-- dump date 20240506_035952 -- class Genbank::Contig -- table contig_comment -- id comment NZ_AP019630.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to AP019630.1.REFSEQ INFORMATION: The reference sequence is identical to AP019630.1. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to AP019630.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to AP019630.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to AP019630.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp).REFSEQ INFORMATION: The reference sequence is identical to AP019630.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to AP019630.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v.REFSEQ INFORMATION: The reference sequence is identical to AP019630.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18;REFSEQ INFORMATION: The reference sequence is identical to AP019630.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604REFSEQ INFORMATION: The reference sequence is identical to AP019630.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256xREFSEQ INFORMATION: The reference sequence is identical to AP019630.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500REFSEQ INFORMATION: The reference sequence is identical to AP019630.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to AP019630.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to AP019630.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to AP019630.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19REFSEQ INFORMATION: The reference sequence is identical to AP019630.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to AP019630.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to AP019630.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to AP019630.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to AP019630.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to AP019630.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to AP019630.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,560REFSEQ INFORMATION: The reference sequence is identical to AP019630.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,560 CDSs (total) :: 4,443REFSEQ INFORMATION: The reference sequence is identical to AP019630.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,560 CDSs (total) :: 4,443 Genes (coding) :: 4,386REFSEQ INFORMATION: The reference sequence is identical to AP019630.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,560 CDSs (total) :: 4,443 Genes (coding) :: 4,386 CDSs (with protein) :: 4,386REFSEQ INFORMATION: The reference sequence is identical to AP019630.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,560 CDSs (total) :: 4,443 Genes (coding) :: 4,386 CDSs (with protein) :: 4,386 Genes (RNA) :: 117REFSEQ INFORMATION: The reference sequence is identical to AP019630.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,560 CDSs (total) :: 4,443 Genes (coding) :: 4,386 CDSs (with protein) :: 4,386 Genes (RNA) :: 117 rRNAs :: 9, 8, 8 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to AP019630.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,560 CDSs (total) :: 4,443 Genes (coding) :: 4,386 CDSs (with protein) :: 4,386 Genes (RNA) :: 117 rRNAs :: 9, 8, 8 (5S, 16S, 23S) complete rRNAs :: 9, 8, 8 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to AP019630.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,560 CDSs (total) :: 4,443 Genes (coding) :: 4,386 CDSs (with protein) :: 4,386 Genes (RNA) :: 117 rRNAs :: 9, 8, 8 (5S, 16S, 23S) complete rRNAs :: 9, 8, 8 (5S, 16S, 23S) tRNAs :: 83REFSEQ INFORMATION: The reference sequence is identical to AP019630.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,560 CDSs (total) :: 4,443 Genes (coding) :: 4,386 CDSs (with protein) :: 4,386 Genes (RNA) :: 117 rRNAs :: 9, 8, 8 (5S, 16S, 23S) complete rRNAs :: 9, 8, 8 (5S, 16S, 23S) tRNAs :: 83 ncRNAs :: 9REFSEQ INFORMATION: The reference sequence is identical to AP019630.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,560 CDSs (total) :: 4,443 Genes (coding) :: 4,386 CDSs (with protein) :: 4,386 Genes (RNA) :: 117 rRNAs :: 9, 8, 8 (5S, 16S, 23S) complete rRNAs :: 9, 8, 8 (5S, 16S, 23S) tRNAs :: 83 ncRNAs :: 9 Pseudo Genes (total) :: 57REFSEQ INFORMATION: The reference sequence is identical to AP019630.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,560 CDSs (total) :: 4,443 Genes (coding) :: 4,386 CDSs (with protein) :: 4,386 Genes (RNA) :: 117 rRNAs :: 9, 8, 8 (5S, 16S, 23S) complete rRNAs :: 9, 8, 8 (5S, 16S, 23S) tRNAs :: 83 ncRNAs :: 9 Pseudo Genes (total) :: 57 CDSs (without protein) :: 57REFSEQ INFORMATION: The reference sequence is identical to AP019630.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,560 CDSs (total) :: 4,443 Genes (coding) :: 4,386 CDSs (with protein) :: 4,386 Genes (RNA) :: 117 rRNAs :: 9, 8, 8 (5S, 16S, 23S) complete rRNAs :: 9, 8, 8 (5S, 16S, 23S) tRNAs :: 83 ncRNAs :: 9 Pseudo Genes (total) :: 57 CDSs (without protein) :: 57 Pseudo Genes (ambiguous residues) :: 0 of 57REFSEQ INFORMATION: The reference sequence is identical to AP019630.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,560 CDSs (total) :: 4,443 Genes (coding) :: 4,386 CDSs (with protein) :: 4,386 Genes (RNA) :: 117 rRNAs :: 9, 8, 8 (5S, 16S, 23S) complete rRNAs :: 9, 8, 8 (5S, 16S, 23S) tRNAs :: 83 ncRNAs :: 9 Pseudo Genes (total) :: 57 CDSs (without protein) :: 57 Pseudo Genes (ambiguous residues) :: 0 of 57 Pseudo Genes (frameshifted) :: 26 of 57REFSEQ INFORMATION: The reference sequence is identical to AP019630.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,560 CDSs (total) :: 4,443 Genes (coding) :: 4,386 CDSs (with protein) :: 4,386 Genes (RNA) :: 117 rRNAs :: 9, 8, 8 (5S, 16S, 23S) complete rRNAs :: 9, 8, 8 (5S, 16S, 23S) tRNAs :: 83 ncRNAs :: 9 Pseudo Genes (total) :: 57 CDSs (without protein) :: 57 Pseudo Genes (ambiguous residues) :: 0 of 57 Pseudo Genes (frameshifted) :: 26 of 57 Pseudo Genes (incomplete) :: 35 of 57REFSEQ INFORMATION: The reference sequence is identical to AP019630.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,560 CDSs (total) :: 4,443 Genes (coding) :: 4,386 CDSs (with protein) :: 4,386 Genes (RNA) :: 117 rRNAs :: 9, 8, 8 (5S, 16S, 23S) complete rRNAs :: 9, 8, 8 (5S, 16S, 23S) tRNAs :: 83 ncRNAs :: 9 Pseudo Genes (total) :: 57 CDSs (without protein) :: 57 Pseudo Genes (ambiguous residues) :: 0 of 57 Pseudo Genes (frameshifted) :: 26 of 57 Pseudo Genes (incomplete) :: 35 of 57 Pseudo Genes (internal stop) :: 15 of 57REFSEQ INFORMATION: The reference sequence is identical to AP019630.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,560 CDSs (total) :: 4,443 Genes (coding) :: 4,386 CDSs (with protein) :: 4,386 Genes (RNA) :: 117 rRNAs :: 9, 8, 8 (5S, 16S, 23S) complete rRNAs :: 9, 8, 8 (5S, 16S, 23S) tRNAs :: 83 ncRNAs :: 9 Pseudo Genes (total) :: 57 CDSs (without protein) :: 57 Pseudo Genes (ambiguous residues) :: 0 of 57 Pseudo Genes (frameshifted) :: 26 of 57 Pseudo Genes (incomplete) :: 35 of 57 Pseudo Genes (internal stop) :: 15 of 57 Pseudo Genes (multiple problems) :: 17 of 57REFSEQ INFORMATION: The reference sequence is identical to AP019630.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,560 CDSs (total) :: 4,443 Genes (coding) :: 4,386 CDSs (with protein) :: 4,386 Genes (RNA) :: 117 rRNAs :: 9, 8, 8 (5S, 16S, 23S) complete rRNAs :: 9, 8, 8 (5S, 16S, 23S) tRNAs :: 83 ncRNAs :: 9 Pseudo Genes (total) :: 57 CDSs (without protein) :: 57 Pseudo Genes (ambiguous residues) :: 0 of 57 Pseudo Genes (frameshifted) :: 26 of 57 Pseudo Genes (incomplete) :: 35 of 57 Pseudo Genes (internal stop) :: 15 of 57 Pseudo Genes (multiple problems) :: 17 of 57 Pseudo Genes (short protein) :: 1 of 57REFSEQ INFORMATION: The reference sequence is identical to AP019630.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,560 CDSs (total) :: 4,443 Genes (coding) :: 4,386 CDSs (with protein) :: 4,386 Genes (RNA) :: 117 rRNAs :: 9, 8, 8 (5S, 16S, 23S) complete rRNAs :: 9, 8, 8 (5S, 16S, 23S) tRNAs :: 83 ncRNAs :: 9 Pseudo Genes (total) :: 57 CDSs (without protein) :: 57 Pseudo Genes (ambiguous residues) :: 0 of 57 Pseudo Genes (frameshifted) :: 26 of 57 Pseudo Genes (incomplete) :: 35 of 57 Pseudo Genes (internal stop) :: 15 of 57 Pseudo Genes (multiple problems) :: 17 of 57 Pseudo Genes (short protein) :: 1 of 57 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to AP019630.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,560 CDSs (total) :: 4,443 Genes (coding) :: 4,386 CDSs (with protein) :: 4,386 Genes (RNA) :: 117 rRNAs :: 9, 8, 8 (5S, 16S, 23S) complete rRNAs :: 9, 8, 8 (5S, 16S, 23S) tRNAs :: 83 ncRNAs :: 9 Pseudo Genes (total) :: 57 CDSs (without protein) :: 57 Pseudo Genes (ambiguous residues) :: 0 of 57 Pseudo Genes (frameshifted) :: 26 of 57 Pseudo Genes (incomplete) :: 35 of 57 Pseudo Genes (internal stop) :: 15 of 57 Pseudo Genes (multiple problems) :: 17 of 57 Pseudo Genes (short protein) :: 1 of 57 ##Genome-Annotation-Data-END## COMPLETENESS: full length. NZ_AP019631.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to AP019631.1.REFSEQ INFORMATION: The reference sequence is identical to AP019631.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp).REFSEQ INFORMATION: The reference sequence is identical to AP019631.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to AP019631.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to AP019631.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to AP019631.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to AP019631.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v.REFSEQ INFORMATION: The reference sequence is identical to AP019631.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18;REFSEQ INFORMATION: The reference sequence is identical to AP019631.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604REFSEQ INFORMATION: The reference sequence is identical to AP019631.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256xREFSEQ INFORMATION: The reference sequence is identical to AP019631.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500REFSEQ INFORMATION: The reference sequence is identical to AP019631.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to AP019631.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to AP019631.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to AP019631.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19REFSEQ INFORMATION: The reference sequence is identical to AP019631.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to AP019631.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to AP019631.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to AP019631.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to AP019631.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to AP019631.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to AP019631.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,560REFSEQ INFORMATION: The reference sequence is identical to AP019631.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,560 CDSs (total) :: 4,443REFSEQ INFORMATION: The reference sequence is identical to AP019631.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,560 CDSs (total) :: 4,443 Genes (coding) :: 4,386REFSEQ INFORMATION: The reference sequence is identical to AP019631.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,560 CDSs (total) :: 4,443 Genes (coding) :: 4,386 CDSs (with protein) :: 4,386REFSEQ INFORMATION: The reference sequence is identical to AP019631.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,560 CDSs (total) :: 4,443 Genes (coding) :: 4,386 CDSs (with protein) :: 4,386 Genes (RNA) :: 117REFSEQ INFORMATION: The reference sequence is identical to AP019631.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,560 CDSs (total) :: 4,443 Genes (coding) :: 4,386 CDSs (with protein) :: 4,386 Genes (RNA) :: 117 rRNAs :: 9, 8, 8 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to AP019631.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,560 CDSs (total) :: 4,443 Genes (coding) :: 4,386 CDSs (with protein) :: 4,386 Genes (RNA) :: 117 rRNAs :: 9, 8, 8 (5S, 16S, 23S) complete rRNAs :: 9, 8, 8 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to AP019631.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,560 CDSs (total) :: 4,443 Genes (coding) :: 4,386 CDSs (with protein) :: 4,386 Genes (RNA) :: 117 rRNAs :: 9, 8, 8 (5S, 16S, 23S) complete rRNAs :: 9, 8, 8 (5S, 16S, 23S) tRNAs :: 83REFSEQ INFORMATION: The reference sequence is identical to AP019631.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,560 CDSs (total) :: 4,443 Genes (coding) :: 4,386 CDSs (with protein) :: 4,386 Genes (RNA) :: 117 rRNAs :: 9, 8, 8 (5S, 16S, 23S) complete rRNAs :: 9, 8, 8 (5S, 16S, 23S) tRNAs :: 83 ncRNAs :: 9REFSEQ INFORMATION: The reference sequence is identical to AP019631.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,560 CDSs (total) :: 4,443 Genes (coding) :: 4,386 CDSs (with protein) :: 4,386 Genes (RNA) :: 117 rRNAs :: 9, 8, 8 (5S, 16S, 23S) complete rRNAs :: 9, 8, 8 (5S, 16S, 23S) tRNAs :: 83 ncRNAs :: 9 Pseudo Genes (total) :: 57REFSEQ INFORMATION: The reference sequence is identical to AP019631.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,560 CDSs (total) :: 4,443 Genes (coding) :: 4,386 CDSs (with protein) :: 4,386 Genes (RNA) :: 117 rRNAs :: 9, 8, 8 (5S, 16S, 23S) complete rRNAs :: 9, 8, 8 (5S, 16S, 23S) tRNAs :: 83 ncRNAs :: 9 Pseudo Genes (total) :: 57 CDSs (without protein) :: 57REFSEQ INFORMATION: The reference sequence is identical to AP019631.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,560 CDSs (total) :: 4,443 Genes (coding) :: 4,386 CDSs (with protein) :: 4,386 Genes (RNA) :: 117 rRNAs :: 9, 8, 8 (5S, 16S, 23S) complete rRNAs :: 9, 8, 8 (5S, 16S, 23S) tRNAs :: 83 ncRNAs :: 9 Pseudo Genes (total) :: 57 CDSs (without protein) :: 57 Pseudo Genes (ambiguous residues) :: 0 of 57REFSEQ INFORMATION: The reference sequence is identical to AP019631.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,560 CDSs (total) :: 4,443 Genes (coding) :: 4,386 CDSs (with protein) :: 4,386 Genes (RNA) :: 117 rRNAs :: 9, 8, 8 (5S, 16S, 23S) complete rRNAs :: 9, 8, 8 (5S, 16S, 23S) tRNAs :: 83 ncRNAs :: 9 Pseudo Genes (total) :: 57 CDSs (without protein) :: 57 Pseudo Genes (ambiguous residues) :: 0 of 57 Pseudo Genes (frameshifted) :: 26 of 57REFSEQ INFORMATION: The reference sequence is identical to AP019631.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,560 CDSs (total) :: 4,443 Genes (coding) :: 4,386 CDSs (with protein) :: 4,386 Genes (RNA) :: 117 rRNAs :: 9, 8, 8 (5S, 16S, 23S) complete rRNAs :: 9, 8, 8 (5S, 16S, 23S) tRNAs :: 83 ncRNAs :: 9 Pseudo Genes (total) :: 57 CDSs (without protein) :: 57 Pseudo Genes (ambiguous residues) :: 0 of 57 Pseudo Genes (frameshifted) :: 26 of 57 Pseudo Genes (incomplete) :: 35 of 57REFSEQ INFORMATION: The reference sequence is identical to AP019631.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,560 CDSs (total) :: 4,443 Genes (coding) :: 4,386 CDSs (with protein) :: 4,386 Genes (RNA) :: 117 rRNAs :: 9, 8, 8 (5S, 16S, 23S) complete rRNAs :: 9, 8, 8 (5S, 16S, 23S) tRNAs :: 83 ncRNAs :: 9 Pseudo Genes (total) :: 57 CDSs (without protein) :: 57 Pseudo Genes (ambiguous residues) :: 0 of 57 Pseudo Genes (frameshifted) :: 26 of 57 Pseudo Genes (incomplete) :: 35 of 57 Pseudo Genes (internal stop) :: 15 of 57REFSEQ INFORMATION: The reference sequence is identical to AP019631.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,560 CDSs (total) :: 4,443 Genes (coding) :: 4,386 CDSs (with protein) :: 4,386 Genes (RNA) :: 117 rRNAs :: 9, 8, 8 (5S, 16S, 23S) complete rRNAs :: 9, 8, 8 (5S, 16S, 23S) tRNAs :: 83 ncRNAs :: 9 Pseudo Genes (total) :: 57 CDSs (without protein) :: 57 Pseudo Genes (ambiguous residues) :: 0 of 57 Pseudo Genes (frameshifted) :: 26 of 57 Pseudo Genes (incomplete) :: 35 of 57 Pseudo Genes (internal stop) :: 15 of 57 Pseudo Genes (multiple problems) :: 17 of 57REFSEQ INFORMATION: The reference sequence is identical to AP019631.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,560 CDSs (total) :: 4,443 Genes (coding) :: 4,386 CDSs (with protein) :: 4,386 Genes (RNA) :: 117 rRNAs :: 9, 8, 8 (5S, 16S, 23S) complete rRNAs :: 9, 8, 8 (5S, 16S, 23S) tRNAs :: 83 ncRNAs :: 9 Pseudo Genes (total) :: 57 CDSs (without protein) :: 57 Pseudo Genes (ambiguous residues) :: 0 of 57 Pseudo Genes (frameshifted) :: 26 of 57 Pseudo Genes (incomplete) :: 35 of 57 Pseudo Genes (internal stop) :: 15 of 57 Pseudo Genes (multiple problems) :: 17 of 57 Pseudo Genes (short protein) :: 1 of 57REFSEQ INFORMATION: The reference sequence is identical to AP019631.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,560 CDSs (total) :: 4,443 Genes (coding) :: 4,386 CDSs (with protein) :: 4,386 Genes (RNA) :: 117 rRNAs :: 9, 8, 8 (5S, 16S, 23S) complete rRNAs :: 9, 8, 8 (5S, 16S, 23S) tRNAs :: 83 ncRNAs :: 9 Pseudo Genes (total) :: 57 CDSs (without protein) :: 57 Pseudo Genes (ambiguous residues) :: 0 of 57 Pseudo Genes (frameshifted) :: 26 of 57 Pseudo Genes (incomplete) :: 35 of 57 Pseudo Genes (internal stop) :: 15 of 57 Pseudo Genes (multiple problems) :: 17 of 57 Pseudo Genes (short protein) :: 1 of 57 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to AP019631.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 256x Sequencing Technology :: Sequel; NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:20:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,560 CDSs (total) :: 4,443 Genes (coding) :: 4,386 CDSs (with protein) :: 4,386 Genes (RNA) :: 117 rRNAs :: 9, 8, 8 (5S, 16S, 23S) complete rRNAs :: 9, 8, 8 (5S, 16S, 23S) tRNAs :: 83 ncRNAs :: 9 Pseudo Genes (total) :: 57 CDSs (without protein) :: 57 Pseudo Genes (ambiguous residues) :: 0 of 57 Pseudo Genes (frameshifted) :: 26 of 57 Pseudo Genes (incomplete) :: 35 of 57 Pseudo Genes (internal stop) :: 15 of 57 Pseudo Genes (multiple problems) :: 17 of 57 Pseudo Genes (short protein) :: 1 of 57 ##Genome-Annotation-Data-END## COMPLETENESS: full length.