-- dump date   	20140619_082146
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_006113608.1	This CDS may be transcribed separately or form part of a pseudogene with the downstream CDS
YP_006113663.1	3-isopropylmalate isomerase subunit
YP_006113724.1	putative fimbrial protein
YP_006113727.1	putative fimbrial protein
YP_006113728.1	outer membrane usher protein
YP_006113729.1	periplasmic pilin chaperone
YP_006113730.1	fimbrial-like adhesin protein
YP_006113731.1	2-amino-4-hydroxy-6-hydroxymethyldihyropteridin e pyrophosphokinase
YP_006113811.1	putative cation efflux system protein
YP_006113817.1	Similar to N-terminus to codon 272 of Escherichia coli pcoA copper resistance protein A precursor. UniProt:Q47452 (605 aa) fasta scores: E()=1.9e-106, 100.000% id in 270 aa, and to N-terminus to codon 272 of Escherichia coli B. copper-resistance protein, copA family precursor. copper-resistance protein, copa family precursor. UniProt:A2UFX0 (EMBL:AAWW01000008 (605 aa) fasta scores: E()=1.9e-106, 100.000% id in 270 aa. This CDS may be transcribed separately or may form part of a pseudogene with the downstream CDS
YP_006113818.1	Similar to C-terminus from codon 280 of Escherichia coli pcoa copper resistance protein a precursor. UniProt:Q47452 (605 aa) fasta scores: E()=2.8e-125, 100.000% id in 327 aa. This CDS may be transcribed separately or may form part of a pseudogene with the upstream CDS
YP_006113882.1	putative phage capsid protein
YP_006113898.1	Similar to C-terminus of Escherichia coli. StfE UniProt:P33227 (EMBL:X01805 (166 aa) fasta scores: E()=5.7e-28, 58.791% id in 182 aa, and to C-terminus of bacteriophage sfv (shigella flexneri bacteriophage v). orf21 UniProt:O22004 (EMBL:U82619 (216 aa) fasta scores: E()=2.5e-34, 92.593% id in 108 aa, and to entire protein of Shigella flexneri. hypothetical bacteriophage protein. UniProt:Q83M73 (EMBL:AE005674 (216 aa) fasta scores: E()=4.6e-34, 92.593% id in 108 aa
YP_006113903.1	no significant database hits
YP_006113917.1	no significant database hits
YP_006113966.1	Similar to Escherichia coli (strain K12). YahG UniProt:P77221 (EMBL:U73857 (472 aa) fasta scores: E()=6.4e-37, 100.000% id in 106 aa. The CDS may be transcribed separately or may form part of a pseudogene with the downstream CDS
YP_006113967.1	Similar to C-terminus of Escherichia coli (strain k12). yahg UniProt:P77221 (EMBL:U73857 (472 aa) fasta scores: E()=2.5e-135, 99.725% id in 363 aa. The CDS may be transcribed separately or may form part of a pseudogene with the upstream CDS
YP_006114146.1	tRNA 2-selenouridine synthase, selenophosphate-dependent
YP_006114184.1	Similar to N-terminus of Escherichia coli B. yd repeat protein. UniProt:A2UJ45 (EMBL:AAWW01000021 (1505 aa) fasta scores: E()=0, 98.800% id in 1417 aa
YP_006114300.1	two-component response regulator
YP_006114388.1	Similar to Bacteriophage lambda O replication protein O. UniProt:P03688 (333 aa) fasta scores: E()=1.9e-45, 91.111% id in 135 aa, and to bacteriophage lambda. O UniProt:A2SY76 (EMBL:DQ372056 (157 aa) fasta scores: E()=9.9e-46, 91.111% id in 135 aa. This CDS may be truncated at the C-terminus and may be transcribed separately or form part of a pseudogene with the downstream CDS
YP_006114389.1	Similar to C-terminus of stx2 converting phage i. o UniProt:Q776H0 (EMBL:AP004402 (312 aa) fasta scores: E()=9.4e-56, 100.000% id in 124 aa. This CDS may be transcribed separately or may form part of a pseudogene with the upstream CDS
YP_006114403.1	putative phage DNA methylase
YP_006114428.1	phage tail fiber assembly protein
YP_006114596.1	outer membrane usher protein
YP_006114601.1	fimbrial-like adhesin protein
YP_006114602.1	fimbrial-like adhesin protein
YP_006114603.1	periplasmic pilin chaperone
YP_006114638.1	phosphoanhydride phosphorylase
YP_006114809.1	Similar, but truncated at the N-terminus, to Escherichia coli o6:k15:h31 (strain 536/upec). major coat protein. UniProt:Q0TIP6 (EMBL:CP000247 (341 aa) fasta scores: E()=1e-108, 99.315% id in 292 aa
YP_006114829.1	spermidine/putrescine ABC transporter permease
YP_006114846.1	Similar to ) escherichia coli. insb. UniProt:Q5I3M5 (EMBL:AY857617 (151 aa) fasta scores: E()=4.9e-44, 99.048% id in 105 aa, and to ) shigella boydii serotype 4 (strain sb227). insb UniProt:Q31YA9 (EMBL:CP000036 (123 aa) fasta scores: E()=4.1e-44, 99.048% id in 105 aa
YP_006114847.1	Similar, but truncated at the N-terminus, to Escherichia coli E24377A putative uncharacterized protein. putative uncharacterized protein. UniProt:A7ZKT3 (82 aa) fasta scores: E()=8e-21, 100.000% id in 60 aa
YP_006115018.1	Similar to C-terminus of Escherichia coli (strain k12). abga UniProt:P77357 (EMBL:U00096 (436 aa) fasta scores: E()=2.8e-122, 100.000% id in 326 aa. This CDS may be transcribed separately or may form part of a pseudogene with the upstream CDS
YP_006115019.1	This CDS may be transcribed separately or may form part of a pseudogene with the downstream CDS
YP_006115052.1	Similar to C-terminus of Salmonella typhi. BigB. UniProt:Q9X687 (EMBL:AF133185 (739 aa) fasta scores: E()=3.4e-164, 72.320% id in 737 aa, and to entire protein of escherichia coli. ydba UniProt:P33666 (EMBL:U00096 (2003 aa) fasta scores: E()=0, 86.517% id in 2314 aa
YP_006115115.1	Similar to Escherichia coli yddj uncharacterized protein yddj. UniProt:P76122 (111 aa) fasta scores: E()=3.2e-41, 99.099% id in 111 aa, and similar, but truncated at the N-terminus, to Escherichia coli b. putative uncharacterized protein. UniProt:A2UD33 (EMBL:AAWW01000001 (443 aa) fasta scores: E()=2.9e-41, 100.000% id in 111 aa
YP_006115116.1	Similar, but truncated at the C-terminus to Escherichia coli B putative uncharacterized protein. UniProt:A2UD33 (443 aa) fasta scores: E()=3e-117, 99.685% id in 317 aa, and similar to entire protein of Escherichia coli yddk uncharacterized protein yddk. uncharacterized protein yddk. UniProt:P76123 (318 aa) fasta scores: E()=9.5e-118, 99.686% id in 318 aa
YP_006115119.1	Note the read-through TGA selenocystiene stop codon
YP_006115133.1	Similar to C-terminus of Escherichia coli B diguanylate cyclase. diguanylate cyclase. UniProt:A2UD54 (460 aa) fasta scores: E()=2.9e-127, 100.000% id in 347 aa
YP_006115164.1	Similar, but exended at the N-terminus, to shigella boydii serotype 4 (strain sb227). putative uncharacterized protein. UniProt:Q320K9 (EMBL:CP000036 (315 aa) fasta scores: E()=3.6e-112, 99.048% id in 315 aa, and similar, but truncated at the N-terminus, to Escherichia coli E24377A diguanylate cyclase (ggdef) domain protein. UniProt:A7ZLX8 (472 aa) fasta scores: E()=3.8e-128, 99.437% id in 355 aa. This CDS may form part of a pseudogene with the upstream CDS, or may be transcribed separately starting at codon 41
YP_006115165.1	Similar to Escherichia coli e24377a. diguanylate cyclase (ggdef) domain protein. UniProt:A7ZLX8 (EMBL:CP000800 (472 aa) fasta scores: E()=1.5e-42, 98.291% id in 117 aa. This CDS may be transcribed separately or may form part of a frameshift pseudogene with the downstream CDS
YP_006115524.1	no significant database hits
YP_006115525.1	no significant database hits
YP_006115527.1	no significant database hits
YP_006115529.1	no significant database hits
YP_006115530.1	no significant database hits
YP_006115554.1	no significant database hits
YP_006115573.1	Similar to Bacteriophage P2 h probable tail fiber protein (gph). UniProt:P26700 (669 aa) fasta scores: E()=4.2e-63, 49.746% id in 788 aa, and C-terminus is similar to Shigella sonnei. bv' UniProt:Q53813 (EMBL:D00660 (318 aa) fasta scores: E()=2.3e-122, 95.597% id in 318 aa
YP_006115577.1	Similar to Escherichia coli B phage p2 gpu family protein. UniProt:A2UF07 (161 aa) fasta scores: E()=3.2e-27, 48.148% id in 162 aa, and to ) escherichia coli o157:h7. putative tail protein. UniProt:Q7AD22 (EMBL:BA000007 (162 aa) fasta scores: E()=7.5e-62, 98.765% id in 162 aa
YP_006115584.1	similar to C-terminus of these CDS
YP_006115585.1	bacteriophage regulatory protein. bacteriophage regulatory protein
YP_006115649.1	yersiniabactin siderophore biosynthetic protein
YP_006115654.1	Similar to codons 745 to 1235 of Escherichia coli. EaeH. UniProt:Q3I510 (EMBL:DQ109813 (1418 aa) fasta scores: E()=1.2e-08, 26.233% id in 507 aa, and to entire protein of Escherichia coli o6:k15:h31 (strain 536/upec). putative uncharacterized protein. UniProt:Q0TGH9 (EMBL:CP000247 (489 aa) fasta scores: E()=3.8e-156, 99.796% id in 489 aa. This CDS may be transcribed separately or may form part of a pseudogene with the downstream CDS
YP_006115655.1	Similar to codons 1321 to 1470 of Escherichia coli O157:H7 putative invasin. UniProt:Q7A8L6 (1579 aa) fasta scores: E()=9.9e-27, 58.278% id in 151 aa, and to entire protein of Escherichia coli (strain uti89/upec). putative uncharacterized protein. UniProt:Q1RAF1 (EMBL:CP000243 (158 aa) fasta scores: E()=2.1e-55, 99.367% id in 158 aa. This CDS may be transcribed separately or as part of a pseudogene with the upstream CDS.
YP_006115672.1	no significant database hits
YP_006115675.1	no significant database hits
YP_006115715.1	exonuclease i. exonuclease i
YP_006115734.1	gluconate-6-phosphate dehydrogenase, decarboxylating
YP_006115746.1	subunit with GalU
YP_006115788.1	xylulose kinase
YP_006115960.1	Similar to N-terminus of Escherichia coli. elad UniProt:Q47013 (EMBL:U58768 (402 aa) fasta scores: E()=6.9e-95, 99.606% id in 254 aa
YP_006116169.1	no significant database hits
YP_006116173.1	Similar to N-terminus of Escherichia coli. eliminase. UniProt:P77039 (EMBL:X96495 (820 aa) fasta scores: E()=1.1e-33, 67.470% id in 166 aa, and to N-terminus of Phage PhiV10. putative tail fiber. UniProt:Q286Z3 (EMBL:DQ126339 (875 aa) fasta scores: E()=2.2e-69, 74.812% id in 266 aa.
YP_006116174.1	no significant database hits
YP_006116176.1	no significant database hits
YP_006116178.1	Similar to codons 138 to 195 of Bacillus weihenstephanensis kbab4. ABC transporter EcsB. UniProt:Q2AUV5 (EMBL:AAOY01000011 (403 aa) fasta scores: E()=3.8, 37.288% id in 59 aa
YP_006116206.1	Similar to Escherichia coli dnaT primosomal protein 1 (primosomal protein i). UniProt:P0A8J2 (179 aa) fasta scores: E()=5.5e-11, 41.284% id in 109 aa, and to ) phage phiv10. putative primosomal protein. UniProt:Q286X4 (EMBL:DQ126339 (275 aa) fasta scores: E()=1.1e-110, 98.545% id in 275 aa
YP_006116212.1	Similar to C-terminus of Escherichia coli. rece UniProt:P15032 (EMBL:U00096 (866 aa) fasta scores: E()=6.6e-51, 48.507% id in 268 aa, and to N-terminus of Phage PhiV10. putative recet. UniProt:Q286Y0 (EMBL:DQ126339 (586 aa) fasta scores: E()=8.1e-110, 97.015% id in 268 aa, and to entire protein of Burkholderia multivorans atcc 17616. exonuclease viii, 5'-> 3' specific dsdna exonuclease. UniProt:A0UIW7 (EMBL:AAVB01000005 (270 aa) fasta scores: E()=1e-22, 33.692% id in 279 aa
YP_006116213.1	Similar to escherichia coli. enterohemolysin 1. UniProt:Q06917 (EMBL:X70047 (267 aa) fasta scores: E()=2.7e-50, 73.684% id in 285 aa, and to C-terminus of phage phiv10. putative recet. UniProt:Q286Y0 (EMBL:DQ126339 (586 aa) fasta scores: E()=3.8e-120, 99.042% id in 313 aa
YP_006116242.1	putative L-cysteine desulfurase
YP_006116276.1	Similar to C-terminus of Escherichia coli PinE DNA-invertase from lambdoid prophage e14. UniProt:P03014 (184 aa) fasta scores: E()=6.8e-22, 87.324% id in 71 aa, and to C-terminus of Escherichia coli o157:h7. DNA-invertase. UniProt:Q7AHF0 (EMBL:BA000007 (184 aa) fasta scores: E()=9.6e-23, 90.141% id in 71 aa. This CDS may be transcribed separately or may form part of a pseudogene with the upstream CDS
YP_006116277.1	Similar to N-terminus of Escherichia coli PinE DNA-invertase from lambdoid prophage e14. UniProt:P03014 (184 aa) fasta scores: E()=1.9e-33, 90.476% id in 105 aa, and similar to N-terminus of Escherichia coli B. resolvase, N-terminal domain. UniProt:A2UF01 (EMBL:AAWW01000005 (188 aa) fasta scores: E()=2.8e-35, 96.190% id in 105 aa. This CDS may be transcribed separately or may form part of a pseudogene with the downstream CDS
YP_006116285.1	Similar to codons 80 to 130 of alpha proteobacterium htcc2255. diguanylate cyclase (ggdef domain). UniProt:Q0F5P4 (EMBL:AATR01000025 (331 aa) fasta scores: E()=4, 41.176% id in 51 aa
YP_006116308.1	putative transmembrane phage holin protein
YP_006116311.1	Codons 160 to 510 is similar to codons 360 to 710 of Staphylococcus aureus. similar to D. nodosus VapE. UniProt:Q8VLX1 (EMBL:U93688 (477 aa) fasta scores: E()=8.6e-19, 30.319% id in 376 aa, and to C-terminus is similar to C-terminus of acyrthosiphon pisum secondary endosymbiont phage 2. p3 UniProt:Q3LZR9 (EMBL:DQ092612 (547 aa) fasta scores: E()=3.9e-113, 72.439% id in 410 aa
YP_006116325.1	Similar to N-terminus of Bacteriophage apse-1. 41 UniProt:Q9T1Q7 (EMBL:AF157835 (460 aa) fasta scores: E()=7.5e-85, 72.340% id in 282 aa
YP_006116326.1	Similar to C-terminus from codon 180 of shigella dysenteriae serotype 1 (strain sd197). hypothetical bacteriophage protein. UniProt:Q32CW4 (EMBL:CP000034 (311 aa) fasta scores: E()=4.9e-54, 99.254% id in 134 aa. This CDS may be transcribed on its own or may form part of a pseudogene with the upstream CDS.
YP_006116328.1	putative ferredoxin
YP_006116380.1	integrase
YP_006116384.1	From codon 40 to 140 similar to N-terminus to codon 105 of Cryptosporidium hominis. putative uncharacterized protein. UniProt:Q5CJI4 (EMBL:AAEL01000125 (119 aa) fasta scores: E()=5.3, 33.333% id in 105 aa
YP_006116390.1	Similar, but truncated at the N-terminus, to Erwinia carotovora subsp. atroseptica (Pectobacterium atrosepticum) putative uncharacterized protein. UniProt:Q6D8B0 (140 aa) fasta scores: E()=2.4e-10, 32.039% id in 103 aa
YP_006116394.1	Similar, truncated at the N-terminus, to Yersinia enterocolitica serotype O:8/biotype 1B (strain 8081). putative integrase/recombinase. UniProt:A1JKG5 (EMBL:AM286415 (452 aa) fasta scores: E()=1.9e-46, 37.783% id in 442 aa, and similar to entire protein of Enterobacter sp. 638. phage integrase family protein. UniProt:A4WCY6 (EMBL:CP000653 (400 aa) fasta scores: E()=3.6e-103, 74.874% id in 398 aa
YP_006116399.1	Similar to codons 40 to 100 of Escherichia coli. PinE UniProt:P03014 (EMBL:K00676 (184 aa) fasta scores: E()=8.1e-11, 69.643% id in 56 aa, and to entire protein of Escherichia coli. PinH UniProt:P76611 (EMBL:U00096 (79 aa) fasta scores: E()=4.3e-35, 100.000% id in 79 aa
YP_006116631.1	RF-2 carries a +1 frameshift at codon 26. This is a regulatory feature of this gene
YP_006116711.1	Similar to N-terminus of Escherichia coli. cdib UniProt:Q3YL97 (EMBL:DQ100454 (588 aa) fasta scores: E()=6e-114, 88.338% id in 343 aa, and to ) escherichia coli. hypothetical protein. UniProt:Q1RPM2 (EMBL:AM236323 (588 aa) fasta scores: E()=3.9e-115, 88.338% id in 343 aa
YP_006116731.1	transposase
YP_006116733.1	Similar, but truncated at the N-terminus, to Escherichia coli ulac ascorbate-specific phosphotransferase enzyme iia component (ec 2.7.1.-) (pts system ascorbate-specific eiia component). UniProt:P69820 (154 aa) fasta scores: E()=2.7e-07, 37.805% id in 82 aa, and similar, but truncated at the N-terminus, to Escherichia coli. orf10 UniProt:Q9AI22 (EMBL:AF286670 (147 aa) fasta scores: E()=2.7e-27, 100.000% id in 82 aa
YP_006116737.1	Similar to N-terminus of Escherichia coli. transposase orfa, isec8. UniProt:Q3ZU26 (EMBL:AY258503 (139 aa) fasta scores: E()=7.6e-17, 57.778% id in 90 aa, and to N-terminus of Escherichia coli. orf7 UniProt:Q9AI25 (EMBL:AF286670 (94 aa) fasta scores: E()=3.5e-35, 97.872% id in 94 aa
YP_006116853.1	3,4-dihydroxy-2-butanone-4-phosphate synthase
YP_006116857.1	outer membrane usher protein
YP_006116858.1	periplasmic pilin chaperone
YP_006116949.1	putative galactosamine-6-phosphate isomerase
YP_006117095.1	Similar, but truncated at the N-terminus, to Escherichia coli RpsE 30S ribosomal protein S5. UniProt:P0A7W1 (167 aa) fasta scores: E()=5.7e-34, 100.000% id in 107 aa
YP_006117122.1	general secretory pathway component, cryptic
YP_006117128.1	bacterioferritin, iron storage and detoxification protein
YP_006117130.1	C-terminus from codon 350 is similar to Metarhizium anisopliae. chi11 UniProt:O74199 (EMBL:AF036320 (522 aa) fasta scores: E()=2e-171, 87.961% id in 515 aa, and similar to entire sequence of Escherichia coli. ChiA UniProt:P13656 (EMBL:U18997 (897 aa) fasta scores: E()=0, 100.000% id in 897 aa
YP_006117162.1	putative fructoselysine transporter
YP_006117229.1	putative acetyltransferase
YP_006117272.1	Similar, but truncated at the N-terminus, to Escherichia coli yhhi h repeat-associated protein yhhi (orf-h). h repeat-associated protein yhhi (orf-h). UniProt:P28912 (378 aa) fasta scores: E()=5.1e-135, 100.000% id in 347 aa, and similar, but truncated at the N-terminus, to Escherichia coli B transposase, is4 family protein. UniProt:A2ULP9 (378 aa) fasta scores: E()=1e-134, 99.712% id in 347 aa
YP_006117341.1	Similar, but truncated at the N-terminus, to Escherichia coli Insk putative transposase for insertion sequence element IS150. UniProt:P19769 (283 aa) fasta scores: E()=5e-75, 100.000% id in 201 aa, and similar, but truncated at the N-terminus, to shigella flexneri serotype 5b (strain 8401). is150 orf2. UniProt:Q0SZE9 (EMBL:CP000266 (283 aa) fasta scores: E()=5e-75, 100.000% id in 201 aa
YP_006117349.1	Similar, but truncated at the N-terminus, to Escherichia coli. XylF UniProt:P37387 (EMBL:U00039 (330 aa) fasta scores: E()=8.1e-60, 99.441% id in 179 aa, and similar, but truncated the N-terminus, to Shigella flexneri. xylf UniProt:Q83PQ9 (EMBL:AE005674 (330 aa) fasta scores: E()=5.4e-60, 100.000% id in 179 aa
YP_006117379.1	Similar, but extended at the C-terminus, to Escherichia coli. yibv UniProt:A5A625 (EMBL:U00096 (111 aa) fasta scores: E()=2e-35, 98.165% id in 109 aa
YP_006117405.1	lipopolysaccharide heptosyltransferase 1
YP_006117411.1	UDP-galactose:(glucosyl) LPS alpha-1,3-galactosyltransferase
YP_006117445.1	required for maximal secretion of the heat-labile enterotoxin.
YP_006117455.1	Similar to C-terminus of Aeromonas salmonicida (strain a449). hypothetical protein. UniProt:A4SIH7 (EMBL:CP000644 (196 aa) fasta scores: E()=3.3e-06, 66.667% id in 36 aa
YP_006117463.1	Similar to codons 110 to 140 of Silicibacter pomeroyi. xanthine/uracil permease family protein. UniProt:Q5LV28 (EMBL:CP000031 (470 aa) fasta scores: E()=6.7, 43.750% id in 32 aa
YP_006117464.1	N-terminus is similar to Vibrio cholerae 1587. hypothetical protein. UniProt:A2P676 (EMBL:AAUR01000019 (109 aa) fasta scores: E()=0.46, 35.556% id in 45 aa
YP_006117465.1	Similar to N-terminus to codon 120 of Serratia proteamaculans 568. uncharacterised conserved protein ucp028301. UniProt:A0ISR6 (EMBL:AAUN01000012 (165 aa) fasta scores: E()=2.3e-29, 74.138% id in 116 aa
YP_006117488.1	Similar to N-terminus to codon 310 of Serratia marcescens. TraG1 UniProt:P95799 (EMBL:U60283 (563 aa) fasta scores: E()=0.00082, 21.382% id in 304 aa, and to entire protein of Escherichia coli. hypothetical protein. UniProt:Q8VQQ6 (EMBL:AF453442 (280 aa) fasta scores: E()=3.2e-107, 94.604% id in 278 aa
YP_006117700.1	Note the selenocystiene TGA read-through stop codon
YP_006117822.1	putative phosphate starvation-inducible membrane protein
YP_006117908.1	This CDS may be transcribed separately or may form part of a pseudogene with the downstream CDS
YP_006117909.1	This CDS may be transcribed separately or may form part of a pseudogene with the upstream CDS
YP_006117927.1	Note the selenocystiene TGA read-through stop codon
YP_006117966.1	alpha-galactosidase, NAD(P)-binding
YP_006118013.1	Similar to Yersinia pestis. mcrb UniProt:Q74PU0 (EMBL:AE017042 (687 aa) fasta scores: E()=2.1e-41, 34.443% id in 691 aa, and to C-terminus of Vibrio splendidus 12b01. GTPase subunit of restriction endonuclease-like. UniProt:A3UV37 (EMBL:AAMR01000025 (829 aa) fasta scores: E()=1e-102, 46.020% id in 691 aa
YP_006118015.1	Similar to Bifidobacterium longum hsdm hsdm. UniProt:Q8CY44 (855 aa) fasta scores: E()=3.2e-10, 70.909% id in 55 aa, and to ) yersinia pseudotuberculosis. putative type i restriction-modification system, methyltransferase subunit (n-6 dna methylase) (ec 2.1.1.72). UniProt:Q66F04 (EMBL:BX936398 (863 aa) fasta scores: E()=1.7e-15, 94.118% id in 51 aa
YP_006118016.1	no significant database hits
YP_006118020.1	integrase
YP_006118122.1	Similar but truncated at the N-terminus to Escherichia coli (strain k12). cybC UniProt:P0ABE7 (EMBL:S74736 (128 aa) fasta scores: E()=3.1e-32, 98.000% id in 100 aa, and similar but truncated at the N-terminus to Escherichia coli b. transcriptional regulator, fis family precursor. UniProt:A2UGY4 (EMBL:AAWW01000011 (128 aa) fasta scores: E()=1.3e-32, 100.000% id in 100 aa
YP_006118164.1	major type 1 subunit fimbrin (pilin)
YP_006118166.1	fimbrial chaperone
YP_006118167.1	outer membrane usher protein, type 1 fimbrial synthesis
YP_006118220.1	This CDS overlaps the opposite strand CDS by over 200 bp
YP_006118221.1	Similar to Escherichia coli (strain uti89/upec). putative uncharacterized protein. UniProt:Q1R855 (EMBL:CP000243 (167 aa) fasta scores: E()=4.5e-64, 94.545% id in 165 aa. This CDS overlaps the CDS on the opposite strand by more than 200 bp
YP_006118246.1	putative transposase
YP_006118247.1	putative IS element transposase
YP_006118263.1	peptide chain release factor RF-3
YP_006203749.1	similar to modulators of H-NS activity
YP_006203795.1	site of translational frameshifting that fuses INsA and InsB
YP_006203796.1	site of translational frameshifting that fuses INsA and InsB
YP_006203807.1	site of translational frameshifting that fuses INsA and InsB
YP_006203829.1	Operon characterised in PMID: 16552055. EtpC described as having similarity to glycosyltranferases; may be involved in post-translational modification of EtpA
YP_006203830.1	Operon characterised in PMID: 16552055. This version shorter than previously sequenced version due to internal deletion of one repeat unit (4 vs 5 x 228 aa)
YP_006203831.1	Operon characterised in PMID: 16552055. Probably responsible for secretion of EtpA
YP_006203832.1	putative IS element transposase