical protein; hypothetical protein complement(3458683..3459261) Acidovorax ebreus TPSY 7383793 YP_002554674.1 CDS Dtpsy_3245 NC_011992.1 3459402 3463631 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' complement(3459402..3463631) Acidovorax ebreus TPSY 7383794 YP_002554675.1 CDS rpoB NC_011992.1 3463762 3467886 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta complement(3463762..3467886) Acidovorax ebreus TPSY 7383795 YP_002554676.1 CDS rplL NC_011992.1 3468160 3468540 R present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 complement(3468160..3468540) Acidovorax ebreus TPSY 7383796 YP_002554677.1 CDS rplJ NC_011992.1 3468590 3469096 R binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 complement(3468590..3469096) Acidovorax ebreus TPSY 7383797 YP_002554678.1 CDS rplA NC_011992.1 3469338 3470033 R in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 complement(3469338..3470033) Acidovorax ebreus TPSY 7383798 YP_002554679.1 CDS rplK NC_011992.1 3470034 3470465 R binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 complement(3470034..3470465) Acidovorax ebreus TPSY 7383799 YP_002554680.1 CDS Dtpsy_3251 NC_011992.1 3470575 3471165 R KEGG: ajs:Ajs_3902 transcription antitermination protein NusG; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: KOW domain protein; NGN domain protein; SMART: KOW domain protein; NGN domain protein; NusG antitermination factor complement(3470575..3471165) Acidovorax ebreus TPSY 7383800 YP_002554681.1 CDS secE NC_011992.1 3471165 3471548 R forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE complement(3471165..3471548) Acidovorax ebreus TPSY 7383801 YP_002554682.1 CDS Dtpsy_3253 NC_011992.1 3471725 3472915 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(3471725..3472915) Acidovorax ebreus TPSY 7383803 YP_002554683.1 CDS Dtpsy_3254 NC_011992.1 3473496 3473819 D PFAM: transposase IS3/IS911 family protein; KEGG: ajs:Ajs_3905 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 3473496..3473819 Acidovorax ebreus TPSY 7383807 YP_002554684.1 CDS Dtpsy_3255 NC_011992.1 3473876 3474727 D PFAM: Integrase catalytic region; KEGG: pol:Bpro_5204 integrase, catalytic region; Integrase catalytic region 3473876..3474727 Acidovorax ebreus TPSY 7383808 YP_002554685.1 CDS Dtpsy_3256 NC_011992.1 3480661 3481611 R catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase complement(3480661..3481611) Acidovorax ebreus TPSY 7383815 YP_002554686.1 CDS Dtpsy_3257 NC_011992.1 3481647 3482858 R TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; KEGG: ajs:Ajs_3908 benzoate transporter; benzoate transporter complement(3481647..3482858) Acidovorax ebreus TPSY 7383816 YP_002554687.1 CDS Dtpsy_3258 NC_011992.1 3482960 3484828 R PFAM: K potassium transporter; KEGG: ajs:Ajs_3909 K+ potassium transporter; K potassium transporter complement(3482960..3484828) Acidovorax ebreus TPSY 7383817 YP_002554688.1 CDS Dtpsy_3259 NC_011992.1 3484969 3486264 R TIGRFAM: glutamate/cysteine ligase; PFAM: glutamate--cysteine ligase GshA; KEGG: ajs:Ajs_3910 glutamate--cysteine ligase; glutamate/cysteine ligase complement(3484969..3486264) Acidovorax ebreus TPSY 7383818 YP_002554689.1 CDS Dtpsy_3260 NC_011992.1 3486329 3487795 R PFAM: cation transporter; KEGG: ajs:Ajs_3911 cation transporter; cation transporter complement(3486329..3487795) Acidovorax ebreus TPSY 7383819 YP_002554690.1 CDS trkA NC_011992.1 3487811 3489265 R involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; potassium transporter peripheral membrane component complement(3487811..3489265) Acidovorax ebreus TPSY 7383820 YP_002554691.1 CDS proA NC_011992.1 3489330 3490610 R Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase complement(3489330..3490610) Acidovorax ebreus TPSY 7383821 YP_002554692.1 CDS Dtpsy_3263 NC_011992.1 3490701 3490994 D KEGG: ajs:Ajs_3914 hypothetical protein; hypothetical protein 3490701..3490994 Acidovorax ebreus TPSY 7385573 YP_002554693.1 CDS holA NC_011992.1 3491052 3492098 R required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta complement(3491052..3492098) Acidovorax ebreus TPSY 7385163 YP_002554694.1 CDS Dtpsy_3265 NC_011992.1 3492172 3492681 R PFAM: Rare lipoprotein B; KEGG: ajs:Ajs_3916 rare lipoprotein B; Rare lipoprotein B complement(3492172..3492681) Acidovorax ebreus TPSY 7385164 YP_002554695.1 CDS leuS NC_011992.1 3492695 3495427 R leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase complement(3492695..3495427) Acidovorax ebreus TPSY 7385165 YP_002554696.1 CDS Dtpsy_3267 NC_011992.1 3495472 3496851 D PFAM: MscS Mechanosensitive ion channel; KEGG: ajs:Ajs_3919 MscS mechanosensitive ion channel; MscS Mechanosensitive ion channel 3495472..3496851 Acidovorax ebreus TPSY 7385166 YP_002554697.1 CDS Dtpsy_3268 NC_011992.1 3496936 3497376 R PFAM: Biopolymer transport protein ExbD/TolR; KEGG: ajs:Ajs_3920 biopolymer transport protein ExbD/TolR; Biopolymer transport protein ExbD/TolR complement(3496936..3497376) Acidovorax ebreus TPSY 7385167 YP_002554698.1 CDS Dtpsy_3269 NC_011992.1 3497382 3498050 R PFAM: MotA/TolQ/ExbB proton channel; KEGG: ajs:Ajs_3921 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel complement(3497382..3498050) Acidovorax ebreus TPSY 7385168 YP_002554699.1 CDS Dtpsy_3270 NC_011992.1 3498058 3498879 R KEGG: ajs:Ajs_3922 dihydrodipicolinate reductase; TIGRFAM: dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase; dihydrodipicolinate reductase complement(3498058..3498879) Acidovorax ebreus TPSY 7385169 YP_002554700.1 CDS Dtpsy_3271 NC_011992.1 3498956 3499507 R PFAM: SmpA/OmlA domain protein; KEGG: ajs:Ajs_3923 SmpA/OmlA domain-containing protein; SmpA/OmlA domain protein complement(3498956..3499507) Acidovorax ebreus TPSY 7385170 YP_002554701.1 CDS Dtpsy_3272 NC_011992.1 3499609 3500025 D PFAM: ferric-uptake regulator; KEGG: ajs:Ajs_3924 ferric uptake regulator family protein; ferric uptake regulator, Fur family 3499609..3500025 Acidovorax ebreus TPSY 7385171 YP_002554702.1 CDS Dtpsy_3273 NC_011992.1 3500039 3500995 R catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system; HPr kinase/phosphorylase complement(3500039..3500995) Acidovorax ebreus TPSY 7385172 YP_002554703.1 CDS Dtpsy_3274 NC_011992.1 3501017 3501484 R PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: ajs:Ajs_3926 PTS IIA-like nitrogen-regulatory protein PtsN; putative PTS IIA-like nitrogen-regulatory protein PtsN complement(3501017..3501484) Acidovorax ebreus TPSY 7385173 YP_002554704.1 CDS Dtpsy_3275 NC_011992.1 3501618 3501971 R TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: ajs:Ajs_3927 SSU ribosomal protein S30P / sigma 54 modulation protein; sigma 54 modulation protein/ribosomal protein S30EA complement(3501618..3501971) Acidovorax ebreus TPSY 7385174 YP_002554705.1 CDS Dtpsy_3276 NC_011992.1 3502348 3503268 D catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 3502348..3503268 Acidovorax ebreus TPSY 7385175 YP_002554706.1 CDS Dtpsy_3277 NC_011992.1 3503322 3505430 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ajs:Ajs_3929 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor complement(3503322..3505430) Acidovorax ebreus TPSY 7385176 YP_002554707.1 CDS Dtpsy_3278 NC_011992.1 3505644 3506486 R PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: ajs:Ajs_3930 protein of unknown function DUF306, MetA and HslJ; protein of unknown function DUF306 Meta and HslJ complement(3505644..3506486) Acidovorax ebreus TPSY 7385177 YP_002554708.1 CDS Dtpsy_3279 NC_011992.1 3506510 3507418 R TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: ajs:Ajs_3931 thioredoxin; thioredoxin complement(3506510..3507418) Acidovorax ebreus TPSY 7385178 YP_002554709.1 CDS Dtpsy_3280 NC_011992.1 3507603 3508184 D TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: ajs:Ajs_3932 PfpI family intracellular peptidase; intracellular protease, PfpI family 3507603..3508184 Acidovorax ebreus TPSY 7385179 YP_002554710.1 CDS Dtpsy_3281 NC_011992.1 3508320 3508661 D KEGG: ajs:Ajs_3933 hypothetical protein; hypothetical protein 3508320..3508661 Acidovorax ebreus TPSY 7385180 YP_002554711.1 CDS Dtpsy_3282 NC_011992.1 3508733 3509230 D KEGG: ajs:Ajs_3934 phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase, catalytic subunit 3508733..3509230 Acidovorax ebreus TPSY 7385181 YP_002554712.1 CDS Dtpsy_3283 NC_011992.1 3509227 3510402 D With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit 3509227..3510402 Acidovorax ebreus TPSY 7385182 YP_002554713.1 CDS Dtpsy_3284 NC_011992.1 3510414 3511412 D TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5 domain protein; SUA5/yciO/yrdC domain; KEGG: ajs:Ajs_3936 translation factor SUA5; Sua5/YciO/YrdC/YwlC family protein 3510414..3511412 Acidovorax ebreus TPSY 7385183 YP_002554714.1 CDS Dtpsy_3285 NC_011992.1 3511485 3512438 D KEGG: ajs:Ajs_3937 lipase; lipase 3511485..3512438 Acidovorax ebreus TPSY 7385184 YP_002554715.1 CDS Dtpsy_3286 NC_011992.1 3512659 3513333 R PFAM: OmpW family protein; KEGG: dac:Daci_0979 OmpW family protein; OmpW family protein complement(3512659..3513333) Acidovorax ebreus TPSY 7385185 YP_002554716.1 CDS Dtpsy_3287 NC_011992.1 3513368 3514507 R PFAM: lipolytic protein G-D-S-L family; KEGG: aav:Aave_4567 phospholipase/lecithinase/hemolysin-like protein; lipolytic protein G-D-S-L family complement(3513368..3514507) Acidovorax ebreus TPSY 7385186 YP_002554717.1 CDS Dtpsy_3288 NC_011992.1 3514693 3516192 R KEGG: ajs:Ajs_3939 D-alanyl-D-alanine carboxypeptidase PBP3; TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase complement(3514693..3516192) Acidovorax ebreus TPSY 7385187 YP_002554718.1 CDS Dtpsy_3289 NC_011992.1 3516225 3516935 D PFAM: peptidase M22 glycoprotease; KEGG: ajs:Ajs_3940 peptidase M22, glycoprotease; peptidase M22 glycoprotease 3516225..3516935 Acidovorax ebreus TPSY 7385188 YP_002554719.1 CDS Dtpsy_3290 NC_011992.1 3516932 3517408 D TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: ajs:Ajs_3941 SSU ribosomal protein S18P alanine acetyltransferase; ribosomal-protein-alanine acetyltransferase 3516932..3517408 Acidovorax ebreus TPSY 7385189 YP_002554720.1 CDS Dtpsy_3291 NC_011992.1 3517405 3518178 D KEGG: ajs:Ajs_3942 phage SPO1 DNA polymerase-related protein; phage SPO1 DNA polymerase-related protein 3517405..3518178 Acidovorax ebreus TPSY 7385190 YP_002554721.1 CDS Dtpsy_3292 NC_011992.1 3518373 3518867 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ajs:Ajs_3943 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein 3518373..3518867 Acidovorax ebreus TPSY 7385191 YP_002554722.1 CDS Dtpsy_3293 NC_011992.1 3518908 3520755 D KEGG: ajs:Ajs_3944 aldehyde ferredoxin oxidoreductase; PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; SMART: Aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase 3518908..3520755 Acidovorax ebreus TPSY 7385192 YP_002554723.1 CDS Dtpsy_3294 NC_011992.1 3520879 3522171 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ajs:Ajs_3945 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase 3520879..3522171 Acidovorax ebreus TPSY 7385193 YP_002554724.1 CDS Dtpsy_3295 NC_011992.1 3522261 3522515 D PFAM: thiamineS protein; KEGG: ajs:Ajs_3946 thiamineS protein; thiamineS protein 3522261..3522515 Acidovorax ebreus TPSY 7385194 YP_002554725.1 CDS Dtpsy_3296 NC_011992.1 3522545 3522844 D KEGG: ajs:Ajs_3947 hypothetical protein; hypothetical protein 3522545..3522844 Acidovorax ebreus TPSY 7385195 YP_002554726.1 CDS Dtpsy_3297 NC_011992.1 3523076 3524062 D TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: ajs:Ajs_3948 magnesium and cobalt transport protein CorA; magnesium and cobalt transport protein CorA 3523076..3524062 Acidovorax ebreus TPSY 7385196 YP_002554727.1 CDS Dtpsy_3298 NC_011992.1 3524276 3525031 R enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase complement(3524276..3525031) Acidovorax ebreus TPSY 7385197 YP_002554728.1 CDS Dtpsy_3299 NC_011992.1 3525136 3526815 R PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_3950 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(3525136..3526815) Acidovorax ebreus TPSY 7385198 YP_002554729.1 CDS Dtpsy_3300 NC_011992.1 3526945 3528369 R PFAM: NAD(P) transhydrogenase beta subunit; KEGG: ajs:Ajs_3951 NAD(P) transhydrogenase, beta subunit; NAD(P)(+) transhydrogenase (AB-specific) complement(3526945..3528369) Acidovorax ebreus TPSY 7385199 YP_002554730.1 CDS Dtpsy_3301 NC_011992.1 3528381 3528710 R KEGG: ajs:Ajs_3952 NAD(P) transhydrogenase, subunit alpha part 2; NAD(P) transhydrogenase, subunit alpha part 2 complement(3528381..3528710) Acidovorax ebreus TPSY 7385200 YP_002554731.1 CDS Dtpsy_3302 NC_011992.1 3528759 3529469 R KEGG: ajs:Ajs_3953 hypothetical protein; hypothetical protein complement(3528759..3529469) Acidovorax ebreus TPSY 7385201 YP_002554732.1 CDS Dtpsy_3303 NC_011992.1 3529503 3530618 R PFAM: alanine dehydrogenase/PNT domain protein; KEGG: ajs:Ajs_3954 NAD(P)(+) transhydrogenase (AB-specific); NAD(P)(+) transhydrogenase (AB-specific) complement(3529503..3530618) Acidovorax ebreus TPSY 7385202 YP_002554733.1 CDS Dtpsy_3304 NC_011992.1 3530830 3531894 R KEGG: ajs:Ajs_3955 fructose-bisphosphate aldolase; TIGRFAM: ketose-bisphosphate aldolase; fructose-bisphosphate aldolase, class II, Calvin cycle subtype; PFAM: ketose-bisphosphate aldolase class-II; fructose-bisphosphate aldolase, class II, Calvin cycle subtype complement(3530830..3531894) Acidovorax ebreus TPSY 7385203 YP_002554734.1 CDS Dtpsy_3305 NC_011992.1 3532048 3533484 R catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase complement(3532048..3533484) Acidovorax ebreus TPSY 7385204 YP_002554735.1 CDS Dtpsy_3306 NC_011992.1 3533568 3534959 R PFAM: peptidase M24; peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein; KEGG: ajs:Ajs_3957 aminopeptidase P; peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein complement(3533568..3534959) Acidovorax ebreus TPSY 7385205 YP_002554736.1 CDS Dtpsy_3307 NC_011992.1 3535026 3535865 D KEGG: fgenesh1_pg.C_scaffold_2000717.; hypothetical protein 3535026..3535865 Acidovorax ebreus TPSY 7385206 YP_002554737.1 CDS Dtpsy_3308 NC_011992.1 3535889 3536704 R KEGG: ajs:Ajs_3958 nucleotidyl transferase; nucleotidyl transferase complement(3535889..3536704) Acidovorax ebreus TPSY 7385207 YP_002554738.1 CDS Dtpsy_3309 NC_011992.1 3536868 3538904 D TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: ajs:Ajs_3959 transketolase; transketolase 3536868..3538904 Acidovorax ebreus TPSY 7385208 YP_002554739.1 CDS Dtpsy_3310 NC_011992.1 3538958 3539959 D KEGG: ajs:Ajs_3960 glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase, type I 3538958..3539959 Acidovorax ebreus TPSY 7385209 YP_002554740.1 CDS Dtpsy_3311 NC_011992.1 3540104 3540664 D PFAM: protein of unknown function DUF924; KEGG: ajs:Ajs_3961 hypothetical protein; protein of unknown function DUF924 3540104..3540664 Acidovorax ebreus TPSY 7385210 YP_002554741.1 CDS Dtpsy_3312 NC_011992.1 3540762 3541106 R KEGG: ajs:Ajs_3962 ribosomal subunit interface protein, putative; ribosomal subunit interface protein, putative complement(3540762..3541106) Acidovorax ebreus TPSY 7385211 YP_002554742.1 CDS Dtpsy_3313 NC_011992.1 3541279 3542196 D PFAM: glutamine amidotransferase class-I; peptidase C26; KEGG: ajs:Ajs_3963 peptidase C26; peptidase C26 3541279..3542196 Acidovorax ebreus TPSY 7385212 YP_002554743.1 CDS Dtpsy_3314 NC_011992.1 3542254 3542727 R KEGG: ajs:Ajs_3964 peptidylprolyl isomerase, FKBP-type; peptidylprolyl isomerase, FKBP-type complement(3542254..3542727) Acidovorax ebreus TPSY 7385213 YP_002554744.1 CDS Dtpsy_3315 NC_011992.1 3542839 3543882 R PFAM: Pirin domain protein; KEGG: ajs:Ajs_3965 pirin domain-containing protein; Pirin domain protein complement(3542839..3543882) Acidovorax ebreus TPSY 7385214 YP_002554745.1 CDS Dtpsy_3316 NC_011992.1 3544150 3544578 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 3-demethylubiquinone-9 3-methyltransferase; KEGG: ajs:Ajs_3966 3-demethylubiquinone-9 3-methyltransferase; 3-demethylubiquinone-9 3-methyltransferase complement(3544150..3544578) Acidovorax ebreus TPSY 7385215 YP_002554746.1 CDS Dtpsy_3317 NC_011992.1 3544621 3545022 R KEGG: ajs:Ajs_3967 hypothetical protein; hypothetical protein complement(3544621..3545022) Acidovorax ebreus TPSY 7385216 YP_002554747.1 CDS Dtpsy_3318 NC_011992.1 3545202 3546206 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ajs:Ajs_3968 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(3545202..3546206) Acidovorax ebreus TPSY 7385217 YP_002554748.1 CDS Dtpsy_3319 NC_011992.1 3546378 3546938 R KEGG: ajs:Ajs_3969 hypothetical protein; hypothetical protein complement(3546378..3546938) Acidovorax ebreus TPSY 7385218 YP_002554749.1 CDS Dtpsy_3320 NC_011992.1 3547003 3547854 R PFAM: DTW domain containing protein; KEGG: ajs:Ajs_3970 DTW domain-containing protein; DTW domain containing protein complement(3547003..3547854) Acidovorax ebreus TPSY 7385219 YP_002554750.1 CDS Dtpsy_3321 NC_011992.1 3547984 3548853 D PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: ajs:Ajs_3971 IclR family transcriptional regulator; transcriptional regulator, IclR family 3547984..3548853 Acidovorax ebreus TPSY 7385220 YP_002554751.1 CDS Dtpsy_3322 NC_011992.1 3548850 3550001 D KEGG: ajs:Ajs_3972 thiolase; thiolase 3548850..3550001 Acidovorax ebreus TPSY 7385221 YP_002554752.1 CDS Dtpsy_3323 NC_011992.1 3550007 3550384 D PFAM: protein of unknown function DUF35; KEGG: ajs:Ajs_3973 hypothetical protein; protein of unknown function DUF35 3550007..3550384 Acidovorax ebreus TPSY 7385222 YP_002554753.1 CDS Dtpsy_3324 NC_011992.1 3550566 3551552 D PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_3974 hypothetical protein; hypothetical protein 3550566..3551552 Acidovorax ebreus TPSY 7385223 YP_002554754.1 CDS Dtpsy_3325 NC_011992.1 3551756 3553843 D PFAM: CoA-binding domain protein; KEGG: ajs:Ajs_3975 CoA-binding domain-containing protein; CoA-binding domain protein 3551756..3553843 Acidovorax ebreus TPSY 7385224 YP_002554755.1 CDS Dtpsy_3326 NC_011992.1 3554048 3554665 R PFAM: Glutathione S-transferase domain; KEGG: ajs:Ajs_3976 glutathione S-transferase domain-containing protein; Glutathione S-transferase domain protein complement(3554048..3554665) Acidovorax ebreus TPSY 7385225 YP_002554756.1 CDS Dtpsy_3327 NC_011992.1 3554670 3555512 R PFAM: Integrase catalytic region; KEGG: mlo:mlr6150 transposase; Integrase catalytic region complement(3554670..3555512) Acidovorax ebreus TPSY 7385226 YP_002554757.1 CDS Dtpsy_3328 NC_011992.1 3555524 3555817 R PFAM: transposase IS3/IS911 family protein; KEGG: rpi:Rpic_2066 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein complement(3555524..3555817) Acidovorax ebreus TPSY 7385227 YP_002554758.1 CDS Dtpsy_3329 NC_011992.1 3555845 3556003 R KEGG: ajs:Ajs_3976 glutathione S-transferase domain-containing protein; hypothetical protein complement(3555845..3556003) Acidovorax ebreus TPSY 7385228 YP_002554759.1 CDS fabG NC_011992.1 3556019 3556780 R Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-(acyl-carrier-protein) reductase complement(3556019..3556780) Acidovorax ebreus TPSY 7385229 YP_002554760.1 CDS Dtpsy_3331 NC_011992.1 3556799 3557191 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ajs:Ajs_3978 glyoxalase/bleomycin resistance protein/dioxygenase; Glyoxalase/bleomycin resistance protein/dioxygenase complement(3556799..3557191) Acidovorax ebreus TPSY 7385230 YP_002554761.1 CDS Dtpsy_3332 NC_011992.1 3557419 3558561 R hypothetical protein complement(3557419..3558561) Acidovorax ebreus TPSY 7385231 YP_002554762.1 CDS Dtpsy_3333 NC_011992.1 3558652 3559293 R KEGG: shl:Shal_0526 hypothetical protein; hypothetical protein complement(3558652..3559293) Acidovorax ebreus TPSY 7385232 YP_002554763.1 CDS Dtpsy_3334 NC_011992.1 3559305 3559550 R PFAM: protein of unknown function DUF1010; KEGG: ajs:Ajs_3982 hypothetical protein; protein of unknown function DUF1010 complement(3559305..3559550) Acidovorax ebreus TPSY 7385233 YP_002554764.1 CDS Dtpsy_3335 NC_011992.1 3559567 3560037 R KEGG: psb:Psyr_3806 hypothetical protein; hypothetical protein complement(3559567..3560037) Acidovorax ebreus TPSY 7385234 YP_002554765.1 CDS Dtpsy_3336 NC_011992.1 3560780 3562006 D PFAM: transposase mutator type; KEGG: ajs:Ajs_2663 transposase, mutator type; transposase mutator type 3560780..3562006 Acidovorax ebreus TPSY 7385235 YP_002554766.1 CDS Dtpsy_3338 NC_011992.1 3562578 3562928 R KEGG: ajs:Ajs_3989 hypothetical protein; hypothetical protein complement(3562578..3562928) Acidovorax ebreus TPSY 7385237 YP_002554767.1 CDS Dtpsy_3339 NC_011992.1 3562933 3565878 R decatenates replicating daughter chromosomes; DNA topoisomerase III complement(3562933..3565878) Acidovorax ebreus TPSY 7385238 YP_002554768.1 CDS Dtpsy_3340 NC_011992.1 3565989 3566630 D PFAM: nuclear protein SET; SMART: nuclear protein SET; KEGG: ajs:Ajs_3991 nuclear protein SET; nuclear protein SET 3565989..3566630 Acidovorax ebreus TPSY 7385239 YP_002554769.1 CDS Dtpsy_3341 NC_011992.1 3566627 3567484 D TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; KEGG: ajs:Ajs_3992 biotin--acetyl-CoA-carboxylase ligase; biotin/acetyl-CoA-carboxylase ligase 3566627..3567484 Acidovorax ebreus TPSY 7385240 YP_002554770.1 CDS Dtpsy_3342 NC_011992.1 3567544 3568275 D PFAM: Sporulation domain protein; KEGG: ajs:Ajs_3993 sporulation domain-containing protein; Sporulation domain protein 3567544..3568275 Acidovorax ebreus TPSY 7385241 YP_002554771.1 CDS Dtpsy_3344 NC_011992.1 3568786 3569796 R PFAM: transposase IS4 family protein; KEGG: nmc:NMC0088 putative IS1106 transposase; transposase IS4 family protein complement(3568786..3569796) Acidovorax ebreus TPSY 7385243 YP_002554772.1 CDS Dtpsy_3345 NC_011992.1 3570928 3571866 R PFAM: N-formylglutamate amidohydrolase; KEGG: ajs:Ajs_3995 N-formylglutamate amidohydrolase; N-formylglutamate amidohydrolase complement(3570928..3571866) Acidovorax ebreus TPSY 7383584 YP_002554773.1 CDS Dtpsy_3346 NC_011992.1 3571885 3572850 R PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_3996 hypothetical protein; hypothetical protein complement(3571885..3572850) Acidovorax ebreus TPSY 7383585 YP_002554774.1 CDS Dtpsy_3347 NC_011992.1 3572961 3573887 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_3997 LysR family transcriptional regulator; transcriptional regulator, LysR family 3572961..3573887 Acidovorax ebreus TPSY 7383586 YP_002554775.1 CDS Dtpsy_3348 NC_011992.1 3573968 3575413 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ajs:Ajs_3998 integral membrane sensor signal transduction histidine kinase; histidine kinase complement(3573968..3575413) Acidovorax ebreus TPSY 7383587 YP_002554776.1 CDS Dtpsy_3349 NC_011992.1 3575493 3576167 R PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: ajs:Ajs_3999 two component transcriptional regulator; two component transcriptional regulator, winged helix family complement(3575493..3576167) Acidovorax ebreus TPSY 7383588 YP_002554777.1 CDS Dtpsy_3350 NC_011992.1 3576217 3576711 R PFAM: regulatory protein MarR; KEGG: ajs:Ajs_4000 MarR family transcriptional regulator; transcriptional regulator, MarR family complement(3576217..3576711) Acidovorax ebreus TPSY 7383589 YP_002554778.1 CDS Dtpsy_3351 NC_011992.1 3576861 3577982 D KEGG: ajs:Ajs_4001 RecA protein; TIGRFAM: recA protein; PFAM: RecA domain protein; SMART: AAA ATPase; recA protein 3576861..3577982 Acidovorax ebreus TPSY 7383590 YP_002554779.1 CDS Dtpsy_3352 NC_011992.1 3578064 3578519 D KEGG: ajs:Ajs_4002 regulatory protein RecX; regulatory protein RecX 3578064..3578519 Acidovorax ebreus TPSY 7383591 YP_002554780.1 CDS Dtpsy_3353 NC_011992.1 3578768 3581122 R KEGG: ajs:Ajs_4003 hypothetical protein; hypothetical protein complement(3578768..3581122) Acidovorax ebreus TPSY 7383592 YP_002554781.1 CDS secF NC_011992.1 3581206 3582159 R forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF complement(3581206..3582159) Acidovorax ebreus TPSY 7383593 YP_002554782.1 CDS secD NC_011992.1 3582174 3584072 R part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD complement(3582174..3584072) Acidovorax ebreus TPSY 7383594 YP_002554783.1 CDS Dtpsy_3356 NC_011992.1 3584167 3584499 R TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: ajs:Ajs_4006 protein translocase subunit YajC; preprotein translocase, YajC subunit complement(3584167..3584499) Acidovorax ebreus TPSY 7383595 YP_002554784.1 CDS Dtpsy_3357 NC_011992.1 3584891 3586021 D PFAM: MscS Mechanosensitive ion channel; KEGG: ajs:Ajs_4007 MscS mechanosensitive ion channel; MscS Mechanosensitive ion channel 3584891..3586021 Acidovorax ebreus TPSY 7383596 YP_002554785.1 CDS Dtpsy_3358 NC_011992.1 3586105 3589788 R Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; indolepyruvate ferredoxin oxidoreductase complement(3586105..3589788) Acidovorax ebreus TPSY 7383597 YP_002554786.1 CDS Dtpsy_3359 NC_011992.1 3589965 3590471 D PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: ajs:Ajs_4009 AsnC family transcriptional regulator; transcriptional regulator, AsnC family 3589965..3590471 Acidovorax ebreus TPSY 7383598 YP_002554787.1 CDS Dtpsy_3360 NC_011992.1 3590773 3591630 D KEGG: ajs:Ajs_4010 hypothetical protein; hypothetical protein 3590773..3591630 Acidovorax ebreus TPSY 7383599 YP_002554788.1 CDS Dtpsy_3361 NC_011992.1 3591627 3593027 D KEGG: ajs:Ajs_4011 hypothetical protein; hypothetical protein 3591627..3593027 Acidovorax ebreus TPSY 7383600 YP_002554789.1 CDS Dtpsy_3362 NC_011992.1 3593102 3594811 D PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: ajs:Ajs_4012 protein of unknown function DUF894, DitE; protein of unknown function DUF894 DitE 3593102..3594811 Acidovorax ebreus TPSY 7383601 YP_002554790.1 CDS Dtpsy_3363 NC_011992.1 3594920 3596062 R PFAM: MltA domain protein; 3D domain protein; KEGG: ajs:Ajs_4013 MltA domain-containing protein; MltA domain protein complement(3594920..3596062) Acidovorax ebreus TPSY 7383602 YP_002554791.1 CDS Dtpsy_3364 NC_011992.1 3596401 3597051 D PFAM: OmpA/MotB domain protein; KEGG: ajs:Ajs_4014 OmpA/MotB domain-containing protein; OmpA/MotB domain protein 3596401..3597051 Acidovorax ebreus TPSY 7383603 YP_002554792.1 CDS Dtpsy_3365 NC_011992.1 3597140 3597790 R PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; response regulator receiver; KEGG: ajs:Ajs_4015 response regulator receiver protein; two component transcriptional regulator, LuxR family complement(3597140..3597790) Acidovorax ebreus TPSY 7383604 YP_002554793.1 CDS Dtpsy_3366 NC_011992.1 3597790 3599940 R KEGG: ajs:Ajs_4016 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS/PAC sensor signal transduction histidine kinase complement(3597790..3599940) Acidovorax ebreus TPSY 7383605 YP_002554794.1 CDS Dtpsy_3367 NC_011992.1 3599940 3600755 R PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: ajs:Ajs_4017 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(3599940..3600755) Acidovorax ebreus TPSY 7383606 YP_002554795.1 CDS Dtpsy_3368 NC_011992.1 3600752 3604888 R KEGG: ajs:Ajs_4018 hypothetical protein; hypothetical protein complement(3600752..3604888) Acidovorax ebreus TPSY 7383607 YP_002554796.1 CDS Dtpsy_3369 NC_011992.1 3605011 3607749 D PFAM: glutamate-ammonia ligase adenylyltransferase; GlnD PII-uridylyltransferase; KEGG: ajs:Ajs_4019 (glutamate--ammonia-ligase) adenylyltransferase; (Glutamate--ammonia-ligase) adenylyltransferase 3605011..3607749 Acidovorax ebreus TPSY 7383608 YP_002554797.1 CDS Dtpsy_3370 NC_011992.1 3607990 3608676 D PFAM: regulatory protein TetR; KEGG: ajs:Ajs_4020 TetR family transcriptional regulator; transcriptional regulator, TetR family 3607990..3608676 Acidovorax ebreus TPSY 7383609 YP_002554798.1 CDS Dtpsy_3371 NC_011992.1 3608673 3610127 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: ajs:Ajs_4021 RND efflux system outer membrane lipoprotein; RND efflux system, outer membrane lipoprotein, NodT family 3608673..3610127 Acidovorax ebreus TPSY 7383610 YP_002554799.1 CDS Dtpsy_3372 NC_011992.1 3610144 3611316 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: ajs:Ajs_4022 RND family efflux transporter MFP subunit; efflux transporter, RND family, MFP subunit 3610144..3611316 Acidovorax ebreus TPSY 7383611 YP_002554800.1 CDS Dtpsy_3373 NC_011992.1 3611326 3614421 D PFAM: acriflavin resistance protein; KEGG: ajs:Ajs_4023 acriflavin resistance protein; acriflavin resistance protein 3611326..3614421 Acidovorax ebreus TPSY 7383612 YP_002554801.1 CDS Dtpsy_3374 NC_011992.1 3614635 3615222 D PFAM: glutathione peroxidase; KEGG: ajs:Ajs_4024 glutathione peroxidase; glutathione peroxidase 3614635..3615222 Acidovorax ebreus TPSY 7383613 YP_002554802.1 CDS Dtpsy_3375 NC_011992.1 3615517 3616131 R PFAM: Glutathione S-transferase domain; KEGG: ajs:Ajs_4025 glutathione S-transferase domain-containing protein; Glutathione S-transferase domain protein complement(3615517..3616131) Acidovorax ebreus TPSY 7383614 YP_002554803.1 CDS Dtpsy_3376 NC_011992.1 3616249 3617628 D Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 3616249..3617628 Acidovorax ebreus TPSY 7383615 YP_002554804.1 CDS Dtpsy_3377 NC_011992.1 3617706 3618266 D PFAM: YaeQ family protein; KEGG: ajs:Ajs_4027 YaeQ family protein; YaeQ family protein 3617706..3618266 Acidovorax ebreus TPSY 7383616 YP_002554805.1 CDS Dtpsy_3378 NC_011992.1 3618340 3618645 R KEGG: ajs:Ajs_4028 hypothetical protein; hypothetical protein complement(3618340..3618645) Acidovorax ebreus TPSY 7383617 YP_002554806.1 CDS Dtpsy_3379 NC_011992.1 3618686 3619129 R PFAM: protein of unknown function DUF1289; KEGG: ajs:Ajs_4029 hypothetical protein; protein of unknown function DUF1289 complement(3618686..3619129) Acidovorax ebreus TPSY 7383618 YP_002554807.1 CDS Dtpsy_3380 NC_011992.1 3619653 3620384 D PFAM: Integral membrane protein TerC; KEGG: ajs:Ajs_4030 integral membrane protein TerC; Integral membrane protein TerC 3619653..3620384 Acidovorax ebreus TPSY 7383619 YP_002554808.1 CDS Dtpsy_3381 NC_011992.1 3620433 3620906 D KEGG: ajs:Ajs_4031 hypothetical protein; hypothetical protein 3620433..3620906 Acidovorax ebreus TPSY 7383620 YP_002554809.1 CDS Dtpsy_3382 NC_011992.1 3621037 3621405 D PFAM: membrane protein of unknown function; KEGG: ajs:Ajs_4032 membrane protein of unknown function; membrane protein of unknown function 3621037..3621405 Acidovorax ebreus TPSY 7383621 YP_002554810.1 CDS Dtpsy_3383 NC_011992.1 3621373 3622938 R PFAM: peptidase M48 Ste24p; KEGG: ajs:Ajs_4033 peptidase M48, Ste24p; peptidase M48 Ste24p complement(3621373..3622938) Acidovorax ebreus TPSY 7383622 YP_002554811.1 CDS Dtpsy_3384 NC_011992.1 3623050 3623541 D TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: ajs:Ajs_4034 GTP cyclohydrolase subunit MoaC; molybdenum cofactor biosynthesis protein C 3623050..3623541 Acidovorax ebreus TPSY 7383623 YP_002554812.1 CDS Dtpsy_3385 NC_011992.1 3623559 3624158 R KEGG: fgenesh4_pg.C_scaffold_2883000002.; fgenesh4_pg.C_scaffold_2883000002 complement(3623559..3624158) Acidovorax ebreus TPSY 7383624 YP_002554813.1 CDS Dtpsy_3386 NC_011992.1 3624162 3624950 R KEGG: ngk:NGK_0721 FimB; FimB complement(3624162..3624950) Acidovorax ebreus TPSY 7383625 YP_002554814.1 CDS Dtpsy_3387 NC_011992.1 3625019 3625609 R KEGG: fgenesh4_pg.C_scaffold_2883000002.; fgenesh4_pg.C_scaffold_2883000002 complement(3625019..3625609) Acidovorax ebreus TPSY 7383626 YP_002554815.1 CDS Dtpsy_3388 NC_011992.1 3625953 3626588 R PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; KEGG: ajs:Ajs_4043 FHA domain-containing protein; FHA domain containing protein complement(3625953..3626588) Acidovorax ebreus TPSY 7383627 YP_002554816.1 CDS Dtpsy_3389 NC_011992.1 3626693 3627508 R PFAM: Stage II sporulation E family protein; Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: ajs:Ajs_4044 protein phosphatase 2C domain-containing protein; protein serine/threonine phosphatase complement(3626693..3627508) Acidovorax ebreus TPSY 7383628 YP_002554817.1 CDS Dtpsy_3390 NC_011992.1 3627792 3628475 R PFAM: Integral membrane protein TerC; KEGG: ajs:Ajs_4045 integral membrane protein TerC; Integral membrane protein TerC complement(3627792..3628475) Acidovorax ebreus TPSY 7383629 YP_002554818.1 CDS Dtpsy_3391 NC_011992.1 3628631 3629524 R Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha complement(3628631..3629524) Acidovorax ebreus TPSY 7383630 YP_002554819.1 CDS sucC NC_011992.1 3629544 3630704 R catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta complement(3629544..3630704) Acidovorax ebreus TPSY 7383631 YP_002554820.1 CDS Dtpsy_3393 NC_011992.1 3630880 3631812 D catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis; N-acetyl-gamma-glutamyl-phosphate reductase 3630880..3631812 Acidovorax ebreus TPSY 7383632 YP_002554821.1 CDS Dtpsy_3394 NC_011992.1 3632024 3633184 R TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: ajs:Ajs_4049 fis family transcriptional regulator; DNA protecting protein DprA complement(3632024..3633184) Acidovorax ebreus TPSY 7383633 YP_002554822.1 CDS Dtpsy_3395 NC_011992.1 3633237 3634496 R PFAM: Peptidoglycan-binding LysM; SMART: Peptidoglycan-binding LysM; KEGG: ajs:Ajs_4050 peptidoglycan-binding LysM; Peptidoglycan-binding LysM complement(3633237..3634496) Acidovorax ebreus TPSY 7383634 YP_002554823.1 CDS Dtpsy_3396 NC_011992.1 3634699 3635211 D KEGG: ajs:Ajs_4051 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; peptide deformylase 3634699..3635211 Acidovorax ebreus TPSY 7383635 YP_002554824.1 CDS Dtpsy_3397 NC_011992.1 3635208 3635723 D KEGG: ajs:Ajs_4052 putative lipoprotein transmembrane; putative lipoprotein transmembrane 3635208..3635723 Acidovorax ebreus TPSY 7383636 YP_002554825.1 CDS Dtpsy_3398 NC_011992.1 3635757 3636728 D TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: ajs:Ajs_4053 methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase 3635757..3636728 Acidovorax ebreus TPSY 7383637 YP_002554826.1 CDS Dtpsy_3399 NC_011992.1 3636725 3637474 D PFAM: AzlC family protein; KEGG: ajs:Ajs_4054 AzlC family protein; AzlC family protein 3636725..3637474 Acidovorax ebreus TPSY 7383638 YP_002554827.1 CDS Dtpsy_3400 NC_011992.1 3637471 3637806 D PFAM: branched-chain amino acid transport; KEGG: ajs:Ajs_4055 branched-chain amino acid transport; branched-chain amino acid transport 3637471..3637806 Acidovorax ebreus TPSY 7383639 YP_002554828.1 CDS pgk NC_011992.1 3637896 3639089 D Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 3637896..3639089 Acidovorax ebreus TPSY 7383640 YP_002554829.1 CDS Dtpsy_3402 NC_011992.1 3639157 3640056 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: ajs:Ajs_4057 hypothetical protein; protein of unknown function DUF6 transmembrane complement(3639157..3640056) Acidovorax ebreus TPSY 7383641 YP_002554830.1 CDS pyrF NC_011992.1 3640122 3640988 D type 2 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 3640122..3640988 Acidovorax ebreus TPSY 7383642 YP_002554831.1 CDS Dtpsy_3404 NC_011992.1 3641006 3641902 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: dac:Daci_0823 LysR family transcriptional regulator; transcriptional regulator, LysR family 3641006..3641902 Acidovorax ebreus TPSY 7383643 YP_002554832.1 CDS Dtpsy_3405 NC_011992.1 3642024 3643016 D PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_4060 hypothetical protein; hypothetical protein 3642024..3643016 Acidovorax ebreus TPSY 7383644 YP_002554833.1 CDS Dtpsy_3406 NC_011992.1 3643013 3643987 D KEGG: ajs:Ajs_4061 hypothetical protein; hypothetical protein 3643013..3643987 Acidovorax ebreus TPSY 7383645 YP_002554834.1 CDS Dtpsy_3407 NC_011992.1 3644301 3646262 D PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; SMART: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: ajs:Ajs_4062 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3644301..3646262 Acidovorax ebreus TPSY 7383646 YP_002554835.1 CDS Dtpsy_3408 NC_011992.1 3646324 3647817 R TIGRFAM: SSS sodium solute transporter superfamily; sodium/proline symporter; PFAM: Na+/solute symporter; KEGG: ajs:Ajs_4063 sodium/proline symporter; sodium/proline symporter complement(3646324..3647817) Acidovorax ebreus TPSY 7383647 YP_002554836.1 CDS Dtpsy_3409 NC_011992.1 3648053 3651142 R TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: ajs:Ajs_4064 excinuclease ABC subunit A; excinuclease ABC, A subunit complement(3648053..3651142) Acidovorax ebreus TPSY 7383648 YP_002554837.1 CDS Dtpsy_3410 NC_011992.1 3651433 3652614 D PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_4065 major facilitator superfamily transporter; major facilitator superfamily MFS_1 3651433..3652614 Acidovorax ebreus TPSY 7383649 YP_002554838.1 CDS Dtpsy_3411 NC_011992.1 3652749 3653294 D TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: ajs:Ajs_4066 single-strand binding protein; single-strand binding protein 3652749..3653294 Acidovorax ebreus TPSY 7383650 YP_002554839.1 CDS Dtpsy_3412 NC_011992.1 3653402 3655063 R TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: ajs:Ajs_4067 L-lactate transport; L-lactate transport complement(3653402..3655063) Acidovorax ebreus TPSY 7383651 YP_002554840.1 CDS mnmA NC_011992.1 3655301 3656413 R catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA complement(3655301..3656413) Acidovorax ebreus TPSY 7383652 YP_002554841.1 CDS Dtpsy_3414 NC_011992.1 3656480 3657454 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_4069 LysR family transcriptional regulator; transcriptional regulator, LysR family 3656480..3657454 Acidovorax ebreus TPSY 7383653 YP_002554842.1 CDS Dtpsy_3415 NC_011992.1 3657611 3659050 D catalyzes the oxidation of tricarballylate to cis-aconitate; FAD-dependent; required for the utilization of tricarballylate as a carbon and energy source by S. enterica; tricarballylate dehydrogenase 3657611..3659050 Acidovorax ebreus TPSY 7383654 YP_002554843.1 CDS Dtpsy_3416 NC_011992.1 3659056 3660282 D TIGRFAM: CitB domain protein; KEGG: ajs:Ajs_4071 CitB domain-containing protein; CitB domain protein 3659056..3660282 Acidovorax ebreus TPSY 7383655 YP_002554844.1 CDS Dtpsy_3417 NC_011992.1 3660367 3661344 D PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_4073 hypothetical protein; hypothetical protein 3660367..3661344 Acidovorax ebreus TPSY 7383656 YP_002554845.1 CDS Dtpsy_3418 NC_011992.1 3661377 3663098 R PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: dac:Daci_1100 putative sigma54 specific transcriptional regulator; sigma54 specific transcriptional regulator, Fis family complement(3661377..3663098) Acidovorax ebreus TPSY 7383657 YP_002554846.1 CDS Dtpsy_3419 NC_011992.1 3663189 3664736 D PFAM: carboxyl transferase; KEGG: dac:Daci_1099 propionyl-CoA carboxylase; Propionyl-CoA carboxylase 3663189..3664736 Acidovorax ebreus TPSY 7383658 YP_002554847.1 CDS Dtpsy_3420 NC_011992.1 3664817 3665818 D PFAM: conserved hypothetical protein; KEGG: dac:Daci_1098 hypothetical protein; hypothetical protein 3664817..3665818 Acidovorax ebreus TPSY 7383659 YP_002554848.1 CDS Dtpsy_3421 NC_011992.1 3665832 3667904 D PFAM: CoA-binding domain protein; KEGG: dac:Daci_1097 CoA-binding domain-containing protein; CoA-binding domain protein 3665832..3667904 Acidovorax ebreus TPSY 7383660 YP_002554849.1 CDS Dtpsy_3422 NC_011992.1 3667901 3669262 D PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: dac:Daci_1096 carbamoyl-phosphate synthase L chain ATP-binding; Pyruvate carboxylase 3667901..3669262 Acidovorax ebreus TPSY 7383661 YP_002554850.1 CDS Dtpsy_3423 NC_011992.1 3669274 3669486 D PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: dac:Daci_1095 biotin/lipoyl attachment domain-containing protein; biotin/lipoyl attachment domain-containing protein 3669274..3669486 Acidovorax ebreus TPSY 7383662 YP_002554851.1 CDS Dtpsy_3424 NC_011992.1 3669483 3669917 D PFAM: thioesterase superfamily protein; KEGG: dac:Daci_1094 thioesterase superfamily protein; thioesterase superfamily protein 3669483..3669917 Acidovorax ebreus TPSY 7383663 YP_002554852.1 CDS Dtpsy_3425 NC_011992.1 3669948 3670433 R PFAM: NUDIX hydrolase; KEGG: ajs:Ajs_4074 NUDIX hydrolase; NUDIX hydrolase complement(3669948..3670433) Acidovorax ebreus TPSY 7383664 YP_002554853.1 CDS Dtpsy_3426 NC_011992.1 3670537 3670923 D KEGG: vei:Veis_4931 hypothetical protein; hypothetical protein 3670537..3670923 Acidovorax ebreus TPSY 7383183 YP_002554854.1 CDS Dtpsy_3427 NC_011992.1 3671025 3673121 D TIGRFAM: TonB-dependent copper receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ajs:Ajs_4075 TonB-dependent copper receptor; TonB-dependent copper receptor 3671025..3673121 Acidovorax ebreus TPSY 7381961 YP_002554855.1 CDS Dtpsy_3428 NC_011992.1 3673228 3673728 R PFAM: GCN5-related N-acetyltransferase; KEGG: ajs:Ajs_4076 GCN5-related N-acetyltransferase; GCN5-related N-acetyltransferase complement(3673228..3673728) Acidovorax ebreus TPSY 7381962 YP_002554856.1 CDS Dtpsy_3429 NC_011992.1 3673725 3674441 R catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha complement(3673725..3674441) Acidovorax ebreus TPSY 7381963 YP_002554857.1 CDS Dtpsy_3430 NC_011992.1 3674489 3675883 R PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: ajs:Ajs_4082 integral membrane sensor signal transduction histidine kinase; histidine kinase complement(3674489..3675883) Acidovorax ebreus TPSY 7381964 YP_002554858.1 CDS Dtpsy_3431 NC_011992.1 3675880 3676551 R PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: ajs:Ajs_4083 two component transcriptional regulator; two component transcriptional regulator, winged helix family complement(3675880..3676551) Acidovorax ebreus TPSY 7381965 YP_002554859.1 CDS Dtpsy_3432 NC_011992.1 3676551 3676868 R PFAM: Propeptide PepSY amd peptidase M4; KEGG: ajs:Ajs_4084 membrane protein; Propeptide PepSY amd peptidase M4 complement(3676551..3676868) Acidovorax ebreus TPSY 7381966 YP_002554860.1 CDS Dtpsy_3433 NC_011992.1 3677017 3678399 D PFAM: Oxidoreductase FAD-binding domain protein; FAD-binding 8 domain protein; Ferric reductase domain protein transmembrane component domain; KEGG: ajs:Ajs_4085 ferric reductase domain-containing protein; Ferric reductase domain protein transmembrane component 3677017..3678399 Acidovorax ebreus TPSY 7381967 YP_002554861.1 CDS Dtpsy_3434 NC_011992.1 3678420 3678851 D KEGG: ajs:Ajs_4086 hypothetical protein; hypothetical protein 3678420..3678851 Acidovorax ebreus TPSY 7381968 YP_002554862.1 CDS Dtpsy_3435 NC_011992.1 3678878 3679360 D KEGG: ajs:Ajs_4087 hypothetical protein; hypothetical protein 3678878..3679360 Acidovorax ebreus TPSY 7381969 YP_002554863.1 CDS Dtpsy_3436 NC_011992.1 3679375 3681552 D PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; PepSY-associated TM helix domain protein; flavodoxin/nitric oxide synthase; Oxidoreductase FAD-binding domain protein; KEGG: ajs:Ajs_4088 oxidoreductase FAD/NAD(P)-binding subunit; oxidoreductase FAD/NAD(P)-binding domain protein 3679375..3681552 Acidovorax ebreus TPSY 7381970 YP_002554864.1 CDS Dtpsy_3437 NC_011992.1 3681533 3682516 D PFAM: ApbE family lipoprotein; KEGG: ajs:Ajs_4089 ApbE family lipoprotein; ApbE family lipoprotein 3681533..3682516 Acidovorax ebreus TPSY 7381971 YP_002554865.1 CDS Dtpsy_3438 NC_011992.1 3682619 3682936 D KEGG: ajs:Ajs_4090 hypothetical protein; hypothetical protein 3682619..3682936 Acidovorax ebreus TPSY 7381972 YP_002554866.1 CDS Dtpsy_3439 NC_011992.1 3682973 3683440 R KEGG: ajs:Ajs_4091 hypothetical protein; hypothetical protein complement(3682973..3683440) Acidovorax ebreus TPSY 7381973 YP_002554867.1 CDS Dtpsy_3440 NC_011992.1 3683693 3684301 D KEGG: nca:Noca_1621 hypothetical protein; hypothetical protein 3683693..3684301 Acidovorax ebreus TPSY 7381974 YP_002554868.1 CDS Dtpsy_3441 NC_011992.1 3684301 3684750 D TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; KEGG: cpf:CPF_0312 signal peptidase I; signal peptidase I 3684301..3684750 Acidovorax ebreus TPSY 7381975 YP_002554869.1 CDS Dtpsy_3442 NC_011992.1 3684747 3685352 D KEGG: tbd:Tbd_2177 hypothetical protein; hypothetical protein 3684747..3685352 Acidovorax ebreus TPSY 7381976 YP_002554870.1 CDS Dtpsy_3443 NC_011992.1 3685356 3686045 D PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: bte:BTH_I1801 cyclic nucleotide-binding domain-containing protein; transcriptional regulator, Crp/Fnr family 3685356..3686045 Acidovorax ebreus TPSY 7381977 YP_002554871.1 CDS Dtpsy_3444 NC_011992.1 3686164 3688743 D TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: pna:Pnap_3565 ATPase, P-type (transporting), HAD superfamily, subfamily IC; ATPase, P-type (transporting), HAD superfamily, subfamily IC 3686164..3688743 Acidovorax ebreus TPSY 7381978 YP_002554872.1 CDS Dtpsy_3446 NC_011992.1 3690613 3692145 R catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase complement(3690613..3692145) Acidovorax ebreus TPSY 7381980 YP_002554873.1 CDS Dtpsy_3447 NC_011992.1 3692303 3692524 R PFAM: protein of unknown function DUF350; KEGG: ajs:Ajs_4097 hypothetical protein; protein of unknown function DUF350 complement(3692303..3692524) Acidovorax ebreus TPSY 7381981 YP_002554874.1 CDS Dtpsy_3448 NC_011992.1 3692574 3694070 R KEGG: ajs:Ajs_4098 putative transmembrane protein; putative transmembrane protein complement(3692574..3694070) Acidovorax ebreus TPSY 7381982 YP_002554875.1 CDS Dtpsy_3449 NC_011992.1 3694153 3695214 R PFAM: band 7 protein; KEGG: ajs:Ajs_4099 putative transmembrane protein; band 7 protein complement(3694153..3695214) Acidovorax ebreus TPSY 7381983 YP_002554876.1 CDS Dtpsy_3450 NC_011992.1 3695374 3695634 D KEGG: ajs:Ajs_4100 hypothetical protein; hypothetical protein 3695374..3695634 Acidovorax ebreus TPSY 7381984 YP_002554877.1 CDS Dtpsy_3451 NC_011992.1 3695732 3696586 D KEGG: eba:ebA175 hypothetical protein; hypothetical protein 3695732..3696586 Acidovorax ebreus TPSY 7381985 YP_002554878.1 CDS Dtpsy_3452 NC_011992.1 3696589 3697812 D KEGG: tcx:Tcr_0235 hypothetical protein; hypothetical protein 3696589..3697812 Acidovorax ebreus TPSY 7381986 YP_002554879.1 CDS Dtpsy_3453 NC_011992.1 3697832 3698155 R PFAM: flagellar basal body rod protein; KEGG: ajs:Ajs_4101 flagellar basal body rod protein; flagellar basal body rod protein complement(3697832..3698155) Acidovorax ebreus TPSY 7381987 YP_002554880.1 CDS Dtpsy_3454 NC_011992.1 3698217 3699161 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_4102 LysR family transcriptional regulator; transcriptional regulator, LysR family complement(3698217..3699161) Acidovorax ebreus TPSY 7381988 YP_002554881.1 CDS Dtpsy_3455 NC_011992.1 3699248 3700606 D catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate; beta alanine--pyruvate transaminase 3699248..3700606 Acidovorax ebreus TPSY 7381989 YP_002554882.1 CDS Dtpsy_3456 NC_011992.1 3700674 3702191 D TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: ajs:Ajs_4104 methylmalonate-semialdehyde dehydrogenase [acylating]; methylmalonate-semialdehyde dehydrogenase 3700674..3702191 Acidovorax ebreus TPSY 7381990 YP_002554883.1 CDS Dtpsy_3457 NC_011992.1 3702295 3703257 R PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH; KEGG: dac:Daci_6022 GntR domain-containing protein; GntR domain protein complement(3702295..3703257) Acidovorax ebreus TPSY 7381991 YP_002554884.1 CDS Dtpsy_3458 NC_011992.1 3703414 3704619 D PFAM: Extracellular ligand-binding receptor; KEGG: dac:Daci_6023 branched chain amino acid ABC transporter periplasmic ligand-binding protein; Extracellular ligand-binding receptor 3703414..3704619 Acidovorax ebreus TPSY 7381992 YP_002554885.1 CDS Dtpsy_3459 NC_011992.1 3704703 3705563 D PFAM: inner-membrane translocator; KEGG: dac:Daci_6024 inner-membrane translocator; inner-membrane translocator 3704703..3705563 Acidovorax ebreus TPSY 7381993 YP_002554886.1 CDS Dtpsy_3460 NC_011992.1 3705566 3706573 D PFAM: inner-membrane translocator; KEGG: dac:Daci_6025 inner-membrane translocator; inner-membrane translocator 3705566..3706573 Acidovorax ebreus TPSY 7381994 YP_002554887.1 CDS Dtpsy_3461 NC_011992.1 3706570 3707349 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dac:Daci_6026 ABC transporter related; ABC transporter related 3706570..3707349 Acidovorax ebreus TPSY 7381995 YP_002554888.1 CDS Dtpsy_3462 NC_011992.1 3707346 3708053 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dac:Daci_6027 ABC transporter related; ABC transporter related 3707346..3708053 Acidovorax ebreus TPSY 7381996 YP_002554889.1 CDS Dtpsy_3463 NC_011992.1 3708134 3709390 D KEGG: dac:Daci_6028 amidase; TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20; peptidase dimerisation domain protein; amidase, hydantoinase/carbamoylase family 3708134..3709390 Acidovorax ebreus TPSY 7381997 YP_002554890.1 CDS Dtpsy_3464 NC_011992.1 3709387 3710853 D PFAM: MlrC domain protein; Microcystin LR degradation protein MlrC-like; KEGG: dac:Daci_6029 MlrC domain-containing protein; Microcystin LR degradation protein MlrC-like protein 3709387..3710853 Acidovorax ebreus TPSY 7381998 YP_002554891.1 CDS Dtpsy_3465 NC_011992.1 3711020 3713329 D NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme 3711020..3713329 Acidovorax ebreus TPSY 7381999 YP_002554892.1 CDS Dtpsy_3466 NC_011992.1 3713484 3713888 D PFAM: guanine-specific ribonuclease N1 and T1; KEGG: ajs:Ajs_4107 guanine-specific ribonuclease N1 and T1; guanine-specific ribonuclease N1 and T1 3713484..3713888 Acidovorax ebreus TPSY 7382000 YP_002554893.1 CDS Dtpsy_3467 NC_011992.1 3714028 3714453 D PFAM: Barstar (barnase inhibitor); KEGG: ajs:Ajs_4108 hypothetical protein; Barstar (barnase inhibitor) 3714028..3714453 Acidovorax ebreus TPSY 7382001 YP_002554894.1 CDS ksgA NC_011992.1 3714748 3715509 R catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase complement(3714748..3715509) Acidovorax ebreus TPSY 7382002 YP_002554895.1 CDS Dtpsy_3469 NC_011992.1 3715506 3716921 R PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: ajs:Ajs_4111 PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain protein complement(3715506..3716921) Acidovorax ebreus TPSY 7382003 YP_002554896.1 CDS Dtpsy_3470 NC_011992.1 3716967 3719342 R PFAM: Organic solvent tolerance protein; KEGG: ajs:Ajs_4112 organic solvent tolerance protein; Organic solvent tolerance protein complement(3716967..3719342) Acidovorax ebreus TPSY 7382004 YP_002554897.1 CDS Dtpsy_3471 NC_011992.1 3719507 3720670 D PFAM: aminoglycoside phosphotransferase; KEGG: ajs:Ajs_4113 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 3719507..3720670 Acidovorax ebreus TPSY 7382005 YP_002554898.1 CDS Dtpsy_3472 NC_011992.1 3720738 3721466 D in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 3720738..3721466 Acidovorax ebreus TPSY 7382006 YP_002554899.1 CDS Dtpsy_3473 NC_011992.1 3721466 3722893 D KEGG: ajs:Ajs_4115 hypothetical protein; hypothetical protein 3721466..3722893 Acidovorax ebreus TPSY 7382007 YP_002554900.1 CDS Dtpsy_3474 NC_011992.1 3722886 3723608 D KEGG: ajs:Ajs_4116 hypothetical protein; hypothetical protein 3722886..3723608 Acidovorax ebreus TPSY 7382008 YP_002554901.1 CDS Dtpsy_3475 NC_011992.1 3723614 3726448 D PFAM: SMC domain protein; KEGG: ajs:Ajs_4117 SMC domain-containing protein; SMC domain protein 3723614..3726448 Acidovorax ebreus TPSY 7382009 YP_002554902.1 CDS Dtpsy_3477 NC_011992.1 3727071 3728099 D KEGG: ajs:Ajs_4119 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase 3727071..3728099 Acidovorax ebreus TPSY 7382011 YP_002554903.1 CDS Dtpsy_3478 NC_011992.1 3728167 3729042 R PFAM: alpha/beta hydrolase fold; KEGG: ajs:Ajs_4120 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(3728167..3729042) Acidovorax ebreus TPSY 7382012 YP_002554904.1 CDS Dtpsy_3479 NC_011992.1 3729057 3730520 R PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: ajs:Ajs_4121 peptidase M20; peptidase M20 complement(3729057..3730520) Acidovorax ebreus TPSY 7382013 YP_002554905.1 CDS Dtpsy_3480 NC_011992.1 3730603 3731790 R KEGG: ajs:Ajs_4122 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(3730603..3731790) Acidovorax ebreus TPSY 7382014 YP_002554906.1 CDS Dtpsy_3481 NC_011992.1 3731871 3733895 R PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; SMART: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: ajs:Ajs_4123 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(3731871..3733895) Acidovorax ebreus TPSY 7382015 YP_002554907.1 CDS Dtpsy_3482 NC_011992.1 3734151 3734735 R TIGRFAM: methionine biosynthesis protein MetW; PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: ajs:Ajs_4124 methionine biosynthesis protein MetW; methionine biosynthesis protein MetW complement(3734151..3734735) Acidovorax ebreus TPSY 7382016 YP_002554908.1 CDS metX NC_011992.1 3734732 3735871 R Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine; homoserine O-acetyltransferase complement(3734732..3735871) Acidovorax ebreus TPSY 7382017 YP_002554909.1 CDS Dtpsy_3484 NC_011992.1 3736008 3736586 R PFAM: protein of unknown function UPF0016; KEGG: ajs:Ajs_4126 hypothetical protein; protein of unknown function UPF0016 complement(3736008..3736586) Acidovorax ebreus TPSY 7382018 YP_002554910.1 CDS Dtpsy_3485 NC_011992.1 3737066 3737431 D PFAM: RNP-1 like RNA-binding protein; SMART: RNP-1 like RNA-binding protein; KEGG: ajs:Ajs_4127 RNP-1 like RNA-binding protein; RNP-1 like RNA-binding protein 3737066..3737431 Acidovorax ebreus TPSY 7382019 YP_002554911.1 CDS Dtpsy_3486 NC_011992.1 3737672 3738139 D PFAM: RNP-1 like RNA-binding protein; SMART: RNP-1 like RNA-binding protein; KEGG: ajs:Ajs_4128 RNP-1 like RNA-binding protein; RNP-1 like RNA-binding protein 3737672..3738139 Acidovorax ebreus TPSY 7382020 YP_002554912.1 CDS Dtpsy_3487 NC_011992.1 3738213 3739025 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ajs:Ajs_4129 short chain dehydrogenase; short chain dehydrogenase complement(3738213..3739025) Acidovorax ebreus TPSY 7382021 YP_002554913.1 CDS Dtpsy_3488 NC_011992.1 3739031 3739651 R PFAM: protein of unknown function DUF1239; KEGG: ajs:Ajs_4130 hypothetical protein; protein of unknown function DUF1239 complement(3739031..3739651) Acidovorax ebreus TPSY 7382022 YP_002554914.1 CDS Dtpsy_3489 NC_011992.1 3739648 3740226 R TIGRFAM: hydrolase, HAD-superfamily, subfamily IIIA; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; KEGG: ajs:Ajs_4131 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family complement(3739648..3740226) Acidovorax ebreus TPSY 7382023 YP_002554915.1 CDS Dtpsy_3490 NC_011992.1 3740226 3741227 R KEGG: ajs:Ajs_4132 KpsF/GutQ family protein; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS); SMART: CBS domain containing protein; KpsF/GutQ family protein complement(3740226..3741227) Acidovorax ebreus TPSY 7382024 YP_002554916.1 CDS Dtpsy_3491 NC_011992.1 3741276 3743261 D TIGRFAM: potassium efflux system protein; PFAM: TrkA-N domain protein; TrkA-C domain protein; sodium/hydrogen exchanger; KEGG: ajs:Ajs_4133 potassium efflux system protein; potassium efflux system protein 3741276..3743261 Acidovorax ebreus TPSY 7382025 YP_002554917.1 CDS Dtpsy_3492 NC_011992.1 3743332 3743886 D catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 3743332..3743886 Acidovorax ebreus TPSY 7382026 YP_002554918.1 CDS Dtpsy_3493 NC_011992.1 3743922 3744758 R KEGG: ajs:Ajs_4136 hypothetical protein; hypothetical protein complement(3743922..3744758) Acidovorax ebreus TPSY 7382027 YP_002554919.1 CDS Dtpsy_3494 NC_011992.1 3744896 3745417 R PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: ajs:Ajs_4137 cyclic nucleotide-binding protein; cyclic nucleotide-binding protein complement(3744896..3745417) Acidovorax ebreus TPSY 7382028 YP_002554920.1 CDS trmE NC_011992.1 3745475 3746878 R in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE complement(3745475..3746878) Acidovorax ebreus TPSY 7382029 YP_002554921.1 CDS Dtpsy_3496 NC_011992.1 3747218 3747463 R KEGG: rpi:Rpic_2654 hypothetical protein; hypothetical protein complement(3747218..3747463) Acidovorax ebreus TPSY 7382030 YP_002554922.1 CDS Dtpsy_3497 NC_011992.1 3747460 3748731 R PFAM: conjugation TrbI family protein; KEGG: rpi:Rpic_2653 conjugation TrbI family protein; conjugation TrbI family protein complement(3747460..3748731) Acidovorax ebreus TPSY 7382031 YP_002554923.1 CDS Dtpsy_3498 NC_011992.1 3748734 3749726 R TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: rpi:Rpic_2652 P-type conjugative transfer protein TrbG; P-type conjugative transfer protein TrbG complement(3748734..3749726) Acidovorax ebreus TPSY 7382032 YP_002554924.1 CDS Dtpsy_3499 NC_011992.1 3749723 3750427 R PFAM: Conjugal transfer protein; KEGG: rpi:Rpic_2651 conjugal transfer protein; conjugal transfer protein TrbF complement(3749723..3750427) Acidovorax ebreus TPSY 7382033 YP_002554925.1 CDS Dtpsy_3500 NC_011992.1 3750446 3751798 R type IV secretion VirB6 family; conjugal transfer protein TrbL complement(3750446..3751798) Acidovorax ebreus TPSY 7382034 YP_002554926.1 CDS Dtpsy_3501 NC_011992.1 3751795 3752103 R KEGG: dac:Daci_2694 putative lipoprotein; putative lipoprotein complement(3751795..3752103) Acidovorax ebreus TPSY 7382035 YP_002554927.1 CDS Dtpsy_3502 NC_011992.1 3752115 3752870 R TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: dac:Daci_2695 P-type conjugative transfer protein TrbJ; conjugal transfer protein TrbJ complement(3752115..3752870) Acidovorax ebreus TPSY 7382036 YP_002554928.1 CDS Dtpsy_3503 NC_011992.1 3752867 3755338 R type IV secretion system VirB4 family; conjugal transfer ATPase TrbE complement(3752867..3755338) Acidovorax ebreus TPSY 7382037 YP_002554929.1 CDS Dtpsy_3504 NC_011992.1 3755353 3755625 R KEGG: rme:Rmet_1343 putative conjugal transfer TrbD transmembrane protein; putative conjugal transfer TrbD transmembrane protein complement(3755353..3755625) Acidovorax ebreus TPSY 7382038 YP_002554930.1 CDS Dtpsy_3505 NC_011992.1 3755622 3756008 R PFAM: Conjugal transfer protein TrbC; KEGG: dac:Daci_2698 conjugal transfer protein TrbC; Conjugal transfer protein TrbC complement(3755622..3756008) Acidovorax ebreus TPSY 7382039 YP_002554931.1 CDS Dtpsy_3506 NC_011992.1 3756005 3757039 R TIGRFAM: P-type conjugative transfer ATPase TrbB; PFAM: type II secretion system protein E; KEGG: dac:Daci_2699 P-type conjugative transfer ATPase TrbB; P-type conjugative transfer ATPase TrbB complement(3756005..3757039) Acidovorax ebreus TPSY 7382040 YP_002554932.1 CDS Dtpsy_3507 NC_011992.1 3757036 3757500 R PFAM: CopG domain protein DNA-binding domain protein; KEGG: dac:Daci_2700 CopG/DNA-binding domain-containing protein; CopG domain protein DNA-binding domain protein complement(3757036..3757500) Acidovorax ebreus TPSY 7382041 YP_002554933.1 CDS Dtpsy_3508 NC_011992.1 3757497 3759500 R type IV secretion VirD4 coupling protein family; conjugal transfer coupling protein TraG complement(3757497..3759500) Acidovorax ebreus TPSY 7383421 YP_002554934.1 CDS Dtpsy_3509 NC_011992.1 3759716 3759943 R KEGG: dac:Daci_0441 hypothetical protein; hypothetical protein complement(3759716..3759943) Acidovorax ebreus TPSY 7384635 YP_002554935.1 CDS Dtpsy_3510 NC_011992.1 3759969 3760883 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: dac:Daci_2703 LysR family transcriptional regulator; transcriptional regulator, LysR family complement(3759969..3760883) Acidovorax ebreus TPSY 7384636 YP_002554936.1 CDS Dtpsy_3511 NC_011992.1 3761127 3761756 R PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; response regulator receiver; KEGG: bbr:BB1102 two component response regulator; two component transcriptional regulator, LuxR family complement(3761127..3761756) Acidovorax ebreus TPSY 7384637 YP_002554937.1 CDS Dtpsy_3512 NC_011992.1 3761753 3762826 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bbr:BB1101 two component sensor kinase; histidine kinase complement(3761753..3762826) Acidovorax ebreus TPSY 7384638 YP_002554938.1 CDS Dtpsy_3513 NC_011992.1 3762831 3763076 R PFAM: protein of unknown function DUF156; KEGG: nha:Nham_1887 hypothetical protein; protein of unknown function DUF156 complement(3762831..3763076) Acidovorax ebreus TPSY 7384639 YP_002554939.1 CDS Dtpsy_3514 NC_011992.1 3763140 3763868 R PFAM: MgtC/SapB transporter; KEGG: dac:Daci_1228 MgtC/SapB transporter; MgtC/SapB transporter complement(3763140..3763868) Acidovorax ebreus TPSY 7384640 YP_002554940.1 CDS Dtpsy_3515 NC_011992.1 3763892 3766684 R P-type ATPase involved in magnesium influx; magnesium-transporting ATPase MgtA complement(3763892..3766684) Acidovorax ebreus TPSY 7384641 YP_002554941.1 CDS Dtpsy_3516 NC_011992.1 3766681 3768189 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rso:RS02376 putative outer membrane channel lipoprotein transmembrane; RND efflux system, outer membrane lipoprotein, NodT family complement(3766681..3768189) Acidovorax ebreus TPSY 7384642 YP_002554942.1 CDS Dtpsy_3517 NC_011992.1 3768186 3771314 R TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: xcv:XCV2107 RND superfamily protein; heavy metal efflux pump, CzcA family complement(3768186..3771314) Acidovorax ebreus TPSY 7384643 YP_002554943.1 CDS Dtpsy_3518 NC_011992.1 3771307 3772437 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dac:Daci_1549 RND family efflux transporter MFP subunit; efflux transporter, RND family, MFP subunit complement(3771307..3772437) Acidovorax ebreus TPSY 7384644 YP_002554944.1 CDS Dtpsy_3519 NC_011992.1 3772578 3772898 R KEGG: aav:Aave_0650 hypothetical protein; hypothetical protein complement(3772578..3772898) Acidovorax ebreus TPSY 7384645 YP_002554945.1 CDS Dtpsy_3520 NC_011992.1 3773366 3775333 R KEGG: dac:Daci_0453 hypothetical protein; hypothetical protein complement(3773366..3775333) Acidovorax ebreus TPSY 7384646 YP_002554946.1 CDS Dtpsy_3521 NC_011992.1 3775782 3776369 R KEGG: rme:Rmet_3020 TraF peptidase. Serine peptidase. MEROPS family S26C; TraF peptidase. Serine peptidase. MEROPS family S26C complement(3775782..3776369) Acidovorax ebreus TPSY 7384647 YP_002554947.1 CDS Dtpsy_3522 NC_011992.1 3776366 3776899 R KEGG: rme:Rmet_1257 hypothetical protein; hypothetical protein complement(3776366..3776899) Acidovorax ebreus TPSY 7384648 YP_002554948.1 CDS Dtpsy_3523 NC_011992.1 3776896 3777168 R KEGG: rme:Rmet_1256 hypothetical protein; hypothetical protein complement(3776896..3777168) Acidovorax ebreus TPSY 7384649 YP_002554949.1 CDS Dtpsy_3524 NC_011992.1 3777165 3777803 R PFAM: Cobyrinic acid ac-diamide synthase; KEGG: rme:Rmet_1255 cobyrinic acid a,c-diamide synthase; Cobyrinic acid ac-diamide synthase complement(3777165..3777803) Acidovorax ebreus TPSY 7384650 YP_002554950.1 CDS Dtpsy_3526 NC_011992.1 3778057 3778914 R KEGG: dac:Daci_0458 putative replication initiator and transcription repressor protein; putative replication initiator and transcription repressor protein complement(3778057..3778914) Acidovorax ebreus TPSY 7384652 YP_002554951.1 CDS Dtpsy_3527 NC_011992.1 3778941 3779222 R KEGG: rpi:Rpic_2619 hypothetical protein; hypothetical protein complement(3778941..3779222) Acidovorax ebreus TPSY 7384653 YP_002554952.1 CDS Dtpsy_3528 NC_011992.1 3779306 3780067 R KEGG: ajs:Ajs_2651 hypothetical protein; hypothetical protein complement(3779306..3780067) Acidovorax ebreus TPSY 7384654 YP_002554953.1 CDS Dtpsy_3529 NC_011992.1 3780398 3780748 R KEGG: rpi:Rpic_2617 putative lipoprotein; putative lipoprotein complement(3780398..3780748) Acidovorax ebreus TPSY 7384655 YP_002554954.1 CDS Dtpsy_3530 NC_011992.1 3781007 3781300 D PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: pau:PA14_31160 hypothetical protein; transcriptional regulator, XRE family 3781007..3781300 Acidovorax ebreus TPSY 7384656 YP_002554955.1 CDS Dtpsy_3531 NC_011992.1 3781660 3781974 R PFAM: protein of unknown function DUF736; KEGG: rme:Rmet_3029 protein of unknown function DUF736; protein of unknown function DUF736 complement(3781660..3781974) Acidovorax ebreus TPSY 7384657 YP_002554956.1 CDS Dtpsy_3533 NC_011992.1 3783077 3783286 R KEGG: dac:Daci_2732 hypothetical protein; hypothetical protein complement(3783077..3783286) Acidovorax ebreus TPSY 7384659 YP_002554957.1 CDS Dtpsy_3534 NC_011992.1 3783349 3785412 R PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; KEGG: bpt:Bpet2176 ParB-like nuclease; ParB domain protein nuclease complement(3783349..3785412) Acidovorax ebreus TPSY 7384660 YP_002554958.1 CDS Dtpsy_3535 NC_011992.1 3785493 3786323 R PFAM: protein of unknown function DUF932; KEGG: pap:PSPA7_3741 protein YafZ; protein of unknown function DUF932 complement(3785493..3786323) Acidovorax ebreus TPSY 7384661 YP_002554959.1 CDS Dtpsy_3536 NC_011992.1 3787063 3787413 R KEGG: rme:Rmet_1475 hypothetical protein; hypothetical protein complement(3787063..3787413) Acidovorax ebreus TPSY 7384662 YP_002554960.1 CDS Dtpsy_3537 NC_011992.1 3787713 3788105 R KEGG: rme:Rmet_1243 hypothetical protein; hypothetical protein complement(3787713..3788105) Acidovorax ebreus TPSY 7384663 YP_002554961.1 CDS Dtpsy_3538 NC_011992.1 3788381 3788890 R TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; KEGG: rso:RSc2620 hypothetical protein; DNA repair protein RadC complement(3788381..3788890) Acidovorax ebreus TPSY 7384664 YP_002554962.1 CDS Dtpsy_3539 NC_011992.1 3789216 3790385 R PFAM: protein of unknown function DUF1016; KEGG: zmo:ZMO1931 hypothetical protein; protein of unknown function DUF1016 complement(3789216..3790385) Acidovorax ebreus TPSY 7384665 YP_002554963.1 CDS Dtpsy_3540 NC_011992.1 3790382 3791581 R PFAM: integrase family protein; KEGG: rpi:Rpic_2601 integrase family protein; integrase family protein complement(3790382..3791581) Acidovorax ebreus TPSY 7384666 YP_002554964.1 CDS Dtpsy_3541 NC_011992.1 3791916 3793502 R PFAM: extracellular solute-binding protein family 5; KEGG: ajs:Ajs_4139 extracellular solute-binding protein; extracellular solute-binding protein family 5 complement(3791916..3793502) Acidovorax ebreus TPSY 7384667 YP_002554965.1 CDS Dtpsy_3542 NC_011992.1 3793633 3795342 R TIGRFAM: YidC translocase/secretase; PFAM: 60 kDa inner membrane insertion protein; KEGG: ajs:Ajs_4140 protein translocase subunit YidC; YidC translocase/secretase complement(3793633..3795342) Acidovorax ebreus TPSY 7384668 YP_002554966.1 CDS Dtpsy_3543 NC_011992.1 3795339 3795635 R PFAM: protein of unknown function DUF37; KEGG: ajs:Ajs_4141 hypothetical protein; hypothetical protein complement(3795339..3795635) Acidovorax ebreus TPSY 7384669 YP_002554967.1 CDS Dtpsy_3544 NC_011992.1 3795632 3796105 R KEGG: ajs:Ajs_4142 hypothetical protein; hypothetical protein complement(3795632..3796105) Acidovorax ebreus TPSY 7384670 YP_002554968.1 CDS rpmH NC_011992.1 3796176 3796310 R in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 complement(3796176..3796310) Acidovorax ebreus TPSY 7384671 Dtpsy_R0001 tRNA Dtpsy_R0001 NC_011992.1 331635 331710 D tRNA-Arg 331635..331710 Acidovorax ebreus TPSY 7383904 Dtpsy_R0002 tRNA Dtpsy_R0002 NC_011992.1 404983 405059 D tRNA-Met 404983..405059 Acidovorax ebreus TPSY 7385408 Dtpsy_R0003 tRNA Dtpsy_R0003 NC_011992.1 784801 784876 D tRNA-Thr 784801..784876 Acidovorax ebreus TPSY 7383695 Dtpsy_R0004 tRNA Dtpsy_R0004 NC_011992.1 797748 797824 R tRNA-Pro complement(797748..797824) Acidovorax ebreus TPSY 7383708 Dtpsy_R0005 tRNA Dtpsy_R0005 NC_011992.1 855782 855858 R tRNA-Gln complement(855782..855858) Acidovorax ebreus TPSY 7383519 Dtpsy_R0006 tRNA Dtpsy_R0006 NC_011992.1 876017 876093 D tRNA-Met 876017..876093 Acidovorax ebreus TPSY 7383543 Dtpsy_R0007 tRNA Dtpsy_R0007 NC_011992.1 890624 890700 R tRNA-Arg complement(890624..890700) Acidovorax ebreus TPSY 7383562 Dtpsy_R0008 tRNA Dtpsy_R0008 NC_011992.1 896434 896518 D tRNA-Leu 896434..896518 Acidovorax ebreus TPSY 7383569 Dtpsy_R0010 tRNA Dtpsy_R0010 NC_011992.1 1063433 1063520 R tRNA-Ser complement(1063433..1063520) Acidovorax ebreus TPSY 7382342 Dtpsy_R0012 tRNA Dtpsy_R0012 NC_011992.1 1152869 1152945 D tRNA-Ile 1152869..1152945 Acidovorax ebreus TPSY 7382913 Dtpsy_R0013 tRNA Dtpsy_R0013 NC_011992.1 1152980 1153055 D tRNA-Ala 1152980..1153055 Acidovorax ebreus TPSY 7382914 Dtpsy_R0017 tRNA Dtpsy_R0017 NC_011992.1 1183588 1183674 D tRNA-Leu 1183588..1183674 Acidovorax ebreus TPSY 7384555 Dtpsy_R0018 tRNA Dtpsy_R0018 NC_011992.1 1189815 1189890 D tRNA-Gly 1189815..1189890 Acidovorax ebreus TPSY 7384560 Dtpsy_R0019 tRNA Dtpsy_R0019 NC_011992.1 1189944 1190017 D tRNA-Cys 1189944..1190017 Acidovorax ebreus TPSY 7384561 Dtpsy_R0020 tRNA Dtpsy_R0020 NC_011992.1 1190132 1190207 D tRNA-Gly 1190132..1190207 Acidovorax ebreus TPSY 7384562 Dtpsy_R0021 tRNA Dtpsy_R0021 NC_011992.1 1242102 1242193 D tRNA-Leu 1242102..1242193 Acidovorax ebreus TPSY 7384616 Dtpsy_R0022 tRNA Dtpsy_R0022 NC_011992.1 1246208 1246283 D tRNA-Val 1246208..1246283 Acidovorax ebreus TPSY 7384621 Dtpsy_R0023 tRNA Dtpsy_R0023 NC_011992.1 1248315 1248390 D tRNA-His 1248315..1248390 Acidovorax ebreus TPSY 7384623 Dtpsy_R0024 tRNA Dtpsy_R0024 NC_011992.1 1257359 1257435 R tRNA-Arg complement(1257359..1257435) Acidovorax ebreus TPSY 7384633 Dtpsy_R0025 tRNA Dtpsy_R0025 NC_011992.1 1301420 1301504 R tRNA-Leu complement(1301420..1301504) Acidovorax ebreus TPSY 7383142 Dtpsy_R0026 tRNA Dtpsy_R0026 NC_011992.1 1301685 1301769 R tRNA-Leu complement(1301685..1301769) Acidovorax ebreus TPSY 7383143 Dtpsy_R0028 tRNA Dtpsy_R0028 NC_011992.1 1523411 1523487 D tRNA-Pro 1523411..1523487 Acidovorax ebreus TPSY 7385097 Dtpsy_R0030 tRNA Dtpsy_R0030 NC_011992.1 1664704 1664779 R tRNA-Asn complement(1664704..1664779) Acidovorax ebreus TPSY 7382505 Dtpsy_R0031 tRNA Dtpsy_R0031 NC_011992.1 1664832 1664907 R tRNA-Asn complement(1664832..1664907) Acidovorax ebreus TPSY 7382506 Dtpsy_R0032 tRNA Dtpsy_R0032 NC_011992.1 1735973 1736047 D tRNA-Val 1735973..1736047 Acidovorax ebreus TPSY 7384717 Dtpsy_R0033 tRNA Dtpsy_R0033 NC_011992.1 1736087 1736161 D tRNA-Val 1736087..1736161 Acidovorax ebreus TPSY 7384718 Dtpsy_R0034 tRNA Dtpsy_R0034 NC_011992.1 1892838 1892911 R tRNA-Gly complement(1892838..1892911) Acidovorax ebreus TPSY 7382544 Dtpsy_R0035 tRNA Dtpsy_R0035 NC_011992.1 2055220 2055309 R tRNA-Ser complement(2055220..2055309) Acidovorax ebreus TPSY 7382282 Dtpsy_R0036 tRNA Dtpsy_R0036 NC_011992.1 2114901 2114976 R tRNA-Lys complement(2114901..2114976) Acidovorax ebreus TPSY 7382097 Dtpsy_R0037 tRNA Dtpsy_R0037 NC_011992.1 2174784 2174860 R tRNA-Pro complement(2174784..2174860) Acidovorax ebreus TPSY 7385026 Dtpsy_R0038 tRNA Dtpsy_R0038 NC_011992.1 2240772 2240864 R tRNA-Ser complement(2240772..2240864) Acidovorax ebreus TPSY 7383020 Dtpsy_R0039 tRNA Dtpsy_R0039 NC_011992.1 2365547 2365623 R tRNA-Asp complement(2365547..2365623) Acidovorax ebreus TPSY 7384529 Dtpsy_R0040 tRNA Dtpsy_R0040 NC_011992.1 2365681 2365756 R tRNA-Glu complement(2365681..2365756) Acidovorax ebreus TPSY 7384530 Dtpsy_R0041 tRNA Dtpsy_R0041 NC_011992.1 2365788 2365863 R tRNA-Ala complement(2365788..2365863) Acidovorax ebreus TPSY 7384531 Dtpsy_R0042 tRNA Dtpsy_R0042 NC_011992.1 2365868 2365944 R tRNA-Asp complement(2365868..2365944) Acidovorax ebreus TPSY 7384532 Dtpsy_R0043 tRNA Dtpsy_R0043 NC_011992.1 2365991 2366066 R tRNA-Glu complement(2365991..2366066) Acidovorax ebreus TPSY 7384533 Dtpsy_R0044 tRNA Dtpsy_R0044 NC_011992.1 2366099 2366174 R tRNA-Ala complement(2366099..2366174) Acidovorax ebreus TPSY 7384534 Dtpsy_R0045 tRNA Dtpsy_R0045 NC_011992.1 2394493 2394568 D tRNA-Thr 2394493..2394568 Acidovorax ebreus TPSY 7384843 Dtpsy_R0046 tRNA Dtpsy_R0046 NC_011992.1 2541246 2541330 D tRNA-Leu 2541246..2541330 Acidovorax ebreus TPSY 7383247 Dtpsy_R0047 tRNA Dtpsy_R0047 NC_011992.1 2655529 2655605 R tRNA-Val complement(2655529..2655605) Acidovorax ebreus TPSY 7384766 Dtpsy_R0048 tRNA Dtpsy_R0048 NC_011992.1 2854648 2854723 D tRNA-Lys 2854648..2854723 Acidovorax ebreus TPSY 7382158 Dtpsy_R0049 tRNA Dtpsy_R0049 NC_011992.1 2950950 2951039 R tRNA-Ser complement(2950950..2951039) Acidovorax ebreus TPSY 7385539 Dtpsy_R0050 tRNA Dtpsy_R0050 NC_011992.1 3066289 3066363 D tRNA-Arg 3066289..3066363 Acidovorax ebreus TPSY 7384996 Dtpsy_R0051 tRNA Dtpsy_R0051 NC_011992.1 3118848 3118924 D tRNA-Met 3118848..3118924 Acidovorax ebreus TPSY 7384119 Dtpsy_R0056 tRNA Dtpsy_R0056 NC_011992.1 3268871 3268946 R tRNA-Ala complement(3268871..3268946) Acidovorax ebreus TPSY 7383279 Dtpsy_R0057 tRNA Dtpsy_R0057 NC_011992.1 3268981 3269057 R tRNA-Ile complement(3268981..3269057) Acidovorax ebreus TPSY 7383280 Dtpsy_R0059 tRNA Dtpsy_R0059 NC_011992.1 3453532 3453607 R tRNA-Phe complement(3453532..3453607) Acidovorax ebreus TPSY 7383788 Dtpsy_R0060 tRNA Dtpsy_R0060 NC_011992.1 3471634 3471709 R tRNA-Trp complement(3471634..3471709) Acidovorax ebreus TPSY 7383802 Dtpsy_R0061 tRNA Dtpsy_R0061 NC_011992.1 3472991 3473065 R tRNA-Thr complement(3472991..3473065) Acidovorax ebreus TPSY 7383804 Dtpsy_R0062 tRNA Dtpsy_R0062 NC_011992.1 3473107 3473180 R tRNA-Gly complement(3473107..3473180) Acidovorax ebreus TPSY 7383805 Dtpsy_R0063 tRNA Dtpsy_R0063 NC_011992.1 3473229 3473314 R tRNA-Tyr complement(3473229..3473314) Acidovorax ebreus TPSY 7383806 Dtpsy_R0067 tRNA Dtpsy_R0067 NC_011992.1 3478391 3478466 R tRNA-Ala complement(3478391..3478466) Acidovorax ebreus TPSY 7383812 Dtpsy_R0068 tRNA Dtpsy_R0068 NC_011992.1 3478501 3478577 R tRNA-Ile complement(3478501..3478577) Acidovorax ebreus TPSY 7383813 Dtpsy_R0011 rRNA Dtpsy_R0011 NC_011992.1 1151266 1152782 D 16S ribosomal RNA 1151266..1152782 Acidovorax ebreus TPSY 7382912 Dtpsy_R0014 rRNA Dtpsy_R0014 NC_011992.1 1153397 1156270 D 23S ribosomal RNA 1153397..1156270 Acidovorax ebreus TPSY 7382915 Dtpsy_R0015 rRNA Dtpsy_R0015 NC_011992.1 1156391 1156503 D 5S ribosomal RNA 1156391..1156503 Acidovorax ebreus TPSY 7382916 Dtpsy_R0016 rRNA Dtpsy_R0016 NC_011992.1 1156393 1156504 D 5S ribosomal RNA 1156393..1156504 Acidovorax ebreus TPSY 7382917 Dtpsy_R0053 rRNA Dtpsy_R0053 NC_011992.1 3265422 3265533 R 5S ribosomal RNA complement(3265422..3265533) Acidovorax ebreus TPSY 7383276 Dtpsy_R0054 rRNA Dtpsy_R0054 NC_011992.1 3265423 3265535 R 5S ribosomal RNA complement(3265423..3265535) Acidovorax ebreus TPSY 7383277 Dtpsy_R0055 rRNA Dtpsy_R0055 NC_011992.1 3265656 3268529 R 23S ribosomal RNA complement(3265656..3268529) Acidovorax ebreus TPSY 7383278 Dtpsy_R0058 rRNA Dtpsy_R0058 NC_011992.1 3269144 3270660 R 16S ribosomal RNA complement(3269144..3270660) Acidovorax ebreus TPSY 7383281 Dtpsy_R0064 rRNA Dtpsy_R0064 NC_011992.1 3474942 3475053 R 5S ribosomal RNA complement(3474942..3475053) Acidovorax ebreus TPSY 7383809 Dtpsy_R0065 rRNA Dtpsy_R0065 NC_011992.1 3474943 3475055 R 5S ribosomal RNA complement(3474943..3475055) Acidovorax ebreus TPSY 7383810 Dtpsy_R0066 rRNA Dtpsy_R0066 NC_011992.1 3475176 3478049 R 23S ribosomal RNA complement(3475176..3478049) Acidovorax ebreus TPSY 7383811 Dtpsy_R0069 rRNA Dtpsy_R0069 NC_011992.1 3478664 3480180 R 16S ribosomal RNA complement(3478664..3480180) Acidovorax ebreus TPSY 7383814