-- dump date 20140619_083207 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_008563154.1 544393324 16982253 join(4834941..4835601,1..98) 1 NC_022364.1 member of the SPOUT superfamily of methyltransferases; Derived by automated computational analysis using gene prediction method: Protein Homology.; RNA methyltransferase 98 16982253 LY180_00005 Escherichia coli LY180 RNA methyltransferase YP_008563154.1 4834941 D 1335916 CDS YP_008563155.1 544388863 16977678 336..2798 1 NC_022364.1 multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional aspartokinase I/homoserine dehydrogenase I 2798 thrA 16977678 thrA Escherichia coli LY180 bifunctional aspartokinase I/homoserine dehydrogenase I YP_008563155.1 336 D 1335916 CDS YP_008563156.1 544388864 16982252 2800..3732 1 NC_022364.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; Derived by automated computational analysis using gene prediction method: Protein Homology.; homoserine kinase 3732 16982252 LY180_00015 Escherichia coli LY180 homoserine kinase YP_008563156.1 2800 D 1335916 CDS YP_008563157.1 544388865 16977679 3733..5019 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; threonine synthase 5019 16977679 LY180_00020 Escherichia coli LY180 threonine synthase YP_008563157.1 3733 D 1335916 CDS YP_008563158.1 544388866 16977680 5233..5529 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 5529 16977680 LY180_00025 Escherichia coli LY180 hypothetical protein YP_008563158.1 5233 D 1335916 CDS YP_008563159.1 544392772 16977681 5789..6769 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 6769 16977681 LY180_00030 Escherichia coli LY180 hypothetical protein YP_008563159.1 5789 D 1335916 CDS YP_008563160.1 544388867 16977682 complement(6961..7737) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 7737 16977682 LY180_00035 Escherichia coli LY180 hypothetical protein YP_008563160.1 6961 R 1335916 CDS YP_008563161.1 544388868 16977683 complement(7807..9237) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sodium:alanine symporter 9237 16977683 LY180_00040 Escherichia coli LY180 sodium:alanine symporter YP_008563161.1 7807 R 1335916 CDS YP_008563162.1 544388869 16977684 9516..10469 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transaldolase 10469 16977684 LY180_00045 Escherichia coli LY180 transaldolase YP_008563162.1 9516 D 1335916 CDS YP_008563163.1 544388870 16977685 10584..11171 1 NC_022364.1 forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; molybdenum cofactor biosynthesis protein MogA 11171 mogA 16977685 mogA Escherichia coli LY180 molybdenum cofactor biosynthesis protein MogA YP_008563163.1 10584 D 1335916 CDS YP_008563164.1 544388871 16977686 complement(11206..11772) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 11772 16977686 LY180_00055 Escherichia coli LY180 hypothetical protein YP_008563164.1 11206 R 1335916 CDS YP_008563165.1 544388872 16977687 complement(11921..12634) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 12634 16977687 LY180_00060 Escherichia coli LY180 hypothetical protein YP_008563165.1 11921 R 1335916 CDS YP_008563166.1 544388873 16977688 complement(12660..13064) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 13064 16977688 LY180_00065 Escherichia coli LY180 hypothetical protein YP_008563166.1 12660 R 1335916 CDS YP_008563167.1 544388874 16977689 13441..15357 1 NC_022364.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; Derived by automated computational analysis using gene prediction method: Protein Homology.; molecular chaperone DnaK 15357 dnaK 16977689 dnaK Escherichia coli LY180 molecular chaperone DnaK YP_008563167.1 13441 D 1335916 CDS YP_008563168.1 544388875 16977690 15446..16576 1 NC_022364.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; Derived by automated computational analysis using gene prediction method: Protein Homology.; molecular chaperone DnaJ 16576 16977690 LY180_00075 Escherichia coli LY180 molecular chaperone DnaJ YP_008563168.1 15446 D 1335916 CDS YP_008563169.1 544388876 16977691 complement(16680..16832) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 16832 16977691 LY180_00080 Escherichia coli LY180 hypothetical protein YP_008563169.1 16680 R 1335916 CDS YP_008563170.1 544388877 16977692 17418..18584 1 NC_022364.1 exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH; Derived by automated computational analysis using gene prediction method: Protein Homology.; sodium:proton antiporter 18584 nhaA 16977692 nhaA Escherichia coli LY180 sodium:proton antiporter YP_008563170.1 17418 D 1335916 CDS YP_008563171.1 544388878 16977693 18644..19549 1 NC_022364.1 Na+/H+ antiporter regulatory protein; activates the genes nhaA and osmC; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 19549 nhaR 16977693 nhaR Escherichia coli LY180 transcriptional regulator YP_008563171.1 18644 D 1335916 CDS YP_008563172.1 544388879 16977694 complement(19588..20547) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 20547 16977694 LY180_00095 Escherichia coli LY180 hypothetical protein YP_008563172.1 19588 R 1335916 CDS YP_008563173.1 544388880 16977695 complement(20560..21705) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial outer membrane usher protein 21705 16977695 LY180_00100 Escherichia coli LY180 fimbrial outer membrane usher protein YP_008563173.1 20560 R 1335916 CDS YP_008563174.1 544392773 16977696 complement(22138..22701) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 22701 16977696 LY180_00105 Escherichia coli LY180 hypothetical protein YP_008563174.1 22138 R 1335916 CDS YP_008563175.1 544392774 16977697 complement(22748..23260) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 23260 16977697 LY180_00110 Escherichia coli LY180 hypothetical protein YP_008563175.1 22748 R 1335916 CDS YP_008563176.1 544388881 16977698 complement(24043..24306) 1 NC_022364.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S20 24306 rpsT 16977698 rpsT Escherichia coli LY180 30S ribosomal protein S20 YP_008563176.1 24043 R 1335916 CDS YP_008563177.1 544388882 16977699 24409..24627 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 24627 16977699 LY180_00120 Escherichia coli LY180 hypothetical protein YP_008563177.1 24409 D 1335916 CDS YP_008563178.1 544388883 16977700 24635..25576 1 NC_022364.1 catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional riboflavin kinase/FMN adenylyltransferase 25576 16977700 LY180_00125 Escherichia coli LY180 bifunctional riboflavin kinase/FMN adenylyltransferase YP_008563178.1 24635 D 1335916 CDS YP_008563179.1 544388884 16977701 25619..28435 1 NC_022364.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.; isoleucyl-tRNA synthetase 28435 ileS 16977701 ileS Escherichia coli LY180 isoleucyl-tRNA synthetase YP_008563179.1 25619 D 1335916 CDS YP_008563180.1 544388885 16977702 28435..28929 1 NC_022364.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; lipoprotein signal peptidase 28929 lspA 16977702 lspA Escherichia coli LY180 lipoprotein signal peptidase YP_008563180.1 28435 D 1335916 CDS YP_008563181.1 544388886 16977703 29017..29466 1 NC_022364.1 rotamase; accelerates isomerization of the peptidyl prolyl bond, involved in the folding of proteases; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidyl-prolyl cis-trans isomerase 29466 16977703 LY180_00140 Escherichia coli LY180 peptidyl-prolyl cis-trans isomerase YP_008563181.1 29017 D 1335916 CDS YP_008563182.1 544388887 16977704 29468..30418 1 NC_022364.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 30418 ispH 16977704 ispH Escherichia coli LY180 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_008563182.1 29468 D 1335916 CDS YP_008563183.1 544388888 16977705 30484..31398 1 NC_022364.1 catalyzes the hydrolysis of both purine and pyrimidine ribonucleosides; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonucleoside hydrolase 31398 16977705 LY180_00150 Escherichia coli LY180 ribonucleoside hydrolase YP_008563183.1 30484 D 1335916 CDS YP_008563184.1 544388889 16977706 31565..32386 1 NC_022364.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; dihydrodipicolinate reductase 32386 16977706 LY180_00155 Escherichia coli LY180 dihydrodipicolinate reductase YP_008563184.1 31565 D 1335916 CDS YP_008563185.1 544392775 16977707 complement(32629..32724) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 32724 16977707 LY180_00160 Escherichia coli LY180 hypothetical protein YP_008563185.1 32629 R 1335916 CDS YP_008563186.1 544388890 16977708 32842..33990 1 NC_022364.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; Derived by automated computational analysis using gene prediction method: Protein Homology.; carbamoyl phosphate synthase small subunit 33990 16977708 LY180_00165 Escherichia coli LY180 carbamoyl phosphate synthase small subunit YP_008563186.1 32842 D 1335916 CDS YP_008563187.1 544388891 16977709 34008..37229 1 NC_022364.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.; carbamoyl phosphate synthase large subunit 37229 carB 16977709 carB Escherichia coli LY180 carbamoyl phosphate synthase large subunit YP_008563187.1 34008 D 1335916 CDS YP_008563188.1 544388892 16977710 37490..37885 1 NC_022364.1 regulator of carnitine metabolism; induces the caiTABCDE and fixABCX operons; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 37885 16977710 LY180_00175 Escherichia coli LY180 transcriptional regulator YP_008563188.1 37490 D 1335916 CDS YP_008563189.1 544388893 16977711 complement(37971..38561) 1 NC_022364.1 involved in the synthesis of a cofactor required for carnitine dehydratase and carnitine racemase activities; Derived by automated computational analysis using gene prediction method: Protein Homology.; carnitine operon protein CaiE 38561 16977711 LY180_00180 Escherichia coli LY180 carnitine operon protein CaiE YP_008563189.1 37971 R 1335916 CDS YP_008563190.1 544388894 16977712 complement(38567..39352) 1 NC_022364.1 catalyzes the dehydration of L-carnitinyl-CoA to crotonobetainyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.; carnitinyl-CoA dehydratase 39352 16977712 LY180_00185 Escherichia coli LY180 carnitinyl-CoA dehydratase YP_008563190.1 38567 R 1335916 CDS YP_008563191.1 544388895 16977713 complement(39461..41014) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; crotonobetaine/carnitine-CoA ligase 41014 caiC 16977713 caiC Escherichia coli LY180 crotonobetaine/carnitine-CoA ligase YP_008563191.1 39461 R 1335916 CDS YP_008563192.1 544388896 16977714 complement(41088..42305) 1 NC_022364.1 catalyzes formation of L-carnitinyl-CoA by transfering the CoA moiety from gamma-butyrobetainyl-CoA, also catalyzes the formation of crotonobetainyl-CoA by transfer of CoA from gamma-butyrobetainyl-CoA or L-carnitinyl-CoA to crotonobetaine; Derived by automated computational analysis using gene prediction method: Protein Homology.; crotonobetainyl-CoA:carnitine CoA-transferase 42305 16977714 LY180_00195 Escherichia coli LY180 crotonobetainyl-CoA:carnitine CoA-transferase YP_008563192.1 41088 R 1335916 CDS YP_008563193.1 544388897 16977715 complement(42434..43576) 1 NC_022364.1 catalyzes the reduction of crotonobetainyl-CoA to gamma-butyrobetainyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.; crotonobetainyl-CoA dehydrogenase 43576 16977715 LY180_00200 Escherichia coli LY180 crotonobetainyl-CoA dehydrogenase YP_008563193.1 42434 R 1335916 CDS YP_008563194.1 544388898 16977716 complement(43607..45121) 1 NC_022364.1 catalyzes the exchange of L-carnitine for gamma-butyrobetaine in carnitine metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.; antiporter 45121 16977716 LY180_00205 Escherichia coli LY180 antiporter YP_008563194.1 43607 R 1335916 CDS YP_008563195.1 544388899 16977717 45595..46365 1 NC_022364.1 required for anaerobic carnitine reduction, may act to transfer electrons to crotonobetaine reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.; electron transfer flavoprotein FixB 46365 16977717 LY180_00210 Escherichia coli LY180 electron transfer flavoprotein FixB YP_008563195.1 45595 D 1335916 CDS YP_008563196.1 544388900 16977718 46380..47321 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; protein fixB 47321 16977718 LY180_00215 Escherichia coli LY180 protein fixB YP_008563196.1 46380 D 1335916 CDS YP_008563197.1 544388901 16977719 47372..48658 1 NC_022364.1 FAD/NAD(P)-binding domain; possibly part of an electron transfer system required for anaerobic carnitine reduction; Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase FixC 48658 16977719 LY180_00220 Escherichia coli LY180 oxidoreductase FixC YP_008563197.1 47372 D 1335916 CDS YP_008563198.1 544388902 16977720 48655..48942 1 NC_022364.1 necessary for anaerobic carnitine metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.; ferredoxin FixX 48942 16977720 LY180_00225 Escherichia coli LY180 ferredoxin FixX YP_008563198.1 48655 D 1335916 CDS YP_008563199.1 544388903 16977721 49001..50332 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; metabolite transporter 50332 16977721 LY180_00230 Escherichia coli LY180 metabolite transporter YP_008563199.1 49001 D 1335916 CDS YP_008563200.1 544388904 16977722 50440..50970 1 NC_022364.1 Required for full activity of KefC, a potassium-proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.; potassium transporter 50970 16977722 LY180_00235 Escherichia coli LY180 potassium transporter YP_008563200.1 50440 D 1335916 CDS YP_008563201.1 544388905 16977723 50963..52825 1 NC_022364.1 transport system that facilitates potassium-efflux; Derived by automated computational analysis using gene prediction method: Protein Homology.; potassium transporter 52825 16977723 LY180_00240 Escherichia coli LY180 potassium transporter YP_008563201.1 50963 D 1335916 CDS YP_008563202.1 544388906 16977724 52906..53496 1 NC_022364.1 catalyzes the reduction of dihydrofolate to tetrahydrofolate; Derived by automated computational analysis using gene prediction method: Protein Homology.; dihydrofolate reductase 53496 folA 16977724 folA Escherichia coli LY180 dihydrofolate reductase YP_008563202.1 52906 D 1335916 CDS YP_008563203.1 544388907 16977725 complement(53574..54416) 1 NC_022364.1 hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; Derived by automated computational analysis using gene prediction method: Protein Homology.; diadenosine tetraphosphatase 54416 apaH 16977725 apaH Escherichia coli LY180 diadenosine tetraphosphatase YP_008563203.1 53574 R 1335916 CDS YP_008563204.1 544388908 16977726 complement(54423..54800) 1 NC_022364.1 protein associated with Co2+ and Mg2+ efflux; Derived by automated computational analysis using gene prediction method: Protein Homology.; cobalt transporter 54800 apaG 16977726 apaG Escherichia coli LY180 cobalt transporter YP_008563204.1 54423 R 1335916 CDS YP_008563205.1 544388909 16977727 complement(54803..55624) 1 NC_022364.1 in Escherichia coli this enzyme catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; members of this protein family have secondary functions; Derived by automated computational analysis using gene prediction method: Protein Homology.; 16S rRNA methyltransferase 55624 ksgA 16977727 ksgA Escherichia coli LY180 16S rRNA methyltransferase YP_008563205.1 54803 R 1335916 CDS YP_008563206.1 544388910 16977728 complement(55621..56610) 1 NC_022364.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); Derived by automated computational analysis using gene prediction method: Protein Homology.; 4-hydroxythreonine-4-phosphate dehydrogenase 56610 pdxA 16977728 pdxA Escherichia coli LY180 4-hydroxythreonine-4-phosphate dehydrogenase YP_008563206.1 55621 R 1335916 CDS YP_008563207.1 544388911 16977729 complement(56610..57896) 1 NC_022364.1 Chaperone involved in the folding of extracytoplasmic proteins, especially OmpA, OmpF and LamB; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidyl-prolyl cis-trans isomerase 57896 16977729 LY180_00270 Escherichia coli LY180 peptidyl-prolyl cis-trans isomerase YP_008563207.1 56610 R 1335916 CDS YP_008563208.1 544388912 16977730 complement(57949..60303) 1 NC_022364.1 is involved in outer membrane permeability; Derived by automated computational analysis using gene prediction method: Protein Homology.; LPS assembly outer membrane complex protein LptD 60303 16977730 LY180_00275 Escherichia coli LY180 LPS assembly outer membrane complex protein LptD YP_008563208.1 57949 R 1335916 CDS YP_008563209.1 544388913 16977731 60558..61373 1 NC_022364.1 functions as a co-chaperone with DnaK; involved in regulation of colanic acid capsule; inner membrane protein; dimerized via transmembrane domain; J-like domain is cytoplasmic and can functionally substitute for DnaJ; stimulates synthesis of colanic acid mucoid capsule through the RcsB/C signal transduction system; Derived by automated computational analysis using gene prediction method: Protein Homology.; molecular chaperone DnaJ 61373 djlA 16977731 djlA Escherichia coli LY180 molecular chaperone DnaJ YP_008563209.1 60558 D 1335916 CDS YP_008563210.1 544388914 16977732 complement(61490..62149) 1 NC_022364.1 catalyzes the synthesis of pseudouridine from uracil-746 in 23S ribosomal RNA and from uracil-32 in the anticodon stem and loop of transfer RNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.; 23S rRNA/tRNA pseudouridine synthase A 62149 16977732 LY180_00285 Escherichia coli LY180 23S rRNA/tRNA pseudouridine synthase A YP_008563210.1 61490 R 1335916 CDS YP_008563211.1 544388915 16977733 complement(62161..65067) 1 NC_022364.1 transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-dependent helicase 65067 16977733 LY180_00290 Escherichia coli LY180 ATP-dependent helicase YP_008563211.1 62161 R 1335916 CDS YP_008563212.1 544388916 16977734 complement(65232..67583) 1 NC_022364.1 Has polymerase, DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA polymerase II 67583 16977734 LY180_00295 Escherichia coli LY180 DNA polymerase II YP_008563212.1 65232 R 1335916 CDS YP_008563213.1 544388917 16977735 complement(67658..68353) 1 NC_022364.1 catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; Derived by automated computational analysis using gene prediction method: Protein Homology.; L-ribulose-5-phosphate 4-epimerase 68353 araD 16977735 araD Escherichia coli LY180 L-ribulose-5-phosphate 4-epimerase YP_008563213.1 67658 R 1335916 CDS YP_008563214.1 544388918 16977736 complement(68522..70024) 1 NC_022364.1 catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.; arabinose isomerase 70024 16977736 LY180_00305 Escherichia coli LY180 arabinose isomerase YP_008563214.1 68522 R 1335916 CDS YP_008563215.1 544388919 16977737 complement(70035..71735) 1 NC_022364.1 catalyzes the phosphorylation of ribulose to ribulose 5-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribulokinase 71735 16977737 LY180_00310 Escherichia coli LY180 ribulokinase YP_008563215.1 70035 R 1335916 CDS YP_008563216.1 544388920 16977738 72065..72952 1 NC_022364.1 positive and negative regulator; regulates the araBAD and araFGH operons and other genes involved in the transport and catabolism of L-arabinose; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 72952 16977738 LY180_00315 Escherichia coli LY180 transcriptional regulator YP_008563216.1 72065 D 1335916 CDS YP_008563217.1 544388921 16977739 73038..73802 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 73802 16977739 LY180_00320 Escherichia coli LY180 membrane protein YP_008563217.1 73038 D 1335916 CDS YP_008563218.1 544388922 16977740 complement(73904..74602) 1 NC_022364.1 part of the ABC type transport system SsuABC for aliphatic sulfonates; with SsuA being the periplasmic substrate-binding subunit, SsuB the ATP-binding subunit and SsuC the permease; Derived by automated computational analysis using gene prediction method: Protein Homology.; aliphatic sulfonate ABC transporter ATP-binding protein 74602 ssuB 16977740 ssuB Escherichia coli LY180 aliphatic sulfonate ABC transporter ATP-binding protein YP_008563218.1 73904 R 1335916 CDS YP_008563219.1 544388923 16977741 complement(74586..76196) 1 NC_022364.1 permease; with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell; repressed in presence of exogenous thiamine; Derived by automated computational analysis using gene prediction method: Protein Homology.; thiamine transporter membrane protein 76196 thiP 16977741 thiP Escherichia coli LY180 thiamine transporter membrane protein YP_008563219.1 74586 R 1335916 CDS YP_008563220.1 544388924 16977742 complement(76172..77155) 1 NC_022364.1 part of the thiamine and TPP transport system tbpA-thiPQ; Derived by automated computational analysis using gene prediction method: Protein Homology.; thiamine ABC transporter substrate-binding protein 77155 tbpA 16977742 tbpA Escherichia coli LY180 thiamine ABC transporter substrate-binding protein YP_008563220.1 76172 R 1335916 CDS YP_008563221.1 544388925 16977743 complement(77319..78974) 1 NC_022364.1 activates sgrS under glucose-phosphate stress conditions; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 78974 16977743 LY180_00340 Escherichia coli LY180 transcriptional regulator YP_008563221.1 77319 R 1335916 CDS YP_008563222.1 544392776 16977744 79063..79194 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; inhibitor of glucose transporter 79194 16977744 LY180_00345 Escherichia coli LY180 inhibitor of glucose transporter YP_008563222.1 79063 D 1335916 CDS YP_008563223.1 544388926 16977745 79296..80474 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar transporter 80474 16977745 LY180_00350 Escherichia coli LY180 sugar transporter YP_008563223.1 79296 D 1335916 CDS YP_008563224.1 544388927 16977746 complement(80523..81128) 1 NC_022364.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; Derived by automated computational analysis using gene prediction method: Protein Homology.; isopropylmalate isomerase 81128 leuD 16977746 leuD Escherichia coli LY180 isopropylmalate isomerase YP_008563224.1 80523 R 1335916 CDS YP_008563225.1 544388928 16977747 complement(81139..82539) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-isopropylmalate dehydratase large subunit 82539 16977747 LY180_00360 Escherichia coli LY180 3-isopropylmalate dehydratase large subunit YP_008563225.1 81139 R 1335916 CDS YP_008563226.1 544388929 16977748 complement(82542..83633) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-isopropylmalate dehydrogenase 83633 16977748 LY180_00365 Escherichia coli LY180 3-isopropylmalate dehydrogenase YP_008563226.1 82542 R 1335916 CDS YP_008563227.1 544388930 16977749 complement(83633..85204) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-isopropylmalate synthase 85204 16977749 LY180_00370 Escherichia coli LY180 2-isopropylmalate synthase YP_008563227.1 83633 R 1335916 CDS YP_008563228.1 544388931 16977750 86043..86987 1 NC_022364.1 activator for leuABCD operon; member of LysR family of transcriptional activators; Derived by automated computational analysis using gene prediction method: Protein Homology.; leucine transcriptional activator 86987 leuO 16977750 leuO Escherichia coli LY180 leucine transcriptional activator YP_008563228.1 86043 D 1335916 CDS YP_008563229.1 544388932 16977751 87305..89029 1 NC_022364.1 catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; Derived by automated computational analysis using gene prediction method: Protein Homology.; acetolactate synthase 89029 16977751 LY180_00380 Escherichia coli LY180 acetolactate synthase YP_008563229.1 87305 D 1335916 CDS YP_008563230.1 544388933 16977752 89032..89523 1 NC_022364.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.; acetolactate synthase 89523 ilvH 16977752 ilvH Escherichia coli LY180 acetolactate synthase YP_008563230.1 89032 D 1335916 CDS YP_008563231.1 544388934 16977753 89703..90707 1 NC_022364.1 binds D-fructose as an inducer; involved in regulation of operons for central pathways of carbon metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 90707 16977753 LY180_00390 Escherichia coli LY180 transcriptional regulator YP_008563231.1 89703 D 1335916 CDS YP_008563232.1 544388935 16977754 91309..91767 1 NC_022364.1 MraZ; UPF0040; crystal structure shows similarity to AbrB; Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division protein MraZ 91767 16977754 LY180_00395 Escherichia coli LY180 cell division protein MraZ YP_008563232.1 91309 D 1335916 CDS YP_008563233.1 544388936 16977755 91769..92710 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 16S rRNA methyltransferase 92710 16977755 LY180_00400 Escherichia coli LY180 16S rRNA methyltransferase YP_008563233.1 91769 D 1335916 CDS YP_008563234.1 544388937 16977756 92707..93072 1 NC_022364.1 membrane bound cell division protein at septum containing leucine zipper motif; Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division protein FtsL 93072 16977756 LY180_00405 Escherichia coli LY180 cell division protein FtsL YP_008563234.1 92707 D 1335916 CDS YP_008563235.1 544388938 16977757 93088..94854 1 NC_022364.1 penicillin-binding protein 3; transpeptidase involved in septal peptidoglycan synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division protein FtsI 94854 16977757 LY180_00410 Escherichia coli LY180 cell division protein FtsI YP_008563235.1 93088 D 1335916 CDS YP_008563236.1 544388939 16977758 94841..96328 1 NC_022364.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 96328 murE 16977758 murE Escherichia coli LY180 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_008563236.1 94841 D 1335916 CDS YP_008563237.1 544388940 16977759 96325..97683 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 97683 murF 16977759 murF Escherichia coli LY180 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase YP_008563237.1 96325 D 1335916 CDS YP_008563238.1 544388941 16977760 97677..98759 1 NC_022364.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Derived by automated computational analysis using gene prediction method: Protein Homology.; phospho-N-acetylmuramoyl-pentapeptide- transferase 98759 mraY 16977760 mraY Escherichia coli LY180 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_008563238.1 97677 D 1335916 CDS YP_008563239.1 544388942 16977761 98762..100078 1 NC_022364.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 100078 murD 16977761 murD Escherichia coli LY180 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase YP_008563239.1 98762 D 1335916 CDS YP_008563240.1 544388943 16977762 100078..101322 1 NC_022364.1 integral membrane protein involved in stabilizing FstZ ring during cell division; Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division protein FtsW 101322 16977762 LY180_00435 Escherichia coli LY180 cell division protein FtsW YP_008563240.1 100078 D 1335916 CDS YP_008563241.1 544388944 16977763 101319..102386 1 NC_022364.1 N-acetylglucosaminyl transferase; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP-diphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 102386 murG 16977763 murG Escherichia coli LY180 UDP-diphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase YP_008563241.1 101319 D 1335916 CDS YP_008563242.1 544388945 16977764 102440..103915 1 NC_022364.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP-N-acetylmuramate--alanine ligase 103915 murC 16977764 murC Escherichia coli LY180 UDP-N-acetylmuramate--alanine ligase YP_008563242.1 102440 D 1335916 CDS YP_008563243.1 544388946 16977765 103908..104828 1 NC_022364.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; Derived by automated computational analysis using gene prediction method: Protein Homology.; D-alanine--D-alanine ligase 104828 ddl 16977765 ddl Escherichia coli LY180 D-alanine--D-alanine ligase YP_008563243.1 103908 D 1335916 CDS YP_008563244.1 544388947 16977766 104830..105660 1 NC_022364.1 involved in septum formation; Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division protein FtsQ 105660 16977766 LY180_00455 Escherichia coli LY180 cell division protein FtsQ YP_008563244.1 104830 D 1335916 CDS YP_008563245.1 544388948 16977767 105657..106919 1 NC_022364.1 ATP-binding involved in recruitment of FtsK to Z ring; essential cell division protein; colocalizes with FtsZ through direct interaction to the septal ring structure; structurally similar to eukaryotic actin; binds directly to the cell membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division protein FtsA 106919 ftsA 16977767 ftsA Escherichia coli LY180 cell division protein FtsA YP_008563245.1 105657 D 1335916 CDS YP_008563246.1 544388949 16977768 106980..108131 1 NC_022364.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidase M23 108131 16977768 LY180_00465 Escherichia coli LY180 peptidase M23 YP_008563246.1 106980 D 1335916 CDS YP_008563247.1 544388950 16977769 108232..109149 1 NC_022364.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase 109149 lpxC 16977769 lpxC Escherichia coli LY180 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase YP_008563247.1 108232 D 1335916 CDS YP_008563248.1 544392777 16977770 109380..109892 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 109892 16977770 LY180_00475 Escherichia coli LY180 hypothetical protein YP_008563248.1 109380 D 1335916 CDS YP_008563249.1 544388951 16977771 109954..112659 1 NC_022364.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; preprotein translocase subunit SecA 112659 secA 16977771 secA Escherichia coli LY180 preprotein translocase subunit SecA YP_008563249.1 109954 D 1335916 CDS YP_008563250.1 544388952 16977772 112719..113108 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; nucleoside triphosphate pyrophosphohydrolase 113108 16977772 LY180_00485 Escherichia coli LY180 nucleoside triphosphate pyrophosphohydrolase YP_008563250.1 112719 D 1335916 CDS YP_008563251.1 544388953 16977773 complement(113208..113405) 1 NC_022364.1 inhibits supercoiling by DNA gyrase by binding to the GyrB subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA gyrase inhibitor 113405 16977773 LY180_00490 Escherichia coli LY180 DNA gyrase inhibitor YP_008563251.1 113208 R 1335916 CDS YP_008563252.1 544388954 16977774 complement(113415..114158) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 114158 16977774 LY180_00495 Escherichia coli LY180 hypothetical protein YP_008563252.1 113415 R 1335916 CDS YP_008563253.1 544388955 16977775 complement(114158..114778) 1 NC_022364.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; dephospho-CoA kinase 114778 coaE 16977775 coaE Escherichia coli LY180 dephospho-CoA kinase YP_008563253.1 114158 R 1335916 CDS YP_008563254.1 544388956 16977776 115003..116046 1 NC_022364.1 catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; guanosine 5'-monophosphate oxidoreductase 116046 16977776 LY180_00505 Escherichia coli LY180 guanosine 5'-monophosphate oxidoreductase YP_008563254.1 115003 D 1335916 CDS YP_008563255.1 544388957 16977777 complement(116081..117283) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; type IV pilin biogenesis protein 117283 16977777 LY180_00510 Escherichia coli LY180 type IV pilin biogenesis protein YP_008563255.1 116081 R 1335916 CDS YP_008563256.1 544388958 16977778 complement(117273..118658) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 118658 16977778 LY180_00515 Escherichia coli LY180 hypothetical protein YP_008563256.1 117273 R 1335916 CDS YP_008563257.1 544388959 16977779 complement(118668..119108) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; major pilin subunit 119108 16977779 LY180_00520 Escherichia coli LY180 major pilin subunit YP_008563257.1 118668 R 1335916 CDS YP_008563258.1 544388960 16977780 complement(119311..120204) 1 NC_022364.1 catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; Derived by automated computational analysis using gene prediction method: Protein Homology.; nicotinate-nucleotide pyrophosphorylase 120204 16977780 LY180_00525 Escherichia coli LY180 nicotinate-nucleotide pyrophosphorylase YP_008563258.1 119311 R 1335916 CDS YP_008563259.1 544388961 16977781 120292..120843 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; N-acetyl-anhydromuranmyl-L-alanine amidase 120843 16977781 LY180_00530 Escherichia coli LY180 N-acetyl-anhydromuranmyl-L-alanine amidase YP_008563259.1 120292 D 1335916 CDS YP_008563260.1 544388962 16977782 120840..121694 1 NC_022364.1 involved in regulation of beta-lactamase; putative signaling protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; regulatory protein 121694 16977782 LY180_00535 Escherichia coli LY180 regulatory protein YP_008563260.1 120840 D 1335916 CDS YP_008563261.1 544388963 16977783 complement(121737..123107) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; aromatic amino acid transporter 123107 16977783 LY180_00540 Escherichia coli LY180 aromatic amino acid transporter YP_008563261.1 121737 R 1335916 CDS YP_008563262.1 544388964 16977784 123651..124415 1 NC_022364.1 activates lctPRD operon; autoregulates itself through repression of pdhR-aceEF-lpdA operon; regulates pyruvate dehydrogenase complex; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 124415 pdhR 16977784 pdhR Escherichia coli LY180 transcriptional regulator YP_008563262.1 123651 D 1335916 CDS YP_008563263.1 544388965 16977785 124576..127239 1 NC_022364.1 E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; Derived by automated computational analysis using gene prediction method: Protein Homology.; pyruvate dehydrogenase 127239 aceE 16977785 aceE Escherichia coli LY180 pyruvate dehydrogenase YP_008563263.1 124576 D 1335916 CDS YP_008563264.1 544388966 16977786 127254..129146 1 NC_022364.1 E2 component of pyruvate dehydrogenase multienzyme complex; in Escherichia coli AceF contains three N-terminal lipoyl domains; Derived by automated computational analysis using gene prediction method: Protein Homology.; dihydrolipoamide acetyltransferase 129146 aceF 16977786 aceF Escherichia coli LY180 dihydrolipoamide acetyltransferase YP_008563264.1 127254 D 1335916 CDS YP_008563265.1 544388967 16977787 129438..130895 1 NC_022364.1 E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; Derived by automated computational analysis using gene prediction method: Protein Homology.; dihydrolipoamide dehydrogenase 130895 16977787 LY180_00560 Escherichia coli LY180 dihydrolipoamide dehydrogenase YP_008563265.1 129438 D 1335916 CDS YP_008563266.1 544388968 16977788 complement(130966..132723) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 132723 16977788 LY180_00565 Escherichia coli LY180 hypothetical protein YP_008563266.1 130966 R 1335916 CDS YP_008563267.1 544388969 16977789 133078..135675 1 NC_022364.1 catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 135675 16977789 LY180_00570 Escherichia coli LY180 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase YP_008563267.1 133078 D 1335916 CDS YP_008563268.1 544388970 16977790 135851..136213 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 136213 16977790 LY180_00575 Escherichia coli LY180 hypothetical protein YP_008563268.1 135851 D 1335916 CDS YP_008563269.1 544388971 16977791 complement(136251..137045) 1 NC_022364.1 S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine; Derived by automated computational analysis using gene prediction method: Protein Homology.; S-adenosylmethionine decarboxylase 137045 16977791 LY180_00580 Escherichia coli LY180 S-adenosylmethionine decarboxylase YP_008563269.1 136251 R 1335916 CDS YP_008563270.1 544388972 16977792 complement(137061..137927) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; spermidine synthase 137927 16977792 LY180_00585 Escherichia coli LY180 spermidine synthase YP_008563270.1 137061 R 1335916 CDS YP_008563271.1 544388973 16977793 complement(138033..138380) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 138380 16977793 LY180_00590 Escherichia coli LY180 hypothetical protein YP_008563271.1 138033 R 1335916 CDS YP_008563272.1 544388974 16977794 138546..140096 1 NC_022364.1 laccase; copper-stimulated phenoloxidase and ferroxidase which may be involved in copper detoxification; Derived by automated computational analysis using gene prediction method: Protein Homology.; multicopper oxidase 140096 16977794 LY180_00595 Escherichia coli LY180 multicopper oxidase YP_008563272.1 138546 D 1335916 CDS YP_008563273.1 544388975 16977795 complement(140143..142533) 1 NC_022364.1 quinoprotein glucose dehydrogenase; catalyzes the formation of D-glucono-1,5-lactone from D-glucose and ubiquinone; Derived by automated computational analysis using gene prediction method: Protein Homology.; glucose dehydrogenase 142533 16977795 LY180_00600 Escherichia coli LY180 glucose dehydrogenase YP_008563273.1 140143 R 1335916 CDS YP_008563274.1 544388976 16977796 142739..143275 1 NC_022364.1 catalyzes the formation of inosine monophosphate from hypoxanthine and 5-phospho-alpha-D-ribose 1-diphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; hypoxanthine phosphoribosyltransferase 143275 16977796 LY180_00605 Escherichia coli LY180 hypoxanthine phosphoribosyltransferase YP_008563274.1 142739 D 1335916 CDS YP_008563275.1 544388977 16977797 complement(143316..143978) 1 NC_022364.1 catalyzes the interconversion of bicarbonate and carbon dioxide; Derived by automated computational analysis using gene prediction method: Protein Homology.; carbonic anhydrase 143978 16977797 LY180_00610 Escherichia coli LY180 carbonic anhydrase YP_008563275.1 143316 R 1335916 CDS YP_008563276.1 544388978 16977798 144087..145013 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug ABC transporter ATP-binding protein 145013 16977798 LY180_00615 Escherichia coli LY180 multidrug ABC transporter ATP-binding protein YP_008563276.1 144087 D 1335916 CDS YP_008563277.1 544388979 16977799 145010..145780 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 145780 16977799 LY180_00620 Escherichia coli LY180 membrane protein YP_008563277.1 145010 D 1335916 CDS YP_008563278.1 544388980 16977800 145885..146325 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS sugar transporter subunit IIA 146325 16977800 LY180_00625 Escherichia coli LY180 PTS sugar transporter subunit IIA YP_008563278.1 145885 D 1335916 CDS YP_008563279.1 544388981 16977801 146389..147618 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 147618 16977801 LY180_00630 Escherichia coli LY180 hypothetical protein YP_008563279.1 146389 D 1335916 CDS YP_008563280.1 544388982 16977802 complement(147622..148002) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; aspartate decarboxylase 148002 16977802 LY180_00635 Escherichia coli LY180 aspartate decarboxylase YP_008563280.1 147622 R 1335916 CDS YP_008563281.1 544388983 16977803 148276..149178 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 149178 16977803 LY180_00640 Escherichia coli LY180 hypothetical protein YP_008563281.1 148276 D 1335916 CDS YP_008563282.1 544388984 16977804 complement(149252..150103) 1 NC_022364.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; Derived by automated computational analysis using gene prediction method: Protein Homology.; pantoate--beta-alanine ligase 150103 panC 16977804 panC Escherichia coli LY180 pantoate--beta-alanine ligase YP_008563282.1 149252 R 1335916 CDS YP_008563283.1 544388985 16977805 complement(150115..150909) 1 NC_022364.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-methyl-2-oxobutanoate hydroxymethyltransferase 150909 panB 16977805 panB Escherichia coli LY180 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_008563283.1 150115 R 1335916 CDS YP_008563284.1 544392778 16977806 complement(151022..152296) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; fimbrial protein 152296 16977806 LY180_00655 Escherichia coli LY180 fimbrial protein YP_008563284.1 151022 R 1335916 CDS YP_008563285.1 544388986 16977807 complement(152349..152945) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein 152945 16977807 LY180_00660 Escherichia coli LY180 fimbrial protein YP_008563285.1 152349 R 1335916 CDS YP_008563286.1 544388987 16977808 complement(152972..153574) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein 153574 16977808 LY180_00665 Escherichia coli LY180 fimbrial protein YP_008563286.1 152972 R 1335916 CDS YP_008563287.1 544388988 16977809 complement(153589..154158) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein StaD 154158 16977809 LY180_00670 Escherichia coli LY180 fimbrial protein StaD YP_008563287.1 153589 R 1335916 CDS YP_008563288.1 544388989 16977810 complement(154175..156775) 1 NC_022364.1 similar to the fimbrial usher protein PapC; Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein 156775 16977810 LY180_00675 Escherichia coli LY180 fimbrial protein YP_008563288.1 154175 R 1335916 CDS YP_008563289.1 544388990 16977811 complement(156810..157550) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; chaperone protein EcpD 157550 16977811 LY180_00680 Escherichia coli LY180 chaperone protein EcpD YP_008563289.1 156810 R 1335916 CDS YP_008563290.1 544388991 16977812 complement(157655..158239) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein 158239 16977812 LY180_00685 Escherichia coli LY180 fimbrial protein YP_008563290.1 157655 R 1335916 CDS YP_008563291.1 544388992 16977813 complement(158609..159088) 1 NC_022364.1 catalyzes the formation of 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate from 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine and ATP; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 159088 16977813 LY180_00690 Escherichia coli LY180 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_008563291.1 158609 R 1335916 CDS YP_008563292.1 544392779 16977814 complement(159085..160398) 1 NC_022364.1 Polymerase that creates the 3' poly(A) tail found in some mRNA's; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; poly(A) polymerase I 160398 pcnB 16977814 pcnB Escherichia coli LY180 poly(A) polymerase I YP_008563292.1 159085 R 1335916 CDS YP_008563293.1 544388993 16977815 complement(160542..161468) 1 NC_022364.1 this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp; the modified tRNA does not bind elongation factor Tu; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutamyl-Q tRNA(Asp) ligase 161468 16977815 LY180_00700 Escherichia coli LY180 glutamyl-Q tRNA(Asp) ligase YP_008563293.1 160542 R 1335916 CDS YP_008563294.1 544388994 16977816 complement(161505..161960) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 161960 dksA 16977816 dksA Escherichia coli LY180 transcriptional regulator YP_008563294.1 161505 R 1335916 CDS YP_008563295.1 544388995 16977817 complement(162138..162842) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 162842 16977817 LY180_00710 Escherichia coli LY180 transcriptional regulator YP_008563295.1 162138 R 1335916 CDS YP_008563296.1 544388996 16977818 complement(162857..163387) 1 NC_022364.1 catalyzes the ligation and cleavage of of 2'-5' linkages in RNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2'-5' RNA ligase 163387 16977818 LY180_00715 Escherichia coli LY180 2'-5' RNA ligase YP_008563296.1 162857 R 1335916 CDS YP_008563297.1 544388997 16977819 163461..165890 1 NC_022364.1 similar in sequence to the ATP-dependent RNA helicase HrpA; Derived by automated computational analysis using gene prediction method: Protein Homology.; RNA helicase 165890 16977819 LY180_00720 Escherichia coli LY180 RNA helicase YP_008563297.1 163461 D 1335916 CDS YP_008563298.1 544388998 16977820 166086..168620 1 NC_022364.1 penicillin-binding protein 1b; contains transglycosylase and transpeptidase activity; major enzyme for peptidoglycan biosynthesis in Escherichia coli; transmembrane protein; forms dimers; three variants, one of which may be a degradation product, while the other appears to result from an alternative initiation site, are found within the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional glycosyl transferase/transpeptidase 168620 mrcB 16977820 mrcB Escherichia coli LY180 bifunctional glycosyl transferase/transpeptidase YP_008563298.1 166086 D 1335916 CDS YP_008563299.1 544388999 16977821 168840..171083 1 NC_022364.1 involved with the transport of ferrichrome across the outer membrane; binds the ferrichrome-iron ligand and interacts with the TonB protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; ferrichrome outer membrane transporter 171083 16977821 LY180_00730 Escherichia coli LY180 ferrichrome outer membrane transporter YP_008563299.1 168840 D 1335916 CDS YP_008563300.1 544392780 16977822 171134..171931 1 NC_022364.1 part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; iron-hydroxamate transporter ATP-binding protein 171931 16977822 LY180_00735 Escherichia coli LY180 iron-hydroxamate transporter ATP-binding protein YP_008563300.1 171134 D 1335916 CDS YP_008563301.1 544389000 16977823 171931..172821 1 NC_022364.1 Part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter; binds to all hydroxamate siderophores; Derived by automated computational analysis using gene prediction method: Protein Homology.; iron-hydroxamate transporter substrate-binding subunit 172821 16977823 LY180_00740 Escherichia coli LY180 iron-hydroxamate transporter substrate-binding subunit YP_008563301.1 171931 D 1335916 CDS YP_008563302.1 544389001 16977824 172818..174800 1 NC_022364.1 part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome; Derived by automated computational analysis using gene prediction method: Protein Homology.; iron-hydroxamate transporter permease subunit 174800 16977824 LY180_00745 Escherichia coli LY180 iron-hydroxamate transporter permease subunit YP_008563302.1 172818 D 1335916 CDS YP_008563303.1 544389002 16977825 complement(174835..176115) 1 NC_022364.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutamate-1-semialdehyde aminotransferase 176115 16977825 LY180_00750 Escherichia coli LY180 glutamate-1-semialdehyde aminotransferase YP_008563303.1 174835 R 1335916 CDS YP_008563304.1 544389003 16977826 176340..177761 1 NC_022364.1 Acts as an electrical shunt for an outwardly-directed proton pump that is linked to amino acid decarboxylation; Derived by automated computational analysis using gene prediction method: Protein Homology.; chloride channel protein 177761 16977826 LY180_00755 Escherichia coli LY180 chloride channel protein YP_008563304.1 176340 D 1335916 CDS YP_008563305.1 544389004 16977827 177843..178187 1 NC_022364.1 essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors; Derived by automated computational analysis using gene prediction method: Protein Homology.; iron-sulfur cluster insertion protein ErpA 178187 16977827 LY180_00760 Escherichia coli LY180 iron-sulfur cluster insertion protein ErpA YP_008563305.1 177843 D 1335916 CDS YP_008563306.1 544389005 16977828 complement(178234..178857) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 178857 16977828 LY180_00765 Escherichia coli LY180 hypothetical protein YP_008563306.1 178234 R 1335916 CDS YP_008563307.1 544389006 16977829 complement(178895..179695) 1 NC_022364.1 solute binding component of the vitamin B12 transport system BtuCDF; Derived by automated computational analysis using gene prediction method: Protein Homology.; vitamin B12 transporter 179695 16977829 LY180_00770 Escherichia coli LY180 vitamin B12 transporter YP_008563307.1 178895 R 1335916 CDS YP_008563308.1 544389007 16977830 complement(179688..180386) 1 NC_022364.1 enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; Derived by automated computational analysis using gene prediction method: Protein Homology.; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 180386 16977830 LY180_00775 Escherichia coli LY180 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase YP_008563308.1 179688 R 1335916 CDS YP_008563309.1 544389008 16977831 180470..181987 1 NC_022364.1 forms a homotetramer; requires magnesium for activity; catalyzes the hydrolysis of dGTP to form deoxyguanosine and triphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; deoxyguanosinetriphosphate triphosphohydrolase 181987 dgt 16977831 dgt Escherichia coli LY180 deoxyguanosinetriphosphate triphosphohydrolase YP_008563309.1 180470 D 1335916 CDS YP_008563310.1 544389009 16977832 182117..183541 1 NC_022364.1 protease Do; required at high temperature; degrades damaged proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; serine endoprotease 183541 16977832 LY180_00785 Escherichia coli LY180 serine endoprotease YP_008563310.1 182117 D 1335916 CDS YP_008563311.1 544389010 16977833 183696..184853 1 NC_022364.1 regulates the expression of the operons for the enzymes involved in galactarate, glucarate and glycerate utilization; Derived by automated computational analysis using gene prediction method: Protein Homology.; CdaR family transcriptional regulator 184853 16977833 LY180_00790 Escherichia coli LY180 CdaR family transcriptional regulator YP_008563311.1 183696 D 1335916 CDS YP_008563312.1 544389011 16977834 complement(184942..185328) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 185328 16977834 LY180_00795 Escherichia coli LY180 hypothetical protein YP_008563312.1 184942 R 1335916 CDS YP_008563313.1 544389012 16977835 complement(185640..186464) 1 NC_022364.1 catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 186464 dapD 16977835 dapD Escherichia coli LY180 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_008563313.1 185640 R 1335916 CDS YP_008563314.1 544389013 16977836 complement(186495..189167) 1 NC_022364.1 catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; PII uridylyl-transferase 189167 16977836 LY180_00805 Escherichia coli LY180 PII uridylyl-transferase YP_008563314.1 186495 R 1335916 CDS YP_008563315.1 544389014 16977837 complement(189229..190023) 1 NC_022364.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; Derived by automated computational analysis using gene prediction method: Protein Homology.; methionine aminopeptidase 190023 16977837 LY180_00810 Escherichia coli LY180 methionine aminopeptidase YP_008563315.1 189229 R 1335916 CDS YP_008563316.1 544389015 16977838 190193..191116 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S2 191116 16977838 LY180_00815 Escherichia coli LY180 30S ribosomal protein S2 YP_008563316.1 190193 D 1335916 CDS YP_008563317.1 544389016 16977839 191374..192225 1 NC_022364.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; Derived by automated computational analysis using gene prediction method: Protein Homology.; endo-1,4-D-glucanase 192225 tsf 16977839 tsf Escherichia coli LY180 endo-1,4-D-glucanase YP_008563317.1 191374 D 1335916 CDS YP_008563318.1 544389017 16977840 192372..193097 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; uridylate kinase 193097 16977840 LY180_00825 Escherichia coli LY180 uridylate kinase YP_008563318.1 192372 D 1335916 CDS YP_008563319.1 544389018 16977841 193389..193946 1 NC_022364.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribosome recycling factor 193946 frr 16977841 frr Escherichia coli LY180 ribosome recycling factor YP_008563319.1 193389 D 1335916 CDS YP_008563320.1 544389019 16977842 194038..195234 1 NC_022364.1 catalyzes the formation of 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose-5-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 195234 16977842 LY180_00835 Escherichia coli LY180 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_008563320.1 194038 D 1335916 CDS YP_008563321.1 544389020 16977843 195420..196181 1 NC_022364.1 catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP pyrophosphate synthase 196181 16977843 LY180_00840 Escherichia coli LY180 UDP pyrophosphate synthase YP_008563321.1 195420 D 1335916 CDS YP_008563322.1 544389021 16977844 196194..197051 1 NC_022364.1 catalyzes the synthesis of CDP-diglyceride from CTP and phosphatidate; Derived by automated computational analysis using gene prediction method: Protein Homology.; CDP-diglyceride synthase 197051 cdsA 16977844 cdsA Escherichia coli LY180 CDP-diglyceride synthase YP_008563322.1 196194 D 1335916 CDS YP_008563323.1 544389022 16977845 197063..198415 1 NC_022364.1 catalyzes the cleavage of RseA which activates the sigmaE-mediated stress response; Derived by automated computational analysis using gene prediction method: Protein Homology.; zinc metallopeptidase RseP 198415 16977845 LY180_00850 Escherichia coli LY180 zinc metallopeptidase RseP YP_008563323.1 197063 D 1335916 CDS YP_008563324.1 544389023 16977846 198445..200877 1 NC_022364.1 part of a complex with YfgL, YfiO, and NlpB involved in outer membrane protein biosynthesis; involved in the assembly of outer membrane proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; outer membrane protein assembly factor YaeT 200877 16977846 LY180_00855 Escherichia coli LY180 outer membrane protein assembly factor YaeT YP_008563324.1 198445 D 1335916 CDS YP_008563325.1 544389024 16977847 200999..201484 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; chaperone 201484 16977847 LY180_00860 Escherichia coli LY180 chaperone YP_008563325.1 200999 D 1335916 CDS YP_008563326.1 544389025 16977848 201488..202513 1 NC_022364.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase 202513 lpxD 16977848 lpxD Escherichia coli LY180 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase YP_008563326.1 201488 D 1335916 CDS YP_008563327.1 544389026 16977849 202618..203073 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hydroxymyristoyl-ACP dehydratase 203073 16977849 LY180_00870 Escherichia coli LY180 hydroxymyristoyl-ACP dehydratase YP_008563327.1 202618 D 1335916 CDS YP_008563328.1 544389027 16977850 203077..203865 1 NC_022364.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP-N-acetylglucosamine acyltransferase 203865 16977850 LY180_00875 Escherichia coli LY180 UDP-N-acetylglucosamine acyltransferase YP_008563328.1 203077 D 1335916 CDS YP_008563329.1 544389028 16977851 203865..205013 1 NC_022364.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; Derived by automated computational analysis using gene prediction method: Protein Homology.; lipid-A-disaccharide synthase 205013 lpxB 16977851 lpxB Escherichia coli LY180 lipid-A-disaccharide synthase YP_008563329.1 203865 D 1335916 CDS YP_008563330.1 544389029 16977852 205010..205606 1 NC_022364.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonuclease HII 205606 rnhB 16977852 rnhB Escherichia coli LY180 ribonuclease HII YP_008563330.1 205010 D 1335916 CDS YP_008563331.1 544389030 16977853 205643..209125 1 NC_022364.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA polymerase III subunit alpha 209125 dnaE 16977853 dnaE Escherichia coli LY180 DNA polymerase III subunit alpha YP_008563331.1 205643 D 1335916 CDS YP_008563332.1 544389031 16977854 209138..210097 1 NC_022364.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; acetyl-CoA carboxylase subunit alpha 210097 16977854 LY180_00895 Escherichia coli LY180 acetyl-CoA carboxylase subunit alpha YP_008563332.1 209138 D 1335916 CDS YP_008563333.1 544389032 16977855 210196..212337 1 NC_022364.1 constitutive; catalyzes the formation of cadaverine from lysine; Derived by automated computational analysis using gene prediction method: Protein Homology.; lysine decarboxylase CadA 212337 16977855 LY180_00900 Escherichia coli LY180 lysine decarboxylase CadA YP_008563333.1 210196 D 1335916 CDS YP_008563334.1 544389033 16977856 212394..212783 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; lyase 212783 16977856 LY180_00905 Escherichia coli LY180 lyase YP_008563334.1 212394 D 1335916 CDS YP_008563335.1 544389034 16977857 212848..214146 1 NC_022364.1 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU; ATP-dependent; responsible for modifying the wobble-base of the CAU anticodon of tRNAIle such that it exhibits proper recognition of the AUA codon rather than the AUG codon and is in turn properly recognized by isoleucyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA(Ile)-lysidine ligase 214146 tilS 16977857 tilS Escherichia coli LY180 tRNA(Ile)-lysidine ligase YP_008563335.1 212848 D 1335916 CDS YP_008563336.1 544389035 16977858 complement(214195..214455) 1 NC_022364.1 Suppresses temperature-sensitive mutations in essential genes by modulating rho-dependent transcription termination; Derived by automated computational analysis using gene prediction method: Protein Homology.; Rho-binding antiterminator 214455 16977858 LY180_00915 Escherichia coli LY180 Rho-binding antiterminator YP_008563336.1 214195 R 1335916 CDS YP_008563337.1 544389036 16977859 complement(214442..214642) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 214642 16977859 LY180_00920 Escherichia coli LY180 hypothetical protein YP_008563337.1 214442 R 1335916 CDS YP_008563338.1 544389037 16977860 214808..215353 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 215353 16977860 LY180_00925 Escherichia coli LY180 hypothetical protein YP_008563338.1 214808 D 1335916 CDS YP_008563339.1 544389038 16977861 215350..215772 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 215772 16977861 LY180_00930 Escherichia coli LY180 hypothetical protein YP_008563339.1 215350 D 1335916 CDS YP_008563340.1 544389039 16977862 215786..216496 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; lipoprotein involved with copper homeostasis and adhesion 216496 16977862 LY180_00935 Escherichia coli LY180 lipoprotein involved with copper homeostasis and adhesion YP_008563340.1 215786 D 1335916 CDS YP_008563341.1 544389040 16977863 complement(216651..217475) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 217475 16977863 LY180_00940 Escherichia coli LY180 hypothetical protein YP_008563341.1 216651 R 1335916 CDS YP_008563342.1 544389041 16977864 complement(217529..219247) 1 NC_022364.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); Derived by automated computational analysis using gene prediction method: Protein Homology.; prolyl-tRNA synthetase 219247 16977864 LY180_00945 Escherichia coli LY180 prolyl-tRNA synthetase YP_008563342.1 217529 R 1335916 CDS YP_008563343.1 544389042 16977865 complement(219358..220065) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 220065 16977865 LY180_00950 Escherichia coli LY180 hypothetical protein YP_008563343.1 219358 R 1335916 CDS YP_008563344.1 544389043 16977866 complement(220062..220466) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; outer membrane lipoprotein 220466 rcsF 16977866 rcsF Escherichia coli LY180 outer membrane lipoprotein YP_008563344.1 220062 R 1335916 CDS YP_008563345.1 544389044 16977867 complement(220584..221399) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; methionine ABC transporter substrate-binding protein 221399 metQ 16977867 metQ Escherichia coli LY180 methionine ABC transporter substrate-binding protein YP_008563345.1 220584 R 1335916 CDS YP_008563346.1 544389045 16977868 complement(221439..222092) 1 NC_022364.1 part of the MetNIQ methionine uptake system; Derived by automated computational analysis using gene prediction method: Protein Homology.; methionine ABC transporter permease 222092 16977868 LY180_00965 Escherichia coli LY180 methionine ABC transporter permease YP_008563346.1 221439 R 1335916 CDS YP_008563347.1 544389046 16977869 complement(222085..223116) 1 NC_022364.1 similar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutamine ABC transporter ATP-binding protein 223116 glnQ 16977869 glnQ Escherichia coli LY180 glutamine ABC transporter ATP-binding protein YP_008563347.1 222085 R 1335916 CDS YP_008563348.1 544389047 16977870 223304..223879 1 NC_022364.1 Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; D,D-heptose 1,7-bisphosphate phosphatase 223879 16977870 LY180_00975 Escherichia coli LY180 D,D-heptose 1,7-bisphosphate phosphatase YP_008563348.1 223304 D 1335916 CDS YP_008563349.1 544389048 16977877 229638..230441 1 NC_022364.1 catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2,5-diketo-D-gluconic acid reductase 230441 dkgB 16977877 dkgB Escherichia coli LY180 2,5-diketo-D-gluconic acid reductase YP_008563349.1 229638 D 1335916 CDS YP_008563350.1 544389049 16977878 complement(230438..231352) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LysR family transcripitonal regulator 231352 16977878 LY180_01015 Escherichia coli LY180 LysR family transcripitonal regulator YP_008563350.1 230438 R 1335916 CDS YP_008563351.1 544389050 16977879 231593..232393 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 232393 16977879 LY180_01020 Escherichia coli LY180 hypothetical protein YP_008563351.1 231593 D 1335916 CDS YP_008563352.1 544389051 16977880 232471..233241 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; S-adenosyl-L-methionine (SAM)-dependent methyltransferase PhcB 233241 16977880 LY180_01025 Escherichia coli LY180 S-adenosyl-L-methionine (SAM)-dependent methyltransferase PhcB YP_008563352.1 232471 D 1335916 CDS YP_008563353.1 544389052 16977881 complement(233289..234647) 1 NC_022364.1 catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues; may play a role in recycling muropeptides during cell division and/or cell elongation; in Helicobacter pylori MltD is a endolytic transglycosylase involved mainly in the rearrangement of the peptidoglycan layer of the bacterial cell wall; Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 234647 mltD 16977881 mltD Escherichia coli LY180 membrane protein YP_008563353.1 233289 R 1335916 CDS YP_008563354.1 544389053 16977882 complement(234719..235474) 1 NC_022364.1 catalyzes the hydrolysis of S-D-lactoylglutathione to D-lactic acid and reduced glutathione; plays an important role in cellular detoxification using glutathione; Derived by automated computational analysis using gene prediction method: Protein Homology.; hydroxyacylglutathione hydrolase 235474 16977882 LY180_01035 Escherichia coli LY180 hydroxyacylglutathione hydrolase YP_008563354.1 234719 R 1335916 CDS YP_008563355.1 544389054 16977883 235508..236230 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 236230 16977883 LY180_01040 Escherichia coli LY180 hypothetical protein YP_008563355.1 235508 D 1335916 CDS YP_008563356.1 544389055 16977884 complement(236227..236694) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonuclease H 236694 16977884 LY180_01045 Escherichia coli LY180 ribonuclease H YP_008563356.1 236227 R 1335916 CDS YP_008563357.1 544389056 16977885 236750..237490 1 NC_022364.1 3'-5' exonuclease of DNA polymerase III; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA polymerase III subunit epsilon 237490 16977885 LY180_01050 Escherichia coli LY180 DNA polymerase III subunit epsilon YP_008563357.1 236750 D 1335916 CDS YP_008563358.1 544389057 16977887 238030..238815 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 238815 16977887 LY180_01060 Escherichia coli LY180 hypothetical protein YP_008563358.1 238030 D 1335916 CDS YP_008563359.1 544392781 16977888 complement(238952..239431) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 239431 16977888 LY180_01065 Escherichia coli LY180 hypothetical protein YP_008563359.1 238952 R 1335916 CDS YP_008563360.1 544392782 16977889 complement(239441..240355) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 240355 16977889 LY180_01070 Escherichia coli LY180 membrane protein YP_008563360.1 239441 R 1335916 CDS YP_008563361.1 544389058 16977890 complement(240399..240881) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Hcp 240881 16977890 LY180_01075 Escherichia coli LY180 Hcp YP_008563361.1 240399 R 1335916 CDS YP_008563362.1 544389059 16977891 complement(240905..242257) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 242257 16977891 LY180_01080 Escherichia coli LY180 membrane protein YP_008563362.1 240905 R 1335916 CDS YP_008563363.1 544389060 16977892 complement(242268..245792) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; type VI secretion protein IcmF 245792 16977892 LY180_01085 Escherichia coli LY180 type VI secretion protein IcmF YP_008563363.1 242268 R 1335916 CDS YP_008563364.1 544389061 16977893 complement(245811..247223) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; CAD protein 247223 16977893 LY180_01090 Escherichia coli LY180 CAD protein YP_008563364.1 245811 R 1335916 CDS YP_008563365.1 544389062 16977894 complement(247228..247971) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; type VI secretion protein 247971 16977894 LY180_01095 Escherichia coli LY180 type VI secretion protein YP_008563365.1 247228 R 1335916 CDS YP_008563366.1 544389063 16977895 complement(247968..250775) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; protein disaggregation chaperone 250775 16977895 LY180_01100 Escherichia coli LY180 protein disaggregation chaperone YP_008563366.1 247968 R 1335916 CDS YP_008563367.1 544389064 16977896 complement(250784..251545) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 251545 16977896 LY180_01105 Escherichia coli LY180 membrane protein YP_008563367.1 250784 R 1335916 CDS YP_008563368.1 544389065 16977897 complement(251550..252881) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 252881 16977897 LY180_01110 Escherichia coli LY180 hypothetical protein YP_008563368.1 251550 R 1335916 CDS YP_008563369.1 544389066 16977898 complement(252884..253408) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 253408 16977898 LY180_01115 Escherichia coli LY180 hypothetical protein YP_008563369.1 252884 R 1335916 CDS YP_008563370.1 544389067 16977899 complement(253405..254685) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; type VI secretion system protein ImpI 254685 16977899 LY180_01120 Escherichia coli LY180 type VI secretion system protein ImpI YP_008563370.1 253405 R 1335916 CDS YP_008563371.1 544392783 16977900 complement(254710..255792) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; type VI secretion protein 255792 16977900 LY180_01125 Escherichia coli LY180 type VI secretion protein YP_008563371.1 254710 R 1335916 CDS YP_008563372.1 544389068 16977901 complement(255756..257606) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; type VI secretion protein 257606 16977901 LY180_01130 Escherichia coli LY180 type VI secretion protein YP_008563372.1 255756 R 1335916 CDS YP_008563373.1 544392784 16977902 complement(257610..258023) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; type VI secretion protein 258023 16977902 LY180_01135 Escherichia coli LY180 type VI secretion protein YP_008563373.1 257610 R 1335916 CDS YP_008563374.1 544392785 16977903 complement(258030..259505) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; type VI secretion protein 259505 16977903 LY180_01140 Escherichia coli LY180 type VI secretion protein YP_008563374.1 258030 R 1335916 CDS YP_008563375.1 544392786 16977904 complement(259556..259780) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 259780 16977904 LY180_01145 Escherichia coli LY180 hypothetical protein YP_008563375.1 259556 R 1335916 CDS YP_008563376.1 544389069 16977905 complement(259815..260315) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 260315 16977905 LY180_01150 Escherichia coli LY180 hypothetical protein YP_008563376.1 259815 R 1335916 CDS YP_008563377.1 544389070 16977906 260743..260886 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 260886 16977906 LY180_01155 Escherichia coli LY180 hypothetical protein YP_008563377.1 260743 D 1335916 CDS YP_008563378.1 544389071 16977907 261013..261531 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 261531 16977907 LY180_01160 Escherichia coli LY180 hypothetical protein YP_008563378.1 261013 D 1335916 CDS YP_008563379.1 544389072 16977908 261741..263882 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; type IV secretion protein Rhs 263882 16977908 LY180_01165 Escherichia coli LY180 type IV secretion protein Rhs YP_008563379.1 261741 D 1335916 CDS YP_008563380.1 544392787 16977909 263958..268007 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; type IV secretion protein Rhs 268007 16977909 LY180_01170 Escherichia coli LY180 type IV secretion protein Rhs YP_008563380.1 263958 D 1335916 CDS YP_008563381.1 544392788 16977910 267997..268404 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 268404 16977910 LY180_01175 Escherichia coli LY180 hypothetical protein YP_008563381.1 267997 D 1335916 CDS YP_008563382.1 544392789 16977911 268754..269167 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 269167 16977911 LY180_01180 Escherichia coli LY180 hypothetical protein YP_008563382.1 268754 D 1335916 CDS YP_008563383.1 544389073 16977912 269275..270411 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 270411 16977912 LY180_01185 Escherichia coli LY180 hypothetical protein YP_008563383.1 269275 D 1335916 CDS YP_008563384.1 544389074 16977913 complement(270453..271223) 1 NC_022364.1 NAD(P)-binding; Derived by automated computational analysis using gene prediction method: Protein Homology.; C-N hydrolase family amidase 271223 16977913 LY180_01190 Escherichia coli LY180 C-N hydrolase family amidase YP_008563384.1 270453 R 1335916 CDS YP_008563385.1 544389075 16977914 271377..271850 1 NC_022364.1 inactivates vertebrate C-type lysozyme; Derived by automated computational analysis using gene prediction method: Protein Homology.; C-lysozyme inhibitor 271850 16977914 LY180_01195 Escherichia coli LY180 C-lysozyme inhibitor YP_008563385.1 271377 D 1335916 CDS YP_008563386.1 544389076 16977915 complement(271893..274337) 1 NC_022364.1 functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.; acyl-CoA dehydrogenase 274337 fadE 16977915 fadE Escherichia coli LY180 acyl-CoA dehydrogenase YP_008563386.1 271893 R 1335916 CDS YP_008563387.1 544389077 16977916 274577..275155 1 NC_022364.1 catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoheptose isomerase 275155 gmhA 16977916 gmhA Escherichia coli LY180 phosphoheptose isomerase YP_008563387.1 274577 D 1335916 CDS YP_008563388.1 544389078 16977917 275361..276128 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glutamine amidotransferase 276128 16977917 LY180_01210 Escherichia coli LY180 glutamine amidotransferase YP_008563388.1 275361 D 1335916 CDS YP_008563389.1 544389079 16977918 complement(276099..276839) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transpeptidase 276839 16977918 LY180_01215 Escherichia coli LY180 transpeptidase YP_008563389.1 276099 R 1335916 CDS YP_008563390.1 544389080 16977919 complement(276995..277273) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; mRNA interferase YafQ 277273 16977919 LY180_01220 Escherichia coli LY180 mRNA interferase YafQ YP_008563390.1 276995 R 1335916 CDS YP_008563391.1 544389081 16977920 complement(277276..277536) 1 NC_022364.1 DNA-damage-inducible protein J; antitoxin of YafQ-DinJ toxin-antitoxin system; Derived by automated computational analysis using gene prediction method: Protein Homology.; antitoxin 277536 16977920 LY180_01225 Escherichia coli LY180 antitoxin YP_008563391.1 277276 R 1335916 CDS YP_008563392.1 544389082 16977921 277722..278495 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; endopeptidase 278495 16977921 LY180_01230 Escherichia coli LY180 endopeptidase YP_008563392.1 277722 D 1335916 CDS YP_008563393.1 544389083 16977922 complement(278552..278908) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA repair protein HhH-GPD 278908 16977922 LY180_01235 Escherichia coli LY180 DNA repair protein HhH-GPD YP_008563393.1 278552 R 1335916 CDS YP_008563394.1 544392790 16977923 complement(278901..279179) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; toxin HicA 279179 16977923 LY180_01240 Escherichia coli LY180 toxin HicA YP_008563394.1 278901 R 1335916 CDS YP_008563395.1 544389084 16977924 complement(279284..281377) 1 NC_022364.1 membrane protein involved in the flagellar export apparatus; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar biosynthesis protein FlhA 281377 flhA 16977924 flhA Escherichia coli LY180 flagellar biosynthesis protein FlhA YP_008563395.1 279284 R 1335916 CDS YP_008563396.1 544392791 16977925 complement(281361..282500) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; flagellar biosynthesis protein FlhB 282500 16977925 LY180_01250 Escherichia coli LY180 flagellar biosynthesis protein FlhB YP_008563396.1 281361 R 1335916 CDS YP_008563397.1 544392792 16977926 complement(282490..283272) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; flagellar biosynthesis protein FliR 283272 16977926 LY180_01255 Escherichia coli LY180 flagellar biosynthesis protein FliR YP_008563397.1 282490 R 1335916 CDS YP_008563398.1 544389085 16977927 complement(283274..283549) 1 NC_022364.1 with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar biosynthesis protein FliQ 283549 fliQ 16977927 fliQ Escherichia coli LY180 flagellar biosynthesis protein FliQ YP_008563398.1 283274 R 1335916 CDS YP_008563399.1 544389086 16977928 complement(283549..284301) 1 NC_022364.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar biosynthesis protein FliP 284301 fliP 16977928 fliP Escherichia coli LY180 flagellar biosynthesis protein FliP YP_008563399.1 283549 R 1335916 CDS YP_008563400.1 544392793 16977929 complement(284298..284669) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 284669 16977929 LY180_01270 Escherichia coli LY180 hypothetical protein YP_008563400.1 284298 R 1335916 CDS YP_008563401.1 544392794 16977930 complement(284662..285513) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 285513 16977930 LY180_01275 Escherichia coli LY180 hypothetical protein YP_008563401.1 284662 R 1335916 CDS YP_008563402.1 544392795 16977931 complement(285792..285896) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 285896 16977931 LY180_01280 Escherichia coli LY180 hypothetical protein YP_008563402.1 285792 R 1335916 CDS YP_008563403.1 544389087 16977932 285900..286886 1 NC_022364.1 transcriptional activator for pspABCE which are induced in response to phage proteins, membrane altering stresses, and impaired proton expor; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 286886 pspF 16977932 pspF Escherichia coli LY180 transcriptional regulator YP_008563403.1 285900 D 1335916 CDS YP_008563404.1 544392796 16977933 286901..287242 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; flagellar hook-basal body protein FliE 287242 16977933 LY180_01290 Escherichia coli LY180 flagellar hook-basal body protein FliE YP_008563404.1 286901 D 1335916 CDS YP_008563405.1 544392797 16977934 287247..288893 1 NC_022364.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; the Vibrio parahaemolyticus protein is associated with the lateral flagella; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; flagellar M-ring protein FliF 288893 fliF 16977934 fliF Escherichia coli LY180 flagellar M-ring protein FliF YP_008563405.1 287247 D 1335916 CDS YP_008563406.1 544392798 16977935 288871..289881 1 NC_022364.1 One of three proteins involved in switching the direction of the flagellar rotation; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; flagellar motor switch protein FliG 289881 fliG 16977935 fliG Escherichia coli LY180 flagellar motor switch protein FliG YP_008563406.1 288871 D 1335916 CDS YP_008563407.1 544392799 16977936 289885..290595 1 NC_022364.1 binds to and inhibits the function of flagella specific ATPase FliI; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; flagellar assembly protein FliH 290595 fliH 16977936 fliH Escherichia coli LY180 flagellar assembly protein FliH YP_008563407.1 289885 D 1335916 CDS YP_008563408.1 544389088 16977937 290588..291925 1 NC_022364.1 involved in type III protein export during flagellum assembly; Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP synthase 291925 fliI 16977937 fliI Escherichia coli LY180 ATP synthase YP_008563408.1 290588 D 1335916 CDS YP_008563409.1 544392800 16977938 291928..292362 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; flagellar export protein FliJ 292362 16977938 LY180_01315 Escherichia coli LY180 flagellar export protein FliJ YP_008563409.1 291928 D 1335916 CDS YP_008563410.1 544392801 16977939 292365..292760 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; glycerol-3-phosphate cytidylyltransferase 292760 16977939 LY180_01320 Escherichia coli LY180 glycerol-3-phosphate cytidylyltransferase YP_008563410.1 292365 D 1335916 CDS YP_008563411.1 544392802 16977940 complement(292915..293610) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; protein mom 293610 16977940 LY180_01325 Escherichia coli LY180 protein mom YP_008563411.1 292915 R 1335916 CDS YP_008563412.1 544389089 16977941 complement(293844..294425) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA invertase 294425 16977941 LY180_01330 Escherichia coli LY180 DNA invertase YP_008563412.1 293844 R 1335916 CDS YP_008563413.1 544392803 16977942 294455..295450 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 295450 16977942 LY180_01335 Escherichia coli LY180 hypothetical protein YP_008563413.1 294455 D 1335916 CDS YP_008563414.1 544389090 16977943 295453..295986 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail fiber assembly protein 295986 16977943 LY180_01340 Escherichia coli LY180 tail fiber assembly protein YP_008563414.1 295453 D 1335916 CDS YP_008563415.1 544389091 16977944 complement(296015..296542) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail fiber assembly protein 296542 16977944 LY180_01345 Escherichia coli LY180 tail fiber assembly protein YP_008563415.1 296015 R 1335916 CDS YP_008563416.1 544392804 16977945 complement(296545..298059) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; tail protein 298059 16977945 LY180_01350 Escherichia coli LY180 tail protein YP_008563416.1 296545 R 1335916 CDS YP_008563417.1 544392805 16977946 complement(298059..298601) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 298601 16977946 LY180_01355 Escherichia coli LY180 hypothetical protein YP_008563417.1 298059 R 1335916 CDS YP_008563418.1 544392806 16977947 complement(298592..299674) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 299674 16977947 LY180_01360 Escherichia coli LY180 hypothetical protein YP_008563418.1 298592 R 1335916 CDS YP_008563419.1 544389092 16977948 complement(299675..300112) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 300112 16977948 LY180_01365 Escherichia coli LY180 hypothetical protein YP_008563419.1 299675 R 1335916 CDS YP_008563420.1 544389093 16977949 complement(300109..300702) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 300702 16977949 LY180_01370 Escherichia coli LY180 hypothetical protein YP_008563420.1 300109 R 1335916 CDS YP_008563421.1 544392807 16977950 complement(300690..301829) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; baseplate protein 301829 16977950 LY180_01375 Escherichia coli LY180 baseplate protein YP_008563421.1 300690 R 1335916 CDS YP_008563422.1 544389094 16977951 complement(301822..303309) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DMT family permease 303309 16977951 LY180_01380 Escherichia coli LY180 DMT family permease YP_008563422.1 301822 R 1335916 CDS YP_008563423.1 544392808 16977952 complement(303314..305386) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 305386 16977952 LY180_01385 Escherichia coli LY180 hypothetical protein YP_008563423.1 303314 R 1335916 CDS YP_008563424.1 544393325 16977953 complement(305401..305547) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 305547 16977953 LY180_01390 Escherichia coli LY180 hypothetical protein YP_008563424.1 305401 R 1335916 CDS YP_008563425.1 544389095 16977954 complement(305531..305965) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 305965 16977954 LY180_01395 Escherichia coli LY180 hypothetical protein YP_008563425.1 305531 R 1335916 CDS YP_008563426.1 544389096 16977955 complement(305975..306331) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 306331 16977955 LY180_01400 Escherichia coli LY180 tail protein YP_008563426.1 305975 R 1335916 CDS YP_008563427.1 544389097 16977956 complement(306341..307828) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 307828 16977956 LY180_01405 Escherichia coli LY180 tail protein YP_008563427.1 306341 R 1335916 CDS YP_008563428.1 544389098 16977957 complement(307825..308031) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 308031 16977957 LY180_01410 Escherichia coli LY180 hypothetical protein YP_008563428.1 307825 R 1335916 CDS YP_008563429.1 544389099 16977958 complement(308015..308563) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 308563 16977958 LY180_01415 Escherichia coli LY180 hypothetical protein YP_008563429.1 308015 R 1335916 CDS YP_008563430.1 544389100 16977959 complement(308563..308988) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 308988 16977959 LY180_01420 Escherichia coli LY180 hypothetical protein YP_008563430.1 308563 R 1335916 CDS YP_008563431.1 544392809 16977960 complement(308985..309395) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 309395 16977960 LY180_01425 Escherichia coli LY180 hypothetical protein YP_008563431.1 308985 R 1335916 CDS YP_008563432.1 544389101 16977961 complement(309462..310379) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; head protein 310379 16977961 LY180_01430 Escherichia coli LY180 head protein YP_008563432.1 309462 R 1335916 CDS YP_008563433.1 544389102 16977962 complement(310376..311461) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phage scaffold protein 311461 16977962 LY180_01435 Escherichia coli LY180 phage scaffold protein YP_008563433.1 310376 R 1335916 CDS YP_008563434.1 544392810 16977963 complement(311658..312116) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; G protein 312116 16977963 LY180_01440 Escherichia coli LY180 G protein YP_008563434.1 311658 R 1335916 CDS YP_008563435.1 544389103 16977964 complement(312125..313444) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; F protein 313444 16977964 LY180_01445 Escherichia coli LY180 F protein YP_008563435.1 312125 R 1335916 CDS YP_008563436.1 544389104 16977965 complement(313425..314963) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 314963 16977965 LY180_01450 Escherichia coli LY180 hypothetical protein YP_008563436.1 313425 R 1335916 CDS YP_008563437.1 544389105 16977966 complement(314963..316618) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 316618 16977966 LY180_01455 Escherichia coli LY180 hypothetical protein YP_008563437.1 314963 R 1335916 CDS YP_008563438.1 544389106 16977967 complement(316626..317201) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 317201 16977967 LY180_01460 Escherichia coli LY180 hypothetical protein YP_008563438.1 316626 R 1335916 CDS YP_008563439.1 544389107 16977968 complement(317213..317503) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 317503 16977968 LY180_01465 Escherichia coli LY180 hypothetical protein YP_008563439.1 317213 R 1335916 CDS YP_008563440.1 544389108 16977969 complement(317500..317799) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 317799 16977969 LY180_01470 Escherichia coli LY180 hypothetical protein YP_008563440.1 317500 R 1335916 CDS YP_008563441.1 544389109 16977970 complement(317799..317993) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 317993 16977970 LY180_01475 Escherichia coli LY180 hypothetical protein YP_008563441.1 317799 R 1335916 CDS YP_008563442.1 544389110 16977971 complement(318152..318538) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 318538 16977971 LY180_01480 Escherichia coli LY180 hypothetical protein YP_008563442.1 318152 R 1335916 CDS YP_008563443.1 544389111 16977972 complement(318522..319037) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; lysozyme 319037 16977972 LY180_01485 Escherichia coli LY180 lysozyme YP_008563443.1 318522 R 1335916 CDS YP_008563444.1 544392811 16977973 complement(319132..319554) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; positive regulator of late transcription 319554 16977973 LY180_01490 Escherichia coli LY180 positive regulator of late transcription YP_008563444.1 319132 R 1335916 CDS YP_008563445.1 544389112 16977974 complement(319567..319686) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 319686 16977974 LY180_01495 Escherichia coli LY180 hypothetical protein YP_008563445.1 319567 R 1335916 CDS YP_008563446.1 544392812 16977975 complement(319696..320058) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 320058 16977975 LY180_01500 Escherichia coli LY180 hypothetical protein YP_008563446.1 319696 R 1335916 CDS YP_008563447.1 544389113 16977976 complement(320051..320269) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 320269 16977976 LY180_01505 Escherichia coli LY180 hypothetical protein YP_008563447.1 320051 R 1335916 CDS YP_008563448.1 544392813 16977977 complement(320347..320736) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; Middle operon regulator 320736 16977977 LY180_01510 Escherichia coli LY180 Middle operon regulator YP_008563448.1 320347 R 1335916 CDS YP_008563449.1 544389114 16977978 complement(320733..321284) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 321284 16977978 LY180_01515 Escherichia coli LY180 hypothetical protein YP_008563449.1 320733 R 1335916 CDS YP_008563450.1 544389115 16977979 complement(321560..321862) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 321862 16977979 LY180_01520 Escherichia coli LY180 hypothetical protein YP_008563450.1 321560 R 1335916 CDS YP_008563451.1 544389116 16977980 complement(321864..322046) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 322046 16977980 LY180_01525 Escherichia coli LY180 hypothetical protein YP_008563451.1 321864 R 1335916 CDS YP_008563452.1 544389117 16977981 complement(322033..322563) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 322563 16977981 LY180_01530 Escherichia coli LY180 hypothetical protein YP_008563452.1 322033 R 1335916 CDS YP_008563453.1 544389118 16977982 complement(322563..323093) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 323093 16977982 LY180_01535 Escherichia coli LY180 hypothetical protein YP_008563453.1 322563 R 1335916 CDS YP_008563454.1 544389119 16977983 complement(323192..323716) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; host-nuclease inhibitor protein Gam 323716 16977983 LY180_01540 Escherichia coli LY180 host-nuclease inhibitor protein Gam YP_008563454.1 323192 R 1335916 CDS YP_008563455.1 544389120 16977984 complement(323736..324035) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 324035 16977984 LY180_01545 Escherichia coli LY180 hypothetical protein YP_008563455.1 323736 R 1335916 CDS YP_008563456.1 544389121 16977985 complement(324036..324455) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 324455 16977985 LY180_01550 Escherichia coli LY180 hypothetical protein YP_008563456.1 324036 R 1335916 CDS YP_008563457.1 544389122 16977986 complement(324470..324733) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 324733 16977986 LY180_01555 Escherichia coli LY180 hypothetical protein YP_008563457.1 324470 R 1335916 CDS YP_008563458.1 544389123 16977987 complement(324745..324975) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 324975 16977987 LY180_01560 Escherichia coli LY180 hypothetical protein YP_008563458.1 324745 R 1335916 CDS YP_008563459.1 544389124 16977988 complement(324978..325205) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cim 325205 16977988 LY180_01565 Escherichia coli LY180 cim YP_008563459.1 324978 R 1335916 CDS YP_008563460.1 544392814 16977989 complement(325221..326159) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; DNA transposition protein 326159 16977989 LY180_01570 Escherichia coli LY180 DNA transposition protein YP_008563460.1 325221 R 1335916 CDS YP_008563461.1 544392815 16977990 complement(326198..328189) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase 328189 16977990 LY180_01575 Escherichia coli LY180 transposase YP_008563461.1 326198 R 1335916 CDS YP_008563462.1 544389125 16977991 complement(328191..328418) 1 NC_022364.1 activator of maltose metabolism genes; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 328418 16977991 LY180_01580 Escherichia coli LY180 transcriptional regulator YP_008563462.1 328191 R 1335916 CDS YP_008563463.1 544392816 16977992 328588..329178 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; repressor 329178 16977992 LY180_01585 Escherichia coli LY180 repressor YP_008563463.1 328588 D 1335916 CDS YP_008563464.1 544392817 16977993 complement(329600..332116) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; glycosyl transferase 332116 16977993 LY180_01590 Escherichia coli LY180 glycosyl transferase YP_008563464.1 329600 R 1335916 CDS YP_008563465.1 544392818 16977994 complement(332223..333152) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; lysine-N-methylase 333152 16977994 LY180_01595 Escherichia coli LY180 lysine-N-methylase YP_008563465.1 332223 R 1335916 CDS YP_008563466.1 544392819 16977995 complement(333279..333677) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; lateral flagellar chaperone protein 333677 16977995 LY180_01600 Escherichia coli LY180 lateral flagellar chaperone protein YP_008563466.1 333279 R 1335916 CDS YP_008563467.1 544392820 16977996 complement(333720..333998) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; anti-sigma-28 factor FlgM 333998 16977996 LY180_01605 Escherichia coli LY180 anti-sigma-28 factor FlgM YP_008563467.1 333720 R 1335916 CDS YP_008563468.1 544392821 16977997 complement(334079..334816) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; flagella basal body P-ring formation protein FlgA 334816 16977997 LY180_01610 Escherichia coli LY180 flagella basal body P-ring formation protein FlgA YP_008563468.1 334079 R 1335916 CDS YP_008563469.1 544389126 16977998 334889..335233 1 NC_022364.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod; Vibrio parahaemolyticus protein is associated with the polar flagella; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar basal body rod protein FlgB 335233 flgB 16977998 flgB Escherichia coli LY180 flagellar basal body rod protein FlgB YP_008563469.1 334889 D 1335916 CDS YP_008563470.1 544389127 16977999 335236..335667 1 NC_022364.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar basal body rod protein FlgC 335667 flgC 16977999 flgC Escherichia coli LY180 flagellar basal body rod protein FlgC YP_008563470.1 335236 D 1335916 CDS YP_008563471.1 544392822 16978000 335667..336380 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; flagellar hook capping protein 336380 16978000 LY180_01625 Escherichia coli LY180 flagellar hook capping protein YP_008563471.1 335667 D 1335916 CDS YP_008563472.1 544389128 16978001 336465..337667 1 NC_022364.1 the hook connects flagellar basal body to the flagellar filament; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar hook protein FlgE 337667 flgE 16978001 flgE Escherichia coli LY180 flagellar hook protein FlgE YP_008563472.1 336465 D 1335916 CDS YP_008563473.1 544392823 16978002 337667..338404 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; flagellar basal body rod protein FlgF 338404 16978002 LY180_01635 Escherichia coli LY180 flagellar basal body rod protein FlgF YP_008563473.1 337667 D 1335916 CDS YP_008563474.1 544389129 16978003 338483..339268 1 NC_022364.1 makes up the distal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar basal body rod protein FlgG 339268 flgG 16978003 flgG Escherichia coli LY180 flagellar basal body rod protein FlgG YP_008563474.1 338483 D 1335916 CDS YP_008563475.1 544392824 16978004 339540..340205 1 NC_022364.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; the Yersinia have 2 copies of flgH; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; flagellar basal body L-ring protein 340205 flgH 16978004 flgH Escherichia coli LY180 flagellar basal body L-ring protein YP_008563475.1 339540 D 1335916 CDS YP_008563476.1 544389130 16978005 340220..341320 1 NC_022364.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar basal body P-ring protein 341320 flgI 16978005 flgI Escherichia coli LY180 flagellar basal body P-ring protein YP_008563476.1 340220 D 1335916 CDS YP_008563477.1 544392825 16978006 341320..341619 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; rod binding protein 341619 16978006 LY180_01655 Escherichia coli LY180 rod binding protein YP_008563477.1 341320 D 1335916 CDS YP_008563478.1 544392826 16978007 341802..343178 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; flagellar hook-associated protein FlgK 343178 16978007 LY180_01660 Escherichia coli LY180 flagellar hook-associated protein FlgK YP_008563478.1 341802 D 1335916 CDS YP_008563479.1 544392827 16978008 343193..344122 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; flagellar hook protein 344122 16978008 LY180_01665 Escherichia coli LY180 flagellar hook protein YP_008563479.1 343193 D 1335916 CDS YP_008563480.1 544392828 16978009 344139..345116 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; lateral flagellar hook associated protein 345116 16978009 LY180_01670 Escherichia coli LY180 lateral flagellar hook associated protein YP_008563480.1 344139 D 1335916 CDS YP_008563481.1 544392829 16978010 complement(345175..346017) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; CadC family transcriptional regulator 346017 16978010 LY180_01675 Escherichia coli LY180 CadC family transcriptional regulator YP_008563481.1 345175 R 1335916 CDS YP_008563482.1 544392830 16978011 346175..347383 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 347383 16978011 LY180_01680 Escherichia coli LY180 hypothetical protein YP_008563482.1 346175 D 1335916 CDS YP_008563483.1 544392831 16978012 347841..348755 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; flagellin 348755 16978012 LY180_01685 Escherichia coli LY180 flagellin YP_008563483.1 347841 D 1335916 CDS YP_008563484.1 544392832 16978013 348962..350278 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; flagellar hook protein 350278 16978013 LY180_01690 Escherichia coli LY180 flagellar hook protein YP_008563484.1 348962 D 1335916 CDS YP_008563485.1 544392833 16978014 350301..350693 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; flagellar biosynthesis protein FliS 350693 16978014 LY180_01695 Escherichia coli LY180 flagellar biosynthesis protein FliS YP_008563485.1 350301 D 1335916 CDS YP_008563486.1 544392834 16978015 350698..351009 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; lateral flagellar chaperone protein 351009 16978015 LY180_01700 Escherichia coli LY180 lateral flagellar chaperone protein YP_008563486.1 350698 D 1335916 CDS YP_008563487.1 544392835 16978016 351006..352067 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; flagellar hook-length control protein FliK 352067 16978016 LY180_01705 Escherichia coli LY180 flagellar hook-length control protein FliK YP_008563487.1 351006 D 1335916 CDS YP_008563488.1 544392836 16978017 352075..352542 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; flagellar basal body protein FliL 352542 16978017 LY180_01710 Escherichia coli LY180 flagellar basal body protein FliL YP_008563488.1 352075 D 1335916 CDS YP_008563489.1 544392837 16978018 352562..353278 1 NC_022364.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; RNA polymerase sigma 70 353278 16978018 LY180_01715 Escherichia coli LY180 RNA polymerase sigma 70 YP_008563489.1 352562 D 1335916 CDS YP_008563490.1 544392838 16978019 353291..354154 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; flagellar motor protein MotA 354154 16978019 LY180_01720 Escherichia coli LY180 flagellar motor protein MotA YP_008563490.1 353291 D 1335916 CDS YP_008563491.1 544389131 16978020 354157..355080 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 355080 16978020 LY180_01725 Escherichia coli LY180 hypothetical protein YP_008563491.1 354157 D 1335916 CDS YP_008563492.1 544389132 16978021 355151..356206 1 NC_022364.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA polymerase IV 356206 16978021 LY180_01730 Escherichia coli LY180 DNA polymerase IV YP_008563492.1 355151 D 1335916 CDS YP_008563493.1 544389133 16978022 356203..356655 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acyltransferase 356655 16978022 LY180_01735 Escherichia coli LY180 acyltransferase YP_008563493.1 356203 D 1335916 CDS YP_008563494.1 544389134 16978023 356874..358040 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 358040 16978023 LY180_01740 Escherichia coli LY180 hypothetical protein YP_008563494.1 356874 D 1335916 CDS YP_008563495.1 544389135 16978024 358037..358651 1 NC_022364.1 similar to release factor 1 and 2; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide chain release factor 358651 prfH 16978024 prfH Escherichia coli LY180 peptide chain release factor YP_008563495.1 358037 D 1335916 CDS YP_008563496.1 544389136 16978025 complement(358708..360165) 1 NC_022364.1 catalyzes the hydrolysis of Xaa-His dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.; aminoacyl-histidine dipeptidase 360165 16978025 LY180_01750 Escherichia coli LY180 aminoacyl-histidine dipeptidase YP_008563496.1 358708 R 1335916 CDS YP_008563497.1 544389137 16978026 360426..360884 1 NC_022364.1 catalyzes the conversion of guanine, xanthine and, to a lesser extent, hypoxanthine to GMP, XMP and IMP, respectively; Derived by automated computational analysis using gene prediction method: Protein Homology.; xanthine phosphoribosyltransferase 360884 16978026 LY180_01755 Escherichia coli LY180 xanthine phosphoribosyltransferase YP_008563497.1 360426 D 1335916 CDS YP_008563498.1 544389138 16978027 360976..362220 1 NC_022364.1 forms a 1:1 complex with the unphosphorylated from of enzyme IIAGlc; FrsA may promote fermentation; Derived by automated computational analysis using gene prediction method: Protein Homology.; fermentation/respiration switch protein 362220 frsA 16978027 frsA Escherichia coli LY180 fermentation/respiration switch protein YP_008563498.1 360976 D 1335916 CDS YP_008563499.1 544389139 16978028 362278..362679 1 NC_022364.1 involved in the expression of csgBA which is involved in curli formation; interacts with sigmaS; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 362679 16978028 LY180_01765 Escherichia coli LY180 transcriptional regulator YP_008563499.1 362278 D 1335916 CDS YP_008563500.1 544389140 16978029 complement(362718..363773) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; outer membrane phosphoporin protein E 363773 16978029 LY180_01770 Escherichia coli LY180 outer membrane phosphoporin protein E YP_008563500.1 362718 R 1335916 CDS YP_008563501.1 544389141 16978030 364061..365164 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; gamma-glutamyl kinase 365164 16978030 LY180_01775 Escherichia coli LY180 gamma-glutamyl kinase YP_008563501.1 364061 D 1335916 CDS YP_008563502.1 544389142 16978031 365176..366429 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; gamma-glutamyl phosphate reductase 366429 16978031 LY180_01780 Escherichia coli LY180 gamma-glutamyl phosphate reductase YP_008563502.1 365176 D 1335916 CDS YP_008563503.1 544392839 16978033 complement(366746..367156) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 367156 16978033 LY180_01790 Escherichia coli LY180 hypothetical protein YP_008563503.1 366746 R 1335916 CDS YP_008563504.1 544392840 16978034 complement(367135..368091) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 368091 16978034 LY180_01795 Escherichia coli LY180 hypothetical protein YP_008563504.1 367135 R 1335916 CDS YP_008563505.1 544389143 16978035 complement(368101..370299) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; xanthine dehydrogenase 370299 16978035 LY180_01800 Escherichia coli LY180 xanthine dehydrogenase YP_008563505.1 368101 R 1335916 CDS YP_008563506.1 544392841 16978036 complement(370296..371252) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; xanthine dehydrogenase 371252 16978036 LY180_01805 Escherichia coli LY180 xanthine dehydrogenase YP_008563506.1 370296 R 1335916 CDS YP_008563507.1 544389144 16978037 complement(371249..371938) 1 NC_022364.1 iron-sulfur-binding subunit; with XdhA and XdhB participates in purine salvage; Derived by automated computational analysis using gene prediction method: Protein Homology.; xanthine dehydrogenase subunit C 371938 16978037 LY180_01810 Escherichia coli LY180 xanthine dehydrogenase subunit C YP_008563507.1 371249 R 1335916 CDS YP_008563508.1 544392842 16978038 372061..372309 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 372309 16978038 LY180_01815 Escherichia coli LY180 hypothetical protein YP_008563508.1 372061 D 1335916 CDS YP_008563509.1 544389145 16978039 complement(373216..373545) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 373545 16978039 LY180_01820 Escherichia coli LY180 hypothetical protein YP_008563509.1 373216 R 1335916 CDS YP_008563510.1 544389146 16978040 complement(373858..374568) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 374568 16978040 LY180_01825 Escherichia coli LY180 hypothetical protein YP_008563510.1 373858 R 1335916 CDS YP_008563511.1 544389147 16978041 complement(374537..376180) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 376180 16978041 LY180_01830 Escherichia coli LY180 hypothetical protein YP_008563511.1 374537 R 1335916 CDS YP_008563512.1 544389148 16978042 complement(376170..378695) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 378695 16978042 LY180_01835 Escherichia coli LY180 hypothetical protein YP_008563512.1 376170 R 1335916 CDS YP_008563513.1 544389149 16978043 complement(378721..379389) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 379389 16978043 LY180_01840 Escherichia coli LY180 hypothetical protein YP_008563513.1 378721 R 1335916 CDS YP_008563514.1 544389150 16978044 complement(379447..380034) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrillin MatB 380034 16978044 LY180_01845 Escherichia coli LY180 fimbrillin MatB YP_008563514.1 379447 R 1335916 CDS YP_008563515.1 544389151 16978045 complement(380109..380699) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LuxR family transcriptional regulator 380699 16978045 LY180_01850 Escherichia coli LY180 LuxR family transcriptional regulator YP_008563515.1 380109 R 1335916 CDS YP_008563516.1 544392843 16978046 381474..381701 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 381701 16978046 LY180_01855 Escherichia coli LY180 hypothetical protein YP_008563516.1 381474 D 1335916 CDS YP_008563517.1 544389152 16978047 complement(381736..381876) 1 NC_022364.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif; Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L36 381876 rpmJ 16978047 rpmJ Escherichia coli LY180 50S ribosomal protein L36 YP_008563517.1 381736 R 1335916 CDS YP_008563518.1 544389153 16978048 complement(381876..382139) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L31 382139 16978048 LY180_01865 Escherichia coli LY180 50S ribosomal protein L31 YP_008563518.1 381876 R 1335916 CDS YP_008563519.1 544392844 16978049 complement(382502..382603) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 382603 16978049 LY180_01870 Escherichia coli LY180 membrane protein YP_008563519.1 382502 R 1335916 CDS YP_008563520.1 544392845 16978050 complement(382728..382847) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 382847 16978050 LY180_01875 Escherichia coli LY180 hypothetical protein YP_008563520.1 382728 R 1335916 CDS YP_008563521.1 544389154 16978051 383719..387972 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; invasin 387972 16978051 LY180_01880 Escherichia coli LY180 invasin YP_008563521.1 383719 D 1335916 CDS YP_008563522.1 544389155 16978052 complement(388093..388950) 1 NC_022364.1 regulates genes involved in response to oxidative stress; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 388950 16978052 LY180_01885 Escherichia coli LY180 transcriptional regulator YP_008563522.1 388093 R 1335916 CDS YP_008563523.1 544389156 16978053 389199..390068 1 NC_022364.1 methylglyoxal reductase/beta-keto ester reductase; catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid; also catalyzes the reduction of methylglyoxal, ethyl-2-methylacetoacetate and ethyl-acetoacetate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2,5-diketo-D-gluconic acid reductase 390068 dkgA 16978053 dkgA Escherichia coli LY180 2,5-diketo-D-gluconic acid reductase YP_008563523.1 389199 D 1335916 CDS YP_008563524.1 544389157 16978054 complement(390228..390821) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 390821 16978054 LY180_01895 Escherichia coli LY180 membrane protein YP_008563524.1 390228 R 1335916 CDS YP_008563525.1 544389158 16978055 complement(390833..391069) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 391069 16978055 LY180_01900 Escherichia coli LY180 hypothetical protein YP_008563525.1 390833 R 1335916 CDS YP_008563526.1 544389159 16978056 complement(391178..392503) 1 NC_022364.1 Involved in disulfide oxidoreductase activity and electron transport; Derived by automated computational analysis using gene prediction method: Protein Homology.; pyridine nucleotide-disulfide oxidoreductase 392503 16978056 LY180_01905 Escherichia coli LY180 pyridine nucleotide-disulfide oxidoreductase YP_008563526.1 391178 R 1335916 CDS YP_008563527.1 544389160 16978057 392729..393583 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; AraC family transcriptional regulator 393583 16978057 LY180_01910 Escherichia coli LY180 AraC family transcriptional regulator YP_008563527.1 392729 D 1335916 CDS YP_008563528.1 544389161 16978058 394100..394819 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 394819 16978058 LY180_01915 Escherichia coli LY180 hypothetical protein YP_008563528.1 394100 D 1335916 CDS YP_008563529.1 544389162 16978059 394830..396257 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; amino acid dehydrogenase 396257 16978059 LY180_01920 Escherichia coli LY180 amino acid dehydrogenase YP_008563529.1 394830 D 1335916 CDS YP_008563530.1 544389163 16978060 396250..396945 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 396945 16978060 LY180_01925 Escherichia coli LY180 hypothetical protein YP_008563530.1 396250 D 1335916 CDS YP_008563531.1 544392846 16978061 complement(397188..397856) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 397856 16978061 LY180_01930 Escherichia coli LY180 membrane protein YP_008563531.1 397188 R 1335916 CDS YP_008563532.1 544389164 16978063 complement(399753..401225) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; betaine-aldehyde dehydrogenase 401225 16978063 LY180_01940 Escherichia coli LY180 betaine-aldehyde dehydrogenase YP_008563532.1 399753 R 1335916 CDS YP_008563533.1 544389165 16978064 complement(401239..401826) 1 NC_022364.1 HTH-type; bet1; Repressor involved in choline regulation of the bet genes; Derived by automated computational analysis using gene prediction method: Protein Homology.; BetI family transcriptional regulator 401826 16978064 LY180_01945 Escherichia coli LY180 BetI family transcriptional regulator YP_008563533.1 401239 R 1335916 CDS YP_008563534.1 544392847 16978065 401955..403988 1 NC_022364.1 proton-motive-force-driven choline transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; choline transporter BetT 403988 16978065 LY180_01950 Escherichia coli LY180 choline transporter BetT YP_008563534.1 401955 D 1335916 CDS YP_008563535.1 544389166 16978066 404495..408544 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 408544 16978066 LY180_01955 Escherichia coli LY180 hypothetical protein YP_008563535.1 404495 D 1335916 CDS YP_008563536.1 544389167 16978067 408686..409774 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cyclic di-GMP phosphodiesterase 409774 16978067 LY180_01960 Escherichia coli LY180 cyclic di-GMP phosphodiesterase YP_008563536.1 408686 D 1335916 CDS YP_008563537.1 544389168 16978068 complement(409816..410748) 1 NC_022364.1 activator of the allDC-ylbA operon involved in allantoin utilization; Derived by automated computational analysis using gene prediction method: Protein Homology.; LysR family transcriptional regulator 410748 16978068 LY180_01965 Escherichia coli LY180 LysR family transcriptional regulator YP_008563537.1 409816 R 1335916 CDS YP_008563538.1 544392848 16978069 complement(410840..411337) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 411337 16978069 LY180_01970 Escherichia coli LY180 membrane protein YP_008563538.1 410840 R 1335916 CDS YP_008563539.1 544389169 16978070 411595..412200 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ankyrin 412200 16978070 LY180_01975 Escherichia coli LY180 ankyrin YP_008563539.1 411595 D 1335916 CDS YP_008563540.1 544389170 16982295 413093..414640 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 414640 16982295 LY180_01980 Escherichia coli LY180 hypothetical protein YP_008563540.1 413093 D 1335916 CDS YP_008563541.1 544389171 16978072 414640..416058 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 416058 16978072 LY180_01985 Escherichia coli LY180 hypothetical protein YP_008563541.1 414640 D 1335916 CDS YP_008563542.1 544389172 16978073 416201..417151 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; carbamate kinase 417151 16978073 LY180_01990 Escherichia coli LY180 carbamate kinase YP_008563542.1 416201 D 1335916 CDS YP_008563543.1 544389173 16978074 417161..418543 1 NC_022364.1 metallo-dependent hydrolase superfamily; deaminase with metallo-dependent hydrolase domain; Derived by automated computational analysis using gene prediction method: Protein Homology.; deaminase 418543 16978074 LY180_01995 Escherichia coli LY180 deaminase YP_008563543.1 417161 D 1335916 CDS YP_008563544.1 544389174 16978075 418812..419252 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 419252 16978075 LY180_02000 Escherichia coli LY180 hypothetical protein YP_008563544.1 418812 D 1335916 CDS YP_008563545.1 544389175 16978076 419503..420489 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LacI family transcriptional regulator 420489 16978076 LY180_02005 Escherichia coli LY180 LacI family transcriptional regulator YP_008563545.1 419503 D 1335916 CDS YP_008563546.1 544392849 16978077 420538..422022 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; sugar ABC transporter ATP-binding protein 422022 16978077 LY180_02010 Escherichia coli LY180 sugar ABC transporter ATP-binding protein YP_008563546.1 420538 D 1335916 CDS YP_008563547.1 544389176 16978078 422015..422986 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar ABC transporter permease 422986 16978078 LY180_02015 Escherichia coli LY180 sugar ABC transporter permease YP_008563547.1 422015 D 1335916 CDS YP_008563548.1 544389177 16978079 422983..423939 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar ABC transporter permease 423939 16978079 LY180_02020 Escherichia coli LY180 sugar ABC transporter permease YP_008563548.1 422983 D 1335916 CDS YP_008563549.1 544389178 16978080 424026..425075 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; zinc-binding dehydrogenase 425075 16978080 LY180_02025 Escherichia coli LY180 zinc-binding dehydrogenase YP_008563549.1 424026 D 1335916 CDS YP_008563550.1 544392850 16982298 426546..426791 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 426791 16982298 LY180_02030 Escherichia coli LY180 hypothetical protein YP_008563550.1 426546 D 1335916 CDS YP_008563551.1 544389179 16978082 complement(426808..427455) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 427455 16978082 LY180_02035 Escherichia coli LY180 membrane protein YP_008563551.1 426808 R 1335916 CDS YP_008563552.1 544389180 16978083 427626..427901 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 427901 16978083 LY180_02040 Escherichia coli LY180 hypothetical protein YP_008563552.1 427626 D 1335916 CDS YP_008563553.1 544389181 16978084 complement(428002..429588) 1 NC_022364.1 sigma-54 dependent activator family protein; activates the prpBCDE operon; Derived by automated computational analysis using gene prediction method: Protein Homology.; propionate catabolism operon regulatory protein PrpR 429588 16978084 LY180_02045 Escherichia coli LY180 propionate catabolism operon regulatory protein PrpR YP_008563553.1 428002 R 1335916 CDS YP_008563554.1 544389182 16978085 429827..430717 1 NC_022364.1 catalyzes the formation of pyruvate and succinate from 2-methylisocitrate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-methylisocitrate lyase 430717 prpB 16978085 prpB Escherichia coli LY180 2-methylisocitrate lyase YP_008563554.1 429827 D 1335916 CDS YP_008563555.1 544389183 16978086 430762..431931 1 NC_022364.1 catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate; also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity; Derived by automated computational analysis using gene prediction method: Protein Homology.; methylcitrate synthase 431931 16978086 LY180_02055 Escherichia coli LY180 methylcitrate synthase YP_008563555.1 430762 D 1335916 CDS YP_008563556.1 544389184 16978087 431965..433416 1 NC_022364.1 functions in propionate metabolism; involved in isomerization of (2S,3S)-methylcitrate to (2R,3S)-methylisocitrate; also encodes minor aconitase or dehydratase activity; aconitase C; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-methylcitrate dehydratase 433416 prpD 16978087 prpD Escherichia coli LY180 2-methylcitrate dehydratase YP_008563556.1 431965 D 1335916 CDS YP_008563557.1 544389185 16978088 433456..435342 1 NC_022364.1 catalyzes the formation of propionyl-CoA using propionate as a substrate; PrpE from Ralstonia solanacearum can produce acetyl-, propionyl-, butyryl- and acrylyl-coenzyme A, and Salmonella enterica produces propionyl- and butyryl-coenzyme A; not expressed in Escherichia coli when grown on propionate/minimal media; ATP-dependent; Derived by automated computational analysis using gene prediction method: Protein Homology.; acetyl-CoA synthetase 435342 prpE 16978088 prpE Escherichia coli LY180 acetyl-CoA synthetase YP_008563557.1 433456 D 1335916 CDS YP_008563558.1 544389186 16978089 435579..436838 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cytosine permease 436838 codB 16978089 codB Escherichia coli LY180 cytosine permease YP_008563558.1 435579 D 1335916 CDS YP_008563559.1 544389187 16978090 436828..438111 1 NC_022364.1 Catalyzes the deamination of cytosine to uracil and ammonia; Derived by automated computational analysis using gene prediction method: Protein Homology.; cytosine deaminase 438111 16978090 LY180_02075 Escherichia coli LY180 cytosine deaminase YP_008563559.1 436828 D 1335916 CDS YP_008563560.1 544389188 16978091 complement(438151..439050) 1 NC_022364.1 controls the expression of the cynTSX operon involved in degrading and using cyanate as a sole nitrogen source; Derived by automated computational analysis using gene prediction method: Protein Homology.; MerR family transcriptional regulator 439050 16978091 LY180_02080 Escherichia coli LY180 MerR family transcriptional regulator YP_008563560.1 438151 R 1335916 CDS YP_008563561.1 544389189 16978092 439160..439819 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; carbonic anhydrase 439819 16978092 LY180_02085 Escherichia coli LY180 carbonic anhydrase YP_008563561.1 439160 D 1335916 CDS YP_008563562.1 544389190 16978093 439850..440320 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cyanate hydratase 440320 16978093 LY180_02090 Escherichia coli LY180 cyanate hydratase YP_008563562.1 439850 D 1335916 CDS YP_008563563.1 544389191 16978094 440353..441507 1 NC_022364.1 MFS transporter family member induced in the presence of cyanate as part of a 3 gene operon; not essential; Derived by automated computational analysis using gene prediction method: Protein Homology.; major facilitator transporter 441507 cynX 16978094 cynX Escherichia coli LY180 major facilitator transporter YP_008563563.1 440353 D 1335916 CDS YP_008563564.1 544389192 16978095 complement(441610..442170) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; maltose O-acetyltransferase 442170 16978095 LY180_02100 Escherichia coli LY180 maltose O-acetyltransferase YP_008563564.1 441610 R 1335916 CDS YP_008563565.1 544389193 16978096 complement(442287..443540) 1 NC_022364.1 lactose/proton symporter; mediates lactose/proton symport through the membrane by utilizing the proton gradient to drive transport of galactosides; member of major facilitator superfamily; functions as a monomer with 12 transmembrane segments; Derived by automated computational analysis using gene prediction method: Protein Homology.; galactoside permease 443540 lacY 16978096 lacY Escherichia coli LY180 galactoside permease YP_008563565.1 442287 R 1335916 CDS YP_008563566.1 544389194 16978097 complement(443592..446666) 1 NC_022364.1 forms a homotetramer; hydrolyzes lactose disaccharide to galactose and glucose; converts lactose to allolactose which is the natural inducer of the lac operon; Derived by automated computational analysis using gene prediction method: Protein Homology.; beta-D-galactosidase 446666 lacZ 16978097 lacZ Escherichia coli LY180 beta-D-galactosidase YP_008563566.1 443592 R 1335916 CDS YP_008563567.1 544389195 16978098 complement(446789..447871) 1 NC_022364.1 transcriptional repressor of lac operon; forms a homotetramer as a dimer of dimers; binds specific sites in lac operon resulting in DNA looping between the operators; binds allolactose as inducer; Derived by automated computational analysis using gene prediction method: Protein Homology.; lac repressor 447871 lacI 16978098 lacI Escherichia coli LY180 lac repressor YP_008563567.1 446789 R 1335916 CDS YP_008563568.1 544389196 16978099 complement(447948..448895) 1 NC_022364.1 activator of 3-phenylpropionic acid catabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 448895 16978099 LY180_02120 Escherichia coli LY180 transcriptional regulator YP_008563568.1 447948 R 1335916 CDS YP_008563569.1 544389197 16978100 448972..450636 1 NC_022364.1 catalyzes the formation of 3-(2,3-dihydroxyphenyl)propionate from 3-(3-hydroxyphenyl)propionate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-(3-hydroxyphenyl)propionate hydroxylase 450636 mhpA 16978100 mhpA Escherichia coli LY180 3-(3-hydroxyphenyl)propionate hydroxylase YP_008563569.1 448972 D 1335916 CDS YP_008563570.1 544389198 16978101 450638..451582 1 NC_022364.1 catalyzes the cleavage of 3-(2,3-dihydroxyphenyl) propionate into 2-hydroxy-6-oxonona-2,4-diene-1,9-dioate; part of the 3-phenylpropionic acid degradation pathway; member of the protocatechuate 4,5-dioxygenase family; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-(2,3-dihydroxyphenyl)propionate dioxygenase 451582 mhpB 16978101 mhpB Escherichia coli LY180 3-(2,3-dihydroxyphenyl)propionate dioxygenase YP_008563570.1 450638 D 1335916 CDS YP_008563571.1 544389199 16978102 451585..452466 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase 452466 16978102 LY180_02135 Escherichia coli LY180 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase YP_008563571.1 451585 D 1335916 CDS YP_008563572.1 544389200 16978103 452476..453285 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-keto-4-pentenoate hydratase 453285 16978103 LY180_02140 Escherichia coli LY180 2-keto-4-pentenoate hydratase YP_008563572.1 452476 D 1335916 CDS YP_008563573.1 544389201 16978104 453282..454232 1 NC_022364.1 catalyzes the formation of acetyl-CoA from acetalaldehyde; Derived by automated computational analysis using gene prediction method: Protein Homology.; acetaldehyde dehydrogenase 454232 16978104 LY180_02145 Escherichia coli LY180 acetaldehyde dehydrogenase YP_008563573.1 453282 D 1335916 CDS YP_008563574.1 544389202 16978105 454229..455242 1 NC_022364.1 catalyzes the formation of pyruvate and acetaldehyde from 4-hydroxy-2-ketovaleric acid; involved in the degradation of phenylpropionate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 4-hyroxy-2-oxovalerate aldolase 455242 16978105 LY180_02150 Escherichia coli LY180 4-hyroxy-2-oxovalerate aldolase YP_008563574.1 454229 D 1335916 CDS YP_008563575.1 544389203 16978106 455418..456629 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; MFS transporter 456629 16978106 LY180_02155 Escherichia coli LY180 MFS transporter YP_008563575.1 455418 D 1335916 CDS YP_008563576.1 544389204 16978107 456731..457270 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 457270 16978107 LY180_02160 Escherichia coli LY180 hypothetical protein YP_008563576.1 456731 D 1335916 CDS YP_008563577.1 544389205 16978108 complement(457496..458329) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; S-formylglutathione hydrolase 458329 16978108 LY180_02165 Escherichia coli LY180 S-formylglutathione hydrolase YP_008563577.1 457496 R 1335916 CDS YP_008563578.1 544389206 16978109 complement(458422..459531) 1 NC_022364.1 catalyzes the formation of S-formylglutathione from S-(hydroxymethyl)glutathione; also catalyzes the formation of aldehyde or ketone from alcohols; Derived by automated computational analysis using gene prediction method: Protein Homology.; S-(hydroxymethyl)glutathione dehydrogenase 459531 16978109 LY180_02170 Escherichia coli LY180 S-(hydroxymethyl)glutathione dehydrogenase YP_008563578.1 458422 R 1335916 CDS YP_008563579.1 544389207 16978110 complement(459566..459841) 1 NC_022364.1 DNA-binding; binds the RcnA promotor; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 459841 16978110 LY180_02175 Escherichia coli LY180 transcriptional regulator YP_008563579.1 459566 R 1335916 CDS YP_008563580.1 544389208 16978111 complement(460026..460799) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 460799 16978111 LY180_02180 Escherichia coli LY180 membrane protein YP_008563580.1 460026 R 1335916 CDS YP_008563581.1 544392851 16978112 complement(460801..461493) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; acetyltransferase 461493 16978112 LY180_02185 Escherichia coli LY180 acetyltransferase YP_008563581.1 460801 R 1335916 CDS YP_008563582.1 544392852 16978113 461570..461761 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 461761 16978113 LY180_02190 Escherichia coli LY180 hypothetical protein YP_008563582.1 461570 D 1335916 CDS YP_008563583.1 544392853 16978114 461902..463110 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 463110 16978114 LY180_02195 Escherichia coli LY180 hypothetical protein YP_008563583.1 461902 D 1335916 CDS YP_008563584.1 544389209 16978115 complement(463079..463894) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 463894 16978115 LY180_02200 Escherichia coli LY180 membrane protein YP_008563584.1 463079 R 1335916 CDS YP_008563585.1 544392854 16978116 complement(463904..464575) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 464575 16978116 LY180_02205 Escherichia coli LY180 hypothetical protein YP_008563585.1 463904 R 1335916 CDS YP_008563586.1 544389210 16978117 465191..466153 1 NC_022364.1 with TauB and TauC is responsible for taurine uptake; Derived by automated computational analysis using gene prediction method: Protein Homology.; taurine ABC transporter substrate-binding protein 466153 tauA 16978117 tauA Escherichia coli LY180 taurine ABC transporter substrate-binding protein YP_008563586.1 465191 D 1335916 CDS YP_008563587.1 544389211 16978118 466166..466933 1 NC_022364.1 part of the ABC type transport system SsuABC for aliphatic sulfonates; with SsuA being the periplasmic substrate-binding subunit, SsuB the ATP-binding subunit and SsuC the permease; Derived by automated computational analysis using gene prediction method: Protein Homology.; aliphatic sulfonate ABC transporter ATP-binding protein 466933 ssuB 16978118 ssuB Escherichia coli LY180 aliphatic sulfonate ABC transporter ATP-binding protein YP_008563587.1 466166 D 1335916 CDS YP_008563588.1 544389212 16978119 466930..467757 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; taurine ABC transporter permease 467757 16978119 LY180_02220 Escherichia coli LY180 taurine ABC transporter permease YP_008563588.1 466930 D 1335916 CDS YP_008563589.1 544389213 16978120 467754..468605 1 NC_022364.1 catalyzes the conversion of taurine (2-aminoethanesulfonate) to sulfite and aminoacetaldehyde concurrently with the conversion of alpha-ketoglutarate to succinate and carbon dioxide; non-heme iron oxidase; allows the use of taurine as an alternative sulfur source; forms homodimers; Derived by automated computational analysis using gene prediction method: Protein Homology.; taurine dioxygenase 468605 tauD 16978120 tauD Escherichia coli LY180 taurine dioxygenase YP_008563589.1 467754 D 1335916 CDS YP_008563590.1 544389214 16978121 complement(468712..469686) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; delta-aminolevulinic acid dehydratase 469686 16978121 LY180_02230 Escherichia coli LY180 delta-aminolevulinic acid dehydratase YP_008563590.1 468712 R 1335916 CDS YP_008563591.1 544392855 16978122 complement(470263..471471) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 471471 16978122 LY180_02235 Escherichia coli LY180 hypothetical protein YP_008563591.1 470263 R 1335916 CDS YP_008563592.1 544389215 16978123 471544..472836 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; alkaline phosphatase 472836 16978123 LY180_02240 Escherichia coli LY180 alkaline phosphatase YP_008563592.1 471544 D 1335916 CDS YP_008563593.1 544389216 16978124 472955..473275 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 473275 16978124 LY180_02245 Escherichia coli LY180 hypothetical protein YP_008563593.1 472955 D 1335916 CDS YP_008563594.1 544389217 16978125 473377..474492 1 NC_022364.1 catalyzes the conversion of 2 GTP into c-di-GMP; adrA overexpression induces cellulose biosynthesis, cell adherence to abiotic surfaces and swimming and swarming motility; AdrA acts post-transcriptionally on the bcsABZC operon activating cellulose biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; diguanylate cyclase 474492 adrA 16978125 adrA Escherichia coli LY180 diguanylate cyclase YP_008563594.1 473377 D 1335916 CDS YP_008563595.1 544389218 16978126 complement(474509..475318) 1 NC_022364.1 catalyzes the formation of L-proline from pyrroline-5-carboxylate; Derived by automated computational analysis using gene prediction method: Protein Homology.; pyrroline-5-carboxylate reductase 475318 16978126 LY180_02255 Escherichia coli LY180 pyrroline-5-carboxylate reductase YP_008563595.1 474509 R 1335916 CDS YP_008563596.1 544389219 16978127 475438..475896 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 475896 16978127 LY180_02260 Escherichia coli LY180 hypothetical protein YP_008563596.1 475438 D 1335916 CDS YP_008563597.1 544389220 16978128 476079..476603 1 NC_022364.1 type II enzyme similar to type I but differentially regulated and with a lower Km; catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; shikimate kinase 476603 aroL 16978128 aroL Escherichia coli LY180 shikimate kinase YP_008563597.1 476079 D 1335916 CDS YP_008563598.1 544389221 16978129 476653..476844 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 476844 16978129 LY180_02270 Escherichia coli LY180 hypothetical protein YP_008563598.1 476653 D 1335916 CDS YP_008563599.1 544389222 16978130 477102..477779 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 477779 16978130 LY180_02275 Escherichia coli LY180 hypothetical protein YP_008563599.1 477102 D 1335916 CDS YP_008563600.1 544389223 16978131 477851..478135 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 478135 16978131 LY180_02280 Escherichia coli LY180 hypothetical protein YP_008563600.1 477851 D 1335916 CDS YP_008563601.1 544392856 16978132 478451..478624 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 478624 16978132 LY180_02285 Escherichia coli LY180 hypothetical protein YP_008563601.1 478451 D 1335916 CDS YP_008563602.1 544389224 16978133 complement(478782..479759) 1 NC_022364.1 Required for efficient pilin antigenic variation; Derived by automated computational analysis using gene prediction method: Protein Homology.; recombinase 479759 rdgC 16978133 rdgC Escherichia coli LY180 recombinase YP_008563602.1 478782 R 1335916 CDS YP_008563603.1 544389225 16978134 479818..480726 1 NC_022364.1 catalyzes phosphorylation of fructose; cytosolic enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.; fructokinase 480726 16978134 LY180_02300 Escherichia coli LY180 fructokinase YP_008563603.1 479818 D 1335916 CDS YP_008563604.1 544389226 16978135 complement(480869..482137) 1 NC_022364.1 member of the major facilitator superfamily (MFS) of transporters; unknown function; may be associated with transport or processing of arabinose polymers; Derived by automated computational analysis using gene prediction method: Protein Homology.; MFS transporter 482137 16978135 LY180_02305 Escherichia coli LY180 MFS transporter YP_008563604.1 480869 R 1335916 CDS YP_008563605.1 544389227 16978136 complement(482179..485322) 1 NC_022364.1 with SbcD cleaves DNA hairpin structures; also has 5' single-strand endonuclease activity; Derived by automated computational analysis using gene prediction method: Protein Homology.; exonuclease subunit SbcC 485322 16978136 LY180_02310 Escherichia coli LY180 exonuclease subunit SbcC YP_008563605.1 482179 R 1335916 CDS YP_008563606.1 544389228 16978137 complement(485319..486521) 1 NC_022364.1 with SbcC cleaves DNA hairpin structure, also has 5' single-strand endonuclease activity; Derived by automated computational analysis using gene prediction method: Protein Homology.; exonuclease subunit SbcD 486521 16978137 LY180_02315 Escherichia coli LY180 exonuclease subunit SbcD YP_008563606.1 485319 R 1335916 CDS YP_008563607.1 544389229 16978138 486711..487400 1 NC_022364.1 two component response regulator for the phosphate regulon; PhoR phosphorylates PhoB; Derived by automated computational analysis using gene prediction method: Protein Homology.; PhoB family transcriptional regulator 487400 16978138 LY180_02320 Escherichia coli LY180 PhoB family transcriptional regulator YP_008563607.1 486711 D 1335916 CDS YP_008563608.1 544389230 16978139 487458..488753 1 NC_022364.1 membrane-associated histidine protein kinase that phosphorylates phoB in response to environmental signals as part of the two-component phosphate regulatory system phoR/phoB; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphate regulon sensor protein 488753 phoR 16978139 phoR Escherichia coli LY180 phosphate regulon sensor protein YP_008563608.1 487458 D 1335916 CDS YP_008563609.1 544389231 16978140 489160..490479 1 NC_022364.1 sodium:branched-chain amino acid symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.; branched-chain amino acid transporter 2 carrier protein BrnQ 490479 16978140 LY180_02330 Escherichia coli LY180 branched-chain amino acid transporter 2 carrier protein BrnQ YP_008563609.1 489160 D 1335916 CDS YP_008563610.1 544389232 16978141 490555..491928 1 NC_022364.1 cryptic permease that may be involved in the transport of proline across the inner membrane; in Salmonella typhimurium, the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation; Derived by automated computational analysis using gene prediction method: Protein Homology.; permease 491928 proY 16978141 proY Escherichia coli LY180 permease YP_008563610.1 490555 D 1335916 CDS YP_008563611.1 544389233 16978142 492087..493901 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; maltodextrin glucosidase 493901 16978142 LY180_02340 Escherichia coli LY180 maltodextrin glucosidase YP_008563611.1 492087 D 1335916 CDS YP_008563612.1 544389234 16978143 complement(493906..494487) 1 NC_022364.1 Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP; Derived by automated computational analysis using gene prediction method: Protein Homology.; ACP phosphodiesterase 494487 16978143 LY180_02345 Escherichia coli LY180 ACP phosphodiesterase YP_008563612.1 493906 R 1335916 CDS YP_008563613.1 544389235 16978144 494580..495650 1 NC_022364.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; Derived by automated computational analysis using gene prediction method: Protein Homology.; S-adenosylmethionine tRNA ribosyltransferase 495650 queA 16978144 queA Escherichia coli LY180 S-adenosylmethionine tRNA ribosyltransferase YP_008563613.1 494580 D 1335916 CDS YP_008563614.1 544389236 16978145 495706..496833 1 NC_022364.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); Derived by automated computational analysis using gene prediction method: Protein Homology.; queuine tRNA-ribosyltransferase 496833 tgt 16978145 tgt Escherichia coli LY180 queuine tRNA-ribosyltransferase YP_008563614.1 495706 D 1335916 CDS YP_008563615.1 544389237 16978146 496856..497188 1 NC_022364.1 member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; Derived by automated computational analysis using gene prediction method: Protein Homology.; preprotein translocase subunit YajC 497188 yajC 16978146 yajC Escherichia coli LY180 preprotein translocase subunit YajC YP_008563615.1 496856 D 1335916 CDS YP_008563616.1 544389238 16978147 497216..499063 1 NC_022364.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; preprotein translocase subunit SecD 499063 secD 16978147 secD Escherichia coli LY180 preprotein translocase subunit SecD YP_008563616.1 497216 D 1335916 CDS YP_008563617.1 544389239 16978148 499074..500045 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; preprotein translocase subunit SecF 500045 16978148 LY180_02370 Escherichia coli LY180 preprotein translocase subunit SecF YP_008563617.1 499074 D 1335916 CDS YP_008563618.1 544389240 16978149 500174..500521 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 500521 16978149 LY180_02375 Escherichia coli LY180 hypothetical protein YP_008563618.1 500174 D 1335916 CDS YP_008563619.1 544389241 16978151 complement(500698..501582) 1 NC_022364.1 receptor of phage T6 and colicin K; involved in the transfer of deoxyribo- and ribo-nucleotides across the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; ion channel protein Tsx 501582 16978151 LY180_02385 Escherichia coli LY180 ion channel protein Tsx YP_008563619.1 500698 R 1335916 CDS YP_008563620.1 544389242 16978152 complement(501881..502420) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 502420 16978152 LY180_02390 Escherichia coli LY180 hypothetical protein YP_008563620.1 501881 R 1335916 CDS YP_008563621.1 544389243 16978153 502571..503020 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; NrdR family transcriptional regulator 503020 16978153 LY180_02395 Escherichia coli LY180 NrdR family transcriptional regulator YP_008563621.1 502571 D 1335916 CDS YP_008563622.1 544389244 16978154 503024..504127 1 NC_022364.1 riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway; catalyzes the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 5-amino-6-(5-phosphoribitylamino)uracil; Derived by automated computational analysis using gene prediction method: Protein Homology.; diaminohydroxyphosphoribosylaminopyrimidine deaminase 504127 ribD 16978154 ribD Escherichia coli LY180 diaminohydroxyphosphoribosylaminopyrimidine deaminase YP_008563622.1 503024 D 1335916 CDS YP_008563623.1 544389245 16978155 504216..504686 1 NC_022364.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; Derived by automated computational analysis using gene prediction method: Protein Homology.; 6,7-dimethyl-8-ribityllumazine synthase 504686 ribH 16978155 ribH Escherichia coli LY180 6,7-dimethyl-8-ribityllumazine synthase YP_008563623.1 504216 D 1335916 CDS YP_008563624.1 544389246 16978156 504706..505125 1 NC_022364.1 Regulates rRNA biosynthesis by transcriptional antitermination; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcription antitermination protein NusB 505125 nusB 16978156 nusB Escherichia coli LY180 transcription antitermination protein NusB YP_008563624.1 504706 D 1335916 CDS YP_008563625.1 544389247 16978157 505203..506180 1 NC_022364.1 catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP; Derived by automated computational analysis using gene prediction method: Protein Homology.; thiamine monophosphate kinase 506180 16978157 LY180_02415 Escherichia coli LY180 thiamine monophosphate kinase YP_008563625.1 505203 D 1335916 CDS YP_008563626.1 544389248 16978158 506158..506676 1 NC_022364.1 hydrolyzes phosphatidylglycerophosphate to produce phosphatidylglycerol and phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphatidylglycerophosphatase A 506676 16978158 LY180_02420 Escherichia coli LY180 phosphatidylglycerophosphatase A YP_008563626.1 506158 D 1335916 CDS YP_008563627.1 544389249 16978159 complement(506730..507704) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase 507704 16978159 LY180_02425 Escherichia coli LY180 oxidoreductase YP_008563627.1 506730 R 1335916 CDS YP_008563628.1 544389250 16978160 complement(507884..509746) 1 NC_022364.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 1-deoxy-D-xylulose-5-phosphate synthase 509746 16978160 LY180_02430 Escherichia coli LY180 1-deoxy-D-xylulose-5-phosphate synthase YP_008563628.1 507884 R 1335916 CDS YP_008563629.1 544389251 16978161 complement(509771..510670) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; geranyltranstransferase 510670 16978161 LY180_02435 Escherichia coli LY180 geranyltranstransferase YP_008563629.1 509771 R 1335916 CDS YP_008563630.1 544389252 16978162 complement(510670..510912) 1 NC_022364.1 catalyzes the bidirectional exonucleolytic cleavage of DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; exodeoxyribonuclease VII small subunit 510912 16978162 LY180_02440 Escherichia coli LY180 exodeoxyribonuclease VII small subunit YP_008563630.1 510670 R 1335916 CDS YP_008563631.1 544389253 16978163 511118..512566 1 NC_022364.1 catalyzes the conversion of uridine to 4-thiouridinine tRNA; also required for the synthesis of the thiazole moiety; Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA s(4)U8 sulfurtransferase 512566 16978163 LY180_02445 Escherichia coli LY180 tRNA s(4)U8 sulfurtransferase YP_008563631.1 511118 D 1335916 CDS YP_008563632.1 544389254 16978164 complement(512620..513210) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidative-stress-resistance chaperone 513210 16978164 LY180_02450 Escherichia coli LY180 oxidative-stress-resistance chaperone YP_008563632.1 512620 R 1335916 CDS YP_008563633.1 544389255 16978165 complement(513173..514084) 1 NC_022364.1 ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-dehydropantoate 2-reductase 514084 16978165 LY180_02455 Escherichia coli LY180 2-dehydropantoate 2-reductase YP_008563633.1 513173 R 1335916 CDS YP_008563634.1 544389256 16978166 514252..514743 1 NC_022364.1 nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; Derived by automated computational analysis using gene prediction method: Protein Homology.; nucleotide-binding protein 514743 16978166 LY180_02460 Escherichia coli LY180 nucleotide-binding protein YP_008563634.1 514252 D 1335916 CDS YP_008563635.1 544389257 16978167 complement(514871..516235) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 516235 16978167 LY180_02465 Escherichia coli LY180 membrane protein YP_008563635.1 514871 R 1335916 CDS YP_008563636.1 544392857 16978168 complement(517623..518165) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; acetyltransferase 518165 16978168 LY180_02470 Escherichia coli LY180 acetyltransferase YP_008563636.1 517623 R 1335916 CDS YP_008563637.1 544392858 16978169 complement(518149..518460) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 518460 16978169 LY180_02475 Escherichia coli LY180 hypothetical protein YP_008563637.1 518149 R 1335916 CDS YP_008563638.1 544389258 16978170 complement(518645..519535) 1 NC_022364.1 converts protoheme IX and farnesyl diphosphate to heme O; Derived by automated computational analysis using gene prediction method: Protein Homology.; protoheme IX farnesyltransferase 519535 16978170 LY180_02480 Escherichia coli LY180 protoheme IX farnesyltransferase YP_008563638.1 518645 R 1335916 CDS YP_008563639.1 544389259 16978171 complement(519547..519876) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cytochrome O ubiquinol oxidase 519876 16978171 LY180_02485 Escherichia coli LY180 cytochrome O ubiquinol oxidase YP_008563639.1 519547 R 1335916 CDS YP_008563640.1 544389260 16978172 complement(519876..520490) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cytochrome O ubiquinol oxidase 520490 16978172 LY180_02490 Escherichia coli LY180 cytochrome O ubiquinol oxidase YP_008563640.1 519876 R 1335916 CDS YP_008563641.1 544389261 16978173 complement(520480..522471) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cytochrome O ubiquinol oxidase 522471 16978173 LY180_02495 Escherichia coli LY180 cytochrome O ubiquinol oxidase YP_008563641.1 520480 R 1335916 CDS YP_008563642.1 544389262 16978174 complement(522493..523440) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cytochrome O ubiquinol oxidase 523440 16978174 LY180_02500 Escherichia coli LY180 cytochrome O ubiquinol oxidase YP_008563642.1 522493 R 1335916 CDS YP_008563643.1 544389263 16978175 complement(523900..525375) 1 NC_022364.1 in Escherichia coli this protein is a permease involved in peptidoglycan recycling; member of major facilitator superfamily; MFS; inner membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; muropeptide transporter 525375 ampG 16978175 ampG Escherichia coli LY180 muropeptide transporter YP_008563643.1 523900 R 1335916 CDS YP_008563644.1 544389264 16978176 complement(525419..525997) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 525997 16978176 LY180_02510 Escherichia coli LY180 hypothetical protein YP_008563644.1 525419 R 1335916 CDS YP_008563645.1 544389265 16978177 526302..526619 1 NC_022364.1 positive transcriptional regulator of morphogenetic pathway; controlling several genes involved in oxidative stress, acid stress, heat shock, osmotic shock, and carbon-starvation stress; Derived by automated computational analysis using gene prediction method: Protein Homology.; BolA family transcriptional regulator 526619 16978177 LY180_02515 Escherichia coli LY180 BolA family transcriptional regulator YP_008563645.1 526302 D 1335916 CDS YP_008563646.1 544392859 16978178 526628..526816 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 526816 16978178 LY180_02520 Escherichia coli LY180 hypothetical protein YP_008563646.1 526628 D 1335916 CDS YP_008563647.1 544389266 16978179 526963..528261 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; trigger factor 528261 16978179 LY180_02525 Escherichia coli LY180 trigger factor YP_008563647.1 526963 D 1335916 CDS YP_008563648.1 544389267 16978180 528507..529130 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Clp protease proteolytic subunit ClpP 529130 16978180 LY180_02530 Escherichia coli LY180 Clp protease proteolytic subunit ClpP YP_008563648.1 528507 D 1335916 CDS YP_008563649.1 544389268 16978181 529256..530530 1 NC_022364.1 binds and unfolds substrates as part of the ClpXP protease; Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-dependent protease 530530 clpX 16978181 clpX Escherichia coli LY180 ATP-dependent protease YP_008563649.1 529256 D 1335916 CDS YP_008563650.1 544389269 16978182 530718..533072 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidase 533072 16978182 LY180_02540 Escherichia coli LY180 peptidase YP_008563650.1 530718 D 1335916 CDS YP_008563651.1 544389270 16978183 533281..533553 1 NC_022364.1 histone-like DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 533553 16978183 LY180_02545 Escherichia coli LY180 transcriptional regulator YP_008563651.1 533281 D 1335916 CDS YP_008563652.1 544389271 16978184 533745..535616 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; folding chaperone 535616 16978184 LY180_02550 Escherichia coli LY180 folding chaperone YP_008563652.1 533745 D 1335916 CDS YP_008563653.1 544389272 16978185 535767..536138 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 536138 16978185 LY180_02555 Escherichia coli LY180 hypothetical protein YP_008563653.1 535767 D 1335916 CDS YP_008563654.1 544389273 16978186 536232..536630 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; thioesterase 536630 16978186 LY180_02560 Escherichia coli LY180 thioesterase YP_008563654.1 536232 D 1335916 CDS YP_008563655.1 544389274 16978187 complement(536682..537377) 1 NC_022364.1 YbaX; catalyzes the transformation of GTP to 7-cyano-7-deazaguanine (preQ0), as one of the early reactions of quenosine biosynthesis; quenosine is a modified nucleoside that occurs at the wobble position of GUN anticodons in tRNAs for Asn, Asp, Tyr, and His; Derived by automated computational analysis using gene prediction method: Protein Homology.; queuosine biosynthesis protein QueC 537377 16978187 LY180_02565 Escherichia coli LY180 queuosine biosynthesis protein QueC YP_008563655.1 536682 R 1335916 CDS YP_008563656.1 544389275 16978188 complement(537442..539142) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 539142 16978188 LY180_02570 Escherichia coli LY180 hypothetical protein YP_008563656.1 537442 R 1335916 CDS YP_008563657.1 544389276 16978189 539242..540060 1 NC_022364.1 HMP-PP phosphatase; catalyzes the hydrolysis of 4-amino-2-methyl-5-hydroxymethylpyrimidine pyrophosphate (HMP-PP) to 4-amino-2-methyl-5-hydroxymethylpyrimidine phosphate (HMP-P); Derived by automated computational analysis using gene prediction method: Protein Homology.; thiamin pyrimidine pyrophosphate hydrolase 540060 16978189 LY180_02575 Escherichia coli LY180 thiamin pyrimidine pyrophosphate hydrolase YP_008563657.1 539242 D 1335916 CDS YP_008563658.1 544389277 16978190 540213..540671 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 540671 16978190 LY180_02580 Escherichia coli LY180 transcriptional regulator YP_008563658.1 540213 D 1335916 CDS YP_008563659.1 544389278 16978191 540701..542473 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug ABC transporter ATP-binding protein 542473 16978191 LY180_02585 Escherichia coli LY180 multidrug ABC transporter ATP-binding protein YP_008563659.1 540701 D 1335916 CDS YP_008563660.1 544389279 16978192 542466..544247 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug ABC transporter ATP-binding protein 544247 16978192 LY180_02590 Escherichia coli LY180 multidrug ABC transporter ATP-binding protein YP_008563660.1 542466 D 1335916 CDS YP_008563661.1 544389280 16978193 544428..544766 1 NC_022364.1 indirectly regulates nitrogen metabolism; at high nitrogen levels P-II 2 prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II 2 is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA; functionally it is equivalent to protein P-II (GlnB), but itsexpression is driven by the presence of uridylyltransferase, nitrogen regulator I, and the absence of ammonia; Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrogen regulatory protein P-II 2 544766 16978193 LY180_02595 Escherichia coli LY180 nitrogen regulatory protein P-II 2 YP_008563661.1 544428 D 1335916 CDS YP_008563662.1 544389281 16978194 544796..546082 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ammonium transporter 546082 16978194 LY180_02600 Escherichia coli LY180 ammonium transporter YP_008563662.1 544796 D 1335916 CDS YP_008563663.1 544389282 16978195 complement(546130..546990) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acyl-CoA thioesterase 546990 16978195 LY180_02605 Escherichia coli LY180 acyl-CoA thioesterase YP_008563663.1 546130 R 1335916 CDS YP_008563664.1 544389283 16978196 547208..547780 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 547780 16978196 LY180_02610 Escherichia coli LY180 hypothetical protein YP_008563664.1 547208 D 1335916 CDS YP_008563665.1 544392860 16978197 complement(547811..548122) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 548122 16978197 LY180_02615 Escherichia coli LY180 hypothetical protein YP_008563665.1 547811 R 1335916 CDS YP_008563666.1 544389284 16978198 548501..548854 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 548854 16978198 LY180_02620 Escherichia coli LY180 hypothetical protein YP_008563666.1 548501 D 1335916 CDS YP_008563667.1 544389285 16978200 complement(550610..551080) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 551080 16978200 LY180_02630 Escherichia coli LY180 membrane protein YP_008563667.1 550610 R 1335916 CDS YP_008563668.1 544389286 16978201 complement(551196..551747) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; maltose O-acetyltransferase 551747 16978201 LY180_02635 Escherichia coli LY180 maltose O-acetyltransferase YP_008563668.1 551196 R 1335916 CDS YP_008563669.1 544389287 16978202 complement(551919..552137) 1 NC_022364.1 with Hns involved in transcriptional regulation of hemolysin; non-specific DNA-binding protein which affects the production of multiple proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; gene expression modulator 552137 16978202 LY180_02640 Escherichia coli LY180 gene expression modulator YP_008563669.1 551919 R 1335916 CDS YP_008563670.1 544389288 16978203 complement(552163..552537) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Hha toxicity attenuator 552537 16978203 LY180_02645 Escherichia coli LY180 Hha toxicity attenuator YP_008563670.1 552163 R 1335916 CDS YP_008563671.1 544389289 16978204 complement(553083..556232) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug transporter 556232 16978204 LY180_02650 Escherichia coli LY180 multidrug transporter YP_008563671.1 553083 R 1335916 CDS YP_008563672.1 544389290 16978205 complement(556255..557448) 1 NC_022364.1 with AcrD and TolC forms a transport system involved in resistance to a number of compounds including lipophilic antibiotics; Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug transporter 557448 16978205 LY180_02655 Escherichia coli LY180 multidrug transporter YP_008563672.1 556255 R 1335916 CDS YP_008563673.1 544389291 16978206 557590..558237 1 NC_022364.1 regulates the acrAB operon which is involved in susceptibility to dephalothin and cephaloridine; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 558237 16978206 LY180_02660 Escherichia coli LY180 transcriptional regulator YP_008563673.1 557590 D 1335916 CDS YP_008563674.1 544389292 16978207 558365..561727 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 561727 16978207 LY180_02665 Escherichia coli LY180 hypothetical protein YP_008563674.1 558365 D 1335916 CDS YP_008563675.1 544389293 16978208 complement(561939..562100) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 562100 16978208 LY180_02670 Escherichia coli LY180 hypothetical protein YP_008563675.1 561939 R 1335916 CDS YP_008563676.1 544389294 16978209 complement(562114..562641) 1 NC_022364.1 PriC; protein involved in DNA replication; part of the primosome, a protein complex required to restart stalled replication forks; binds the complex formed by PriA, PriB and DNA; PriC-dependent primosome requires a gap to restart DNA replication; stimulates Rep activity at stalled forks; Derived by automated computational analysis using gene prediction method: Protein Homology.; primosomal replication protein N'' 562641 16978209 LY180_02675 Escherichia coli LY180 primosomal replication protein N'' YP_008563676.1 562114 R 1335916 CDS YP_008563677.1 544389295 16978210 562711..563088 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 563088 16978210 LY180_02680 Escherichia coli LY180 membrane protein YP_008563677.1 562711 D 1335916 CDS YP_008563678.1 544389296 16978211 563241..563792 1 NC_022364.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; adenine phosphoribosyltransferase 563792 16978211 LY180_02685 Escherichia coli LY180 adenine phosphoribosyltransferase YP_008563678.1 563241 D 1335916 CDS YP_008563679.1 544389297 16978212 563921..565852 1 NC_022364.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA polymerase III subunits gamma and tau 565852 16978212 LY180_02690 Escherichia coli LY180 DNA polymerase III subunits gamma and tau YP_008563679.1 563921 D 1335916 CDS YP_008563680.1 544389298 16978213 565905..566234 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 566234 16978213 LY180_02695 Escherichia coli LY180 hypothetical protein YP_008563680.1 565905 D 1335916 CDS YP_008563681.1 544389299 16978214 566234..566839 1 NC_022364.1 involved in a recombinational process of DNA repair, independent of the recBC complex; Derived by automated computational analysis using gene prediction method: Protein Homology.; recombinase RecR 566839 recR 16978214 recR Escherichia coli LY180 recombinase RecR YP_008563681.1 566234 D 1335916 CDS YP_008563682.1 544389300 16978215 566949..568823 1 NC_022364.1 molecular chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.; heat shock protein 90 568823 16978215 LY180_02705 Escherichia coli LY180 heat shock protein 90 YP_008563682.1 566949 D 1335916 CDS YP_008563683.1 544389301 16978216 569004..569648 1 NC_022364.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; Derived by automated computational analysis using gene prediction method: Protein Homology.; adenylate kinase 569648 adk 16978216 adk Escherichia coli LY180 adenylate kinase YP_008563683.1 569004 D 1335916 CDS YP_008563684.1 544389302 16978217 569884..570846 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ferrochelatase 570846 16978217 LY180_02715 Escherichia coli LY180 ferrochelatase YP_008563684.1 569884 D 1335916 CDS YP_008563685.1 544389303 16978218 complement(570843..571802) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acetyl esterase 571802 16978218 LY180_02720 Escherichia coli LY180 acetyl esterase YP_008563685.1 570843 R 1335916 CDS YP_008563686.1 544389304 16978219 571954..573258 1 NC_022364.1 catalyzes the formation of inosine/guanosine monophosphate from inosine or guanosine and ATP; Derived by automated computational analysis using gene prediction method: Protein Homology.; inosine/guanosine kinase 573258 16978219 LY180_02725 Escherichia coli LY180 inosine/guanosine kinase YP_008563686.1 571954 D 1335916 CDS YP_008563687.1 544389305 16978220 complement(573391..575067) 1 NC_022364.1 YbaL; member of the CPA-2 family of antiporters; uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; cation:proton antiport protein 575067 16978220 LY180_02730 Escherichia coli LY180 cation:proton antiport protein YP_008563687.1 573391 R 1335916 CDS YP_008563688.1 544389306 16978221 complement(575305..576525) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Fosmidomycin resistance protein 576525 16978221 LY180_02735 Escherichia coli LY180 Fosmidomycin resistance protein YP_008563688.1 575305 R 1335916 CDS YP_008563689.1 544389307 16978222 576743..578395 1 NC_022364.1 catalyzes the degradation of periplasmic UDP-glucose to uridine, glucose-1-phosphate and inorganic phosphate; specific for uridine nucleotides; Derived by automated computational analysis using gene prediction method: Protein Homology.; 5'-nucleotidase 578395 ushA 16978222 ushA Escherichia coli LY180 5'-nucleotidase YP_008563689.1 576743 D 1335916 CDS YP_008563690.1 544389308 16978223 complement(578432..578911) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 578911 16978223 LY180_02745 Escherichia coli LY180 hypothetical protein YP_008563690.1 578432 R 1335916 CDS YP_008563691.1 544389309 16978224 complement(579115..579909) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 579909 16978224 LY180_02750 Escherichia coli LY180 hypothetical protein YP_008563691.1 579115 R 1335916 CDS YP_008563692.1 544389310 16978225 579993..580388 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; XRE family transcriptional regulator 580388 16978225 LY180_02755 Escherichia coli LY180 XRE family transcriptional regulator YP_008563692.1 579993 D 1335916 CDS YP_008563693.1 544389311 16978226 complement(580502..583006) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; copper exporting ATPase 583006 copA 16978226 copA Escherichia coli LY180 copper exporting ATPase YP_008563693.1 580502 R 1335916 CDS YP_008563694.1 544389312 16978227 583268..584200 1 NC_022364.1 catalyzes the formation of glutamate from glutamine; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutaminase 584200 16978227 LY180_02765 Escherichia coli LY180 glutaminase YP_008563694.1 583268 D 1335916 CDS YP_008563695.1 544389313 16978228 584203..585495 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; amino acid permease 585495 16978228 LY180_02770 Escherichia coli LY180 amino acid permease YP_008563695.1 584203 D 1335916 CDS YP_008563696.1 544389314 16978229 585620..586027 1 NC_022364.1 activator of copper-responsive regulon genes; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 586027 16978229 LY180_02775 Escherichia coli LY180 transcriptional regulator YP_008563696.1 585620 D 1335916 CDS YP_008563697.1 544389315 16978230 complement(586028..586486) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 586486 16978230 LY180_02780 Escherichia coli LY180 membrane protein YP_008563697.1 586028 R 1335916 CDS YP_008563698.1 544389316 16978231 complement(586483..587400) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; protease 587400 16978231 LY180_02785 Escherichia coli LY180 protease YP_008563698.1 586483 R 1335916 CDS YP_008563699.1 544392861 16978232 587546..588223 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; putrescine/spermidine ABC transporter ATP-binding protein 588223 16978232 LY180_02790 Escherichia coli LY180 putrescine/spermidine ABC transporter ATP-binding protein YP_008563699.1 587546 D 1335916 CDS YP_008563700.1 544389317 16978233 588210..588989 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 588989 16978233 LY180_02795 Escherichia coli LY180 membrane protein YP_008563700.1 588210 D 1335916 CDS YP_008563701.1 544389318 16978234 complement(589052..589906) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 589906 16978234 LY180_02800 Escherichia coli LY180 hypothetical protein YP_008563701.1 589052 R 1335916 CDS YP_008563702.1 544389319 16978235 complement(589967..590776) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase 590776 16978235 LY180_02805 Escherichia coli LY180 oxidoreductase YP_008563702.1 589967 R 1335916 CDS YP_008563703.1 544389320 16978236 complement(590766..591392) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 591392 16978236 LY180_02810 Escherichia coli LY180 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 YP_008563703.1 590766 R 1335916 CDS YP_008563704.1 544389321 16978237 591360..592046 1 NC_022364.1 ATP-binding protein of an ATP-binding cassette transporter; when bound to FtsX, FtsEX localizes to the cell division site and plays a role in the assembly or stability of the septal ring under low-salt growth conditions; Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division protein FtsE 592046 16978237 LY180_02815 Escherichia coli LY180 cell division protein FtsE YP_008563704.1 591360 D 1335916 CDS YP_008563705.1 544389322 16978238 592043..594457 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar ABC transporter permease 594457 16978238 LY180_02820 Escherichia coli LY180 sugar ABC transporter permease YP_008563705.1 592043 D 1335916 CDS YP_008563706.1 544392862 16978239 594887..599176 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; rhsA 599176 16978239 LY180_02825 Escherichia coli LY180 rhsA YP_008563706.1 594887 D 1335916 CDS YP_008563707.1 544389323 16978240 599216..599584 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 599584 16978240 LY180_02830 Escherichia coli LY180 hypothetical protein YP_008563707.1 599216 D 1335916 CDS YP_008563708.1 544392863 16978241 599584..600294 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 600294 16978241 LY180_02835 Escherichia coli LY180 hypothetical protein YP_008563708.1 599584 D 1335916 CDS YP_008563709.1 544392864 16978242 600275..600766 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 600766 16978242 LY180_02840 Escherichia coli LY180 hypothetical protein YP_008563709.1 600275 D 1335916 CDS YP_008563710.1 544389324 16978243 complement(601281..601652) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 601652 16978243 LY180_02845 Escherichia coli LY180 hypothetical protein YP_008563710.1 601281 R 1335916 CDS YP_008563711.1 544389325 16978244 complement(601768..602862) 1 NC_022364.1 catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA 2-selenouridine synthase 602862 16978244 LY180_02850 Escherichia coli LY180 tRNA 2-selenouridine synthase YP_008563711.1 601768 R 1335916 CDS YP_008563712.1 544389326 16978245 complement(602931..603857) 1 NC_022364.1 activator of the allDC-ylbA operon involved in allantoin utilization; Derived by automated computational analysis using gene prediction method: Protein Homology.; LysR family transcriptional regulator 603857 16978245 LY180_02855 Escherichia coli LY180 LysR family transcriptional regulator YP_008563712.1 602931 R 1335916 CDS YP_008563713.1 544389327 16978246 604087..604569 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ureidoglycolate hydrolase 604569 16978246 LY180_02860 Escherichia coli LY180 ureidoglycolate hydrolase YP_008563713.1 604087 D 1335916 CDS YP_008563714.1 544389328 16978247 604647..605462 1 NC_022364.1 regulates operons involved in the utilization of allantoin; Derived by automated computational analysis using gene prediction method: Protein Homology.; IclR family transcriptional regulator 605462 16978247 LY180_02865 Escherichia coli LY180 IclR family transcriptional regulator YP_008563714.1 604647 D 1335916 CDS YP_008563715.1 544389329 16978248 605552..607333 1 NC_022364.1 catalyzes the formation of 2-hydroxy-3-oxopropanoate (tartronate semialdehyde) from two molecules of glyoxylate; Derived by automated computational analysis using gene prediction method: Protein Homology.; glyoxylate carboligase 607333 16978248 LY180_02870 Escherichia coli LY180 glyoxylate carboligase YP_008563715.1 605552 D 1335916 CDS YP_008563716.1 544389330 16978249 607346..608122 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hydroxypyruvate isomerase 608122 16978249 LY180_02875 Escherichia coli LY180 hydroxypyruvate isomerase YP_008563716.1 607346 D 1335916 CDS YP_008563717.1 544389331 16978250 608222..609100 1 NC_022364.1 NADH-dependent; catalyzed the reversible formation of glycerate from tartronate semialdehyde; Derived by automated computational analysis using gene prediction method: Protein Homology.; tartronate semialdehyde reductase 609100 16978250 LY180_02880 Escherichia coli LY180 tartronate semialdehyde reductase YP_008563717.1 608222 D 1335916 CDS YP_008563718.1 544389332 16978251 609269..610723 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; allantoin permease 610723 16978251 LY180_02885 Escherichia coli LY180 allantoin permease YP_008563718.1 609269 D 1335916 CDS YP_008563719.1 544389333 16978252 610783..612144 1 NC_022364.1 Plays a crucial role on both purine and pyrimidine metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.; allantoinase 612144 16978252 LY180_02890 Escherichia coli LY180 allantoinase YP_008563719.1 610783 D 1335916 CDS YP_008563720.1 544389334 16978253 612201..613502 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; purine permease 613502 16978253 LY180_02895 Escherichia coli LY180 purine permease YP_008563720.1 612201 D 1335916 CDS YP_008563721.1 544389335 16978254 613524..614669 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glycerate kinase 614669 16978254 LY180_02900 Escherichia coli LY180 glycerate kinase YP_008563721.1 613524 D 1335916 CDS YP_008563722.1 544389336 16978255 complement(614798..615583) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 615583 16978255 LY180_02905 Escherichia coli LY180 hypothetical protein YP_008563722.1 614798 R 1335916 CDS YP_008563723.1 544389337 16978256 complement(615594..616829) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; allantoate amidohydrolase 616829 16978256 LY180_02910 Escherichia coli LY180 allantoate amidohydrolase YP_008563723.1 615594 R 1335916 CDS YP_008563724.1 544389338 16978257 complement(616851..617900) 1 NC_022364.1 catalyzes the formation of oxalurate from ureidoglycolate; Derived by automated computational analysis using gene prediction method: Protein Homology.; ureidoglycolate dehydrogenase 617900 16978257 LY180_02915 Escherichia coli LY180 ureidoglycolate dehydrogenase YP_008563724.1 616851 R 1335916 CDS YP_008563725.1 544389339 16978258 618217..619884 1 NC_022364.1 multicopy suppressor of dominant negative ftsH mutations; putative acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 619884 16978258 LY180_02920 Escherichia coli LY180 membrane protein YP_008563725.1 618217 D 1335916 CDS YP_008563726.1 544389340 16978259 619894..621153 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 621153 16978259 LY180_02925 Escherichia coli LY180 hypothetical protein YP_008563726.1 619894 D 1335916 CDS YP_008563727.1 544389341 16978260 621164..621979 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 621979 16978260 LY180_02930 Escherichia coli LY180 hypothetical protein YP_008563727.1 621164 D 1335916 CDS YP_008563728.1 544389342 16978261 621976..622869 1 NC_022364.1 reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; Derived by automated computational analysis using gene prediction method: Protein Homology.; carbamate kinase 622869 16978261 LY180_02935 Escherichia coli LY180 carbamate kinase YP_008563728.1 621976 D 1335916 CDS YP_008563729.1 544389343 16978262 complement(623006..624073) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoribosylaminoimidazole carboxylase 624073 16978262 LY180_02940 Escherichia coli LY180 phosphoribosylaminoimidazole carboxylase YP_008563729.1 623006 R 1335916 CDS YP_008563730.1 544389344 16978263 complement(624070..624579) 1 NC_022364.1 catalyzes the formation of 4-carboxy-5-aminoimidazole ribonucleotide from N5-carboxyaminoimidazole ribonucleotide; Derived by automated computational analysis using gene prediction method: Protein Homology.; N5-carboxyaminoimidazole ribonucleotide mutase 624579 purE 16978263 purE Escherichia coli LY180 N5-carboxyaminoimidazole ribonucleotide mutase YP_008563730.1 624070 R 1335916 CDS YP_008563731.1 544389345 16978264 complement(624697..625419) 1 NC_022364.1 catalyzes the formation of 2,3=diacylglucosamine 1-phosphate from UDP-2,3=diacylglucosamine; Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP-2,3-diacylglucosamine hydrolase 625419 16978264 LY180_02950 Escherichia coli LY180 UDP-2,3-diacylglucosamine hydrolase YP_008563731.1 624697 R 1335916 CDS YP_008563732.1 544389346 16978265 complement(625422..625916) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidyl-prolyl cis-trans isomerase 625916 16978265 LY180_02955 Escherichia coli LY180 peptidyl-prolyl cis-trans isomerase YP_008563732.1 625422 R 1335916 CDS YP_008563733.1 544389347 16978266 626090..627475 1 NC_022364.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; cysteinyl-tRNA synthetase 627475 cysS 16978266 cysS Escherichia coli LY180 cysteinyl-tRNA synthetase YP_008563733.1 626090 D 1335916 CDS YP_008563734.1 544389348 16978267 complement(627511..628032) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 628032 16978267 LY180_02965 Escherichia coli LY180 membrane protein YP_008563734.1 627511 R 1335916 CDS YP_008563735.1 544389349 16978268 complement(628140..628352) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ribosome-associated protein 628352 16978268 LY180_02970 Escherichia coli LY180 ribosome-associated protein YP_008563735.1 628140 R 1335916 CDS YP_008563736.1 544389350 16978269 complement(628354..629220) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; methenyltetrahydrofolate cyclohydrolase 629220 16978269 LY180_02975 Escherichia coli LY180 methenyltetrahydrofolate cyclohydrolase YP_008563736.1 628354 R 1335916 CDS YP_008563737.1 544389351 16978270 629701..630243 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; type-1 fimbrial protein subunit A 630243 fimA 16978270 fimA Escherichia coli LY180 type-1 fimbrial protein subunit A YP_008563737.1 629701 D 1335916 CDS YP_008563738.1 544389352 16978271 630463..631155 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; molecular chaperone 631155 16978271 LY180_02985 Escherichia coli LY180 molecular chaperone YP_008563738.1 630463 D 1335916 CDS YP_008563739.1 544389353 16982287 633807..634814 1 NC_022364.1 involved in the regulation of fimbriae length and mediates adhesion of type 1 fimbriae; Derived by automated computational analysis using gene prediction method: Protein Homology.; adhesin 634814 fimH 16982287 fimH Escherichia coli LY180 adhesin YP_008563739.1 633807 D 1335916 CDS YP_008563740.1 544389354 16978273 634825..635340 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein 635340 16978273 LY180_02995 Escherichia coli LY180 fimbrial protein YP_008563740.1 634825 D 1335916 CDS YP_008563741.1 544389355 16978274 complement(635343..635990) 1 NC_022364.1 activates the production of the major fimbrae protein FimA; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 635990 16978274 LY180_03000 Escherichia coli LY180 transcriptional regulator YP_008563741.1 635343 R 1335916 CDS YP_008563742.1 544389356 16978276 complement(636340..637101) 1 NC_022364.1 regulates genes involved in arginine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 637101 16978276 LY180_03010 Escherichia coli LY180 transcriptional regulator YP_008563742.1 636340 R 1335916 CDS YP_008563743.1 544389357 16978277 complement(637284..638174) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 638174 16978277 LY180_03015 Escherichia coli LY180 hypothetical protein YP_008563743.1 637284 R 1335916 CDS YP_008563744.1 544389358 16978278 complement(638175..641147) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 641147 16978278 LY180_03020 Escherichia coli LY180 hypothetical protein YP_008563744.1 638175 R 1335916 CDS YP_008563745.1 544389359 16978279 complement(641134..643371) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glycosyl transferase family 2 643371 nfrB 16978279 nfrB Escherichia coli LY180 glycosyl transferase family 2 YP_008563745.1 641134 R 1335916 CDS YP_008563746.1 544389360 16978280 complement(643640..644776) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 644776 16978280 LY180_03030 Escherichia coli LY180 hypothetical protein YP_008563746.1 643640 R 1335916 CDS YP_008563747.1 544392865 16978281 complement(644880..645191) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; type IV secretion protein Rhs 645191 16978281 LY180_03035 Escherichia coli LY180 type IV secretion protein Rhs YP_008563747.1 644880 R 1335916 CDS YP_008563748.1 544389361 16978282 complement(645306..645557) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 645557 16978282 LY180_03040 Escherichia coli LY180 hypothetical protein YP_008563748.1 645306 R 1335916 CDS YP_008563749.1 544392866 16978283 complement(645554..647353) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; type IV secretion protein Rhs 647353 16978283 LY180_03045 Escherichia coli LY180 type IV secretion protein Rhs YP_008563749.1 645554 R 1335916 CDS YP_008563750.1 544392867 16978284 complement(647600..648013) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 648013 16978284 LY180_03050 Escherichia coli LY180 hypothetical protein YP_008563750.1 647600 R 1335916 CDS YP_008563751.1 544392868 16978285 complement(648013..650157) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; sugar-binding protein 650157 16978285 LY180_03055 Escherichia coli LY180 sugar-binding protein YP_008563751.1 648013 R 1335916 CDS YP_008563752.1 544392869 16978286 complement(650284..650823) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 650823 16978286 LY180_03060 Escherichia coli LY180 hypothetical protein YP_008563752.1 650284 R 1335916 CDS YP_008563753.1 544392870 16978287 complement(650811..655631) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; type IV secretion protein Rhs 655631 16978287 LY180_03065 Escherichia coli LY180 type IV secretion protein Rhs YP_008563753.1 650811 R 1335916 CDS YP_008563754.1 544392871 16978288 complement(655651..656112) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 656112 16978288 LY180_03070 Escherichia coli LY180 hypothetical protein YP_008563754.1 655651 R 1335916 CDS YP_008563755.1 544389362 16978289 complement(656140..658041) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Vgr protein 658041 16978289 LY180_03075 Escherichia coli LY180 Vgr protein YP_008563755.1 656140 R 1335916 CDS YP_008563756.1 544389363 16978290 complement(658778..660226) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sensor kinase CusS 660226 16978290 LY180_03080 Escherichia coli LY180 sensor kinase CusS YP_008563756.1 658778 R 1335916 CDS YP_008563757.1 544389364 16978291 complement(660216..660899) 1 NC_022364.1 response regulator in two-component regulatory system with CusS; regulates the copper efflux system; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 660899 16978291 LY180_03085 Escherichia coli LY180 transcriptional regulator YP_008563757.1 660216 R 1335916 CDS YP_008563758.1 544389365 16978292 661056..662438 1 NC_022364.1 with CusA, CusB and CusF is part of a cation efflux system that mediates resistance to copper and silver; Derived by automated computational analysis using gene prediction method: Protein Homology.; cation transporter 662438 16978292 LY180_03090 Escherichia coli LY180 cation transporter YP_008563758.1 661056 D 1335916 CDS YP_008563759.1 544389366 16978293 662462..662794 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cation transporter 662794 16978293 LY180_03095 Escherichia coli LY180 cation transporter YP_008563759.1 662462 D 1335916 CDS YP_008563760.1 544389367 16978294 662810..664033 1 NC_022364.1 with CusA, CusC and CusF is part of a cation efflux system that mediates resistance to copper and silver; Derived by automated computational analysis using gene prediction method: Protein Homology.; metal RND transporter 664033 16978294 LY180_03100 Escherichia coli LY180 metal RND transporter YP_008563760.1 662810 D 1335916 CDS YP_008563761.1 544389368 16978295 664045..667188 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cation transporter 667188 16978295 LY180_03105 Escherichia coli LY180 cation transporter YP_008563761.1 664045 D 1335916 CDS YP_008563762.1 544389369 16978296 667290..668666 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; aromatic amino acid transporter 668666 16978296 LY180_03110 Escherichia coli LY180 aromatic amino acid transporter YP_008563762.1 667290 D 1335916 CDS YP_008563763.1 544389370 16978297 complement(668734..669981) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; miniconductance mechanosensitive channel 669981 16978297 LY180_03115 Escherichia coli LY180 miniconductance mechanosensitive channel YP_008563763.1 668734 R 1335916 CDS YP_008563764.1 544389371 16978298 complement(670089..670742) 1 NC_022364.1 catalyzes the reduction of nitroaromatic compounds such as nitrofurazone, quinones and the anti-tumor agent CB1954; NAD(P)H-dependent; oxygen insensitive; Derived by automated computational analysis using gene prediction method: Protein Homology.; dihydropteridine reductase 670742 16978298 LY180_03120 Escherichia coli LY180 dihydropteridine reductase YP_008563764.1 670089 R 1335916 CDS YP_008563765.1 544389372 16978299 complement(670836..671204) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 671204 16978299 LY180_03125 Escherichia coli LY180 hypothetical protein YP_008563765.1 670836 R 1335916 CDS YP_008563766.1 544389373 16978300 complement(671269..671517) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 671517 16978300 LY180_03130 Escherichia coli LY180 membrane protein YP_008563766.1 671269 R 1335916 CDS YP_008563767.1 544389374 16978301 complement(671583..672701) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; gamma-glutamyl:cysteine ligase 672701 16978301 LY180_03135 Escherichia coli LY180 gamma-glutamyl:cysteine ligase YP_008563767.1 671583 R 1335916 CDS YP_008563768.1 544392872 16978302 672776..672877 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 672877 16978302 LY180_03140 Escherichia coli LY180 hypothetical protein YP_008563768.1 672776 D 1335916 CDS YP_008563769.1 544389375 16978303 673143..673295 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 673295 16978303 LY180_03145 Escherichia coli LY180 hypothetical protein YP_008563769.1 673143 D 1335916 CDS YP_008563770.1 544389376 16978304 673547..673798 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 673798 16978304 LY180_03150 Escherichia coli LY180 hypothetical protein YP_008563770.1 673547 D 1335916 CDS YP_008563771.1 544389377 16978305 complement(673920..674549) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 4'-phosphopantetheinyl transferase 674549 16978305 LY180_03155 Escherichia coli LY180 4'-phosphopantetheinyl transferase YP_008563771.1 673920 R 1335916 CDS YP_008563772.1 544389378 16978306 complement(674715..676955) 1 NC_022364.1 Fep; Cbt; Cbr; FeuB; FepA; PfeA; IroN; BfeA; outer membrane receptor of ferric enterobactin and colicins B and D; interacts with the TonB-ExbBD complex which catalyzes the translocation of the siderophore to the periplasmic space; Derived by automated computational analysis using gene prediction method: Protein Homology.; outer membrane receptor FepA 676955 16978306 LY180_03165 Escherichia coli LY180 outer membrane receptor FepA YP_008563772.1 674715 R 1335916 CDS YP_008563773.1 544392873 16978307 677198..678400 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; enterobactin/ferric enterobactin esterase 678400 16978307 LY180_03170 Escherichia coli LY180 enterobactin/ferric enterobactin esterase YP_008563773.1 677198 D 1335916 CDS YP_008563774.1 544389379 16978308 678403..678621 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 678621 16978308 LY180_03175 Escherichia coli LY180 hypothetical protein YP_008563774.1 678403 D 1335916 CDS YP_008563775.1 544389380 16978309 678618..682499 1 NC_022364.1 with EntB, EntD, and EntE forms the multienzyme complex enterobactin synthase; EntF is the serine activating enzyme which catalyzes the formation of the amide and ester bonds of the cyclic enterobactin; Derived by automated computational analysis using gene prediction method: Protein Homology.; enterobactin synthase subunit F 682499 entF 16978309 entF Escherichia coli LY180 enterobactin synthase subunit F YP_008563775.1 678618 D 1335916 CDS YP_008563776.1 544389381 16978310 682715..683848 1 NC_022364.1 in Salmonella is responsible for long O-antigen polymerization; may be part of the ferric enterobactin transport system; necessary for enetrobactin uptake; Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 683848 16978310 LY180_03185 Escherichia coli LY180 hypothetical protein YP_008563776.1 682715 D 1335916 CDS YP_008563777.1 544389382 16978311 complement(683845..684660) 1 NC_022364.1 with FepBDE is involved in the transport of ferric enterobactin; Derived by automated computational analysis using gene prediction method: Protein Homology.; iron-enterobactin transporter ATP-binding protein 684660 16978311 LY180_03190 Escherichia coli LY180 iron-enterobactin transporter ATP-binding protein YP_008563777.1 683845 R 1335916 CDS YP_008563778.1 544389383 16978312 complement(684657..685649) 1 NC_022364.1 with FepBCD is involved in the transport of ferric enterobactin; Derived by automated computational analysis using gene prediction method: Protein Homology.; iron-enterobactin transporter permease 685649 16978312 LY180_03195 Escherichia coli LY180 iron-enterobactin transporter permease YP_008563778.1 684657 R 1335916 CDS YP_008563779.1 544389384 16978313 complement(685646..686650) 1 NC_022364.1 with FepBCG is involved in the transport of ferric enterobactin; Derived by automated computational analysis using gene prediction method: Protein Homology.; iron-enterobactin transporter membrane protein 686650 16978313 LY180_03200 Escherichia coli LY180 iron-enterobactin transporter membrane protein YP_008563779.1 685646 R 1335916 CDS YP_008563780.1 544389385 16978314 686761..688011 1 NC_022364.1 protein p43; inner membrane protein that exports enterobactin to the periplasmic space; member of the major facilitator superfamily (MFS) of transporters; Derived by automated computational analysis using gene prediction method: Protein Homology.; enterobactin exporter EntS 688011 16978314 LY180_03205 Escherichia coli LY180 enterobactin exporter EntS YP_008563780.1 686761 D 1335916 CDS YP_008563781.1 544389386 16978315 complement(688015..688971) 1 NC_022364.1 with FepCDG is involved in the transport of ferric enterobactin; Derived by automated computational analysis using gene prediction method: Protein Homology.; antibiotic ABC transporter substrate-binding protein 688971 16978315 LY180_03210 Escherichia coli LY180 antibiotic ABC transporter substrate-binding protein YP_008563781.1 688015 R 1335916 CDS YP_008563782.1 544389387 16978316 689346..690521 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; isochorismate synthase EntC 690521 16978316 LY180_03215 Escherichia coli LY180 isochorismate synthase EntC YP_008563782.1 689346 D 1335916 CDS YP_008563783.1 544389388 16978317 690531..692141 1 NC_022364.1 bifunctional 2,3-dihydroxybenzoate-AMP ligase/S-dihydroxybenzoyltransferase; activates the carboxylate group of 2,3-dihydroxy-benzoate forming (2,3-dihydroxybenzoyl)adenylate then catalyzes the acylation of holo-entB with 2,3-dihydroxy-benzoate adenylate; Derived by automated computational analysis using gene prediction method: Protein Homology.; enterobactin synthase subunit E 692141 entE 16978317 entE Escherichia coli LY180 enterobactin synthase subunit E YP_008563783.1 690531 D 1335916 CDS YP_008563784.1 544389389 16978318 692155..693012 1 NC_022364.1 2,3 dihydro-2,3 dihydroxybenzoate synthase; catalyzes the formation of 2,3 dihydro-2,3 dihydroxybenzoate and pyruvate from isochorismate; with Ent DEF is involved in enterobactin synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; isochorismatase 693012 16978318 LY180_03225 Escherichia coli LY180 isochorismatase YP_008563784.1 692155 D 1335916 CDS YP_008563785.1 544389390 16978319 693012..693758 1 NC_022364.1 catalyzes the formation of 2,3-dihydroxybenzoate from 2,3-dihydro-2,3-dihydroxybenzoate; involved in the biosynthesis of siderophores, enterobactin, bacillibactin or vibriobactin; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2,3-dihydroxybenzoate-2,3-dehydrogenase 693758 16978319 LY180_03230 Escherichia coli LY180 2,3-dihydroxybenzoate-2,3-dehydrogenase YP_008563785.1 693012 D 1335916 CDS YP_008563786.1 544389391 16978320 693761..694174 1 NC_022364.1 required for efficient enterobactin production; Derived by automated computational analysis using gene prediction method: Protein Homology.; acyl-CoA esterase 694174 16978320 LY180_03235 Escherichia coli LY180 acyl-CoA esterase YP_008563786.1 693761 D 1335916 CDS YP_008563787.1 544389392 16978321 694355..696460 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; carbon starvation protein A 696460 16978321 LY180_03240 Escherichia coli LY180 carbon starvation protein A YP_008563787.1 694355 D 1335916 CDS YP_008563788.1 544389393 16978322 696642..696839 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 696839 16978322 LY180_03245 Escherichia coli LY180 hypothetical protein YP_008563788.1 696642 D 1335916 CDS YP_008563789.1 544389394 16978323 complement(696849..697937) 1 NC_022364.1 member of the iron-containing alcohol dehydrogenase family; Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase 697937 16978323 LY180_03250 Escherichia coli LY180 oxidoreductase YP_008563789.1 696849 R 1335916 CDS YP_008563790.1 544389395 16978324 698046..699206 1 NC_022364.1 catalyzes the transfer of an amino moiety; preference for methionine followed by histidine and phenylalanine; Derived by automated computational analysis using gene prediction method: Protein Homology.; aminotransferase 699206 16978324 LY180_03255 Escherichia coli LY180 aminotransferase YP_008563790.1 698046 D 1335916 CDS YP_008563791.1 544389396 16978325 complement(699207..699824) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 699824 16978325 LY180_03260 Escherichia coli LY180 hypothetical protein YP_008563791.1 699207 R 1335916 CDS YP_008563792.1 544389397 16978326 complement(699809..701029) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 701029 16978326 LY180_03265 Escherichia coli LY180 hypothetical protein YP_008563792.1 699809 R 1335916 CDS YP_008563793.1 544389398 16978327 complement(701176..702078) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LysR family transcripitonal regulator 702078 16978327 LY180_03270 Escherichia coli LY180 LysR family transcripitonal regulator YP_008563793.1 701176 R 1335916 CDS YP_008563794.1 544389399 16978328 complement(702287..703033) 1 NC_022364.1 Involved in disulfide bond formation; Derived by automated computational analysis using gene prediction method: Protein Homology.; disulfide isomerase 703033 dsbG 16978328 dsbG Escherichia coli LY180 disulfide isomerase YP_008563794.1 702287 R 1335916 CDS YP_008563795.1 544389400 16978329 703405..703968 1 NC_022364.1 with AhpF catalyzes the conversion of alkyl hydroperoxides to their corresponding alcohols; AhpC reduced the hydroperoxide substrate; Derived by automated computational analysis using gene prediction method: Protein Homology.; alkyl hydroperoxide reductase subunit C 703968 16978329 LY180_03280 Escherichia coli LY180 alkyl hydroperoxide reductase subunit C YP_008563795.1 703405 D 1335916 CDS YP_008563796.1 544392874 16978330 complement(704024..704140) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 704140 16978330 LY180_03285 Escherichia coli LY180 hypothetical protein YP_008563796.1 704024 R 1335916 CDS YP_008563797.1 544389401 16978331 704139..705704 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; alkyl hydroperoxide reductase subunit F 705704 16978331 LY180_03290 Escherichia coli LY180 alkyl hydroperoxide reductase subunit F YP_008563797.1 704139 D 1335916 CDS YP_008563798.1 544389402 16978332 complement(705825..706253) 1 NC_022364.1 interacts with GroEL; is induced by starvation, heat shock and toxic agents; Derived by automated computational analysis using gene prediction method: Protein Homology.; universal stress protein G 706253 16978332 LY180_03295 Escherichia coli LY180 universal stress protein G YP_008563798.1 705825 R 1335916 CDS YP_008563799.1 544389403 16978333 706474..707712 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; alcohol dehydrogenase 707712 16978333 LY180_03300 Escherichia coli LY180 alcohol dehydrogenase YP_008563799.1 706474 D 1335916 CDS YP_008563800.1 544392875 16978334 complement(707716..707805) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 707805 16978334 LY180_03305 Escherichia coli LY180 hypothetical protein YP_008563800.1 707716 R 1335916 CDS YP_008563801.1 544389404 16978335 complement(707943..708353) 1 NC_022364.1 Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis, CTP for lipid synthesis, and GTP for protein elongation; Derived by automated computational analysis using gene prediction method: Protein Homology.; nucleoside diphosphate kinase regulator 708353 16978335 LY180_03310 Escherichia coli LY180 nucleoside diphosphate kinase regulator YP_008563801.1 707943 R 1335916 CDS YP_008563802.1 544389405 16978336 complement(708583..709389) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonuclease I 709389 16978336 LY180_03315 Escherichia coli LY180 ribonuclease I YP_008563802.1 708583 R 1335916 CDS YP_008563803.1 544389406 16978337 complement(709503..710966) 1 NC_022364.1 involved in the transport of citrate into the cell along with the export of succinate out of the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; antiporter 710966 16978337 LY180_03320 Escherichia coli LY180 antiporter YP_008563803.1 709503 R 1335916 CDS YP_008563804.1 544389407 16978338 complement(711017..711895) 1 NC_022364.1 catalyzes the formation of 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA from ATP and 3-dephospho-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.; triphosphoribosyl-dephospho-CoA synthase 711895 citG 16978338 citG Escherichia coli LY180 triphosphoribosyl-dephospho-CoA synthase YP_008563804.1 711017 R 1335916 CDS YP_008563805.1 544389408 16978339 complement(711870..712421) 1 NC_022364.1 2'-(5''-phosphoribosyl)-3'-dephospho-CoA transferase; holo-citrate lyase synthase; CitG forms the prosthetic group precursor 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA which is then transferred to apo-ACP by CitX to produce holo-ACP and pyrophosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-(5''-triphosphoribosyl)-3'-dephospho-CoA synthase 712421 citX 16978339 citX Escherichia coli LY180 2-(5''-triphosphoribosyl)-3'-dephospho-CoA synthase YP_008563805.1 711870 R 1335916 CDS YP_008563806.1 544389409 16978340 complement(712425..713957) 1 NC_022364.1 citrate-ACP transferase, the alpha subunit catalyzes the formation of (3S)-citryl-CoA from acetyl-CoA and citrate; Derived by automated computational analysis using gene prediction method: Protein Homology.; citrate lyase subunit alpha 713957 16978340 LY180_03335 Escherichia coli LY180 citrate lyase subunit alpha YP_008563806.1 712425 R 1335916 CDS YP_008563807.1 544389410 16978341 complement(713968..714876) 1 NC_022364.1 citryl-ACP lyase; catalyzes the formation of acetate and oxaloacetate from citrate; Derived by automated computational analysis using gene prediction method: Protein Homology.; citrate lyase subunit beta 714876 16978341 LY180_03340 Escherichia coli LY180 citrate lyase subunit beta YP_008563807.1 713968 R 1335916 CDS YP_008563808.1 544389411 16978342 complement(714873..715169) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; citrate lyase subunit gamma 715169 16978342 LY180_03345 Escherichia coli LY180 citrate lyase subunit gamma YP_008563808.1 714873 R 1335916 CDS YP_008563809.1 544389412 16978343 complement(715184..716242) 1 NC_022364.1 activates citrate lyase by acetylation of the gamma subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.; [citrate [pro-3S]-lyase] ligase 716242 16978343 LY180_03350 Escherichia coli LY180 [citrate [pro-3S]-lyase] ligase YP_008563809.1 715184 R 1335916 CDS YP_008563810.1 544389413 16978344 716622..718280 1 NC_022364.1 regulates the expression of citrate fermentation genes; Derived by automated computational analysis using gene prediction method: Protein Homology.; sensor histidine kinase DpiB 718280 dpiB 16978344 dpiB Escherichia coli LY180 sensor histidine kinase DpiB YP_008563810.1 716622 D 1335916 CDS YP_008563811.1 544389414 16978345 718249..718929 1 NC_022364.1 regulates the expression of citrate fermentation genes; Derived by automated computational analysis using gene prediction method: Protein Homology.; two-protein response regulator DpiA 718929 dpiA 16978345 dpiA Escherichia coli LY180 two-protein response regulator DpiA YP_008563811.1 718249 D 1335916 CDS YP_008563812.1 544389415 16978346 complement(718970..720355) 1 NC_022364.1 responsible for the transport of C4-dicarboxylates during anaerobic growth; Derived by automated computational analysis using gene prediction method: Protein Homology.; C4-dicarboxylate ABC transporter 720355 dcuC 16978346 dcuC Escherichia coli LY180 C4-dicarboxylate ABC transporter YP_008563812.1 718970 R 1335916 CDS YP_008563813.1 544389416 16978347 720943..721503 1 NC_022364.1 catalyzes the transfer of palmitate to lipid A; Derived by automated computational analysis using gene prediction method: Protein Homology.; phospholipid:lipid A palmitoyltransferase 721503 pagP 16978347 pagP Escherichia coli LY180 phospholipid:lipid A palmitoyltransferase YP_008563813.1 720943 D 1335916 CDS YP_008563814.1 544389417 16978348 721678..721887 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; RNA chaperone/anti-terminator 721887 16978348 LY180_03375 Escherichia coli LY180 RNA chaperone/anti-terminator YP_008563814.1 721678 D 1335916 CDS YP_008563815.1 544389418 16978349 complement(721941..722324) 1 NC_022364.1 camphor resistance protein CrcB; may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; Derived by automated computational analysis using gene prediction method: Protein Homology.; camphor resistance protein CrcB 722324 16978349 LY180_03380 Escherichia coli LY180 camphor resistance protein CrcB YP_008563815.1 721941 R 1335916 CDS YP_008563816.1 544389419 16978350 722417..723205 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrolase 723205 16978350 LY180_03385 Escherichia coli LY180 hydrolase YP_008563816.1 722417 D 1335916 CDS YP_008563817.1 544389420 16978351 723334..723537 1 NC_022364.1 TatE; similar to TatA and found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; Derived by automated computational analysis using gene prediction method: Protein Homology.; preprotein translocase subunit TatE 723537 tatE 16978351 tatE Escherichia coli LY180 preprotein translocase subunit TatE YP_008563817.1 723334 D 1335916 CDS YP_008563818.1 544389421 16978352 complement(723638..724603) 1 NC_022364.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; Derived by automated computational analysis using gene prediction method: Protein Homology.; lipoyl synthase 724603 16978352 LY180_03395 Escherichia coli LY180 lipoyl synthase YP_008563818.1 723638 R 1335916 CDS YP_008563819.1 544389422 16978353 complement(724812..725765) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LysR family transcriptional regulator 725765 16978353 LY180_03400 Escherichia coli LY180 LysR family transcriptional regulator YP_008563819.1 724812 R 1335916 CDS YP_008563820.1 544389423 16978354 complement(726024..726665) 1 NC_022364.1 lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; lipoate-protein ligase B 726665 16978354 LY180_03405 Escherichia coli LY180 lipoate-protein ligase B YP_008563820.1 726024 R 1335916 CDS YP_008563821.1 544389424 16978355 complement(726766..727029) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 727029 16978355 LY180_03410 Escherichia coli LY180 hypothetical protein YP_008563821.1 726766 R 1335916 CDS YP_008563822.1 544389425 16978356 complement(727140..728351) 1 NC_022364.1 penicillin-binding protein 5; removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors; Derived by automated computational analysis using gene prediction method: Protein Homology.; D-alanyl-D-alanine carboxypeptidase 728351 16978356 LY180_03415 Escherichia coli LY180 D-alanyl-D-alanine carboxypeptidase YP_008563822.1 727140 R 1335916 CDS YP_008563823.1 544389426 16978357 complement(728491..729579) 1 NC_022364.1 septal ring protein, suppressor of prc, minor lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.; rare lipoprotein A 729579 16978357 LY180_03420 Escherichia coli LY180 rare lipoprotein A YP_008563823.1 728491 R 1335916 CDS YP_008563824.1 544389427 16978358 complement(729590..730702) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cell wall shape-determining protein 730702 16978358 LY180_03425 Escherichia coli LY180 cell wall shape-determining protein YP_008563824.1 729590 R 1335916 CDS YP_008563825.1 544389428 16978359 complement(730705..732606) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; penicillin-binding protein 2 732606 16978359 LY180_03430 Escherichia coli LY180 penicillin-binding protein 2 YP_008563825.1 730705 R 1335916 CDS YP_008563826.1 544389429 16978360 complement(732637..733104) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S rRNA methyltransferase 733104 16978360 LY180_03435 Escherichia coli LY180 50S rRNA methyltransferase YP_008563826.1 732637 R 1335916 CDS YP_008563827.1 544389430 16978361 complement(733108..733425) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ribosome-associated protein 733425 16978361 LY180_03440 Escherichia coli LY180 ribosome-associated protein YP_008563827.1 733108 R 1335916 CDS YP_008563828.1 544389431 16978362 complement(733685..734296) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; alpha-ribazole phosphatase 734296 16978362 LY180_03445 Escherichia coli LY180 alpha-ribazole phosphatase YP_008563828.1 733685 R 1335916 CDS YP_008563829.1 544389432 16978363 complement(734320..734961) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; nicotinic acid mononucleotide adenylyltransferase 734961 16978363 LY180_03450 Escherichia coli LY180 nicotinic acid mononucleotide adenylyltransferase YP_008563829.1 734320 R 1335916 CDS YP_008563830.1 544389433 16978364 complement(734963..735994) 1 NC_022364.1 required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA polymerase III subunit delta 735994 holA 16978364 holA Escherichia coli LY180 DNA polymerase III subunit delta YP_008563830.1 734963 R 1335916 CDS YP_008563831.1 544389434 16978365 complement(735994..736575) 1 NC_022364.1 rare lipoprotein B; involved in the assembly of LPS in the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; LPS-assembly lipoprotein RlpB 736575 16978365 LY180_03460 Escherichia coli LY180 LPS-assembly lipoprotein RlpB YP_008563831.1 735994 R 1335916 CDS YP_008563832.1 544389435 16978366 complement(736590..739172) 1 NC_022364.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.; leucyl-tRNA synthetase 739172 leuS 16978366 leuS Escherichia coli LY180 leucyl-tRNA synthetase YP_008563832.1 736590 R 1335916 CDS YP_008563833.1 544389436 16978367 739407..739889 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 739889 16978367 LY180_03470 Escherichia coli LY180 hypothetical protein YP_008563833.1 739407 D 1335916 CDS YP_008563834.1 544389437 16978368 complement(739959..740936) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 740936 16978368 LY180_03475 Escherichia coli LY180 hypothetical protein YP_008563834.1 739959 R 1335916 CDS YP_008563835.1 544389438 16978369 741100..741807 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 741807 16978369 LY180_03480 Escherichia coli LY180 hypothetical protein YP_008563835.1 741100 D 1335916 CDS YP_008563836.1 544389439 16978370 741804..743231 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; molecular chaperone DnaJ 743231 16978370 LY180_03485 Escherichia coli LY180 molecular chaperone DnaJ YP_008563836.1 741804 D 1335916 CDS YP_008563837.1 544389440 16978371 complement(743241..743795) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 743795 16978371 LY180_03490 Escherichia coli LY180 hypothetical protein YP_008563837.1 743241 R 1335916 CDS YP_008563838.1 544389441 16978372 743896..744603 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 744603 16978372 LY180_03495 Escherichia coli LY180 hypothetical protein YP_008563838.1 743896 D 1335916 CDS YP_008563839.1 544389442 16978373 complement(746111..747781) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; molecular chaperone HscC 747781 16978373 LY180_03500 Escherichia coli LY180 molecular chaperone HscC YP_008563839.1 746111 R 1335916 CDS YP_008563840.1 544389443 16978374 complement(747865..748800) 1 NC_022364.1 Hydrolyzes with equal efficiency cytidine or uridine to ribose and cytosine or uracil, respectively; pyrimidine-specific; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonucleoside hydrolase 748800 rihA 16978374 rihA Escherichia coli LY180 ribonucleoside hydrolase YP_008563840.1 747865 R 1335916 CDS YP_008563841.1 544389444 16978375 complement(748918..749643) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; amino acid ABC transporter ATP-binding protein 749643 16978375 LY180_03510 Escherichia coli LY180 amino acid ABC transporter ATP-binding protein YP_008563841.1 748918 R 1335916 CDS YP_008563842.1 544389445 16978376 complement(749643..750317) 1 NC_022364.1 with GltJLPS and GadC for glutamate and GltJLP, DctA and DcuAB for aspartate is involved in the transport of glutamate and aspartate; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutamate/aspartate transporter permease GltK 750317 16978376 LY180_03515 Escherichia coli LY180 glutamate/aspartate transporter permease GltK YP_008563842.1 749643 R 1335916 CDS YP_008563843.1 544389446 16978377 complement(750317..751057) 1 NC_022364.1 with GltIKL is involved in the transport of glutamate and aspartate; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutamate/aspartate ABC transporter permease GltJ 751057 16978377 LY180_03520 Escherichia coli LY180 glutamate/aspartate ABC transporter permease GltJ YP_008563843.1 750317 R 1335916 CDS YP_008563844.1 544389447 16978378 complement(751227..752135) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; amino acid transporter 752135 16978378 LY180_03525 Escherichia coli LY180 amino acid transporter YP_008563844.1 751227 R 1335916 CDS YP_008563845.1 544392876 16978379 752590..753387 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; rhomboid family protein 753387 16978379 LY180_03530 Escherichia coli LY180 rhomboid family protein YP_008563845.1 752590 D 1335916 CDS YP_008563846.1 544392877 16978380 753486..754466 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; peptidase S54 754466 16978380 LY180_03535 Escherichia coli LY180 peptidase S54 YP_008563846.1 753486 D 1335916 CDS YP_008563847.1 544389448 16978381 complement(754544..756082) 1 NC_022364.1 Transfers the fatty acyl group on membrane lipoproteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; apolipoprotein N-acyltransferase 756082 lnt 16978381 lnt Escherichia coli LY180 apolipoprotein N-acyltransferase YP_008563847.1 754544 R 1335916 CDS YP_008563848.1 544389449 16978382 complement(756107..756985) 1 NC_022364.1 involved in the transport of magnesium and cobalt ions; Derived by automated computational analysis using gene prediction method: Protein Homology.; cobalt transporter 756985 16978382 LY180_03545 Escherichia coli LY180 cobalt transporter YP_008563848.1 756107 R 1335916 CDS YP_008563849.1 544389450 16978383 complement(757075..757542) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; metal-binding heat shock protein 757542 16978383 LY180_03550 Escherichia coli LY180 metal-binding heat shock protein YP_008563849.1 757075 R 1335916 CDS YP_008563850.1 544389451 16978384 complement(757539..758579) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; nucleoside triphosphate hydrolase 758579 16978384 LY180_03555 Escherichia coli LY180 nucleoside triphosphate hydrolase YP_008563850.1 757539 R 1335916 CDS YP_008563851.1 544389452 16978385 complement(758732..760156) 1 NC_022364.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); Derived by automated computational analysis using gene prediction method: Protein Homology.; (dimethylallyl)adenosine tRNA methylthiotransferase 760156 16978385 LY180_03560 Escherichia coli LY180 (dimethylallyl)adenosine tRNA methylthiotransferase YP_008563851.1 758732 R 1335916 CDS YP_008563852.1 544389453 16978386 760302..761477 1 NC_022364.1 catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol; functions in the biosynthesis of ubiquinone or coenzyme Q; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 761477 ubiF 16978386 ubiF Escherichia coli LY180 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase YP_008563852.1 760302 D 1335916 CDS YP_008563853.1 544389454 16978393 complement(762606..764270) 1 NC_022364.1 functions in asparagine biosynthesis; converts glutamine, aspartate, ATP, and water to glutamate, asparagine, pyrophosphate and AMP; Derived by automated computational analysis using gene prediction method: Protein Homology.; asparagine synthetase B 764270 asnB 16978393 asnB Escherichia coli LY180 asparagine synthetase B YP_008563853.1 762606 R 1335916 CDS YP_008563854.1 544389455 16978394 complement(764527..765279) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; UMP phosphatase 765279 16978394 LY180_03605 Escherichia coli LY180 UMP phosphatase YP_008563854.1 764527 R 1335916 CDS YP_008563855.1 544389456 16978395 complement(765327..766547) 1 NC_022364.1 regulates the synthesis of glucosamine and N-acetylglucosamine by acting as a repressor of the nagEBACD operon and both a repressor and activator of the glmSU operon; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 766547 16978395 LY180_03610 Escherichia coli LY180 transcriptional regulator YP_008563855.1 765327 R 1335916 CDS YP_008563856.1 544389457 16978396 complement(766556..767704) 1 NC_022364.1 catalyzes the formation of glucosamine 6-phosphate from N-acetylglucosamine 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; N-acetylglucosamine-6-phosphate deacetylase 767704 nagA 16978396 nagA Escherichia coli LY180 N-acetylglucosamine-6-phosphate deacetylase YP_008563856.1 766556 R 1335916 CDS YP_008563857.1 544389458 16978397 complement(767763..768563) 1 NC_022364.1 catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; glucosamine-6-phosphate deaminase 768563 nagB 16978397 nagB Escherichia coli LY180 glucosamine-6-phosphate deaminase YP_008563857.1 767763 R 1335916 CDS YP_008563858.1 544389459 16978398 768896..770842 1 NC_022364.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS N-acetylglucosamine transporter subunit IIABC 770842 16978398 LY180_03625 Escherichia coli LY180 PTS N-acetylglucosamine transporter subunit IIABC YP_008563858.1 768896 D 1335916 CDS YP_008563859.1 544389460 16978399 771045..772709 1 NC_022364.1 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutaminyl-tRNA synthetase 772709 16978399 LY180_03630 Escherichia coli LY180 glutaminyl-tRNA synthetase YP_008563859.1 771045 D 1335916 CDS YP_008563860.1 544389461 16978400 773155..774561 1 NC_022364.1 outer membrane porin involved in the transport of chitooligosaccharides; Derived by automated computational analysis using gene prediction method: Protein Homology.; chitoporin 774561 chiP 16978400 chiP Escherichia coli LY180 chitoporin YP_008563860.1 773155 D 1335916 CDS YP_008563861.1 544389462 16978401 774611..774937 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 774937 16978401 LY180_03640 Escherichia coli LY180 hypothetical protein YP_008563861.1 774611 D 1335916 CDS YP_008563862.1 544389463 16978402 complement(775021..775467) 1 NC_022364.1 negatively regulates a number of operons that encode enzymes involved in iron transport; activated by manganese; forms a homodimer; Derived by automated computational analysis using gene prediction method: Protein Homology.; ferric uptake regulator 775467 fur 16978402 fur Escherichia coli LY180 ferric uptake regulator YP_008563862.1 775021 R 1335916 CDS YP_008563863.1 544389464 16978403 complement(775756..776286) 1 NC_022364.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; Derived by automated computational analysis using gene prediction method: Protein Homology.; flavodoxin 776286 16978403 LY180_03650 Escherichia coli LY180 flavodoxin YP_008563863.1 775756 R 1335916 CDS YP_008563864.1 544389465 16978404 complement(776426..776788) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LexA regulated protein 776788 16978404 LY180_03655 Escherichia coli LY180 LexA regulated protein YP_008563864.1 776426 R 1335916 CDS YP_008563865.1 544389466 16978405 complement(776859..777623) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acyl-CoA esterase 777623 16978405 LY180_03660 Escherichia coli LY180 acyl-CoA esterase YP_008563865.1 776859 R 1335916 CDS YP_008563866.1 544389467 16978406 777808..778353 1 NC_022364.1 negative modulator of the initiation of chromosome replication; Derived by automated computational analysis using gene prediction method: Protein Homology.; replication initiation regulator SeqA 778353 16978406 LY180_03665 Escherichia coli LY180 replication initiation regulator SeqA YP_008563866.1 777808 D 1335916 CDS YP_008563867.1 544389468 16978407 778379..780019 1 NC_022364.1 catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoglucomutase 780019 16978407 LY180_03670 Escherichia coli LY180 phosphoglucomutase YP_008563867.1 778379 D 1335916 CDS YP_008563868.1 544389469 16978408 complement(780075..781394) 1 NC_022364.1 catalyzes the uptake of putrescine via a proton symport mechanism, as well as the efflux of putrescine by a putrescine/ornithine antiport system; Derived by automated computational analysis using gene prediction method: Protein Homology.; putrescine transporter 781394 potE 16978408 potE Escherichia coli LY180 putrescine transporter YP_008563868.1 780075 R 1335916 CDS YP_008563869.1 544389470 16978409 complement(781391..783598) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ornithine decarboxylase 783598 16978409 LY180_03680 Escherichia coli LY180 ornithine decarboxylase YP_008563869.1 781391 R 1335916 CDS YP_008563870.1 544389471 16978410 complement(784279..784956) 1 NC_022364.1 response regulator in two-component regulatory system with KdpD; regulates the kdp operon involved in potassium transport; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 784956 16978410 LY180_03685 Escherichia coli LY180 transcriptional regulator YP_008563870.1 784279 R 1335916 CDS YP_008563871.1 544389472 16978411 complement(784953..787637) 1 NC_022364.1 sensory histidine kinase in two-component regulatory system with KdpE; signal sensing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; sensor protein KdpD 787637 16978411 LY180_03690 Escherichia coli LY180 sensor protein KdpD YP_008563871.1 784953 R 1335916 CDS YP_008563872.1 544389473 16978412 complement(787630..788202) 1 NC_022364.1 One of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex; Derived by automated computational analysis using gene prediction method: Protein Homology.; potassium-transporting ATPase subunit C 788202 16978412 LY180_03695 Escherichia coli LY180 potassium-transporting ATPase subunit C YP_008563872.1 787630 R 1335916 CDS YP_008563873.1 544389474 16978413 complement(788211..790259) 1 NC_022364.1 One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; Derived by automated computational analysis using gene prediction method: Protein Homology.; potassium-transporting ATPase subunit B 790259 16978413 LY180_03700 Escherichia coli LY180 potassium-transporting ATPase subunit B YP_008563873.1 788211 R 1335916 CDS YP_008563874.1 544389475 16978414 complement(790282..791955) 1 NC_022364.1 catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; Derived by automated computational analysis using gene prediction method: Protein Homology.; potassium-transporting ATPase subunit A 791955 16978414 LY180_03705 Escherichia coli LY180 potassium-transporting ATPase subunit A YP_008563874.1 790282 R 1335916 CDS YP_008563875.1 544392878 16978415 complement(791955..792044) 1 NC_022364.1 one of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; potassium transporter TrkA 792044 kdpF 16978415 kdpF Escherichia coli LY180 potassium transporter TrkA YP_008563875.1 791955 R 1335916 CDS YP_008563876.1 544389476 16978416 792357..792563 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 792563 16978416 LY180_03715 Escherichia coli LY180 hypothetical protein YP_008563876.1 792357 D 1335916 CDS YP_008563877.1 544392879 16978417 792806..797005 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; rhsA 797005 16978417 LY180_03720 Escherichia coli LY180 rhsA YP_008563877.1 792806 D 1335916 CDS YP_008563878.1 544389477 16978418 797002..797571 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 797571 16978418 LY180_03725 Escherichia coli LY180 hypothetical protein YP_008563878.1 797002 D 1335916 CDS YP_008563879.1 544392880 16978419 797797..798051 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase 798051 16978419 LY180_03730 Escherichia coli LY180 transposase YP_008563879.1 797797 D 1335916 CDS YP_008563880.1 544389478 16978421 799086..799595 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 799595 16978421 LY180_03740 Escherichia coli LY180 hypothetical protein YP_008563880.1 799086 D 1335916 CDS YP_008563881.1 544389479 16978422 799592..801010 1 NC_022364.1 UV-induced DNA repair; converts cyclobutane-type pyrimidine dimers created during exposure to UV ratiation to monomers; light dependent; Derived by automated computational analysis using gene prediction method: Protein Homology.; deoxyribodipyrimidine photolyase 801010 16978422 LY180_03745 Escherichia coli LY180 deoxyribodipyrimidine photolyase YP_008563881.1 799592 D 1335916 CDS YP_008563882.1 544389480 16978423 complement(801052..802533) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide ABC transporter permease 802533 16978423 LY180_03750 Escherichia coli LY180 peptide ABC transporter permease YP_008563882.1 801052 R 1335916 CDS YP_008563883.1 544389481 16978424 802804..803547 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; metal-binding protein 803547 16978424 LY180_03755 Escherichia coli LY180 metal-binding protein YP_008563883.1 802804 D 1335916 CDS YP_008563884.1 544389482 16978425 803570..804226 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 804226 16978425 LY180_03760 Escherichia coli LY180 hypothetical protein YP_008563884.1 803570 D 1335916 CDS YP_008563885.1 544389483 16978426 804220..805152 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 805152 16978426 LY180_03765 Escherichia coli LY180 hypothetical protein YP_008563885.1 804220 D 1335916 CDS YP_008563886.1 544389484 16978427 805142..805876 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LamB/YcsF family protein 805876 16978427 LY180_03770 Escherichia coli LY180 LamB/YcsF family protein YP_008563886.1 805142 D 1335916 CDS YP_008563887.1 544389485 16978428 805912..806703 1 NC_022364.1 5-formyluracil/5-hydroxymethyluracil DNA glycosylase; involved in base excision repair of DNA damaged by oxidation or by mutagenic agents; acts as DNA glycosylase that recognizes and removes damaged bases with a preference for oxidized pyrimidines; has apurinic/apyrimidinic lyase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.; endoribonuclease SymE 806703 16978428 LY180_03775 Escherichia coli LY180 endoribonuclease SymE YP_008563887.1 805912 D 1335916 CDS YP_008563888.1 544389486 16978429 complement(806700..807746) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; AbrB family transcriptional regulator 807746 16978429 LY180_03780 Escherichia coli LY180 AbrB family transcriptional regulator YP_008563888.1 806700 R 1335916 CDS YP_008563889.1 544389487 16978430 complement(807898..808959) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 808959 16978430 LY180_03785 Escherichia coli LY180 hypothetical protein YP_008563889.1 807898 R 1335916 CDS YP_008563890.1 544389488 16978431 complement(808956..809687) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein 809687 16978431 LY180_03790 Escherichia coli LY180 fimbrial protein YP_008563890.1 808956 R 1335916 CDS YP_008563891.1 544389489 16978432 complement(809702..812152) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 812152 16978432 LY180_03795 Escherichia coli LY180 membrane protein YP_008563891.1 809702 R 1335916 CDS YP_008563892.1 544389490 16978433 complement(812212..812778) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein 812778 16978433 LY180_03800 Escherichia coli LY180 fimbrial protein YP_008563892.1 812212 R 1335916 CDS YP_008563893.1 544389491 16978434 complement(813169..814452) 1 NC_022364.1 type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; Derived by automated computational analysis using gene prediction method: Protein Homology.; type II citrate synthase 814452 gltA 16978434 gltA Escherichia coli LY180 type II citrate synthase YP_008563893.1 813169 R 1335916 CDS YP_008563894.1 544389492 16978435 815146..815550 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; succinate dehydrogenase cytochrome b556 large membrane subunit 815550 sdhC 16978435 sdhC Escherichia coli LY180 succinate dehydrogenase cytochrome b556 large membrane subunit YP_008563894.1 815146 D 1335916 CDS YP_008563895.1 544389493 16978436 815544..815891 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; succinate dehydrogenase cytochrome b556 small membrane subunit 815891 sdhD 16978436 sdhD Escherichia coli LY180 succinate dehydrogenase cytochrome b556 small membrane subunit YP_008563895.1 815544 D 1335916 CDS YP_008563896.1 544389494 16978437 815891..817657 1 NC_022364.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; Derived by automated computational analysis using gene prediction method: Protein Homology.; succinate dehydrogenase flavoprotein subunit 817657 sdhA 16978437 sdhA Escherichia coli LY180 succinate dehydrogenase flavoprotein subunit YP_008563896.1 815891 D 1335916 CDS YP_008563897.1 544389495 16978438 817673..818389 1 NC_022364.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.; succinate dehydrogenase iron-sulfur subunit 818389 sdhB 16978438 sdhB Escherichia coli LY180 succinate dehydrogenase iron-sulfur subunit YP_008563897.1 817673 D 1335916 CDS YP_008563898.1 544389496 16978439 818590..821391 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-oxoglutarate dehydrogenase E1 821391 16978439 LY180_03830 Escherichia coli LY180 2-oxoglutarate dehydrogenase E1 YP_008563898.1 818590 D 1335916 CDS YP_008563899.1 544389497 16978440 821406..822623 1 NC_022364.1 component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.; dihydrolipoamide succinyltransferase 822623 16978440 LY180_03835 Escherichia coli LY180 dihydrolipoamide succinyltransferase YP_008563899.1 821406 D 1335916 CDS YP_008563900.1 544389498 16978441 822717..823883 1 NC_022364.1 catalyzes the interconversion of succinyl-CoA and succinate; Derived by automated computational analysis using gene prediction method: Protein Homology.; malate--CoA ligase subunit beta 823883 sucC 16978441 sucC Escherichia coli LY180 malate--CoA ligase subunit beta YP_008563900.1 822717 D 1335916 CDS YP_008563901.1 544389499 16978442 823883..824752 1 NC_022364.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle; Derived by automated computational analysis using gene prediction method: Protein Homology.; succinyl-CoA synthetase subunit alpha 824752 16978442 LY180_03845 Escherichia coli LY180 succinyl-CoA synthetase subunit alpha YP_008563901.1 823883 D 1335916 CDS YP_008563902.1 544389500 16978443 complement(824856..825578) 1 NC_022364.1 regulates the succiny-lCoA synthetase operon; Derived by automated computational analysis using gene prediction method: Protein Homology.; XRE family transcriptional regulator 825578 16978443 LY180_03850 Escherichia coli LY180 XRE family transcriptional regulator YP_008563902.1 824856 R 1335916 CDS YP_008563903.1 544389501 16978444 825747..827663 1 NC_022364.1 FrwB with FrwC, FrwD and PtsA forms a PEP-dependent sugar phosphotransferase system (PTS) permease which may phosphorylate and transport sugars into the cell; cytoplasmic protein that interacts with complex EIIA; contains the second phosphorylation site of the PTS; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS fructose transporter subunit IIB 827663 16978444 LY180_03855 Escherichia coli LY180 PTS fructose transporter subunit IIB YP_008563903.1 825747 D 1335916 CDS YP_008563904.1 544389502 16978445 827681..830314 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; alpha-mannosidase 830314 16978445 LY180_03860 Escherichia coli LY180 alpha-mannosidase YP_008563904.1 827681 D 1335916 CDS YP_008563905.1 544389503 16978446 831161..832729 1 NC_022364.1 part of the aerobic respiratory chain; catalyzes the ubiquinol to ubiquinone; Derived by automated computational analysis using gene prediction method: Protein Homology.; cytochrome BD oxidase subunit I 832729 16978446 LY180_03865 Escherichia coli LY180 cytochrome BD oxidase subunit I YP_008563905.1 831161 D 1335916 CDS YP_008563906.1 544389504 16978447 832745..833884 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cytochrome BD oxidase subunit II 833884 16978447 LY180_03870 Escherichia coli LY180 cytochrome BD oxidase subunit II YP_008563906.1 832745 D 1335916 CDS YP_008563907.1 544389505 16978448 833899..834012 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 834012 16978448 LY180_03875 Escherichia coli LY180 hypothetical protein YP_008563907.1 833899 D 1335916 CDS YP_008563908.1 544389506 16978449 834012..834305 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 834305 16978449 LY180_03880 Escherichia coli LY180 hypothetical protein YP_008563908.1 834012 D 1335916 CDS YP_008563909.1 544389507 16978450 834455..834859 1 NC_022364.1 catalyzes the hydrolysis of short chain aliphatic acyl-CoA thioesters; physiological role remains unknown; involved in phospholipid metabolism; part of the Tol/Pal system of proteins that are critical for maintaining the integrity of the cell envelope components; Derived by automated computational analysis using gene prediction method: Protein Homology.; acyl-CoA thioesterase 834859 16978450 LY180_03885 Escherichia coli LY180 acyl-CoA thioesterase YP_008563909.1 834455 D 1335916 CDS YP_008563910.1 544389508 16978451 834856..835548 1 NC_022364.1 membrane spanning protein in TolA-TolQ-TolR complex; involved in the tonB-independent uptake of group A colicins; Derived by automated computational analysis using gene prediction method: Protein Homology.; colicin transporter 835548 16978451 LY180_03890 Escherichia coli LY180 colicin transporter YP_008563910.1 834856 D 1335916 CDS YP_008563911.1 544389509 16978452 835552..835980 1 NC_022364.1 membrane spanning protein in TolA-TolQ-TolR complex; involved in the tonB-independent uptake of group A colicins; Derived by automated computational analysis using gene prediction method: Protein Homology.; colicin transporter 835980 16978452 LY180_03895 Escherichia coli LY180 colicin transporter YP_008563911.1 835552 D 1335916 CDS YP_008563912.1 544389510 16978453 836045..837310 1 NC_022364.1 inner membrane component of 7 member Tol-Pal envelope-spanning complex; involved in maintaining cell envelope integrity; utilized by colicins and filamentous phages for import; interacts with TolB, Pal, and through TolB to various outer membrane porins; Derived by automated computational analysis using gene prediction method: Protein Homology.; cell envelope integrity inner membrane protein TolA 837310 tolA 16978453 tolA Escherichia coli LY180 cell envelope integrity inner membrane protein TolA YP_008563912.1 836045 D 1335916 CDS YP_008563913.1 544389511 16978454 837443..838735 1 NC_022364.1 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; Derived by automated computational analysis using gene prediction method: Protein Homology.; translocation protein TolB 838735 tolB 16978454 tolB Escherichia coli LY180 translocation protein TolB YP_008563913.1 837443 D 1335916 CDS YP_008563914.1 544389512 16978455 838770..839291 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidoglycan-associated outer membrane lipoprotein 839291 16978455 LY180_03910 Escherichia coli LY180 peptidoglycan-associated outer membrane lipoprotein YP_008563914.1 838770 D 1335916 CDS YP_008563915.1 544389513 16978456 839301..840092 1 NC_022364.1 periplasmic protein that interacts with TolA; the tol-pal system is probably involved in maintaining cell envelope integrity; Derived by automated computational analysis using gene prediction method: Protein Homology.; tol-pal system protein YbgF 840092 16978456 LY180_03915 Escherichia coli LY180 tol-pal system protein YbgF YP_008563915.1 839301 D 1335916 CDS YP_008563916.1 544389514 16978464 841661..842704 1 NC_022364.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; quinolinate synthetase 842704 16978464 LY180_03955 Escherichia coli LY180 quinolinate synthetase YP_008563916.1 841661 D 1335916 CDS YP_008563917.1 544389515 16978465 842742..843461 1 NC_022364.1 involved in nicotinamide riboside transport; Derived by automated computational analysis using gene prediction method: Protein Homology.; nicotinamide riboside transporter PnuC 843461 16978465 LY180_03960 Escherichia coli LY180 nicotinamide riboside transporter PnuC YP_008563917.1 842742 D 1335916 CDS YP_008563918.1 544389516 16978466 complement(843458..844399) 1 NC_022364.1 involved in zinc efflux across the cytoplasmic membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; zinc transporter ZitB 844399 16978466 LY180_03965 Escherichia coli LY180 zinc transporter ZitB YP_008563918.1 843458 R 1335916 CDS YP_008563919.1 544389517 16978467 complement(844513..844893) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 844893 16978467 LY180_03970 Escherichia coli LY180 hypothetical protein YP_008563919.1 844513 R 1335916 CDS YP_008563920.1 544389518 16978468 845209..846261 1 NC_022364.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; Derived by automated computational analysis using gene prediction method: Protein Homology.; phospho-2-dehydro-3-deoxyheptonate aldolase 846261 16978468 LY180_03975 Escherichia coli LY180 phospho-2-dehydro-3-deoxyheptonate aldolase YP_008563920.1 845209 D 1335916 CDS YP_008563921.1 544389519 16978469 complement(846419..847171) 1 NC_022364.1 2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoglyceromutase 847171 gpmA 16978469 gpmA Escherichia coli LY180 phosphoglyceromutase YP_008563921.1 846419 R 1335916 CDS YP_008563922.1 544389520 16978470 complement(847376..848416) 1 NC_022364.1 mutarotase; catalyzes the conversion of beta-galactose to the alpha-anomer; links the metabolism of lactose and galactose; Derived by automated computational analysis using gene prediction method: Protein Homology.; galactose-1-epimerase 848416 galM 16978470 galM Escherichia coli LY180 galactose-1-epimerase YP_008563922.1 847376 R 1335916 CDS YP_008563923.1 544389521 16978471 complement(848410..849558) 1 NC_022364.1 catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.; galactokinase 849558 16978471 LY180_03990 Escherichia coli LY180 galactokinase YP_008563923.1 848410 R 1335916 CDS YP_008563924.1 544389522 16978472 complement(849562..850608) 1 NC_022364.1 catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P; Derived by automated computational analysis using gene prediction method: Protein Homology.; galactose-1-phosphate uridylyltransferase 850608 16978472 LY180_03995 Escherichia coli LY180 galactose-1-phosphate uridylyltransferase YP_008563924.1 849562 R 1335916 CDS YP_008563925.1 544389523 16978473 complement(850618..851634) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP-galactose-4-epimerase 851634 16978473 LY180_04000 Escherichia coli LY180 UDP-galactose-4-epimerase YP_008563925.1 850618 R 1335916 CDS YP_008563926.1 544389524 16978474 complement(851897..853369) 1 NC_022364.1 contains 2 ATP-binding cassettes; involved in the transport of molybdenum; Derived by automated computational analysis using gene prediction method: Protein Homology.; molybdenum ABC transporter ATP-binding protein 853369 16978474 LY180_04005 Escherichia coli LY180 molybdenum ABC transporter ATP-binding protein YP_008563926.1 851897 R 1335916 CDS YP_008563927.1 544389525 16978475 complement(853437..854225) 1 NC_022364.1 represses the modABCD operon and activates the moaABCD and napFDAGHBC operons; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 854225 16978475 LY180_04010 Escherichia coli LY180 transcriptional regulator YP_008563927.1 853437 R 1335916 CDS YP_008563928.1 544389526 16978476 854354..854503 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 854503 16978476 LY180_04015 Escherichia coli LY180 membrane protein YP_008563928.1 854354 D 1335916 CDS YP_008563929.1 544389527 16978477 854670..855443 1 NC_022364.1 with ModCB is involved in the high-affinity transport of molybdate; Derived by automated computational analysis using gene prediction method: Protein Homology.; molybdenum ABC transporter substrate-binding protein 855443 modA 16978477 modA Escherichia coli LY180 molybdenum ABC transporter substrate-binding protein YP_008563929.1 854670 D 1335916 CDS YP_008563930.1 544389528 16978478 855443..856132 1 NC_022364.1 part of ModCBA molybdate transporter; member of ABC superfamily; inner membrane component; regulated by repressor protein ModE; Derived by automated computational analysis using gene prediction method: Protein Homology.; molybdate ABC transporter permease 856132 modB 16978478 modB Escherichia coli LY180 molybdate ABC transporter permease YP_008563930.1 855443 D 1335916 CDS YP_008563931.1 544389529 16978479 856135..857193 1 NC_022364.1 Part of the ABC transporter complex modABC involved in molybdenum import; Derived by automated computational analysis using gene prediction method: Protein Homology.; molybdate ABC transporter ATP-binding protein 857193 modC 16978479 modC Escherichia coli LY180 molybdate ABC transporter ATP-binding protein YP_008563931.1 856135 D 1335916 CDS YP_008563932.1 544389530 16978480 complement(857194..858012) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; pyridoxal phosphate phosphatase 858012 16978480 LY180_04035 Escherichia coli LY180 pyridoxal phosphate phosphatase YP_008563932.1 857194 R 1335916 CDS YP_008563933.1 544389531 16978481 858167..859162 1 NC_022364.1 catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 6-phosphogluconolactonase 859162 16978481 LY180_04040 Escherichia coli LY180 6-phosphogluconolactonase YP_008563933.1 858167 D 1335916 CDS YP_008563934.1 544389532 16978482 complement(859203..860156) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LysR family transcriptional regulator 860156 16978482 LY180_04045 Escherichia coli LY180 LysR family transcriptional regulator YP_008563934.1 859203 R 1335916 CDS YP_008563935.1 544389533 16978483 860340..861392 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 861392 16978483 LY180_04050 Escherichia coli LY180 hypothetical protein YP_008563935.1 860340 D 1335916 CDS YP_008563936.1 544389534 16978484 861468..862901 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 862901 16978484 LY180_04055 Escherichia coli LY180 membrane protein YP_008563936.1 861468 D 1335916 CDS YP_008563937.1 544389535 16978485 863084..865345 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hydratase 865345 16978485 LY180_04060 Escherichia coli LY180 hydratase YP_008563937.1 863084 D 1335916 CDS YP_008563938.1 544389536 16978486 complement(865579..866862) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acyl-CoA thioesterase 866862 16978486 LY180_04065 Escherichia coli LY180 acyl-CoA thioesterase YP_008563938.1 865579 R 1335916 CDS YP_008563939.1 544389537 16978487 complement(867014..867490) 1 NC_022364.1 YbhB; similar to rat and human kinase inhibitory proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; kinase inhibitor protein 867490 16978487 LY180_04070 Escherichia coli LY180 kinase inhibitor protein YP_008563939.1 867014 R 1335916 CDS YP_008563940.1 544389538 16978488 complement(867549..868838) 1 NC_022364.1 catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate; Derived by automated computational analysis using gene prediction method: Protein Homology.; adenosylmethionine--8-amino-7-oxononanoate aminotransferase 868838 16978488 LY180_04075 Escherichia coli LY180 adenosylmethionine--8-amino-7-oxononanoate aminotransferase YP_008563940.1 867549 R 1335916 CDS YP_008563941.1 544389539 16978489 868925..869965 1 NC_022364.1 catalyzes the formation of biotin from dethiobiotin; Derived by automated computational analysis using gene prediction method: Protein Homology.; biotin synthase 869965 16978489 LY180_04080 Escherichia coli LY180 biotin synthase YP_008563941.1 868925 D 1335916 CDS YP_008563942.1 544389540 16978490 869962..871116 1 NC_022364.1 catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine; Derived by automated computational analysis using gene prediction method: Protein Homology.; 8-amino-7-oxononanoate synthase 871116 16978490 LY180_04085 Escherichia coli LY180 8-amino-7-oxononanoate synthase YP_008563942.1 869962 D 1335916 CDS YP_008563943.1 544389541 16978491 871103..871858 1 NC_022364.1 methyltransferase; acyl carrier protein involved in an unidentified step in the synthesis of pimeloyl-CoA, a biotin precursor; member of the bio operon (bioABFCD); in Escherichia coli, bioC-null mutants require biotin for growth; Derived by automated computational analysis using gene prediction method: Protein Homology.; biotin biosynthesis protein BioC 871858 16978491 LY180_04090 Escherichia coli LY180 biotin biosynthesis protein BioC YP_008563943.1 871103 D 1335916 CDS YP_008563944.1 544389542 16978492 871851..872528 1 NC_022364.1 DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; Derived by automated computational analysis using gene prediction method: Protein Homology.; dithiobiotin synthetase 872528 bioD 16978492 bioD Escherichia coli LY180 dithiobiotin synthetase YP_008563944.1 871851 D 1335916 CDS YP_008563945.1 544389543 16978493 873107..875128 1 NC_022364.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; Derived by automated computational analysis using gene prediction method: Protein Homology.; excinuclease ABC subunit B 875128 16978493 LY180_04100 Escherichia coli LY180 excinuclease ABC subunit B YP_008563945.1 873107 D 1335916 CDS YP_008563946.1 544389544 16978494 complement(875320..876228) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 876228 16978494 LY180_04105 Escherichia coli LY180 hypothetical protein YP_008563946.1 875320 R 1335916 CDS YP_008563947.1 544389545 16978495 876625..877614 1 NC_022364.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; Derived by automated computational analysis using gene prediction method: Protein Homology.; molybdenum cofactor biosynthesis protein A 877614 moaA 16978495 moaA Escherichia coli LY180 molybdenum cofactor biosynthesis protein A YP_008563947.1 876625 D 1335916 CDS YP_008563948.1 544389546 16978496 877636..878148 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; molybdopterin biosynthesis protein B 878148 16978496 LY180_04115 Escherichia coli LY180 molybdopterin biosynthesis protein B YP_008563948.1 877636 D 1335916 CDS YP_008563949.1 544389547 16978497 878151..878636 1 NC_022364.1 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; molybdenum cofactor biosynthesis protein MoaC 878636 moaC 16978497 moaC Escherichia coli LY180 molybdenum cofactor biosynthesis protein MoaC YP_008563949.1 878151 D 1335916 CDS YP_008563950.1 544389548 16978498 878629..878874 1 NC_022364.1 catalyzes the conversion of molybdopterin precursor Z into molybdopterin; Derived by automated computational analysis using gene prediction method: Protein Homology.; molybdopterin synthase small subunit 878874 moaD 16978498 moaD Escherichia coli LY180 molybdopterin synthase small subunit YP_008563950.1 878629 D 1335916 CDS YP_008563951.1 544389549 16978499 878876..879328 1 NC_022364.1 catalyzes the conversion of molybdopterin precursor Z into molybdopterin; Derived by automated computational analysis using gene prediction method: Protein Homology.; molybdopterin guanine dinucleotide biosynthesis protein MoaE 879328 moaE 16978499 moaE Escherichia coli LY180 molybdopterin guanine dinucleotide biosynthesis protein MoaE YP_008563951.1 878876 D 1335916 CDS YP_008563952.1 544389550 16978500 879465..880169 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 880169 16978500 LY180_04135 Escherichia coli LY180 membrane protein YP_008563952.1 879465 D 1335916 CDS YP_008563953.1 544389551 16978501 880374..881087 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 881087 16978501 LY180_04140 Escherichia coli LY180 hypothetical protein YP_008563953.1 880374 D 1335916 CDS YP_008563954.1 544389552 16978502 complement(881123..882079) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 882079 16978502 LY180_04145 Escherichia coli LY180 membrane protein YP_008563954.1 881123 R 1335916 CDS YP_008563955.1 544389553 16978503 complement(882079..883320) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cardiolipin synthase 2 883320 16978503 LY180_04150 Escherichia coli LY180 cardiolipin synthase 2 YP_008563955.1 882079 R 1335916 CDS YP_008563956.1 544389554 16978504 complement(883317..884078) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 884078 16978504 LY180_04155 Escherichia coli LY180 hypothetical protein YP_008563956.1 883317 R 1335916 CDS YP_008563957.1 544389555 16978505 884211..884621 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 884621 16978505 LY180_04160 Escherichia coli LY180 membrane protein YP_008563957.1 884211 D 1335916 CDS YP_008563958.1 544389556 16978506 complement(884583..885689) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 885689 16978506 LY180_04165 Escherichia coli LY180 membrane protein YP_008563958.1 884583 R 1335916 CDS YP_008563959.1 544389557 16978507 complement(885700..886833) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 886833 16978507 LY180_04170 Escherichia coli LY180 membrane protein YP_008563959.1 885700 R 1335916 CDS YP_008563960.1 544389558 16978508 complement(886826..888562) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug ABC transporter ATP-binding protein 888562 16978508 LY180_04175 Escherichia coli LY180 multidrug ABC transporter ATP-binding protein YP_008563960.1 886826 R 1335916 CDS YP_008563961.1 544389559 16978509 complement(888555..889553) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 889553 16978509 LY180_04180 Escherichia coli LY180 transporter YP_008563961.1 888555 R 1335916 CDS YP_008563962.1 544389560 16978510 complement(889553..890236) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 890236 16978510 LY180_04185 Escherichia coli LY180 transcriptional regulator YP_008563962.1 889553 R 1335916 CDS YP_008563963.1 544389561 16978511 890453..891817 1 NC_022364.1 this helicase is not essential cell growth; Derived by automated computational analysis using gene prediction method: Protein Homology.; RNA helicase 891817 16978511 LY180_04190 Escherichia coli LY180 RNA helicase YP_008563963.1 890453 D 1335916 CDS YP_008563964.1 544392881 16978512 891824..891919 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 891919 16978512 LY180_04195 Escherichia coli LY180 hypothetical protein YP_008563964.1 891824 D 1335916 CDS YP_008563965.1 544389562 16978514 complement(892049..892531) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Swarming motility protein ybiA 892531 16978514 LY180_04205 Escherichia coli LY180 Swarming motility protein ybiA YP_008563965.1 892049 R 1335916 CDS YP_008563966.1 544389563 16978515 892543..894801 1 NC_022364.1 helicase involved in DNA repair and perhaps also replication; Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-dependent DNA helicase DinG 894801 dinG 16978515 dinG Escherichia coli LY180 ATP-dependent DNA helicase DinG YP_008563966.1 892543 D 1335916 CDS YP_008563967.1 544389564 16978516 894829..895791 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glycosyl transferase 895791 16978516 LY180_04215 Escherichia coli LY180 glycosyl transferase YP_008563967.1 894829 D 1335916 CDS YP_008563968.1 544389565 16978517 895932..897017 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; dehydrogenase 897017 16978517 LY180_04220 Escherichia coli LY180 dehydrogenase YP_008563968.1 895932 D 1335916 CDS YP_008563969.1 544389566 16978518 complement(897246..897506) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 897506 16978518 LY180_04225 Escherichia coli LY180 hypothetical protein YP_008563969.1 897246 R 1335916 CDS YP_008563970.1 544389567 16978519 complement(897771..898037) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 898037 16978519 LY180_04230 Escherichia coli LY180 hypothetical protein YP_008563970.1 897771 R 1335916 CDS YP_008563971.1 544389568 16978520 complement(898111..898788) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Fe(II)-dependent oxygenase 898788 16978520 LY180_04235 Escherichia coli LY180 Fe(II)-dependent oxygenase YP_008563971.1 898111 R 1335916 CDS YP_008563972.1 544389569 16978521 complement(898830..901112) 1 NC_022364.1 Fiu; YbiL; porin involved in the uptake of iron complexed with catecholate siderophores (e.g. dihydroxybenzoylserine, dihydroxybenzoate) and beta lactam agents; Fiu interacts with TonB which provides the energy required for transport across the outer membrane; acts as a receptor for iron-siderophores and microcins E492, M, and H47; outer membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; catecholate siderophore receptor Fiu 901112 16978521 LY180_04240 Escherichia coli LY180 catecholate siderophore receptor Fiu YP_008563972.1 898830 R 1335916 CDS YP_008563973.1 544389570 16978522 complement(901377..901637) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 901637 16978522 LY180_04245 Escherichia coli LY180 hypothetical protein YP_008563973.1 901377 R 1335916 CDS YP_008563974.1 544389571 16978523 901913..902839 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 23S rRNA methyltransferase 902839 16978523 LY180_04250 Escherichia coli LY180 23S rRNA methyltransferase YP_008563974.1 901913 D 1335916 CDS YP_008563975.1 544389572 16978524 complement(902836..905061) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; mechanosensitive channel protein 905061 16978524 LY180_04255 Escherichia coli LY180 mechanosensitive channel protein YP_008563975.1 902836 R 1335916 CDS YP_008563976.1 544392882 16978525 905060..905161 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 905161 16978525 LY180_04260 Escherichia coli LY180 hypothetical protein YP_008563976.1 905060 D 1335916 CDS YP_008563977.1 544389573 16978526 complement(905178..905900) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; histidine ABC transporter ATP-binding protein 905900 16978526 LY180_04265 Escherichia coli LY180 histidine ABC transporter ATP-binding protein YP_008563977.1 905178 R 1335916 CDS YP_008563978.1 544389574 16978527 complement(905897..906556) 1 NC_022364.1 similar to permease component of ABC transporters; mutations impair ability of Escherichia coli to transport and utilize glutamine; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutamine ABC transporter permease 906556 glnP 16978527 glnP Escherichia coli LY180 glutamine ABC transporter permease YP_008563978.1 905897 R 1335916 CDS YP_008563979.1 544389575 16978528 complement(906695..907441) 1 NC_022364.1 similar to periplasmic-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology.; amino acid ABC transporter substrate-binding protein 907441 glnH 16978528 glnH Escherichia coli LY180 amino acid ABC transporter substrate-binding protein YP_008563979.1 906695 R 1335916 CDS YP_008563980.1 544389576 16978529 complement(907845..908348) 1 NC_022364.1 binds DNA in a non-sequence-specific manner and is abundant during stationary phase; forms a DNA-protein crystal that protects DNA from damage; required for normal starvation response and long-term stationary viability; forms a homododecameric complex and sequesters iron which provides protection against oxidative damage; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA starvation/stationary phase protection protein Dps 908348 16978529 LY180_04280 Escherichia coli LY180 DNA starvation/stationary phase protection protein Dps YP_008563980.1 907845 R 1335916 CDS YP_008563981.1 544389577 16978530 complement(908647..909534) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; threonine transporter RhtB 909534 16978530 LY180_04285 Escherichia coli LY180 threonine transporter RhtB YP_008563981.1 908647 R 1335916 CDS YP_008563982.1 544389578 16978531 909887..910402 1 NC_022364.1 OmpX; involved in cell adhesion; forms an eight-stranded antiparallel beta-barrel that protrudes from the cell surface; mutations in the gene increase cell-surface contact in fimbriated strains but decrease contact in nonfimbriated strains; Derived by automated computational analysis using gene prediction method: Protein Homology.; outer membrane protein X 910402 ompX 16978531 ompX Escherichia coli LY180 outer membrane protein X YP_008563982.1 909887 D 1335916 CDS YP_008563983.1 544389579 16978532 complement(910451..912034) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoethanolamine transferase 912034 16978532 LY180_04295 Escherichia coli LY180 phosphoethanolamine transferase YP_008563983.1 910451 R 1335916 CDS YP_008563984.1 544392883 16978533 complement(912306..912413) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 912413 16978533 LY180_04300 Escherichia coli LY180 hypothetical protein YP_008563984.1 912306 R 1335916 CDS YP_008563985.1 544389580 16978534 912620..913087 1 NC_022364.1 Transcriptional regulator that represses the manganese transporter MntH when manganese is present; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 913087 16978534 LY180_04305 Escherichia coli LY180 transcriptional regulator YP_008563985.1 912620 D 1335916 CDS YP_008563986.1 544389581 16978535 913084..914202 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 914202 16978535 LY180_04310 Escherichia coli LY180 membrane protein YP_008563986.1 913084 D 1335916 CDS YP_008563987.1 544389582 16978536 complement(914261..915181) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; L,D-transpeptidase 915181 16978536 LY180_04315 Escherichia coli LY180 L,D-transpeptidase YP_008563987.1 914261 R 1335916 CDS YP_008563988.1 544389583 16978537 915400..916992 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; heme ABC transporter ATP-binding protein 916992 16978537 LY180_04320 Escherichia coli LY180 heme ABC transporter ATP-binding protein YP_008563988.1 915400 D 1335916 CDS YP_008563989.1 544392884 16978538 917271..918251 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 918251 16978538 LY180_04325 Escherichia coli LY180 hypothetical protein YP_008563989.1 917271 D 1335916 CDS YP_008563990.1 544389584 16978539 complement(918507..919772) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 919772 16978539 LY180_04330 Escherichia coli LY180 hypothetical protein YP_008563990.1 918507 R 1335916 CDS YP_008563991.1 544389585 16978540 complement(919924..920739) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar phosphatase 920739 16978540 LY180_04335 Escherichia coli LY180 sugar phosphatase YP_008563991.1 919924 R 1335916 CDS YP_008563992.1 544389586 16978541 complement(920885..923317) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; formate acetyltransferase 923317 16978541 LY180_04340 Escherichia coli LY180 formate acetyltransferase YP_008563992.1 920885 R 1335916 CDS YP_008563993.1 544389587 16978542 complement(923323..924222) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; pyruvate formate-lyase 3-activating protein 924222 16978542 LY180_04345 Escherichia coli LY180 pyruvate formate-lyase 3-activating protein YP_008563993.1 923323 R 1335916 CDS YP_008563994.1 544389588 16978543 924353..925015 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fructose-bisphosphate aldolase 925015 16978543 LY180_04350 Escherichia coli LY180 fructose-bisphosphate aldolase YP_008563994.1 924353 D 1335916 CDS YP_008563995.1 544389589 16978544 complement(925091..925840) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; molybdopterin-synthase adenylyltransferase 925840 16978544 LY180_04355 Escherichia coli LY180 molybdopterin-synthase adenylyltransferase YP_008563995.1 925091 R 1335916 CDS YP_008563996.1 544389590 16978545 complement(925840..927075) 1 NC_022364.1 is involved in the formation of active molybdenum cofactor and the chelation of molybdenum; Derived by automated computational analysis using gene prediction method: Protein Homology.; molybdopterin biosynthesis protein MoeA 927075 16978545 LY180_04360 Escherichia coli LY180 molybdopterin biosynthesis protein MoeA YP_008563996.1 925840 R 1335916 CDS YP_008563997.1 544389591 16978546 927279..928244 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; isoaspartyl peptidase 928244 16978546 LY180_04365 Escherichia coli LY180 isoaspartyl peptidase YP_008563997.1 927279 D 1335916 CDS YP_008563998.1 544389592 16978547 928231..930102 1 NC_022364.1 with GsiBCD is involved in glutathione import; GsiA contains 2 ATP-binding domains; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutathione ABC transporter ATP-binding protein 930102 16978547 LY180_04370 Escherichia coli LY180 glutathione ABC transporter ATP-binding protein YP_008563998.1 928231 D 1335916 CDS YP_008563999.1 544389593 16978548 930122..931660 1 NC_022364.1 with GsiACD is involved in the transport of glutathione into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutathione ABC transporter substrate-binding protein GsiB 931660 16978548 LY180_04375 Escherichia coli LY180 glutathione ABC transporter substrate-binding protein GsiB YP_008563999.1 930122 D 1335916 CDS YP_008564000.1 544389594 16978549 931678..932598 1 NC_022364.1 with GsiABD is involved in the transport of glutathione into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutathione ABC transporter permease 932598 16978549 LY180_04380 Escherichia coli LY180 glutathione ABC transporter permease YP_008564000.1 931678 D 1335916 CDS YP_008564001.1 544389595 16978550 932601..933512 1 NC_022364.1 with GsiABD is involved in the transport of glutathione into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutathione ABC transporter permease GsiD 933512 16978550 LY180_04385 Escherichia coli LY180 glutathione ABC transporter permease GsiD YP_008564001.1 932601 D 1335916 CDS YP_008564002.1 544389596 16978551 933612..936038 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cyclic di-GMP phosphodiesterase 936038 16978551 LY180_04390 Escherichia coli LY180 cyclic di-GMP phosphodiesterase YP_008564002.1 933612 D 1335916 CDS YP_008564003.1 544389597 16978552 936046..937374 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 937374 16978552 LY180_04395 Escherichia coli LY180 hypothetical protein YP_008564003.1 936046 D 1335916 CDS YP_008564004.1 544389598 16978553 complement(937421..938746) 1 NC_022364.1 catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribosomal protein S12 methylthiotransferase 938746 rimO 16978553 rimO Escherichia coli LY180 ribosomal protein S12 methylthiotransferase YP_008564004.1 937421 R 1335916 CDS YP_008564005.1 544389599 16978554 938959..939342 1 NC_022364.1 BssS; regulator of biofilm through signal secretion; disruption of this gene in Escherichia coli led to effects on biofilm formation, alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing; Derived by automated computational analysis using gene prediction method: Protein Homology.; biofilm formation regulatory protein BssR 939342 bssR 16978554 bssR Escherichia coli LY180 biofilm formation regulatory protein BssR YP_008564005.1 938959 D 1335916 CDS YP_008564006.1 544389600 16978555 939453..940568 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; aldose dehydrogenase 940568 16978555 LY180_04410 Escherichia coli LY180 aldose dehydrogenase YP_008564006.1 939453 D 1335916 CDS YP_008564007.1 544389601 16978556 complement(940565..941191) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glutathione S-transferase 941191 16978556 LY180_04415 Escherichia coli LY180 glutathione S-transferase YP_008564007.1 940565 R 1335916 CDS YP_008564008.1 544389602 16978557 941429..942640 1 NC_022364.1 penicillin-binding protein 5; removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors; Derived by automated computational analysis using gene prediction method: Protein Homology.; D-alanyl-D-alanine carboxypeptidase 942640 16978557 LY180_04420 Escherichia coli LY180 D-alanyl-D-alanine carboxypeptidase YP_008564008.1 941429 D 1335916 CDS YP_008564009.1 544389603 16978558 complement(942687..943445) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 943445 16978558 LY180_04425 Escherichia coli LY180 transcriptional regulator YP_008564009.1 942687 R 1335916 CDS YP_008564010.1 544389604 16978559 complement(943503..944099) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP pyrophosphate phosphatase 944099 16978559 LY180_04430 Escherichia coli LY180 UDP pyrophosphate phosphatase YP_008564010.1 943503 R 1335916 CDS YP_008564011.1 544389605 16978560 944384..945616 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug transporter 945616 16978560 LY180_04435 Escherichia coli LY180 multidrug transporter YP_008564011.1 944384 D 1335916 CDS YP_008564012.1 544389606 16978561 complement(945657..945941) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 945941 16978561 LY180_04440 Escherichia coli LY180 hypothetical protein YP_008564012.1 945657 R 1335916 CDS YP_008564013.1 544389607 16978562 complement(946027..946842) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar phosphatase SupH 946842 16978562 LY180_04445 Escherichia coli LY180 sugar phosphatase SupH YP_008564013.1 946027 R 1335916 CDS YP_008564014.1 544389608 16978563 complement(946842..948050) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 948050 16978563 LY180_04450 Escherichia coli LY180 membrane protein YP_008564014.1 946842 R 1335916 CDS YP_008564015.1 544389609 16978564 948134..948670 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DeoR family transcriptional regulator 948670 16978564 LY180_04455 Escherichia coli LY180 DeoR family transcriptional regulator YP_008564015.1 948134 D 1335916 CDS YP_008564016.1 544389610 16978565 complement(948845..950530) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 950530 16978565 LY180_04460 Escherichia coli LY180 transporter YP_008564016.1 948845 R 1335916 CDS YP_008564017.1 544389611 16978566 950800..951177 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 951177 16978566 LY180_04465 Escherichia coli LY180 membrane protein YP_008564017.1 950800 D 1335916 CDS YP_008564018.1 544389612 16978567 complement(951207..951464) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glutaredoxin 951464 16978567 LY180_04470 Escherichia coli LY180 glutaredoxin YP_008564018.1 951207 R 1335916 CDS YP_008564019.1 544389613 16978568 951624..951911 1 NC_022364.1 YbjC; located in the same operon as the nfsA gene; member of the soxRS regulon which mediates in part the increased levels of superoxide in response to oxidative stress; induced by paraquat; regulated by SoxS; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 951911 16978568 LY180_04475 Escherichia coli LY180 hypothetical protein YP_008564019.1 951624 D 1335916 CDS YP_008564020.1 544389614 16978569 951895..952617 1 NC_022364.1 NADPH-dependent; oxygen-insensitive; catalyzes the reduction of nitroaromatic compounds; Derived by automated computational analysis using gene prediction method: Protein Homology.; nitroreductase A 952617 16978569 LY180_04480 Escherichia coli LY180 nitroreductase A YP_008564020.1 951895 D 1335916 CDS YP_008564021.1 544389615 16978570 952678..953580 1 NC_022364.1 responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribosomal protein S6 modification protein 953580 16978570 LY180_04485 Escherichia coli LY180 ribosomal protein S6 modification protein YP_008564021.1 952678 D 1335916 CDS YP_008564022.1 544389616 16978571 953668..954144 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 954144 16978571 LY180_04490 Escherichia coli LY180 hypothetical protein YP_008564022.1 953668 D 1335916 CDS YP_008564023.1 544389617 16978572 954495..955607 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; putrescine/spermidine ABC transporter substrate-binding protein 955607 16978572 LY180_04495 Escherichia coli LY180 putrescine/spermidine ABC transporter substrate-binding protein YP_008564023.1 954495 D 1335916 CDS YP_008564024.1 544389618 16978573 955702..956835 1 NC_022364.1 functions together with PotBCD (A2BCD) in ATP-dependent polyamine transport; PotA is the membrane-associated ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.; putrescine/spermidine ABC transporter ATPase 956835 potA 16978573 potA Escherichia coli LY180 putrescine/spermidine ABC transporter ATPase YP_008564024.1 955702 D 1335916 CDS YP_008564025.1 544389619 16978574 956845..957798 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; putrescine/spermidine ABC transporter permease 957798 16978574 LY180_04505 Escherichia coli LY180 putrescine/spermidine ABC transporter permease YP_008564025.1 956845 D 1335916 CDS YP_008564026.1 544389620 16978575 957795..958640 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; putrescine/spermidine ABC transporter permease 958640 16978575 LY180_04510 Escherichia coli LY180 putrescine/spermidine ABC transporter permease YP_008564026.1 957795 D 1335916 CDS YP_008564027.1 544389621 16978576 958700..959188 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 959188 16978576 LY180_04515 Escherichia coli LY180 membrane protein YP_008564027.1 958700 D 1335916 CDS YP_008564028.1 544389622 16978577 959229..960356 1 NC_022364.1 RNA uridine methyltransferase B; catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; 23S rRNA methyltransferase 960356 rumB 16978577 rumB Escherichia coli LY180 23S rRNA methyltransferase YP_008564028.1 959229 D 1335916 CDS YP_008564029.1 544389623 16982301 complement(960531..961262) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; arginine ABC transporter substrate-binding protein 961262 16982301 LY180_04525 Escherichia coli LY180 arginine ABC transporter substrate-binding protein YP_008564029.1 960531 R 1335916 CDS YP_008564030.1 544389624 16978579 complement(961554..962222) 1 NC_022364.1 with ArtPQJI acts to transport arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; arginine transporter permease subunit ArtM 962222 artM 16978579 artM Escherichia coli LY180 arginine transporter permease subunit ArtM YP_008564030.1 961554 R 1335916 CDS YP_008564031.1 544389625 16978580 complement(962222..962938) 1 NC_022364.1 with ArtPMJI transports arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; arginine transporter permease subunit ArtQ 962938 16978580 LY180_04535 Escherichia coli LY180 arginine transporter permease subunit ArtQ YP_008564031.1 962222 R 1335916 CDS YP_008564032.1 544389626 16978581 complement(962945..963676) 1 NC_022364.1 with ArtPMQI is involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology.; arginine ABC transporter substrate-binding protein 963676 16978581 LY180_04540 Escherichia coli LY180 arginine ABC transporter substrate-binding protein YP_008564032.1 962945 R 1335916 CDS YP_008564033.1 544389627 16978582 complement(963694..964422) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; histidine ABC transporter ATP-binding protein 964422 16978582 LY180_04545 Escherichia coli LY180 histidine ABC transporter ATP-binding protein YP_008564033.1 963694 R 1335916 CDS YP_008564034.1 544389628 16978583 complement(964640..965155) 1 NC_022364.1 induced during stationary phase and by acivicin (a glutamine analog); regulated by Lrp and RpoS; Derived by automated computational analysis using gene prediction method: Protein Homology.; lipoprotein 965155 16978583 LY180_04550 Escherichia coli LY180 lipoprotein YP_008564034.1 964640 R 1335916 CDS YP_008564035.1 544389629 16978584 965281..965604 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 965604 16978584 LY180_04555 Escherichia coli LY180 hypothetical protein YP_008564035.1 965281 D 1335916 CDS YP_008564036.1 544389630 16978585 965601..966431 1 NC_022364.1 catalyzes the cleavage of the bond between muamic acid and l-alanine; Derived by automated computational analysis using gene prediction method: Protein Homology.; N-acetylmuramoyl-L-alanine amidase 966431 16978585 LY180_04560 Escherichia coli LY180 N-acetylmuramoyl-L-alanine amidase YP_008564036.1 965601 D 1335916 CDS YP_008564037.1 544389631 16978586 complement(966428..967477) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 967477 16978586 LY180_04565 Escherichia coli LY180 hypothetical protein YP_008564037.1 966428 R 1335916 CDS YP_008564038.1 544389632 16978587 complement(967540..968970) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 968970 16978587 LY180_04570 Escherichia coli LY180 hypothetical protein YP_008564038.1 967540 R 1335916 CDS YP_008564039.1 544389633 16978588 complement(968981..969982) 1 NC_022364.1 low- specificity; catalyzes the formation of acetaldehyde and glycine from L-threonine; acts on L-threonine, L-allo-threonine, L-threo-phenylserine, and L-erythro-phenylserine; Derived by automated computational analysis using gene prediction method: Protein Homology.; threonine aldolase 969982 16978588 LY180_04575 Escherichia coli LY180 threonine aldolase YP_008564039.1 968981 R 1335916 CDS YP_008564040.1 544389634 16978589 complement(970019..971737) 1 NC_022364.1 catalyzes the formation of acetate from pyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology.; pyruvate dehydrogenase 971737 16978589 LY180_04580 Escherichia coli LY180 pyruvate dehydrogenase YP_008564040.1 970019 R 1335916 CDS YP_008564041.1 544389635 16978590 complement(971870..972838) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase 972838 16978590 LY180_04585 Escherichia coli LY180 oxidoreductase YP_008564041.1 971870 R 1335916 CDS YP_008564042.1 544389636 16978591 complement(972850..974502) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hydroxylamine reductase 974502 16978591 LY180_04590 Escherichia coli LY180 hydroxylamine reductase YP_008564042.1 972850 R 1335916 CDS YP_008564043.1 544389637 16978592 complement(974646..975545) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 975545 16978592 LY180_04595 Escherichia coli LY180 membrane protein YP_008564043.1 974646 R 1335916 CDS YP_008564044.1 544392885 16978593 975954..976043 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 976043 16978593 LY180_04600 Escherichia coli LY180 hypothetical protein YP_008564044.1 975954 D 1335916 CDS YP_008564045.1 544389638 16978594 complement(976040..976735) 1 NC_022364.1 porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure; Derived by automated computational analysis using gene prediction method: Protein Homology.; aquaporin Z 976735 16978594 LY180_04605 Escherichia coli LY180 aquaporin Z YP_008564045.1 976040 R 1335916 CDS YP_008564046.1 544389639 16978595 977161..978819 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 978819 16978595 LY180_04610 Escherichia coli LY180 hypothetical protein YP_008564046.1 977161 D 1335916 CDS YP_008564047.1 544389640 16978596 complement(978816..979808) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 979808 16978596 LY180_04615 Escherichia coli LY180 hypothetical protein YP_008564047.1 978816 R 1335916 CDS YP_008564048.1 544389641 16978597 979923..981038 1 NC_022364.1 confers macrolide resistance via active drug efflux; Derived by automated computational analysis using gene prediction method: Protein Homology.; macrolide transporter subunit MacA 981038 16978597 LY180_04620 Escherichia coli LY180 macrolide transporter subunit MacA YP_008564048.1 979923 D 1335916 CDS YP_008564049.1 544389642 16978598 981035..982981 1 NC_022364.1 with MacA is involved in the export of macrolide; Derived by automated computational analysis using gene prediction method: Protein Homology.; macrolide ABC transporter ATP-binding protein 982981 16978598 LY180_04625 Escherichia coli LY180 macrolide ABC transporter ATP-binding protein YP_008564049.1 981035 D 1335916 CDS YP_008564050.1 544389643 16978599 complement(983054..983278) 1 NC_022364.1 inhibits DNA replication at both initiation and elongation steps; stationary phase and starvation inducible; Derived by automated computational analysis using gene prediction method: Protein Homology.; cold-shock protein 983278 16978599 LY180_04630 Escherichia coli LY180 cold-shock protein YP_008564050.1 983054 R 1335916 CDS YP_008564051.1 544389644 16978600 983601..983921 1 NC_022364.1 involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-dependent Clp protease adaptor protein ClpS 983921 clpS 16978600 clpS Escherichia coli LY180 ATP-dependent Clp protease adaptor protein ClpS YP_008564051.1 983601 D 1335916 CDS YP_008564052.1 544389645 16978601 983952..986228 1 NC_022364.1 ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease; directs protease to specific substrates; Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-dependent Clp protease ATP-binding protein 986228 clpA 16978601 clpA Escherichia coli LY180 ATP-dependent Clp protease ATP-binding protein YP_008564052.1 983952 D 1335916 CDS YP_008564053.1 544389646 16978603 complement(986913..987131) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; translation initiation factor IF-1 987131 16978603 LY180_04650 Escherichia coli LY180 translation initiation factor IF-1 YP_008564053.1 986913 R 1335916 CDS YP_008564054.1 544389647 16978604 complement(987416..988120) 1 NC_022364.1 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; Derived by automated computational analysis using gene prediction method: Protein Homology.; leucyl/phenylalanyl-tRNA--protein transferase 988120 aat 16978604 aat Escherichia coli LY180 leucyl/phenylalanyl-tRNA--protein transferase YP_008564054.1 987416 R 1335916 CDS YP_008564055.1 544389648 16978605 complement(988162..989883) 1 NC_022364.1 in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutathione ABC transporter ATP-binding protein 989883 16978605 LY180_04660 Escherichia coli LY180 glutathione ABC transporter ATP-binding protein YP_008564055.1 988162 R 1335916 CDS YP_008564056.1 544389649 16978606 complement(989884..991650) 1 NC_022364.1 in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutathione ABC transporter ATP-binding protein 991650 16978606 LY180_04665 Escherichia coli LY180 glutathione ABC transporter ATP-binding protein YP_008564056.1 989884 R 1335916 CDS YP_008564057.1 544389650 16978607 complement(991773..992738) 1 NC_022364.1 catalyzes the transfer of electrons from NADPH to thioredoxin; FAD/NAD(P) binding; Derived by automated computational analysis using gene prediction method: Protein Homology.; thioredoxin reductase 992738 16978607 LY180_04670 Escherichia coli LY180 thioredoxin reductase YP_008564057.1 991773 R 1335916 CDS YP_008564058.1 544389651 16978608 993283..993777 1 NC_022364.1 mediates a global response to leucine; acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system; Derived by automated computational analysis using gene prediction method: Protein Homology.; AsnC family transcriptional regulator 993777 16978608 LY180_04675 Escherichia coli LY180 AsnC family transcriptional regulator YP_008564058.1 993283 D 1335916 CDS YP_008564059.1 544389652 16978609 993912..997979 1 NC_022364.1 DNA-binding membrane protein required for chromosome resolution and partitioning; Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division protein FtsK 997979 16978609 LY180_04680 Escherichia coli LY180 cell division protein FtsK YP_008564059.1 993912 D 1335916 CDS YP_008564060.1 544389653 16978610 998134..998745 1 NC_022364.1 participates with LolB in the incorporation of lipoprotein into the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; lipoprotein chaperone 998745 lolA 16978610 lolA Escherichia coli LY180 lipoprotein chaperone YP_008564060.1 998134 D 1335916 CDS YP_008564061.1 544389654 16978611 998756..1000099 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; recombinase RarA 1000099 16978611 LY180_04690 Escherichia coli LY180 recombinase RarA YP_008564061.1 998756 D 1335916 CDS YP_008564062.1 544389655 16978612 1000190..1001482 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; seryl-tRNA synthetase 1001482 16978612 LY180_04695 Escherichia coli LY180 seryl-tRNA synthetase YP_008564062.1 1000190 D 1335916 CDS YP_008564063.1 544389656 16978613 1001721..1004165 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; dimethyl sulfoxide reductase subunit A 1004165 16978613 LY180_04700 Escherichia coli LY180 dimethyl sulfoxide reductase subunit A YP_008564063.1 1001721 D 1335916 CDS YP_008564064.1 544389657 16978614 1004176..1004793 1 NC_022364.1 oxidoreductase, Fe-S subunit; terminal electron transfer protein for the reduction of DMSO; Derived by automated computational analysis using gene prediction method: Protein Homology.; dimethyl sulfoxide reductase subunit B 1004793 16978614 LY180_04705 Escherichia coli LY180 dimethyl sulfoxide reductase subunit B YP_008564064.1 1004176 D 1335916 CDS YP_008564065.1 544389658 16978615 1004795..1005658 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; dimethyl sulfoxide reductase subunit C 1005658 16978615 LY180_04710 Escherichia coli LY180 dimethyl sulfoxide reductase subunit C YP_008564065.1 1004795 D 1335916 CDS YP_008564066.1 544389659 16978616 complement(1005693..1006319) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1006319 16978616 LY180_04715 Escherichia coli LY180 hypothetical protein YP_008564066.1 1005693 R 1335916 CDS YP_008564067.1 544389660 16978617 1006633..1007781 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; MFS transporter 1007781 16978617 LY180_04720 Escherichia coli LY180 MFS transporter YP_008564067.1 1006633 D 1335916 CDS YP_008564068.1 544389661 16978618 1007991..1009421 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 1009421 16978618 LY180_04725 Escherichia coli LY180 transporter YP_008564068.1 1007991 D 1335916 CDS YP_008564069.1 544389662 16978619 complement(1009422..1010330) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LysR family transcriptional regulator 1010330 16978619 LY180_04730 Escherichia coli LY180 LysR family transcriptional regulator YP_008564069.1 1009422 R 1335916 CDS YP_008564070.1 544389663 16978620 1010430..1011020 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1011020 16978620 LY180_04735 Escherichia coli LY180 hypothetical protein YP_008564070.1 1010430 D 1335916 CDS YP_008564071.1 544389664 16978621 complement(1011402..1012142) 1 NC_022364.1 activates pyruvate formate-lyase 1 under anaerobic conditions; Derived by automated computational analysis using gene prediction method: Protein Homology.; pyruvate formate lyase-activating protein 1012142 pflA 16978621 pflA Escherichia coli LY180 pyruvate formate lyase-activating protein YP_008564071.1 1011402 R 1335916 CDS YP_008564072.1 544389665 16978622 complement(1012334..1014616) 1 NC_022364.1 formate acetyltransferase; catalyzes the formation of formate and acetyl-CoA from pyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology.; keto-acid formate acetyltransferase 1014616 16978622 LY180_04745 Escherichia coli LY180 keto-acid formate acetyltransferase YP_008564072.1 1012334 R 1335916 CDS YP_008564073.1 544389666 16978623 complement(1014671..1015528) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; formate transporter 1015528 16978623 LY180_04750 Escherichia coli LY180 formate transporter YP_008564073.1 1014671 R 1335916 CDS YP_008564074.1 544389667 16978624 complement(1015933..1017693) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1017693 16978624 LY180_04755 Escherichia coli LY180 hypothetical protein YP_008564074.1 1015933 R 1335916 CDS YP_008564075.1 544389668 16978625 1017823..1018515 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1018515 16978625 LY180_04760 Escherichia coli LY180 membrane protein YP_008564075.1 1017823 D 1335916 CDS YP_008564076.1 544389669 16978626 1018714..1019802 1 NC_022364.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; catalyzes 4 phosphohydroxy L-threonine from 2-oxo 3 hydroxy 4- phosphobutanoate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-phosphoserine/phosphohydroxythreonine aminotransferase 1019802 16978626 LY180_04765 Escherichia coli LY180 3-phosphoserine/phosphohydroxythreonine aminotransferase YP_008564076.1 1018714 D 1335916 CDS YP_008564077.1 544389670 16978627 1019873..1021156 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-phosphoshikimate 1-carboxyvinyltransferase 1021156 16978627 LY180_04770 Escherichia coli LY180 3-phosphoshikimate 1-carboxyvinyltransferase YP_008564077.1 1019873 D 1335916 CDS YP_008564078.1 544389671 16978628 1021325..1022089 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; metalloprotease 1022089 16978628 LY180_04775 Escherichia coli LY180 metalloprotease YP_008564078.1 1021325 D 1335916 CDS YP_008564079.1 544389672 16978629 1022262..1022945 1 NC_022364.1 Catalyzes the formation of (d)CDP from ATP and (d)CMP; Derived by automated computational analysis using gene prediction method: Protein Homology.; cytidylate kinase 1022945 cmk 16978629 cmk Escherichia coli LY180 cytidylate kinase YP_008564079.1 1022262 D 1335916 CDS YP_008564080.1 544389673 16978630 1023056..1024729 1 NC_022364.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S1 1024729 rpsA 16978630 rpsA Escherichia coli LY180 30S ribosomal protein S1 YP_008564080.1 1023056 D 1335916 CDS YP_008564081.1 544389674 16978631 1024889..1025173 1 NC_022364.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; Derived by automated computational analysis using gene prediction method: Protein Homology.; integration host factor subunit beta 1025173 ihfB 16978631 ihfB Escherichia coli LY180 integration host factor subunit beta YP_008564081.1 1024889 D 1335916 CDS YP_008564082.1 544389675 16978632 1025381..1027645 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; competence protein ComEC 1027645 16978632 LY180_04795 Escherichia coli LY180 competence protein ComEC YP_008564082.1 1025381 D 1335916 CDS YP_008564083.1 544389676 16978633 1027682..1029430 1 NC_022364.1 involved in the transport of lipid A across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-binding protein 1029430 16978633 LY180_04800 Escherichia coli LY180 ATP-binding protein YP_008564083.1 1027682 D 1335916 CDS YP_008564084.1 544389677 16978634 1029427..1030413 1 NC_022364.1 transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; tetraacyldisaccharide 4'-kinase 1030413 lpxK 16978634 lpxK Escherichia coli LY180 tetraacyldisaccharide 4'-kinase YP_008564084.1 1029427 D 1335916 CDS YP_008564085.1 544389678 16978635 1030450..1031682 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1031682 16978635 LY180_04810 Escherichia coli LY180 hypothetical protein YP_008564085.1 1030450 D 1335916 CDS YP_008564086.1 544389679 16978636 1031734..1031916 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1031916 16978636 LY180_04815 Escherichia coli LY180 hypothetical protein YP_008564086.1 1031734 D 1335916 CDS YP_008564087.1 544389680 16978637 1031913..1032659 1 NC_022364.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-deoxy-manno-octulosonate cytidylyltransferase 1032659 16978637 LY180_04820 Escherichia coli LY180 3-deoxy-manno-octulosonate cytidylyltransferase YP_008564087.1 1031913 D 1335916 CDS YP_008564088.1 544389681 16978638 1032813..1033706 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1033706 16978638 LY180_04825 Escherichia coli LY180 hypothetical protein YP_008564088.1 1032813 D 1335916 CDS YP_008564089.1 544389682 16978639 complement(1033683..1034462) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1034462 16978639 LY180_04830 Escherichia coli LY180 membrane protein YP_008564089.1 1033683 R 1335916 CDS YP_008564090.1 544389683 16978640 1034598..1035383 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; S-adenosyl-L-methionine-dependent methyltransferase 1035383 16978640 LY180_04835 Escherichia coli LY180 S-adenosyl-L-methionine-dependent methyltransferase YP_008564090.1 1034598 D 1335916 CDS YP_008564091.1 544389684 16978641 1035380..1036702 1 NC_022364.1 acts with MukB and MukE to condense the chromosome and allow for segregation during cell division; Derived by automated computational analysis using gene prediction method: Protein Homology.; condesin subunit F 1036702 16978641 LY180_04840 Escherichia coli LY180 condesin subunit F YP_008564091.1 1035380 D 1335916 CDS YP_008564092.1 544389685 16978642 1036683..1037387 1 NC_022364.1 acts with MukB and MukF to condense the chromosome and allow for segregation during cell division; Derived by automated computational analysis using gene prediction method: Protein Homology.; condesin subunit E 1037387 16978642 LY180_04845 Escherichia coli LY180 condesin subunit E YP_008564092.1 1036683 D 1335916 CDS YP_008564093.1 544389686 16978643 1037387..1041847 1 NC_022364.1 SMC (structural maintenance of chromosomes) family of proteins; involved in chromosome condensatin and partitioning; forms a homodimer and the C-terminal is essential for DNA-binding activity while the purified N-terminal domain binds FtsZ; mutations result in cell division defects; Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division protein MukB 1041847 mukB 16978643 mukB Escherichia coli LY180 cell division protein MukB YP_008564093.1 1037387 D 1335916 CDS YP_008564094.1 544389687 16978644 1042108..1043955 1 NC_022364.1 catalyzes the formation of a meso-diaminopimelyl- meso-diaminopimelyl crosslink; Derived by automated computational analysis using gene prediction method: Protein Homology.; murein L,D-transpeptidase 1043955 16978644 LY180_04855 Escherichia coli LY180 murein L,D-transpeptidase YP_008564094.1 1042108 D 1335916 CDS YP_008564095.1 544389688 16978645 1044127..1044684 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1044684 16978645 LY180_04860 Escherichia coli LY180 hypothetical protein YP_008564095.1 1044127 D 1335916 CDS YP_008564096.1 544389689 16978646 1044711..1045358 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1045358 16978646 LY180_04865 Escherichia coli LY180 hypothetical protein YP_008564096.1 1044711 D 1335916 CDS YP_008564097.1 544389690 16978648 complement(1045580..1046770) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; aromatic amino acid aminotransferase 1046770 16978648 LY180_04875 Escherichia coli LY180 aromatic amino acid aminotransferase YP_008564097.1 1045580 R 1335916 CDS YP_008564098.1 544392886 16978649 1046769..1046939 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1046939 16978649 LY180_04880 Escherichia coli LY180 hypothetical protein YP_008564098.1 1046769 D 1335916 CDS YP_008564099.1 544389691 16978651 complement(1048650..1050050) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; asparaginyl-tRNA synthetase 1050050 16978651 LY180_04890 Escherichia coli LY180 asparaginyl-tRNA synthetase YP_008564099.1 1048650 R 1335916 CDS YP_008564100.1 544389692 16978652 complement(1050219..1051421) 1 NC_022364.1 catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; nicotinate phosphoribosyltransferase 1051421 16978652 LY180_04895 Escherichia coli LY180 nicotinate phosphoribosyltransferase YP_008564100.1 1050219 R 1335916 CDS YP_008564101.1 544389693 16978653 1051687..1054299 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; aminopeptidase N 1054299 pepN 16978653 pepN Escherichia coli LY180 aminopeptidase N YP_008564101.1 1051687 D 1335916 CDS YP_008564102.1 544389694 16978654 complement(1054506..1055273) 1 NC_022364.1 functions together with PotBCD (A2BCD) in ATP-dependent polyamine transport; PotA is the membrane-associated ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.; putrescine/spermidine ABC transporter ATPase 1055273 potA 16978654 potA Escherichia coli LY180 putrescine/spermidine ABC transporter ATPase YP_008564102.1 1054506 R 1335916 CDS YP_008564103.1 544389695 16978655 complement(1055270..1056061) 1 NC_022364.1 part of the ABC type transport system for alkanesulfonate SsuABC; SsuB the ATP-binding subunit and SsuC the permease; Derived by automated computational analysis using gene prediction method: Protein Homology.; sulfonate ABC transporter 1056061 ssuC 16978655 ssuC Escherichia coli LY180 sulfonate ABC transporter YP_008564103.1 1055270 R 1335916 CDS YP_008564104.1 544389696 16978656 complement(1056072..1057217) 1 NC_022364.1 catalyzes the release of sulfite from alkanesulfonates; Derived by automated computational analysis using gene prediction method: Protein Homology.; alkanesulfonate monooxygenase 1057217 16978656 LY180_04915 Escherichia coli LY180 alkanesulfonate monooxygenase YP_008564104.1 1056072 R 1335916 CDS YP_008564105.1 544389697 16978657 complement(1057214..1058173) 1 NC_022364.1 part of the ABC type transport system SsuABC for aliphatic sulfonates; with SsuA being the periplasmic subunit SsuB the ATP-binding subunit and SsuC the permease; Derived by automated computational analysis using gene prediction method: Protein Homology.; sulfonate ABC transporter substrate-binding protein 1058173 16978657 LY180_04920 Escherichia coli LY180 sulfonate ABC transporter substrate-binding protein YP_008564105.1 1057214 R 1335916 CDS YP_008564106.1 544389698 16978658 complement(1058166..1058741) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; NAD(P)H-dependent FMN reductase 1058741 16978658 LY180_04925 Escherichia coli LY180 NAD(P)H-dependent FMN reductase YP_008564106.1 1058166 R 1335916 CDS YP_008564107.1 544389699 16978659 1059097..1059639 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein 1059639 16978659 LY180_04930 Escherichia coli LY180 fimbrial protein YP_008564107.1 1059097 D 1335916 CDS YP_008564108.1 544389700 16978660 1059722..1060423 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein 1060423 16978660 LY180_04935 Escherichia coli LY180 fimbrial protein YP_008564108.1 1059722 D 1335916 CDS YP_008564109.1 544389701 16978661 1060493..1063048 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein FimD 1063048 16978661 LY180_04940 Escherichia coli LY180 fimbrial protein FimD YP_008564109.1 1060493 D 1335916 CDS YP_008564110.1 544389702 16978662 1063039..1064109 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein 1064109 16978662 LY180_04945 Escherichia coli LY180 fimbrial protein YP_008564110.1 1063039 D 1335916 CDS YP_008564111.1 544389703 16978663 1064121..1064663 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein 1064663 16978663 LY180_04950 Escherichia coli LY180 fimbrial protein YP_008564111.1 1064121 D 1335916 CDS YP_008564112.1 544389704 16978664 1064671..1065186 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein 1065186 16978664 LY180_04955 Escherichia coli LY180 fimbrial protein YP_008564112.1 1064671 D 1335916 CDS YP_008564113.1 544392887 16978665 1065200..1065889 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; fimbrial chaperone BcfG 1065889 16978665 LY180_04960 Escherichia coli LY180 fimbrial chaperone BcfG YP_008564113.1 1065200 D 1335916 CDS YP_008564114.1 544389705 16978666 1066000..1067010 1 NC_022364.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; Derived by automated computational analysis using gene prediction method: Protein Homology.; dihydroorotate dehydrogenase 1067010 16978666 LY180_04965 Escherichia coli LY180 dihydroorotate dehydrogenase YP_008564114.1 1066000 D 1335916 CDS YP_008564115.1 544389706 16978667 1067184..1067726 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division protein ZapC 1067726 16978667 LY180_04970 Escherichia coli LY180 cell division protein ZapC YP_008564115.1 1067184 D 1335916 CDS YP_008564116.1 544389707 16978668 complement(1067723..1068832) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1068832 16978668 LY180_04975 Escherichia coli LY180 hypothetical protein YP_008564116.1 1067723 R 1335916 CDS YP_008564117.1 544389708 16978669 1069076..1071184 1 NC_022364.1 catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; 23S rRNA methyltransferase 1071184 rlmL 16978669 rlmL Escherichia coli LY180 23S rRNA methyltransferase YP_008564117.1 1069076 D 1335916 CDS YP_008564118.1 544389709 16978670 1071195..1073102 1 NC_022364.1 Uup; in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity; mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth; Derived by automated computational analysis using gene prediction method: Protein Homology.; heme ABC transporter ATPase 1073102 16978670 LY180_04985 Escherichia coli LY180 heme ABC transporter ATPase YP_008564118.1 1071195 D 1335916 CDS YP_008564119.1 544389710 16978671 1073232..1074485 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; paraquat-inducible protein A 1074485 16978671 LY180_04990 Escherichia coli LY180 paraquat-inducible protein A YP_008564119.1 1073232 D 1335916 CDS YP_008564120.1 544389711 16978672 1074490..1076130 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; paraquat-inducible protein B 1076130 16978672 LY180_04995 Escherichia coli LY180 paraquat-inducible protein B YP_008564120.1 1074490 D 1335916 CDS YP_008564121.1 544389712 16978673 1076127..1076690 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1076690 16978673 LY180_05000 Escherichia coli LY180 hypothetical protein YP_008564121.1 1076127 D 1335916 CDS YP_008564122.1 544389713 16978674 1076946..1077113 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ribosome modulation factor 1077113 16978674 LY180_05005 Escherichia coli LY180 ribosome modulation factor YP_008564122.1 1076946 D 1335916 CDS YP_008564123.1 544389714 16978675 complement(1077183..1077809) 1 NC_022364.1 catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-hydroxydecanoyl-ACP dehydratase 1077809 16978675 LY180_05010 Escherichia coli LY180 3-hydroxydecanoyl-ACP dehydratase YP_008564123.1 1077183 R 1335916 CDS YP_008564124.1 544389715 16978676 complement(1077770..1079530) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Lon protease 1079530 16978676 LY180_05015 Escherichia coli LY180 Lon protease YP_008564124.1 1077770 R 1335916 CDS YP_008564125.1 544389716 16978677 1079716..1080168 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Ter macrodomain organizer matS-binding protein 1080168 16978677 LY180_05020 Escherichia coli LY180 Ter macrodomain organizer matS-binding protein YP_008564125.1 1079716 D 1335916 CDS YP_008564126.1 544389717 16978678 complement(1080244..1081284) 1 NC_022364.1 OmpA is believed to be a porin, involved in diffusion of nonspecific small solutes across the outer membrane. It is the most abundant integral protein of the outer membrane of E. coli, and it is known to play a role as a phage receptor, a mediator of F-factor dependent conjugation, and in maintaining the structural shape of the outer membrane; 3a; II*; G; d; Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1081284 16978678 LY180_05025 Escherichia coli LY180 membrane protein YP_008564126.1 1080244 R 1335916 CDS YP_008564127.1 544389718 16978679 complement(1081641..1082150) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; SOS cell division inhibitor 1082150 16978679 LY180_05030 Escherichia coli LY180 SOS cell division inhibitor YP_008564127.1 1081641 R 1335916 CDS YP_008564128.1 544389719 16978680 1082369..1082998 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Crp/Fnr family transcriptional regulator 1082998 16978680 LY180_05035 Escherichia coli LY180 Crp/Fnr family transcriptional regulator YP_008564128.1 1082369 D 1335916 CDS YP_008564129.1 544389720 16978681 complement(1082961..1085123) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1085123 16978681 LY180_05040 Escherichia coli LY180 membrane protein YP_008564129.1 1082961 R 1335916 CDS YP_008564130.1 544389721 16978682 complement(1085133..1085579) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1085579 16978682 LY180_05045 Escherichia coli LY180 membrane protein YP_008564130.1 1085133 R 1335916 CDS YP_008564131.1 544389722 16978683 1085702..1087756 1 NC_022364.1 catalyzes the ATP-dependent unwinding of duplex DNA in the 3' to 5' direction with respect to the bound single strand; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA helicase IV 1087756 helD 16978683 helD Escherichia coli LY180 DNA helicase IV YP_008564131.1 1085702 D 1335916 CDS YP_008564132.1 544389723 16978685 complement(1088378..1089040) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1089040 16978685 LY180_05060 Escherichia coli LY180 hypothetical protein YP_008564132.1 1088378 R 1335916 CDS YP_008564133.1 544389724 16978686 1089213..1089626 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1089626 16978686 LY180_05065 Escherichia coli LY180 hypothetical protein YP_008564133.1 1089213 D 1335916 CDS YP_008564134.1 544389725 16978687 complement(1089671..1089988) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; heat shock protein HspQ 1089988 16978687 LY180_05070 Escherichia coli LY180 heat shock protein HspQ YP_008564134.1 1089671 R 1335916 CDS YP_008564135.1 544389726 16978688 complement(1090046..1091236) 1 NC_022364.1 SAM-dependent;catalyzes the methylation of cytosine at position 1962 of the 23S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; 23S rRNA methyltransferase 1091236 16978688 LY180_05075 Escherichia coli LY180 23S rRNA methyltransferase YP_008564135.1 1090046 R 1335916 CDS YP_008564136.1 544389727 16978689 1091331..1091609 1 NC_022364.1 catalyzes the hydrolysis of acylphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; acylphosphatase 1091609 16978689 LY180_05080 Escherichia coli LY180 acylphosphatase YP_008564136.1 1091331 D 1335916 CDS YP_008564137.1 544389728 16978690 complement(1091606..1091935) 1 NC_022364.1 transfers sulfur from TusBCD complex to MnmA; involved in thiouridation of U34 position of some tRNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.; sulfur transfer protein TusE 1091935 16978690 LY180_05085 Escherichia coli LY180 sulfur transfer protein TusE YP_008564137.1 1091606 R 1335916 CDS YP_008564138.1 544389729 16978691 complement(1092026..1092685) 1 NC_022364.1 binds to the HflBKC complex which modulates FtsH activity; Derived by automated computational analysis using gene prediction method: Protein Homology.; HflBKC-binding inner membrane protein 1092685 16978691 LY180_05090 Escherichia coli LY180 HflBKC-binding inner membrane protein YP_008564138.1 1092026 R 1335916 CDS YP_008564139.1 544389730 16978693 1093406..1094524 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrogenase 1094524 16978693 LY180_05100 Escherichia coli LY180 hydrogenase YP_008564139.1 1093406 D 1335916 CDS YP_008564140.1 544389731 16978694 1094521..1096314 1 NC_022364.1 involved in hydrogen uptake; Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrogenase 2 large subunit 1096314 16978694 LY180_05105 Escherichia coli LY180 hydrogenase 2 large subunit YP_008564140.1 1094521 D 1335916 CDS YP_008564141.1 544389732 16978695 1096333..1097040 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrogenase 1 b-type cytochrome subunit 1097040 16978695 LY180_05110 Escherichia coli LY180 hydrogenase 1 b-type cytochrome subunit YP_008564141.1 1096333 D 1335916 CDS YP_008564142.1 544389733 16978696 1097037..1097624 1 NC_022364.1 HyaD; endopeptidase involved in the cleavage of the C-terminus end of HyaB (the large subunit of hydrogenase 1); Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrogenase 1 maturation protease 1097624 16978696 LY180_05115 Escherichia coli LY180 hydrogenase 1 maturation protease YP_008564142.1 1097037 D 1335916 CDS YP_008564143.1 544389734 16978697 1097621..1098019 1 NC_022364.1 involved in processing hydrogenase proteins HyaA and HyaB; Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrogenase-1 operon protein HyaE 1098019 16978697 LY180_05120 Escherichia coli LY180 hydrogenase-1 operon protein HyaE YP_008564143.1 1097621 D 1335916 CDS YP_008564144.1 544389735 16978698 1098016..1098873 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrogenase-1 operon protein HyaF 1098873 16978698 LY180_05125 Escherichia coli LY180 hydrogenase-1 operon protein HyaF YP_008564144.1 1098016 D 1335916 CDS YP_008564145.1 544389736 16978699 1099007..1100551 1 NC_022364.1 part of the aerobic respiratory chain; catalyzes the ubiquinol to ubiquinone; Derived by automated computational analysis using gene prediction method: Protein Homology.; cytochrome BD oxidase subunit I 1100551 16978699 LY180_05130 Escherichia coli LY180 cytochrome BD oxidase subunit I YP_008564145.1 1099007 D 1335916 CDS YP_008564146.1 544389737 16978700 1100563..1101699 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cytochrome BD oxidase subunit II 1101699 16978700 LY180_05135 Escherichia coli LY180 cytochrome BD oxidase subunit II YP_008564146.1 1100563 D 1335916 CDS YP_008564147.1 544389738 16978701 1101854..1103182 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoanhydride phosphorylase 1103182 16978701 LY180_05140 Escherichia coli LY180 phosphoanhydride phosphorylase YP_008564147.1 1101854 D 1335916 CDS YP_008564148.1 544389739 16978702 complement(1103297..1105477) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; protein tyrosine kinase 1105477 16978702 LY180_05145 Escherichia coli LY180 protein tyrosine kinase YP_008564148.1 1103297 R 1335916 CDS YP_008564149.1 544389740 16978703 complement(1105497..1105943) 1 NC_022364.1 Wzb shows phosphatase activity towards the autophosphorylated Wzc protein, which induces colanic acid biosynthesis; catalyzes the phosphorylation of UDP-glucose dehydrogenase, an enzyme involved in colanic acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; protein-tyrosine phosphatase 1105943 16978703 LY180_05150 Escherichia coli LY180 protein-tyrosine phosphatase YP_008564149.1 1105497 R 1335916 CDS YP_008564150.1 544389741 16978704 complement(1105931..1107070) 1 NC_022364.1 required for the translocation of capsular polysaccharide through the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; polysaccharide export protein Wza 1107070 16978704 LY180_05155 Escherichia coli LY180 polysaccharide export protein Wza YP_008564150.1 1105931 R 1335916 CDS YP_008564151.1 544389742 16978705 complement(1107116..1109212) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1109212 16978705 LY180_05160 Escherichia coli LY180 membrane protein YP_008564151.1 1107116 R 1335916 CDS YP_008564152.1 544389743 16978706 complement(1109212..1109958) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1109958 16978706 LY180_05165 Escherichia coli LY180 hypothetical protein YP_008564152.1 1109212 R 1335916 CDS YP_008564153.1 544389744 16978707 complement(1109955..1110533) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1110533 16978707 LY180_05170 Escherichia coli LY180 hypothetical protein YP_008564153.1 1109955 R 1335916 CDS YP_008564154.1 544389745 16978708 complement(1110706..1111011) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1111011 16978708 LY180_05175 Escherichia coli LY180 membrane protein YP_008564154.1 1110706 R 1335916 CDS YP_008564155.1 544389746 16978709 complement(1111454..1111666) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cold-shock protein 1111666 16978709 LY180_05180 Escherichia coli LY180 cold-shock protein YP_008564155.1 1111454 R 1335916 CDS YP_008564156.1 544389747 16978710 1111952..1112164 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cold-shock protein 1112164 16978710 LY180_05185 Escherichia coli LY180 cold-shock protein YP_008564156.1 1111952 D 1335916 CDS YP_008564157.1 544389748 16978711 1112338..1112568 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cold-shock protein 1112568 16978711 LY180_05190 Escherichia coli LY180 cold-shock protein YP_008564157.1 1112338 D 1335916 CDS YP_008564158.1 544389749 16978712 1112558..1112731 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; gns 1112731 16978712 LY180_05195 Escherichia coli LY180 gns YP_008564158.1 1112558 D 1335916 CDS YP_008564159.1 544389750 16978713 complement(1112779..1113852) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; electron transporter YccM 1113852 16978713 LY180_05200 Escherichia coli LY180 electron transporter YccM YP_008564159.1 1112779 R 1335916 CDS YP_008564160.1 544389751 16978714 complement(1113924..1116668) 1 NC_022364.1 Member of the two-component regulatory system torS/torR involved in the anaerobic utilization of trimethylamine-N-oxide; Derived by automated computational analysis using gene prediction method: Protein Homology.; sensory histidine kinase 1116668 16978714 LY180_05205 Escherichia coli LY180 sensory histidine kinase YP_008564160.1 1113924 R 1335916 CDS YP_008564161.1 544389752 16978715 1116751..1117779 1 NC_022364.1 periplasmic sensory protein associated with the TorRS two-component regulatory system; Derived by automated computational analysis using gene prediction method: Protein Homology.; TMAO reductase 1117779 16978715 LY180_05210 Escherichia coli LY180 TMAO reductase YP_008564161.1 1116751 D 1335916 CDS YP_008564162.1 544389753 16978716 complement(1117752..1118444) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; chemotaxis protein CheY 1118444 16978716 LY180_05215 Escherichia coli LY180 chemotaxis protein CheY YP_008564162.1 1117752 R 1335916 CDS YP_008564163.1 544389754 16978717 1118574..1119746 1 NC_022364.1 with TorA forms the inducible trimethylamine N-oxide reductase which transfers electrons from menaquinones first to TorC then to TorA; Derived by automated computational analysis using gene prediction method: Protein Homology.; trimethylamine N-oxide reductase cytochrome C subunit 1119746 16978717 LY180_05220 Escherichia coli LY180 trimethylamine N-oxide reductase cytochrome C subunit YP_008564163.1 1118574 D 1335916 CDS YP_008564164.1 544389755 16978718 1119746..1122292 1 NC_022364.1 catalyzes the reduction of trimethylamine-N-oxide to form trimethylamine; Derived by automated computational analysis using gene prediction method: Protein Homology.; trimethylamine N-oxide reductase I catalytic subunit 1122292 16978718 LY180_05225 Escherichia coli LY180 trimethylamine N-oxide reductase I catalytic subunit YP_008564164.1 1119746 D 1335916 CDS YP_008564165.1 544389756 16978719 1122289..1122888 1 NC_022364.1 TorD; involved in the biogenesis of torA; acts on torA before the insertion of the molybdenum cofactor and, as a result, probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor; Derived by automated computational analysis using gene prediction method: Protein Homology.; chaperone protein TorD 1122888 torD 16978719 torD Escherichia coli LY180 chaperone protein TorD YP_008564165.1 1122289 D 1335916 CDS YP_008564166.1 544389757 16978720 complement(1122981..1123286) 1 NC_022364.1 with CpbA modulates the activity of the dnaK chaperone system; interacts with CbpA and inhibits both the DnaJ-like co-chaperone activity and the DNA binding activity of CbpA; Derived by automated computational analysis using gene prediction method: Protein Homology.; chaperone-modulator protein CbpM 1123286 16978720 LY180_05235 Escherichia coli LY180 chaperone-modulator protein CbpM YP_008564166.1 1122981 R 1335916 CDS YP_008564167.1 544389758 16978721 complement(1123286..1124206) 1 NC_022364.1 functional analog of DnaJ; co-chaperone with DnaK, molecular chaperone in an adaptive response to environmental stresses other than heat shock; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA-binding protein 1124206 16978721 LY180_05240 Escherichia coli LY180 DNA-binding protein YP_008564167.1 1123286 R 1335916 CDS YP_008564168.1 544389759 16978723 1126016..1127257 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glucose-1-phosphatase/inositol phosphatase 1127257 16978723 LY180_05250 Escherichia coli LY180 glucose-1-phosphatase/inositol phosphatase YP_008564168.1 1126016 D 1335916 CDS YP_008564169.1 544389760 16978724 complement(1127295..1127522) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1127522 16978724 LY180_05255 Escherichia coli LY180 hypothetical protein YP_008564169.1 1127295 R 1335916 CDS YP_008564170.1 544389761 16978725 complement(1127543..1128139) 1 NC_022364.1 catalyzes the transfer of electrons from NADH to ubiquinone; Derived by automated computational analysis using gene prediction method: Protein Homology.; NAD(P)H:quinone oxidoreductase 1128139 16978725 LY180_05260 Escherichia coli LY180 NAD(P)H:quinone oxidoreductase YP_008564170.1 1127543 R 1335916 CDS YP_008564171.1 544389762 16978726 1128512..1128685 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1128685 16978726 LY180_05265 Escherichia coli LY180 hypothetical protein YP_008564171.1 1128512 D 1335916 CDS YP_008564172.1 544389763 16978727 complement(1128768..1130096) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; pyrimidine permease 1130096 16978727 LY180_05270 Escherichia coli LY180 pyrimidine permease YP_008564172.1 1128768 R 1335916 CDS YP_008564173.1 544389764 16978728 complement(1130117..1130611) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; FMN reductase 1130611 16978728 LY180_05275 Escherichia coli LY180 FMN reductase YP_008564173.1 1130117 R 1335916 CDS YP_008564174.1 544389765 16978729 complement(1130622..1131212) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; malonic semialdehyde reductase 1131212 16978729 LY180_05280 Escherichia coli LY180 malonic semialdehyde reductase YP_008564174.1 1130622 R 1335916 CDS YP_008564175.1 544389766 16978730 complement(1131222..1132022) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; aminoacrylate hydrolase 1132022 16978730 LY180_05285 Escherichia coli LY180 aminoacrylate hydrolase YP_008564175.1 1131222 R 1335916 CDS YP_008564176.1 544389767 16978731 complement(1132030..1132416) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; aminoacrylate peracid reductase 1132416 16978731 LY180_05290 Escherichia coli LY180 aminoacrylate peracid reductase YP_008564176.1 1132030 R 1335916 CDS YP_008564177.1 544389768 16978732 complement(1132428..1133123) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; amidohydrolase 1133123 16978732 LY180_05295 Escherichia coli LY180 amidohydrolase YP_008564177.1 1132428 R 1335916 CDS YP_008564178.1 544389769 16978733 complement(1133120..1134214) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; pyrimidine monooxygenase 1134214 16978733 LY180_05300 Escherichia coli LY180 pyrimidine monooxygenase YP_008564178.1 1133120 R 1335916 CDS YP_008564179.1 544389770 16978734 1134499..1135137 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 1135137 16978734 LY180_05305 Escherichia coli LY180 transcriptional regulator YP_008564179.1 1134499 D 1335916 CDS YP_008564180.1 544389771 16978735 complement(1135177..1139139) 1 NC_022364.1 proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus; forms dimers and is a peripherally membrane-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 1139139 putA 16978735 putA Escherichia coli LY180 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase YP_008564180.1 1135177 R 1335916 CDS YP_008564181.1 544392888 16978736 1139194..1139403 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1139403 16978736 LY180_05315 Escherichia coli LY180 hypothetical protein YP_008564181.1 1139194 D 1335916 CDS YP_008564182.1 544389772 16978737 1139562..1141070 1 NC_022364.1 involved in the sodium dependent uptake of proline; Derived by automated computational analysis using gene prediction method: Protein Homology.; proline:sodium symporter 1141070 16978737 LY180_05320 Escherichia coli LY180 proline:sodium symporter YP_008564182.1 1139562 D 1335916 CDS YP_008564183.1 544389773 16978738 1141736..1142566 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; iron permease 1142566 16978738 LY180_05325 Escherichia coli LY180 iron permease YP_008564183.1 1141736 D 1335916 CDS YP_008564184.1 544389774 16978739 1142624..1143751 1 NC_022364.1 with EfeUB forms an iron transport system which is silent in E. coli K-12 due to a mutation in EfeU; Derived by automated computational analysis using gene prediction method: Protein Homology.; iron ABC transporter substrate-binding protein 1143751 16978739 LY180_05330 Escherichia coli LY180 iron ABC transporter substrate-binding protein YP_008564184.1 1142624 D 1335916 CDS YP_008564185.1 544389775 16978740 1143757..1145028 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peroxidase 1145028 16978740 LY180_05335 Escherichia coli LY180 peroxidase YP_008564185.1 1143757 D 1335916 CDS YP_008564186.1 544389776 16978741 1145291..1146355 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphate starvation protein PhoH 1146355 16978741 LY180_05340 Escherichia coli LY180 phosphate starvation protein PhoH YP_008564186.1 1145291 D 1335916 CDS YP_008564187.1 544389777 16978742 complement(1146405..1146818) 1 NC_022364.1 in Yersinia this gene is involved in biofilm formation and hemin adsorption; in Escherichia coli it is involved in PGA biosynthesis and export; Derived by automated computational analysis using gene prediction method: Protein Homology.; permease 1146818 pgaD 16978742 pgaD Escherichia coli LY180 permease YP_008564187.1 1146405 R 1335916 CDS YP_008564188.1 544389778 16978743 complement(1146820..1148145) 1 NC_022364.1 predicted polysaccharide polymerase involved in biofilm formation; required for the synthesis of the beta-1,6-N-acetylglucosamine polysaccharide; PgaC; in Yersinia the HmsR protein is an inner membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; N-glycosyltransferase 1148145 16978743 LY180_05350 Escherichia coli LY180 N-glycosyltransferase YP_008564188.1 1146820 R 1335916 CDS YP_008564189.1 544389779 16978744 complement(1148138..1150156) 1 NC_022364.1 in Yersinia this protein is involved in biofilm formation and hemin adsorption; related protein PgaB in Escherichia coli is an outer membrane N-deacetylase involved in poly-beta-1,6-N-acetyl-D-glucosamine (PGA) export; Derived by automated computational analysis using gene prediction method: Protein Homology.; outer membrane N-deacetylase 1150156 pgaB 16978744 pgaB Escherichia coli LY180 outer membrane N-deacetylase YP_008564189.1 1148138 R 1335916 CDS YP_008564190.1 544389780 16978745 complement(1150165..1152588) 1 NC_022364.1 outer membrane protein essential for the synthesis of poly-beta-1,6-N-acetyl-D-glucosamine (PGA); adhesin required for biofilm formation; PgaA (HmsH) seems to translocate and/or dock PGA to the cell surface; member of the hmsHFRS (ycdSRQP or pgaABCD in Escherichia coli) operon in Yersinia; Derived by automated computational analysis using gene prediction method: Protein Homology.; poly-beta-1,6-N-acetyl-D-glucosamine export protein 1152588 pgaA 16978745 pgaA Escherichia coli LY180 poly-beta-1,6-N-acetyl-D-glucosamine export protein YP_008564190.1 1150165 R 1335916 CDS YP_008564191.1 544392889 16978746 complement(1153423..1154631) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1154631 16978746 LY180_05365 Escherichia coli LY180 hypothetical protein YP_008564191.1 1153423 R 1335916 CDS YP_008564192.1 544389781 16978747 1154704..1155339 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrolase 1155339 16978747 LY180_05370 Escherichia coli LY180 hydrolase YP_008564192.1 1154704 D 1335916 CDS YP_008564193.1 544389782 16978748 1155363..1155917 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; molecular chaperone 1155917 16978748 LY180_05375 Escherichia coli LY180 molecular chaperone YP_008564193.1 1155363 D 1335916 CDS YP_008564194.1 544389783 16978749 1155989..1156510 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1156510 16978749 LY180_05380 Escherichia coli LY180 membrane protein YP_008564194.1 1155989 D 1335916 CDS YP_008564195.1 544389784 16978750 complement(1156574..1157407) 1 NC_022364.1 involved in the stability of the curlin proteins during assembly; involved in the secretion of the major curlin subunit CsgA across the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 1157407 16978750 LY180_05385 Escherichia coli LY180 transporter YP_008564195.1 1156574 R 1335916 CDS YP_008564196.1 544389785 16978751 complement(1157434..1157850) 1 NC_022364.1 nucleator protein that participates in the polymerization of curlin (CsgA) subunits into curli (extracellular fibers from Escherichia and Salmonella spp. that are involved in the colonization of inert surfaces and biofilm formation); part of the curli secretion and assembly protein complex; Derived by automated computational analysis using gene prediction method: Protein Homology.; curli assembly protein CsgF 1157850 16978751 LY180_05390 Escherichia coli LY180 curli assembly protein CsgF YP_008564196.1 1157434 R 1335916 CDS YP_008564197.1 544389786 16978752 complement(1157875..1158264) 1 NC_022364.1 chaperone-like protein that participates in the polymerization of curlin (CsgA) subunits into curli (extracellular fibers from Escherichia and Salmonella spp. that are involved in the colonization of inert surfaces and biofilm formation); part of the curli secretion and assembly protein complex; Derived by automated computational analysis using gene prediction method: Protein Homology.; curli assembly protein CsgE 1158264 16978752 LY180_05395 Escherichia coli LY180 curli assembly protein CsgE YP_008564197.1 1157875 R 1335916 CDS YP_008564198.1 544389787 16978753 complement(1158269..1158919) 1 NC_022364.1 activates the csgBA and csgDEFG operons involved in biofilm formation; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 1158919 16978753 LY180_05400 Escherichia coli LY180 transcriptional regulator YP_008564198.1 1158269 R 1335916 CDS YP_008564199.1 544389788 16978754 1159673..1160128 1 NC_022364.1 CsgB; functions as a nucleator in the assembly of curli (coiled surface structures) on the cell surface; Derived by automated computational analysis using gene prediction method: Protein Homology.; curlin 1160128 csgB 16978754 csgB Escherichia coli LY180 curlin YP_008564199.1 1159673 D 1335916 CDS YP_008564200.1 544389789 16978755 1160169..1160624 1 NC_022364.1 the major structural subunit of curlin which assemble to form curli which can bind to fibronectin; Derived by automated computational analysis using gene prediction method: Protein Homology.; major curlin subunit 1160624 csgA 16978755 csgA Escherichia coli LY180 major curlin subunit YP_008564200.1 1160169 D 1335916 CDS YP_008564201.1 544389790 16978756 1160683..1161015 1 NC_022364.1 involved in autoagglutination of curliated cells; not involved in production of curli fibers; Derived by automated computational analysis using gene prediction method: Protein Homology.; curli assembly protein CsgC 1161015 csgC 16978756 csgC Escherichia coli LY180 curli assembly protein CsgC YP_008564201.1 1160683 D 1335916 CDS YP_008564202.1 544389791 16978757 1161136..1161447 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1161447 16978757 LY180_05420 Escherichia coli LY180 hypothetical protein YP_008564202.1 1161136 D 1335916 CDS YP_008564203.1 544389792 16978758 1161542..1162075 1 NC_022364.1 interacts and inactivates RNase III during cold shock; Derived by automated computational analysis using gene prediction method: Protein Homology.; RNase III inhibitor 1162075 16978758 LY180_05425 Escherichia coli LY180 RNase III inhibitor YP_008564203.1 1161542 D 1335916 CDS YP_008564204.1 544389793 16978759 1162068..1163498 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1163498 16978759 LY180_05430 Escherichia coli LY180 hypothetical protein YP_008564204.1 1162068 D 1335916 CDS YP_008564205.1 544389794 16978760 complement(1163506..1164663) 1 NC_022364.1 required for the transfer of succinyl residues to osmoregulated periplasmic glucans; Derived by automated computational analysis using gene prediction method: Protein Homology.; glucan biosynthesis protein 1164663 opgC 16978760 opgC Escherichia coli LY180 glucan biosynthesis protein YP_008564205.1 1163506 R 1335916 CDS YP_008564206.1 544389795 16978761 1165039..1166592 1 NC_022364.1 involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan; Derived by automated computational analysis using gene prediction method: Protein Homology.; glucan biosynthesis protein D 1166592 mdoG 16978761 mdoG Escherichia coli LY180 glucan biosynthesis protein D YP_008564206.1 1165039 D 1335916 CDS YP_008564207.1 544389796 16978762 1166585..1169128 1 NC_022364.1 necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space; Derived by automated computational analysis using gene prediction method: Protein Homology.; glucosyltransferase 1169128 16978762 LY180_05445 Escherichia coli LY180 glucosyltransferase YP_008564207.1 1166585 D 1335916 CDS YP_008564208.1 544389797 16978764 1169301..1169528 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; lipoprotein 1169528 16978764 LY180_05455 Escherichia coli LY180 lipoprotein YP_008564208.1 1169301 D 1335916 CDS YP_008564209.1 544389798 16978765 complement(1169529..1169903) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; SecY/SecA suppressor protein 1169903 16978765 LY180_05460 Escherichia coli LY180 SecY/SecA suppressor protein YP_008564209.1 1169529 R 1335916 CDS YP_008564210.1 544389799 16978766 complement(1169986..1171212) 1 NC_022364.1 Confers resistance to fosfomycin and deoxycholate; Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug transporter 1171212 16978766 LY180_05465 Escherichia coli LY180 multidrug transporter YP_008564210.1 1169986 R 1335916 CDS YP_008564211.1 544389800 16978767 complement(1171384..1172304) 1 NC_022364.1 Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; Derived by automated computational analysis using gene prediction method: Protein Homology.; lipid A biosynthesis lauroyl acyltransferase 1172304 16978767 LY180_05470 Escherichia coli LY180 lipid A biosynthesis lauroyl acyltransferase YP_008564211.1 1171384 R 1335916 CDS YP_008564212.1 544389801 16978768 1172529..1173581 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sulfurtransferase 1173581 16978768 LY180_05475 Escherichia coli LY180 sulfurtransferase YP_008564212.1 1172529 D 1335916 CDS YP_008564213.1 544389802 16978769 complement(1173623..1174198) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1174198 16978769 LY180_05480 Escherichia coli LY180 hypothetical protein YP_008564213.1 1173623 R 1335916 CDS YP_008564214.1 544389803 16978770 complement(1174202..1174768) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cytochrome B561 1174768 16978770 LY180_05485 Escherichia coli LY180 cytochrome B561 YP_008564214.1 1174202 R 1335916 CDS YP_008564215.1 544392890 16978771 1174758..1174904 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1174904 16978771 LY180_05490 Escherichia coli LY180 hypothetical protein YP_008564215.1 1174758 D 1335916 CDS YP_008564216.1 544389804 16978772 complement(1175029..1175169) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1175169 16978772 LY180_05495 Escherichia coli LY180 hypothetical protein YP_008564216.1 1175029 R 1335916 CDS YP_008564217.1 544389805 16978773 complement(1175190..1176308) 1 NC_022364.1 catalyzes the demethylation of N-methyl-L-tryptophan forming L-tryptophan and formaldehyde; FAD-binding; can also catalyze the demethylation of other N-methyl amino acids; Derived by automated computational analysis using gene prediction method: Protein Homology.; N-methyltryptophan oxidase 1176308 solA 16978773 solA Escherichia coli LY180 N-methyltryptophan oxidase YP_008564217.1 1175190 R 1335916 CDS YP_008564218.1 544389806 16978774 complement(1176423..1176677) 1 NC_022364.1 BssS; regulator of biofilm through signal secretion; disruption of this gene in Escherichia coli led to effects on biofilm formation, alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing; Derived by automated computational analysis using gene prediction method: Protein Homology.; biofilm formation regulatory protein BssS 1176677 bssS 16978774 bssS Escherichia coli LY180 biofilm formation regulatory protein BssS YP_008564218.1 1176423 R 1335916 CDS YP_008564219.1 544389807 16978775 complement(1176967..1177212) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA damage-inducible protein I 1177212 16978775 LY180_05510 Escherichia coli LY180 DNA damage-inducible protein I YP_008564219.1 1176967 R 1335916 CDS YP_008564220.1 544389808 16978776 complement(1177286..1178332) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; dihydroorotase 1178332 16978776 LY180_05515 Escherichia coli LY180 dihydroorotase YP_008564220.1 1177286 R 1335916 CDS YP_008564221.1 544389809 16978777 complement(1178438..1178998) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; lipoprotein 1178998 16978777 LY180_05520 Escherichia coli LY180 lipoprotein YP_008564221.1 1178438 R 1335916 CDS YP_008564222.1 544389810 16978778 complement(1179132..1179779) 1 NC_022364.1 cofactor involved in the reduction of disulfides; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutaredoxin 1179779 16978778 LY180_05525 Escherichia coli LY180 glutaredoxin YP_008564222.1 1179132 R 1335916 CDS YP_008564223.1 544389811 16978779 complement(1179843..1181051) 1 NC_022364.1 Confers resistance to norfloxacin and enoxacin; Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug resistance protein MdtH 1181051 16978779 LY180_05530 Escherichia coli LY180 multidrug resistance protein MdtH YP_008564223.1 1179843 R 1335916 CDS YP_008564224.1 544389812 16978780 1181287..1181871 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; alanine acetyltransferase 1181871 16978780 LY180_05535 Escherichia coli LY180 alanine acetyltransferase YP_008564224.1 1181287 D 1335916 CDS YP_008564225.1 544389813 16978781 1181882..1182529 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1182529 16978781 LY180_05540 Escherichia coli LY180 hypothetical protein YP_008564225.1 1181882 D 1335916 CDS YP_008564226.1 544389814 16978782 1182531..1183454 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; virulence factor MviM 1183454 16978782 LY180_05545 Escherichia coli LY180 virulence factor MviM YP_008564226.1 1182531 D 1335916 CDS YP_008564227.1 544389815 16978783 1183564..1185099 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1185099 16978783 LY180_05550 Escherichia coli LY180 membrane protein YP_008564227.1 1183564 D 1335916 CDS YP_008564228.1 544389816 16978784 complement(1185139..1185555) 1 NC_022364.1 export chaperone for FlgK and FlgL; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagella synthesis chaperone protein FlgN 1185555 16978784 LY180_05555 Escherichia coli LY180 flagella synthesis chaperone protein FlgN YP_008564228.1 1185139 R 1335916 CDS YP_008564229.1 544389817 16978785 complement(1185560..1185853) 1 NC_022364.1 regulates the flagellar specific sigma28 transcription factor; Derived by automated computational analysis using gene prediction method: Protein Homology.; anti-sigma28 factor FlgM 1185853 16978785 LY180_05560 Escherichia coli LY180 anti-sigma28 factor FlgM YP_008564229.1 1185560 R 1335916 CDS YP_008564230.1 544389818 16978786 complement(1185929..1186588) 1 NC_022364.1 required for the assembly of the flagellar basal body P-ring; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar basal body P-ring biosynthesis protein FlgA 1186588 flgA 16978786 flgA Escherichia coli LY180 flagellar basal body P-ring biosynthesis protein FlgA YP_008564230.1 1185929 R 1335916 CDS YP_008564231.1 544389819 16978788 1187164..1187568 1 NC_022364.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar basal body rod protein FlgC 1187568 flgC 16978788 flgC Escherichia coli LY180 flagellar basal body rod protein FlgC YP_008564231.1 1187164 D 1335916 CDS YP_008564232.1 544389820 16978789 1187580..1188275 1 NC_022364.1 acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar basal body rod modification protein 1188275 flgD 16978789 flgD Escherichia coli LY180 flagellar basal body rod modification protein YP_008564232.1 1187580 D 1335916 CDS YP_008564233.1 544389821 16978790 1188300..1189508 1 NC_022364.1 the hook connects flagellar basal body to the flagellar filament; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar hook protein FlgE 1189508 flgE 16978790 flgE Escherichia coli LY180 flagellar hook protein FlgE YP_008564233.1 1188300 D 1335916 CDS YP_008564234.1 544389822 16978791 1189528..1190283 1 NC_022364.1 FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar basal body rod protein FlgF 1190283 flgF 16978791 flgF Escherichia coli LY180 flagellar basal body rod protein FlgF YP_008564234.1 1189528 D 1335916 CDS YP_008564235.1 544389823 16978792 1190455..1191237 1 NC_022364.1 makes up the distal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar basal body rod protein FlgG 1191237 flgG 16978792 flgG Escherichia coli LY180 flagellar basal body rod protein FlgG YP_008564235.1 1190455 D 1335916 CDS YP_008564236.1 544389824 16978793 1191290..1191988 1 NC_022364.1 part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar basal body L-ring protein 1191988 flgH 16978793 flgH Escherichia coli LY180 flagellar basal body L-ring protein YP_008564236.1 1191290 D 1335916 CDS YP_008564237.1 544389825 16978794 1192000..1193097 1 NC_022364.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar basal body P-ring protein 1193097 flgI 16978794 flgI Escherichia coli LY180 flagellar basal body P-ring protein YP_008564237.1 1192000 D 1335916 CDS YP_008564238.1 544389826 16978795 1193097..1194038 1 NC_022364.1 Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar rod assembly protein FlgJ 1194038 flgJ 16978795 flgJ Escherichia coli LY180 flagellar rod assembly protein FlgJ YP_008564238.1 1193097 D 1335916 CDS YP_008564239.1 544389827 16978796 1194104..1195747 1 NC_022364.1 with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar hook-associated protein FlgK 1195747 flgK 16978796 flgK Escherichia coli LY180 flagellar hook-associated protein FlgK YP_008564239.1 1194104 D 1335916 CDS YP_008564240.1 544389828 16978797 1195759..1196712 1 NC_022364.1 with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar hook-associated protein FlgL 1196712 flgL 16978797 flgL Escherichia coli LY180 flagellar hook-associated protein FlgL YP_008564240.1 1195759 D 1335916 CDS YP_008564241.1 544389829 16978798 complement(1196909..1200094) 1 NC_022364.1 bifunctional ribonuclease E/endoribonuclease/RNA-binding protein/RNA degradosome binding protein; forms part of the membrane-associated degradosome complex along with PNPase, RhlB, and enolase; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonuclease E 1200094 rne 16978798 rne Escherichia coli LY180 ribonuclease E YP_008564241.1 1196909 R 1335916 CDS YP_008564242.1 544389830 16978799 1200175..1200549 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1200549 16978799 LY180_05630 Escherichia coli LY180 hypothetical protein YP_008564242.1 1200175 D 1335916 CDS YP_008564243.1 544389831 16978800 1200667..1201626 1 NC_022364.1 catalyzes the transformation of uracil to pseudouracil at nucleotides U955, U2504, and U2580 in 23S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; 23S rRNA pseudouridylate synthase C 1201626 16978800 LY180_05635 Escherichia coli LY180 23S rRNA pseudouridylate synthase C YP_008564243.1 1200667 D 1335916 CDS YP_008564244.1 544389832 16978801 complement(1201738..1202322) 1 NC_022364.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; Maf 1202322 16978801 LY180_05640 Escherichia coli LY180 Maf YP_008564244.1 1201738 R 1335916 CDS YP_008564245.1 544389833 16978802 1202521..1203042 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1203042 16978802 LY180_05645 Escherichia coli LY180 hypothetical protein YP_008564245.1 1202521 D 1335916 CDS YP_008564246.1 544389834 16978803 1203094..1203267 1 NC_022364.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L32 1203267 rpmF 16978803 rpmF Escherichia coli LY180 50S ribosomal protein L32 YP_008564246.1 1203094 D 1335916 CDS YP_008564247.1 544389835 16978804 1203348..1204418 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphate acyltransferase 1204418 16978804 LY180_05655 Escherichia coli LY180 phosphate acyltransferase YP_008564247.1 1203348 D 1335916 CDS YP_008564248.1 544389836 16978805 1204486..1205439 1 NC_022364.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-oxoacyl-ACP synthase 1205439 16978805 LY180_05660 Escherichia coli LY180 3-oxoacyl-ACP synthase YP_008564248.1 1204486 D 1335916 CDS YP_008564249.1 544389837 16978806 1205455..1206384 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; malonyl CoA-ACP transacylase 1206384 16978806 LY180_05665 Escherichia coli LY180 malonyl CoA-ACP transacylase YP_008564249.1 1205455 D 1335916 CDS YP_008564250.1 544389838 16978807 1206397..1207131 1 NC_022364.1 catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-ketoacyl-ACP reductase 1207131 fabG 16978807 fabG Escherichia coli LY180 3-ketoacyl-ACP reductase YP_008564250.1 1206397 D 1335916 CDS YP_008564251.1 544389839 16978808 1207342..1207578 1 NC_022364.1 carries the fatty acid chain in fatty acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; acyl carrier protein 1207578 acpP 16978808 acpP Escherichia coli LY180 acyl carrier protein YP_008564251.1 1207342 D 1335916 CDS YP_008564252.1 544389840 16978809 1207666..1208907 1 NC_022364.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-oxoacyl-ACP synthase 1208907 16978809 LY180_05680 Escherichia coli LY180 3-oxoacyl-ACP synthase YP_008564252.1 1207666 D 1335916 CDS YP_008564253.1 544389841 16978810 1209027..1209836 1 NC_022364.1 catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 4-amino-4-deoxychorismate lyase 1209836 16978810 LY180_05685 Escherichia coli LY180 4-amino-4-deoxychorismate lyase YP_008564253.1 1209027 D 1335916 CDS YP_008564254.1 544389842 16978811 1209839..1210861 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; aminodeoxychorismate lyase 1210861 16978811 LY180_05690 Escherichia coli LY180 aminodeoxychorismate lyase YP_008564254.1 1209839 D 1335916 CDS YP_008564255.1 544389843 16978812 1210851..1211492 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; thymidylate kinase 1211492 16978812 LY180_05695 Escherichia coli LY180 thymidylate kinase YP_008564255.1 1210851 D 1335916 CDS YP_008564256.1 544389844 16978813 1211489..1212493 1 NC_022364.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA polymerase III subunit delta' 1212493 16978813 LY180_05700 Escherichia coli LY180 DNA polymerase III subunit delta' YP_008564256.1 1211489 D 1335916 CDS YP_008564257.1 544389845 16978814 1212504..1213301 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNAse 1213301 16978814 LY180_05705 Escherichia coli LY180 DNAse YP_008564257.1 1212504 D 1335916 CDS YP_008564258.1 544389846 16978815 1213596..1215029 1 NC_022364.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS glucose transporter subunit IIBC 1215029 16978815 LY180_05710 Escherichia coli LY180 PTS glucose transporter subunit IIBC YP_008564258.1 1213596 D 1335916 CDS YP_008564259.1 544389847 16978816 complement(1215089..1217278) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ferric-rhodotorulic acid outer membrane transporter 1217278 16978816 LY180_05715 Escherichia coli LY180 ferric-rhodotorulic acid outer membrane transporter YP_008564259.1 1215089 R 1335916 CDS YP_008564260.1 544389848 16978817 1217612..1217971 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; purine nucleoside phosphoramidase 1217971 16978817 LY180_05720 Escherichia coli LY180 purine nucleoside phosphoramidase YP_008564260.1 1217612 D 1335916 CDS YP_008564261.1 544389849 16978818 1217974..1218351 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1218351 16978818 LY180_05725 Escherichia coli LY180 membrane protein YP_008564261.1 1217974 D 1335916 CDS YP_008564262.1 544389850 16978819 1218365..1219006 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; penicillin-binding protein activator LpoB 1219006 16978819 LY180_05730 Escherichia coli LY180 penicillin-binding protein activator LpoB YP_008564262.1 1218365 D 1335916 CDS YP_008564263.1 544389851 16978820 1218987..1219811 1 NC_022364.1 catalyzes the phosphorylation of thiamine to thiamine phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; thiamine kinase 1219811 thiK 16978820 thiK Escherichia coli LY180 thiamine kinase YP_008564263.1 1218987 D 1335916 CDS YP_008564264.1 544389852 16978821 1219822..1220847 1 NC_022364.1 hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides; Derived by automated computational analysis using gene prediction method: Protein Homology.; beta-hexosaminidase 1220847 16978821 LY180_05740 Escherichia coli LY180 beta-hexosaminidase YP_008564264.1 1219822 D 1335916 CDS YP_008564265.1 544389853 16978822 1220870..1221412 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1221412 16978822 LY180_05745 Escherichia coli LY180 hypothetical protein YP_008564265.1 1220870 D 1335916 CDS YP_008564266.1 544389854 16978823 1221820..1223124 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; NADH dehydrogenase 1223124 16978823 LY180_05750 Escherichia coli LY180 NADH dehydrogenase YP_008564266.1 1221820 D 1335916 CDS YP_008564267.1 544389855 16978824 1223334..1223873 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1223873 16978824 LY180_05755 Escherichia coli LY180 hypothetical protein YP_008564267.1 1223334 D 1335916 CDS YP_008564268.1 544389856 16978825 complement(1223935..1224645) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; TetR family transcriptional regulator 1224645 16978825 LY180_05760 Escherichia coli LY180 TetR family transcriptional regulator YP_008564268.1 1223935 R 1335916 CDS YP_008564269.1 544389857 16978826 1224808..1225065 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; multiple stress resistance protein BhsA 1225065 16978826 LY180_05765 Escherichia coli LY180 multiple stress resistance protein BhsA YP_008564269.1 1224808 D 1335916 CDS YP_008564270.1 544389858 16978827 complement(1225148..1226110) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptigoglycan-binding protein LysM 1226110 16978827 LY180_05770 Escherichia coli LY180 peptigoglycan-binding protein LysM YP_008564270.1 1225148 R 1335916 CDS YP_008564271.1 544389859 16978828 complement(1226254..1229700) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcription-repair coupling factor 1229700 16978828 LY180_05775 Escherichia coli LY180 transcription-repair coupling factor YP_008564271.1 1226254 R 1335916 CDS YP_008564272.1 544389860 16978829 complement(1229828..1230901) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1230901 16978829 LY180_05780 Escherichia coli LY180 membrane protein YP_008564272.1 1229828 R 1335916 CDS YP_008564273.1 544389861 16978830 1231163..1232362 1 NC_022364.1 part of the ATP-dependent transport system LolCDE; responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 1232362 16978830 LY180_05785 Escherichia coli LY180 transporter YP_008564273.1 1231163 D 1335916 CDS YP_008564274.1 544389862 16978831 1232355..1233056 1 NC_022364.1 ATP-binding protein of an ATP-binding cassette transporter; when bound to FtsX, FtsEX localizes to the cell division site and plays a role in the assembly or stability of the septal ring under low-salt growth conditions; Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division protein FtsE 1233056 16978831 LY180_05790 Escherichia coli LY180 cell division protein FtsE YP_008564274.1 1232355 D 1335916 CDS YP_008564275.1 544389863 16978832 1233056..1234300 1 NC_022364.1 part of the ATP-dependent transport system LolCDE; responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 1234300 16978832 LY180_05795 Escherichia coli LY180 transporter YP_008564275.1 1233056 D 1335916 CDS YP_008564276.1 544389864 16978833 1234329..1235240 1 NC_022364.1 catalyzes the formation of N-acetyl-D-glucosamine-6-phosphate from N-acetyl-D-glucosamine; Derived by automated computational analysis using gene prediction method: Protein Homology.; N-acetyl-D-glucosamine kinase 1235240 16978833 LY180_05800 Escherichia coli LY180 N-acetyl-D-glucosamine kinase YP_008564276.1 1234329 D 1335916 CDS YP_008564277.1 544389865 16978834 1235256..1236077 1 NC_022364.1 Modulates the activities of several enzymes which are inactive in their acetylated form; Derived by automated computational analysis using gene prediction method: Protein Homology.; NAD-dependent deacetylase 1236077 16978834 LY180_05805 Escherichia coli LY180 NAD-dependent deacetylase YP_008564277.1 1235256 D 1335916 CDS YP_008564278.1 544389866 16978835 complement(1236216..1237004) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1237004 16978835 LY180_05810 Escherichia coli LY180 membrane protein YP_008564278.1 1236216 R 1335916 CDS YP_008564279.1 544389867 16978836 complement(1237001..1237462) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1237462 16978836 LY180_05815 Escherichia coli LY180 membrane protein YP_008564279.1 1237001 R 1335916 CDS YP_008564280.1 544389868 16978837 complement(1237520..1238566) 1 NC_022364.1 can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotD is a periplasmic component that binds the substrate; Derived by automated computational analysis using gene prediction method: Protein Homology.; putrescine/spermidine ABC transporter substrate-binding protein 1238566 potD 16978837 potD Escherichia coli LY180 putrescine/spermidine ABC transporter substrate-binding protein YP_008564280.1 1237520 R 1335916 CDS YP_008564281.1 544389869 16978838 complement(1238563..1239357) 1 NC_022364.1 can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotC is a membrane component; Derived by automated computational analysis using gene prediction method: Protein Homology.; putrescine/spermidine ABC transporter permease 1239357 potC 16978838 potC Escherichia coli LY180 putrescine/spermidine ABC transporter permease YP_008564281.1 1238563 R 1335916 CDS YP_008564282.1 544389870 16978839 complement(1239354..1240211) 1 NC_022364.1 can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotB is a membrane component; Derived by automated computational analysis using gene prediction method: Protein Homology.; putrescine/spermidine ABC transporter permease 1240211 potB 16978839 potB Escherichia coli LY180 putrescine/spermidine ABC transporter permease YP_008564282.1 1239354 R 1335916 CDS YP_008564283.1 544389871 16978840 complement(1240195..1241331) 1 NC_022364.1 functions together with PotBCD (A2BCD) in ATP-dependent polyamine transport; PotA is the membrane-associated ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.; putrescine/spermidine ABC transporter ATPase 1241331 potA 16978840 potA Escherichia coli LY180 putrescine/spermidine ABC transporter ATPase YP_008564283.1 1240195 R 1335916 CDS YP_008564284.1 544389872 16978841 1241581..1242810 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidase T 1242810 16978841 LY180_05840 Escherichia coli LY180 peptidase T YP_008564284.1 1241581 D 1335916 CDS YP_008564285.1 544389873 16978842 complement(1242956..1244077) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1244077 16978842 LY180_05845 Escherichia coli LY180 hypothetical protein YP_008564285.1 1242956 R 1335916 CDS YP_008564286.1 544389874 16978843 complement(1244153..1245613) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sensor protein PhoQ 1245613 16978843 LY180_05850 Escherichia coli LY180 sensor protein PhoQ YP_008564286.1 1244153 R 1335916 CDS YP_008564287.1 544389875 16978844 complement(1245613..1246284) 1 NC_022364.1 response regulator in two-component regulatory system with PhoQ; involved in magnesium starvation and stress; Derived by automated computational analysis using gene prediction method: Protein Homology.; PhoP family transcriptional regulator 1246284 16978844 LY180_05855 Escherichia coli LY180 PhoP family transcriptional regulator YP_008564287.1 1245613 R 1335916 CDS YP_008564288.1 544389876 16978845 complement(1246452..1247822) 1 NC_022364.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; Derived by automated computational analysis using gene prediction method: Protein Homology.; adenylosuccinate lyase 1247822 16978845 LY180_05860 Escherichia coli LY180 adenylosuccinate lyase YP_008564288.1 1246452 R 1335916 CDS YP_008564289.1 544389877 16978846 complement(1247826..1248473) 1 NC_022364.1 HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis; Derived by automated computational analysis using gene prediction method: Protein Homology.; lysogenization regulator 1248473 16978846 LY180_05865 Escherichia coli LY180 lysogenization regulator YP_008564289.1 1247826 R 1335916 CDS YP_008564290.1 544389878 16978847 complement(1248503..1249609) 1 NC_022364.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.; thiouridylase 1249609 mnmA 16978847 mnmA Escherichia coli LY180 thiouridylase YP_008564290.1 1248503 R 1335916 CDS YP_008564291.1 544389879 16978848 complement(1249663..1250124) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphatase 1250124 16978848 LY180_05875 Escherichia coli LY180 phosphatase YP_008564291.1 1249663 R 1335916 CDS YP_008564292.1 544389880 16978849 complement(1250134..1250787) 1 NC_022364.1 catalyzes the formation of pseudouridine from uracil-2457 in 23S ribosomal RNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; 23S rRNA pseudouridine synthase E 1250787 16978849 LY180_05880 Escherichia coli LY180 23S rRNA pseudouridine synthase E YP_008564292.1 1250134 R 1335916 CDS YP_008564293.1 544389881 16978850 1250959..1252209 1 NC_022364.1 Converts isocitrate to alpha ketoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.; isocitrate dehydrogenase 1252209 16978850 LY180_05885 Escherichia coli LY180 isocitrate dehydrogenase YP_008564293.1 1250959 D 1335916 CDS YP_008564294.1 544389882 16978851 complement(1252312..1252635) 1 NC_022364.1 interacts RssB preventing the degradation of the stress sigma factor RpoS; Derived by automated computational analysis using gene prediction method: Protein Homology.; anti-adapter protein IraM 1252635 16978851 LY180_05890 Escherichia coli LY180 anti-adapter protein IraM YP_008564294.1 1252312 R 1335916 CDS YP_008564295.1 544389883 16978852 complement(1253331..1253735) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1253735 16978852 LY180_05895 Escherichia coli LY180 hypothetical protein YP_008564295.1 1253331 R 1335916 CDS YP_008564296.1 544389884 16978853 complement(1253956..1254687) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; MerR family transcriptional regulator 1254687 16978853 LY180_05900 Escherichia coli LY180 MerR family transcriptional regulator YP_008564296.1 1253956 R 1335916 CDS YP_008564297.1 544389885 16978854 complement(1254892..1256103) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; diguanylate phosphodiesterase 1256103 16978854 LY180_05905 Escherichia coli LY180 diguanylate phosphodiesterase YP_008564297.1 1254892 R 1335916 CDS YP_008564298.1 544389886 16978855 1256417..1256653 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; two-component-system connector protein YcgZ 1256653 16978855 LY180_05910 Escherichia coli LY180 two-component-system connector protein YcgZ YP_008564298.1 1256417 D 1335916 CDS YP_008564299.1 544389887 16978856 1256696..1256968 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; two-component-system connector protein YmgA 1256968 16978856 LY180_05915 Escherichia coli LY180 two-component-system connector protein YmgA YP_008564299.1 1256696 D 1335916 CDS YP_008564300.1 544389888 16978857 1256997..1257263 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; two-component-system connector protein AriR 1257263 16978857 LY180_05920 Escherichia coli LY180 two-component-system connector protein AriR YP_008564300.1 1256997 D 1335916 CDS YP_008564301.1 544389889 16978858 1257376..1257624 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1257624 16978858 LY180_05925 Escherichia coli LY180 hypothetical protein YP_008564301.1 1257376 D 1335916 CDS YP_008564302.1 544389890 16978859 1257956..1259479 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cyclic di-GMP phosphodiesterase 1259479 16978859 LY180_05930 Escherichia coli LY180 cyclic di-GMP phosphodiesterase YP_008564302.1 1257956 D 1335916 CDS YP_008564303.1 544389891 16978860 1259611..1259829 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1259829 16978860 LY180_05935 Escherichia coli LY180 membrane protein YP_008564303.1 1259611 D 1335916 CDS YP_008564304.1 544392891 16978861 1260229..1260438 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; ATPase 1260438 16978861 LY180_05940 Escherichia coli LY180 ATPase YP_008564304.1 1260229 D 1335916 CDS YP_008564305.1 544392892 16978862 1260846..1262876 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1262876 16978862 LY180_05945 Escherichia coli LY180 hypothetical protein YP_008564305.1 1260846 D 1335916 CDS YP_008564306.1 544389892 16978863 complement(1262933..1263262) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1263262 16978863 LY180_05950 Escherichia coli LY180 hypothetical protein YP_008564306.1 1262933 R 1335916 CDS YP_008564307.1 544389893 16978864 complement(1263272..1263616) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1263616 16978864 LY180_05955 Escherichia coli LY180 hypothetical protein YP_008564307.1 1263272 R 1335916 CDS YP_008564308.1 544392893 16978865 1264294..1264536 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1264536 16978865 LY180_05960 Escherichia coli LY180 hypothetical protein YP_008564308.1 1264294 D 1335916 CDS YP_008564309.1 544389894 16978866 complement(1264908..1265174) 1 NC_022364.1 works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division topological specificity factor MinE 1265174 minE 16978866 minE Escherichia coli LY180 cell division topological specificity factor MinE YP_008564309.1 1264908 R 1335916 CDS YP_008564310.1 544389895 16978867 complement(1265178..1265990) 1 NC_022364.1 ATPase; with MinC inhibits cell division by blocking formation of the polar Z ring septums; Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division inhibitor MinD 1265990 16978867 LY180_05970 Escherichia coli LY180 cell division inhibitor MinD YP_008564310.1 1265178 R 1335916 CDS YP_008564311.1 544389896 16978868 complement(1266014..1266709) 1 NC_022364.1 blocks the formation of polar Z-ring septums; Derived by automated computational analysis using gene prediction method: Protein Homology.; septum formation inhibitor 1266709 minC 16978868 minC Escherichia coli LY180 septum formation inhibitor YP_008564311.1 1266014 R 1335916 CDS YP_008564312.1 544389897 16978869 1267229..1267597 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1267597 16978869 LY180_05980 Escherichia coli LY180 hypothetical protein YP_008564312.1 1267229 D 1335916 CDS YP_008564313.1 544389898 16978870 complement(1267717..1268118) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Inhibitor of g-type lysozyme 1268118 16978870 LY180_05985 Escherichia coli LY180 Inhibitor of g-type lysozyme YP_008564313.1 1267717 R 1335916 CDS YP_008564314.1 544389899 16978872 1268327..1268653 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1268653 16978872 LY180_05995 Escherichia coli LY180 hypothetical protein YP_008564314.1 1268327 D 1335916 CDS YP_008564315.1 544389900 16978873 1268725..1269384 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1269384 16978873 LY180_06000 Escherichia coli LY180 hypothetical protein YP_008564315.1 1268725 D 1335916 CDS YP_008564316.1 544389901 16978874 1269461..1269922 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1269922 16978874 LY180_06005 Escherichia coli LY180 hypothetical protein YP_008564316.1 1269461 D 1335916 CDS YP_008564317.1 544389902 16982293 1271411..1271830 1 NC_022364.1 binds with UmuC protein to form functional DNA pol V (UmuD'2UmuC); involved in translesion polymerization; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA polymerase V subunit UmuD 1271830 16982293 LY180_06010 Escherichia coli LY180 DNA polymerase V subunit UmuD YP_008564317.1 1271411 D 1335916 CDS YP_008564318.1 544389903 16978876 1271830..1273098 1 NC_022364.1 binds processed UmuD protein to form functional DNA pol V (UmuD'2UmuC); involved in translesion polymerization; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA polymerase V subunit UmuC 1273098 16978876 LY180_06015 Escherichia coli LY180 DNA polymerase V subunit UmuC YP_008564318.1 1271830 D 1335916 CDS YP_008564319.1 544389904 16978877 complement(1273144..1273674) 1 NC_022364.1 disulfide oxidoreductase; integral membrane protein; required for perioplasmic disulfide bond formation; oxidizes DsbA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; disulfide bond formation protein DsbB 1273674 16978877 LY180_06020 Escherichia coli LY180 disulfide bond formation protein DsbB YP_008564319.1 1273144 R 1335916 CDS YP_008564320.1 544389905 16978878 complement(1273820..1275361) 1 NC_022364.1 involved in regulation of intracellular pH under alkaline conditions; Derived by automated computational analysis using gene prediction method: Protein Homology.; sodium:proton antiporter 1275361 nhaB 16978878 nhaB Escherichia coli LY180 sodium:proton antiporter YP_008564320.1 1273820 R 1335916 CDS YP_008564321.1 544389906 16978879 1275582..1276301 1 NC_022364.1 Multifunctional regulator of fatty acid metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.; fatty acid metabolism regulator 1276301 16978879 LY180_06030 Escherichia coli LY180 fatty acid metabolism regulator YP_008564321.1 1275582 D 1335916 CDS YP_008564322.1 544389907 16978880 complement(1276353..1277885) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; SpoVR family protein 1277885 16978880 LY180_06035 Escherichia coli LY180 SpoVR family protein YP_008564322.1 1276353 R 1335916 CDS YP_008564323.1 544389908 16978881 1278215..1279513 1 NC_022364.1 catalyzes the oxidative deamination of D-amino acids; Derived by automated computational analysis using gene prediction method: Protein Homology.; D-amino acid dehydrogenase small subunit 1279513 16978881 LY180_06040 Escherichia coli LY180 D-amino acid dehydrogenase small subunit YP_008564323.1 1278215 D 1335916 CDS YP_008564324.1 544389909 16978882 1279523..1280593 1 NC_022364.1 converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; Derived by automated computational analysis using gene prediction method: Protein Homology.; alanine racemase 1280593 16978882 LY180_06045 Escherichia coli LY180 alanine racemase YP_008564324.1 1279523 D 1335916 CDS YP_008564325.1 544389910 16978883 complement(1280979..1282715) 1 NC_022364.1 the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli; Derived by automated computational analysis using gene prediction method: Protein Homology.; potassium:proton antiporter 1282715 cvrA 16978883 cvrA Escherichia coli LY180 potassium:proton antiporter YP_008564325.1 1280979 R 1335916 CDS YP_008564326.1 544389911 16978884 complement(1282810..1283724) 1 NC_022364.1 catalyzes the release of D-alanine from L-alanyl-D-glutamyl-meso-diaminopimelyl-D-alanine; Derived by automated computational analysis using gene prediction method: Protein Homology.; L,D-carboxypeptidase A 1283724 ldcA 16978884 ldcA Escherichia coli LY180 L,D-carboxypeptidase A YP_008564326.1 1282810 R 1335916 CDS YP_008564327.1 544389912 16978885 1283824..1284435 1 NC_022364.1 catalyzes the cleavage of 1-4 beta-glycoside linkaged between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan; Derived by automated computational analysis using gene prediction method: Protein Homology.; lytic murein endotransglycosylase E 1284435 emtA 16978885 emtA Escherichia coli LY180 lytic murein endotransglycosylase E YP_008564327.1 1283824 D 1335916 CDS YP_008564328.1 544389913 16978886 complement(1284437..1285171) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar brake protein YcgR 1285171 16978886 LY180_06065 Escherichia coli LY180 flagellar brake protein YcgR YP_008564328.1 1284437 R 1335916 CDS YP_008564329.1 544389914 16978887 1285372..1285626 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1285626 16978887 LY180_06070 Escherichia coli LY180 hypothetical protein YP_008564329.1 1285372 D 1335916 CDS YP_008564330.1 544389915 16978888 1285804..1286244 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1286244 16978888 LY180_06075 Escherichia coli LY180 hypothetical protein YP_008564330.1 1285804 D 1335916 CDS YP_008564331.1 544389916 16978889 complement(1286323..1288020) 1 NC_022364.1 periplasmic; catalyzes the hydrolysis of trehalose to glucose which can then be imported into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; trehalase 1288020 treA 16978889 treA Escherichia coli LY180 trehalase YP_008564331.1 1286323 R 1335916 CDS YP_008564332.1 544389917 16978890 complement(1288340..1289758) 1 NC_022364.1 phosphotransferaese subunit; phosphorylates dihydroxyacetone along with DhaK/DhaL; Derived by automated computational analysis using gene prediction method: Protein Homology.; dihydroxyacetone kinase subunit M 1289758 16978890 LY180_06085 Escherichia coli LY180 dihydroxyacetone kinase subunit M YP_008564332.1 1288340 R 1335916 CDS YP_008564333.1 544389918 16978891 complement(1289769..1290401) 1 NC_022364.1 with DhaK and DhaM catalyzes the phosphorylation of dihydroxyacetone; Derived by automated computational analysis using gene prediction method: Protein Homology.; dihydroxyacetone kinase subunit DhaL 1290401 16978891 LY180_06090 Escherichia coli LY180 dihydroxyacetone kinase subunit DhaL YP_008564333.1 1289769 R 1335916 CDS YP_008564334.1 544392894 16978892 complement(1290412..1291482) 1 NC_022364.1 with DhaL and DhaM forms dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone; DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; dihydroxyacetone kinase subunit K 1291482 16978892 LY180_06095 Escherichia coli LY180 dihydroxyacetone kinase subunit K YP_008564334.1 1290412 R 1335916 CDS YP_008564335.1 544389919 16978893 1291710..1293629 1 NC_022364.1 Positively regulates the dhaKLM operon from a sigma-70 promoter; Derived by automated computational analysis using gene prediction method: Protein Homology.; Fis family transcriptional regulator 1293629 16978893 LY180_06100 Escherichia coli LY180 Fis family transcriptional regulator YP_008564335.1 1291710 D 1335916 CDS YP_008564336.1 544392895 16982288 1296959..1297162 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 1297162 16982288 LY180_06105 Escherichia coli LY180 membrane protein YP_008564336.1 1296959 D 1335916 CDS YP_008564337.1 544389920 16978895 complement(1297455..1298546) 1 NC_022364.1 EngD; translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; Derived by automated computational analysis using gene prediction method: Protein Homology.; GTP-binding protein YchF 1298546 ychF 16978895 ychF Escherichia coli LY180 GTP-binding protein YchF YP_008564337.1 1297455 R 1335916 CDS YP_008564338.1 544389921 16978896 complement(1298663..1299247) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidyl-tRNA hydrolase 1299247 16978896 LY180_06115 Escherichia coli LY180 peptidyl-tRNA hydrolase YP_008564338.1 1298663 R 1335916 CDS YP_008564339.1 544389922 16978897 1299525..1299803 1 NC_022364.1 YchH; transcription activated by CRP (cyclic AMP receptor protein), a global transcription factor involved in regulation of metabolism in enteric bacteria; ychH presents a class II promoter to bind CRP; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1299803 16978897 LY180_06120 Escherichia coli LY180 membrane protein YP_008564339.1 1299525 D 1335916 CDS YP_008564340.1 544389923 16978898 complement(1299858..1301537) 1 NC_022364.1 role in sulfate transport across the inner membrane; member of the SulP family of sulfate transporters; seems to mediate transport via sulfate/proton symport; Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 1301537 16978898 LY180_06125 Escherichia coli LY180 transporter YP_008564340.1 1299858 R 1335916 CDS YP_008564341.1 544389924 16978899 complement(1301662..1302675) 1 NC_022364.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribose-phosphate pyrophosphokinase 1302675 16978899 LY180_06130 Escherichia coli LY180 ribose-phosphate pyrophosphokinase YP_008564341.1 1301662 R 1335916 CDS YP_008564342.1 544389925 16978900 complement(1302760..1303611) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; kinase 1303611 16978900 LY180_06135 Escherichia coli LY180 kinase YP_008564342.1 1302760 R 1335916 CDS YP_008564343.1 544389926 16978901 complement(1303611..1304234) 1 NC_022364.1 Incorporates lipoproteins in the outer membrane after they are released by the LolA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; outer membrane lipoprotein LolB 1304234 lolB 16978901 lolB Escherichia coli LY180 outer membrane lipoprotein LolB YP_008564343.1 1303611 R 1335916 CDS YP_008564344.1 544389927 16978902 1304448..1305704 1 NC_022364.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutamyl-tRNA reductase 1305704 hemA 16978902 hemA Escherichia coli LY180 glutamyl-tRNA reductase YP_008564344.1 1304448 D 1335916 CDS YP_008564345.1 544389928 16978903 1305746..1306828 1 NC_022364.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide chain release factor 1 1306828 prfA 16978903 prfA Escherichia coli LY180 peptide chain release factor 1 YP_008564345.1 1305746 D 1335916 CDS YP_008564346.1 544389929 16978904 1306828..1307661 1 NC_022364.1 HemK; PrmC; transfers a methyl group from S-adenosylmethionine to amide nitrogen of specific glutamine residues in protein chain release factors PrfA and PrfB; Derived by automated computational analysis using gene prediction method: Protein Homology.; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 1307661 16978904 LY180_06155 Escherichia coli LY180 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase YP_008564346.1 1306828 D 1335916 CDS YP_008564347.1 544389930 16978905 1307658..1308050 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1308050 16978905 LY180_06160 Escherichia coli LY180 hypothetical protein YP_008564347.1 1307658 D 1335916 CDS YP_008564348.1 544389931 16978906 1308054..1308863 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1308863 16978906 LY180_06165 Escherichia coli LY180 hypothetical protein YP_008564348.1 1308054 D 1335916 CDS YP_008564349.1 544389932 16978907 1308899..1309753 1 NC_022364.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-dehydro-3-deoxyphosphooctonate aldolase 1309753 16978907 LY180_06170 Escherichia coli LY180 2-dehydro-3-deoxyphosphooctonate aldolase YP_008564349.1 1308899 D 1335916 CDS YP_008564350.1 544392896 16978908 complement(1309902..1310009) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1310009 16978908 LY180_06175 Escherichia coli LY180 hypothetical protein YP_008564350.1 1309902 R 1335916 CDS YP_008564351.1 544392897 16978909 complement(1310437..1310544) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1310544 16978909 LY180_06180 Escherichia coli LY180 hypothetical protein YP_008564351.1 1310437 R 1335916 CDS YP_008564352.1 544392898 16978910 complement(1310973..1311080) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1311080 16978910 LY180_06185 Escherichia coli LY180 hypothetical protein YP_008564352.1 1310973 R 1335916 CDS YP_008564353.1 544389933 16978911 complement(1311485..1312561) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sodium:proton antiporter 1312561 16978911 LY180_06190 Escherichia coli LY180 sodium:proton antiporter YP_008564353.1 1311485 R 1335916 CDS YP_008564354.1 544392899 16978912 complement(1312558..1313766) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1313766 16978912 LY180_06195 Escherichia coli LY180 hypothetical protein YP_008564354.1 1312558 R 1335916 CDS YP_008564355.1 544389934 16978913 1314193..1314423 1 NC_022364.1 in Escherichia coli this protein putatively regulates the sodium/proton (also pH-independent calcium/proton) antiporter chaA; has weak affinity for calcium and magnesium ions; Derived by automated computational analysis using gene prediction method: Protein Homology.; cation transport regulator 1314423 chaB 16978913 chaB Escherichia coli LY180 cation transport regulator YP_008564355.1 1314193 D 1335916 CDS YP_008564356.1 544389935 16978914 complement(1315319..1315672) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1315672 16978914 LY180_06205 Escherichia coli LY180 hypothetical protein YP_008564356.1 1315319 R 1335916 CDS YP_008564357.1 544389936 16978915 1315857..1317251 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; invasin 1317251 16978915 LY180_06210 Escherichia coli LY180 invasin YP_008564357.1 1315857 D 1335916 CDS YP_008564358.1 544389937 16978916 complement(1317252..1317902) 1 NC_022364.1 two-component response regulator NarL; phosphorylated by NarQ; activates transcription of nitrate and nitrite reductase genes and represses transcription of fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 1317902 16978916 LY180_06215 Escherichia coli LY180 transcriptional regulator YP_008564358.1 1317252 R 1335916 CDS YP_008564359.1 544389938 16978917 complement(1317895..1319691) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrate/nitrite sensor protein NarX 1319691 16978917 LY180_06220 Escherichia coli LY180 nitrate/nitrite sensor protein NarX YP_008564359.1 1317895 R 1335916 CDS YP_008564360.1 544389939 16978918 1320030..1321421 1 NC_022364.1 involved in the transport of nitrate and nitrite; Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrate transporter 1321421 16978918 LY180_06225 Escherichia coli LY180 nitrate transporter YP_008564360.1 1320030 D 1335916 CDS YP_008564361.1 544389940 16978919 1321937..1325680 1 NC_022364.1 with NarYV catalyzes the reduction of nitrate; the beta subunit is an iron sulfur cluster containing electron transfer subunit; one of 3 nitrate reductases in E. coli; expression of nitrate reductase Z is not dependent on nitrate levels; Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrate reductase A subunit alpha 1325680 narZ 16978919 narZ Escherichia coli LY180 nitrate reductase A subunit alpha YP_008564361.1 1321937 D 1335916 CDS YP_008564362.1 544389941 16978920 1325677..1327215 1 NC_022364.1 with NarGJI catalyzes the reduction of nitrate; the beta subunit is an iron sulfur cluster containing electron transfer subunit; one of 3 nitrate reductases in E. coli and in E. coli is expressed when nitrate levels are high; Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrate reductase A subunit beta 1327215 narH 16978920 narH Escherichia coli LY180 nitrate reductase A subunit beta YP_008564362.1 1325677 D 1335916 CDS YP_008564363.1 544389942 16978921 1327212..1327922 1 NC_022364.1 delta subunit of nitrate reductase 1; chaperone for the insertion of the molybdenum cofactor and assembly of nitrate reductase 1; Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrate reductase molybdenum cofactor assembly chaperone NarJ 1327922 16978921 LY180_06240 Escherichia coli LY180 nitrate reductase molybdenum cofactor assembly chaperone NarJ YP_008564363.1 1327212 D 1335916 CDS YP_008564364.1 544389943 16978922 1327922..1328599 1 NC_022364.1 with NarGJH catalyzes the reduction of nitrate; the gamma subunit localizes NarGHI to the membrane; one of 3 nitrate reductases in E. coli and in E. coli is expressed when nitrate levels are high; Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrate reductase A subunit gamma 1328599 narI 16978922 narI Escherichia coli LY180 nitrate reductase A subunit gamma YP_008564364.1 1327922 D 1335916 CDS YP_008564365.1 544392900 16978923 1328782..1328961 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1328961 16978923 LY180_06250 Escherichia coli LY180 hypothetical protein YP_008564365.1 1328782 D 1335916 CDS YP_008564366.1 544389944 16978926 complement(1329325..1330167) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; formyltetrahydrofolate deformylase 1330167 16978926 LY180_06265 Escherichia coli LY180 formyltetrahydrofolate deformylase YP_008564366.1 1329325 R 1335916 CDS YP_008564367.1 544392901 16978927 complement(1330217..1330576) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1330576 16978927 LY180_06270 Escherichia coli LY180 hypothetical protein YP_008564367.1 1330217 R 1335916 CDS YP_008564368.1 544389945 16978928 1330788..1331693 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1331693 16978928 LY180_06275 Escherichia coli LY180 hypothetical protein YP_008564368.1 1330788 D 1335916 CDS YP_008564369.1 544389946 16978929 1331785..1332798 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; response regulator 1332798 16978929 LY180_06280 Escherichia coli LY180 response regulator YP_008564369.1 1331785 D 1335916 CDS YP_008564370.1 544389947 16978930 1333000..1333908 1 NC_022364.1 together with GalF subunit composes the UTP--glucose-1-phosphate uridylyltransferase, an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate; regulates cellular levels of UDP-glucose; Derived by automated computational analysis using gene prediction method: Protein Homology.; UTP--glucose-1-phosphate uridylyltransferase subunit GalU 1333908 16978930 LY180_06285 Escherichia coli LY180 UTP--glucose-1-phosphate uridylyltransferase subunit GalU YP_008564370.1 1333000 D 1335916 CDS YP_008564371.1 544389948 16978931 complement(1334052..1334465) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA-binding protein 1334465 16978931 LY180_06290 Escherichia coli LY180 DNA-binding protein YP_008564371.1 1334052 R 1335916 CDS YP_008564372.1 544389949 16978932 1335070..1335687 1 NC_022364.1 catalyzes the formation of thymidine 5'-phosphate from thymidine; Derived by automated computational analysis using gene prediction method: Protein Homology.; thymidine kinase 1335687 16978932 LY180_06295 Escherichia coli LY180 thymidine kinase YP_008564372.1 1335070 D 1335916 CDS YP_008564373.1 544392902 16978933 complement(1335989..1336492) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; bifunctional acetaldehyde-CoA/alcohol dehydrogenase 1336492 16978933 LY180_06300 Escherichia coli LY180 bifunctional acetaldehyde-CoA/alcohol dehydrogenase YP_008564373.1 1335989 R 1335916 CDS YP_008564374.1 544392903 16978934 complement(1336964..1337920) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; lipase 1337920 16978934 LY180_06305 Escherichia coli LY180 lipase YP_008564374.1 1336964 R 1335916 CDS YP_008564375.1 544392904 16978935 complement(1338139..1338708) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; alcohol dehydrogenase 1338708 16978935 LY180_06310 Escherichia coli LY180 alcohol dehydrogenase YP_008564375.1 1338139 R 1335916 CDS YP_008564376.1 544389950 16978936 1339185..1339832 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1339832 16978936 LY180_06315 Escherichia coli LY180 membrane protein YP_008564376.1 1339185 D 1335916 CDS YP_008564377.1 544389951 16978937 1340525..1342201 1 NC_022364.1 is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide ABC transporter substrate-binding protein 1342201 16978937 LY180_06320 Escherichia coli LY180 peptide ABC transporter substrate-binding protein YP_008564377.1 1340525 D 1335916 CDS YP_008564378.1 544389952 16978938 1342287..1343207 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide ABC transporter permease 1343207 oppB 16978938 oppB Escherichia coli LY180 peptide ABC transporter permease YP_008564378.1 1342287 D 1335916 CDS YP_008564379.1 544389953 16978939 1343222..1344130 1 NC_022364.1 with OppABDF is involved in the transport of oligopeptides of up to 5 amino acids into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide ABC transporter permease 1344130 16978939 LY180_06330 Escherichia coli LY180 peptide ABC transporter permease YP_008564379.1 1343222 D 1335916 CDS YP_008564380.1 544389954 16978940 1344142..1345155 1 NC_022364.1 DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide ABC transporter ATP-binding protein 1345155 dppD 16978940 dppD Escherichia coli LY180 peptide ABC transporter ATP-binding protein YP_008564380.1 1344142 D 1335916 CDS YP_008564381.1 544389955 16978941 1345152..1346156 1 NC_022364.1 Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide ABC transporter ATP-binding protein 1346156 dppF 16978941 dppF Escherichia coli LY180 peptide ABC transporter ATP-binding protein YP_008564381.1 1345152 D 1335916 CDS YP_008564382.1 544389956 16978942 complement(1346209..1346538) 1 NC_022364.1 highly acidic protein; the structure of the Haemophilus influenzae protein shows similarity to uracil DNA glycosylase inhibitor (Ugi); binds heat-unstable protein (HU-alpha) which is a histone-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; dsDNA-mimic protein 1346538 16978942 LY180_06345 Escherichia coli LY180 dsDNA-mimic protein YP_008564382.1 1346209 R 1335916 CDS YP_008564383.1 544389957 16978943 complement(1346573..1348033) 1 NC_022364.1 catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol); Derived by automated computational analysis using gene prediction method: Protein Homology.; cardiolipin synthetase 1348033 cls 16978943 cls Escherichia coli LY180 cardiolipin synthetase YP_008564383.1 1346573 R 1335916 CDS YP_008564384.1 544389958 16978944 complement(1348404..1349657) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; voltage-gated potassium channel 1349657 16978944 LY180_06355 Escherichia coli LY180 voltage-gated potassium channel YP_008564384.1 1348404 R 1335916 CDS YP_008564385.1 544389959 16978945 complement(1349957..1350253) 1 NC_022364.1 unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity; Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1350253 16978945 LY180_06360 Escherichia coli LY180 hypothetical protein YP_008564385.1 1349957 R 1335916 CDS YP_008564386.1 544389960 16978946 1350462..1351196 1 NC_022364.1 membrane spanning protein in TonB-ExbB-ExbD complex; transduces proton motive force of the cytoplasmic membrane to outer membrane transporters; involved in the transport of ron-siderophore complexes, vitamin B12 and colicins; Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 1351196 16978946 LY180_06365 Escherichia coli LY180 transporter YP_008564386.1 1350462 D 1335916 CDS YP_008564387.1 544389961 16978947 complement(1351236..1351634) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acyl-CoA esterase 1351634 16978947 LY180_06370 Escherichia coli LY180 acyl-CoA esterase YP_008564387.1 1351236 R 1335916 CDS YP_008564388.1 544389962 16978948 complement(1351739..1352278) 1 NC_022364.1 Involved in cell division; probably involved in intracellular septation; Derived by automated computational analysis using gene prediction method: Protein Homology.; intracellular septation protein A 1352278 16978948 LY180_06375 Escherichia coli LY180 intracellular septation protein A YP_008564388.1 1351739 R 1335916 CDS YP_008564389.1 544389963 16978949 complement(1352308..1353051) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1353051 16978949 LY180_06380 Escherichia coli LY180 membrane protein YP_008564389.1 1352308 R 1335916 CDS YP_008564390.1 544389964 16978950 1353408..1354046 1 NC_022364.1 receptor for colicin S4; Derived by automated computational analysis using gene prediction method: Protein Homology.; outer membrane protein W 1354046 16978950 LY180_06385 Escherichia coli LY180 outer membrane protein W YP_008564390.1 1353408 D 1335916 CDS YP_008564391.1 544389965 16978951 complement(1354106..1354612) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1354612 16978951 LY180_06390 Escherichia coli LY180 hypothetical protein YP_008564391.1 1354106 R 1335916 CDS YP_008564392.1 544389966 16978952 complement(1354658..1355158) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1355158 16978952 LY180_06395 Escherichia coli LY180 hypothetical protein YP_008564392.1 1354658 R 1335916 CDS YP_008564393.1 544389967 16978953 complement(1355244..1355423) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1355423 16978953 LY180_06400 Escherichia coli LY180 hypothetical protein YP_008564393.1 1355244 R 1335916 CDS YP_008564394.1 544389968 16978954 complement(1355804..1356610) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tryptophan synthase subunit alpha 1356610 16978954 LY180_06405 Escherichia coli LY180 tryptophan synthase subunit alpha YP_008564394.1 1355804 R 1335916 CDS YP_008564395.1 544389969 16978955 complement(1356610..1357803) 1 NC_022364.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; tryptophan synthase subunit beta 1357803 16978955 LY180_06410 Escherichia coli LY180 tryptophan synthase subunit beta YP_008564395.1 1356610 R 1335916 CDS YP_008564396.1 544389970 16978956 complement(1357815..1359176) 1 NC_022364.1 monomeric bifunctional protein; functions in tryptophan biosynthesis pathway; phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoribosylanthranilate isomerase 1359176 16978956 LY180_06415 Escherichia coli LY180 phosphoribosylanthranilate isomerase YP_008564396.1 1357815 R 1335916 CDS YP_008564397.1 544389971 16978957 complement(1359177..1360772) 1 NC_022364.1 bifunctional anthranilate synthase II/anthranilate phosphoribosyltransferase; TrpD; forms a heterotetramer with Trp E and the complex catalyzes the formation of anthranilate from chorismate and glutamine; also catalyzes the formation of N-(5-phospho-D-ribosyl)-anthranilate from athranilate and 5-phospho-alpha-D-ribose 1-diphosphate; functions in tryptophan biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; anthranilate phosphoribosyltransferase 1360772 16978957 LY180_06420 Escherichia coli LY180 anthranilate phosphoribosyltransferase YP_008564397.1 1359177 R 1335916 CDS YP_008564398.1 544389972 16978958 complement(1360772..1362334) 1 NC_022364.1 with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; Derived by automated computational analysis using gene prediction method: Protein Homology.; anthranilate synthase subunit I 1362334 16978958 LY180_06425 Escherichia coli LY180 anthranilate synthase subunit I YP_008564398.1 1360772 R 1335916 CDS YP_008564399.1 544389973 16978959 1362608..1363489 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; S-adenosylmethionine tRNA ribosyltransferase 1363489 16978959 LY180_06430 Escherichia coli LY180 S-adenosylmethionine tRNA ribosyltransferase YP_008564399.1 1362608 D 1335916 CDS YP_008564400.1 544389974 16978960 1363486..1364106 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1364106 16978960 LY180_06435 Escherichia coli LY180 hypothetical protein YP_008564400.1 1363486 D 1335916 CDS YP_008564401.1 544389975 16978961 1364207..1365079 1 NC_022364.1 catalyzes the synthesis of pseudouridine from uracil-2605 in 23S ribosomal RNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; 23S rRNA pseudouridylate synthase B 1365079 16978961 LY180_06440 Escherichia coli LY180 23S rRNA pseudouridylate synthase B YP_008564401.1 1364207 D 1335916 CDS YP_008564402.1 544389976 16978962 complement(1365119..1365709) 1 NC_022364.1 catalyzes the formation of adenosylcobalamide from cobinamide and the formation of coenzyme B12 from cob(I)alamin; Derived by automated computational analysis using gene prediction method: Protein Homology.; cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase 1365709 16978962 LY180_06445 Escherichia coli LY180 cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase YP_008564402.1 1365119 R 1335916 CDS YP_008564403.1 544389977 16978963 complement(1365706..1366464) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; oxoacyl-ACP reductase 1366464 16978963 LY180_06450 Escherichia coli LY180 oxoacyl-ACP reductase YP_008564403.1 1365706 R 1335916 CDS YP_008564404.1 544389978 16978964 1366684..1367733 1 NC_022364.1 multicopy suppressor of htrA(degP); Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidase 1367733 16978964 LY180_06455 Escherichia coli LY180 peptidase YP_008564404.1 1366684 D 1335916 CDS YP_008564405.1 544389979 16978965 complement(1367769..1368020) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1368020 16978965 LY180_06460 Escherichia coli LY180 hypothetical protein YP_008564405.1 1367769 R 1335916 CDS YP_008564406.1 544389980 16978966 1368400..1370997 1 NC_022364.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; Derived by automated computational analysis using gene prediction method: Protein Homology.; topoisomerase I 1370997 16978966 LY180_06465 Escherichia coli LY180 topoisomerase I YP_008564406.1 1368400 D 1335916 CDS YP_008564407.1 544389981 16978967 1371207..1372181 1 NC_022364.1 LysR-type transcriptional regulator; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon; autoregulates expression; crystal structure of Klebsiella aerogenes showed tetramer formation; Derived by automated computational analysis using gene prediction method: Protein Homology.; CysB family transcriptional regulator 1372181 cysB 16978967 cysB Escherichia coli LY180 CysB family transcriptional regulator YP_008564407.1 1371207 D 1335916 CDS YP_008564408.1 544389982 16978968 1372512..1372640 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1372640 16978968 LY180_06475 Escherichia coli LY180 hypothetical protein YP_008564408.1 1372512 D 1335916 CDS YP_008564409.1 544389983 16978969 1372643..1372810 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1372810 16978969 LY180_06480 Escherichia coli LY180 hypothetical protein YP_008564409.1 1372643 D 1335916 CDS YP_008564410.1 544392905 16978970 complement(1372884..1373009) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1373009 16978970 LY180_06485 Escherichia coli LY180 hypothetical protein YP_008564410.1 1372884 R 1335916 CDS YP_008564411.1 544389984 16978971 1373183..1375858 1 NC_022364.1 Catalyzes the conversion of citrate to isocitrate; Derived by automated computational analysis using gene prediction method: Protein Homology.; aconitate hydratase 1375858 16978971 LY180_06490 Escherichia coli LY180 aconitate hydratase YP_008564411.1 1373183 D 1335916 CDS YP_008564412.1 544389985 16978972 complement(1375922..1376512) 1 NC_022364.1 catalyzes the conversion of GTP to formate and 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; GTP cyclohydrolase II 1376512 ribA 16978972 ribA Escherichia coli LY180 GTP cyclohydrolase II YP_008564412.1 1375922 R 1335916 CDS YP_008564413.1 544389986 16978973 1376682..1377446 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphatidylglycerophosphatase B 1377446 16978973 LY180_06500 Escherichia coli LY180 phosphatidylglycerophosphatase B YP_008564413.1 1376682 D 1335916 CDS YP_008564414.1 544389987 16978974 1377595..1377903 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1377903 16978974 LY180_06505 Escherichia coli LY180 membrane protein YP_008564414.1 1377595 D 1335916 CDS YP_008564415.1 544389988 16978975 1377910..1379079 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1379079 16978975 LY180_06510 Escherichia coli LY180 hypothetical protein YP_008564415.1 1377910 D 1335916 CDS YP_008564416.1 544389989 16978976 1379212..1380009 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; orotidine 5'-phosphate decarboxylase 1380009 16978976 LY180_06515 Escherichia coli LY180 orotidine 5'-phosphate decarboxylase YP_008564416.1 1379212 D 1335916 CDS YP_008564417.1 544389990 16978977 1380009..1380335 1 NC_022364.1 involved in start site selection during the initiation of translation; Derived by automated computational analysis using gene prediction method: Protein Homology.; translation initiation factor Sui1 1380335 16978977 LY180_06520 Escherichia coli LY180 translation initiation factor Sui1 YP_008564417.1 1380009 D 1335916 CDS YP_008564418.1 544389991 16978978 complement(1380461..1380679) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; lipoprotein 1380679 16978978 LY180_06525 Escherichia coli LY180 lipoprotein YP_008564418.1 1380461 R 1335916 CDS YP_008564419.1 544389992 16978979 complement(1380948..1381697) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DeoR family transcriptional regulator 1381697 16978979 LY180_06530 Escherichia coli LY180 DeoR family transcriptional regulator YP_008564419.1 1380948 R 1335916 CDS YP_008564420.1 544389993 16978980 complement(1381787..1381960) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1381960 16978980 LY180_06535 Escherichia coli LY180 hypothetical protein YP_008564420.1 1381787 R 1335916 CDS YP_008564421.1 544389994 16978981 complement(1382107..1384092) 1 NC_022364.1 c-di-GMP phosphodiesterase; probably degrades signalling molecule c-di-GMP; Derived by automated computational analysis using gene prediction method: Protein Homology.; RNase II stability modulator 1384092 16978981 LY180_06540 Escherichia coli LY180 RNase II stability modulator YP_008564421.1 1382107 R 1335916 CDS YP_008564422.1 544392906 16978982 1384146..1384292 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1384292 16978982 LY180_06545 Escherichia coli LY180 hypothetical protein YP_008564422.1 1384146 D 1335916 CDS YP_008564423.1 544389995 16978983 complement(1384329..1386263) 1 NC_022364.1 Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction; Derived by automated computational analysis using gene prediction method: Protein Homology.; exoribonuclease II 1386263 16978983 LY180_06550 Escherichia coli LY180 exoribonuclease II YP_008564423.1 1384329 R 1335916 CDS YP_008564424.1 544389996 16978984 complement(1386331..1387458) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1387458 16978984 LY180_06555 Escherichia coli LY180 hypothetical protein YP_008564424.1 1386331 R 1335916 CDS YP_008564425.1 544389997 16978985 complement(1387603..1388391) 1 NC_022364.1 Catalyzes a key regulatory step in fatty acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; enoyl-ACP reductase 1388391 16978985 LY180_06560 Escherichia coli LY180 enoyl-ACP reductase YP_008564425.1 1387603 R 1335916 CDS YP_008564426.1 544389998 16978986 complement(1388761..1389114) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1389114 16978986 LY180_06565 Escherichia coli LY180 hypothetical protein YP_008564426.1 1388761 R 1335916 CDS YP_008564427.1 544389999 16978987 complement(1389182..1389988) 1 NC_022364.1 Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide ABC transporter ATP-binding protein 1389988 dppF 16978987 dppF Escherichia coli LY180 peptide ABC transporter ATP-binding protein YP_008564427.1 1389182 R 1335916 CDS YP_008564428.1 544390000 16978988 complement(1389990..1390982) 1 NC_022364.1 DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide ABC transporter ATP-binding protein 1390982 dppD 16978988 dppD Escherichia coli LY180 peptide ABC transporter ATP-binding protein YP_008564428.1 1389990 R 1335916 CDS YP_008564429.1 544390001 16978989 complement(1390982..1391872) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide ABC transporter permease 1391872 16978989 LY180_06580 Escherichia coli LY180 peptide ABC transporter permease YP_008564429.1 1390982 R 1335916 CDS YP_008564430.1 544390002 16978990 complement(1391859..1392824) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide ABC transporter permease 1392824 16978990 LY180_06585 Escherichia coli LY180 peptide ABC transporter permease YP_008564430.1 1391859 R 1335916 CDS YP_008564431.1 544390003 16978991 complement(1392821..1394464) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide ABC transporter permease 1394464 16978991 LY180_06590 Escherichia coli LY180 peptide ABC transporter permease YP_008564431.1 1392821 R 1335916 CDS YP_008564432.1 544390004 16978992 complement(1394777..1395022) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1395022 16978992 LY180_06595 Escherichia coli LY180 hypothetical protein YP_008564432.1 1394777 R 1335916 CDS YP_008564433.1 544390005 16978993 complement(1395156..1396541) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Putrescine importer PuuP 1396541 16978993 LY180_06600 Escherichia coli LY180 Putrescine importer PuuP YP_008564433.1 1395156 R 1335916 CDS YP_008564434.1 544390006 16978994 complement(1396844..1398262) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; gamma-glutamylputrescine synthetase 1398262 16978994 LY180_06605 Escherichia coli LY180 gamma-glutamylputrescine synthetase YP_008564434.1 1396844 R 1335916 CDS YP_008564435.1 544390007 16978995 1398474..1399238 1 NC_022364.1 catalyzes the degradation of gamma-glutamyl-gamma-aminobutyrate into glutamate and gamma-aminobutyrate; Derived by automated computational analysis using gene prediction method: Protein Homology.; gamma-glutamyl-gamma-aminobutyrate hydrolase 1399238 puuD 16978995 puuD Escherichia coli LY180 gamma-glutamyl-gamma-aminobutyrate hydrolase YP_008564435.1 1398474 D 1335916 CDS YP_008564436.1 544390008 16978996 1399265..1399822 1 NC_022364.1 regulates genes involved in putrescine degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.; XRE family transcriptional regulator 1399822 16978996 LY180_06615 Escherichia coli LY180 XRE family transcriptional regulator YP_008564436.1 1399265 D 1335916 CDS YP_008564437.1 544390009 16978997 1400097..1401584 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; aldehyde dehydrogenase 1401584 16978997 LY180_06620 Escherichia coli LY180 aldehyde dehydrogenase YP_008564437.1 1400097 D 1335916 CDS YP_008564438.1 544390010 16978998 1401586..1402866 1 NC_022364.1 catalyzes the formation of gamma-glutamyl-gamma-aminobutyraldehyde from gamma-glutamylputrescine; Derived by automated computational analysis using gene prediction method: Protein Homology.; gamma-glutamylputrescine oxidoreductase 1402866 16978998 LY180_06625 Escherichia coli LY180 gamma-glutamylputrescine oxidoreductase YP_008564438.1 1401586 D 1335916 CDS YP_008564439.1 544390011 16978999 1402904..1404169 1 NC_022364.1 catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 4-aminobutyrate aminotransferase 1404169 16978999 LY180_06630 Escherichia coli LY180 4-aminobutyrate aminotransferase YP_008564439.1 1402904 D 1335916 CDS YP_008564440.1 544390012 16979000 complement(1404289..1405281) 1 NC_022364.1 transcriptional activator for pspABCE which are induced in response to phage proteins, membrane altering stresses, and impaired proton expor; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 1405281 pspF 16979000 pspF Escherichia coli LY180 transcriptional regulator YP_008564440.1 1404289 R 1335916 CDS YP_008564441.1 544390013 16979001 1405433..1406101 1 NC_022364.1 involved in maintaining membrane potential under membrane stress conditions; also acts as a negative transcriptional regulator of the phage shock protein (psp) operon(pspABCDE) by regulating the transcriptional activator PspF; Derived by automated computational analysis using gene prediction method: Protein Homology.; phage-shock protein 1406101 16979001 LY180_06640 Escherichia coli LY180 phage-shock protein YP_008564441.1 1405433 D 1335916 CDS YP_008564442.1 544390014 16979002 1406155..1406379 1 NC_022364.1 DNA-binding transcriptional regulator; acts together with PspC to induce psp operon during infection with phage, exposure to ethanol or osmotic shock; forms a complex with PspA and C; PspC is required for PspAB binding; Derived by automated computational analysis using gene prediction method: Protein Homology.; phage-shock protein 1406379 pspB 16979002 pspB Escherichia coli LY180 phage-shock protein YP_008564442.1 1406155 D 1335916 CDS YP_008564443.1 544390015 16979003 1406379..1406738 1 NC_022364.1 with PsbB forms toxin/antitoxin pair; activates the psp operon in response to phage infection, exposure to ethanol or osmotic shock; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 1406738 16979003 LY180_06650 Escherichia coli LY180 transcriptional regulator YP_008564443.1 1406379 D 1335916 CDS YP_008564444.1 544390016 16979004 1406747..1406968 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phage-shock protein 1406968 16979004 LY180_06655 Escherichia coli LY180 phage-shock protein YP_008564444.1 1406747 D 1335916 CDS YP_008564445.1 544390017 16979005 1407043..1407357 1 NC_022364.1 rhodanese; catalyzes the formation of thiocyanate from thiosulfate and hydrogen cyanide; Derived by automated computational analysis using gene prediction method: Protein Homology.; thiosulfate:cyanide sulfurtransferase 1407357 16979005 LY180_06660 Escherichia coli LY180 thiosulfate:cyanide sulfurtransferase YP_008564445.1 1407043 D 1335916 CDS YP_008564446.1 544392907 16979006 1407570..1409249 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; sucrose phosphorylase 1409249 16979006 LY180_06665 Escherichia coli LY180 sucrose phosphorylase YP_008564446.1 1407570 D 1335916 CDS YP_008564447.1 544392908 16979007 1409263..1410555 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; sugar ABC transporter substrate-binding protein 1410555 16979007 LY180_06670 Escherichia coli LY180 sugar ABC transporter substrate-binding protein YP_008564447.1 1409263 D 1335916 CDS YP_008564448.1 544392909 16979008 1410576..1411457 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; sugar ABC transporter permease 1411457 16979008 LY180_06675 Escherichia coli LY180 sugar ABC transporter permease YP_008564448.1 1410576 D 1335916 CDS YP_008564449.1 544392910 16979009 1411444..1412286 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; sugar ABC transporter permease 1412286 16979009 LY180_06680 Escherichia coli LY180 sugar ABC transporter permease YP_008564449.1 1411444 D 1335916 CDS YP_008564450.1 544392911 16979010 1412317..1413369 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; alcohol dehydrogenase 1413369 16979010 LY180_06685 Escherichia coli LY180 alcohol dehydrogenase YP_008564450.1 1412317 D 1335916 CDS YP_008564451.1 544392912 16979011 1413387..1414175 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1414175 16979011 LY180_06690 Escherichia coli LY180 hypothetical protein YP_008564451.1 1413387 D 1335916 CDS YP_008564452.1 544392913 16979012 1414197..1415240 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; oxidoreductase 1415240 16979012 LY180_06695 Escherichia coli LY180 oxidoreductase YP_008564452.1 1414197 D 1335916 CDS YP_008564453.1 544392914 16979013 1415237..1417504 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; glycosyl hydrolase family 65 1417504 16979013 LY180_06700 Escherichia coli LY180 glycosyl hydrolase family 65 YP_008564453.1 1415237 D 1335916 CDS YP_008564454.1 544392915 16979014 1417501..1418160 1 NC_022364.1 catalyzes the interconversion of beta-D-glucose 6-phosphate to beta-D-glucose 1-phosphate; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; beta-phosphoglucomutase 1418160 16979014 LY180_06705 Escherichia coli LY180 beta-phosphoglucomutase YP_008564454.1 1417501 D 1335916 CDS YP_008564455.1 544390018 16979015 1418174..1419256 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar ABC transporter ATP-binding protein 1419256 16979015 LY180_06710 Escherichia coli LY180 sugar ABC transporter ATP-binding protein YP_008564455.1 1418174 D 1335916 CDS YP_008564456.1 544390019 16979016 1419301..1420206 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1420206 16979016 LY180_06715 Escherichia coli LY180 membrane protein YP_008564456.1 1419301 D 1335916 CDS YP_008564457.1 544390020 16979017 complement(1420317..1421315) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LacI family transcriptional regulator 1421315 16979017 LY180_06720 Escherichia coli LY180 LacI family transcriptional regulator YP_008564457.1 1420317 R 1335916 CDS YP_008564458.1 544390021 16979018 1421470..1422867 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1422867 16979018 LY180_06725 Escherichia coli LY180 hypothetical protein YP_008564458.1 1421470 D 1335916 CDS YP_008564459.1 544390022 16979019 1422864..1423925 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1423925 16979019 LY180_06730 Escherichia coli LY180 membrane protein YP_008564459.1 1422864 D 1335916 CDS YP_008564460.1 544390023 16979020 1424073..1425614 1 NC_022364.1 regulates genes involved in the biosynthesis and transport of aromatic amino acids; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 1425614 16979020 LY180_06735 Escherichia coli LY180 transcriptional regulator YP_008564460.1 1424073 D 1335916 CDS YP_008564461.1 544390024 16979021 complement(1425658..1426164) 1 NC_022364.1 antioxidant activity; thioredoxin-dependent thiol peroxidase; forms homodimers in solution; shows substrate specificity to alkyl hydroperoxides; periplasmic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; lipid hydroperoxide peroxidase 1426164 tpx 16979021 tpx Escherichia coli LY180 lipid hydroperoxide peroxidase YP_008564461.1 1425658 R 1335916 CDS YP_008564462.1 544390025 16979022 1426283..1427248 1 NC_022364.1 catalyzes the epimerization of L-alanyl-D-glutamate to L-alanyl-L-glutamate; Derived by automated computational analysis using gene prediction method: Protein Homology.; L-Ala-D/L-Glu epimerase 1427248 16979022 LY180_06745 Escherichia coli LY180 L-Ala-D/L-Glu epimerase YP_008564462.1 1426283 D 1335916 CDS YP_008564463.1 544390026 16979023 complement(1427223..1427951) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; murein peptide amidase A 1427951 16979023 LY180_06750 Escherichia coli LY180 murein peptide amidase A YP_008564463.1 1427223 R 1335916 CDS YP_008564464.1 544390027 16979024 complement(1428242..1428892) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; NAD-dependent dehydratase 1428892 16979024 LY180_06755 Escherichia coli LY180 NAD-dependent dehydratase YP_008564464.1 1428242 R 1335916 CDS YP_008564465.1 544390028 16979025 complement(1428898..1429665) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; alpha/beta hydrolase 1429665 16979025 LY180_06760 Escherichia coli LY180 alpha/beta hydrolase YP_008564465.1 1428898 R 1335916 CDS YP_008564466.1 544390029 16979026 complement(1429830..1430762) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1430762 16979026 LY180_06765 Escherichia coli LY180 hypothetical protein YP_008564466.1 1429830 R 1335916 CDS YP_008564467.1 544390030 16979027 1430888..1431787 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LysR family transcriptional regulator 1431787 16979027 LY180_06770 Escherichia coli LY180 LysR family transcriptional regulator YP_008564467.1 1430888 D 1335916 CDS YP_008564468.1 544390031 16979028 1432124..1433737 1 NC_022364.1 is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide ABC transporter substrate-binding protein 1433737 16979028 LY180_06775 Escherichia coli LY180 peptide ABC transporter substrate-binding protein YP_008564468.1 1432124 D 1335916 CDS YP_008564469.1 544390032 16979029 complement(1433788..1434819) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; MscS family inner membrane protein YnaI 1434819 16979029 LY180_06780 Escherichia coli LY180 MscS family inner membrane protein YnaI YP_008564469.1 1433788 R 1335916 CDS YP_008564470.1 544390033 16979030 1435063..1435320 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1435320 16979030 LY180_06785 Escherichia coli LY180 hypothetical protein YP_008564470.1 1435063 D 1335916 CDS YP_008564471.1 544390034 16979031 complement(1435370..1436320) 1 NC_022364.1 with UspC and UspD is involved in resistance to UV irradiation; Derived by automated computational analysis using gene prediction method: Protein Homology.; universal stress protein E 1436320 16979031 LY180_06790 Escherichia coli LY180 universal stress protein E YP_008564471.1 1435370 R 1335916 CDS YP_008564472.1 544390035 16979032 complement(1436472..1437224) 1 NC_022364.1 Global transcription factor that controls the expression of over 100 target genes in response to anoxia; Derived by automated computational analysis using gene prediction method: Protein Homology.; fumarate/nitrate reduction transcriptional regulator 1437224 16979032 LY180_06795 Escherichia coli LY180 fumarate/nitrate reduction transcriptional regulator YP_008564472.1 1436472 R 1335916 CDS YP_008564473.1 544390036 16979033 complement(1437419..1437934) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; O-6-alkylguanine-DNA:cysteine-protein methyltransferase 1437934 16979033 LY180_06800 Escherichia coli LY180 O-6-alkylguanine-DNA:cysteine-protein methyltransferase YP_008564473.1 1437419 R 1335916 CDS YP_008564474.1 544392916 16979034 complement(1437945..1439471) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1439471 16979034 LY180_06805 Escherichia coli LY180 hypothetical protein YP_008564474.1 1437945 R 1335916 CDS YP_008564475.1 544390037 16979035 complement(1439508..1440953) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidase M20 1440953 16979035 LY180_06810 Escherichia coli LY180 peptidase M20 YP_008564475.1 1439508 R 1335916 CDS YP_008564476.1 544390038 16979036 complement(1440953..1442263) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidase M20 1442263 16979036 LY180_06815 Escherichia coli LY180 peptidase M20 YP_008564476.1 1440953 R 1335916 CDS YP_008564477.1 544392917 16979037 complement(1442339..1442440) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1442440 16979037 LY180_06820 Escherichia coli LY180 hypothetical protein YP_008564477.1 1442339 R 1335916 CDS YP_008564478.1 544390039 16979038 1442439..1443347 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LysR family transcriptional regulator 1443347 16979038 LY180_06825 Escherichia coli LY180 LysR family transcriptional regulator YP_008564478.1 1442439 D 1335916 CDS YP_008564479.1 544390040 16979039 1443677..1444240 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA endonuclease SmrA 1444240 16979039 LY180_06830 Escherichia coli LY180 DNA endonuclease SmrA YP_008564479.1 1443677 D 1335916 CDS YP_008564480.1 544392918 16979040 complement(1444261..1445493) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; diguanylate cyclase 1445493 16979040 LY180_06835 Escherichia coli LY180 diguanylate cyclase YP_008564480.1 1444261 R 1335916 CDS YP_008564481.1 544390041 16979041 1445748..1446731 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; zinc transporter 1446731 zntB 16979041 zntB Escherichia coli LY180 zinc transporter YP_008564481.1 1445748 D 1335916 CDS YP_008564482.1 544390042 16979042 1447209..1448582 1 NC_022364.1 exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; RNA helicase 1448582 16979042 LY180_06845 Escherichia coli LY180 RNA helicase YP_008564482.1 1447209 D 1335916 CDS YP_008564483.1 544392919 16979043 complement(1448711..1449646) 1 NC_022364.1 TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs; forms 2-thiocytidine (s(2)C); Derived by automated computational analysis using gene prediction method: GeneMarkS+.; tRNA 2-thiocytidine biosynthesis protein TtcA 1449646 16979043 LY180_06850 Escherichia coli LY180 tRNA 2-thiocytidine biosynthesis protein TtcA YP_008564483.1 1448711 R 1335916 CDS YP_008564484.1 544390043 16979044 complement(1449698..1450933) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; integrase 1450933 16979044 LY180_06855 Escherichia coli LY180 integrase YP_008564484.1 1449698 R 1335916 CDS YP_008564485.1 544392920 16979045 complement(1450935..1451150) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1451150 16979045 LY180_06860 Escherichia coli LY180 hypothetical protein YP_008564485.1 1450935 R 1335916 CDS YP_008564486.1 544392921 16979046 complement(1451229..1451510) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; gydaC 1451510 16979046 LY180_06865 Escherichia coli LY180 gydaC YP_008564486.1 1451229 R 1335916 CDS YP_008564487.1 544390044 16979048 complement(1452484..1455084) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; exodeoxyribonuclease VIII 1455084 16979048 LY180_06875 Escherichia coli LY180 exodeoxyribonuclease VIII YP_008564487.1 1452484 R 1335916 CDS YP_008564488.1 544392922 16979049 complement(1455186..1455461) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1455461 16979049 LY180_06880 Escherichia coli LY180 hypothetical protein YP_008564488.1 1455186 R 1335916 CDS YP_008564489.1 544392923 16979050 complement(1455536..1455712) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1455712 16979050 LY180_06885 Escherichia coli LY180 hypothetical protein YP_008564489.1 1455536 R 1335916 CDS YP_008564490.1 544390045 16979051 complement(1455706..1455927) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division protein FtsZ 1455927 16979051 LY180_06890 Escherichia coli LY180 cell division protein FtsZ YP_008564490.1 1455706 R 1335916 CDS YP_008564491.1 544392924 16979052 1456142..1456351 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1456351 16979052 LY180_06895 Escherichia coli LY180 hypothetical protein YP_008564491.1 1456142 D 1335916 CDS YP_008564492.1 544390046 16979053 complement(1456348..1456500) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1456500 16979053 LY180_06900 Escherichia coli LY180 hypothetical protein YP_008564492.1 1456348 R 1335916 CDS YP_008564493.1 544392925 16979054 complement(1456511..1456645) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1456645 16979054 LY180_06905 Escherichia coli LY180 hypothetical protein YP_008564493.1 1456511 R 1335916 CDS YP_008564494.1 544392926 16979055 complement(1456931..1457350) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; XRE family transcriptional regulator 1457350 16979055 LY180_06910 Escherichia coli LY180 XRE family transcriptional regulator YP_008564494.1 1456931 R 1335916 CDS YP_008564495.1 544390047 16979056 1457430..1457684 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Cro/Cl family transcriptional regulator 1457684 16979056 LY180_06915 Escherichia coli LY180 Cro/Cl family transcriptional regulator YP_008564495.1 1457430 D 1335916 CDS YP_008564496.1 544392927 16979057 1457681..1458103 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1458103 16979057 LY180_06920 Escherichia coli LY180 hypothetical protein YP_008564496.1 1457681 D 1335916 CDS YP_008564497.1 544392928 16979058 1458116..1458973 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1458973 16979058 LY180_06925 Escherichia coli LY180 hypothetical protein YP_008564497.1 1458116 D 1335916 CDS YP_008564498.1 544390048 16979059 1458980..1459726 1 NC_022364.1 acts to load the DnaB helicase onto the initiation site during DNA replication; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA replication protein DnaC 1459726 16979059 LY180_06930 Escherichia coli LY180 DNA replication protein DnaC YP_008564498.1 1458980 D 1335916 CDS YP_008564499.1 544392929 16979060 1459749..1460510 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1460510 16979060 LY180_06935 Escherichia coli LY180 hypothetical protein YP_008564499.1 1459749 D 1335916 CDS YP_008564500.1 544392930 16979061 1460526..1460948 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1460948 16979061 LY180_06940 Escherichia coli LY180 hypothetical protein YP_008564500.1 1460526 D 1335916 CDS YP_008564501.1 544392931 16979062 1461132..1462259 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1462259 16979062 LY180_06945 Escherichia coli LY180 hypothetical protein YP_008564501.1 1461132 D 1335916 CDS YP_008564502.1 544392932 16979063 1462252..1463361 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; ATP-dependent endonuclease 1463361 16979063 LY180_06950 Escherichia coli LY180 ATP-dependent endonuclease YP_008564502.1 1462252 D 1335916 CDS YP_008564503.1 544392933 16979064 1463358..1464335 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1464335 16979064 LY180_06955 Escherichia coli LY180 hypothetical protein YP_008564503.1 1463358 D 1335916 CDS YP_008564504.1 544390049 16979065 1464939..1465121 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; regulatory protein 1465121 16979065 LY180_06960 Escherichia coli LY180 regulatory protein YP_008564504.1 1464939 D 1335916 CDS YP_008564505.1 544392934 16979066 1465590..1466189 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1466189 16979066 LY180_06965 Escherichia coli LY180 hypothetical protein YP_008564505.1 1465590 D 1335916 CDS YP_008564506.1 544390050 16979067 1466189..1466479 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1466479 16979067 LY180_06970 Escherichia coli LY180 hypothetical protein YP_008564506.1 1466189 D 1335916 CDS YP_008564507.1 544392935 16979068 1466476..1467012 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1467012 16979068 LY180_06975 Escherichia coli LY180 hypothetical protein YP_008564507.1 1466476 D 1335916 CDS YP_008564508.1 544392936 16979071 1468695..1468940 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; holin 1468940 16979071 LY180_06990 Escherichia coli LY180 holin YP_008564508.1 1468695 D 1335916 CDS YP_008564509.1 544390051 16979072 1468943..1469320 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidase M15 1469320 16979072 LY180_06995 Escherichia coli LY180 peptidase M15 YP_008564509.1 1468943 D 1335916 CDS YP_008564510.1 544392937 16979073 1469362..1469517 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1469517 16979073 LY180_07000 Escherichia coli LY180 hypothetical protein YP_008564510.1 1469362 D 1335916 CDS YP_008564511.1 544392938 16979074 1469691..1469798 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1469798 16979074 LY180_07005 Escherichia coli LY180 hypothetical protein YP_008564511.1 1469691 D 1335916 CDS YP_008564512.1 544392939 16979075 1469922..1470710 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transcriptional regulator 1470710 16979075 LY180_07010 Escherichia coli LY180 transcriptional regulator YP_008564512.1 1469922 D 1335916 CDS YP_008564513.1 544392940 16979076 1470703..1471635 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1471635 16979076 LY180_07015 Escherichia coli LY180 hypothetical protein YP_008564513.1 1470703 D 1335916 CDS YP_008564514.1 544392941 16979077 1471613..1471822 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1471822 16979077 LY180_07020 Escherichia coli LY180 hypothetical protein YP_008564514.1 1471613 D 1335916 CDS YP_008564515.1 544392942 16979078 1471826..1472917 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; terminase small subunit 1472917 16979078 LY180_07025 Escherichia coli LY180 terminase small subunit YP_008564515.1 1471826 D 1335916 CDS YP_008564516.1 544392943 16979079 1472907..1474235 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; terminase 1474235 16979079 LY180_07030 Escherichia coli LY180 terminase YP_008564516.1 1472907 D 1335916 CDS YP_008564517.1 544392944 16979080 1474254..1475690 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1475690 16979080 LY180_07035 Escherichia coli LY180 hypothetical protein YP_008564517.1 1474254 D 1335916 CDS YP_008564518.1 544392945 16979081 1475635..1476468 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1476468 16979081 LY180_07040 Escherichia coli LY180 hypothetical protein YP_008564518.1 1475635 D 1335916 CDS YP_008564519.1 544392946 16979082 1476449..1477771 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; NUDIX hydrolase 1477771 16979082 LY180_07045 Escherichia coli LY180 NUDIX hydrolase YP_008564519.1 1476449 D 1335916 CDS YP_008564520.1 544392947 16979083 1477764..1478381 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1478381 16979083 LY180_07050 Escherichia coli LY180 hypothetical protein YP_008564520.1 1477764 D 1335916 CDS YP_008564521.1 544392948 16979084 1478396..1479424 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1479424 16979084 LY180_07055 Escherichia coli LY180 hypothetical protein YP_008564521.1 1478396 D 1335916 CDS YP_008564522.1 544392949 16979085 1479482..1479952 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1479952 16979085 LY180_07060 Escherichia coli LY180 hypothetical protein YP_008564522.1 1479482 D 1335916 CDS YP_008564523.1 544392950 16979086 1479952..1480392 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1480392 16979086 LY180_07065 Escherichia coli LY180 hypothetical protein YP_008564523.1 1479952 D 1335916 CDS YP_008564524.1 544392951 16979087 1480389..1480829 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1480829 16979087 LY180_07070 Escherichia coli LY180 hypothetical protein YP_008564524.1 1480389 D 1335916 CDS YP_008564525.1 544392952 16979088 1480816..1481760 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1481760 16979088 LY180_07075 Escherichia coli LY180 hypothetical protein YP_008564525.1 1480816 D 1335916 CDS YP_008564526.1 544392953 16979089 1481760..1483097 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1483097 16979089 LY180_07080 Escherichia coli LY180 hypothetical protein YP_008564526.1 1481760 D 1335916 CDS YP_008564527.1 544392954 16979090 1483121..1483552 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1483552 16979090 LY180_07085 Escherichia coli LY180 hypothetical protein YP_008564527.1 1483121 D 1335916 CDS YP_008564528.1 544392955 16979091 1483549..1484166 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1484166 16979091 LY180_07090 Escherichia coli LY180 hypothetical protein YP_008564528.1 1483549 D 1335916 CDS YP_008564529.1 544392956 16979092 1484245..1486218 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; lytic transglycosylase 1486218 16979092 LY180_07095 Escherichia coli LY180 lytic transglycosylase YP_008564529.1 1484245 D 1335916 CDS YP_008564530.1 544392957 16979093 1486222..1486890 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1486890 16979093 LY180_07100 Escherichia coli LY180 hypothetical protein YP_008564530.1 1486222 D 1335916 CDS YP_008564531.1 544392958 16979094 1486887..1487153 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1487153 16979094 LY180_07105 Escherichia coli LY180 hypothetical protein YP_008564531.1 1486887 D 1335916 CDS YP_008564532.1 544392959 16979095 1487153..1488160 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1488160 16979095 LY180_07110 Escherichia coli LY180 hypothetical protein YP_008564532.1 1487153 D 1335916 CDS YP_008564533.1 544392960 16979096 1488160..1488873 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; phage baseplate protein 1488873 16979096 LY180_07115 Escherichia coli LY180 phage baseplate protein YP_008564533.1 1488160 D 1335916 CDS YP_008564534.1 544392961 16979097 1488983..1489180 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1489180 16979097 LY180_07120 Escherichia coli LY180 hypothetical protein YP_008564534.1 1488983 D 1335916 CDS YP_008564535.1 544392962 16979098 1489416..1489562 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1489562 16979098 LY180_07125 Escherichia coli LY180 hypothetical protein YP_008564535.1 1489416 D 1335916 CDS YP_008564536.1 544392963 16979099 1489570..1489917 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1489917 16979099 LY180_07130 Escherichia coli LY180 hypothetical protein YP_008564536.1 1489570 D 1335916 CDS YP_008564537.1 544392964 16979100 1490055..1490282 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1490282 16979100 LY180_07135 Escherichia coli LY180 hypothetical protein YP_008564537.1 1490055 D 1335916 CDS YP_008564538.1 544392965 16979101 complement(1490308..1490847) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1490847 16979101 LY180_07140 Escherichia coli LY180 hypothetical protein YP_008564538.1 1490308 R 1335916 CDS YP_008564539.1 544392966 16979102 1490890..1492095 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1492095 16979102 LY180_07145 Escherichia coli LY180 hypothetical protein YP_008564539.1 1490890 D 1335916 CDS YP_008564540.1 544392967 16979103 1492079..1492705 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1492705 16979103 LY180_07150 Escherichia coli LY180 hypothetical protein YP_008564540.1 1492079 D 1335916 CDS YP_008564541.1 544390052 16979104 1492702..1494255 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 1494255 16979104 LY180_07155 Escherichia coli LY180 tail protein YP_008564541.1 1492702 D 1335916 CDS YP_008564542.1 544390053 16979105 1494258..1494803 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail assembly protein 1494803 16979105 LY180_07160 Escherichia coli LY180 tail assembly protein YP_008564542.1 1494258 D 1335916 CDS YP_008564543.1 544392968 16979106 1494827..1497967 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; shikimate transporter 1497967 16979106 LY180_07165 Escherichia coli LY180 shikimate transporter YP_008564543.1 1494827 D 1335916 CDS YP_008564544.1 544390054 16979107 1497982..1498554 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1498554 16979107 LY180_07170 Escherichia coli LY180 hypothetical protein YP_008564544.1 1497982 D 1335916 CDS YP_008564545.1 544390055 16979108 complement(1499094..1499528) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; universal stress protein F 1499528 16979108 LY180_07175 Escherichia coli LY180 universal stress protein F YP_008564545.1 1499094 R 1335916 CDS YP_008564546.1 544390056 16979109 complement(1499669..1500802) 1 NC_022364.1 allows for ions and hydrophilic solutes to cross the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; outer membrane porin protein C 1500802 16979109 LY180_07180 Escherichia coli LY180 outer membrane porin protein C YP_008564546.1 1499669 R 1335916 CDS YP_008564547.1 544390057 16979110 complement(1501169..1504693) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; pyruvate-flavodoxin oxidoreductase 1504693 16979110 LY180_07185 Escherichia coli LY180 pyruvate-flavodoxin oxidoreductase YP_008564547.1 1501169 R 1335916 CDS YP_008564548.1 544390058 16979111 1504967..1505233 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1505233 16979111 LY180_07190 Escherichia coli LY180 hypothetical protein YP_008564548.1 1504967 D 1335916 CDS YP_008564549.1 544390059 16979112 complement(1505230..1505652) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; heat-inducible protein 1505652 16979112 LY180_07195 Escherichia coli LY180 heat-inducible protein YP_008564549.1 1505230 R 1335916 CDS YP_008564550.1 544392969 16979113 complement(1505763..1505984) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1505984 16979113 LY180_07200 Escherichia coli LY180 hypothetical protein YP_008564550.1 1505763 R 1335916 CDS YP_008564551.1 544390060 16979114 complement(1506136..1507530) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 6-phospho-beta-glucosidase 1507530 16979114 LY180_07205 Escherichia coli LY180 6-phospho-beta-glucosidase YP_008564551.1 1506136 R 1335916 CDS YP_008564552.1 544390061 16979115 complement(1507548..1509407) 1 NC_022364.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS glucose transporter subunit IIA 1509407 16979115 LY180_07210 Escherichia coli LY180 PTS glucose transporter subunit IIA YP_008564552.1 1507548 R 1335916 CDS YP_008564553.1 544392970 16979116 complement(1509947..1510264) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1510264 16979116 LY180_07215 Escherichia coli LY180 hypothetical protein YP_008564553.1 1509947 R 1335916 CDS YP_008564554.1 544392971 16979117 complement(1510418..1510840) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1510840 16979117 LY180_07220 Escherichia coli LY180 hypothetical protein YP_008564554.1 1510418 R 1335916 CDS YP_008564555.1 544390062 16979118 1511048..1513687 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1513687 16979118 LY180_07225 Escherichia coli LY180 hypothetical protein YP_008564555.1 1511048 D 1335916 CDS YP_008564556.1 544390063 16979119 1513684..1513869 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1513869 16979119 LY180_07230 Escherichia coli LY180 hypothetical protein YP_008564556.1 1513684 D 1335916 CDS YP_008564557.1 544390064 16979120 1513877..1514203 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1514203 16979120 LY180_07235 Escherichia coli LY180 hypothetical protein YP_008564557.1 1513877 D 1335916 CDS YP_008564558.1 544390065 16979121 complement(1514375..1515280) 1 NC_022364.1 activator of genes involved in phenylacetic acid catabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.; AraC family transcriptional regulator 1515280 16979121 LY180_07240 Escherichia coli LY180 AraC family transcriptional regulator YP_008564558.1 1514375 R 1335916 CDS YP_008564559.1 544390066 16979122 1515516..1517015 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; aldehyde dehydrogenase 1517015 16979122 LY180_07245 Escherichia coli LY180 aldehyde dehydrogenase YP_008564559.1 1515516 D 1335916 CDS YP_008564560.1 544390067 16979123 complement(1517073..1519346) 1 NC_022364.1 catalyzes the formation of phenylacetaldehyde from 2-phenylethylamine; Derived by automated computational analysis using gene prediction method: Protein Homology.; tyramine oxidase 1519346 tynA 16979123 tynA Escherichia coli LY180 tyramine oxidase YP_008564560.1 1517073 R 1335916 CDS YP_008564561.1 544390068 16979124 complement(1519594..1521639) 1 NC_022364.1 catalyzes the ring cleavage reaction in phenylacetate degradation and the formation of 3-hydroxyacyl-CoA from crotonyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.; enoyl-CoA hydratase 1521639 16979124 LY180_07255 Escherichia coli LY180 enoyl-CoA hydratase YP_008564561.1 1519594 R 1335916 CDS YP_008564562.1 544392972 16979125 1521924..1522853 1 NC_022364.1 with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; phenylacetate-CoA oxygenase subunit PaaA 1522853 paaA 16979125 paaA Escherichia coli LY180 phenylacetate-CoA oxygenase subunit PaaA YP_008564562.1 1521924 D 1335916 CDS YP_008564563.1 544390069 16979126 1522865..1523152 1 NC_022364.1 with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.; phenylacetate-CoA oxygenase subunit PaaB 1523152 paaB 16979126 paaB Escherichia coli LY180 phenylacetate-CoA oxygenase subunit PaaB YP_008564563.1 1522865 D 1335916 CDS YP_008564564.1 544390070 16979127 1523161..1523907 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phenylacetic acid degradation protein 1523907 16979127 LY180_07270 Escherichia coli LY180 phenylacetic acid degradation protein YP_008564564.1 1523161 D 1335916 CDS YP_008564565.1 544390071 16979128 1523922..1524419 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phenylacetic acid degradation protein 1524419 16979128 LY180_07275 Escherichia coli LY180 phenylacetic acid degradation protein YP_008564565.1 1523922 D 1335916 CDS YP_008564566.1 544390072 16979129 1524427..1525497 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phenylacetic acid degradation protein 1525497 16979129 LY180_07280 Escherichia coli LY180 phenylacetic acid degradation protein YP_008564566.1 1524427 D 1335916 CDS YP_008564567.1 544390073 16979130 1525494..1526261 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 2,3-dehydroadipyl-CoA hydratase 1526261 16979130 LY180_07285 Escherichia coli LY180 2,3-dehydroadipyl-CoA hydratase YP_008564567.1 1525494 D 1335916 CDS YP_008564568.1 544390074 16979131 1526261..1527049 1 NC_022364.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.; enoyl-CoA hydratase 1527049 16979131 LY180_07290 Escherichia coli LY180 enoyl-CoA hydratase YP_008564568.1 1526261 D 1335916 CDS YP_008564569.1 544390075 16979132 1527051..1528478 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-hydroxyacyl-CoA dehydrogenase 1528478 16979132 LY180_07295 Escherichia coli LY180 3-hydroxyacyl-CoA dehydrogenase YP_008564569.1 1527051 D 1335916 CDS YP_008564570.1 544390076 16979133 1528468..1528890 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acyl-CoA thioesterase 1528890 16979133 LY180_07300 Escherichia coli LY180 acyl-CoA thioesterase YP_008564570.1 1528468 D 1335916 CDS YP_008564571.1 544390077 16979134 1528890..1530095 1 NC_022364.1 FadA; fatty acid oxidation complex component beta; functions in a heterotetramer with FadB; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-ketoacyl-CoA thiolase 1530095 fadA 16979134 fadA Escherichia coli LY180 3-ketoacyl-CoA thiolase YP_008564571.1 1528890 D 1335916 CDS YP_008564572.1 544390078 16979135 1530122..1531435 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phenylacetate-CoA ligase 1531435 16979135 LY180_07310 Escherichia coli LY180 phenylacetate-CoA ligase YP_008564572.1 1530122 D 1335916 CDS YP_008564573.1 544390079 16979136 1531536..1532486 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phenylacetic acid degradation protein 1532486 16979136 LY180_07315 Escherichia coli LY180 phenylacetic acid degradation protein YP_008564573.1 1531536 D 1335916 CDS YP_008564574.1 544390080 16979137 1532468..1533058 1 NC_022364.1 involved in the synthesis of a cofactor required for carnitine dehydratase and carnitine racemase activities; Derived by automated computational analysis using gene prediction method: Protein Homology.; carnitine operon protein CaiE 1533058 16979137 LY180_07320 Escherichia coli LY180 carnitine operon protein CaiE YP_008564574.1 1532468 D 1335916 CDS YP_008564575.1 544390081 16979138 1533289..1534149 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase 1534149 16979138 LY180_07325 Escherichia coli LY180 oxidoreductase YP_008564575.1 1533289 D 1335916 CDS YP_008564576.1 544390082 16979139 1534213..1536519 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1536519 16979139 LY180_07330 Escherichia coli LY180 hypothetical protein YP_008564576.1 1534213 D 1335916 CDS YP_008564577.1 544390083 16979140 1536690..1537295 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1537295 16979140 LY180_07335 Escherichia coli LY180 membrane protein YP_008564577.1 1536690 D 1335916 CDS YP_008564578.1 544390084 16979141 1537295..1538191 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1538191 16979141 LY180_07340 Escherichia coli LY180 hypothetical protein YP_008564578.1 1537295 D 1335916 CDS YP_008564579.1 544390085 16979142 1538207..1539964 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1539964 16979142 LY180_07345 Escherichia coli LY180 hypothetical protein YP_008564579.1 1538207 D 1335916 CDS YP_008564580.1 544390086 16979143 1539954..1541270 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1541270 16979143 LY180_07350 Escherichia coli LY180 hypothetical protein YP_008564580.1 1539954 D 1335916 CDS YP_008564581.1 544390087 16979144 complement(1541321..1541926) 1 NC_022364.1 FMN-dependent; requires NADH; catalyzes the cleavage of azo bond in aromatic azo compounds; Derived by automated computational analysis using gene prediction method: Protein Homology.; azoreductase 1541926 16979144 LY180_07355 Escherichia coli LY180 azoreductase YP_008564581.1 1541321 R 1335916 CDS YP_008564582.1 544390088 16979145 1542127..1546029 1 NC_022364.1 involved in the post-transcriptional processing of the daa operon mRNA, which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain; Derived by automated computational analysis using gene prediction method: Protein Homology.; RNA helicase 1546029 16979145 LY180_07360 Escherichia coli LY180 RNA helicase YP_008564582.1 1542127 D 1335916 CDS YP_008564583.1 544390089 16979146 1546301..1547101 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1547101 16979146 LY180_07365 Escherichia coli LY180 hypothetical protein YP_008564583.1 1546301 D 1335916 CDS YP_008564584.1 544390090 16979147 1547298..1548737 1 NC_022364.1 NAD-linked; Derived by automated computational analysis using gene prediction method: Protein Homology.; aldehyde dehydrogenase 1548737 16979147 LY180_07370 Escherichia coli LY180 aldehyde dehydrogenase YP_008564584.1 1547298 D 1335916 CDS YP_008564585.1 544390091 16979148 complement(1548779..1549780) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glyceraldehyde-3-phosphate dehydrogenase 1549780 16979148 LY180_07375 Escherichia coli LY180 glyceraldehyde-3-phosphate dehydrogenase YP_008564585.1 1548779 R 1335916 CDS YP_008564586.1 544390092 16979149 1549969..1550499 1 NC_022364.1 B-type di-heme cytochrome with a major alpha-absorption peak at 561 nm and a minor peak at 555 nm; Derived by automated computational analysis using gene prediction method: Protein Homology.; cytochrome B561 1550499 16979149 LY180_07380 Escherichia coli LY180 cytochrome B561 YP_008564586.1 1549969 D 1335916 CDS YP_008564587.1 544390093 16979150 1550744..1550917 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1550917 16979150 LY180_07385 Escherichia coli LY180 hypothetical protein YP_008564587.1 1550744 D 1335916 CDS YP_008564588.1 544390094 16979151 complement(1550989..1551138) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; protein hokC 1551138 16979151 LY180_07390 Escherichia coli LY180 protein hokC YP_008564588.1 1550989 R 1335916 CDS YP_008564589.1 544390095 16979152 1551537..1553177 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; methyl-accepting chemotaxis protein 1553177 16979152 LY180_07395 Escherichia coli LY180 methyl-accepting chemotaxis protein YP_008564589.1 1551537 D 1335916 CDS YP_008564590.1 544390096 16979153 complement(1553215..1554138) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LysR family transcripitonal regulator 1554138 16979153 LY180_07400 Escherichia coli LY180 LysR family transcripitonal regulator YP_008564590.1 1553215 R 1335916 CDS YP_008564591.1 544390097 16979154 1554355..1555698 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1555698 16979154 LY180_07405 Escherichia coli LY180 hypothetical protein YP_008564591.1 1554355 D 1335916 CDS YP_008564592.1 544390098 16979155 1555923..1557578 1 NC_022364.1 involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans; Derived by automated computational analysis using gene prediction method: Protein Homology.; glucan biosynthesis protein D 1557578 mdoD 16979155 mdoD Escherichia coli LY180 glucan biosynthesis protein D YP_008564592.1 1555923 D 1335916 CDS YP_008564593.1 544390099 16979156 1557718..1557942 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1557942 16979156 LY180_07415 Escherichia coli LY180 hypothetical protein YP_008564593.1 1557718 D 1335916 CDS YP_008564594.1 544390100 16979157 1558005..1558541 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ribosomal-protein-L7/L12-serine acetyltransferase 1558541 16979157 LY180_07420 Escherichia coli LY180 ribosomal-protein-L7/L12-serine acetyltransferase YP_008564594.1 1558005 D 1335916 CDS YP_008564595.1 544390101 16979158 complement(1558536..1559516) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acetyltransferase 1559516 16979158 LY180_07425 Escherichia coli LY180 acetyltransferase YP_008564595.1 1558536 R 1335916 CDS YP_008564596.1 544390102 16979159 1559640..1560632 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tellurite resistance protein TehA 1560632 16979159 LY180_07430 Escherichia coli LY180 tellurite resistance protein TehA YP_008564596.1 1559640 D 1335916 CDS YP_008564597.1 544390103 16979160 1560629..1561222 1 NC_022364.1 with TehA confers resistance to tellurite; Derived by automated computational analysis using gene prediction method: Protein Homology.; tellurite resistance protein TehB 1561222 16979160 LY180_07435 Escherichia coli LY180 tellurite resistance protein TehB YP_008564597.1 1560629 D 1335916 CDS YP_008564598.1 544390104 16979161 1561525..1562193 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1562193 16979161 LY180_07440 Escherichia coli LY180 hypothetical protein YP_008564598.1 1561525 D 1335916 CDS YP_008564599.1 544390105 16979162 1562720..1563928 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transposase IS609 1563928 16979162 LY180_07445 Escherichia coli LY180 transposase IS609 YP_008564599.1 1562720 D 1335916 CDS YP_008564600.1 544390106 16979163 complement(1563968..1565143) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1565143 16979163 LY180_07450 Escherichia coli LY180 membrane protein YP_008564600.1 1563968 R 1335916 CDS YP_008564601.1 544390107 16979164 1565235..1565771 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; XRE family transcriptional regulator 1565771 16979164 LY180_07455 Escherichia coli LY180 XRE family transcriptional regulator YP_008564601.1 1565235 D 1335916 CDS YP_008564602.1 544390108 16979165 1565844..1567805 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; protease 1567805 16979165 LY180_07460 Escherichia coli LY180 protease YP_008564602.1 1565844 D 1335916 CDS YP_008564603.1 544390109 16979166 complement(1567897..1568127) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1568127 16979166 LY180_07465 Escherichia coli LY180 hypothetical protein YP_008564603.1 1567897 R 1335916 CDS YP_008564604.1 544390110 16979167 1568550..1568987 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; antitoxin 1568987 16979167 LY180_07470 Escherichia coli LY180 antitoxin YP_008564604.1 1568550 D 1335916 CDS YP_008564605.1 544390111 16979168 1569066..1570472 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; GntR family transcriptional regulator 1570472 16979168 LY180_07475 Escherichia coli LY180 GntR family transcriptional regulator YP_008564605.1 1569066 D 1335916 CDS YP_008564606.1 544390112 16979169 1570717..1571862 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; spermidine/putrescine ABC transporter substrate-binding protein 1571862 16979169 LY180_07480 Escherichia coli LY180 spermidine/putrescine ABC transporter substrate-binding protein YP_008564606.1 1570717 D 1335916 CDS YP_008564607.1 544390113 16979170 1571880..1572893 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; polyamine ABC transporter ATP-binding protein 1572893 16979170 LY180_07485 Escherichia coli LY180 polyamine ABC transporter ATP-binding protein YP_008564607.1 1571880 D 1335916 CDS YP_008564608.1 544390114 16979171 1572894..1573835 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; spermidine/putrescine ABC transporter permease 1573835 16979171 LY180_07490 Escherichia coli LY180 spermidine/putrescine ABC transporter permease YP_008564608.1 1572894 D 1335916 CDS YP_008564609.1 544390115 16979172 1573825..1574619 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; spermidine/putrescine ABC transporter permease 1574619 16979172 LY180_07495 Escherichia coli LY180 spermidine/putrescine ABC transporter permease YP_008564609.1 1573825 D 1335916 CDS YP_008564610.1 544390116 16979173 1574641..1576065 1 NC_022364.1 catalyzes the formation of 4-aminobutanoate from 4-aminobutanal; involved in putrescine degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.; gamma-aminobutyraldehyde dehydrogenase 1576065 16979173 LY180_07500 Escherichia coli LY180 gamma-aminobutyraldehyde dehydrogenase YP_008564610.1 1574641 D 1335916 CDS YP_008564611.1 544390117 16979174 1576377..1576625 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1576625 16979174 LY180_07505 Escherichia coli LY180 hypothetical protein YP_008564611.1 1576377 D 1335916 CDS YP_008564612.1 544390118 16979175 1576711..1576944 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1576944 16979175 LY180_07510 Escherichia coli LY180 hypothetical protein YP_008564612.1 1576711 D 1335916 CDS YP_008564613.1 544390119 16979176 complement(1576945..1577394) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1577394 16979176 LY180_07515 Escherichia coli LY180 membrane protein YP_008564613.1 1576945 R 1335916 CDS YP_008564614.1 544390120 16979177 complement(1577391..1577909) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; N-acetyltransferase 1577909 16979177 LY180_07520 Escherichia coli LY180 N-acetyltransferase YP_008564614.1 1577391 R 1335916 CDS YP_008564615.1 544390121 16979178 1578090..1579127 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; NADP-dependent oxidoreductase 1579127 16979178 LY180_07525 Escherichia coli LY180 NADP-dependent oxidoreductase YP_008564615.1 1578090 D 1335916 CDS YP_008564616.1 544390122 16979179 1579325..1579990 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 1579990 16979179 LY180_07530 Escherichia coli LY180 transcriptional regulator YP_008564616.1 1579325 D 1335916 CDS YP_008564617.1 544390123 16979180 complement(1580026..1582128) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; TonB-dependent receptor 1582128 16979180 LY180_07535 Escherichia coli LY180 TonB-dependent receptor YP_008564617.1 1580026 R 1335916 CDS YP_008564618.1 544390124 16979181 1582370..1583431 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1583431 16979181 LY180_07540 Escherichia coli LY180 hypothetical protein YP_008564618.1 1582370 D 1335916 CDS YP_008564619.1 544390125 16979182 complement(1583546..1585045) 1 NC_022364.1 involved in the transporte of L-asparagine; Derived by automated computational analysis using gene prediction method: Protein Homology.; L-asparagine permease 1585045 16979182 LY180_07545 Escherichia coli LY180 L-asparagine permease YP_008564619.1 1583546 R 1335916 CDS YP_008564620.1 544390126 16979183 1585311..1585928 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1585928 16979183 LY180_07550 Escherichia coli LY180 hypothetical protein YP_008564620.1 1585311 D 1335916 CDS YP_008564621.1 544390127 16979184 1586004..1586216 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1586216 16979184 LY180_07555 Escherichia coli LY180 hypothetical protein YP_008564621.1 1586004 D 1335916 CDS YP_008564622.1 544390128 16979185 1587033..1589141 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; type IV secretion protein Rhs 1589141 16979185 LY180_07560 Escherichia coli LY180 type IV secretion protein Rhs YP_008564622.1 1587033 D 1335916 CDS YP_008564623.1 544392973 16979186 1589209..1593417 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1593417 16979186 LY180_07565 Escherichia coli LY180 hypothetical protein YP_008564623.1 1589209 D 1335916 CDS YP_008564624.1 544392974 16979187 1593429..1593824 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; type IV secretion protein Rhs 1593824 16979187 LY180_07570 Escherichia coli LY180 type IV secretion protein Rhs YP_008564624.1 1593429 D 1335916 CDS YP_008564625.1 544390129 16979188 1594332..1595240 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1595240 16979188 LY180_07575 Escherichia coli LY180 hypothetical protein YP_008564625.1 1594332 D 1335916 CDS YP_008564626.1 544390130 16979189 1595339..1595566 1 NC_022364.1 4-OT; member of subfamily 5; forms a dimer; the function in the Escherichia coli cell is unknown; Derived by automated computational analysis using gene prediction method: Protein Homology.; 4-oxalocrotonate tautomerase 1595566 16979189 LY180_07580 Escherichia coli LY180 4-oxalocrotonate tautomerase YP_008564626.1 1595339 D 1335916 CDS YP_008564627.1 544390131 16979190 complement(1595570..1596139) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1596139 16979190 LY180_07585 Escherichia coli LY180 hypothetical protein YP_008564627.1 1595570 R 1335916 CDS YP_008564628.1 544390132 16979191 1596312..1597157 1 NC_022364.1 catalyzes the addition of the acetyl moity of acetyl-CoA to an N-hydroxy-arylamine to form an N-acetoxyarylamine; Derived by automated computational analysis using gene prediction method: Protein Homology.; N-hydroxyarylamine O-acetyltransferase 1597157 16979191 LY180_07590 Escherichia coli LY180 N-hydroxyarylamine O-acetyltransferase YP_008564628.1 1596312 D 1335916 CDS YP_008564629.1 544390133 16979192 complement(1597253..1598146) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1598146 16979192 LY180_07595 Escherichia coli LY180 hypothetical protein YP_008564629.1 1597253 R 1335916 CDS YP_008564630.1 544390134 16979193 complement(1598225..1598905) 1 NC_022364.1 with NarGJH catalyzes the reduction of nitrate; the gamma subunit localizes NarGHI to the membrane; one of 3 nitrate reductases in E. coli and in E. coli is expressed when nitrate levels are high; Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrate reductase A subunit gamma 1598905 narI 16979193 narI Escherichia coli LY180 nitrate reductase A subunit gamma YP_008564630.1 1598225 R 1335916 CDS YP_008564631.1 544390135 16979194 complement(1598902..1599597) 1 NC_022364.1 delta subunit of nitrate reductase 1; chaperone for the insertion of the molybdenum cofactor and assembly of nitrate reductase 1; Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrate reductase molybdenum cofactor assembly chaperone NarJ 1599597 16979194 LY180_07605 Escherichia coli LY180 nitrate reductase molybdenum cofactor assembly chaperone NarJ YP_008564631.1 1598902 R 1335916 CDS YP_008564632.1 544390136 16979195 complement(1599597..1601141) 1 NC_022364.1 with NarGJI catalyzes the reduction of nitrate; the beta subunit is an iron sulfur cluster containing electron transfer subunit; one of 3 nitrate reductases in E. coli and in E. coli is expressed when nitrate levels are high; Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrate reductase A subunit beta 1601141 narH 16979195 narH Escherichia coli LY180 nitrate reductase A subunit beta YP_008564632.1 1599597 R 1335916 CDS YP_008564633.1 544390137 16979196 complement(1601138..1604878) 1 NC_022364.1 with NarYV catalyzes the reduction of nitrate; the beta subunit is an iron sulfur cluster containing electron transfer subunit; one of 3 nitrate reductases in E. coli; expression of nitrate reductase Z is not dependent on nitrate levels; Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrate reductase A subunit alpha 1604878 narZ 16979196 narZ Escherichia coli LY180 nitrate reductase A subunit alpha YP_008564633.1 1601138 R 1335916 CDS YP_008564634.1 544390138 16979197 complement(1604960..1606348) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrite extrusion protein 2 1606348 16979197 LY180_07620 Escherichia coli LY180 nitrite extrusion protein 2 YP_008564634.1 1604960 R 1335916 CDS YP_008564635.1 544390139 16979198 complement(1606672..1607967) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1607967 16979198 LY180_07625 Escherichia coli LY180 hypothetical protein YP_008564635.1 1606672 R 1335916 CDS YP_008564636.1 544392975 16979199 complement(1608026..1608316) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1608316 16979199 LY180_07630 Escherichia coli LY180 hypothetical protein YP_008564636.1 1608026 R 1335916 CDS YP_008564637.1 544390140 16979200 complement(1608575..1609456) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; aromatic amino acid exporter 1609456 16979200 LY180_07635 Escherichia coli LY180 aromatic amino acid exporter YP_008564637.1 1608575 R 1335916 CDS YP_008564638.1 544392976 16979201 1609688..1610275 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; sulfate ABC transporter substrate-binding protein 1610275 16979201 LY180_07640 Escherichia coli LY180 sulfate ABC transporter substrate-binding protein YP_008564638.1 1609688 D 1335916 CDS YP_008564639.1 544392977 16979202 1610324..1612735 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; formate dehydrogenase subunit alpha 1612735 16979202 LY180_07645 Escherichia coli LY180 formate dehydrogenase subunit alpha YP_008564639.1 1610324 D 1335916 CDS YP_008564640.1 544390141 16979203 1612748..1613632 1 NC_022364.1 beta subunit; involved in the use of formate as an electron donor during aerobic respiration; acts to transfer electrons from the major(alpha subunit) to the cytochrome b556(gamma subunit); Derived by automated computational analysis using gene prediction method: Protein Homology.; formate dehydrogenase-N subunit beta 1613632 16979203 LY180_07650 Escherichia coli LY180 formate dehydrogenase-N subunit beta YP_008564640.1 1612748 D 1335916 CDS YP_008564641.1 544390142 16979204 1613625..1614278 1 NC_022364.1 cytochrome b556(FDO) component; heme containing; Derived by automated computational analysis using gene prediction method: Protein Homology.; formate dehydrogenase-N subunit gamma 1614278 16979204 LY180_07655 Escherichia coli LY180 formate dehydrogenase-N subunit gamma YP_008564641.1 1613625 D 1335916 CDS YP_008564642.1 544390143 16979205 complement(1614329..1614613) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; XRE family transcriptional regulator 1614613 16979205 LY180_07660 Escherichia coli LY180 XRE family transcriptional regulator YP_008564642.1 1614329 R 1335916 CDS YP_008564643.1 544390144 16979206 complement(1614760..1615770) 1 NC_022364.1 similar to zinc-dependent eukaryotic ADH enzymes and distinct from fermentative ADHs; Derived by automated computational analysis using gene prediction method: Protein Homology.; acetaldehyde reductase 1615770 adhP 16979206 adhP Escherichia coli LY180 acetaldehyde reductase YP_008564643.1 1614760 R 1335916 CDS YP_008564644.1 544390145 16979207 complement(1615904..1617601) 1 NC_022364.1 malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; Derived by automated computational analysis using gene prediction method: Protein Homology.; malate dehydrogenase 1617601 16979207 LY180_07670 Escherichia coli LY180 malate dehydrogenase YP_008564644.1 1615904 R 1335916 CDS YP_008564645.1 544390146 16979208 complement(1617758..1617895) 1 NC_022364.1 protein D; stationary-phase-induced ribosome-associated; in Escherichia coli this protein becomes associated with the ribosome; expression increases during stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S22 1617895 rpsV 16979208 rpsV Escherichia coli LY180 30S ribosomal protein S22 YP_008564645.1 1617758 R 1335916 CDS YP_008564646.1 544390147 16979209 complement(1617997..1618212) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; biofilm-dependent modulation protein 1618212 16979209 LY180_07680 Escherichia coli LY180 biofilm-dependent modulation protein YP_008564646.1 1617997 R 1335916 CDS YP_008564647.1 544390148 16979210 1618558..1618989 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peroxiredoxin 1618989 16979210 LY180_07685 Escherichia coli LY180 peroxiredoxin YP_008564647.1 1618558 D 1335916 CDS YP_008564648.1 544390149 16979212 complement(1620947..1621843) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cytochrome C550 1621843 16979212 LY180_07695 Escherichia coli LY180 cytochrome C550 YP_008564648.1 1620947 R 1335916 CDS YP_008564649.1 544390150 16979213 complement(1621840..1622862) 1 NC_022364.1 transports peptides consisting of two or three amino acids; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide ABC transporter permease 1622862 16979213 LY180_07700 Escherichia coli LY180 peptide ABC transporter permease YP_008564649.1 1621840 R 1335916 CDS YP_008564650.1 544390151 16979214 complement(1622864..1624414) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide ABC transporter substrate-binding protein 1624414 16979214 LY180_07705 Escherichia coli LY180 peptide ABC transporter substrate-binding protein YP_008564650.1 1622864 R 1335916 CDS YP_008564651.1 544390152 16979216 complement(1625267..1627690) 1 NC_022364.1 heme-regulated phosphodiesterase with phosphodiesterase activity with cGMP; cold- and stationary phase-induced bioflim regulator; oxygen sensor; Derived by automated computational analysis using gene prediction method: Protein Homology.; diguanylate phosphodiesterase 1627690 16979216 LY180_07715 Escherichia coli LY180 diguanylate phosphodiesterase YP_008564651.1 1625267 R 1335916 CDS YP_008564652.1 544390153 16979217 complement(1627691..1629073) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; diguanylate cyclase 1629073 16979217 LY180_07720 Escherichia coli LY180 diguanylate cyclase YP_008564652.1 1627691 R 1335916 CDS YP_008564653.1 544390154 16979218 complement(1629445..1630764) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1630764 16979218 LY180_07725 Escherichia coli LY180 hypothetical protein YP_008564653.1 1629445 R 1335916 CDS YP_008564654.1 544390155 16979219 complement(1630895..1632430) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; antiporter 1632430 16979219 LY180_07730 Escherichia coli LY180 antiporter YP_008564654.1 1630895 R 1335916 CDS YP_008564655.1 544390156 16979220 complement(1632586..1633986) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glutamate decarboxylase 1633986 16979220 LY180_07735 Escherichia coli LY180 glutamate decarboxylase YP_008564655.1 1632586 R 1335916 CDS YP_008564656.1 544390157 16979221 complement(1634348..1637143) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; zinc protease 1637143 16979221 LY180_07740 Escherichia coli LY180 zinc protease YP_008564656.1 1634348 R 1335916 CDS YP_008564657.1 544390158 16979222 complement(1637188..1639560) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1639560 16979222 LY180_07745 Escherichia coli LY180 hypothetical protein YP_008564657.1 1637188 R 1335916 CDS YP_008564658.1 544390159 16979223 complement(1639598..1641283) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug ABC transporter ATP-binding protein 1641283 16979223 LY180_07750 Escherichia coli LY180 multidrug ABC transporter ATP-binding protein YP_008564658.1 1639598 R 1335916 CDS YP_008564659.1 544390160 16979224 complement(1641574..1642731) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; radical SAM protein 1642731 16979224 LY180_07755 Escherichia coli LY180 radical SAM protein YP_008564659.1 1641574 R 1335916 CDS YP_008564660.1 544392978 16979225 complement(1642783..1643340) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; sulfatase 1643340 16979225 LY180_07760 Escherichia coli LY180 sulfatase YP_008564660.1 1642783 R 1335916 CDS YP_008564661.1 544392979 16979226 1643643..1644206 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase 1644206 16979226 LY180_07765 Escherichia coli LY180 transposase YP_008564661.1 1643643 D 1335916 CDS YP_008564662.1 544390161 16979227 complement(1645466..1646341) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sulfatase 1646341 16979227 LY180_07770 Escherichia coli LY180 sulfatase YP_008564662.1 1645466 R 1335916 CDS YP_008564663.1 544390162 16979228 complement(1646743..1647504) 1 NC_022364.1 regulates the cellular response to acid resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.; AraC family transcriptional regulator 1647504 16979228 LY180_07775 Escherichia coli LY180 AraC family transcriptional regulator YP_008564663.1 1646743 R 1335916 CDS YP_008564664.1 544390163 16979229 complement(1647579..1647776) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Two-protein-system connector protein SafA 1647776 16979229 LY180_07780 Escherichia coli LY180 Two-protein-system connector protein SafA YP_008564664.1 1647579 R 1335916 CDS YP_008564665.1 544390164 16979230 complement(1648024..1650303) 1 NC_022364.1 in Escherichia coli it may be involved in repression of type III secretion system (TTSS) genes of the host cell; involved with increased resistance to low pH; member of the prokaryotic molybdopterin-containing oxidoreductase family; Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase 1650303 16979230 LY180_07785 Escherichia coli LY180 oxidoreductase YP_008564665.1 1648024 R 1335916 CDS YP_008564666.1 544390165 16979231 complement(1650637..1651551) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein FimH 1651551 16979231 LY180_07790 Escherichia coli LY180 fimbrial protein FimH YP_008564666.1 1650637 R 1335916 CDS YP_008564667.1 544390166 16979232 complement(1651611..1652114) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein FimG 1652114 16979232 LY180_07795 Escherichia coli LY180 fimbrial protein FimG YP_008564667.1 1651611 R 1335916 CDS YP_008564668.1 544390167 16979233 complement(1652127..1652657) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein ydeS 1652657 16979233 LY180_07800 Escherichia coli LY180 fimbrial protein ydeS YP_008564668.1 1652127 R 1335916 CDS YP_008564669.1 544390168 16979234 complement(1652671..1655322) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein FimD 1655322 16979234 LY180_07805 Escherichia coli LY180 fimbrial protein FimD YP_008564669.1 1652671 R 1335916 CDS YP_008564670.1 544390169 16979235 complement(1655364..1656074) 1 NC_022364.1 involved in type 1 fimbriae biosynthesis, interacts with FimH; Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial chaperone protein FimC 1656074 16979235 LY180_07810 Escherichia coli LY180 fimbrial chaperone protein FimC YP_008564670.1 1655364 R 1335916 CDS YP_008564671.1 544390170 16979236 complement(1656435..1656998) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; type-1 fimbrial protein subunit A 1656998 fimA 16979236 fimA Escherichia coli LY180 type-1 fimbrial protein subunit A YP_008564671.1 1656435 R 1335916 CDS YP_008564672.1 544392980 16979237 complement(1657350..1657571) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1657571 16979237 LY180_07820 Escherichia coli LY180 hypothetical protein YP_008564672.1 1657350 R 1335916 CDS YP_008564673.1 544392981 16979238 complement(1657950..1659272) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1659272 16979238 LY180_07825 Escherichia coli LY180 hypothetical protein YP_008564673.1 1657950 R 1335916 CDS YP_008564674.1 544390171 16979239 complement(1659272..1659538) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; antitoxin 1659538 16979239 LY180_07830 Escherichia coli LY180 antitoxin YP_008564674.1 1659272 R 1335916 CDS YP_008564675.1 544390172 16979240 complement(1659747..1665029) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1665029 16979240 LY180_07835 Escherichia coli LY180 hypothetical protein YP_008564675.1 1659747 R 1335916 CDS YP_008564676.1 544392982 16979241 complement(1665279..1666487) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1666487 16979241 LY180_07840 Escherichia coli LY180 hypothetical protein YP_008564676.1 1665279 R 1335916 CDS YP_008564677.1 544390173 16979242 complement(1666669..1668342) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; porin 1668342 16979242 LY180_07845 Escherichia coli LY180 porin YP_008564677.1 1666669 R 1335916 CDS YP_008564678.1 544390174 16979243 complement(1668398..1668709) 1 NC_022364.1 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; involved N,N'-diacetylchitobiose transport; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS N'-diacetylchitobiose transporter subunit IIA 1668709 16979243 LY180_07850 Escherichia coli LY180 PTS N'-diacetylchitobiose transporter subunit IIA YP_008564678.1 1668398 R 1335916 CDS YP_008564679.1 544392983 16979244 complement(1668737..1670059) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; PTS cellobiose transporter subunit IIC 1670059 16979244 LY180_07855 Escherichia coli LY180 PTS cellobiose transporter subunit IIC YP_008564679.1 1668737 R 1335916 CDS YP_008564680.1 544390175 16979245 complement(1670174..1670485) 1 NC_022364.1 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; involved in N,N'-diacetylchitobiose transport; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS N'-diacetylchitobiose transporter subunit IIB 1670485 16979245 LY180_07860 Escherichia coli LY180 PTS N'-diacetylchitobiose transporter subunit IIB YP_008564680.1 1670174 R 1335916 CDS YP_008564681.1 544392984 16979246 1670684..1671382 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; GntR family transcriptional regulator 1671382 16979246 LY180_07865 Escherichia coli LY180 GntR family transcriptional regulator YP_008564681.1 1670684 D 1335916 CDS YP_008564682.1 544390176 16979247 complement(1671427..1672326) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; O-acetylserine/cysteine export protein 1672326 16979247 LY180_07870 Escherichia coli LY180 O-acetylserine/cysteine export protein YP_008564682.1 1671427 R 1335916 CDS YP_008564683.1 544390177 16979248 1672521..1673708 1 NC_022364.1 YdeF; uncharacterized member of the major facilitator superfamily (MFS) of transporters; Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 1673708 16979248 LY180_07875 Escherichia coli LY180 transporter YP_008564683.1 1672521 D 1335916 CDS YP_008564684.1 544392985 16979249 1673835..1673930 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 1673930 16979249 LY180_07880 Escherichia coli LY180 membrane protein YP_008564684.1 1673835 D 1335916 CDS YP_008564685.1 544390178 16979250 complement(1674149..1675039) 1 NC_022364.1 required for pgaD induction; Derived by automated computational analysis using gene prediction method: Protein Homology.; diguanylate cyclase 1675039 16979250 LY180_07885 Escherichia coli LY180 diguanylate cyclase YP_008564685.1 1674149 R 1335916 CDS YP_008564686.1 544390179 16979251 complement(1675294..1675686) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1675686 16979251 LY180_07890 Escherichia coli LY180 hypothetical protein YP_008564686.1 1675294 R 1335916 CDS YP_008564687.1 544390180 16979252 1675962..1676480 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1676480 16979252 LY180_07895 Escherichia coli LY180 hypothetical protein YP_008564687.1 1675962 D 1335916 CDS YP_008564688.1 544390181 16979253 complement(1676525..1678570) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; dipeptidyl carboxypeptidase II 1678570 16979253 LY180_07900 Escherichia coli LY180 dipeptidyl carboxypeptidase II YP_008564688.1 1676525 R 1335916 CDS YP_008564689.1 544390182 16979254 1678707..1679453 1 NC_022364.1 NADP(+)-dependent; catalyzes the formation of 3-hydroxypropionate from the toxic malonic semialdehyde, catalyzes the formation of 2-aminomalonate-semialdehyde from L-serine; can also use 3-hydroxybutyrate, 3-hydroxy-isobutyrate, D-threonine, L-allo-threonine,D-serine; Derived by automated computational analysis using gene prediction method: Protein Homology.; malonic semialdehyde reductase 1679453 16979254 LY180_07905 Escherichia coli LY180 malonic semialdehyde reductase YP_008564689.1 1678707 D 1335916 CDS YP_008564690.1 544390183 16979255 1679542..1680228 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; GntR family transcriptional regulator 1680228 16979255 LY180_07910 Escherichia coli LY180 GntR family transcriptional regulator YP_008564690.1 1679542 D 1335916 CDS YP_008564691.1 544390184 16979256 1680406..1680609 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1680609 16979256 LY180_07915 Escherichia coli LY180 hypothetical protein YP_008564691.1 1680406 D 1335916 CDS YP_008564692.1 544390185 16979257 complement(1680645..1682105) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; D-mannonate oxidoreductase 1682105 16979257 LY180_07920 Escherichia coli LY180 D-mannonate oxidoreductase YP_008564692.1 1680645 R 1335916 CDS YP_008564693.1 544392986 16979258 complement(1682194..1683477) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1683477 16979258 LY180_07925 Escherichia coli LY180 hypothetical protein YP_008564693.1 1682194 R 1335916 CDS YP_008564694.1 544390186 16979259 1684264..1684497 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1684497 16979259 LY180_07930 Escherichia coli LY180 hypothetical protein YP_008564694.1 1684264 D 1335916 CDS YP_008564695.1 544392987 16979260 complement(1684962..1686170) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1686170 16979260 LY180_07935 Escherichia coli LY180 hypothetical protein YP_008564695.1 1684962 R 1335916 CDS YP_008564696.1 544390187 16979261 1686317..1686742 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA invertase 1686742 16979261 LY180_07940 Escherichia coli LY180 DNA invertase YP_008564696.1 1686317 D 1335916 CDS YP_008564697.1 544392988 16979262 complement(1686840..1687403) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; tail assembly protein 1687403 16979262 LY180_07945 Escherichia coli LY180 tail assembly protein YP_008564697.1 1686840 R 1335916 CDS YP_008564698.1 544390188 16979263 complement(1687415..1690489) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 1690489 16979263 LY180_07950 Escherichia coli LY180 tail protein YP_008564698.1 1687415 R 1335916 CDS YP_008564699.1 544390189 16979264 complement(1690554..1691153) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1691153 16979264 LY180_07955 Escherichia coli LY180 hypothetical protein YP_008564699.1 1690554 R 1335916 CDS YP_008564700.1 544390190 16979265 complement(1691224..1694637) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; host specificity protein J 1694637 16979265 LY180_07960 Escherichia coli LY180 host specificity protein J YP_008564700.1 1691224 R 1335916 CDS YP_008564701.1 544392989 16979266 complement(1694698..1695270) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1695270 16979266 LY180_07965 Escherichia coli LY180 hypothetical protein YP_008564701.1 1694698 R 1335916 CDS YP_008564702.1 544390191 16979267 complement(1695267..1696010) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 1696010 16979267 LY180_07970 Escherichia coli LY180 tail protein YP_008564702.1 1695267 R 1335916 CDS YP_008564703.1 544390192 16979268 complement(1696016..1696714) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 1696714 16979268 LY180_07975 Escherichia coli LY180 tail protein YP_008564703.1 1696016 R 1335916 CDS YP_008564704.1 544390193 16979269 complement(1696714..1697043) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 1697043 16979269 LY180_07980 Escherichia coli LY180 tail protein YP_008564704.1 1696714 R 1335916 CDS YP_008564705.1 544390194 16979270 complement(1697040..1699601) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1699601 16979270 LY180_07985 Escherichia coli LY180 hypothetical protein YP_008564705.1 1697040 R 1335916 CDS YP_008564706.1 544390195 16979271 complement(1699594..1700028) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 1700028 16979271 LY180_07990 Escherichia coli LY180 tail protein YP_008564706.1 1699594 R 1335916 CDS YP_008564707.1 544390196 16979272 complement(1700010..1700432) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 1700432 16979272 LY180_07995 Escherichia coli LY180 tail protein YP_008564707.1 1700010 R 1335916 CDS YP_008564708.1 544390197 16979273 complement(1700448..1701206) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 1701206 16979273 LY180_08000 Escherichia coli LY180 tail protein YP_008564708.1 1700448 R 1335916 CDS YP_008564709.1 544390198 16979274 complement(1701196..1701591) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 1701591 16979274 LY180_08005 Escherichia coli LY180 tail protein YP_008564709.1 1701196 R 1335916 CDS YP_008564710.1 544390199 16979275 complement(1701588..1702166) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 1702166 16979275 LY180_08010 Escherichia coli LY180 tail protein YP_008564710.1 1701588 R 1335916 CDS YP_008564711.1 544390200 16979276 complement(1702178..1702531) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail attachment protein 1702531 16979276 LY180_08015 Escherichia coli LY180 tail attachment protein YP_008564711.1 1702178 R 1335916 CDS YP_008564712.1 544390201 16979277 complement(1702543..1702941) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA-packaging protein FI 1702941 16979277 LY180_08020 Escherichia coli LY180 DNA-packaging protein FI YP_008564712.1 1702543 R 1335916 CDS YP_008564713.1 544390202 16979278 complement(1702983..1704008) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; head protein 1704008 16979278 LY180_08025 Escherichia coli LY180 head protein YP_008564713.1 1702983 R 1335916 CDS YP_008564714.1 544390203 16979279 complement(1704406..1705725) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; capsid assembly protein 1705725 16979279 LY180_08030 Escherichia coli LY180 capsid assembly protein YP_008564714.1 1704406 R 1335916 CDS YP_008564715.1 544390204 16979280 complement(1705706..1707307) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; plasmid partitioning protein ParB 1707307 16979280 LY180_08035 Escherichia coli LY180 plasmid partitioning protein ParB YP_008564715.1 1705706 R 1335916 CDS YP_008564716.1 544390205 16979281 complement(1707304..1707510) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; head-tail joining protein 1707510 16979281 LY180_08040 Escherichia coli LY180 head-tail joining protein YP_008564716.1 1707304 R 1335916 CDS YP_008564717.1 544390206 16979282 complement(1707507..1709432) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; terminase 1709432 16979282 LY180_08045 Escherichia coli LY180 terminase YP_008564717.1 1707507 R 1335916 CDS YP_008564718.1 544392990 16979283 complement(1709407..1709952) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; protein convertase 1709952 16979283 LY180_08050 Escherichia coli LY180 protein convertase YP_008564718.1 1709407 R 1335916 CDS YP_008564719.1 544390207 16979284 1710632..1711042 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1711042 16979284 LY180_08055 Escherichia coli LY180 hypothetical protein YP_008564719.1 1710632 D 1335916 CDS YP_008564720.1 544390208 16979285 complement(1711194..1711367) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; gns 1711367 16979285 LY180_08060 Escherichia coli LY180 gns YP_008564720.1 1711194 R 1335916 CDS YP_008564721.1 544392991 16979286 complement(1711539..1711769) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1711769 16979286 LY180_08065 Escherichia coli LY180 hypothetical protein YP_008564721.1 1711539 R 1335916 CDS YP_008564722.1 544390209 16979287 complement(1712041..1712253) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cold-shock protein 1712253 16979287 LY180_08070 Escherichia coli LY180 cold-shock protein YP_008564722.1 1712041 R 1335916 CDS YP_008564723.1 544390210 16979288 complement(1712616..1713113) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1713113 16979288 LY180_08075 Escherichia coli LY180 hypothetical protein YP_008564723.1 1712616 R 1335916 CDS YP_008564724.1 544390211 16979289 complement(1713110..1713643) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; lysozyme 1713643 16979289 LY180_08080 Escherichia coli LY180 lysozyme YP_008564724.1 1713110 R 1335916 CDS YP_008564725.1 544390212 16979290 complement(1713640..1713951) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1713951 16979290 LY180_08085 Escherichia coli LY180 hypothetical protein YP_008564725.1 1713640 R 1335916 CDS YP_008564726.1 544390213 16979291 complement(1713956..1714171) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; holin 1714171 16979291 LY180_08090 Escherichia coli LY180 holin YP_008564726.1 1713956 R 1335916 CDS YP_008564727.1 544390214 16979292 complement(1714925..1715140) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cold-shock protein 1715140 16979292 LY180_08095 Escherichia coli LY180 cold-shock protein YP_008564727.1 1714925 R 1335916 CDS YP_008564728.1 544390215 16979293 1715441..1715653 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cold-shock protein 1715653 16979293 LY180_08100 Escherichia coli LY180 cold-shock protein YP_008564728.1 1715441 D 1335916 CDS YP_008564729.1 544390216 16979294 complement(1716075..1716827) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; antitermination protein 1716827 16979294 LY180_08105 Escherichia coli LY180 antitermination protein YP_008564729.1 1716075 R 1335916 CDS YP_008564730.1 544390217 16979295 complement(1716841..1717863) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1717863 16979295 LY180_08110 Escherichia coli LY180 hypothetical protein YP_008564730.1 1716841 R 1335916 CDS YP_008564731.1 544390218 16979296 complement(1718237..1718488) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1718488 16979296 LY180_08115 Escherichia coli LY180 hypothetical protein YP_008564731.1 1718237 R 1335916 CDS YP_008564732.1 544390219 16979297 complement(1718705..1718860) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; protein hokC 1718860 16979297 LY180_08120 Escherichia coli LY180 protein hokC YP_008564732.1 1718705 R 1335916 CDS YP_008564733.1 544390220 16979298 complement(1718932..1719219) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; RelE toxin 1719219 16979298 LY180_08125 Escherichia coli LY180 RelE toxin YP_008564733.1 1718932 R 1335916 CDS YP_008564734.1 544390221 16979299 complement(1719219..1719458) 1 NC_022364.1 Qin prophage; bifunctional antitoxin of the RelE-RelB toxin-antitoxin system/transcriptional repressor; Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional antitoxin/transcriptional repressor RelB 1719458 16979299 LY180_08130 Escherichia coli LY180 bifunctional antitoxin/transcriptional repressor RelB YP_008564734.1 1719219 R 1335916 CDS YP_008564735.1 544392992 16979300 complement(1720760..1722073) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase 1722073 16979300 LY180_08135 Escherichia coli LY180 transposase YP_008564735.1 1720760 R 1335916 CDS YP_008564736.1 544392993 16979301 complement(1722408..1722587) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 1722587 16979301 LY180_08140 Escherichia coli LY180 membrane protein YP_008564736.1 1722408 R 1335916 CDS YP_008564737.1 544392994 16979302 complement(1723019..1723129) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1723129 16979302 LY180_08145 Escherichia coli LY180 hypothetical protein YP_008564737.1 1723019 R 1335916 CDS YP_008564738.1 544392995 16979304 complement(1723367..1723477) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1723477 16979304 LY180_08155 Escherichia coli LY180 hypothetical protein YP_008564738.1 1723367 R 1335916 CDS YP_008564739.1 544392996 16982296 complement(1724093..1724515) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1724515 16982296 LY180_08160 Escherichia coli LY180 hypothetical protein YP_008564739.1 1724093 R 1335916 CDS YP_008564740.1 544392997 16979306 complement(1724556..1725521) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1725521 16979306 LY180_08165 Escherichia coli LY180 hypothetical protein YP_008564740.1 1724556 R 1335916 CDS YP_008564741.1 544390222 16979307 complement(1725502..1726023) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1726023 16979307 LY180_08170 Escherichia coli LY180 hypothetical protein YP_008564741.1 1725502 R 1335916 CDS YP_008564742.1 544390223 16979308 complement(1726007..1726237) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 1726237 16979308 LY180_08175 Escherichia coli LY180 transcriptional regulator YP_008564742.1 1726007 R 1335916 CDS YP_008564743.1 544390224 16979309 1726321..1726728 1 NC_022364.1 The transcriptional repressor of DicA (divison cell) has a hypothetical DNA binding domain. It represses the transcription of dicB and dicC, but its specific role in cellular replication and mode of action are still unknown; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 1726728 16979309 LY180_08180 Escherichia coli LY180 transcriptional regulator YP_008564743.1 1726321 D 1335916 CDS YP_008564744.1 544390225 16979310 1726895..1727050 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1727050 16979310 LY180_08185 Escherichia coli LY180 hypothetical protein YP_008564744.1 1726895 D 1335916 CDS YP_008564745.1 544390226 16979311 1727052..1727180 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1727180 16979311 LY180_08190 Escherichia coli LY180 hypothetical protein YP_008564745.1 1727052 D 1335916 CDS YP_008564746.1 544390227 16979312 1727210..1727428 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1727428 16979312 LY180_08195 Escherichia coli LY180 hypothetical protein YP_008564746.1 1727210 D 1335916 CDS YP_008564747.1 544390228 16979313 1727996..1728184 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division inhibition protein DicB 1728184 16979313 LY180_08200 Escherichia coli LY180 cell division inhibition protein DicB YP_008564747.1 1727996 D 1335916 CDS YP_008564748.1 544390229 16979314 1728181..1728372 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1728372 16979314 LY180_08205 Escherichia coli LY180 hypothetical protein YP_008564748.1 1728181 D 1335916 CDS YP_008564749.1 544390230 16979315 1728465..1730942 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1730942 16979315 LY180_08210 Escherichia coli LY180 hypothetical protein YP_008564749.1 1728465 D 1335916 CDS YP_008564750.1 544390231 16979316 1731015..1731266 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA-binding protein 1731266 16979316 LY180_08215 Escherichia coli LY180 DNA-binding protein YP_008564750.1 1731015 D 1335916 CDS YP_008564751.1 544390232 16979317 1731286..1732581 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; integrase 1732581 16979317 LY180_08220 Escherichia coli LY180 integrase YP_008564751.1 1731286 D 1335916 CDS YP_008564752.1 544392998 16979318 1732751..1733959 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1733959 16979318 LY180_08225 Escherichia coli LY180 hypothetical protein YP_008564752.1 1732751 D 1335916 CDS YP_008564753.1 544390233 16979319 complement(1734107..1735126) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; galactonate oxidoreductase 1735126 16979319 LY180_08230 Escherichia coli LY180 galactonate oxidoreductase YP_008564753.1 1734107 R 1335916 CDS YP_008564754.1 544390234 16979320 complement(1735138..1736352) 1 NC_022364.1 starvation-sensing protein; maybe involved in homoserine lactone degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional D-altronate/D-mannonate dehydratase 1736352 16979320 LY180_08235 Escherichia coli LY180 bifunctional D-altronate/D-mannonate dehydratase YP_008564754.1 1735138 R 1335916 CDS YP_008564755.1 544390235 16979321 complement(1736558..1736884) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1736884 16979321 LY180_08240 Escherichia coli LY180 membrane protein YP_008564755.1 1736558 R 1335916 CDS YP_008564756.1 544390236 16979322 1737019..1737360 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1737360 16979322 LY180_08245 Escherichia coli LY180 hypothetical protein YP_008564756.1 1737019 D 1335916 CDS YP_008564757.1 544390237 16979323 1737395..1737955 1 NC_022364.1 catalyzes the formation of N(1)- and N(8)-acetylspermidine from spermidine; Derived by automated computational analysis using gene prediction method: Protein Homology.; spermidine N1-acetyltransferase 1737955 16979323 LY180_08250 Escherichia coli LY180 spermidine N1-acetyltransferase YP_008564757.1 1737395 D 1335916 CDS YP_008564758.1 544390238 16979324 complement(1737958..1738704) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; lipoprotein 1738704 16979324 LY180_08255 Escherichia coli LY180 lipoprotein YP_008564758.1 1737958 R 1335916 CDS YP_008564759.1 544390239 16979325 1738776..1739081 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1739081 16979325 LY180_08260 Escherichia coli LY180 membrane protein YP_008564759.1 1738776 D 1335916 CDS YP_008564760.1 544390240 16979326 1739280..1741706 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; dimethyl sulfoxide reductase subunit A 1741706 16979326 LY180_08265 Escherichia coli LY180 dimethyl sulfoxide reductase subunit A YP_008564760.1 1739280 D 1335916 CDS YP_008564761.1 544390241 16979327 1741764..1744190 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; dimethyl sulfoxide reductase subunit A 1744190 16979327 LY180_08270 Escherichia coli LY180 dimethyl sulfoxide reductase subunit A YP_008564761.1 1741764 D 1335916 CDS YP_008564762.1 544390242 16979328 1744201..1744818 1 NC_022364.1 oxidoreductase, Fe-S subunit; terminal electron transfer protein for the reduction of DMSO; Derived by automated computational analysis using gene prediction method: Protein Homology.; dimethyl sulfoxide reductase subunit B 1744818 16979328 LY180_08275 Escherichia coli LY180 dimethyl sulfoxide reductase subunit B YP_008564762.1 1744201 D 1335916 CDS YP_008564763.1 544390243 16979329 1744820..1745674 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; dimethyl sulfoxide reductase subunit H 1745674 16979329 LY180_08280 Escherichia coli LY180 dimethyl sulfoxide reductase subunit H YP_008564763.1 1744820 D 1335916 CDS YP_008564764.1 544390244 16979330 1745717..1746331 1 NC_022364.1 binds to the twin-arginine signal peptides of certain proteins, including dimethylsulfoxide reductase and trimethylamine N-oxide reductase that are translocated to the cytoplasmic membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; twin-argninine leader-binding protein DmsD 1746331 16979330 LY180_08285 Escherichia coli LY180 twin-argninine leader-binding protein DmsD YP_008564764.1 1745717 D 1335916 CDS YP_008564765.1 544390245 16979331 1746526..1747782 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; voltage-gated ClC-type chloride channel ClcB 1747782 16979331 LY180_08290 Escherichia coli LY180 voltage-gated ClC-type chloride channel ClcB YP_008564765.1 1746526 D 1335916 CDS YP_008564766.1 544390246 16979332 complement(1747735..1748430) 1 NC_022364.1 DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; Derived by automated computational analysis using gene prediction method: Protein Homology.; dithiobiotin synthetase 1748430 bioD 16979332 bioD Escherichia coli LY180 dithiobiotin synthetase YP_008564766.1 1747735 R 1335916 CDS YP_008564767.1 544390247 16979333 complement(1748555..1749418) 1 NC_022364.1 mlc, controls the expression of genes involved in the phosphotransferase and phosphoenolpyruvate systems, regulates genes involved in the uptake of sugars; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 1749418 16979333 LY180_08300 Escherichia coli LY180 transcriptional regulator YP_008564767.1 1748555 R 1335916 CDS YP_008564768.1 544390248 16979334 complement(1749421..1749924) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; insB 1749924 16979334 LY180_08305 Escherichia coli LY180 insB YP_008564768.1 1749421 R 1335916 CDS YP_008564769.1 544392999 16979335 complement(1750169..1750552) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; gdgsA 1750552 16979335 LY180_08310 Escherichia coli LY180 gdgsA YP_008564769.1 1750169 R 1335916 CDS YP_008564770.1 544390249 16979336 complement(1750687..1751580) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LysR family transcripitonal regulator 1751580 16979336 LY180_08315 Escherichia coli LY180 LysR family transcripitonal regulator YP_008564770.1 1750687 R 1335916 CDS YP_008564771.1 544390250 16979337 1751687..1752940 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1752940 16979337 LY180_08320 Escherichia coli LY180 membrane protein YP_008564771.1 1751687 D 1335916 CDS YP_008564772.1 544390251 16979338 1753337..1753672 1 NC_022364.1 required for growth and survival under moderately acid conditions; Derived by automated computational analysis using gene prediction method: Protein Homology.; acid-shock protein 1753672 16979338 LY180_08325 Escherichia coli LY180 acid-shock protein YP_008564772.1 1753337 D 1335916 CDS YP_008564773.1 544393000 16979339 1753765..1753848 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1753848 16979339 LY180_08330 Escherichia coli LY180 hypothetical protein YP_008564773.1 1753765 D 1335916 CDS YP_008564774.1 544390252 16979340 1753948..1754769 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; serine protease 1754769 16979340 LY180_08335 Escherichia coli LY180 serine protease YP_008564774.1 1753948 D 1335916 CDS YP_008564775.1 544390253 16979341 complement(1754808..1755137) 1 NC_022364.1 with MdtJ is involved in resistance to deoxycholate, nalidixic acid, fosfomycin, and SDS; Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug transporter 1755137 16979341 LY180_08340 Escherichia coli LY180 multidrug transporter YP_008564775.1 1754808 R 1335916 CDS YP_008564776.1 544390254 16979342 complement(1755124..1755489) 1 NC_022364.1 with MdtI is involved in resistance to deoxycholate , nalidixic acid, fosfomycin, and SDS; Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug transporter 1755489 16979342 LY180_08345 Escherichia coli LY180 multidrug transporter YP_008564776.1 1755124 R 1335916 CDS YP_008564777.1 544390255 16979343 1755901..1756935 1 NC_022364.1 transport of quorum-sensing signal; mutations in this gene alters the transport of the quorum-sensing signal autoinducer 2 (AI-2) which affects expression of a large number of genes; Derived by automated computational analysis using gene prediction method: Protein Homology.; pheromone autoinducer 2 transporter 1756935 tqsA 16979343 tqsA Escherichia coli LY180 pheromone autoinducer 2 transporter YP_008564777.1 1755901 D 1335916 CDS YP_008564778.1 544390256 16979344 complement(1756960..1758348) 1 NC_022364.1 catalyzes reversible transfer of hydride ion equivalent between NAD and NADP; membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane; forms a tetramer composed of two alpha and 2 beta subunits; AB-stereospecific enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.; pyridine nucleotide transhydrogenase 1758348 pntB 16979344 pntB Escherichia coli LY180 pyridine nucleotide transhydrogenase YP_008564778.1 1756960 R 1335916 CDS YP_008564779.1 544390257 16979345 complement(1758359..1759891) 1 NC_022364.1 forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane; involved in catalyzing transfer of hydride ion equivalents between NAD and NADP; stereospecific (AB-specific); functions as a proton pump by translocating protons from cytoplasm to periplasm; Derived by automated computational analysis using gene prediction method: Protein Homology.; NAD(P) transhydrogenase subunit alpha 1759891 pntA 16979345 pntA Escherichia coli LY180 NAD(P) transhydrogenase subunit alpha YP_008564779.1 1758359 R 1335916 CDS YP_008564780.1 544390258 16979346 1760415..1761359 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1761359 16979346 LY180_08365 Escherichia coli LY180 hypothetical protein YP_008564780.1 1760415 D 1335916 CDS YP_008564781.1 544390259 16979347 1761545..1762927 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; arginine:ornithine antiporter 1762927 16979347 LY180_08370 Escherichia coli LY180 arginine:ornithine antiporter YP_008564781.1 1761545 D 1335916 CDS YP_008564782.1 544390260 16979348 1762964..1763686 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; dihydromonapterin reductase 1763686 16979348 LY180_08375 Escherichia coli LY180 dihydromonapterin reductase YP_008564782.1 1762964 D 1335916 CDS YP_008564783.1 544390261 16979349 complement(1763683..1764018) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1764018 16979349 LY180_08380 Escherichia coli LY180 membrane protein YP_008564783.1 1763683 R 1335916 CDS YP_008564784.1 544390262 16979350 1764147..1764866 1 NC_022364.1 response regulator in two-component regulatory system with RstB; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 1764866 16979350 LY180_08385 Escherichia coli LY180 transcriptional regulator YP_008564784.1 1764147 D 1335916 CDS YP_008564785.1 544390263 16979351 1764870..1766171 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sensor protein RstB 1766171 16979351 LY180_08390 Escherichia coli LY180 sensor protein RstB YP_008564785.1 1764870 D 1335916 CDS YP_008564786.1 544390264 16979352 1766247..1767176 1 NC_022364.1 binds to DNA replication terminator sequences to prevent passage of replication forks; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA-binding protein 1767176 16979352 LY180_08395 Escherichia coli LY180 DNA-binding protein YP_008564786.1 1766247 D 1335916 CDS YP_008564787.1 544390265 16979353 complement(1767173..1768576) 1 NC_022364.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; Derived by automated computational analysis using gene prediction method: Protein Homology.; fumarate hydratase 1768576 fumC 16979353 fumC Escherichia coli LY180 fumarate hydratase YP_008564787.1 1767173 R 1335916 CDS YP_008564788.1 544390266 16979354 complement(1768719..1770365) 1 NC_022364.1 catalyzes the formation of malate from fumerate; Derived by automated computational analysis using gene prediction method: Protein Homology.; fumarate hydratase 1770365 16979354 LY180_08405 Escherichia coli LY180 fumarate hydratase YP_008564788.1 1768719 R 1335916 CDS YP_008564789.1 544390267 16979355 1770564..1771739 1 NC_022364.1 catalyzes the formation of of fructose 6-phosphate from mannose 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; mannose-6-phosphate isomerase 1771739 16979355 LY180_08410 Escherichia coli LY180 mannose-6-phosphate isomerase YP_008564789.1 1770564 D 1335916 CDS YP_008564790.1 544390268 16979356 1771840..1773348 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1773348 16979356 LY180_08415 Escherichia coli LY180 hypothetical protein YP_008564790.1 1771840 D 1335916 CDS YP_008564791.1 544390269 16979357 complement(1773574..1774839) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; porin 1774839 16979357 LY180_08420 Escherichia coli LY180 porin YP_008564791.1 1773574 R 1335916 CDS YP_008564792.1 544390270 16979358 complement(1774878..1776251) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glucuronide transporter 1776251 16979358 LY180_08425 Escherichia coli LY180 glucuronide transporter YP_008564792.1 1774878 R 1335916 CDS YP_008564793.1 544390271 16979359 complement(1776248..1778059) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; beta-D-glucuronidase 1778059 16979359 LY180_08430 Escherichia coli LY180 beta-D-glucuronidase YP_008564793.1 1776248 R 1335916 CDS YP_008564794.1 544390272 16979360 complement(1778447..1779037) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; TetR family transcriptional regulator 1779037 16979360 LY180_08435 Escherichia coli LY180 TetR family transcriptional regulator YP_008564794.1 1778447 R 1335916 CDS YP_008564795.1 544390273 16979361 complement(1779266..1780033) 1 NC_022364.1 Acts on the hydroxyl group at position 7 of the steroid frame; Derived by automated computational analysis using gene prediction method: Protein Homology.; 7-alpha-hydroxysteroid dehydrogenase 1780033 16979361 LY180_08440 Escherichia coli LY180 7-alpha-hydroxysteroid dehydrogenase YP_008564795.1 1779266 R 1335916 CDS YP_008564796.1 544393001 16979362 complement(1780140..1781348) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1781348 16979362 LY180_08445 Escherichia coli LY180 hypothetical protein YP_008564796.1 1780140 R 1335916 CDS YP_008564797.1 544390274 16979363 complement(1781483..1782511) 1 NC_022364.1 regulates malXY which are involved in maltose-glucose transport; Derived by automated computational analysis using gene prediction method: Protein Homology.; LacI family transcriptional regulator 1782511 16979363 LY180_08450 Escherichia coli LY180 LacI family transcriptional regulator YP_008564797.1 1781483 R 1335916 CDS YP_008564798.1 544390275 16979364 1782686..1784278 1 NC_022364.1 phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS); catalyzes the phosphorylation of maltose and glucose concomitant with their translocation across the cell membrane; component IIB catalyzes the phosphorylation of the sugar molecule; IIC forms the translocation channel and contains the substrate specific binding site; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS maltose transporter subunit IICB 1784278 16979364 LY180_08455 Escherichia coli LY180 PTS maltose transporter subunit IICB YP_008564798.1 1782686 D 1335916 CDS YP_008564799.1 544390276 16979365 1784288..1785460 1 NC_022364.1 catalyzes the formation of homocysteine and pyruvate from cystathionine; also acts a a negative regulator for the mal regulon but interacting with the transcriptional activator MalT; Derived by automated computational analysis using gene prediction method: Protein Homology.; aminotransferase 1785460 16979365 LY180_08460 Escherichia coli LY180 aminotransferase YP_008564799.1 1784288 D 1335916 CDS YP_008564800.1 544390277 16979366 1785564..1786565 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; adenosine deaminase 1786565 16979366 LY180_08465 Escherichia coli LY180 adenosine deaminase YP_008564800.1 1785564 D 1335916 CDS YP_008564801.1 544390278 16979367 complement(1786600..1787640) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase 1787640 16979367 LY180_08470 Escherichia coli LY180 oxidoreductase YP_008564801.1 1786600 R 1335916 CDS YP_008564802.1 544390279 16979368 1788281..1788496 1 NC_022364.1 YdgT; in E. coli, when complexed with H-NS or StpA binds a 26 base-pair DNA sequence of oriC; seems to play a role in optimizing the activity of oriC; non-essential; Hha protein paralog; in an hha mutant background, cnu is overexpressed and can compensate hha-induced phenotypes; Derived by automated computational analysis using gene prediction method: Protein Homology.; oriC-binding nucleoid-associated protein 1788496 16979368 LY180_08475 Escherichia coli LY180 oriC-binding nucleoid-associated protein YP_008564802.1 1788281 D 1335916 CDS YP_008564803.1 544390280 16979369 1788582..1789022 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1789022 16979369 LY180_08480 Escherichia coli LY180 membrane protein YP_008564803.1 1788582 D 1335916 CDS YP_008564804.1 544390281 16979370 1789099..1789680 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; electron transport complex RsxE subunit 1789680 16979370 LY180_08485 Escherichia coli LY180 electron transport complex RsxE subunit YP_008564804.1 1789099 D 1335916 CDS YP_008564805.1 544390282 16979371 1789680..1790258 1 NC_022364.1 part of membrane-bound complex thought to be involved in electron transport to nitrogen; Derived by automated computational analysis using gene prediction method: Protein Homology.; electron transporter RnfD 1790258 16979371 LY180_08490 Escherichia coli LY180 electron transporter RnfD YP_008564805.1 1789680 D 1335916 CDS YP_008564806.1 544390283 16979372 1790251..1792473 1 NC_022364.1 part of membrane-bound complex thought to be involved in electron transport to nitrogen; Derived by automated computational analysis using gene prediction method: Protein Homology.; electron transporter RnfC 1792473 16979372 LY180_08495 Escherichia coli LY180 electron transporter RnfC YP_008564806.1 1790251 D 1335916 CDS YP_008564807.1 544390284 16979373 1792474..1793532 1 NC_022364.1 RnfD; RsxD; required for nitrogen fixation in Rhodobacter capsulatus; part of a membrane-bound complex thought to be involved in electron transport to nitrogenase; in Escherichia coli this gene is part of a cluster controlling SoxR-mediated induction of the SoxS transcription factor in the absence of oxidizing agents; Derived by automated computational analysis using gene prediction method: Protein Homology.; electron transporter RnfG 1793532 rnfD 16979373 rnfD Escherichia coli LY180 electron transporter RnfG YP_008564807.1 1792474 D 1335916 CDS YP_008564808.1 544390285 16979374 1793536..1794156 1 NC_022364.1 part of membrane-bound complex hought to be involved in electron transport to nitrogen; Derived by automated computational analysis using gene prediction method: Protein Homology.; electron transport complex protein RsxA 1794156 16979374 LY180_08505 Escherichia coli LY180 electron transport complex protein RsxA YP_008564808.1 1793536 D 1335916 CDS YP_008564809.1 544390286 16979375 1794160..1794855 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; elongation factor G 1794855 16979375 LY180_08510 Escherichia coli LY180 elongation factor G YP_008564809.1 1794160 D 1335916 CDS YP_008564810.1 544390287 16979376 1794855..1795490 1 NC_022364.1 DNA-(apurinic or apyrimidinic site) lyase; has apurinic or apyrimidinic endonuclease activity and DNA N-glycosylase activity; removed damaged DNA at cytosines, thymines and guanines; Derived by automated computational analysis using gene prediction method: Protein Homology.; endonuclease IV 1795490 16979376 LY180_08515 Escherichia coli LY180 endonuclease IV YP_008564810.1 1794855 D 1335916 CDS YP_008564811.1 544393002 16979377 1795618..1795818 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1795818 16979377 LY180_08520 Escherichia coli LY180 hypothetical protein YP_008564811.1 1795618 D 1335916 CDS YP_008564812.1 544390288 16979378 1796101..1797603 1 NC_022364.1 mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium; member of proton-dependent oligopeptide transport (POT) system family; in Escherichia coli this gene is regulated by OmpR although not via osmoregulation; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide ABC transporter permease 1797603 tppB 16979378 tppB Escherichia coli LY180 peptide ABC transporter permease YP_008564812.1 1796101 D 1335916 CDS YP_008564813.1 544390289 16979379 1797709..1798314 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glutathionine S-transferase 1798314 16979379 LY180_08530 Escherichia coli LY180 glutathionine S-transferase YP_008564813.1 1797709 D 1335916 CDS YP_008564814.1 544390290 16979380 complement(1798358..1799218) 1 NC_022364.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal; Derived by automated computational analysis using gene prediction method: Protein Homology.; pyridoxamine kinase 1799218 16979380 LY180_08535 Escherichia coli LY180 pyridoxamine kinase YP_008564814.1 1798358 R 1335916 CDS YP_008564815.1 544390291 16979381 complement(1799280..1800554) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tyrosyl-tRNA synthetase 1800554 16979381 LY180_08540 Escherichia coli LY180 tyrosyl-tRNA synthetase YP_008564815.1 1799280 R 1335916 CDS YP_008564816.1 544390292 16979382 complement(1800683..1801339) 1 NC_022364.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; pyridoxamine 5'-phosphate oxidase 1801339 16979382 LY180_08545 Escherichia coli LY180 pyridoxamine 5'-phosphate oxidase YP_008564816.1 1800683 R 1335916 CDS YP_008564817.1 544390293 16979383 complement(1801398..1801727) 1 NC_022364.1 MliC; membrane-bound lysozyme inhibitor of c-type lysozyme; Derived by automated computational analysis using gene prediction method: Protein Homology.; lysozyme inhibitor 1801727 16979383 LY180_08550 Escherichia coli LY180 lysozyme inhibitor YP_008564817.1 1801398 R 1335916 CDS YP_008564818.1 544390294 16979384 complement(1801825..1802934) 1 NC_022364.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; Derived by automated computational analysis using gene prediction method: Protein Homology.; anhydro-N-acetylmuramic acid kinase 1802934 anmK 16979384 anmK Escherichia coli LY180 anhydro-N-acetylmuramic acid kinase YP_008564818.1 1801825 R 1335916 CDS YP_008564819.1 544390295 16979385 1803208..1803675 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; outer membrane lipoprotein pcp 1803675 16979385 LY180_08560 Escherichia coli LY180 outer membrane lipoprotein pcp YP_008564819.1 1803208 D 1335916 CDS YP_008564820.1 544390296 16979386 complement(1803722..1804162) 1 NC_022364.1 Transcription regulator that can both activate or repress expression; Derived by automated computational analysis using gene prediction method: Protein Homology.; MarR family transcriptional regulator 1804162 16979386 LY180_08565 Escherichia coli LY180 MarR family transcriptional regulator YP_008564820.1 1803722 R 1335916 CDS YP_008564821.1 544390297 16979387 1804357..1804593 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1804593 16979387 LY180_08570 Escherichia coli LY180 membrane protein YP_008564821.1 1804357 D 1335916 CDS YP_008564822.1 544390298 16979388 1804596..1805453 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1805453 16979388 LY180_08575 Escherichia coli LY180 membrane protein YP_008564822.1 1804596 D 1335916 CDS YP_008564823.1 544390299 16979389 1805453..1807465 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fusaric acid resistance protein 1807465 16979389 LY180_08580 Escherichia coli LY180 fusaric acid resistance protein YP_008564823.1 1805453 D 1335916 CDS YP_008564824.1 544390300 16979390 complement(1807466..1808002) 1 NC_022364.1 SodC; copper and zinc binding; converts superoxide radicals to hydrogen peroxide and water; Derived by automated computational analysis using gene prediction method: Protein Homology.; superoxide dismutase 1808002 16979390 LY180_08585 Escherichia coli LY180 superoxide dismutase YP_008564824.1 1807466 R 1335916 CDS YP_008564825.1 544390301 16979391 complement(1808068..1808964) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase 1808964 16979391 LY180_08590 Escherichia coli LY180 oxidoreductase YP_008564825.1 1808068 R 1335916 CDS YP_008564826.1 544390302 16979392 complement(1809013..1809390) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1809390 16979392 LY180_08595 Escherichia coli LY180 hypothetical protein YP_008564826.1 1809013 R 1335916 CDS YP_008564827.1 544393003 16979393 1809439..1809954 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transcriptional regulator 1809954 16979393 LY180_08600 Escherichia coli LY180 transcriptional regulator YP_008564827.1 1809439 D 1335916 CDS YP_008564828.1 544390303 16979394 1809991..1811088 1 NC_022364.1 FMN-linked; catalyzes the formation of N-ethylsuccinimide from N-ethylmaleimide; Derived by automated computational analysis using gene prediction method: Protein Homology.; N-ethylmaleimide reductase 1811088 16979394 LY180_08605 Escherichia coli LY180 N-ethylmaleimide reductase YP_008564828.1 1809991 D 1335916 CDS YP_008564829.1 544390304 16979395 1811169..1811576 1 NC_022364.1 Ni-dependent; catalyzes the formation of S-lactoylglutathione from methylglyoxal and glutathione; Derived by automated computational analysis using gene prediction method: Protein Homology.; glyoxalase I 1811576 16979395 LY180_08610 Escherichia coli LY180 glyoxalase I YP_008564829.1 1811169 D 1335916 CDS YP_008564830.1 544390305 16979396 1811679..1812326 1 NC_022364.1 Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A); Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonuclease T 1812326 16979396 LY180_08615 Escherichia coli LY180 ribonuclease T YP_008564830.1 1811679 D 1335916 CDS YP_008564831.1 544390306 16982286 complement(1817086..1817433) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glutaredoxin 1817433 16982286 LY180_08620 Escherichia coli LY180 glutaredoxin YP_008564831.1 1817086 R 1335916 CDS YP_008564832.1 544390307 16979398 1817768..1818583 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; endopeptidase 1818583 16979398 LY180_08625 Escherichia coli LY180 endopeptidase YP_008564832.1 1817768 D 1335916 CDS YP_008564833.1 544390308 16979399 1818711..1819292 1 NC_022364.1 SodB; iron binding; present under aerobic and anaerobic conditions; destroys free radicals; Derived by automated computational analysis using gene prediction method: Protein Homology.; superoxide dismutase 1819292 16979399 LY180_08630 Escherichia coli LY180 superoxide dismutase YP_008564833.1 1818711 D 1335916 CDS YP_008564834.1 544390309 16979400 complement(1819527..1820696) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; MFS transporter 1820696 16979400 LY180_08635 Escherichia coli LY180 MFS transporter YP_008564834.1 1819527 R 1335916 CDS YP_008564835.1 544393004 16979401 complement(1820862..1820951) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1820951 16979401 LY180_08640 Escherichia coli LY180 hypothetical protein YP_008564835.1 1820862 R 1335916 CDS YP_008564836.1 544390310 16979402 1821250..1822275 1 NC_022364.1 binds to the purF operator and coregulates other genes for de novo purine nucleotide synthesis; is involved in regulation of purB, purC, purEK, purHD, purL, purMN and guaBA expression; binds hypoxanthine and guanine as inducers; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 1822275 16979402 LY180_08645 Escherichia coli LY180 transcriptional regulator YP_008564836.1 1821250 D 1335916 CDS YP_008564837.1 544390311 16979403 complement(1822272..1823204) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LysR family transcripitonal regulator 1823204 16979403 LY180_08650 Escherichia coli LY180 LysR family transcripitonal regulator YP_008564837.1 1822272 R 1335916 CDS YP_008564838.1 544390312 16979404 1823317..1824528 1 NC_022364.1 uncharacterized member of the major facilitator superfamily (MFS); Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 1824528 16979404 LY180_08655 Escherichia coli LY180 transporter YP_008564838.1 1823317 D 1335916 CDS YP_008564839.1 544390313 16979405 1824819..1825967 1 NC_022364.1 catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge; Derived by automated computational analysis using gene prediction method: Protein Homology.; cyclopropane fatty acyl phospholipid synthase 1825967 16979405 LY180_08660 Escherichia coli LY180 cyclopropane fatty acyl phospholipid synthase YP_008564839.1 1824819 D 1335916 CDS YP_008564840.1 544390314 16979406 complement(1826007..1826648) 1 NC_022364.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; Derived by automated computational analysis using gene prediction method: Protein Homology.; riboflavin synthase subunit alpha 1826648 16979406 LY180_08665 Escherichia coli LY180 riboflavin synthase subunit alpha YP_008564840.1 1826007 R 1335916 CDS YP_008564841.1 544390315 16979407 1826863..1828236 1 NC_022364.1 NorM; MdtK; functions as a Na(+)/drug antiporter; inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones; Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug transporter 1828236 16979407 LY180_08670 Escherichia coli LY180 multidrug transporter YP_008564841.1 1826863 D 1335916 CDS YP_008564842.1 544390316 16979408 complement(1828277..1829533) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1829533 16979408 LY180_08675 Escherichia coli LY180 hypothetical protein YP_008564842.1 1828277 R 1335916 CDS YP_008564843.1 544390317 16979411 1830106..1830411 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; monooxygenase 1830411 16979411 LY180_08690 Escherichia coli LY180 monooxygenase YP_008564843.1 1830106 D 1335916 CDS YP_008564844.1 544390318 16979412 1830537..1832141 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1832141 16979412 LY180_08695 Escherichia coli LY180 hypothetical protein YP_008564844.1 1830537 D 1335916 CDS YP_008564845.1 544390319 16979413 complement(1832153..1832965) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1832965 16979413 LY180_08700 Escherichia coli LY180 hypothetical protein YP_008564845.1 1832153 R 1335916 CDS YP_008564846.1 544390320 16979414 complement(1832969..1833754) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; thiosulfate reductase cytochrome B 1833754 16979414 LY180_08705 Escherichia coli LY180 thiosulfate reductase cytochrome B YP_008564846.1 1832969 R 1335916 CDS YP_008564847.1 544390321 16979415 complement(1833751..1834470) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ferredoxin 1834470 16979415 LY180_08710 Escherichia coli LY180 ferredoxin YP_008564847.1 1833751 R 1335916 CDS YP_008564848.1 544390322 16979416 complement(1834483..1835130) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1835130 16979416 LY180_08715 Escherichia coli LY180 hypothetical protein YP_008564848.1 1834483 R 1335916 CDS YP_008564849.1 544390323 16979417 complement(1835134..1837236) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase 1837236 16979417 LY180_08720 Escherichia coli LY180 oxidoreductase YP_008564849.1 1835134 R 1335916 CDS YP_008564850.1 544390324 16979418 complement(1837257..1837883) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1837883 16979418 LY180_08725 Escherichia coli LY180 hypothetical protein YP_008564850.1 1837257 R 1335916 CDS YP_008564851.1 544390325 16979419 complement(1838339..1838548) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1838548 16979419 LY180_08730 Escherichia coli LY180 hypothetical protein YP_008564851.1 1838339 R 1335916 CDS YP_008564852.1 544390326 16979420 1839105..1840517 1 NC_022364.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology.; pyruvate kinase 1840517 16979420 LY180_08735 Escherichia coli LY180 pyruvate kinase YP_008564852.1 1839105 D 1335916 CDS YP_008564853.1 544390327 16979421 1840828..1841064 1 NC_022364.1 major outer membrane lipoprotein; interacts with peptidoglycan to maintain the integrity of the cell envelope; Derived by automated computational analysis using gene prediction method: Protein Homology.; murein lipoprotein 1841064 16979421 LY180_08740 Escherichia coli LY180 murein lipoprotein YP_008564853.1 1840828 D 1335916 CDS YP_008564854.1 544390328 16979422 complement(1841128..1842132) 1 NC_022364.1 catalyzes the formation of a meso-diaminopimelyl-3-a meso-diaminopimelyl-3 cross-link in peptidoglycan synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; murein L,D-transpeptidase 1842132 16979422 LY180_08745 Escherichia coli LY180 murein L,D-transpeptidase YP_008564854.1 1841128 R 1335916 CDS YP_008564855.1 544390329 16979423 complement(1842281..1842697) 1 NC_022364.1 Acts with SufS to catalyze the formation of L-alanine from L-cysteine; Derived by automated computational analysis using gene prediction method: Protein Homology.; cysteine desufuration protein SufE 1842697 16979423 LY180_08750 Escherichia coli LY180 cysteine desufuration protein SufE YP_008564855.1 1842281 R 1335916 CDS YP_008564856.1 544390330 16979424 complement(1842710..1843930) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional cysteine desulfurase/selenocysteine lyase 1843930 16979424 LY180_08755 Escherichia coli LY180 bifunctional cysteine desulfurase/selenocysteine lyase YP_008564856.1 1842710 R 1335916 CDS YP_008564857.1 544390331 16979425 complement(1843927..1845198) 1 NC_022364.1 with SufBC activates cysteine desulfurase SufS; Derived by automated computational analysis using gene prediction method: Protein Homology.; cysteine desulfurase activator complex subunit SufD 1845198 16979425 LY180_08760 Escherichia coli LY180 cysteine desulfurase activator complex subunit SufD YP_008564857.1 1843927 R 1335916 CDS YP_008564858.1 544390332 16979426 complement(1845173..1845919) 1 NC_022364.1 part of SUF system involved in inserting iron-sulfur clusters into proteins; in Escherichia coli this protein forms a complex with SufBD; the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE; Derived by automated computational analysis using gene prediction method: Protein Homology.; cysteine desulfurase 1845919 sufC 16979426 sufC Escherichia coli LY180 cysteine desulfurase YP_008564858.1 1845173 R 1335916 CDS YP_008564859.1 544390333 16979427 complement(1845929..1847416) 1 NC_022364.1 with SufCD activates cysteine desulfurase SufS; Derived by automated computational analysis using gene prediction method: Protein Homology.; cysteine desulfurase activator complex subunit SufB 1847416 16979427 LY180_08770 Escherichia coli LY180 cysteine desulfurase activator complex subunit SufB YP_008564859.1 1845929 R 1335916 CDS YP_008564860.1 544390334 16979428 complement(1847425..1847793) 1 NC_022364.1 functions as a scaffold on which iron-sulfur clusters ([2Fe-2S]; [4Fe-4S]) are assembled; forms a homodimer; similar to IscA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; iron-sulfur cluster assembly scaffold protein 1847793 sufA 16979428 sufA Escherichia coli LY180 iron-sulfur cluster assembly scaffold protein YP_008564860.1 1847425 R 1335916 CDS YP_008564861.1 544393005 16979429 complement(1848341..1848610) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1848610 16979429 LY180_08780 Escherichia coli LY180 hypothetical protein YP_008564861.1 1848341 R 1335916 CDS YP_008564862.1 544390335 16979430 complement(1848629..1849039) 1 NC_022364.1 required for efficient enterobactin production; Derived by automated computational analysis using gene prediction method: Protein Homology.; acyl-CoA esterase 1849039 16979430 LY180_08785 Escherichia coli LY180 acyl-CoA esterase YP_008564862.1 1848629 R 1335916 CDS YP_008564863.1 544390336 16979431 complement(1849036..1852092) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1852092 16979431 LY180_08790 Escherichia coli LY180 membrane protein YP_008564863.1 1849036 R 1335916 CDS YP_008564864.1 544390337 16979432 1852481..1853593 1 NC_022364.1 YdiK; inner membrane protein; ydiK promoter presents a PurR sequence, suggesting that its expression is purine-regulated; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1853593 16979432 LY180_08795 Escherichia coli LY180 membrane protein YP_008564864.1 1852481 D 1335916 CDS YP_008564865.1 544390338 16979433 1854022..1854378 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1854378 16979433 LY180_08800 Escherichia coli LY180 hypothetical protein YP_008564865.1 1854022 D 1335916 CDS YP_008564866.1 544390339 16979434 1854478..1855692 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 1855692 16979434 LY180_08805 Escherichia coli LY180 transporter YP_008564866.1 1854478 D 1335916 CDS YP_008564867.1 544390340 16979435 1855919..1857184 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 1857184 16979435 LY180_08810 Escherichia coli LY180 transporter YP_008564867.1 1855919 D 1335916 CDS YP_008564868.1 544390341 16979436 1857196..1858062 1 NC_022364.1 YdiB; quinate/shikimate dehydrogenase from Escherichia coli uses both NAD and NAD(P) to convert quinate and shikimate to 3-dehydroquinate and 3-dehydroshikimate; Derived by automated computational analysis using gene prediction method: Protein Homology.; shikimate 5-dehydrogenase 1858062 16979436 LY180_08815 Escherichia coli LY180 shikimate 5-dehydrogenase YP_008564868.1 1857196 D 1335916 CDS YP_008564869.1 544390342 16979437 1858093..1858851 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-dehydroquinate dehydratase 1858851 16979437 LY180_08820 Escherichia coli LY180 3-dehydroquinate dehydratase YP_008564869.1 1858093 D 1335916 CDS YP_008564870.1 544390343 16979438 1858995..1860590 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1860590 16979438 LY180_08825 Escherichia coli LY180 hypothetical protein YP_008564870.1 1858995 D 1335916 CDS YP_008564871.1 544390344 16979439 1860604..1861755 1 NC_022364.1 may play a role in electron transport between the anaerobic fatty acid oxidation pathway and the respiratory chain; Derived by automated computational analysis using gene prediction method: Protein Homology.; acyl-CoA dehydrogenase 1861755 16979439 LY180_08830 Escherichia coli LY180 acyl-CoA dehydrogenase YP_008564871.1 1860604 D 1335916 CDS YP_008564872.1 544390345 16979440 complement(1861798..1862709) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; AraC family transcriptional regulator 1862709 16979440 LY180_08835 Escherichia coli LY180 AraC family transcriptional regulator YP_008564872.1 1861798 R 1335916 CDS YP_008564873.1 544390346 16979441 1863025..1863789 1 NC_022364.1 required for anaerobic carnitine reduction, may act to transfer electrons to crotonobetaine reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.; electron transfer flavoprotein FixB 1863789 16979441 LY180_08840 Escherichia coli LY180 electron transfer flavoprotein FixB YP_008564873.1 1863025 D 1335916 CDS YP_008564874.1 544390347 16979442 1863809..1864747 1 NC_022364.1 involved in electron transfer during carnitine metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.; electron transfer flavoprotein subunit alpha 1864747 fixB 16979442 fixB Escherichia coli LY180 electron transfer flavoprotein subunit alpha YP_008564874.1 1863809 D 1335916 CDS YP_008564875.1 544390348 16979443 1864803..1866092 1 NC_022364.1 FAD/NAD(P)-binding domain; possibly part of an electron transfer system required for anaerobic carnitine reduction; Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase FixC 1866092 16979443 LY180_08850 Escherichia coli LY180 oxidoreductase FixC YP_008564875.1 1864803 D 1335916 CDS YP_008564876.1 544390349 16979444 1866089..1866382 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ferredoxin ydiT 1866382 16979444 LY180_08855 Escherichia coli LY180 ferredoxin ydiT YP_008564876.1 1866089 D 1335916 CDS YP_008564877.1 544390350 16979445 1866439..1868082 1 NC_022364.1 acts in anaerobic beta-oxidation of fatty acids; possible ligase/synthase involved in anaerobic growth on fatty acids; Derived by automated computational analysis using gene prediction method: Protein Homology.; short chain acyl-CoA synthetase 1868082 16979445 LY180_08860 Escherichia coli LY180 short chain acyl-CoA synthetase YP_008564877.1 1866439 D 1335916 CDS YP_008564878.1 544390351 16979446 complement(1868139..1870517) 1 NC_022364.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoenolpyruvate synthase 1870517 16979446 LY180_08865 Escherichia coli LY180 phosphoenolpyruvate synthase YP_008564878.1 1868139 R 1335916 CDS YP_008564879.1 544390352 16979447 1870850..1871683 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; PEP synthetase regulatory protein 1871683 16979447 LY180_08870 Escherichia coli LY180 PEP synthetase regulatory protein YP_008564879.1 1870850 D 1335916 CDS YP_008564880.1 544390353 16979448 1871840..1872886 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phospho-2-dehydro-3-deoxyheptonate aldolase 1872886 16979448 LY180_08875 Escherichia coli LY180 phospho-2-dehydro-3-deoxyheptonate aldolase YP_008564880.1 1871840 D 1335916 CDS YP_008564881.1 544390354 16979449 1873018..1873209 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1873209 16979449 LY180_08880 Escherichia coli LY180 hypothetical protein YP_008564881.1 1873018 D 1335916 CDS YP_008564882.1 544390355 16979450 complement(1873213..1874649) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1874649 16979450 LY180_08885 Escherichia coli LY180 hypothetical protein YP_008564882.1 1873213 R 1335916 CDS YP_008564883.1 544390356 16979451 complement(1875672..1876136) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; endopeptidase 1876136 16979451 LY180_08890 Escherichia coli LY180 endopeptidase YP_008564883.1 1875672 R 1335916 CDS YP_008564884.1 544390357 16979452 complement(1876214..1876963) 1 NC_022364.1 ATP-binding protein that acts with the transmembrane protein BtuC and the solute binding protein BtuF to transport vitamin B12 into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; vitamin B12-transporter ATPase 1876963 16979452 LY180_08895 Escherichia coli LY180 vitamin B12-transporter ATPase YP_008564884.1 1876214 R 1335916 CDS YP_008564885.1 544390358 16979453 complement(1876963..1877514) 1 NC_022364.1 similar to glutathione peroxidase; member of the btuCED operon which is required for vitamin B12 transport across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutathione peroxidase 1877514 btuE 16979453 btuE Escherichia coli LY180 glutathione peroxidase YP_008564885.1 1876963 R 1335916 CDS YP_008564886.1 544390359 16979454 complement(1877577..1878557) 1 NC_022364.1 with BtuD and BtuF transports vitamin B12 into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; vtamin B12-transporter permease 1878557 16979454 LY180_08905 Escherichia coli LY180 vtamin B12-transporter permease YP_008564886.1 1877577 R 1335916 CDS YP_008564887.1 544390360 16979455 complement(1878658..1878957) 1 NC_022364.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; Derived by automated computational analysis using gene prediction method: Protein Homology.; integration host factor subunit alpha 1878957 ihfA 16979455 ihfA Escherichia coli LY180 integration host factor subunit alpha YP_008564887.1 1878658 R 1335916 CDS YP_008564888.1 544390361 16979456 complement(1878962..1881349) 1 NC_022364.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; Derived by automated computational analysis using gene prediction method: Protein Homology.; phenylalanyl-tRNA synthetase 1881349 pheT 16979456 pheT Escherichia coli LY180 phenylalanyl-tRNA synthetase YP_008564888.1 1878962 R 1335916 CDS YP_008564889.1 544390362 16979457 complement(1881364..1882347) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phenylalanyl-tRNA synthetase 1882347 16979457 LY180_08920 Escherichia coli LY180 phenylalanyl-tRNA synthetase YP_008564889.1 1881364 R 1335916 CDS YP_008564890.1 544390363 16979458 complement(1882797..1883153) 1 NC_022364.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L20 1883153 rplT 16979458 rplT Escherichia coli LY180 50S ribosomal protein L20 YP_008564890.1 1882797 R 1335916 CDS YP_008564891.1 544390364 16979459 complement(1883206..1883403) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L35 1883403 16979459 LY180_08930 Escherichia coli LY180 50S ribosomal protein L35 YP_008564891.1 1883206 R 1335916 CDS YP_008564892.1 544393006 16979460 complement(1883500..1883841) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; translation initiation factor IF-3 1883841 16979460 LY180_08935 Escherichia coli LY180 translation initiation factor IF-3 YP_008564892.1 1883500 R 1335916 CDS YP_008564893.1 544390365 16979461 complement(1884046..1885974) 1 NC_022364.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); Derived by automated computational analysis using gene prediction method: Protein Homology.; threonyl-tRNA synthetase 1885974 thrS 16979461 thrS Escherichia coli LY180 threonyl-tRNA synthetase YP_008564893.1 1884046 R 1335916 CDS YP_008564894.1 544393007 16979462 1886498..1887613 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1887613 16979462 LY180_08945 Escherichia coli LY180 hypothetical protein YP_008564894.1 1886498 D 1335916 CDS YP_008564895.1 544393008 16979463 1887716..1888396 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; ankyrin 1888396 16979463 LY180_08950 Escherichia coli LY180 ankyrin YP_008564895.1 1887716 D 1335916 CDS YP_008564896.1 544393009 16979464 1888466..1889674 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1889674 16979464 LY180_08955 Escherichia coli LY180 hypothetical protein YP_008564896.1 1888466 D 1335916 CDS YP_008564897.1 544393010 16979465 1889910..1890017 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1890017 16979465 LY180_08960 Escherichia coli LY180 hypothetical protein YP_008564897.1 1889910 D 1335916 CDS YP_008564898.1 544390366 16979466 complement(1890070..1890828) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1890828 16979466 LY180_08965 Escherichia coli LY180 membrane protein YP_008564898.1 1890070 R 1335916 CDS YP_008564899.1 544390367 16979467 1891115..1892044 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 6-phosphofructokinase 1892044 16979467 LY180_08970 Escherichia coli LY180 6-phosphofructokinase YP_008564899.1 1891115 D 1335916 CDS YP_008564900.1 544390368 16979468 1892145..1892435 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1892435 16979468 LY180_08975 Escherichia coli LY180 hypothetical protein YP_008564900.1 1892145 D 1335916 CDS YP_008564901.1 544390369 16979469 1892541..1893401 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1893401 16979469 LY180_08980 Escherichia coli LY180 hypothetical protein YP_008564901.1 1892541 D 1335916 CDS YP_008564902.1 544390370 16979470 complement(1893442..1893978) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1893978 16979470 LY180_08985 Escherichia coli LY180 membrane protein YP_008564902.1 1893442 R 1335916 CDS YP_008564903.1 544390371 16979471 1894125..1894793 1 NC_022364.1 YniC; catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate, mannose 6-phosphate and p-nitrophenyl phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-deoxyglucose-6-phosphatase 1894793 16979471 LY180_08990 Escherichia coli LY180 2-deoxyglucose-6-phosphatase YP_008564903.1 1894125 D 1335916 CDS YP_008564904.1 544390372 16979472 1894956..1895546 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1895546 16979472 LY180_08995 Escherichia coli LY180 membrane protein YP_008564904.1 1894956 D 1335916 CDS YP_008564905.1 544390373 16979473 1895679..1897070 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; L-cystine transporter tcyP 1897070 16979473 LY180_09000 Escherichia coli LY180 L-cystine transporter tcyP YP_008564905.1 1895679 D 1335916 CDS YP_008564906.1 544390374 16979475 complement(1898166..1898408) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division modulator 1898408 16979475 LY180_09010 Escherichia coli LY180 cell division modulator YP_008564906.1 1898166 R 1335916 CDS YP_008564907.1 544390375 16979476 1898612..1900873 1 NC_022364.1 Catalase HPII; monofunctional catalase that decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide; Derived by automated computational analysis using gene prediction method: Protein Homology.; hydroperoxidase II 1900873 katE 16979476 katE Escherichia coli LY180 hydroperoxidase II YP_008564907.1 1898612 D 1335916 CDS YP_008564908.1 544390376 16979477 complement(1900920..1901678) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1901678 16979477 LY180_09020 Escherichia coli LY180 hypothetical protein YP_008564908.1 1900920 R 1335916 CDS YP_008564909.1 544390377 16979478 complement(1901691..1903043) 1 NC_022364.1 catalyzes the fromation of N-acetyl-D-glucosamine and N-acetyl-D-glucosamine-6-phosphate from diacetylchitobiose-6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; diacetylchitobiose-6-phosphate hydrolase 1903043 16979478 LY180_09025 Escherichia coli LY180 diacetylchitobiose-6-phosphate hydrolase YP_008564909.1 1901691 R 1335916 CDS YP_008564910.1 544390378 16979479 complement(1903147..1903989) 1 NC_022364.1 represses the celABCDF-ydjC operon involved in carbon uptake; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 1903989 16979479 LY180_09030 Escherichia coli LY180 transcriptional regulator YP_008564910.1 1903147 R 1335916 CDS YP_008564911.1 544390379 16979480 complement(1903997..1904347) 1 NC_022364.1 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; involved N,N'-diacetylchitobiose transport; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS N'-diacetylchitobiose transporter subunit IIA 1904347 16979480 LY180_09035 Escherichia coli LY180 PTS N'-diacetylchitobiose transporter subunit IIA YP_008564911.1 1903997 R 1335916 CDS YP_008564912.1 544390380 16979481 complement(1904398..1905756) 1 NC_022364.1 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; involved in N,N'-diacetylchitobiose transport; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS N'-diacetylchitobiose transporter subunit IIC 1905756 16979481 LY180_09040 Escherichia coli LY180 PTS N'-diacetylchitobiose transporter subunit IIC YP_008564912.1 1904398 R 1335916 CDS YP_008564913.1 544390381 16979482 complement(1905841..1906161) 1 NC_022364.1 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; involved in N,N'-diacetylchitobiose transport; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS N'-diacetylchitobiose transporter subunit IIB 1906161 16979482 LY180_09045 Escherichia coli LY180 PTS N'-diacetylchitobiose transporter subunit IIB YP_008564913.1 1905841 R 1335916 CDS YP_008564914.1 544390382 16979483 complement(1906460..1906798) 1 NC_022364.1 osmotically-inducible lipoprotein E; activator of ntr-like gene protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 1906798 16979483 LY180_09050 Escherichia coli LY180 transcriptional regulator YP_008564914.1 1906460 R 1335916 CDS YP_008564915.1 544390383 16979484 1907000..1907827 1 NC_022364.1 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; Derived by automated computational analysis using gene prediction method: Protein Homology.; NAD synthetase 1907827 nadE 16979484 nadE Escherichia coli LY180 NAD synthetase YP_008564915.1 1907000 D 1335916 CDS YP_008564916.1 544390384 16979485 1908057..1908944 1 NC_022364.1 3' incision activity; acts with UvrC; Derived by automated computational analysis using gene prediction method: Protein Homology.; nucleotide excision repair endonuclease 1908944 16979485 LY180_09065 Escherichia coli LY180 nucleotide excision repair endonuclease YP_008564916.1 1908057 D 1335916 CDS YP_008564917.1 544390385 16979486 complement(1908904..1909479) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1909479 16979486 LY180_09070 Escherichia coli LY180 hypothetical protein YP_008564917.1 1908904 R 1335916 CDS YP_008564918.1 544390386 16979487 complement(1909682..1910167) 1 NC_022364.1 periplasmic protein induced by stress response via Cpx and BaeSR system; similar to CpxP; Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1910167 16979487 LY180_09075 Escherichia coli LY180 hypothetical protein YP_008564918.1 1909682 R 1335916 CDS YP_008564919.1 544390387 16979488 complement(1910497..1911465) 1 NC_022364.1 catalyzes the formation of succinate and glutamate from N(2)-succinylglutamate in arginine catabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.; succinylglutamate desuccinylase 1911465 16979488 LY180_09080 Escherichia coli LY180 succinylglutamate desuccinylase YP_008564919.1 1910497 R 1335916 CDS YP_008564920.1 544390388 16979489 complement(1911458..1912801) 1 NC_022364.1 catalyzes the hydrolysis of 2-N-succinylarginine into 2-N-succinylornithine, ammonia and carbon dioxide in arginine degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.; succinylarginine dihydrolase 1912801 16979489 LY180_09085 Escherichia coli LY180 succinylarginine dihydrolase YP_008564920.1 1911458 R 1335916 CDS YP_008564921.1 544390389 16979490 complement(1912798..1914276) 1 NC_022364.1 a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity; converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH; Derived by automated computational analysis using gene prediction method: Protein Homology.; succinylglutamate-semialdehyde dehydrogenase 1914276 astD 16979490 astD Escherichia coli LY180 succinylglutamate-semialdehyde dehydrogenase YP_008564921.1 1912798 R 1335916 CDS YP_008564922.1 544390390 16979491 complement(1914273..1915307) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; arginine succinyltransferase 1915307 16979491 LY180_09095 Escherichia coli LY180 arginine succinyltransferase YP_008564922.1 1914273 R 1335916 CDS YP_008564923.1 544390391 16979492 complement(1915304..1916524) 1 NC_022364.1 catalyzes the transamination of 2-N-succinylornithine and alpha-ketoglutarate into 2-N-succinylglutamate semialdehyde and glutamate; also functions as the catabolic acetylornithine aminotransferase catalyzing the formation of 2-N-acetylglutamate semialdehyde and glutamate from 2-N-acetylornithine and alpha-ketoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.; acetylornithine aminotransferase 1916524 16979492 LY180_09100 Escherichia coli LY180 acetylornithine aminotransferase YP_008564923.1 1915304 R 1335916 CDS YP_008564924.1 544390392 16979493 1916970..1917776 1 NC_022364.1 removes the damaged DNA at cytosines and guanines by cleaving on the 3' side of the AP site by a beta-elimination reaction; Derived by automated computational analysis using gene prediction method: Protein Homology.; exonuclease III 1917776 16979493 LY180_09110 Escherichia coli LY180 exonuclease III YP_008564924.1 1916970 D 1335916 CDS YP_008564925.1 544390393 16979494 1917943..1918653 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1918653 16979494 LY180_09115 Escherichia coli LY180 membrane protein YP_008564925.1 1917943 D 1335916 CDS YP_008564926.1 544390394 16979495 1918658..1919335 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1919335 16979495 LY180_09120 Escherichia coli LY180 hypothetical protein YP_008564926.1 1918658 D 1335916 CDS YP_008564927.1 544390395 16979496 1919350..1920057 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; TVP38/TMEM64 family inner membrane protein ydjZ 1920057 16979496 LY180_09125 Escherichia coli LY180 TVP38/TMEM64 family inner membrane protein ydjZ YP_008564927.1 1919350 D 1335916 CDS YP_008564928.1 544390396 16979497 1920057..1920605 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1920605 16979497 LY180_09130 Escherichia coli LY180 hypothetical protein YP_008564928.1 1920057 D 1335916 CDS YP_008564929.1 544390397 16979498 1920615..1921781 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1921781 16979498 LY180_09135 Escherichia coli LY180 hypothetical protein YP_008564929.1 1920615 D 1335916 CDS YP_008564930.1 544390398 16979499 1921754..1923289 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; thiamine ABC transporter permease 1923289 16979499 LY180_09140 Escherichia coli LY180 thiamine ABC transporter permease YP_008564930.1 1921754 D 1335916 CDS YP_008564931.1 544393011 16979500 1923289..1923942 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; sulfate ABC transporter ATP-binding protein 1923942 16979500 LY180_09145 Escherichia coli LY180 sulfate ABC transporter ATP-binding protein YP_008564931.1 1923289 D 1335916 CDS YP_008564932.1 544390399 16979501 1924009..1925316 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; thiosulfate sulfurtransferase 1925316 16979501 LY180_09150 Escherichia coli LY180 thiosulfate sulfurtransferase YP_008564932.1 1924009 D 1335916 CDS YP_008564933.1 544390400 16979502 complement(1925325..1925945) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1925945 16979502 LY180_09155 Escherichia coli LY180 membrane protein YP_008564933.1 1925325 R 1335916 CDS YP_008564934.1 544390401 16979503 1926032..1926439 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase 1926439 16979503 LY180_09160 Escherichia coli LY180 pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase YP_008564934.1 1926032 D 1335916 CDS YP_008564935.1 544390402 16979504 complement(1926405..1926677) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1926677 16979504 LY180_09165 Escherichia coli LY180 hypothetical protein YP_008564935.1 1926405 R 1335916 CDS YP_008564936.1 544390403 16979505 1926913..1928256 1 NC_022364.1 converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutamate dehydrogenase 1928256 16979505 LY180_09170 Escherichia coli LY180 glutamate dehydrogenase YP_008564936.1 1926913 D 1335916 CDS YP_008564937.1 544390404 16979506 complement(1928373..1929413) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1929413 16979506 LY180_09175 Escherichia coli LY180 hypothetical protein YP_008564937.1 1928373 R 1335916 CDS YP_008564938.1 544390405 16979507 complement(1929541..1931502) 1 NC_022364.1 decatenates replicating daughter chromosomes; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA topoisomerase III 1931502 16979507 LY180_09180 Escherichia coli LY180 DNA topoisomerase III YP_008564938.1 1929541 R 1335916 CDS YP_008564939.1 544390406 16979508 complement(1931507..1932550) 1 NC_022364.1 catalyzes the formation of selenophosphate from selenide and ATP; Derived by automated computational analysis using gene prediction method: Protein Homology.; selenophosphate synthetase 1932550 16979508 LY180_09185 Escherichia coli LY180 selenophosphate synthetase YP_008564939.1 1931507 R 1335916 CDS YP_008564940.1 544390407 16979509 complement(1932667..1933218) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase 1933218 16979509 LY180_09190 Escherichia coli LY180 oxidoreductase YP_008564940.1 1932667 R 1335916 CDS YP_008564941.1 544390408 16979510 1933379..1935235 1 NC_022364.1 SppA; catalyzes the degradation of cleaved signal peptides; essential to maintain secretion of mature proteins across the membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; protease 1935235 16979510 LY180_09195 Escherichia coli LY180 protease YP_008564941.1 1933379 D 1335916 CDS YP_008564942.1 544390409 16979511 1935402..1936418 1 NC_022364.1 converts asparagine to aspartate and ammonia; Derived by automated computational analysis using gene prediction method: Protein Homology.; cytoplasmic asparaginase I 1936418 ansA 16979511 ansA Escherichia coli LY180 cytoplasmic asparaginase I YP_008564942.1 1935402 D 1335916 CDS YP_008564943.1 544390410 16979512 1936429..1937070 1 NC_022364.1 catalyzes the formation of nicotinate from nicotinamide in NAD biosynthesis and the formation of pyrazinoate from pyrazinamide; Derived by automated computational analysis using gene prediction method: Protein Homology.; nicotinamidase/pyrazinamidase 1937070 16979512 LY180_09205 Escherichia coli LY180 nicotinamidase/pyrazinamidase YP_008564943.1 1936429 D 1335916 CDS YP_008564944.1 544390411 16979513 complement(1937163..1938521) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; MFS transporter 1938521 16979513 LY180_09210 Escherichia coli LY180 MFS transporter YP_008564944.1 1937163 R 1335916 CDS YP_008564945.1 544390412 16979514 complement(1938638..1939396) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DeoR family transcriptional regulator 1939396 16979514 LY180_09215 Escherichia coli LY180 DeoR family transcriptional regulator YP_008564945.1 1938638 R 1335916 CDS YP_008564946.1 544390413 16979515 complement(1939533..1940513) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase 1940513 16979515 LY180_09220 Escherichia coli LY180 oxidoreductase YP_008564946.1 1939533 R 1335916 CDS YP_008564947.1 544390414 16979516 complement(1940523..1941470) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar kinase 1941470 16979516 LY180_09225 Escherichia coli LY180 sugar kinase YP_008564947.1 1940523 R 1335916 CDS YP_008564948.1 544390415 16979517 complement(1941475..1942311) 1 NC_022364.1 catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1,6-bisphosphate; in enteric bacteria there are two D-tagatose 1,6-bisphosphate-specific aldolases: KbaY (also called AgaY), involved in catabolism of N-acetyl-galactosamine and D-galactosamine, and GatY which is part of the galactitol catabolism pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.; fructose-bisphosphate aldolase 1942311 gatY 16979517 gatY Escherichia coli LY180 fructose-bisphosphate aldolase YP_008564948.1 1941475 R 1335916 CDS YP_008564949.1 544390416 16979518 complement(1942332..1943375) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; alcohol dehydrogenase 1943375 16979518 LY180_09235 Escherichia coli LY180 alcohol dehydrogenase YP_008564949.1 1942332 R 1335916 CDS YP_008564950.1 544390417 16979519 complement(1943392..1944771) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 1944771 16979519 LY180_09240 Escherichia coli LY180 transporter YP_008564950.1 1943392 R 1335916 CDS YP_008564951.1 544390418 16979520 complement(1944798..1945874) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; alcohol dehydrogenase 1945874 16979520 LY180_09245 Escherichia coli LY180 alcohol dehydrogenase YP_008564951.1 1944798 R 1335916 CDS YP_008564952.1 544390419 16979521 complement(1946244..1946516) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1946516 16979521 LY180_09250 Escherichia coli LY180 hypothetical protein YP_008564952.1 1946244 R 1335916 CDS YP_008564953.1 544390420 16979522 complement(1946558..1946971) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; methionine sulfoxide reductase B 1946971 16979522 LY180_09255 Escherichia coli LY180 methionine sulfoxide reductase B YP_008564953.1 1946558 R 1335916 CDS YP_008564954.1 544390421 16979523 1947313..1948308 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glyceraldehyde-3-phosphate dehydrogenase 1948308 16979523 LY180_09260 Escherichia coli LY180 glyceraldehyde-3-phosphate dehydrogenase YP_008564954.1 1947313 D 1335916 CDS YP_008564955.1 544390422 16979524 1948392..1949276 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glucose-6-phosphate 1-epimerase 1949276 16979524 LY180_09265 Escherichia coli LY180 glucose-6-phosphate 1-epimerase YP_008564955.1 1948392 D 1335916 CDS YP_008564956.1 544390423 16979525 complement(1949327..1950181) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1950181 16979525 LY180_09270 Escherichia coli LY180 hypothetical protein YP_008564956.1 1949327 R 1335916 CDS YP_008564957.1 544390424 16979526 complement(1950271..1951017) 1 NC_022364.1 scaffolding protein for the murein polymerase MrcB and the lytic transglycosylase MltA; Derived by automated computational analysis using gene prediction method: Protein Homology.; MltA-interacting protein MipA 1951017 16979526 LY180_09275 Escherichia coli LY180 MltA-interacting protein MipA YP_008564957.1 1950271 R 1335916 CDS YP_008564958.1 544390425 16979527 1951453..1953387 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; PrkA family serine protein kinase 1953387 16979527 LY180_09280 Escherichia coli LY180 PrkA family serine protein kinase YP_008564958.1 1951453 D 1335916 CDS YP_008564959.1 544390426 16979528 1953500..1954783 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1954783 16979528 LY180_09285 Escherichia coli LY180 hypothetical protein YP_008564959.1 1953500 D 1335916 CDS YP_008564960.1 544390427 16979529 1954930..1956405 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1956405 16979529 LY180_09290 Escherichia coli LY180 membrane protein YP_008564960.1 1954930 D 1335916 CDS YP_008564961.1 544390428 16979530 1956586..1958076 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; diguanylate cylase 1958076 16979530 LY180_09295 Escherichia coli LY180 diguanylate cylase YP_008564961.1 1956586 D 1335916 CDS YP_008564962.1 544390429 16979531 1958119..1958622 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1958622 16979531 LY180_09300 Escherichia coli LY180 hypothetical protein YP_008564962.1 1958119 D 1335916 CDS YP_008564963.1 544393012 16979532 complement(1958623..1958727) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1958727 16979532 LY180_09305 Escherichia coli LY180 hypothetical protein YP_008564963.1 1958623 R 1335916 CDS YP_008564964.1 544390430 16979533 1958897..1959343 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1959343 16979533 LY180_09310 Escherichia coli LY180 membrane protein YP_008564964.1 1958897 D 1335916 CDS YP_008564965.1 544390431 16979534 complement(1959300..1960121) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; AraC family transcriptional regulator 1960121 16979534 LY180_09315 Escherichia coli LY180 AraC family transcriptional regulator YP_008564965.1 1959300 R 1335916 CDS YP_008564966.1 544390432 16979535 1960218..1961399 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1961399 16979535 LY180_09320 Escherichia coli LY180 membrane protein YP_008564966.1 1960218 D 1335916 CDS YP_008564967.1 544390433 16979536 1961454..1961801 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1961801 16979536 LY180_09325 Escherichia coli LY180 hypothetical protein YP_008564967.1 1961454 D 1335916 CDS YP_008564968.1 544390434 16979537 complement(1961823..1962077) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1962077 16979537 LY180_09330 Escherichia coli LY180 hypothetical protein YP_008564968.1 1961823 R 1335916 CDS YP_008564969.1 544390435 16979538 1962260..1963285 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; diguanylate cyclase 1963285 16979538 LY180_09335 Escherichia coli LY180 diguanylate cyclase YP_008564969.1 1962260 D 1335916 CDS YP_008564970.1 544390436 16979539 complement(1963552..1963800) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1963800 16979539 LY180_09340 Escherichia coli LY180 membrane protein YP_008564970.1 1963552 R 1335916 CDS YP_008564971.1 544390437 16979540 complement(1964028..1965236) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transposase IS609 1965236 16979540 LY180_09345 Escherichia coli LY180 transposase IS609 YP_008564971.1 1964028 R 1335916 CDS YP_008564972.1 544390438 16979541 1965244..1965675 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transposase 1965675 16979541 LY180_09350 Escherichia coli LY180 transposase YP_008564972.1 1965244 D 1335916 CDS YP_008564973.1 544390439 16979542 complement(1965691..1965879) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1965879 16979542 LY180_09355 Escherichia coli LY180 hypothetical protein YP_008564973.1 1965691 R 1335916 CDS YP_008564974.1 544390440 16979543 complement(1965883..1966242) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1966242 16979543 LY180_09360 Escherichia coli LY180 hypothetical protein YP_008564974.1 1965883 R 1335916 CDS YP_008564975.1 544390441 16979544 complement(1966415..1967053) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; leucine export protein LeuE 1967053 16979544 LY180_09365 Escherichia coli LY180 leucine export protein LeuE YP_008564975.1 1966415 R 1335916 CDS YP_008564976.1 544390442 16979545 complement(1967180..1968124) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LysR family transcriptional regulator 1968124 16979545 LY180_09370 Escherichia coli LY180 LysR family transcriptional regulator YP_008564976.1 1967180 R 1335916 CDS YP_008564977.1 544390443 16979546 1968206..1969291 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tartrate dehydrogenase 1969291 16979546 LY180_09375 Escherichia coli LY180 tartrate dehydrogenase YP_008564977.1 1968206 D 1335916 CDS YP_008564978.1 544390444 16979547 1969542..1971152 1 NC_022364.1 member of the betaine, carnitine, choline transporter (BCCT) family; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.; betaine/carnitine/choline BCCT transporter 1971152 16979547 LY180_09380 Escherichia coli LY180 betaine/carnitine/choline BCCT transporter YP_008564978.1 1969542 D 1335916 CDS YP_008564979.1 544390445 16979548 1971184..1972308 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; dioxygenase 1972308 16979548 LY180_09385 Escherichia coli LY180 dioxygenase YP_008564979.1 1971184 D 1335916 CDS YP_008564980.1 544390446 16979549 1972364..1973329 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; dioxygenase subunit beta 1973329 16979549 LY180_09390 Escherichia coli LY180 dioxygenase subunit beta YP_008564980.1 1972364 D 1335916 CDS YP_008564981.1 544390447 16979550 complement(1973383..1974510) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonuclease D 1974510 16979550 LY180_09395 Escherichia coli LY180 ribonuclease D YP_008564981.1 1973383 R 1335916 CDS YP_008564982.1 544390448 16979551 complement(1974580..1976265) 1 NC_022364.1 Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology.; long-chain fatty acid--CoA ligase 1976265 16979551 LY180_09400 Escherichia coli LY180 long-chain fatty acid--CoA ligase YP_008564982.1 1974580 R 1335916 CDS YP_008564983.1 544390449 16979552 complement(1976470..1977051) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1977051 16979552 LY180_09405 Escherichia coli LY180 membrane protein YP_008564983.1 1976470 R 1335916 CDS YP_008564984.1 544390450 16979553 complement(1977091..1977786) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1977786 16979553 LY180_09410 Escherichia coli LY180 hypothetical protein YP_008564984.1 1977091 R 1335916 CDS YP_008564985.1 544390451 16979554 complement(1977844..1979754) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-dependent helicase 1979754 16979554 LY180_09415 Escherichia coli LY180 ATP-dependent helicase YP_008564985.1 1977844 R 1335916 CDS YP_008564986.1 544390452 16979555 1979886..1980230 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; endoribonuclease L-PSP 1980230 16979555 LY180_09420 Escherichia coli LY180 endoribonuclease L-PSP YP_008564986.1 1979886 D 1335916 CDS YP_008564987.1 544393013 16979556 1980653..1980952 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1980952 16979556 LY180_09425 Escherichia coli LY180 hypothetical protein YP_008564987.1 1980653 D 1335916 CDS YP_008564988.1 544390453 16979557 complement(1981072..1981251) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1981251 16979557 LY180_09430 Escherichia coli LY180 hypothetical protein YP_008564988.1 1981072 R 1335916 CDS YP_008564989.1 544390454 16979558 1981325..1982686 1 NC_022364.1 para-aminobenzoate synthase component 1; catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and L-glutamine; Derived by automated computational analysis using gene prediction method: Protein Homology.; aminodeoxychorismate synthase subunit I 1982686 pabB 16979558 pabB Escherichia coli LY180 aminodeoxychorismate synthase subunit I YP_008564989.1 1981325 D 1335916 CDS YP_008564990.1 544390455 16979559 1982690..1983268 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; NUDIX hydrolase 1983268 16979559 LY180_09440 Escherichia coli LY180 NUDIX hydrolase YP_008564990.1 1982690 D 1335916 CDS YP_008564991.1 544390456 16979560 1983452..1984816 1 NC_022364.1 catalyzes the formation of pyruvate from serine; Derived by automated computational analysis using gene prediction method: Protein Homology.; L-serine dehydratase 1984816 16979560 LY180_09445 Escherichia coli LY180 L-serine dehydratase YP_008564991.1 1983452 D 1335916 CDS YP_008564992.1 544390457 16979561 1984947..1986545 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cyclic di-GMP phosphodiesterase 1986545 16979561 LY180_09450 Escherichia coli LY180 cyclic di-GMP phosphodiesterase YP_008564992.1 1984947 D 1335916 CDS YP_008564993.1 544390458 16979562 complement(1986549..1988105) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1988105 16979562 LY180_09455 Escherichia coli LY180 membrane protein YP_008564993.1 1986549 R 1335916 CDS YP_008564994.1 544390459 16979563 1988568..1989539 1 NC_022364.1 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; subunit IIA transfers a phosphoryl group to subunit IIB; subunit IIB transfers the phosphoryl group to the substrate; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS mannose transporter subunit IIAB 1989539 16979563 LY180_09460 Escherichia coli LY180 PTS mannose transporter subunit IIAB YP_008564994.1 1988568 D 1335916 CDS YP_008564995.1 544390460 16979564 1989602..1990402 1 NC_022364.1 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS mannose transporter subunit IIC 1990402 16979564 LY180_09465 Escherichia coli LY180 PTS mannose transporter subunit IIC YP_008564995.1 1989602 D 1335916 CDS YP_008564996.1 544390461 16979565 1990415..1991266 1 NC_022364.1 hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IID with IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS mannose transporter subunit IID 1991266 16979565 LY180_09470 Escherichia coli LY180 PTS mannose transporter subunit IID YP_008564996.1 1990415 D 1335916 CDS YP_008564997.1 544390462 16979566 1991321..1991779 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1991779 16979566 LY180_09475 Escherichia coli LY180 membrane protein YP_008564997.1 1991321 D 1335916 CDS YP_008564998.1 544390463 16979567 1992208..1992774 1 NC_022364.1 membrane protein YebN; Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1992774 16979567 LY180_09480 Escherichia coli LY180 membrane protein YP_008564998.1 1992208 D 1335916 CDS YP_008564999.1 544390464 16979568 complement(1992771..1993580) 1 NC_022364.1 methylates the guanosine in position 745 of 23S rRNA; required for translation and cell growth; Derived by automated computational analysis using gene prediction method: Protein Homology.; 23S rRNA methyltransferase 1993580 rrmA 16979568 rrmA Escherichia coli LY180 23S rRNA methyltransferase YP_008564999.1 1992771 R 1335916 CDS YP_008565000.1 544390465 16979569 complement(1993746..1993955) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; RNA chaperone/anti-terminator 1993955 16979569 LY180_09490 Escherichia coli LY180 RNA chaperone/anti-terminator YP_008565000.1 1993746 R 1335916 CDS YP_008565001.1 544390466 16979570 complement(1993968..1994111) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1994111 16979570 LY180_09495 Escherichia coli LY180 hypothetical protein YP_008565001.1 1993968 R 1335916 CDS YP_008565002.1 544390467 16979571 complement(1994781..1995068) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1995068 16979571 LY180_09500 Escherichia coli LY180 hypothetical protein YP_008565002.1 1994781 R 1335916 CDS YP_008565003.1 544390468 16979572 complement(1995143..1995286) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; PhoPQ regulatory protein 1995286 16979572 LY180_09505 Escherichia coli LY180 PhoPQ regulatory protein YP_008565003.1 1995143 R 1335916 CDS YP_008565004.1 544390469 16979573 complement(1995827..1996618) 1 NC_022364.1 regulates the genes involved in 2-keto-3-deoxy gluconate transport and catabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 1996618 16979573 LY180_09510 Escherichia coli LY180 transcriptional regulator YP_008565004.1 1995827 R 1335916 CDS YP_008565005.1 544390470 16979574 1996795..1998168 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug MFS transporter 1998168 16979574 LY180_09515 Escherichia coli LY180 multidrug MFS transporter YP_008565005.1 1996795 D 1335916 CDS YP_008565006.1 544390471 16979575 complement(1998214..1999095) 1 NC_022364.1 metalloprotease; Derived by automated computational analysis using gene prediction method: Protein Homology.; heat shock protein HtpX 1999095 16979575 LY180_09520 Escherichia coli LY180 heat shock protein HtpX YP_008565006.1 1998214 R 1335916 CDS YP_008565007.1 544390472 16979576 complement(1999287..2001335) 1 NC_022364.1 Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology.; carboxy-terminal protease 2001335 16979576 LY180_09525 Escherichia coli LY180 carboxy-terminal protease YP_008565007.1 1999287 R 1335916 CDS YP_008565008.1 544390473 16979577 complement(2001355..2002053) 1 NC_022364.1 affects solute and DNA transport through an unknown mechanism; Derived by automated computational analysis using gene prediction method: Protein Homology.; prop expression regulator 2002053 16979577 LY180_09530 Escherichia coli LY180 prop expression regulator YP_008565008.1 2001355 R 1335916 CDS YP_008565009.1 544390474 16979578 complement(2002150..2002647) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Free methionine-R-sulfoxide reductase 2002647 16979578 LY180_09535 Escherichia coli LY180 Free methionine-R-sulfoxide reductase YP_008565009.1 2002150 R 1335916 CDS YP_008565010.1 544390475 16979579 2002777..2004060 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2004060 16979579 LY180_09540 Escherichia coli LY180 membrane protein YP_008565010.1 2002777 D 1335916 CDS YP_008565011.1 544390476 16979580 2004029..2006662 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2006662 16979580 LY180_09545 Escherichia coli LY180 hypothetical protein YP_008565011.1 2004029 D 1335916 CDS YP_008565012.1 544390477 16979581 2006736..2008181 1 NC_022364.1 in Escherichia coli this enzyme specifically methylates C1407 of the 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; rRNA methyltransferase 2008181 yebU 16979581 yebU Escherichia coli LY180 rRNA methyltransferase YP_008565012.1 2006736 D 1335916 CDS YP_008565013.1 544390478 16979582 2008299..2008535 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2008535 16979582 LY180_09555 Escherichia coli LY180 hypothetical protein YP_008565013.1 2008299 D 1335916 CDS YP_008565014.1 544393014 16979583 2008556..2008831 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2008831 16979583 LY180_09560 Escherichia coli LY180 hypothetical protein YP_008565014.1 2008556 D 1335916 CDS YP_008565015.1 544390479 16979584 complement(2008832..2009488) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; serine/threonine protein phosphatase 2009488 16979584 LY180_09565 Escherichia coli LY180 serine/threonine protein phosphatase YP_008565015.1 2008832 R 1335916 CDS YP_008565016.1 544390480 16979585 complement(2009884..2010225) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2010225 16979585 LY180_09570 Escherichia coli LY180 hypothetical protein YP_008565016.1 2009884 R 1335916 CDS YP_008565017.1 544390481 16979586 complement(2010238..2011110) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2011110 16979586 LY180_09575 Escherichia coli LY180 membrane protein YP_008565017.1 2010238 R 1335916 CDS YP_008565018.1 544390482 16979587 complement(2011114..2011488) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2011488 16979587 LY180_09580 Escherichia coli LY180 hypothetical protein YP_008565018.1 2011114 R 1335916 CDS YP_008565019.1 544390483 16979588 2011627..2011857 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA polymerase III subunit theta 2011857 16979588 LY180_09585 Escherichia coli LY180 DNA polymerase III subunit theta YP_008565019.1 2011627 D 1335916 CDS YP_008565020.1 544390484 16979589 2011959..2012615 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2012615 16979589 LY180_09590 Escherichia coli LY180 hypothetical protein YP_008565020.1 2011959 D 1335916 CDS YP_008565021.1 544390485 16979590 2012639..2013301 1 NC_022364.1 3'-5' exonuclease activity on single or double-strand DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; exodeoxyribonuclease X 2013301 16979590 LY180_09595 Escherichia coli LY180 exodeoxyribonuclease X YP_008565021.1 2012639 D 1335916 CDS YP_008565022.1 544390486 16979591 complement(2013298..2015358) 1 NC_022364.1 PtrB; oligopeptidase that cleaves peptide bonds following arginine and lysine residues; Derived by automated computational analysis using gene prediction method: Protein Homology.; protease 2015358 16979591 LY180_09600 Escherichia coli LY180 protease YP_008565022.1 2013298 R 1335916 CDS YP_008565023.1 544390487 16979592 complement(2015567..2016226) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2016226 16979592 LY180_09605 Escherichia coli LY180 membrane protein YP_008565023.1 2015567 R 1335916 CDS YP_008565024.1 544390488 16979593 complement(2016552..2016908) 1 NC_022364.1 secreted protein; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2016908 16979593 LY180_09610 Escherichia coli LY180 hypothetical protein YP_008565024.1 2016552 R 1335916 CDS YP_008565025.1 544390489 16979594 complement(2016975..2017265) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA damage-inducible protein YebG 2017265 16979594 LY180_09615 Escherichia coli LY180 DNA damage-inducible protein YebG YP_008565025.1 2016975 R 1335916 CDS YP_008565026.1 544390490 16979595 2017399..2018577 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoribosylglycinamide formyltransferase 2018577 16979595 LY180_09620 Escherichia coli LY180 phosphoribosylglycinamide formyltransferase YP_008565026.1 2017399 D 1335916 CDS YP_008565027.1 544390491 16979596 complement(2018633..2019274) 1 NC_022364.1 catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; ketohydroxyglutarate aldolase 2019274 16979596 LY180_09625 Escherichia coli LY180 ketohydroxyglutarate aldolase YP_008565027.1 2018633 R 1335916 CDS YP_008565028.1 544390492 16979597 complement(2019311..2021122) 1 NC_022364.1 catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphogluconate dehydratase 2021122 16979597 LY180_09630 Escherichia coli LY180 phosphogluconate dehydratase YP_008565028.1 2019311 R 1335916 CDS YP_008565029.1 544390493 16979598 complement(2021357..2022832) 1 NC_022364.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; glucose-6-phosphate 1-dehydrogenase 2022832 16979598 LY180_09635 Escherichia coli LY180 glucose-6-phosphate 1-dehydrogenase YP_008565029.1 2021357 R 1335916 CDS YP_008565030.1 544393015 16979599 complement(2022998..2023147) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2023147 16979599 LY180_09640 Escherichia coli LY180 hypothetical protein YP_008565030.1 2022998 R 1335916 CDS YP_008565031.1 544390494 16979600 2023170..2024039 1 NC_022364.1 Represses the expression of the zwf, eda, glp and gap; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2024039 16979600 LY180_09645 Escherichia coli LY180 transcriptional regulator YP_008565031.1 2023170 D 1335916 CDS YP_008565032.1 544390495 16979601 2024167..2025609 1 NC_022364.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology.; pyruvate kinase 2025609 16979601 LY180_09650 Escherichia coli LY180 pyruvate kinase YP_008565032.1 2024167 D 1335916 CDS YP_008565033.1 544390496 16979602 complement(2025741..2026712) 1 NC_022364.1 Transfers myristate or laurate, activated on ACP, to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA; Derived by automated computational analysis using gene prediction method: Protein Homology.; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 2026712 16979602 LY180_09655 Escherichia coli LY180 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase YP_008565033.1 2025741 R 1335916 CDS YP_008565034.1 544390497 16979603 complement(2026832..2028154) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidase 2028154 16979603 LY180_09660 Escherichia coli LY180 peptidase YP_008565034.1 2026832 R 1335916 CDS YP_008565035.1 544390498 16979604 complement(2028170..2029117) 1 NC_022364.1 involved in transport of zinc(II) with ZnuA and C; Derived by automated computational analysis using gene prediction method: Protein Homology.; zinc ABC transporter substrate-binding protein 2029117 znuA 16979604 znuA Escherichia coli LY180 zinc ABC transporter substrate-binding protein YP_008565035.1 2028170 R 1335916 CDS YP_008565036.1 544393016 16979605 2029181..2029936 1 NC_022364.1 involved in transport of zinc(II) with ZnuA and C; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; zinc transporter 2029936 znuC 16979605 znuC Escherichia coli LY180 zinc transporter YP_008565036.1 2029181 D 1335916 CDS YP_008565037.1 544390499 16979606 2029933..2030718 1 NC_022364.1 involved in transport of zinc(II) with ZnuA and C; Derived by automated computational analysis using gene prediction method: Protein Homology.; zinc transporter 2030718 znuB 16979606 znuB Escherichia coli LY180 zinc transporter YP_008565037.1 2029933 D 1335916 CDS YP_008565038.1 544393017 16979607 complement(2030897..2031877) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2031877 16979607 LY180_09680 Escherichia coli LY180 hypothetical protein YP_008565038.1 2030897 R 1335916 CDS YP_008565039.1 544390500 16979608 complement(2032145..2033155) 1 NC_022364.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Derived by automated computational analysis using gene prediction method: Protein Homology.; Holliday junction DNA helicase RuvB 2033155 ruvB 16979608 ruvB Escherichia coli LY180 Holliday junction DNA helicase RuvB YP_008565039.1 2032145 R 1335916 CDS YP_008565040.1 544390501 16979609 complement(2033164..2033775) 1 NC_022364.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Derived by automated computational analysis using gene prediction method: Protein Homology.; Holliday junction DNA helicase RuvA 2033775 ruvA 16979609 ruvA Escherichia coli LY180 Holliday junction DNA helicase RuvA YP_008565040.1 2033164 R 1335916 CDS YP_008565041.1 544390502 16979610 2034050..2034652 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2034652 16979610 LY180_09695 Escherichia coli LY180 hypothetical protein YP_008565041.1 2034050 D 1335916 CDS YP_008565042.1 544390503 16979611 complement(2034654..2035175) 1 NC_022364.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Derived by automated computational analysis using gene prediction method: Protein Homology.; Holliday junction resolvase 2035175 ruvC 16979611 ruvC Escherichia coli LY180 Holliday junction resolvase YP_008565042.1 2034654 R 1335916 CDS YP_008565043.1 544390504 16979612 complement(2035210..2035950) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2035950 16979612 LY180_09705 Escherichia coli LY180 hypothetical protein YP_008565043.1 2035210 R 1335916 CDS YP_008565044.1 544390505 16979613 complement(2035979..2036488) 1 NC_022364.1 catalyzes the formation of dihydroneopterin phosphate from dihydroneopterin triphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; dihydroneopterin triphosphate pyrophosphatase 2036488 nudB 16979613 nudB Escherichia coli LY180 dihydroneopterin triphosphate pyrophosphatase YP_008565044.1 2035979 R 1335916 CDS YP_008565045.1 544390506 16979614 complement(2036549..2038321) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; aspartyl-tRNA synthetase 2038321 16979614 LY180_09715 Escherichia coli LY180 aspartyl-tRNA synthetase YP_008565045.1 2036549 R 1335916 CDS YP_008565046.1 544390507 16979615 2038631..2039197 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrolase 2039197 16979615 LY180_09720 Escherichia coli LY180 hydrolase YP_008565046.1 2038631 D 1335916 CDS YP_008565047.1 544390508 16979616 2039194..2040012 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2040012 16979616 LY180_09725 Escherichia coli LY180 hypothetical protein YP_008565047.1 2039194 D 1335916 CDS YP_008565048.1 544390509 16979617 2040065..2040460 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2040460 16979617 LY180_09730 Escherichia coli LY180 membrane protein YP_008565048.1 2040065 D 1335916 CDS YP_008565049.1 544390510 16979618 2040501..2041244 1 NC_022364.1 catalyzes the conversion of 5-methoxyuridine to uridine-5-oxyacetic acid in tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; rRNA cytosine-C5-methyltransferase 2041244 16979618 LY180_09735 Escherichia coli LY180 rRNA cytosine-C5-methyltransferase YP_008565049.1 2040501 D 1335916 CDS YP_008565050.1 544390511 16979619 2041241..2042212 1 NC_022364.1 catalyzes the conversion of 5-hydroxyuridine to 5-methoxyuridine in tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA methyltransferase 2042212 16979619 LY180_09740 Escherichia coli LY180 tRNA methyltransferase YP_008565050.1 2041241 D 1335916 CDS YP_008565051.1 544390512 16979620 complement(2042377..2044806) 1 NC_022364.1 catalyzes the formation of biotin from biotin sulfoxide; Derived by automated computational analysis using gene prediction method: Protein Homology.; biotin sulfoxide reductase 2044806 bisC 16979620 bisC Escherichia coli LY180 biotin sulfoxide reductase YP_008565051.1 2042377 R 1335916 CDS YP_008565052.1 544390513 16979621 complement(2044831..2045931) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cytochrome C 2045931 16979621 LY180_09750 Escherichia coli LY180 cytochrome C YP_008565052.1 2044831 R 1335916 CDS YP_008565053.1 544390514 16979622 complement(2046319..2047065) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; copper homeostasis protein CutC 2047065 16979622 LY180_09755 Escherichia coli LY180 copper homeostasis protein CutC YP_008565053.1 2046319 R 1335916 CDS YP_008565054.1 544390515 16979623 complement(2047079..2047645) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2047645 16979623 LY180_09760 Escherichia coli LY180 hypothetical protein YP_008565054.1 2047079 R 1335916 CDS YP_008565055.1 544390516 16979624 2047861..2049594 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; arginyl-tRNA synthetase 2049594 16979624 LY180_09765 Escherichia coli LY180 arginyl-tRNA synthetase YP_008565055.1 2047861 D 1335916 CDS YP_008565056.1 544390517 16979625 complement(2050379..2050771) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar protein flhE 2050771 16979625 LY180_09770 Escherichia coli LY180 flagellar protein flhE YP_008565056.1 2050379 R 1335916 CDS YP_008565057.1 544390518 16979626 complement(2050771..2052849) 1 NC_022364.1 membrane protein involved in the flagellar export apparatus; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar biosynthesis protein FlhA 2052849 flhA 16979626 flhA Escherichia coli LY180 flagellar biosynthesis protein FlhA YP_008565057.1 2050771 R 1335916 CDS YP_008565058.1 544390519 16979627 complement(2052842..2053990) 1 NC_022364.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar biosynthesis protein FlhB 2053990 flhB 16979627 flhB Escherichia coli LY180 flagellar biosynthesis protein FlhB YP_008565058.1 2052842 R 1335916 CDS YP_008565059.1 544390520 16979628 complement(2054192..2054836) 1 NC_022364.1 cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation; Derived by automated computational analysis using gene prediction method: Protein Homology.; chemotaxis protein CheZ 2054836 16979628 LY180_09785 Escherichia coli LY180 chemotaxis protein CheZ YP_008565059.1 2054192 R 1335916 CDS YP_008565060.1 544390521 16979629 complement(2054847..2055236) 1 NC_022364.1 chemotaxis regulator that, when phosphorylated, interacts with the flagellar motor causing the flagella to spin clockwise which causes the cell to tumble; Derived by automated computational analysis using gene prediction method: Protein Homology.; chemotaxis protein CheY 2055236 16979629 LY180_09790 Escherichia coli LY180 chemotaxis protein CheY YP_008565060.1 2054847 R 1335916 CDS YP_008565061.1 544390522 16979630 complement(2055251..2056300) 1 NC_022364.1 regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; chemotaxis protein 2056300 16979630 LY180_09795 Escherichia coli LY180 chemotaxis protein YP_008565061.1 2055251 R 1335916 CDS YP_008565062.1 544390523 16979631 complement(2056303..2057163) 1 NC_022364.1 methylates the MCP; Derived by automated computational analysis using gene prediction method: Protein Homology.; chemotaxis protein CheR 2057163 16979631 LY180_09800 Escherichia coli LY180 chemotaxis protein CheR YP_008565062.1 2056303 R 1335916 CDS YP_008565063.1 544390524 16979632 complement(2057182..2058783) 1 NC_022364.1 serine sensor receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.; methyl-accepting chemotaxis protein 2058783 16979632 LY180_09805 Escherichia coli LY180 methyl-accepting chemotaxis protein YP_008565063.1 2057182 R 1335916 CDS YP_008565064.1 544390525 16979633 complement(2058829..2060490) 1 NC_022364.1 serine sensor receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.; methyl-accepting chemotaxis protein 2060490 16979633 LY180_09810 Escherichia coli LY180 methyl-accepting chemotaxis protein YP_008565064.1 2058829 R 1335916 CDS YP_008565065.1 544390526 16979634 complement(2060635..2061138) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; purine-binding chemotaxis protein 2061138 16979634 LY180_09815 Escherichia coli LY180 purine-binding chemotaxis protein YP_008565065.1 2060635 R 1335916 CDS YP_008565066.1 544390527 16979635 complement(2061159..2063123) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; chemotaxis protein CheA 2063123 16979635 LY180_09820 Escherichia coli LY180 chemotaxis protein CheA YP_008565066.1 2061159 R 1335916 CDS YP_008565067.1 544390528 16979636 complement(2063128..2064054) 1 NC_022364.1 with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar motor protein MotB 2064054 motB 16979636 motB Escherichia coli LY180 flagellar motor protein MotB YP_008565067.1 2063128 R 1335916 CDS YP_008565068.1 544390529 16979637 complement(2064051..2064938) 1 NC_022364.1 With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar motor protein MotA 2064938 16979637 LY180_09830 Escherichia coli LY180 flagellar motor protein MotA YP_008565068.1 2064051 R 1335916 CDS YP_008565069.1 544390530 16979638 complement(2065065..2065643) 1 NC_022364.1 With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems; Derived by automated computational analysis using gene prediction method: Protein Homology.; AraC family transcriptional regulator 2065643 16979638 LY180_09835 Escherichia coli LY180 AraC family transcriptional regulator YP_008565069.1 2065065 R 1335916 CDS YP_008565070.1 544390531 16979639 complement(2065646..2065996) 1 NC_022364.1 with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional activator FlhD 2065996 16979639 LY180_09840 Escherichia coli LY180 transcriptional activator FlhD YP_008565070.1 2065646 R 1335916 CDS YP_008565071.1 544390532 16979640 2066776..2067204 1 NC_022364.1 ppGpp-dependent; membrane-associated, stress protein produced under conditions of nutrient deprivation, osmotic shock and oxidative stress; Derived by automated computational analysis using gene prediction method: Protein Homology.; universal stress protein C 2067204 16979640 LY180_09845 Escherichia coli LY180 universal stress protein C YP_008565071.1 2066776 D 1335916 CDS YP_008565072.1 544390533 16979641 complement(2067211..2068635) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; trehalose-6-phosphate synthase 2068635 16979641 LY180_09850 Escherichia coli LY180 trehalose-6-phosphate synthase YP_008565072.1 2067211 R 1335916 CDS YP_008565073.1 544390534 16979642 complement(2068610..2069410) 1 NC_022364.1 biosynthetic; catalyzes the formation of trehalose and phosphate from trehalose-6-phosphate; expression is increased under osmotic stress and induced during the transition to stationary phase and by decreased temperature; Derived by automated computational analysis using gene prediction method: Protein Homology.; trehalose-6-phosphate phosphatase 2069410 16979642 LY180_09855 Escherichia coli LY180 trehalose-6-phosphate phosphatase YP_008565073.1 2068610 R 1335916 CDS YP_008565074.1 544390535 16979643 complement(2069577..2070563) 1 NC_022364.1 Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; Derived by automated computational analysis using gene prediction method: Protein Homology.; arabinose ABC transporter permease 2070563 araH 16979643 araH Escherichia coli LY180 arabinose ABC transporter permease YP_008565074.1 2069577 R 1335916 CDS YP_008565075.1 544390536 16979644 complement(2070578..2072092) 1 NC_022364.1 Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; Derived by automated computational analysis using gene prediction method: Protein Homology.; arabinose ABC transporter ATP-binding protein 2072092 araG 16979644 araG Escherichia coli LY180 arabinose ABC transporter ATP-binding protein YP_008565075.1 2070578 R 1335916 CDS YP_008565076.1 544390537 16979645 complement(2072162..2073151) 1 NC_022364.1 with AraGH is involved in the transport of arabinose into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; arabinose ABC transporter substrate-binding protein 2073151 16979645 LY180_09870 Escherichia coli LY180 arabinose ABC transporter substrate-binding protein YP_008565076.1 2072162 R 1335916 CDS YP_008565077.1 544390538 16979646 2073948..2074451 1 NC_022364.1 ferritin B; required for virulence in Salmonella; may be involved in repair of damaged Fe-S clusters; Derived by automated computational analysis using gene prediction method: Protein Homology.; ferritin 2074451 16979646 LY180_09875 Escherichia coli LY180 ferritin YP_008565077.1 2073948 D 1335916 CDS YP_008565078.1 544390539 16979647 complement(2074530..2074781) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2074781 16979647 LY180_09880 Escherichia coli LY180 hypothetical protein YP_008565078.1 2074530 R 1335916 CDS YP_008565079.1 544393018 16979648 complement(2075350..2075448) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2075448 16979648 LY180_09885 Escherichia coli LY180 hypothetical protein YP_008565079.1 2075350 R 1335916 CDS YP_008565080.1 544390540 16979649 2075739..2076236 1 NC_022364.1 cytoplasmic iron storage protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; ferritin 2076236 16979649 LY180_09890 Escherichia coli LY180 ferritin YP_008565080.1 2075739 D 1335916 CDS YP_008565081.1 544390541 16979650 complement(2076274..2076513) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2076513 16979650 LY180_09895 Escherichia coli LY180 hypothetical protein YP_008565081.1 2076274 R 1335916 CDS YP_008565082.1 544390542 16979651 2076704..2077915 1 NC_022364.1 tyrosine specific permease; Derived by automated computational analysis using gene prediction method: Protein Homology.; tyrosine transporter TyrP 2077915 16979651 LY180_09900 Escherichia coli LY180 tyrosine transporter TyrP YP_008565082.1 2076704 D 1335916 CDS YP_008565083.1 544390543 16979652 complement(2077977..2078642) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2078642 16979652 LY180_09905 Escherichia coli LY180 hypothetical protein YP_008565083.1 2077977 R 1335916 CDS YP_008565084.1 544390544 16979656 complement(2079291..2079839) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphatidylglycerophosphate synthetase 2079839 16979656 LY180_09925 Escherichia coli LY180 phosphatidylglycerophosphate synthetase YP_008565084.1 2079291 R 1335916 CDS YP_008565085.1 544390545 16979657 complement(2079896..2081728) 1 NC_022364.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; Derived by automated computational analysis using gene prediction method: Protein Homology.; excinuclease ABC subunit C 2081728 uvrC 16979657 uvrC Escherichia coli LY180 excinuclease ABC subunit C YP_008565085.1 2079896 R 1335916 CDS YP_008565086.1 544390546 16979658 complement(2081725..2082381) 1 NC_022364.1 in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system; in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system; Derived by automated computational analysis using gene prediction method: Protein Homology.; response regulator 2082381 sirA 16979658 sirA Escherichia coli LY180 response regulator YP_008565086.1 2081725 R 1335916 CDS YP_008565087.1 544390547 16979659 2082840..2083064 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2083064 16979659 LY180_09940 Escherichia coli LY180 hypothetical protein YP_008565087.1 2082840 D 1335916 CDS YP_008565088.1 544390548 16979660 complement(2083131..2083853) 1 NC_022364.1 regulates genes involved in cell division; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2083853 16979660 LY180_09945 Escherichia coli LY180 transcriptional regulator YP_008565088.1 2083131 R 1335916 CDS YP_008565089.1 544390549 16979661 complement(2084083..2084835) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; arginine ABC transporter ATP-binding protein 2084835 16979661 LY180_09950 Escherichia coli LY180 arginine ABC transporter ATP-binding protein YP_008565089.1 2084083 R 1335916 CDS YP_008565090.1 544390550 16979662 complement(2084832..2085500) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; amino acid ABC transporter permease 2085500 16979662 LY180_09955 Escherichia coli LY180 amino acid ABC transporter permease YP_008565090.1 2084832 R 1335916 CDS YP_008565091.1 544390551 16979663 complement(2085515..2086501) 1 NC_022364.1 catalyzes the formation of pyruvate from D-cysteine; Derived by automated computational analysis using gene prediction method: Protein Homology.; D-cysteine desulfhydrase 2086501 16979663 LY180_09960 Escherichia coli LY180 D-cysteine desulfhydrase YP_008565091.1 2085515 R 1335916 CDS YP_008565092.1 544390552 16979664 complement(2086606..2087406) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cystine transporter subunit 2087406 16979664 LY180_09965 Escherichia coli LY180 cystine transporter subunit YP_008565092.1 2086606 R 1335916 CDS YP_008565093.1 544390553 16979665 complement(2087494..2088045) 1 NC_022364.1 expression activator of the class 2 type of flagellar operons, essential to achieve maximal cell motility; activator of type 1 fimbrial gene expression; cell density-responsive regulator; FliZ in Salmonella typhimurium induces HilA, an activator of invasion genes necessary to achieve full virulence; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar biosynthesis protein FliZ 2088045 16979665 LY180_09970 Escherichia coli LY180 flagellar biosynthesis protein FliZ YP_008565093.1 2087494 R 1335916 CDS YP_008565094.1 544390554 16979666 complement(2088091..2088810) 1 NC_022364.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar biosynthesis sigma factor 2088810 fliA 16979666 fliA Escherichia coli LY180 flagellar biosynthesis sigma factor YP_008565094.1 2088091 R 1335916 CDS YP_008565095.1 544390555 16982300 complement(2089130..2090824) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellin 2090824 16982300 LY180_09980 Escherichia coli LY180 flagellin YP_008565095.1 2089130 R 1335916 CDS YP_008565096.1 544390556 16979668 2091090..2092496 1 NC_022364.1 involved in flagellin assembly; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar capping protein 2092496 fliD 16979668 fliD Escherichia coli LY180 flagellar capping protein YP_008565096.1 2091090 D 1335916 CDS YP_008565097.1 544390557 16979669 2092521..2092931 1 NC_022364.1 flagellin specific chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar biosynthesis protein FliS 2092931 fliS 16979669 fliS Escherichia coli LY180 flagellar biosynthesis protein FliS YP_008565097.1 2092521 D 1335916 CDS YP_008565098.1 544390558 16979670 2092931..2093296 1 NC_022364.1 binds flagellar cap subunits (FliD) and seems to prevents their oligomerization prior to its translocation through the flagellum-specific type III export pathway; acts as a repressor of flagellar class 2 operons by preventing FlhD2C2 to bind the promoter and inhibiting the FlhD2C2-dependent transcription; member of the type III cytoplasmic chaperone family; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar biosynthesis protein FliT 2093296 16979670 LY180_09995 Escherichia coli LY180 flagellar biosynthesis protein FliT YP_008565098.1 2092931 D 1335916 CDS YP_008565099.1 544390559 16979671 2093374..2094861 1 NC_022364.1 converts 1,4-alpha-D-glucans to maltodextrin; Derived by automated computational analysis using gene prediction method: Protein Homology.; alpha-amylase 2094861 16979671 LY180_10000 Escherichia coli LY180 alpha-amylase YP_008565099.1 2093374 D 1335916 CDS YP_008565100.1 544390560 16979672 complement(2094895..2095308) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; lipoprotein 2095308 16979672 LY180_10005 Escherichia coli LY180 lipoprotein YP_008565100.1 2094895 R 1335916 CDS YP_008565101.1 544390561 16979673 2095495..2096700 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2096700 16979673 LY180_10010 Escherichia coli LY180 membrane protein YP_008565101.1 2095495 D 1335916 CDS YP_008565102.1 544390562 16979674 2096697..2096930 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2096930 16979674 LY180_10015 Escherichia coli LY180 hypothetical protein YP_008565102.1 2096697 D 1335916 CDS YP_008565103.1 544390563 16979675 complement(2097747..2098955) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transposase IS609 2098955 16979675 LY180_10020 Escherichia coli LY180 transposase IS609 YP_008565103.1 2097747 R 1335916 CDS YP_008565104.1 544390564 16979676 2099026..2099637 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transposase TnA 2099637 16979676 LY180_10025 Escherichia coli LY180 transposase TnA YP_008565104.1 2099026 D 1335916 CDS YP_008565105.1 544393019 16979677 complement(2100367..2101164) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transcriptional regulator 2101164 16979677 LY180_10030 Escherichia coli LY180 transcriptional regulator YP_008565105.1 2100367 R 1335916 CDS YP_008565106.1 544390565 16979678 complement(2101174..2101725) 1 NC_022364.1 YbhB; similar to rat and human kinase inhibitory proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; kinase inhibitor protein 2101725 16979678 LY180_10035 Escherichia coli LY180 kinase inhibitor protein YP_008565106.1 2101174 R 1335916 CDS YP_008565107.1 544393020 16979679 complement(2101894..2102226) 1 NC_022364.1 member of the small MDR (multidrug resistance) family of transporters; in Escherichia coli this protein provides resistance against a number of positively charged compounds including ethidium bromide and erythromycin; proton-dependent secondary transporter which exchanges protons for compound translocation; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; multidrug transporter 2102226 emrE 16979679 emrE Escherichia coli LY180 multidrug transporter YP_008565107.1 2101894 R 1335916 CDS YP_008565108.1 544393021 16979680 2102354..2102482 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2102482 16979680 LY180_10045 Escherichia coli LY180 hypothetical protein YP_008565108.1 2102354 D 1335916 CDS YP_008565109.1 544390566 16979681 complement(2102560..2102874) 1 NC_022364.1 forms a junction between the M-ring and FlgB during flagella biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar hook-basal body protein FliE 2102874 fliE 16979681 fliE Escherichia coli LY180 flagellar hook-basal body protein FliE YP_008565109.1 2102560 R 1335916 CDS YP_008565110.1 544390567 16979682 2103089..2104747 1 NC_022364.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar MS-ring protein 2104747 fliF 16979682 fliF Escherichia coli LY180 flagellar MS-ring protein YP_008565110.1 2103089 D 1335916 CDS YP_008565111.1 544390568 16979683 2104740..2105735 1 NC_022364.1 One of three proteins involved in switching the direction of the flagellar rotation; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar motor switch protein FliG 2105735 fliG 16979683 fliG Escherichia coli LY180 flagellar motor switch protein FliG YP_008565111.1 2104740 D 1335916 CDS YP_008565112.1 544390569 16979684 2105728..2106414 1 NC_022364.1 binds to and inhibits the function of flagella specific ATPase FliI; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar assembly protein H 2106414 fliH 16979684 fliH Escherichia coli LY180 flagellar assembly protein H YP_008565112.1 2105728 D 1335916 CDS YP_008565113.1 544390570 16979685 2106414..2107787 1 NC_022364.1 involved in type III protein export during flagellum assembly; Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP synthase 2107787 fliI 16979685 fliI Escherichia coli LY180 ATP synthase YP_008565113.1 2106414 D 1335916 CDS YP_008565114.1 544390571 16979686 2107806..2108249 1 NC_022364.1 rod/hook and filament chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar biosynthesis chaperone 2108249 fliJ 16979686 fliJ Escherichia coli LY180 flagellar biosynthesis chaperone YP_008565114.1 2107806 D 1335916 CDS YP_008565115.1 544390572 16979687 2108246..2109373 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar hook-length control protein FliK 2109373 16979687 LY180_10080 Escherichia coli LY180 flagellar hook-length control protein FliK YP_008565115.1 2108246 D 1335916 CDS YP_008565116.1 544390573 16979688 2109478..2109942 1 NC_022364.1 interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar basal body protein FliL 2109942 fliL 16979688 fliL Escherichia coli LY180 flagellar basal body protein FliL YP_008565116.1 2109478 D 1335916 CDS YP_008565117.1 544390574 16979689 2109947..2110951 1 NC_022364.1 with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar motor switch protein FliM 2110951 fliM 16979689 fliM Escherichia coli LY180 flagellar motor switch protein FliM YP_008565117.1 2109947 D 1335916 CDS YP_008565118.1 544390575 16979690 2110948..2111361 1 NC_022364.1 One of three proteins involved in switching the direction of the flagellar rotation; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar motor switch protein FliN 2111361 fliN 16979690 fliN Escherichia coli LY180 flagellar motor switch protein FliN YP_008565118.1 2110948 D 1335916 CDS YP_008565119.1 544390576 16979691 2111364..2111729 1 NC_022364.1 with FlhA, FlhB, FliP, FliQ and FliR is one of the membrane components of the flagellar export apparatus; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar biosynthesis protein FliO 2111729 16979691 LY180_10100 Escherichia coli LY180 flagellar biosynthesis protein FliO YP_008565119.1 2111364 D 1335916 CDS YP_008565120.1 544390577 16979692 2111729..2112466 1 NC_022364.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar biosynthesis protein FliP 2112466 fliP 16979692 fliP Escherichia coli LY180 flagellar biosynthesis protein FliP YP_008565120.1 2111729 D 1335916 CDS YP_008565121.1 544390578 16979693 2112476..2112745 1 NC_022364.1 with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar biosynthesis protein FliQ 2112745 fliQ 16979693 fliQ Escherichia coli LY180 flagellar biosynthesis protein FliQ YP_008565121.1 2112476 D 1335916 CDS YP_008565122.1 544390579 16979694 2112754..2113539 1 NC_022364.1 FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar biosynthesis protein FliR 2113539 fliR 16979694 fliR Escherichia coli LY180 flagellar biosynthesis protein FliR YP_008565122.1 2112754 D 1335916 CDS YP_008565123.1 544390580 16979695 2113829..2114452 1 NC_022364.1 with RcsB is a positive regulator of capsular polysaccharide synthesis genes; Derived by automated computational analysis using gene prediction method: Protein Homology.; colanic acid capsular biosynthesis activation protein A 2114452 rcsA 16979695 rcsA Escherichia coli LY180 colanic acid capsular biosynthesis activation protein A YP_008565123.1 2113829 D 1335916 CDS YP_008565124.1 544390581 16979696 complement(2114496..2114684) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2114684 16979696 LY180_10125 Escherichia coli LY180 hypothetical protein YP_008565124.1 2114496 R 1335916 CDS YP_008565125.1 544390582 16979697 2114847..2115074 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2115074 16979697 LY180_10130 Escherichia coli LY180 hypothetical protein YP_008565125.1 2114847 D 1335916 CDS YP_008565126.1 544390583 16979698 2115372..2116187 1 NC_022364.1 catalyzes the hydrolysis of mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate; Derived by automated computational analysis using gene prediction method: Protein Homology.; mannosyl-3-phosphoglycerate phosphatase 2116187 16979698 LY180_10135 Escherichia coli LY180 mannosyl-3-phosphoglycerate phosphatase YP_008565126.1 2115372 D 1335916 CDS YP_008565127.1 544390584 16979699 complement(2116184..2117878) 1 NC_022364.1 catalyzes the formation of cyclic di-3',5'-guanylate from guanosine triphosphate; involved in the regulation of cellulose biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; diguanylate cyclase 2117878 16979699 LY180_10140 Escherichia coli LY180 diguanylate cyclase YP_008565127.1 2116184 R 1335916 CDS YP_008565128.1 544390585 16979700 complement(2118049..2118231) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2118231 16979700 LY180_10145 Escherichia coli LY180 hypothetical protein YP_008565128.1 2118049 R 1335916 CDS YP_008565129.1 544390586 16979701 complement(2118310..2119227) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2119227 16979701 LY180_10150 Escherichia coli LY180 membrane protein YP_008565129.1 2118310 R 1335916 CDS YP_008565130.1 544390587 16979702 2119400..2120329 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug transporter 2120329 16979702 LY180_10155 Escherichia coli LY180 multidrug transporter YP_008565130.1 2119400 D 1335916 CDS YP_008565131.1 544390588 16979703 complement(2120318..2120788) 1 NC_022364.1 DNA mismatch endonuclease; recognizes and repairs T:G mismatches; Derived by automated computational analysis using gene prediction method: Protein Homology.; very short patch repair endonuclease 2120788 16979703 LY180_10160 Escherichia coli LY180 very short patch repair endonuclease YP_008565131.1 2120318 R 1335916 CDS YP_008565132.1 544390589 16979704 complement(2120769..2122187) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA-cytosine methyltransferase 2122187 16979704 LY180_10165 Escherichia coli LY180 DNA-cytosine methyltransferase YP_008565132.1 2120769 R 1335916 CDS YP_008565133.1 544393022 16979705 complement(2122254..2122949) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2122949 16979705 LY180_10170 Escherichia coli LY180 hypothetical protein YP_008565133.1 2122254 R 1335916 CDS YP_008565134.1 544393023 16979706 complement(2122989..2123270) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2123270 16979706 LY180_10175 Escherichia coli LY180 hypothetical protein YP_008565134.1 2122989 R 1335916 CDS YP_008565135.1 544390590 16979707 2123921..2125036 1 NC_022364.1 allows for ions and hydrophilic solutes to cross the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; outer membrane porin protein C 2125036 16979707 LY180_10180 Escherichia coli LY180 outer membrane porin protein C YP_008565135.1 2123921 D 1335916 CDS YP_008565136.1 544390591 16979708 2125628..2126479 1 NC_022364.1 Hsp31 stabilizes early unfolding protein intermediates under severe heat stress; Derived by automated computational analysis using gene prediction method: Protein Homology.; heat shock protein HSP31 2126479 16979708 LY180_10185 Escherichia coli LY180 heat shock protein HSP31 YP_008565136.1 2125628 D 1335916 CDS YP_008565137.1 544390592 16979709 complement(2126587..2127945) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sensor histidine kinase 2127945 16979709 LY180_10190 Escherichia coli LY180 sensor histidine kinase YP_008565137.1 2126587 R 1335916 CDS YP_008565138.1 544390593 16979710 complement(2127945..2128664) 1 NC_022364.1 induced by CusR in the presence of copper; YedW induces the expression of the upstream gene yedV (encoding a sensor kinase) as well as yedW; yedVW is one of four copper regulons found in E. coli; part of the copper homeostasis mechanism; confers resistance to copper and several drugs when induced; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2128664 16979710 LY180_10195 Escherichia coli LY180 transcriptional regulator YP_008565138.1 2127945 R 1335916 CDS YP_008565139.1 544390594 16979711 2128749..2129162 1 NC_022364.1 catalyzes the formation of 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline from 5-hydroxyisourate; Derived by automated computational analysis using gene prediction method: Protein Homology.; hydroxyisourate hydrolase 2129162 16979711 LY180_10200 Escherichia coli LY180 hydroxyisourate hydrolase YP_008565139.1 2128749 D 1335916 CDS YP_008565140.1 544390595 16979712 2129271..2130275 1 NC_022364.1 in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; requires inner membrane anchor protein YedZ; Derived by automated computational analysis using gene prediction method: Protein Homology.; TMAO/DMSO reductase 2130275 16979712 LY180_10205 Escherichia coli LY180 TMAO/DMSO reductase YP_008565140.1 2129271 D 1335916 CDS YP_008565141.1 544390596 16979713 2130276..2130911 1 NC_022364.1 in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme; Derived by automated computational analysis using gene prediction method: Protein Homology.; sulfite oxidase subunit YedZ 2130911 16979713 LY180_10210 Escherichia coli LY180 sulfite oxidase subunit YedZ YP_008565141.1 2130276 D 1335916 CDS YP_008565142.1 544390597 16979714 2131168..2131818 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; zinc/cadmium-binding protein 2131818 16979714 LY180_10215 Escherichia coli LY180 zinc/cadmium-binding protein YP_008565142.1 2131168 D 1335916 CDS YP_008565143.1 544390598 16979715 2132161..2132691 1 NC_022364.1 B-type di-heme cytochrome with a major alpha-absorption peak at 561 nm and a minor peak at 555 nm; Derived by automated computational analysis using gene prediction method: Protein Homology.; cytochrome B561 2132691 16979715 LY180_10220 Escherichia coli LY180 cytochrome B561 YP_008565143.1 2132161 D 1335916 CDS YP_008565144.1 544390599 16979717 2133405..2134241 1 NC_022364.1 Mlc anti-repressor; regulates ptsG by binding and inactivating Mlc; Derived by automated computational analysis using gene prediction method: Protein Homology.; DgsA anti-repressor MtfA 2134241 16979717 LY180_10230 Escherichia coli LY180 DgsA anti-repressor MtfA YP_008565144.1 2133405 D 1335916 CDS YP_008565145.1 544393024 16979719 2136293..2141806 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2141806 16979719 LY180_10240 Escherichia coli LY180 hypothetical protein YP_008565145.1 2136293 D 1335916 CDS YP_008565146.1 544390600 16979720 complement(2142068..2143120) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2143120 16979720 LY180_10245 Escherichia coli LY180 hypothetical protein YP_008565146.1 2142068 R 1335916 CDS YP_008565147.1 544390601 16979721 2143435..2144751 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; shikimate transporter 2144751 16979721 LY180_10250 Escherichia coli LY180 shikimate transporter YP_008565147.1 2143435 D 1335916 CDS YP_008565148.1 544390602 16979722 2144853..2146307 1 NC_022364.1 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile; Derived by automated computational analysis using gene prediction method: Protein Homology.; AMP nucleosidase 2146307 16979722 LY180_10255 Escherichia coli LY180 AMP nucleosidase YP_008565148.1 2144853 D 1335916 CDS YP_008565149.1 544390603 16979723 2146650..2147273 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2147273 16979723 LY180_10260 Escherichia coli LY180 hypothetical protein YP_008565149.1 2146650 D 1335916 CDS YP_008565150.1 544393025 16979724 complement(2147283..2148491) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2148491 16979724 LY180_10265 Escherichia coli LY180 hypothetical protein YP_008565150.1 2147283 R 1335916 CDS YP_008565151.1 544393026 16979725 2148564..2148704 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2148704 16979725 LY180_10270 Escherichia coli LY180 hypothetical protein YP_008565151.1 2148564 D 1335916 CDS YP_008565152.1 544393027 16979726 complement(2148705..2148932) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2148932 16979726 LY180_10275 Escherichia coli LY180 hypothetical protein YP_008565152.1 2148705 R 1335916 CDS YP_008565153.1 544390604 16979728 complement(2149339..2150826) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; MATE family multidrug exporter 2150826 16979728 LY180_10285 Escherichia coli LY180 MATE family multidrug exporter YP_008565153.1 2149339 R 1335916 CDS YP_008565154.1 544390605 16979730 complement(2151100..2152050) 1 NC_022364.1 LysR-type transcriptional regulator similar to CysB; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates two operons consisting of ABC transporters that are part of the cys regulon; regulated by CysB; DNA-binding transcriptional activator for the ssuEADCB and tauABCD operons; Derived by automated computational analysis using gene prediction method: Protein Homology.; CysB family transcriptional regulator 2152050 cbl 16979730 cbl Escherichia coli LY180 CysB family transcriptional regulator YP_008565154.1 2151100 R 1335916 CDS YP_008565155.1 544390606 16979731 complement(2152152..2153069) 1 NC_022364.1 Transcriptional activator for the hut, put and ure operons and repressor for the gdh and gltB operons in response to nitrogen limitation; Derived by automated computational analysis using gene prediction method: Protein Homology.; LysR family transcriptional regulator 2153069 16979731 LY180_10300 Escherichia coli LY180 LysR family transcriptional regulator YP_008565155.1 2152152 R 1335916 CDS YP_008565156.1 544390607 16979733 complement(2153527..2154459) 1 NC_022364.1 catalyzes th removal of D-alanine and attachment of the murein lipoprotein to the peptidoglycan tetrapeptide chain; Derived by automated computational analysis using gene prediction method: Protein Homology.; L,D-transpeptidase 2154459 16979733 LY180_10310 Escherichia coli LY180 L,D-transpeptidase YP_008565156.1 2153527 R 1335916 CDS YP_008565157.1 544390608 16979734 complement(2154524..2155603) 1 NC_022364.1 catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole; Derived by automated computational analysis using gene prediction method: Protein Homology.; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 2155603 cobT 16979734 cobT Escherichia coli LY180 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_008565157.1 2154524 R 1335916 CDS YP_008565158.1 544390609 16979735 complement(2155615..2156358) 1 NC_022364.1 catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole; Derived by automated computational analysis using gene prediction method: Protein Homology.; cobalamin synthase 2156358 cobS 16979735 cobS Escherichia coli LY180 cobalamin synthase YP_008565158.1 2155615 R 1335916 CDS YP_008565159.1 544390610 16979736 complement(2156355..2156900) 1 NC_022364.1 catalyzes ATP-dependent phosphorylation of adenosylcobinamide to form adenosylcobinamide phosphate and the addition of guanosine monophosphate to adenosylcobinamide phosphate to form adenosylcobinamide-GDP; Derived by automated computational analysis using gene prediction method: Protein Homology.; adenosylcobinamide kinase 2156900 cobU 16979736 cobU Escherichia coli LY180 adenosylcobinamide kinase YP_008565159.1 2156355 R 1335916 CDS YP_008565160.1 544390611 16979737 complement(2157359..2157688) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2157688 16979737 LY180_10330 Escherichia coli LY180 hypothetical protein YP_008565160.1 2157359 R 1335916 CDS YP_008565161.1 544390612 16979738 complement(2157860..2158918) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2158918 16979738 LY180_10335 Escherichia coli LY180 membrane protein YP_008565161.1 2157860 R 1335916 CDS YP_008565162.1 544390613 16979739 complement(2159116..2159589) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA gyrase inhibitor 2159589 16979739 LY180_10340 Escherichia coli LY180 DNA gyrase inhibitor YP_008565162.1 2159116 R 1335916 CDS YP_008565163.1 544390614 16979740 complement(2159708..2160874) 1 NC_022364.1 removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors; penicillin-binding protein 6B; one of four, DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains; Derived by automated computational analysis using gene prediction method: Protein Homology.; D-alanyl-D-alanine carboxypeptidase 2160874 16979740 LY180_10345 Escherichia coli LY180 D-alanyl-D-alanine carboxypeptidase YP_008565163.1 2159708 R 1335916 CDS YP_008565164.1 544390615 16979741 2161083..2162510 1 NC_022364.1 Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates; Derived by automated computational analysis using gene prediction method: Protein Homology.; exonuclease I 2162510 sbcB 16979741 sbcB Escherichia coli LY180 exonuclease I YP_008565164.1 2161083 D 1335916 CDS YP_008565165.1 544390616 16979742 complement(2162553..2162780) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2162780 16979742 LY180_10355 Escherichia coli LY180 membrane protein YP_008565165.1 2162553 R 1335916 CDS YP_008565166.1 544390617 16979743 complement(2162794..2163852) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2163852 16979743 LY180_10360 Escherichia coli LY180 membrane protein YP_008565166.1 2162794 R 1335916 CDS YP_008565167.1 544390618 16979744 complement(2164031..2165389) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; putrescine/spermidine ABC transporter 2165389 16979744 LY180_10365 Escherichia coli LY180 putrescine/spermidine ABC transporter YP_008565167.1 2164031 R 1335916 CDS YP_008565168.1 544390619 16979745 complement(2165656..2166585) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LysR family transcripitonal regulator 2166585 16979745 LY180_10370 Escherichia coli LY180 LysR family transcripitonal regulator YP_008565168.1 2165656 R 1335916 CDS YP_008565169.1 544390620 16979746 complement(2166631..2167455) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2167455 16979746 LY180_10375 Escherichia coli LY180 hypothetical protein YP_008565169.1 2166631 R 1335916 CDS YP_008565170.1 544390621 16979747 complement(2167538..2167792) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; toxin YoeB 2167792 16979747 LY180_10380 Escherichia coli LY180 toxin YoeB YP_008565170.1 2167538 R 1335916 CDS YP_008565171.1 544390622 16979748 complement(2167789..2168040) 1 NC_022364.1 Antitoxin that counteracts the effect of the YoeB toxin; Derived by automated computational analysis using gene prediction method: Protein Homology.; antitoxin 2168040 16979748 LY180_10385 Escherichia coli LY180 antitoxin YP_008565171.1 2167789 R 1335916 CDS YP_008565172.1 544390623 16979749 2168519..2169418 1 NC_022364.1 long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP phosphoribosyltransferase 2169418 hisG 16979749 hisG Escherichia coli LY180 ATP phosphoribosyltransferase YP_008565172.1 2168519 D 1335916 CDS YP_008565173.1 544390624 16979750 2169424..2170728 1 NC_022364.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional histidinal dehydrogenase/ histidinol dehydrogenase 2170728 hisD 16979750 hisD Escherichia coli LY180 bifunctional histidinal dehydrogenase/ histidinol dehydrogenase YP_008565173.1 2169424 D 1335916 CDS YP_008565174.1 544390625 16979751 2170725..2171795 1 NC_022364.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; histidinol-phosphate aminotransferase 2171795 16979751 LY180_10400 Escherichia coli LY180 histidinol-phosphate aminotransferase YP_008565174.1 2170725 D 1335916 CDS YP_008565175.1 544390626 16979752 2171795..2172862 1 NC_022364.1 catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; imidazoleglycerol-phosphate dehydratase 2172862 16979752 LY180_10405 Escherichia coli LY180 imidazoleglycerol-phosphate dehydratase YP_008565175.1 2171795 D 1335916 CDS YP_008565176.1 544390627 16979753 2172862..2173452 1 NC_022364.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; Derived by automated computational analysis using gene prediction method: Protein Homology.; imidazole glycerol phosphate synthase 2173452 hisH 16979753 hisH Escherichia coli LY180 imidazole glycerol phosphate synthase YP_008565176.1 2172862 D 1335916 CDS YP_008565177.1 544390628 16979754 2173452..2174189 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 2174189 16979754 LY180_10415 Escherichia coli LY180 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_008565177.1 2173452 D 1335916 CDS YP_008565178.1 544390629 16979755 2174171..2174947 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; imidazole glycerol phosphate synthase 2174947 16979755 LY180_10420 Escherichia coli LY180 imidazole glycerol phosphate synthase YP_008565178.1 2174171 D 1335916 CDS YP_008565179.1 544390630 16979756 2174941..2175549 1 NC_022364.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoribosyl-AMP cyclohydrolase 2175549 16979756 LY180_10425 Escherichia coli LY180 phosphoribosyl-AMP cyclohydrolase YP_008565179.1 2174941 D 1335916 CDS YP_008565180.1 544390631 16979757 complement(2175645..2176625) 1 NC_022364.1 regulator of length of O-antigen component of lipopolysaccharide chains; Derived by automated computational analysis using gene prediction method: Protein Homology.; chain-length determining protein 2176625 16979757 LY180_10430 Escherichia coli LY180 chain-length determining protein YP_008565180.1 2175645 R 1335916 CDS YP_008565181.1 544390632 16979758 complement(2176768..2177934) 1 NC_022364.1 catalyzes the formation of UDP-glucuronate from UDP-glucose; Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP-glucose 6-dehydrogenase 2177934 16979758 LY180_10435 Escherichia coli LY180 UDP-glucose 6-dehydrogenase YP_008565181.1 2176768 R 1335916 CDS YP_008565182.1 544390633 16979759 complement(2178183..2179589) 1 NC_022364.1 catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 6-phosphogluconate dehydrogenase 2179589 16979759 LY180_10440 Escherichia coli LY180 6-phosphogluconate dehydrogenase YP_008565182.1 2178183 R 1335916 CDS YP_008565183.1 544390634 16979760 complement(2179753..2181123) 1 NC_022364.1 capsular polysaccharide biosynthesis protein; catalyzes the formation of D-mannose 6-phosphate from alpha-D-mannose 1-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphomannomutase 2181123 16979760 LY180_10445 Escherichia coli LY180 phosphomannomutase YP_008565183.1 2179753 R 1335916 CDS YP_008565184.1 544390635 16979761 complement(2181206..2182645) 1 NC_022364.1 capsular polysaccharide colanic acid biosynthesis protein; catalyzes the formation of GDP-mannose from GTP and alpha-D-mannose 1-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; mannose-1-phosphate guanyltransferase 2182645 cpsB 16979761 cpsB Escherichia coli LY180 mannose-1-phosphate guanyltransferase YP_008565184.1 2181206 R 1335916 CDS YP_008565185.1 544393028 16979762 complement(2182635..2183840) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; glycosyl transferase family 1 2183840 16979762 LY180_10455 Escherichia coli LY180 glycosyl transferase family 1 YP_008565185.1 2182635 R 1335916 CDS YP_008565186.1 544390636 16979763 complement(2183861..2184868) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP-galactose-4-epimerase 2184868 16979763 LY180_10460 Escherichia coli LY180 UDP-galactose-4-epimerase YP_008565186.1 2183861 R 1335916 CDS YP_008565187.1 544393029 16979764 complement(2184885..2186030) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; glycosyl transferase family 1 2186030 16979764 LY180_10465 Escherichia coli LY180 glycosyl transferase family 1 YP_008565187.1 2184885 R 1335916 CDS YP_008565188.1 544393030 16979765 complement(2186017..2187048) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; glycosyl transferase family 1 2187048 16979765 LY180_10470 Escherichia coli LY180 glycosyl transferase family 1 YP_008565188.1 2186017 R 1335916 CDS YP_008565189.1 544393031 16979766 complement(2187045..2187905) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; glycosyl transferase family A 2187905 16979766 LY180_10475 Escherichia coli LY180 glycosyl transferase family A YP_008565189.1 2187045 R 1335916 CDS YP_008565190.1 544393032 16979767 complement(2187911..2189254) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; polymerase 2189254 16979767 LY180_10480 Escherichia coli LY180 polymerase YP_008565190.1 2187911 R 1335916 CDS YP_008565191.1 544393033 16979768 complement(2189254..2190492) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; polysaccharide biosynthesis protein 2190492 16979768 LY180_10485 Escherichia coli LY180 polysaccharide biosynthesis protein YP_008565191.1 2189254 R 1335916 CDS YP_008565192.1 544390637 16979769 complement(2190867..2191760) 1 NC_022364.1 together with GalF subunit composes the UTP--glucose-1-phosphate uridylyltransferase, an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate; regulates cellular levels of UDP-glucose; Derived by automated computational analysis using gene prediction method: Protein Homology.; UTP--glucose-1-phosphate uridylyltransferase subunit GalU 2191760 16979769 LY180_10490 Escherichia coli LY180 UTP--glucose-1-phosphate uridylyltransferase subunit GalU YP_008565192.1 2190867 R 1335916 CDS YP_008565193.1 544390638 16979770 complement(2191935..2193329) 1 NC_022364.1 WcaM from Salmonella enterica is essential for biofilm formation on HEp-2 cells and chicken intestinal tissue but not on a plastic surface; may be involved in the biosynthesis of colanic acid; Derived by automated computational analysis using gene prediction method: Protein Homology.; colanic acid biosynthesis protein 2193329 wcaM 16979770 wcaM Escherichia coli LY180 colanic acid biosynthesis protein YP_008565193.1 2191935 R 1335916 CDS YP_008565194.1 544390639 16979771 complement(2193340..2194560) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; colanic acid biosynthesis glycosyltransferase WcaL 2194560 16979771 LY180_10500 Escherichia coli LY180 colanic acid biosynthesis glycosyltransferase WcaL YP_008565194.1 2193340 R 1335916 CDS YP_008565195.1 544390640 16979772 complement(2194557..2195837) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; colanic acid biosynthesis protein 2195837 16979772 LY180_10505 Escherichia coli LY180 colanic acid biosynthesis protein YP_008565195.1 2194557 R 1335916 CDS YP_008565196.1 544390641 16979773 complement(2196209..2197687) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; colanic acid exporter 2197687 16979773 LY180_10510 Escherichia coli LY180 colanic acid exporter YP_008565196.1 2196209 R 1335916 CDS YP_008565197.1 544390642 16979774 complement(2197689..2199083) 1 NC_022364.1 WcaJ; glucose-1-phosphate transferase responsible for the addition of the first glucose-1-phosphate from UDP-glucose to the lipid carrier undecaprenyl phosphate in the biosynthesis of colanic acid; Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP-glucose lipid carrier transferase 2199083 16979774 LY180_10515 Escherichia coli LY180 UDP-glucose lipid carrier transferase YP_008565197.1 2197689 R 1335916 CDS YP_008565198.1 544390643 16979775 complement(2199138..2200508) 1 NC_022364.1 capsular polysaccharide biosynthesis protein; catalyzes the formation of D-mannose 6-phosphate from alpha-D-mannose 1-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphomannomutase 2200508 16979775 LY180_10520 Escherichia coli LY180 phosphomannomutase YP_008565198.1 2199138 R 1335916 CDS YP_008565199.1 544393034 16979776 2200534..2200692 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2200692 16979776 LY180_10525 Escherichia coli LY180 hypothetical protein YP_008565199.1 2200534 D 1335916 CDS YP_008565200.1 544390644 16979777 complement(2200701..2202137) 1 NC_022364.1 capsular polysaccharide colanic acid biosynthesis protein; catalyzes the formation of GDP-mannose from GTP and alpha-D-mannose 1-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; mannose-1-phosphate guanyltransferase 2202137 cpsB 16979777 cpsB Escherichia coli LY180 mannose-1-phosphate guanyltransferase YP_008565200.1 2200701 R 1335916 CDS YP_008565201.1 544390645 16979778 complement(2202140..2203363) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glycosyl transferase 2203363 16979778 LY180_10535 Escherichia coli LY180 glycosyl transferase YP_008565201.1 2202140 R 1335916 CDS YP_008565202.1 544390646 16979779 complement(2203360..2203842) 1 NC_022364.1 catalyzes the formation of GDP and D-mannose from GDP-D-mannose; also hydrolyzes GDP-glucose; Derived by automated computational analysis using gene prediction method: Protein Homology.; GDP-mannose mannosyl hydrolase NudD 2203842 16979779 LY180_10540 Escherichia coli LY180 GDP-mannose mannosyl hydrolase NudD YP_008565202.1 2203360 R 1335916 CDS YP_008565203.1 544390647 16979780 complement(2203842..2204807) 1 NC_022364.1 bifunctional GDP-4-dehydro-6-deoxy-D-mannose epimerase/ GDP-4-dehydro-6-L-deoxygalactose reductase;catalyzes the formation of GDP-fucose from GDP-4-dehydro-6-deoxy-D-mannose; Derived by automated computational analysis using gene prediction method: Protein Homology.; GDP-fucose synthetase 2204807 16979780 LY180_10545 Escherichia coli LY180 GDP-fucose synthetase YP_008565203.1 2203842 R 1335916 CDS YP_008565204.1 544390648 16979781 complement(2204810..2205931) 1 NC_022364.1 catalyzes the formation of GDP-4-dehydro-6-deoxy-D-mannose from GDP mannose; Derived by automated computational analysis using gene prediction method: Protein Homology.; GDP-mannose 4,6-dehydratase 2205931 16979781 LY180_10550 Escherichia coli LY180 GDP-mannose 4,6-dehydratase YP_008565204.1 2204810 R 1335916 CDS YP_008565205.1 544390649 16979782 complement(2205957..2206505) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acyl transferase 2206505 16979782 LY180_10555 Escherichia coli LY180 acyl transferase YP_008565205.1 2205957 R 1335916 CDS YP_008565206.1 544390650 16979783 complement(2206521..2207267) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glycosyl transferase 2207267 16979783 LY180_10560 Escherichia coli LY180 glycosyl transferase YP_008565206.1 2206521 R 1335916 CDS YP_008565207.1 544390651 16979784 complement(2207278..2208495) 1 NC_022364.1 essential for colanic acid biosynthesis; colanic acid is an exopolysaccharide produced under stress conditions that confers acid and heat tolerance; Derived by automated computational analysis using gene prediction method: Protein Homology.; colanic acid biosynthesis protein 2208495 wcaD 16979784 wcaD Escherichia coli LY180 colanic acid biosynthesis protein YP_008565207.1 2207278 R 1335916 CDS YP_008565208.1 544390652 16979785 complement(2208470..2209687) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glycosyl transferase 2209687 16979785 LY180_10570 Escherichia coli LY180 glycosyl transferase YP_008565208.1 2208470 R 1335916 CDS YP_008565209.1 544390653 16979786 complement(2209684..2210172) 1 NC_022364.1 acetyltransferase believed to catalyze the addition of the acetyl group that is attached through an O linkage to the first fucosyl residue of the colanic acid repetitive unit (E unit); wcaB is induced in sessile bacteria and by osmotic shock, and repressed when grown in rich medium; Derived by automated computational analysis using gene prediction method: Protein Homology.; acyl transferase 2210172 16979786 LY180_10575 Escherichia coli LY180 acyl transferase YP_008565209.1 2209684 R 1335916 CDS YP_008565210.1 544390654 16979787 complement(2210175..2211014) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glycosyl transferase 2211014 16979787 LY180_10580 Escherichia coli LY180 glycosyl transferase YP_008565210.1 2210175 R 1335916 CDS YP_008565211.1 544390655 16979788 complement(2211192..2213354) 1 NC_022364.1 Wzc; catalyzes the autophosphorylation on tyrosine residues which downregulates the biosynthesis of colonic acid (an extracellular polysaccharide); Derived by automated computational analysis using gene prediction method: Protein Homology.; tyrosine kinase 2213354 16979788 LY180_10585 Escherichia coli LY180 tyrosine kinase YP_008565211.1 2211192 R 1335916 CDS YP_008565212.1 544390656 16979789 complement(2213357..2213800) 1 NC_022364.1 Wzb shows phosphatase activity towards the autophosphorylated Wzc protein, which induces colanic acid biosynthesis; catalyzes the phosphorylation of UDP-glucose dehydrogenase, an enzyme involved in colanic acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; protein-tyrosine phosphatase 2213800 16979789 LY180_10590 Escherichia coli LY180 protein-tyrosine phosphatase YP_008565212.1 2213357 R 1335916 CDS YP_008565213.1 544390657 16979790 complement(2213806..2214945) 1 NC_022364.1 required for the translocation of capsular polysaccharide through the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; polysaccharide export protein Wza 2214945 16979790 LY180_10595 Escherichia coli LY180 polysaccharide export protein Wza YP_008565213.1 2213806 R 1335916 CDS YP_008565214.1 544390658 16979791 2215604..2217187 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2217187 16979791 LY180_10600 Escherichia coli LY180 membrane protein YP_008565214.1 2215604 D 1335916 CDS YP_008565215.1 544393035 16979792 2217262..2217600 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; toxin RelE 2217600 16979792 LY180_10605 Escherichia coli LY180 toxin RelE YP_008565215.1 2217262 D 1335916 CDS YP_008565216.1 544390659 16979793 2217590..2217880 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; XRE family transcriptional regulator 2217880 16979793 LY180_10610 Escherichia coli LY180 XRE family transcriptional regulator YP_008565216.1 2217590 D 1335916 CDS YP_008565217.1 544390660 16979794 complement(2217933..2219786) 1 NC_022364.1 YegA; inner membrane protein involved in the assembly of outer membrane proteins (OMPs); asmA-null mutants show low lipopolysaccharide (LPS) levels, suggesting a role in LPS biogenesis and/or in restricting outer membrane fluidity, resulting on altered assembly of OMPs; Derived by automated computational analysis using gene prediction method: Protein Homology.; assembly protein 2219786 16979794 LY180_10615 Escherichia coli LY180 assembly protein YP_008565217.1 2217933 R 1335916 CDS YP_008565218.1 544390661 16979795 complement(2219808..2220389) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; deoxycytidine triphosphate deaminase 2220389 16979795 LY180_10620 Escherichia coli LY180 deoxycytidine triphosphate deaminase YP_008565218.1 2219808 R 1335916 CDS YP_008565219.1 544390662 16979796 complement(2220481..2221122) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; uridine/cytidine kinase 2221122 16979796 LY180_10625 Escherichia coli LY180 uridine/cytidine kinase YP_008565219.1 2220481 R 1335916 CDS YP_008565220.1 544390663 16979797 2221440..2224757 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; diguanylate cyclase 2224757 16979797 LY180_10630 Escherichia coli LY180 diguanylate cyclase YP_008565220.1 2221440 D 1335916 CDS YP_008565221.1 544390664 16979798 complement(2224796..2225653) 1 NC_022364.1 inducible, catalyzes the hydrolysis of alkylated DNA, releasing 3-methyladenine, 3-methylguanine, 7-methylguanine and 7-methyladenine; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-methyl-adenine DNA glycosylase 2225653 16979798 LY180_10635 Escherichia coli LY180 3-methyl-adenine DNA glycosylase YP_008565221.1 2224796 R 1335916 CDS YP_008565222.1 544390665 16979799 2225787..2227139 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; chaperone 2227139 16979799 LY180_10640 Escherichia coli LY180 chaperone YP_008565222.1 2225787 D 1335916 CDS YP_008565223.1 544390666 16979800 complement(2227151..2229097) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2229097 16979800 LY180_10645 Escherichia coli LY180 hypothetical protein YP_008565223.1 2227151 R 1335916 CDS YP_008565224.1 544390667 16979801 2229295..2229756 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2229756 16979801 LY180_10650 Escherichia coli LY180 hypothetical protein YP_008565224.1 2229295 D 1335916 CDS YP_008565225.1 544390668 16979802 complement(2229821..2230582) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2230582 16979802 LY180_10655 Escherichia coli LY180 hypothetical protein YP_008565225.1 2229821 R 1335916 CDS YP_008565226.1 544390669 16979803 complement(2230579..2231238) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2231238 16979803 LY180_10660 Escherichia coli LY180 hypothetical protein YP_008565226.1 2230579 R 1335916 CDS YP_008565227.1 544390670 16979804 2232454..2233701 1 NC_022364.1 Part of a tripartite efflux system composed of MdtA, MdtB and MdtC which confers resistance against novobiocin and deoxycholate; Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug transporter 2233701 16979804 LY180_10665 Escherichia coli LY180 multidrug transporter YP_008565227.1 2232454 D 1335916 CDS YP_008565228.1 544390671 16979805 2233701..2236823 1 NC_022364.1 Part of a tripartite efflux system composed of MdtA, MdtB and MdtC which confers resistance against novobiocin and deoxycholate; Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug transporter 2236823 16979805 LY180_10670 Escherichia coli LY180 multidrug transporter YP_008565228.1 2233701 D 1335916 CDS YP_008565229.1 544390672 16979806 2236824..2239901 1 NC_022364.1 Part of a tripartite efflux system composed of MdtA, MdtB and MdtC; confers resistance against novobiocin and deoxycholate; Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug transporter 2239901 16979806 LY180_10675 Escherichia coli LY180 multidrug transporter YP_008565229.1 2236824 D 1335916 CDS YP_008565230.1 544390673 16979807 2239902..2241317 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 2241317 16979807 LY180_10680 Escherichia coli LY180 transporter YP_008565230.1 2239902 D 1335916 CDS YP_008565231.1 544390674 16979808 2241314..2242717 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; signal transduction histidine-protein kinase BaeS 2242717 16979808 LY180_10685 Escherichia coli LY180 signal transduction histidine-protein kinase BaeS YP_008565231.1 2241314 D 1335916 CDS YP_008565232.1 544390675 16979809 2242714..2243436 1 NC_022364.1 response regulator in two-component regulatory system with BaeS; regulator of RNA synthesis, flagellar biosynthesis, chemotaxis and transport; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2243436 16979809 LY180_10690 Escherichia coli LY180 transcriptional regulator YP_008565232.1 2242714 D 1335916 CDS YP_008565233.1 544390676 16979810 2243627..2243959 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2243959 16979810 LY180_10695 Escherichia coli LY180 hypothetical protein YP_008565233.1 2243627 D 1335916 CDS YP_008565234.1 544390677 16979811 2244213..2244464 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; antitoxin 2244464 16979811 LY180_10700 Escherichia coli LY180 antitoxin YP_008565234.1 2244213 D 1335916 CDS YP_008565235.1 544393036 16979812 2244466..2244762 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; plasmid stabilization protein ParE 2244762 16979812 LY180_10705 Escherichia coli LY180 plasmid stabilization protein ParE YP_008565235.1 2244466 D 1335916 CDS YP_008565236.1 544390678 16979813 2244865..2246226 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; protease 2246226 16979813 LY180_10710 Escherichia coli LY180 protease YP_008565236.1 2244865 D 1335916 CDS YP_008565237.1 544390679 16979814 complement(2246499..2246798) 1 NC_022364.1 in E. coli K-12 this is in prophage P2 remnant; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2246798 16979814 LY180_10715 Escherichia coli LY180 transcriptional regulator YP_008565237.1 2246499 R 1335916 CDS YP_008565238.1 544390680 16979815 complement(2246798..2247961) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; late control protein D 2247961 16979815 LY180_10720 Escherichia coli LY180 late control protein D YP_008565238.1 2246798 R 1335916 CDS YP_008565239.1 544390681 16979816 complement(2247961..2248440) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail assembly protein 2248440 16979816 LY180_10725 Escherichia coli LY180 tail assembly protein YP_008565239.1 2247961 R 1335916 CDS YP_008565240.1 544390682 16979817 complement(2248455..2250902) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 2250902 16979817 LY180_10730 Escherichia coli LY180 tail protein YP_008565240.1 2248455 R 1335916 CDS YP_008565241.1 544390683 16979818 complement(2250895..2251050) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 2251050 16979818 LY180_10735 Escherichia coli LY180 tail protein YP_008565241.1 2250895 R 1335916 CDS YP_008565242.1 544390684 16979819 complement(2251047..2251322) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2251322 16979819 LY180_10740 Escherichia coli LY180 hypothetical protein YP_008565242.1 2251047 R 1335916 CDS YP_008565243.1 544390685 16979820 complement(2251379..2251897) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; major tail tube protein 2251897 16979820 LY180_10745 Escherichia coli LY180 major tail tube protein YP_008565243.1 2251379 R 1335916 CDS YP_008565244.1 544390686 16979821 complement(2251910..2253100) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail sheath protein 2253100 16979821 LY180_10750 Escherichia coli LY180 tail sheath protein YP_008565244.1 2251910 R 1335916 CDS YP_008565245.1 544390687 16979822 complement(2253160..2253753) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA invertase 2253753 16979822 LY180_10755 Escherichia coli LY180 DNA invertase YP_008565245.1 2253160 R 1335916 CDS YP_008565246.1 544393037 16979823 2253784..2254197 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2254197 16979823 LY180_10760 Escherichia coli LY180 hypothetical protein YP_008565246.1 2253784 D 1335916 CDS YP_008565247.1 544390688 16979824 2254199..2254639 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2254639 16979824 LY180_10765 Escherichia coli LY180 hypothetical protein YP_008565247.1 2254199 D 1335916 CDS YP_008565248.1 544390689 16979825 complement(2254611..2255204) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail assembly protein 2255204 16979825 LY180_10770 Escherichia coli LY180 tail assembly protein YP_008565248.1 2254611 R 1335916 CDS YP_008565249.1 544393038 16979826 complement(2255204..2256487) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; tail protein 2256487 16979826 LY180_10775 Escherichia coli LY180 tail protein YP_008565249.1 2255204 R 1335916 CDS YP_008565250.1 544390690 16979827 complement(2256484..2257095) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 2257095 16979827 LY180_10780 Escherichia coli LY180 tail protein YP_008565250.1 2256484 R 1335916 CDS YP_008565251.1 544390691 16979828 complement(2257088..2257996) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; baseplate assembly protein 2257996 16979828 LY180_10785 Escherichia coli LY180 baseplate assembly protein YP_008565251.1 2257088 R 1335916 CDS YP_008565252.1 544390692 16979829 complement(2258001..2258348) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; baseplate assembly protein 2258348 16979829 LY180_10790 Escherichia coli LY180 baseplate assembly protein YP_008565252.1 2258001 R 1335916 CDS YP_008565253.1 544390693 16979830 complement(2258345..2258980) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; baseplate assembly protein 2258980 16979830 LY180_10795 Escherichia coli LY180 baseplate assembly protein YP_008565253.1 2258345 R 1335916 CDS YP_008565254.1 544390694 16979831 complement(2259047..2259499) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 2259499 16979831 LY180_10800 Escherichia coli LY180 tail protein YP_008565254.1 2259047 R 1335916 CDS YP_008565255.1 544390695 16979832 complement(2259492..2259959) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail fiber protein 2259959 16979832 LY180_10805 Escherichia coli LY180 tail fiber protein YP_008565255.1 2259492 R 1335916 CDS YP_008565256.1 544393039 16979833 complement(2259922..2260080) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; lysC 2260080 16979833 LY180_10810 Escherichia coli LY180 lysC YP_008565256.1 2259922 R 1335916 CDS YP_008565257.1 544390696 16979834 complement(2260067..2260492) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2260492 16979834 LY180_10815 Escherichia coli LY180 hypothetical protein YP_008565257.1 2260067 R 1335916 CDS YP_008565258.1 544390697 16979835 complement(2260480..2260905) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; protein lysA 2260905 16979835 LY180_10820 Escherichia coli LY180 protein lysA YP_008565258.1 2260480 R 1335916 CDS YP_008565259.1 544390698 16979836 complement(2260920..2261417) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; lysozyme 2261417 16979836 LY180_10825 Escherichia coli LY180 lysozyme YP_008565259.1 2260920 R 1335916 CDS YP_008565260.1 544390699 16979837 complement(2261417..2261698) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; holin 2261698 16979837 LY180_10830 Escherichia coli LY180 holin YP_008565260.1 2261417 R 1335916 CDS YP_008565261.1 544390700 16979838 complement(2261702..2261905) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 2261905 16979838 LY180_10835 Escherichia coli LY180 tail protein YP_008565261.1 2261702 R 1335916 CDS YP_008565262.1 544390701 16979839 complement(2261905..2262414) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Head completion/stabilization protein 2262414 16979839 LY180_10840 Escherichia coli LY180 Head completion/stabilization protein YP_008565262.1 2261905 R 1335916 CDS YP_008565263.1 544390702 16979840 complement(2262514..2263257) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; terminase 2263257 16979840 LY180_10845 Escherichia coli LY180 terminase YP_008565263.1 2262514 R 1335916 CDS YP_008565264.1 544390703 16979841 complement(2263261..2264334) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; capsid protein 2264334 16979841 LY180_10850 Escherichia coli LY180 capsid protein YP_008565264.1 2263261 R 1335916 CDS YP_008565265.1 544390704 16979842 complement(2264393..2265247) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; precorrin-8W decarboxylase 2265247 16979842 LY180_10855 Escherichia coli LY180 precorrin-8W decarboxylase YP_008565265.1 2264393 R 1335916 CDS YP_008565266.1 544390705 16979843 2265421..2267193 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; terminase 2267193 16979843 LY180_10860 Escherichia coli LY180 terminase YP_008565266.1 2265421 D 1335916 CDS YP_008565267.1 544390706 16979844 2267193..2268221 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Presumed portal vertex protein 2268221 16979844 LY180_10865 Escherichia coli LY180 Presumed portal vertex protein YP_008565267.1 2267193 D 1335916 CDS YP_008565268.1 544393040 16979845 complement(2268845..2270278) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; ABC transporter 2270278 16979845 LY180_10870 Escherichia coli LY180 ABC transporter YP_008565268.1 2268845 R 1335916 CDS YP_008565269.1 544390707 16979846 complement(2271443..2273719) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; replication protein 2273719 16979846 LY180_10875 Escherichia coli LY180 replication protein YP_008565269.1 2271443 R 1335916 CDS YP_008565270.1 544393041 16979847 complement(2273709..2273984) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2273984 16979847 LY180_10880 Escherichia coli LY180 hypothetical protein YP_008565270.1 2273709 R 1335916 CDS YP_008565271.1 544390708 16979848 complement(2273981..2274205) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2274205 16979848 LY180_10885 Escherichia coli LY180 hypothetical protein YP_008565271.1 2273981 R 1335916 CDS YP_008565272.1 544390709 16979849 complement(2274208..2274507) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2274507 16979849 LY180_10890 Escherichia coli LY180 hypothetical protein YP_008565272.1 2274208 R 1335916 CDS YP_008565273.1 544393042 16979850 complement(2274738..2275238) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2275238 16979850 LY180_10895 Escherichia coli LY180 hypothetical protein YP_008565273.1 2274738 R 1335916 CDS YP_008565274.1 544390710 16979851 complement(2275235..2275405) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2275405 16979851 LY180_10900 Escherichia coli LY180 hypothetical protein YP_008565274.1 2275235 R 1335916 CDS YP_008565275.1 544390711 16979852 complement(2275416..2275691) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; regulatory protein 2275691 16979852 LY180_10905 Escherichia coli LY180 regulatory protein YP_008565275.1 2275416 R 1335916 CDS YP_008565276.1 544390712 16979853 2275813..2276112 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; repressor 2276112 16979853 LY180_10910 Escherichia coli LY180 repressor YP_008565276.1 2275813 D 1335916 CDS YP_008565277.1 544390713 16979854 2276228..2277241 1 NC_022364.1 Int; binds dsDNA; cleaves and religates DNA through a covalent phosphotyrosine intermediate; bacteriophage P2 Int mediates the site-specific recombination event leading to integration or excision of the phage genome into or out of the Escherichia coli chromosome; integrative recombination occurs between the phage attachment site attP and the bacterial attachment site attB, integrative recombination also requires E. coli IHF; excision requires IHF and the phage-encoded Cox protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; integrase 2277241 16979854 LY180_10915 Escherichia coli LY180 integrase YP_008565277.1 2276228 D 1335916 CDS YP_008565278.1 544393043 16979855 complement(2277506..2277823) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2277823 16979855 LY180_10920 Escherichia coli LY180 hypothetical protein YP_008565278.1 2277506 R 1335916 CDS YP_008565279.1 544390714 16979856 2278229..2279128 1 NC_022364.1 cytosolic protein with phosphatidylglycerol kinase activity; undetermined physiological role; Derived by automated computational analysis using gene prediction method: Protein Homology.; lipid kinase 2279128 16979856 LY180_10925 Escherichia coli LY180 lipid kinase YP_008565279.1 2278229 D 1335916 CDS YP_008565280.1 544390715 16979857 complement(2279210..2279983) 1 NC_022364.1 regulates genes involved in glucitol utilization; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2279983 srlR 16979857 srlR Escherichia coli LY180 transcriptional regulator YP_008565280.1 2279210 R 1335916 CDS YP_008565281.1 544390716 16979858 complement(2280089..2281129) 1 NC_022364.1 Zn-dependent; NAD(P)-binding; catalyzes the formation of tagatose-6-phosphate from galactitol-1-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; galactitol-1-phosphate 5-dehydrogenase 2281129 16979858 LY180_10935 Escherichia coli LY180 galactitol-1-phosphate 5-dehydrogenase YP_008565281.1 2280089 R 1335916 CDS YP_008565282.1 544390717 16979859 complement(2281177..2282532) 1 NC_022364.1 with GatAB forms a phosphoenolpyruvate-dependent sugar phosphotransferase transporter for galactitol; subunit IIC forms the translocation channel and contains the substrate binding site; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS galactitol transporter subunit IIC 2282532 gatC 16979859 gatC Escherichia coli LY180 PTS galactitol transporter subunit IIC YP_008565282.1 2281177 R 1335916 CDS YP_008565283.1 544390718 16979860 complement(2282536..2282820) 1 NC_022364.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS galactitol transporter subunit IIB 2282820 16979860 LY180_10945 Escherichia coli LY180 PTS galactitol transporter subunit IIB YP_008565283.1 2282536 R 1335916 CDS YP_008565284.1 544390719 16979861 complement(2282851..2283303) 1 NC_022364.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS galactitol transporter subunit IIA 2283303 16979861 LY180_10950 Escherichia coli LY180 PTS galactitol transporter subunit IIA YP_008565284.1 2282851 R 1335916 CDS YP_008565285.1 544390720 16979862 complement(2283313..2284575) 1 NC_022364.1 with KbaY catalyzes the formation of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate from tagatose-1,6-bisphosphate; subunit Z may act as a chaperone for the Y subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.; tagatose-bisphosphate aldolase 2284575 16979862 LY180_10955 Escherichia coli LY180 tagatose-bisphosphate aldolase YP_008565285.1 2283313 R 1335916 CDS YP_008565286.1 544390721 16979863 complement(2284604..2285458) 1 NC_022364.1 catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1,6-bisphosphate; in enteric bacteria there are two D-tagatose 1,6-bisphosphate-specific aldolases: KbaY (also called AgaY), involved in catabolism of N-acetyl-galactosamine and D-galactosamine, and GatY which is part of the galactitol catabolism pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.; fructose-bisphosphate aldolase 2285458 gatY 16979863 gatY Escherichia coli LY180 fructose-bisphosphate aldolase YP_008565286.1 2284604 R 1335916 CDS YP_008565287.1 544390722 16979864 complement(2285768..2286820) 1 NC_022364.1 catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; fructose-bisphosphate aldolase 2286820 16979864 LY180_10965 Escherichia coli LY180 fructose-bisphosphate aldolase YP_008565287.1 2285768 R 1335916 CDS YP_008565288.1 544390723 16979865 2287077..2288354 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; nucleoside transporter 2288354 16979865 LY180_10970 Escherichia coli LY180 nucleoside transporter YP_008565288.1 2287077 D 1335916 CDS YP_008565289.1 544390724 16979866 2288351..2289355 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2289355 16979866 LY180_10975 Escherichia coli LY180 hypothetical protein YP_008565289.1 2288351 D 1335916 CDS YP_008565290.1 544390725 16979867 2289352..2290317 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar kinase 2290317 16979867 LY180_10980 Escherichia coli LY180 sugar kinase YP_008565290.1 2289352 D 1335916 CDS YP_008565291.1 544390726 16979868 complement(2290291..2291037) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; GntR family transcriptional regulator 2291037 16979868 LY180_10985 Escherichia coli LY180 GntR family transcriptional regulator YP_008565291.1 2290291 R 1335916 CDS YP_008565292.1 544390727 16979869 complement(2291089..2291907) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2291907 16979869 LY180_10990 Escherichia coli LY180 hypothetical protein YP_008565292.1 2291089 R 1335916 CDS YP_008565293.1 544390728 16979870 complement(2291972..2292772) 1 NC_022364.1 catalyzes the formation hydroxymethylpyrimidine phosphate from hydroxymethylpyrimidine and the formation of of 4-amino-2-methyl-5-diphosphomethylpyrimidine from hydroxymethylpyrimidine phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase 2292772 16979870 LY180_10995 Escherichia coli LY180 bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase YP_008565293.1 2291972 R 1335916 CDS YP_008565294.1 544390729 16979871 complement(2292769..2293557) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hydroxyethylthiazole kinase 2293557 16979871 LY180_11000 Escherichia coli LY180 hydroxyethylthiazole kinase YP_008565294.1 2292769 R 1335916 CDS YP_008565295.1 544390730 16979872 complement(2293780..2294052) 1 NC_022364.1 DNA-binding; binds the RcnA promotor; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2294052 16979872 LY180_11005 Escherichia coli LY180 transcriptional regulator YP_008565295.1 2293780 R 1335916 CDS YP_008565296.1 544390731 16979873 2294173..2294997 1 NC_022364.1 membrane protein conferring nickel and cobalt resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.; cobalt transporter 2294997 16979873 LY180_11010 Escherichia coli LY180 cobalt transporter YP_008565296.1 2294173 D 1335916 CDS YP_008565297.1 544390732 16979874 2295216..2295554 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; nickel/cobalt homeostasis protein RcnB 2295554 16979874 LY180_11015 Escherichia coli LY180 nickel/cobalt homeostasis protein RcnB YP_008565297.1 2295216 D 1335916 CDS YP_008565298.1 544393044 16979875 complement(2295636..2296670) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2296670 16979875 LY180_11020 Escherichia coli LY180 hypothetical protein YP_008565298.1 2295636 R 1335916 CDS YP_008565299.1 544390733 16979876 complement(2296686..2299166) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial outer membrane usher protein 2299166 16979876 LY180_11025 Escherichia coli LY180 fimbrial outer membrane usher protein YP_008565299.1 2296686 R 1335916 CDS YP_008565300.1 544390734 16979877 complement(2299182..2299856) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial assembly chaperone protein StcB 2299856 16979877 LY180_11030 Escherichia coli LY180 fimbrial assembly chaperone protein StcB YP_008565300.1 2299182 R 1335916 CDS YP_008565301.1 544390735 16979878 complement(2299937..2300479) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2300479 16979878 LY180_11035 Escherichia coli LY180 hypothetical protein YP_008565301.1 2299937 R 1335916 CDS YP_008565302.1 544390736 16979879 complement(2300772..2301053) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2301053 16979879 LY180_11040 Escherichia coli LY180 hypothetical protein YP_008565302.1 2300772 R 1335916 CDS YP_008565303.1 544390737 16979880 complement(2301316..2302425) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ATPase 2302425 16979880 LY180_11045 Escherichia coli LY180 ATPase YP_008565303.1 2301316 R 1335916 CDS YP_008565304.1 544390738 16979881 2302557..2304590 1 NC_022364.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; Derived by automated computational analysis using gene prediction method: Protein Homology.; methionyl-tRNA synthetase 2304590 metG 16979881 metG Escherichia coli LY180 methionyl-tRNA synthetase YP_008565304.1 2302557 D 1335916 CDS YP_008565305.1 544393045 16979882 2304731..2308525 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2308525 16979882 LY180_11055 Escherichia coli LY180 hypothetical protein YP_008565305.1 2304731 D 1335916 CDS YP_008565306.1 544390739 16979883 2308535..2312167 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2312167 16979883 LY180_11060 Escherichia coli LY180 hypothetical protein YP_008565306.1 2308535 D 1335916 CDS YP_008565307.1 544393046 16979884 2312228..2312548 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2312548 16979884 LY180_11065 Escherichia coli LY180 hypothetical protein YP_008565307.1 2312228 D 1335916 CDS YP_008565308.1 544393047 16979885 complement(2312601..2312690) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2312690 16979885 LY180_11070 Escherichia coli LY180 hypothetical protein YP_008565308.1 2312601 R 1335916 CDS YP_008565309.1 544393048 16979886 complement(2313209..2313298) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2313298 16979886 LY180_11075 Escherichia coli LY180 hypothetical protein YP_008565309.1 2313209 R 1335916 CDS YP_008565310.1 544390740 16979887 2313731..2314819 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2314819 16979887 LY180_11080 Escherichia coli LY180 hypothetical protein YP_008565310.1 2313731 D 1335916 CDS YP_008565311.1 544390741 16979888 2314830..2317109 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2317109 16979888 LY180_11085 Escherichia coli LY180 hypothetical protein YP_008565311.1 2314830 D 1335916 CDS YP_008565312.1 544390742 16979889 2317102..2318238 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2318238 16979889 LY180_11090 Escherichia coli LY180 hypothetical protein YP_008565312.1 2317102 D 1335916 CDS YP_008565313.1 544390743 16979890 2318235..2320235 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2320235 16979890 LY180_11095 Escherichia coli LY180 hypothetical protein YP_008565313.1 2318235 D 1335916 CDS YP_008565314.1 544390744 16979891 2320360..2320821 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2320821 16979891 LY180_11100 Escherichia coli LY180 hypothetical protein YP_008565314.1 2320360 D 1335916 CDS YP_008565315.1 544390745 16979892 complement(2320861..2321331) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2321331 16979892 LY180_11105 Escherichia coli LY180 hypothetical protein YP_008565315.1 2320861 R 1335916 CDS YP_008565316.1 544390746 16979893 complement(2321378..2322097) 1 NC_022364.1 unknown function; when overproduced it confers drug-resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2322097 16979893 LY180_11110 Escherichia coli LY180 transcriptional regulator YP_008565316.1 2321378 R 1335916 CDS YP_008565317.1 544390747 16979894 complement(2322094..2323779) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sensor histidine kinase 2323779 16979894 LY180_11115 Escherichia coli LY180 sensor histidine kinase YP_008565317.1 2322094 R 1335916 CDS YP_008565318.1 544390748 16979895 2324001..2324732 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; MerR family transcriptional regulator 2324732 16979895 LY180_11120 Escherichia coli LY180 MerR family transcriptional regulator YP_008565318.1 2324001 D 1335916 CDS YP_008565319.1 544390749 16979896 2324792..2324899 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2324899 16979896 LY180_11125 Escherichia coli LY180 membrane protein YP_008565319.1 2324792 D 1335916 CDS YP_008565320.1 544390750 16979897 complement(2324880..2325611) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; osmoprotectant uptake system permease 2325611 16979897 LY180_11130 Escherichia coli LY180 osmoprotectant uptake system permease YP_008565320.1 2324880 R 1335916 CDS YP_008565321.1 544390751 16979898 complement(2325616..2326542) 1 NC_022364.1 with ProWX is involved in the high-affinity uptake of glycine betaine; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycine/betaine ABC transporter ATP-binding protein 2326542 16979898 LY180_11135 Escherichia coli LY180 glycine/betaine ABC transporter ATP-binding protein YP_008565321.1 2325616 R 1335916 CDS YP_008565322.1 544390752 16979899 complement(2326535..2327692) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; osmoprotectant uptake system permease 2327692 16979899 LY180_11140 Escherichia coli LY180 osmoprotectant uptake system permease YP_008565322.1 2326535 R 1335916 CDS YP_008565323.1 544390753 16979900 complement(2327699..2328616) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; osmoprotectant uptake system substrate-binding protein 2328616 16979900 LY180_11145 Escherichia coli LY180 osmoprotectant uptake system substrate-binding protein YP_008565323.1 2327699 R 1335916 CDS YP_008565324.1 544390754 16979901 complement(2328827..2331124) 1 NC_022364.1 catalyzes the hydrolysis of terminal beta-D-glucosyl residues; Derived by automated computational analysis using gene prediction method: Protein Homology.; beta-D-glucoside glucohydrolase 2331124 16979901 LY180_11150 Escherichia coli LY180 beta-D-glucoside glucohydrolase YP_008565324.1 2328827 R 1335916 CDS YP_008565325.1 544390755 16979902 2331320..2333035 1 NC_022364.1 component of the membrane-bound D-lactate oxidase, FAD-binding, NADH independent; Derived by automated computational analysis using gene prediction method: Protein Homology.; D-lactate dehydrogenase 2333035 16979902 LY180_11155 Escherichia coli LY180 D-lactate dehydrogenase YP_008565325.1 2331320 D 1335916 CDS YP_008565326.1 544390756 16979903 complement(2333073..2334005) 1 NC_022364.1 specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi; Penicillin-binding protein 7; Derived by automated computational analysis using gene prediction method: Protein Homology.; D-alanyl-D-alanine endopeptidase 2334005 pbpG 16979903 pbpG Escherichia coli LY180 D-alanyl-D-alanine endopeptidase YP_008565326.1 2333073 R 1335916 CDS YP_008565327.1 544390757 16979904 complement(2334179..2334766) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2334766 16979904 LY180_11165 Escherichia coli LY180 membrane protein YP_008565327.1 2334179 R 1335916 CDS YP_008565328.1 544390758 16979905 2334936..2335514 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2335514 16979905 LY180_11170 Escherichia coli LY180 membrane protein YP_008565328.1 2334936 D 1335916 CDS YP_008565329.1 544390759 16979906 complement(2335644..2336405) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase 2336405 16979906 LY180_11175 Escherichia coli LY180 oxidoreductase YP_008565329.1 2335644 R 1335916 CDS YP_008565330.1 544393049 16979908 2338118..2338201 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 2338201 16979908 LY180_11185 Escherichia coli LY180 membrane protein YP_008565330.1 2338118 D 1335916 CDS YP_008565331.1 544390760 16979909 complement(2338589..2339539) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA-dihydrouridine synthase C 2339539 16979909 LY180_11190 Escherichia coli LY180 tRNA-dihydrouridine synthase C YP_008565331.1 2338589 R 1335916 CDS YP_008565332.1 544390761 16979910 2339778..2340176 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2340176 16979910 LY180_11195 Escherichia coli LY180 hypothetical protein YP_008565332.1 2339778 D 1335916 CDS YP_008565333.1 544390762 16979911 2340173..2340868 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2340868 16979911 LY180_11200 Escherichia coli LY180 membrane protein YP_008565333.1 2340173 D 1335916 CDS YP_008565334.1 544390763 16979912 2340998..2341882 1 NC_022364.1 Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; cytidine deaminase 2341882 16979912 LY180_11205 Escherichia coli LY180 cytidine deaminase YP_008565334.1 2340998 D 1335916 CDS YP_008565335.1 544390764 16979913 2342032..2342751 1 NC_022364.1 involved in vancomycin sensitivity and other barrier functions of the cell envelope; Derived by automated computational analysis using gene prediction method: Protein Homology.; vancomycin high temperature exclusion protein 2342751 16979913 LY180_11210 Escherichia coli LY180 vancomycin high temperature exclusion protein YP_008565335.1 2342032 D 1335916 CDS YP_008565336.1 544390765 16979914 2342754..2342993 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2342993 16979914 LY180_11215 Escherichia coli LY180 hypothetical protein YP_008565336.1 2342754 D 1335916 CDS YP_008565337.1 544390766 16979915 2343312..2344550 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; dihydropyrimidine dehydrogenase subunit A 2344550 16979915 LY180_11220 Escherichia coli LY180 dihydropyrimidine dehydrogenase subunit A YP_008565337.1 2343312 D 1335916 CDS YP_008565338.1 544390767 16979916 2344544..2345779 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; dihydropyrimidine dehydrogenase subunit B 2345779 16979916 LY180_11225 Escherichia coli LY180 dihydropyrimidine dehydrogenase subunit B YP_008565338.1 2344544 D 1335916 CDS YP_008565339.1 544390768 16979917 complement(2345850..2346860) 1 NC_022364.1 ABC transporter; functions in galactose transport; part of MglA2C2B transporter complex; Derived by automated computational analysis using gene prediction method: Protein Homology.; beta-methylgalactoside transporter 2346860 mglC 16979917 mglC Escherichia coli LY180 beta-methylgalactoside transporter YP_008565339.1 2345850 R 1335916 CDS YP_008565340.1 544390769 16979918 complement(2346876..2348396) 1 NC_022364.1 with RbsBCD acts to import ribose into the cell; RbsA contains 2 ATP-binding domain; Derived by automated computational analysis using gene prediction method: Protein Homology.; D-ribose transporter ATP binding protein 2348396 16979918 LY180_11235 Escherichia coli LY180 D-ribose transporter ATP binding protein YP_008565340.1 2346876 R 1335916 CDS YP_008565341.1 544390770 16979919 complement(2348457..2349455) 1 NC_022364.1 wtih MglAC is involved in the transport of beta-methylgalactoside; Derived by automated computational analysis using gene prediction method: Protein Homology.; methyl-galactoside ABC transporter substrate-binding protein 2349455 16979919 LY180_11240 Escherichia coli LY180 methyl-galactoside ABC transporter substrate-binding protein YP_008565341.1 2348457 R 1335916 CDS YP_008565342.1 544390771 16979920 complement(2349735..2350775) 1 NC_022364.1 controls transcription of galETKM; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2350775 16979920 LY180_11245 Escherichia coli LY180 transcriptional regulator YP_008565342.1 2349735 R 1335916 CDS YP_008565343.1 544390772 16979921 complement(2350917..2352074) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2352074 16979921 LY180_11250 Escherichia coli LY180 membrane protein YP_008565343.1 2350917 R 1335916 CDS YP_008565344.1 544390773 16979922 complement(2352091..2352759) 1 NC_022364.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; Derived by automated computational analysis using gene prediction method: Protein Homology.; GTP cyclohydrolase I 2352759 16979922 LY180_11255 Escherichia coli LY180 GTP cyclohydrolase I YP_008565344.1 2352091 R 1335916 CDS YP_008565345.1 544390774 16979923 2353017..2353853 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; S-formylglutathione hydrolase 2353853 16979923 LY180_11260 Escherichia coli LY180 S-formylglutathione hydrolase YP_008565345.1 2353017 D 1335916 CDS YP_008565346.1 544390775 16979924 complement(2353885..2355876) 1 NC_022364.1 Cir; FeuA; CirA; receptor protein for siderophores (colicin IA, IB and V) and microcins (E492, H47, and M); TonB-dependent; able to transport monomers, dimer, and linear trimers of 2,3-dihydorxybenzoylserine; outer membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; catecholate siderophore receptor CirA 2355876 16979924 LY180_11265 Escherichia coli LY180 catecholate siderophore receptor CirA YP_008565346.1 2353885 R 1335916 CDS YP_008565347.1 544390776 16979925 complement(2356169..2357638) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; lysine transporter 2357638 16979925 LY180_11270 Escherichia coli LY180 lysine transporter YP_008565347.1 2356169 R 1335916 CDS YP_008565348.1 544390777 16979926 complement(2357843..2358724) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2358724 16979926 LY180_11275 Escherichia coli LY180 transcriptional regulator YP_008565348.1 2357843 R 1335916 CDS YP_008565349.1 544390778 16979927 2358823..2359872 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2359872 16979927 LY180_11280 Escherichia coli LY180 membrane protein YP_008565349.1 2358823 D 1335916 CDS YP_008565350.1 544390779 16979928 2359946..2360803 1 NC_022364.1 Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues; Derived by automated computational analysis using gene prediction method: Protein Homology.; endonuclease V 2360803 16979928 LY180_11285 Escherichia coli LY180 endonuclease V YP_008565350.1 2359946 D 1335916 CDS YP_008565351.1 544390780 16979929 2360806..2361894 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; carbohydrate kinase 2361894 16979929 LY180_11290 Escherichia coli LY180 carbohydrate kinase YP_008565351.1 2360806 D 1335916 CDS YP_008565352.1 544390781 16979930 complement(2361950..2363200) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; nucleoside permease 2363200 16979930 LY180_11295 Escherichia coli LY180 nucleoside permease YP_008565352.1 2361950 R 1335916 CDS YP_008565353.1 544390782 16979931 complement(2363300..2364241) 1 NC_022364.1 Hydrolyzes cytidine or uridine to ribose and cytosine or uracil, respectively; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonucleoside hydrolase 2364241 rihB 16979931 rihB Escherichia coli LY180 ribonucleoside hydrolase YP_008565353.1 2363300 R 1335916 CDS YP_008565354.1 544390783 16979932 2364410..2365069 1 NC_022364.1 activator of nucleoside metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.; Crp/Fnr family transcriptional regulator 2365069 16979932 LY180_11305 Escherichia coli LY180 Crp/Fnr family transcriptional regulator YP_008565354.1 2364410 D 1335916 CDS YP_008565355.1 544390784 16979933 complement(2365137..2366387) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; nucleoside permease 2366387 16979933 LY180_11310 Escherichia coli LY180 nucleoside permease YP_008565355.1 2365137 R 1335916 CDS YP_008565356.1 544390785 16979934 complement(2366481..2367419) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; pseudouridine-5'-phosphate glycosidase 2367419 16979934 LY180_11315 Escherichia coli LY180 pseudouridine-5'-phosphate glycosidase YP_008565356.1 2366481 R 1335916 CDS YP_008565357.1 544390786 16979935 complement(2367407..2368348) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; pseudouridine kinase 2368348 16979935 LY180_11320 Escherichia coli LY180 pseudouridine kinase YP_008565357.1 2367407 R 1335916 CDS YP_008565358.1 544390787 16979936 complement(2368772..2370463) 1 NC_022364.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS fructose transporter subunit IIBC 2370463 16979936 LY180_11325 Escherichia coli LY180 PTS fructose transporter subunit IIBC YP_008565358.1 2368772 R 1335916 CDS YP_008565359.1 544390788 16979937 complement(2370480..2371418) 1 NC_022364.1 converts fructose-1-phosphate and ATP to fructose-1,6-bisphosphate and ADP; highly specific for fructose-1-phopshate; similar to PfkB; forms homodimers; Derived by automated computational analysis using gene prediction method: Protein Homology.; 1-phosphofructokinase 2371418 fruK 16979937 fruK Escherichia coli LY180 1-phosphofructokinase YP_008565359.1 2370480 R 1335916 CDS YP_008565360.1 544390789 16979938 complement(2371418..2372548) 1 NC_022364.1 phosphoenolpyruvate (PEP)-dependent, sugar transporting phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIA is phosphorylated by phospho-HPr which then transfers the phosphoryl group to the IIB component; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS fructose transporter subunit IIA 2372548 16979938 LY180_11335 Escherichia coli LY180 PTS fructose transporter subunit IIA YP_008565360.1 2371418 R 1335916 CDS YP_008565361.1 544390790 16979939 2372916..2374097 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar transporter 2374097 16979939 LY180_11340 Escherichia coli LY180 sugar transporter YP_008565361.1 2372916 D 1335916 CDS YP_008565362.1 544393050 16979940 complement(2374094..2374348) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2374348 16979940 LY180_11345 Escherichia coli LY180 hypothetical protein YP_008565362.1 2374094 R 1335916 CDS YP_008565363.1 544390791 16979941 2374503..2375075 1 NC_022364.1 Stimulates the peptidyltransferase activity of the 70S ribosome and enhances dipeptide synthesis with N-formylmethionyl-tRNA and puromycin in vitro, suggesting its involvement in the formation of the first peptide bond of a protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; elongation factor Ts 2375075 16979941 LY180_11350 Escherichia coli LY180 elongation factor Ts YP_008565363.1 2374503 D 1335916 CDS YP_008565364.1 544390792 16979942 2375298..2376764 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; D-mannonate oxidoreductase 2376764 16979942 LY180_11355 Escherichia coli LY180 D-mannonate oxidoreductase YP_008565364.1 2375298 D 1335916 CDS YP_008565365.1 544390793 16979943 2376882..2377868 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2377868 16979943 LY180_11360 Escherichia coli LY180 hypothetical protein YP_008565365.1 2376882 D 1335916 CDS YP_008565366.1 544390794 16979944 2377907..2378620 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2378620 16979944 LY180_11365 Escherichia coli LY180 membrane protein YP_008565366.1 2377907 D 1335916 CDS YP_008565367.1 544390795 16979945 2379032..2379598 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; endopeptidase 2379598 16979945 LY180_11370 Escherichia coli LY180 endopeptidase YP_008565367.1 2379032 D 1335916 CDS YP_008565368.1 544390796 16979946 2379779..2381335 1 NC_022364.1 involved in resistance to the phages N4 and lambda; Derived by automated computational analysis using gene prediction method: Protein Homology.; phage resistance protein 2381335 16979946 LY180_11375 Escherichia coli LY180 phage resistance protein YP_008565368.1 2379779 D 1335916 CDS YP_008565369.1 544390797 16979947 2381417..2383231 1 NC_022364.1 with YejBEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide ABC transporter substrate-binding protein 2383231 16979947 LY180_11380 Escherichia coli LY180 peptide ABC transporter substrate-binding protein YP_008565369.1 2381417 D 1335916 CDS YP_008565370.1 544390798 16979948 2383232..2384326 1 NC_022364.1 with YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology.; microcin C ABC transporter permease YejB 2384326 16979948 LY180_11385 Escherichia coli LY180 microcin C ABC transporter permease YejB YP_008565370.1 2383232 D 1335916 CDS YP_008565371.1 544390799 16979949 2384326..2385351 1 NC_022364.1 part of the microcin C transport system; Derived by automated computational analysis using gene prediction method: Protein Homology.; microcin C ABC transporter permease 2385351 16979949 LY180_11390 Escherichia coli LY180 microcin C ABC transporter permease YP_008565371.1 2384326 D 1335916 CDS YP_008565372.1 544390800 16979950 2385353..2386942 1 NC_022364.1 with YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology.; microcin C ABC transporter ATP-binding protein YejF 2386942 16979950 LY180_11395 Escherichia coli LY180 microcin C ABC transporter ATP-binding protein YejF YP_008565372.1 2385353 D 1335916 CDS YP_008565373.1 544390801 16979951 complement(2386946..2387290) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2387290 16979951 LY180_11400 Escherichia coli LY180 hypothetical protein YP_008565373.1 2386946 R 1335916 CDS YP_008565374.1 544390802 16979952 complement(2387623..2388813) 1 NC_022364.1 Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug transporter 2388813 16979952 LY180_11405 Escherichia coli LY180 multidrug transporter YP_008565374.1 2387623 R 1335916 CDS YP_008565375.1 544390803 16979953 complement(2388841..2389536) 1 NC_022364.1 catalyzes the synthesis pseudouridine from uracil-516 in 16S ribosomal RNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; 16S rRNA pseudouridylate synthase 2389536 16979953 LY180_11410 Escherichia coli LY180 16S rRNA pseudouridylate synthase YP_008565375.1 2388841 R 1335916 CDS YP_008565376.1 544390804 16979954 2389685..2391445 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2391445 16979954 LY180_11415 Escherichia coli LY180 hypothetical protein YP_008565376.1 2389685 D 1335916 CDS YP_008565377.1 544390805 16979955 2391570..2391854 1 NC_022364.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L25 2391854 16979955 LY180_11420 Escherichia coli LY180 50S ribosomal protein L25 YP_008565377.1 2391570 D 1335916 CDS YP_008565378.1 544390806 16979956 complement(2391993..2393000) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; nucleoid-associated protein NdpA 2393000 16979956 LY180_11425 Escherichia coli LY180 nucleoid-associated protein NdpA YP_008565378.1 2391993 R 1335916 CDS YP_008565379.1 544390807 16979957 2393182..2393409 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2393409 16979957 LY180_11430 Escherichia coli LY180 hypothetical protein YP_008565379.1 2393182 D 1335916 CDS YP_008565380.1 544390808 16979958 2393429..2395189 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2395189 16979958 LY180_11435 Escherichia coli LY180 membrane protein YP_008565380.1 2393429 D 1335916 CDS YP_008565381.1 544390809 16979961 2398355..2399002 1 NC_022364.1 nitrate/nitrite response regulator NarP; NarP is phosphorylated by NarX and NarQ and can activate fdnG and nitrite or nitrate reductase systems; represses expression of other anaerobic genes; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2399002 16979961 LY180_11455 Escherichia coli LY180 transcriptional regulator YP_008565381.1 2398355 D 1335916 CDS YP_008565382.1 544390810 16979962 complement(2399037..2400089) 1 NC_022364.1 cytochrome c-type biogenesis protein; involved in the attachment of heme to cytochrome c; Derived by automated computational analysis using gene prediction method: Protein Homology.; heme lyase subunit CcmH 2400089 16979962 LY180_11460 Escherichia coli LY180 heme lyase subunit CcmH YP_008565382.1 2399037 R 1335916 CDS YP_008565383.1 544390811 16979963 complement(2400086..2400643) 1 NC_022364.1 cytochrome c-type biogenesis thioredoxin; involved in the reduction of disulfide bonds to allow heme bonding; Derived by automated computational analysis using gene prediction method: Protein Homology.; thiol:disulfide interchange protein 2400643 16979963 LY180_11465 Escherichia coli LY180 thiol:disulfide interchange protein YP_008565383.1 2400086 R 1335916 CDS YP_008565384.1 544390812 16979964 complement(2400640..2402583) 1 NC_022364.1 cytochrome c-type biogenesis protein; required for the transfer of heme to apocytochrome c; Derived by automated computational analysis using gene prediction method: Protein Homology.; heme lyase subunit CcmF 2402583 16979964 LY180_11470 Escherichia coli LY180 heme lyase subunit CcmF YP_008565384.1 2400640 R 1335916 CDS YP_008565385.1 544390813 16979965 complement(2402580..2403059) 1 NC_022364.1 CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; cytochrome C biogenesis protein 2403059 16979965 LY180_11475 Escherichia coli LY180 cytochrome C biogenesis protein YP_008565385.1 2402580 R 1335916 CDS YP_008565386.1 544390814 16979966 complement(2403056..2403265) 1 NC_022364.1 is invovled in heme transfer during cytochrome c biogenesis; acts to stabilize CcmC and CcmE; Derived by automated computational analysis using gene prediction method: Protein Homology.; cytochrome C biogenesis protein CcmD 2403265 16979966 LY180_11480 Escherichia coli LY180 cytochrome C biogenesis protein CcmD YP_008565386.1 2403056 R 1335916 CDS YP_008565387.1 544390815 16979967 complement(2403262..2403999) 1 NC_022364.1 with CcmABDE is involved in the transport of protoheme IX; CcmC is required for heme transfer to CcmE; Derived by automated computational analysis using gene prediction method: Protein Homology.; heme ABC transporter permease 2403999 16979967 LY180_11485 Escherichia coli LY180 heme ABC transporter permease YP_008565387.1 2403262 R 1335916 CDS YP_008565388.1 544390816 16979968 complement(2404041..2404703) 1 NC_022364.1 with CcmABCE is involved in the transport of protoheme IX; CcmB is required for the release of holoCcmE from CcmC; Derived by automated computational analysis using gene prediction method: Protein Homology.; heme ABC transporter permease 2404703 16979968 LY180_11490 Escherichia coli LY180 heme ABC transporter permease YP_008565388.1 2404041 R 1335916 CDS YP_008565389.1 544390817 16979969 complement(2404700..2405323) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cytochrome C biogenesis protein CcmA 2405323 16979969 LY180_11495 Escherichia coli LY180 cytochrome C biogenesis protein CcmA YP_008565389.1 2404700 R 1335916 CDS YP_008565390.1 544390818 16979970 complement(2405336..2405938) 1 NC_022364.1 with NapABDFGH functions as a nitrate reductase; NapC functions as an electron shuttle between NapAB and NapGH or quinone; Derived by automated computational analysis using gene prediction method: Protein Homology.; cytochrome C protein NapC 2405938 16979970 LY180_11500 Escherichia coli LY180 cytochrome C protein NapC YP_008565390.1 2405336 R 1335916 CDS YP_008565391.1 544390819 16979971 complement(2405948..2406397) 1 NC_022364.1 small subunit of periplasmic nitrate reductase; receives electrons from the membrane-bound NapC and passes them to NapA; Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrate reductase cytochrome C550 subunit 2406397 napB 16979971 napB Escherichia coli LY180 nitrate reductase cytochrome C550 subunit YP_008565391.1 2405948 R 1335916 CDS YP_008565392.1 544390820 16979972 complement(2406394..2407257) 1 NC_022364.1 part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; Derived by automated computational analysis using gene prediction method: Protein Homology.; quinol dehydrogenase 2407257 napH 16979972 napH Escherichia coli LY180 quinol dehydrogenase YP_008565392.1 2406394 R 1335916 CDS YP_008565393.1 544390821 16979973 complement(2407244..2407939) 1 NC_022364.1 part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; secreted by twin arginine translocation pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.; quinol dehydrogenase 2407939 napG 16979973 napG Escherichia coli LY180 quinol dehydrogenase YP_008565393.1 2407244 R 1335916 CDS YP_008565394.1 544390822 16979974 complement(2407946..2410432) 1 NC_022364.1 periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC; Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrate reductase catalytic subunit 2410432 16979974 LY180_11520 Escherichia coli LY180 nitrate reductase catalytic subunit YP_008565394.1 2407946 R 1335916 CDS YP_008565395.1 544390823 16979975 complement(2410429..2410692) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrate reductase 2410692 16979975 LY180_11525 Escherichia coli LY180 nitrate reductase YP_008565395.1 2410429 R 1335916 CDS YP_008565396.1 544390824 16979976 complement(2410682..2411176) 1 NC_022364.1 Predicted role in electron transfer to the periplasmic nitrate reductase protein NapA; Derived by automated computational analysis using gene prediction method: Protein Homology.; ferredoxin 2411176 16979976 LY180_11530 Escherichia coli LY180 ferredoxin YP_008565396.1 2410682 R 1335916 CDS YP_008565397.1 544390825 16979977 2411585..2412073 1 NC_022364.1 serine protease inhibitor, inhibits trypsin and other proteases; Derived by automated computational analysis using gene prediction method: Protein Homology.; ecotin 2412073 16979977 LY180_11535 Escherichia coli LY180 ecotin YP_008565397.1 2411585 D 1335916 CDS YP_008565398.1 544390826 16979978 complement(2412222..2413868) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; malate:quinone oxidoreductase 2413868 16979978 LY180_11540 Escherichia coli LY180 malate:quinone oxidoreductase YP_008565398.1 2412222 R 1335916 CDS YP_008565399.1 544390827 16979979 complement(2414086..2415729) 1 NC_022364.1 efflux pump for the antibacterial peptide microcin J25; Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug ABC transporter ATP-binding protein 2415729 16979979 LY180_11545 Escherichia coli LY180 multidrug ABC transporter ATP-binding protein YP_008565399.1 2414086 R 1335916 CDS YP_008565400.1 544390828 16979980 complement(2415805..2416455) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; alpha-ketoglutarate-dependent dioxygenase 2416455 16979980 LY180_11550 Escherichia coli LY180 alpha-ketoglutarate-dependent dioxygenase YP_008565400.1 2415805 R 1335916 CDS YP_008565401.1 544390829 16979981 complement(2416455..2417519) 1 NC_022364.1 regulates genes involved in the repair of alkylated DNA; repairs DNA containing 6-O-methylguanine; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2417519 16979981 LY180_11555 Escherichia coli LY180 transcriptional regulator YP_008565401.1 2416455 R 1335916 CDS YP_008565402.1 544390830 16979982 complement(2417593..2418648) 1 NC_022364.1 catalyzes the conversion of aminoimidazole ribotide to the 4-amino-5-hydroxymethyl-2-methyl pyrimidine moiety of thiamine; involved in the maintenance and/or assembly of sulfur clusters; periplasmic lipoporotein anchored to the inner membrane; part of the thiamine pyrophosphate biosynthesis pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.; thiamine biosynthesis lipoprotein ApbE 2418648 16979982 LY180_11560 Escherichia coli LY180 thiamine biosynthesis lipoprotein ApbE YP_008565402.1 2417593 R 1335916 CDS YP_008565403.1 544390831 16979984 2420602..2423274 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphotransfer intermediate protein in two-component regulatory system with RcsBC 2423274 16979984 LY180_11570 Escherichia coli LY180 phosphotransfer intermediate protein in two-component regulatory system with RcsBC YP_008565403.1 2420602 D 1335916 CDS YP_008565404.1 544390832 16979985 2423291..2423941 1 NC_022364.1 two-component response regulator RscB regulates the genes involved in capsule biosynthesis and cell division; probably phosphorylated by RcsC or RcsF; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2423941 16979985 LY180_11575 Escherichia coli LY180 transcriptional regulator YP_008565404.1 2423291 D 1335916 CDS YP_008565405.1 544390833 16979986 complement(2424141..2426990) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sensory histidine kinase 2426990 16979986 LY180_11580 Escherichia coli LY180 sensory histidine kinase YP_008565405.1 2424141 R 1335916 CDS YP_008565406.1 544390834 16979987 complement(2427265..2428041) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2428041 16979987 LY180_11585 Escherichia coli LY180 hypothetical protein YP_008565406.1 2427265 R 1335916 CDS YP_008565407.1 544390835 16979988 complement(2428046..2429695) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2429695 16979988 LY180_11590 Escherichia coli LY180 hypothetical protein YP_008565407.1 2428046 R 1335916 CDS YP_008565408.1 544393051 16979989 complement(2429696..2434210) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2434210 16979989 LY180_11595 Escherichia coli LY180 hypothetical protein YP_008565408.1 2429696 R 1335916 CDS YP_008565409.1 544390836 16979990 complement(2434234..2434857) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2434857 16979990 LY180_11600 Escherichia coli LY180 hypothetical protein YP_008565409.1 2434234 R 1335916 CDS YP_008565410.1 544390837 16979991 complement(2434854..2436542) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2436542 16979991 LY180_11605 Escherichia coli LY180 hypothetical protein YP_008565410.1 2434854 R 1335916 CDS YP_008565411.1 544390838 16979992 complement(2436691..2439318) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA gyrase subunit A 2439318 16979992 LY180_11610 Escherichia coli LY180 DNA gyrase subunit A YP_008565411.1 2436691 R 1335916 CDS YP_008565412.1 544390839 16979993 2439465..2440187 1 NC_022364.1 Involved in ubiquinone biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase 2440187 16979993 LY180_11615 Escherichia coli LY180 bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase YP_008565412.1 2439465 D 1335916 CDS YP_008565413.1 544390840 16979994 complement(2440315..2444055) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; adhesin 2444055 16979994 LY180_11620 Escherichia coli LY180 adhesin YP_008565413.1 2440315 R 1335916 CDS YP_008565414.1 544390841 16979995 2444745..2447030 1 NC_022364.1 Catalyzes the rate-limiting step in dNTP synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonucleotide-diphosphate reductase subunit alpha 2447030 16979995 LY180_11625 Escherichia coli LY180 ribonucleotide-diphosphate reductase subunit alpha YP_008565414.1 2444745 D 1335916 CDS YP_008565415.1 544390842 16979996 2447126..2448307 1 NC_022364.1 B2 or R2 protein; type 1a enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdA; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonucleotide-diphosphate reductase subunit beta 2448307 16979996 LY180_11630 Escherichia coli LY180 ribonucleotide-diphosphate reductase subunit beta YP_008565415.1 2447126 D 1335916 CDS YP_008565416.1 544390843 16979997 2448307..2448561 1 NC_022364.1 plays a role in maintenance and possibly the biosynthesis of diferric-tyrosyl radical cofactor, essential for nucleotide reduction catalyzed by ribonucleotide reductases; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2Fe-2S ferredoxin 2448561 16979997 LY180_11635 Escherichia coli LY180 2Fe-2S ferredoxin YP_008565416.1 2448307 D 1335916 CDS YP_008565417.1 544390844 16979998 complement(2448615..2449265) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2449265 16979998 LY180_11640 Escherichia coli LY180 hypothetical protein YP_008565417.1 2448615 R 1335916 CDS YP_008565418.1 544390845 16979999 complement(2449727..2450803) 1 NC_022364.1 hydrolyzes deacylated phospholipids to glycerol 3-phosphate and the corresponding alcohols; periplasmic; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycerophosphodiester phosphodiesterase 2450803 glpQ 16979999 glpQ Escherichia coli LY180 glycerophosphodiester phosphodiesterase YP_008565418.1 2449727 R 1335916 CDS YP_008565419.1 544390846 16980000 complement(2450808..2452166) 1 NC_022364.1 catalyzes the uptake of glycerol-3-phosphate into the cell with the simultaneous export of inorganic phosphate from the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; sn-glycerol-3-phosphate transporter 2452166 glpT 16980000 glpT Escherichia coli LY180 sn-glycerol-3-phosphate transporter YP_008565419.1 2450808 R 1335916 CDS YP_008565420.1 544390847 16980001 2452439..2454067 1 NC_022364.1 anaerobic, catalyzes the conversion of glycerol 3-phosphate to dihydroxyacetone using fumarate or nitrate as electron acceptor; Derived by automated computational analysis using gene prediction method: Protein Homology.; sn-glycerol-3-phosphate dehydrogenase subunit A 2454067 glpA 16980001 glpA Escherichia coli LY180 sn-glycerol-3-phosphate dehydrogenase subunit A YP_008565420.1 2452439 D 1335916 CDS YP_008565421.1 544390848 16980002 2454057..2455316 1 NC_022364.1 sn-glycerol-3-phosphate dehydrogenase (anaerobic); catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate; part of GlpABC complex; presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycerol-3-phosphate dehydrogenase subunit B 2455316 16980002 LY180_11660 Escherichia coli LY180 glycerol-3-phosphate dehydrogenase subunit B YP_008565421.1 2454057 D 1335916 CDS YP_008565422.1 544390849 16980003 2455313..2456503 1 NC_022364.1 anaerobic; with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; sn-glycerol-3-phosphate dehydrogenase subunit C 2456503 glpC 16980003 glpC Escherichia coli LY180 sn-glycerol-3-phosphate dehydrogenase subunit C YP_008565422.1 2455313 D 1335916 CDS YP_008565423.1 544390850 16980004 2456697..2457599 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2457599 16980004 LY180_11670 Escherichia coli LY180 hypothetical protein YP_008565423.1 2456697 D 1335916 CDS YP_008565424.1 544390851 16980005 complement(2457640..2458110) 1 NC_022364.1 catalyzes the retro-aldol cleavage of 2-keto-3-deoxy-L-rhamnonate to pyruvate and lactaldehyde; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-keto-3-deoxy-L-rhamnonate aldolase 2458110 16980005 LY180_11675 Escherichia coli LY180 2-keto-3-deoxy-L-rhamnonate aldolase YP_008565424.1 2457640 R 1335916 CDS YP_008565425.1 544390852 16980006 complement(2458165..2459367) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2459367 16980006 LY180_11680 Escherichia coli LY180 hypothetical protein YP_008565425.1 2458165 R 1335916 CDS YP_008565426.1 544390853 16980007 complement(2459467..2460009) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2460009 16980007 LY180_11685 Escherichia coli LY180 membrane protein YP_008565426.1 2459467 R 1335916 CDS YP_008565427.1 544390854 16980008 2460288..2460713 1 NC_022364.1 catalyzes the hydrolysis of nucleoside triphosphates; Derived by automated computational analysis using gene prediction method: Protein Homology.; nucleoside triphosphatase NudI 2460713 16980008 LY180_11690 Escherichia coli LY180 nucleoside triphosphatase NudI YP_008565427.1 2460288 D 1335916 CDS YP_008565428.1 544390855 16980009 complement(2460752..2461354) 1 NC_022364.1 catalyzes the of heptose(II) of the outer membrane lipopolysaccharide core; Derived by automated computational analysis using gene prediction method: Protein Homology.; lipopolysaccharide core heptose(II)-phosphate phosphatase 2461354 16980009 LY180_11695 Escherichia coli LY180 lipopolysaccharide core heptose(II)-phosphate phosphatase YP_008565428.1 2460752 R 1335916 CDS YP_008565429.1 544390856 16980010 2461662..2462801 1 NC_022364.1 catalyzes the conversion of UDP-4-keto-arabinose to UDP-4-amino-4-deoxy-L-arabinose; Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase 2462801 16980010 LY180_11700 Escherichia coli LY180 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase YP_008565429.1 2461662 D 1335916 CDS YP_008565430.1 544390857 16980011 2462805..2463773 1 NC_022364.1 catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP phosphate 4-deoxy-4-formamido-L-arabinose transferase 2463773 16980011 LY180_11705 Escherichia coli LY180 UDP phosphate 4-deoxy-4-formamido-L-arabinose transferase YP_008565430.1 2462805 D 1335916 CDS YP_008565431.1 544390858 16980012 2463773..2465755 1 NC_022364.1 Bifunctional polymyxin resistance arnA protein; catalyzes the decarboxylation of UDP-glucuronic acid to UDP-4-keto-arabinose and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose to form UDP-L-4-formamido-arabinose; active in certain mutant strains; Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase 2465755 16980012 LY180_11710 Escherichia coli LY180 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase YP_008565431.1 2463773 D 1335916 CDS YP_008565432.1 544390859 16980013 2465752..2466642 1 NC_022364.1 catalyzes the formation of 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol from 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol; Derived by automated computational analysis using gene prediction method: Protein Homology.; 4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase 2466642 16980013 LY180_11715 Escherichia coli LY180 4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase YP_008565432.1 2465752 D 1335916 CDS YP_008565433.1 544390860 16980014 2466642..2468294 1 NC_022364.1 catalyzes the addition of 4-amino-4-deoxy-L-arabinose to lipid A; Derived by automated computational analysis using gene prediction method: Protein Homology.; 4-amino-4-deoxy-L-arabinose transferase 2468294 arnT 16980014 arnT Escherichia coli LY180 4-amino-4-deoxy-L-arabinose transferase YP_008565433.1 2466642 D 1335916 CDS YP_008565434.1 544390861 16980015 2468291..2468626 1 NC_022364.1 with ArnE is involved in transporting 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol from the cytoplasmic face to the periplasmic face of the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase subunit E 2468626 16980015 LY180_11725 Escherichia coli LY180 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase subunit E YP_008565434.1 2468291 D 1335916 CDS YP_008565435.1 544390862 16980016 2468626..2469012 1 NC_022364.1 with ArnE is responsible for the transport of 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol from the cytoplasm to the periplasm; Derived by automated computational analysis using gene prediction method: Protein Homology.; 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase subunit F 2469012 16980016 LY180_11730 Escherichia coli LY180 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase subunit F YP_008565435.1 2468626 D 1335916 CDS YP_008565436.1 544390863 16980017 complement(2469006..2469272) 1 NC_022364.1 with BasR regulates genes involved in polymyxin resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.; signal transduction protein PmrD 2469272 16980017 LY180_11735 Escherichia coli LY180 signal transduction protein PmrD YP_008565436.1 2469006 R 1335916 CDS YP_008565437.1 544390864 16980018 complement(2469382..2470737) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; O-succinylbenzoic acid--CoA ligase 2470737 16980018 LY180_11740 Escherichia coli LY180 O-succinylbenzoic acid--CoA ligase YP_008565437.1 2469382 R 1335916 CDS YP_008565438.1 544390865 16980019 complement(2470734..2471696) 1 NC_022364.1 catalyzes the dehydration of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate; Derived by automated computational analysis using gene prediction method: Protein Homology.; O-succinylbenzoate synthase 2471696 16980019 LY180_11745 Escherichia coli LY180 O-succinylbenzoate synthase YP_008565438.1 2470734 R 1335916 CDS YP_008565439.1 544390866 16980020 complement(2471696..2472553) 1 NC_022364.1 catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.; dihydroxynaphthoic acid synthetase 2472553 16980020 LY180_11750 Escherichia coli LY180 dihydroxynaphthoic acid synthetase YP_008565439.1 2471696 R 1335916 CDS YP_008565440.1 544390867 16980021 complement(2472568..2473326) 1 NC_022364.1 catalyzes the formation of (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate in menaquinone biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 2473326 16980021 LY180_11755 Escherichia coli LY180 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase YP_008565440.1 2472568 R 1335916 CDS YP_008565441.1 544390868 16980022 complement(2473323..2474993) 1 NC_022364.1 SEPHCHC synthase; forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1- carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase 2474993 16980022 LY180_11760 Escherichia coli LY180 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase YP_008565441.1 2473323 R 1335916 CDS YP_008565442.1 544390869 16980023 complement(2475082..2476377) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; isochorismate synthase 2476377 16980023 LY180_11765 Escherichia coli LY180 isochorismate synthase YP_008565442.1 2475082 R 1335916 CDS YP_008565443.1 544390870 16980024 complement(2476456..2476761) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2476761 16980024 LY180_11770 Escherichia coli LY180 membrane protein YP_008565443.1 2476456 R 1335916 CDS YP_008565444.1 544390871 16980025 complement(2476816..2477277) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acyltransferase 2477277 16980025 LY180_11775 Escherichia coli LY180 acyltransferase YP_008565444.1 2476816 R 1335916 CDS YP_008565445.1 544390872 16980026 2477324..2478259 1 NC_022364.1 RNase BN; member of metallo-beta-lactamase family; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonuclease Z 2478259 16980026 LY180_11780 Escherichia coli LY180 ribonuclease Z YP_008565445.1 2477324 D 1335916 CDS YP_008565446.1 544390873 16980027 2478447..2479667 1 NC_022364.1 ElaD; specific cysteine protease which targets ubiquitin and ubiquitin-like proteins covalently bound to target proteins; SseL in Salmonella is required for macrophage killing and virulence, and it is secreted by the salmonella pathogenicity island 2 type III secretion system; Derived by automated computational analysis using gene prediction method: Protein Homology.; deubiquitinase 2479667 16980027 LY180_11785 Escherichia coli LY180 deubiquitinase YP_008565446.1 2478447 D 1335916 CDS YP_008565447.1 544390874 16980028 2480789..2481292 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2481292 16980028 LY180_11790 Escherichia coli LY180 hypothetical protein YP_008565447.1 2480789 D 1335916 CDS YP_008565448.1 544390875 16980029 complement(2481359..2482816) 1 NC_022364.1 Catalyzes the transfer of electrons from NADH to quinone; Derived by automated computational analysis using gene prediction method: Protein Homology.; NADH:ubiquinone oxidoreductase subunit N 2482816 16980029 LY180_11795 Escherichia coli LY180 NADH:ubiquinone oxidoreductase subunit N YP_008565448.1 2481359 R 1335916 CDS YP_008565449.1 544390876 16980030 complement(2482823..2484352) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; NADH:ubiquinone oxidoreductase subunit M 2484352 16980030 LY180_11800 Escherichia coli LY180 NADH:ubiquinone oxidoreductase subunit M YP_008565449.1 2482823 R 1335916 CDS YP_008565450.1 544390877 16980031 complement(2484516..2486357) 1 NC_022364.1 Catalyzes the transfer of electrons from NADH to ubiquinone; Derived by automated computational analysis using gene prediction method: Protein Homology.; NADH:ubiquinone oxidoreductase subunit L 2486357 16980031 LY180_11805 Escherichia coli LY180 NADH:ubiquinone oxidoreductase subunit L YP_008565450.1 2484516 R 1335916 CDS YP_008565451.1 544390878 16980032 complement(2486354..2486656) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; NADH:ubiquinone oxidoreductase subunit K 2486656 16980032 LY180_11810 Escherichia coli LY180 NADH:ubiquinone oxidoreductase subunit K YP_008565451.1 2486354 R 1335916 CDS YP_008565452.1 544390879 16980033 complement(2486653..2487207) 1 NC_022364.1 Catalyzes the transfer of electrons from NADH to quinone; Derived by automated computational analysis using gene prediction method: Protein Homology.; NADH:ubiquinone oxidoreductase subunit J 2487207 16980033 LY180_11815 Escherichia coli LY180 NADH:ubiquinone oxidoreductase subunit J YP_008565452.1 2486653 R 1335916 CDS YP_008565453.1 544390880 16980034 complement(2487219..2487761) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; NADH dehydrogenase subunit I 2487761 16980034 LY180_11820 Escherichia coli LY180 NADH dehydrogenase subunit I YP_008565453.1 2487219 R 1335916 CDS YP_008565454.1 544390881 16980035 complement(2487776..2488753) 1 NC_022364.1 Catalyzes the transfer of electrons from NADH to quinone; Derived by automated computational analysis using gene prediction method: Protein Homology.; NADH:ubiquinone oxidoreductase subunit H 2488753 16980035 LY180_11825 Escherichia coli LY180 NADH:ubiquinone oxidoreductase subunit H YP_008565454.1 2487776 R 1335916 CDS YP_008565455.1 544390882 16980036 complement(2488750..2491476) 1 NC_022364.1 Catalyzes the transfer of electrons from NADH to quinone; Derived by automated computational analysis using gene prediction method: Protein Homology.; NADH dehydrogenase subunit G 2491476 16980036 LY180_11830 Escherichia coli LY180 NADH dehydrogenase subunit G YP_008565455.1 2488750 R 1335916 CDS YP_008565456.1 544390883 16980037 complement(2491529..2492866) 1 NC_022364.1 part of NADH-ubiquinone oxidoreductase complex I; shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.; NADH dehydrogenase subunit F 2492866 16980037 LY180_11835 Escherichia coli LY180 NADH dehydrogenase subunit F YP_008565456.1 2491529 R 1335916 CDS YP_008565457.1 544390884 16980038 complement(2492863..2493363) 1 NC_022364.1 Catalyzes the transfer of electrons from NADH to quinone; Derived by automated computational analysis using gene prediction method: Protein Homology.; NADH dehydrogenase subunit E 2493363 16980038 LY180_11840 Escherichia coli LY180 NADH dehydrogenase subunit E YP_008565457.1 2492863 R 1335916 CDS YP_008565458.1 544390885 16980039 complement(2493366..2495168) 1 NC_022364.1 NuoCD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; subunits NuoCD, E, F, and G constitute the peripheral sector of the complex; in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms; Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional NADH:ubiquinone oxidoreductase subunit C/D 2495168 16980039 LY180_11845 Escherichia coli LY180 bifunctional NADH:ubiquinone oxidoreductase subunit C/D YP_008565458.1 2493366 R 1335916 CDS YP_008565459.1 544390886 16980040 complement(2495262..2495924) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; NADH dehydrogenase subunit B 2495924 16980040 LY180_11850 Escherichia coli LY180 NADH dehydrogenase subunit B YP_008565459.1 2495262 R 1335916 CDS YP_008565460.1 544390887 16980041 complement(2495940..2496383) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; NADH:ubiquinone oxidoreductase subunit A 2496383 16980041 LY180_11855 Escherichia coli LY180 NADH:ubiquinone oxidoreductase subunit A YP_008565460.1 2495940 R 1335916 CDS YP_008565461.1 544390888 16980042 complement(2497014..2497952) 1 NC_022364.1 involved in the regulation of genes involved in flagella synthesis, motility and chemotaxis; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2497952 16980042 LY180_11860 Escherichia coli LY180 transcriptional regulator YP_008565461.1 2497014 R 1335916 CDS YP_008565462.1 544390889 16980043 2498872..2500089 1 NC_022364.1 broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; Derived by automated computational analysis using gene prediction method: Protein Homology.; aminotransferase AlaT 2500089 16980043 LY180_11865 Escherichia coli LY180 aminotransferase AlaT YP_008565462.1 2498872 D 1335916 CDS YP_008565463.1 544390890 16980044 2500173..2500772 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 5'-nucleotidase 2500772 16980044 LY180_11870 Escherichia coli LY180 5'-nucleotidase YP_008565463.1 2500173 D 1335916 CDS YP_008565464.1 544390891 16980045 complement(2500831..2502663) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; citrate transporter 2502663 16980045 LY180_11875 Escherichia coli LY180 citrate transporter YP_008565464.1 2500831 R 1335916 CDS YP_008565465.1 544390892 16980046 complement(2502750..2503400) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphatase 2503400 16980046 LY180_11880 Escherichia coli LY180 phosphatase YP_008565465.1 2502750 R 1335916 CDS YP_008565466.1 544390893 16980047 complement(2503411..2503905) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2503905 16980047 LY180_11885 Escherichia coli LY180 hypothetical protein YP_008565466.1 2503411 R 1335916 CDS YP_008565467.1 544390894 16980048 complement(2503988..2504443) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2504443 16980048 LY180_11890 Escherichia coli LY180 membrane protein YP_008565467.1 2503988 R 1335916 CDS YP_008565468.1 544393052 16980049 complement(2504512..2504643) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2504643 16980049 LY180_11895 Escherichia coli LY180 hypothetical protein YP_008565468.1 2504512 R 1335916 CDS YP_008565469.1 544390895 16980051 2506156..2508300 1 NC_022364.1 catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphate acetyltransferase 2508300 16980051 LY180_11905 Escherichia coli LY180 phosphate acetyltransferase YP_008565469.1 2506156 D 1335916 CDS YP_008565470.1 544390896 16980052 2508490..2510010 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2510010 16980052 LY180_11910 Escherichia coli LY180 membrane protein YP_008565470.1 2508490 D 1335916 CDS YP_008565471.1 544390897 16980053 complement(2510043..2510585) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; NUDIX hydrolase 2510585 16980053 LY180_11915 Escherichia coli LY180 NUDIX hydrolase YP_008565471.1 2510043 R 1335916 CDS YP_008565472.1 544390898 16980054 complement(2510643..2511194) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphodiesterase 2511194 16980054 LY180_11920 Escherichia coli LY180 phosphodiesterase YP_008565472.1 2510643 R 1335916 CDS YP_008565473.1 544390899 16980055 complement(2511250..2511894) 1 NC_022364.1 catalyzes the formation of 2,4-dinitrophenyl-S-glutathione from 1-chloro-2,4-dinitrobenzene and glutathione; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutathione S-transferase 2511894 16980055 LY180_11925 Escherichia coli LY180 glutathione S-transferase YP_008565473.1 2511250 R 1335916 CDS YP_008565474.1 544390900 16980056 2512030..2512677 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; GSH-dependent disulfide bond oxidoreductase 2512677 16980056 LY180_11930 Escherichia coli LY180 GSH-dependent disulfide bond oxidoreductase YP_008565474.1 2512030 D 1335916 CDS YP_008565475.1 544390901 16980057 2512734..2513096 1 NC_022364.1 catalyzes the formation of dihydromonapterin triphosphate from dihydroneopterin triphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase 2513096 folX 16980057 folX Escherichia coli LY180 D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase YP_008565475.1 2512734 D 1335916 CDS YP_008565476.1 544390902 16980058 2513117..2514010 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; epimerase 2514010 16980058 LY180_11940 Escherichia coli LY180 epimerase YP_008565476.1 2513117 D 1335916 CDS YP_008565477.1 544390903 16980059 complement(2514058..2514948) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transposase 2514948 16980059 LY180_11945 Escherichia coli LY180 transposase YP_008565477.1 2514058 R 1335916 CDS YP_008565478.1 544390904 16980060 complement(2515145..2515918) 1 NC_022364.1 similar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutamine ABC transporter ATP-binding protein 2515918 glnQ 16980060 glnQ Escherichia coli LY180 glutamine ABC transporter ATP-binding protein YP_008565478.1 2515145 R 1335916 CDS YP_008565479.1 544390905 16980061 complement(2515926..2516642) 1 NC_022364.1 with HisJPQ is involved in transport of histidine, lysine, arginine and ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology.; histidine/lysine/arginine/ornithine ABC transporter permease HisM 2516642 16980061 LY180_11955 Escherichia coli LY180 histidine/lysine/arginine/ornithine ABC transporter permease HisM YP_008565479.1 2515926 R 1335916 CDS YP_008565480.1 544390906 16980062 complement(2516639..2517325) 1 NC_022364.1 with HisJMP is involved in the transport of histidine/lysine/arginine/ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology.; histidine/lysine/arginine/ornithine ABC transporter permease HisQ 2517325 16980062 LY180_11960 Escherichia coli LY180 histidine/lysine/arginine/ornithine ABC transporter permease HisQ YP_008565480.1 2516639 R 1335916 CDS YP_008565481.1 544390907 16980063 complement(2517415..2518197) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; zinc transporter 2518197 16980063 LY180_11965 Escherichia coli LY180 zinc transporter YP_008565481.1 2517415 R 1335916 CDS YP_008565482.1 544390908 16980064 complement(2518418..2519200) 1 NC_022364.1 with HisPMQ is involved in the transport of histidine; Derived by automated computational analysis using gene prediction method: Protein Homology.; amino acid ABC transporter substrate-binding protein 2519200 16980064 LY180_11970 Escherichia coli LY180 amino acid ABC transporter substrate-binding protein YP_008565482.1 2518418 R 1335916 CDS YP_008565483.1 544390909 16980065 complement(2519466..2520035) 1 NC_022364.1 catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 2520035 16980065 LY180_11975 Escherichia coli LY180 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_008565483.1 2519466 R 1335916 CDS YP_008565484.1 544390910 16980066 complement(2520130..2521647) 1 NC_022364.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.; amidophosphoribosyltransferase 2521647 16980066 LY180_11980 Escherichia coli LY180 amidophosphoribosyltransferase YP_008565484.1 2520130 R 1335916 CDS YP_008565485.1 544390911 16980067 complement(2521684..2522172) 1 NC_022364.1 membrane protein required for colicin V production; Derived by automated computational analysis using gene prediction method: Protein Homology.; colicin V production protein 2522172 16980067 LY180_11985 Escherichia coli LY180 colicin V production protein YP_008565485.1 2521684 R 1335916 CDS YP_008565486.1 544390912 16980068 complement(2522431..2523093) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division protein DedD 2523093 16980068 LY180_11990 Escherichia coli LY180 cell division protein DedD YP_008565486.1 2522431 R 1335916 CDS YP_008565487.1 544390913 16980069 complement(2523083..2524351) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 2524351 16980069 LY180_11995 Escherichia coli LY180 bifunctional folylpolyglutamate synthase/ dihydrofolate synthase YP_008565487.1 2523083 R 1335916 CDS YP_008565488.1 544390914 16980070 complement(2524421..2525335) 1 NC_022364.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; Derived by automated computational analysis using gene prediction method: Protein Homology.; acetyl-CoA carboxylase subunit beta 2525335 16980070 LY180_12000 Escherichia coli LY180 acetyl-CoA carboxylase subunit beta YP_008565488.1 2524421 R 1335916 CDS YP_008565489.1 544390915 16980071 complement(2525491..2526150) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2526150 16980071 LY180_12005 Escherichia coli LY180 membrane protein YP_008565489.1 2525491 R 1335916 CDS YP_008565490.1 544390916 16980072 complement(2526233..2527045) 1 NC_022364.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA pseudouridine synthase A 2527045 truA 16980072 truA Escherichia coli LY180 tRNA pseudouridine synthase A YP_008565490.1 2526233 R 1335916 CDS YP_008565491.1 544390917 16980073 complement(2527045..2528058) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; semialdehyde dehydrogenase 2528058 16980073 LY180_12015 Escherichia coli LY180 semialdehyde dehydrogenase YP_008565491.1 2527045 R 1335916 CDS YP_008565492.1 544390918 16980074 complement(2528124..2529260) 1 NC_022364.1 catalyzes the formation of 3-hydroxy-2-oxo-4-phosphonooxybutanoate from erythronate-4-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; erythronate-4-phosphate dehydrogenase 2529260 16980074 LY180_12020 Escherichia coli LY180 erythronate-4-phosphate dehydrogenase YP_008565492.1 2528124 R 1335916 CDS YP_008565493.1 544390919 16980075 2529359..2530354 1 NC_022364.1 in Salmonella typhimurium Flk regulates flagellar biosynthesis by inhibition of the flagellar-associated type III secretion system; lowers secretion levels of the anti-sigma28 factor FlgM to the periplasm; inner membrane-anchored protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagella biosynthesis regulator 2530354 flk 16980075 flk Escherichia coli LY180 flagella biosynthesis regulator YP_008565493.1 2529359 D 1335916 CDS YP_008565494.1 544390920 16980076 complement(2530351..2531529) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 2531529 16980076 LY180_12030 Escherichia coli LY180 transporter YP_008565494.1 2530351 R 1335916 CDS YP_008565495.1 544390921 16980077 complement(2531840..2533060) 1 NC_022364.1 FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-oxoacyl-ACP synthase 2533060 16980077 LY180_12035 Escherichia coli LY180 3-oxoacyl-ACP synthase YP_008565495.1 2531840 R 1335916 CDS YP_008565496.1 544390922 16980078 2533219..2535225 1 NC_022364.1 5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase/FAD-dependent demodification enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA methyltransferase 2535225 mnmC 16980078 mnmC Escherichia coli LY180 tRNA methyltransferase YP_008565496.1 2533219 D 1335916 CDS YP_008565497.1 544390923 16980079 complement(2535346..2535624) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2535624 16980079 LY180_12045 Escherichia coli LY180 hypothetical protein YP_008565497.1 2535346 R 1335916 CDS YP_008565498.1 544390924 16980080 complement(2535658..2536206) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2536206 16980080 LY180_12050 Escherichia coli LY180 hypothetical protein YP_008565498.1 2535658 R 1335916 CDS YP_008565499.1 544390925 16980081 complement(2536206..2537015) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2537015 16980081 LY180_12055 Escherichia coli LY180 membrane protein YP_008565499.1 2536206 R 1335916 CDS YP_008565500.1 544390926 16980082 complement(2537015..2537839) 1 NC_022364.1 D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in periplasm; Derived by automated computational analysis using gene prediction method: Protein Homology.; penicillin-insensitive murein endopeptidase 2537839 mepA 16980082 mepA Escherichia coli LY180 penicillin-insensitive murein endopeptidase YP_008565500.1 2537015 R 1335916 CDS YP_008565501.1 544390927 16980083 complement(2537843..2538928) 1 NC_022364.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; chorismate synthase 2538928 16980083 LY180_12065 Escherichia coli LY180 chorismate synthase YP_008565501.1 2537843 R 1335916 CDS YP_008565502.1 544390928 16980084 complement(2538963..2539895) 1 NC_022364.1 involved in methylation of ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 2539895 16980084 LY180_12070 Escherichia coli LY180 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase YP_008565502.1 2538963 R 1335916 CDS YP_008565503.1 544390929 16980085 2540061..2540612 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidase S10 2540612 16980085 LY180_12075 Escherichia coli LY180 peptidase S10 YP_008565503.1 2540061 D 1335916 CDS YP_008565504.1 544390930 16980086 complement(2540734..2541606) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein 2541606 16980086 LY180_12080 Escherichia coli LY180 fimbrial protein YP_008565504.1 2540734 R 1335916 CDS YP_008565505.1 544390931 16980087 complement(2541593..2542117) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein 2542117 16980087 LY180_12085 Escherichia coli LY180 fimbrial protein YP_008565505.1 2541593 R 1335916 CDS YP_008565506.1 544390932 16980088 complement(2542114..2542584) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein SteE 2542584 16980088 LY180_12090 Escherichia coli LY180 fimbrial protein SteE YP_008565506.1 2542114 R 1335916 CDS YP_008565507.1 544390933 16980089 complement(2542581..2543129) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein 2543129 16980089 LY180_12095 Escherichia coli LY180 fimbrial protein YP_008565507.1 2542581 R 1335916 CDS YP_008565508.1 544390934 16980090 complement(2543104..2543856) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein StfD 2543856 16980090 LY180_12100 Escherichia coli LY180 fimbrial protein StfD YP_008565508.1 2543104 R 1335916 CDS YP_008565509.1 544390935 16980091 complement(2543876..2546518) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein SteB 2546518 16980091 LY180_12105 Escherichia coli LY180 fimbrial protein SteB YP_008565509.1 2543876 R 1335916 CDS YP_008565510.1 544390936 16980092 complement(2546600..2547163) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein 2547163 16980092 LY180_12110 Escherichia coli LY180 fimbrial protein YP_008565510.1 2546600 R 1335916 CDS YP_008565511.1 544390937 16980093 complement(2547838..2548323) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphohistidine phosphatase 2548323 16980093 LY180_12115 Escherichia coli LY180 phosphohistidine phosphatase YP_008565511.1 2547838 R 1335916 CDS YP_008565512.1 544390938 16980094 complement(2548526..2550670) 1 NC_022364.1 multifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities: forms a heterotetramer with FadI; similar to FadA2B2 complex; involved in the anaerobic degradation of long and medium-chain fatty acids in the presence of nitrate; Derived by automated computational analysis using gene prediction method: Protein Homology.; fatty-acid oxidation protein subunit alpha 2550670 fadJ 16980094 fadJ Escherichia coli LY180 fatty-acid oxidation protein subunit alpha YP_008565512.1 2548526 R 1335916 CDS YP_008565513.1 544390939 16980095 complement(2550670..2551980) 1 NC_022364.1 FadI; fatty acid oxidation complex component beta; functions in a heterotetramer with FadJ; similar to FadA2B2 complex; functions in beta-oxidation of fatty acids during anaerobic growth; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-ketoacyl-CoA thiolase 2551980 fadI 16980095 fadI Escherichia coli LY180 3-ketoacyl-CoA thiolase YP_008565513.1 2550670 R 1335916 CDS YP_008565514.1 544390940 16980096 complement(2552160..2552444) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2552444 16980096 LY180_12130 Escherichia coli LY180 hypothetical protein YP_008565514.1 2552160 R 1335916 CDS YP_008565515.1 544390941 16980097 2552816..2554156 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; long-chain fatty acid outer membrane transporter 2554156 16980097 LY180_12135 Escherichia coli LY180 long-chain fatty acid outer membrane transporter YP_008565515.1 2552816 D 1335916 CDS YP_008565516.1 544390942 16980098 2554521..2555579 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2555579 16980098 LY180_12140 Escherichia coli LY180 hypothetical protein YP_008565516.1 2554521 D 1335916 CDS YP_008565517.1 544390943 16980099 complement(2555761..2556516) 1 NC_022364.1 involved in maintaining OM lipid asymmetry; Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2556516 16980099 LY180_12145 Escherichia coli LY180 membrane protein YP_008565517.1 2555761 R 1335916 CDS YP_008565518.1 544390944 16980100 2556810..2557742 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2557742 16980100 LY180_12150 Escherichia coli LY180 membrane protein YP_008565518.1 2556810 D 1335916 CDS YP_008565519.1 544390945 16980102 complement(2558334..2559581) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; MFS transporter 2559581 16980102 LY180_12160 Escherichia coli LY180 MFS transporter YP_008565519.1 2558334 R 1335916 CDS YP_008565520.1 544390946 16980103 complement(2559653..2560567) 1 NC_022364.1 phosphorylates aminoimidazole ribotide (AIR) which forms 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate (HMP-P); synthesis of HMP-P from AIR is complex and requires the product of thiC gene at least; Derived by automated computational analysis using gene prediction method: Protein Homology.; aminoimidazole riboside kinase 2560567 16980103 LY180_12165 Escherichia coli LY180 aminoimidazole riboside kinase YP_008565520.1 2559653 R 1335916 CDS YP_008565521.1 544390947 16980104 2560783..2562216 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glycosyl hydrolase family 32 2562216 16980104 LY180_12170 Escherichia coli LY180 glycosyl hydrolase family 32 YP_008565521.1 2560783 D 1335916 CDS YP_008565522.1 544390948 16980105 complement(2562224..2563282) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sucrose operon repressor 2563282 16980105 LY180_12175 Escherichia coli LY180 sucrose operon repressor YP_008565522.1 2562224 R 1335916 CDS YP_008565523.1 544390949 16980106 2563450..2563668 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2563668 16980106 LY180_12180 Escherichia coli LY180 hypothetical protein YP_008565523.1 2563450 D 1335916 CDS YP_008565524.1 544390950 16980107 2563686..2565014 1 NC_022364.1 catalyzes the formation of pyruvate from serine; Derived by automated computational analysis using gene prediction method: Protein Homology.; D-serine dehydratase 2565014 16980107 LY180_12185 Escherichia coli LY180 D-serine dehydratase YP_008565524.1 2563686 D 1335916 CDS YP_008565525.1 544393053 16980108 2565191..2566399 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2566399 16980108 LY180_12190 Escherichia coli LY180 hypothetical protein YP_008565525.1 2565191 D 1335916 CDS YP_008565526.1 544390951 16980109 complement(2566460..2567998) 1 NC_022364.1 multidrug MFS transporte; with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid; Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug resistance protein B 2567998 emrB 16980109 emrB Escherichia coli LY180 multidrug resistance protein B YP_008565526.1 2566460 R 1335916 CDS YP_008565527.1 544390952 16980110 complement(2567998..2569161) 1 NC_022364.1 with ErmA and TolC forms a multidrug efflux system; Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug transporter 2569161 16980110 LY180_12200 Escherichia coli LY180 multidrug transporter YP_008565527.1 2567998 R 1335916 CDS YP_008565528.1 544390953 16980111 2569577..2570191 1 NC_022364.1 response regulator in two-component regulatory system with EvgS; phosphorylated EvgA activates ompC, emrKY, gadABC, hdeAB and others genes; involved in acid resistance, osmotic adaption, and drug resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.; LuxR family transcriptional regulator 2570191 16980111 LY180_12205 Escherichia coli LY180 LuxR family transcriptional regulator YP_008565528.1 2569577 D 1335916 CDS YP_008565529.1 544390954 16980112 2570196..2573789 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sensory histidine kinase 2573789 16980112 LY180_12210 Escherichia coli LY180 sensory histidine kinase YP_008565529.1 2570196 D 1335916 CDS YP_008565530.1 544390955 16980113 complement(2573845..2574990) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; CoA-transferase 2574990 16980113 LY180_12215 Escherichia coli LY180 CoA-transferase YP_008565530.1 2573845 R 1335916 CDS YP_008565531.1 544390956 16980114 complement(2575064..2576008) 1 NC_022364.1 member of the AEC family of auxin efflux transporters; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 2576008 16980114 LY180_12220 Escherichia coli LY180 transporter YP_008565531.1 2575064 R 1335916 CDS YP_008565532.1 544390957 16980115 complement(2576078..2576998) 1 NC_022364.1 catalyzes the formation of formyl-CoA from oxalyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.; oxalyl-CoA decarboxylase 2576998 16980115 LY180_12225 Escherichia coli LY180 oxalyl-CoA decarboxylase YP_008565532.1 2576078 R 1335916 CDS YP_008565533.1 544393054 16980116 complement(2576973..2577911) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2577911 16980116 LY180_12230 Escherichia coli LY180 hypothetical protein YP_008565533.1 2576973 R 1335916 CDS YP_008565534.1 544393055 16980117 complement(2578121..2579110) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; oxalyl-CoA decarboxylase 2579110 16980117 LY180_12235 Escherichia coli LY180 oxalyl-CoA decarboxylase YP_008565534.1 2578121 R 1335916 CDS YP_008565535.1 544390958 16980118 complement(2579164..2580414) 1 NC_022364.1 catalyzes the formation of oxalyl-CoA from oxalate and Formyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.; formyl-CoA transferase 2580414 16980118 LY180_12240 Escherichia coli LY180 formyl-CoA transferase YP_008565535.1 2579164 R 1335916 CDS YP_008565536.1 544390959 16980119 complement(2580927..2581559) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2581559 16980119 LY180_12245 Escherichia coli LY180 hypothetical protein YP_008565536.1 2580927 R 1335916 CDS YP_008565537.1 544390960 16980120 2581855..2582130 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2582130 16980120 LY180_12250 Escherichia coli LY180 hypothetical protein YP_008565537.1 2581855 D 1335916 CDS YP_008565538.1 544390961 16980121 complement(2582207..2582449) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2582449 16980121 LY180_12255 Escherichia coli LY180 hypothetical protein YP_008565538.1 2582207 R 1335916 CDS YP_008565539.1 544390962 16980122 2582802..2583722 1 NC_022364.1 Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(palmitoleoyl)-lipid IVA in cells subjected to cold shock; Derived by automated computational analysis using gene prediction method: Protein Homology.; lipid A biosynthesis palmitoleoyl acyltransferase 2583722 16980122 LY180_12260 Escherichia coli LY180 lipid A biosynthesis palmitoleoyl acyltransferase YP_008565539.1 2582802 D 1335916 CDS YP_008565540.1 544390963 16980123 complement(2584214..2585452) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; aspartate aminotransferase 2585452 16980123 LY180_12265 Escherichia coli LY180 aspartate aminotransferase YP_008565540.1 2584214 R 1335916 CDS YP_008565541.1 544393056 16980124 complement(2585616..2585777) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2585777 16980124 LY180_12270 Escherichia coli LY180 hypothetical protein YP_008565541.1 2585616 R 1335916 CDS YP_008565542.1 544390964 16980125 2585829..2587526 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2587526 16980125 LY180_12275 Escherichia coli LY180 membrane protein YP_008565542.1 2585829 D 1335916 CDS YP_008565543.1 544390965 16980126 2587541..2588275 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LytTR family transcriptional regulator 2588275 16980126 LY180_12280 Escherichia coli LY180 LytTR family transcriptional regulator YP_008565543.1 2587541 D 1335916 CDS YP_008565544.1 544390966 16980127 2588288..2589145 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; AraC family transcriptional regulator 2589145 16980127 LY180_12285 Escherichia coli LY180 AraC family transcriptional regulator YP_008565544.1 2588288 D 1335916 CDS YP_008565545.1 544390967 16980128 complement(2589148..2591643) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS fructose transporter subunit IIA 2591643 16980128 LY180_12290 Escherichia coli LY180 PTS fructose transporter subunit IIA YP_008565545.1 2589148 R 1335916 CDS YP_008565546.1 544390968 16980129 complement(2591668..2592705) 1 NC_022364.1 metalloprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.; exoaminopeptidase 2592705 16980129 LY180_12295 Escherichia coli LY180 exoaminopeptidase YP_008565546.1 2591668 R 1335916 CDS YP_008565547.1 544390969 16980130 complement(2592705..2593790) 1 NC_022364.1 Xaa-Pro aminopeptidase; limited methionine aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.; aminopeptidase 2593790 16980130 LY180_12300 Escherichia coli LY180 aminopeptidase YP_008565547.1 2592705 R 1335916 CDS YP_008565548.1 544390970 16980131 complement(2593805..2595052) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS fructose transporter subunit IIC 2595052 16980131 LY180_12305 Escherichia coli LY180 PTS fructose transporter subunit IIC YP_008565548.1 2593805 R 1335916 CDS YP_008565549.1 544390971 16980132 complement(2595074..2595400) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS fructose transporter subunit IIB 2595400 16980132 LY180_12310 Escherichia coli LY180 PTS fructose transporter subunit IIB YP_008565549.1 2595074 R 1335916 CDS YP_008565550.1 544390972 16980133 complement(2595619..2596584) 1 NC_022364.1 catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; glucokinase 2596584 glk 16980133 glk Escherichia coli LY180 glucokinase YP_008565550.1 2595619 R 1335916 CDS YP_008565551.1 544390973 16980134 2596788..2598044 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ion channel protein 2598044 16980134 LY180_12320 Escherichia coli LY180 ion channel protein YP_008565551.1 2596788 D 1335916 CDS YP_008565552.1 544390974 16980135 2598159..2598485 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2598485 16980135 LY180_12325 Escherichia coli LY180 hypothetical protein YP_008565552.1 2598159 D 1335916 CDS YP_008565553.1 544390975 16980136 complement(2598626..2599864) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; manganese transporter 2599864 16980136 LY180_12330 Escherichia coli LY180 manganese transporter YP_008565553.1 2598626 R 1335916 CDS YP_008565554.1 544390976 16980137 2600200..2601402 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; nucleoside permease 2601402 16980137 LY180_12335 Escherichia coli LY180 nucleoside permease YP_008565554.1 2600200 D 1335916 CDS YP_008565555.1 544390977 16980138 complement(2601452..2603641) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2603641 16980138 LY180_12340 Escherichia coli LY180 hypothetical protein YP_008565555.1 2601452 R 1335916 CDS YP_008565556.1 544390978 16980141 2604261..2604620 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2604620 16980141 LY180_12355 Escherichia coli LY180 hypothetical protein YP_008565556.1 2604261 D 1335916 CDS YP_008565557.1 544390979 16980142 2604622..2605014 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2605014 16980142 LY180_12360 Escherichia coli LY180 hypothetical protein YP_008565557.1 2604622 D 1335916 CDS YP_008565558.1 544390980 16980143 complement(2605066..2606481) 1 NC_022364.1 catalyzes a two-step reaction, first charging an glutamate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutaminyl-tRNA synthetase 2606481 gltX 16980143 gltX Escherichia coli LY180 glutaminyl-tRNA synthetase YP_008565558.1 2605066 R 1335916 CDS YP_008565559.1 544390981 16980148 2607413..2607754 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; protein flxA 2607754 16980148 LY180_12390 Escherichia coli LY180 protein flxA YP_008565559.1 2607413 D 1335916 CDS YP_008565560.1 544390982 16980149 complement(2607745..2608671) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LysR family transcripitonal regulator 2608671 16980149 LY180_12395 Escherichia coli LY180 LysR family transcripitonal regulator YP_008565560.1 2607745 R 1335916 CDS YP_008565561.1 544390983 16980150 2608761..2609759 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2609759 16980150 LY180_12400 Escherichia coli LY180 hypothetical protein YP_008565561.1 2608761 D 1335916 CDS YP_008565562.1 544390984 16980151 complement(2609756..2609974) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2609974 16980151 LY180_12405 Escherichia coli LY180 hypothetical protein YP_008565562.1 2609756 R 1335916 CDS YP_008565563.1 544390985 16980152 complement(2609976..2611991) 1 NC_022364.1 this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; Derived by automated computational analysis using gene prediction method: Protein Homology.; NAD-dependent DNA ligase LigA 2611991 ligA 16980152 ligA Escherichia coli LY180 NAD-dependent DNA ligase LigA YP_008565563.1 2609976 R 1335916 CDS YP_008565564.1 544390986 16980153 complement(2612062..2613048) 1 NC_022364.1 interacts with cell division protein FitsZ and may be required to anchor septal ring structure; Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division protein ZipA 2613048 16980153 LY180_12415 Escherichia coli LY180 cell division protein ZipA YP_008565564.1 2612062 R 1335916 CDS YP_008565565.1 544390987 16980154 2613278..2614039 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sulfate transporter 2614039 16980154 LY180_12420 Escherichia coli LY180 sulfate transporter YP_008565565.1 2613278 D 1335916 CDS YP_008565566.1 544390988 16980155 2614224..2615195 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cysteine synthase A 2615195 16980155 LY180_12425 Escherichia coli LY180 cysteine synthase A YP_008565566.1 2614224 D 1335916 CDS YP_008565567.1 544390989 16980156 2615579..2615836 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS sugar transporter 2615836 16980156 LY180_12430 Escherichia coli LY180 PTS sugar transporter YP_008565567.1 2615579 D 1335916 CDS YP_008565568.1 544390990 16980157 2615881..2617608 1 NC_022364.1 Phosphotransferase system, enzyme I; transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein; part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active-transport system; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoenolpyruvate-protein phosphotransferase 2617608 16980157 LY180_12435 Escherichia coli LY180 phosphoenolpyruvate-protein phosphotransferase YP_008565568.1 2615881 D 1335916 CDS YP_008565569.1 544390991 16980158 2617649..2618158 1 NC_022364.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS glucose transporter subunit IIA 2618158 16980158 LY180_12440 Escherichia coli LY180 PTS glucose transporter subunit IIA YP_008565569.1 2617649 D 1335916 CDS YP_008565570.1 544390992 16980159 complement(2618200..2619051) 1 NC_022364.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal; Derived by automated computational analysis using gene prediction method: Protein Homology.; hydroxymethylpyrimidine kinase 2619051 pdxK 16980159 pdxK Escherichia coli LY180 hydroxymethylpyrimidine kinase YP_008565570.1 2618200 R 1335916 CDS YP_008565571.1 544390993 16980160 2619156..2619524 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2619524 16980160 LY180_12450 Escherichia coli LY180 hypothetical protein YP_008565571.1 2619156 D 1335916 CDS YP_008565572.1 544390994 16980161 complement(2619527..2620438) 1 NC_022364.1 catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; Derived by automated computational analysis using gene prediction method: Protein Homology.; cysteine synthase B 2620438 cysM 16980161 cysM Escherichia coli LY180 cysteine synthase B YP_008565572.1 2619527 R 1335916 CDS YP_008565573.1 544390995 16980162 complement(2620572..2621669) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sulfate ABC transporter ATP-binding protein 2621669 16980162 LY180_12460 Escherichia coli LY180 sulfate ABC transporter ATP-binding protein YP_008565573.1 2620572 R 1335916 CDS YP_008565574.1 544390996 16980163 complement(2621659..2622534) 1 NC_022364.1 Part of the ABC transporter complex cysAWTP involved in sulfate/thiosulfate import; Derived by automated computational analysis using gene prediction method: Protein Homology.; sulfate/thiosulfate transporter permease subunit 2622534 cysW 16980163 cysW Escherichia coli LY180 sulfate/thiosulfate transporter permease subunit YP_008565574.1 2621659 R 1335916 CDS YP_008565575.1 544390997 16980164 complement(2622534..2623367) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sulfate/thiosulfate transporter subunit 2623367 16980164 LY180_12470 Escherichia coli LY180 sulfate/thiosulfate transporter subunit YP_008565575.1 2622534 R 1335916 CDS YP_008565576.1 544390998 16980165 complement(2623367..2624383) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; thiosulfate transporter subunit 2624383 16980165 LY180_12475 Escherichia coli LY180 thiosulfate transporter subunit YP_008565576.1 2623367 R 1335916 CDS YP_008565577.1 544390999 16980166 complement(2624554..2625345) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; short-chain dehydrogenase 2625345 16980166 LY180_12480 Escherichia coli LY180 short-chain dehydrogenase YP_008565577.1 2624554 R 1335916 CDS YP_008565578.1 544391000 16980167 complement(2625474..2626331) 1 NC_022364.1 repressor for murPQ; N-acetylmuramic acid 6-phosphate inducible; Derived by automated computational analysis using gene prediction method: Protein Homology.; RpiR family transcriptional regulator 2626331 16980167 LY180_12485 Escherichia coli LY180 RpiR family transcriptional regulator YP_008565578.1 2625474 R 1335916 CDS YP_008565579.1 544391001 16980168 2626495..2627391 1 NC_022364.1 catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.; N-acetylmuramic acid-6-phosphate etherase 2627391 murQ 16980168 murQ Escherichia coli LY180 N-acetylmuramic acid-6-phosphate etherase YP_008565579.1 2626495 D 1335916 CDS YP_008565580.1 544391002 16980169 2627395..2628819 1 NC_022364.1 belongs to PEP-dependent PTS system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; requires crr-encoded enzyme IIA-glucose component; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS N-acetylmuramic acid transporter subunit IIBC 2628819 murP 16980169 murP Escherichia coli LY180 PTS N-acetylmuramic acid transporter subunit IIBC YP_008565580.1 2627395 D 1335916 CDS YP_008565581.1 544391003 16980170 2628824..2630128 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; esterase 2630128 16980170 LY180_12500 Escherichia coli LY180 esterase YP_008565581.1 2628824 D 1335916 CDS YP_008565582.1 544391004 16980171 complement(2630186..2631085) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; deferrochelatase/peroxidase YfeX 2631085 16980171 LY180_12505 Escherichia coli LY180 deferrochelatase/peroxidase YfeX YP_008565582.1 2630186 R 1335916 CDS YP_008565583.1 544391005 16980172 complement(2631181..2631756) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; RpoE-regulated lipoprotein 2631756 16980172 LY180_12510 Escherichia coli LY180 RpoE-regulated lipoprotein YP_008565583.1 2631181 R 1335916 CDS YP_008565584.1 544391006 16980173 complement(2631817..2632266) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2632266 16980173 LY180_12515 Escherichia coli LY180 membrane protein YP_008565584.1 2631817 R 1335916 CDS YP_008565585.1 544391007 16980174 complement(2632253..2632678) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acetyltransferase 2632678 16980174 LY180_12520 Escherichia coli LY180 acetyltransferase YP_008565585.1 2632253 R 1335916 CDS YP_008565586.1 544391008 16980175 2632892..2633761 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; N-acetylmuramoyl-L-alanine amidase 2633761 16980175 LY180_12525 Escherichia coli LY180 N-acetylmuramoyl-L-alanine amidase YP_008565586.1 2632892 D 1335916 CDS YP_008565587.1 544391009 16980176 2633765..2634664 1 NC_022364.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; coproporphyrinogen III oxidase 2634664 16980176 LY180_12530 Escherichia coli LY180 coproporphyrinogen III oxidase YP_008565587.1 2633765 D 1335916 CDS YP_008565588.1 544391010 16980177 complement(2634670..2635722) 1 NC_022364.1 activates the transcription of the ethanolamine utilization operon; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2635722 16980177 LY180_12535 Escherichia coli LY180 transcriptional regulator YP_008565588.1 2634670 R 1335916 CDS YP_008565589.1 544391011 16980178 complement(2635768..2636268) 1 NC_022364.1 ethanolamine utilization protein; involved in the degredation of ethanolamine; Derived by automated computational analysis using gene prediction method: Protein Homology.; carboxysome shell protein 2636268 16980178 LY180_12540 Escherichia coli LY180 carboxysome shell protein YP_008565589.1 2635768 R 1335916 CDS YP_008565590.1 544391012 16980179 complement(2636281..2636940) 1 NC_022364.1 carboxysome structural protein involved in ethanolamine utilization; Derived by automated computational analysis using gene prediction method: Protein Homology.; ethanolamine utilization protein EutL 2636940 16980179 LY180_12545 Escherichia coli LY180 ethanolamine utilization protein EutL YP_008565590.1 2636281 R 1335916 CDS YP_008565591.1 544391013 16980180 complement(2636950..2637837) 1 NC_022364.1 catalyzes the formation of acetaldehyde from ethanolamine; Derived by automated computational analysis using gene prediction method: Protein Homology.; ethanolamine ammonia-lyase small subunit 2637837 16980180 LY180_12550 Escherichia coli LY180 ethanolamine ammonia-lyase small subunit YP_008565591.1 2636950 R 1335916 CDS YP_008565592.1 544391014 16980181 complement(2637858..2639219) 1 NC_022364.1 with EutC catalyzes the formation of acetaldehyde and ammonia from ethanolamine; Derived by automated computational analysis using gene prediction method: Protein Homology.; ethanolamine ammonia lyase large subunit 2639219 16980181 LY180_12555 Escherichia coli LY180 ethanolamine ammonia lyase large subunit YP_008565592.1 2637858 R 1335916 CDS YP_008565593.1 544391015 16980182 complement(2639231..2640634) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ethanolamine utilization protein EutA 2640634 eutA 16980182 eutA Escherichia coli LY180 ethanolamine utilization protein EutA YP_008565593.1 2639231 R 1335916 CDS YP_008565594.1 544391016 16980183 complement(2640631..2641857) 1 NC_022364.1 may be involved in the transport of ethanolamine; Derived by automated computational analysis using gene prediction method: Protein Homology.; ethanolamine utilization protein EutH 2641857 16980183 LY180_12565 Escherichia coli LY180 ethanolamine utilization protein EutH YP_008565594.1 2640631 R 1335916 CDS YP_008565595.1 544391017 16980184 complement(2641974..2643161) 1 NC_022364.1 aldehyde reductase; catalyzes the conversion of acetaldehyde to ethanol; Derived by automated computational analysis using gene prediction method: Protein Homology.; ethanol dehydrogenase 2643161 16980184 LY180_12570 Escherichia coli LY180 ethanol dehydrogenase YP_008565595.1 2641974 R 1335916 CDS YP_008565596.1 544391018 16980185 complement(2643151..2643987) 1 NC_022364.1 possible chaperonin; may be involved in the assembly of the carboxysome; Derived by automated computational analysis using gene prediction method: Protein Homology.; ethanolamine utilization protein EutJ 2643987 16980185 LY180_12575 Escherichia coli LY180 ethanolamine utilization protein EutJ YP_008565596.1 2643151 R 1335916 CDS YP_008565597.1 544391019 16980186 complement(2643998..2645401) 1 NC_022364.1 ethanolamine utilization protein; catalyzes the formation of acetyl-CoA from acetaldehyde; Derived by automated computational analysis using gene prediction method: Protein Homology.; aldehyde dehydrogenase 2645401 16980186 LY180_12580 Escherichia coli LY180 aldehyde dehydrogenase YP_008565597.1 2643998 R 1335916 CDS YP_008565598.1 544391020 16980187 complement(2645413..2645700) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ethanolamine catabolic microcompartment shell protein EutN 2645700 16980187 LY180_12585 Escherichia coli LY180 ethanolamine catabolic microcompartment shell protein EutN YP_008565598.1 2645413 R 1335916 CDS YP_008565599.1 544391021 16980188 complement(2645807..2646142) 1 NC_022364.1 ethanolamine utilization protein; involved in the degredation of ethanolamine; Derived by automated computational analysis using gene prediction method: Protein Homology.; carboxysome shell protein 2646142 16980188 LY180_12590 Escherichia coli LY180 carboxysome shell protein YP_008565599.1 2645807 R 1335916 CDS YP_008565600.1 544391022 16980189 complement(2646139..2647155) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphotransacetylase 2647155 16980189 LY180_12595 Escherichia coli LY180 phosphotransacetylase YP_008565600.1 2646139 R 1335916 CDS YP_008565601.1 544391023 16980190 complement(2647152..2647955) 1 NC_022364.1 catalyzes the conversion of cob(I)yrinic acid a,c-diamide to adenosylcob(III)yrinic acid a,c-diamide; Derived by automated computational analysis using gene prediction method: Protein Homology.; ethanolamine utilization cobalamin adenosyltransferase 2647955 16980190 LY180_12600 Escherichia coli LY180 ethanolamine utilization cobalamin adenosyltransferase YP_008565601.1 2647152 R 1335916 CDS YP_008565602.1 544391024 16980191 complement(2647952..2648653) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ethanolamine utilization protein EutQ 2648653 16980191 LY180_12605 Escherichia coli LY180 ethanolamine utilization protein EutQ YP_008565602.1 2647952 R 1335916 CDS YP_008565603.1 544391025 16980192 complement(2648628..2649107) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ethanolamine utilization protein EutP 2649107 16980192 LY180_12610 Escherichia coli LY180 ethanolamine utilization protein EutP YP_008565603.1 2648628 R 1335916 CDS YP_008565604.1 544391026 16980193 complement(2649120..2649455) 1 NC_022364.1 ethanolamine utilization protein; involved in the degredation of ethanolamine; Derived by automated computational analysis using gene prediction method: Protein Homology.; carboxysome shell protein 2649455 16980193 LY180_12615 Escherichia coli LY180 carboxysome shell protein YP_008565604.1 2649120 R 1335916 CDS YP_008565605.1 544391027 16980194 complement(2649748..2652027) 1 NC_022364.1 NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; Derived by automated computational analysis using gene prediction method: Protein Homology.; malic enzyme 2652027 16980194 LY180_12620 Escherichia coli LY180 malic enzyme YP_008565605.1 2649748 R 1335916 CDS YP_008565606.1 544391028 16980195 2652316..2653266 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transaldolase 2653266 16980195 LY180_12625 Escherichia coli LY180 transaldolase YP_008565606.1 2652316 D 1335916 CDS YP_008565607.1 544391029 16980196 2653286..2655289 1 NC_022364.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology.; transketolase 2655289 16980196 LY180_12630 Escherichia coli LY180 transketolase YP_008565607.1 2653286 D 1335916 CDS YP_008565608.1 544391030 16980198 complement(2656554..2657129) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; GDP-mannose pyrophosphatase NudK 2657129 16980198 LY180_12640 Escherichia coli LY180 GDP-mannose pyrophosphatase NudK YP_008565608.1 2656554 R 1335916 CDS YP_008565609.1 544391031 16980199 complement(2657197..2659176) 1 NC_022364.1 unknown function; in E. coli the aegA gene is regulated by Fnr, NarXL, and NarQ (but not ArcA), induced under anaerobic conditions and repressed in the presence of nitrate (anaerobic); Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase Fe-S binding subunit 2659176 16980199 LY180_12645 Escherichia coli LY180 oxidoreductase Fe-S binding subunit YP_008565609.1 2657197 R 1335916 CDS YP_008565610.1 544391032 16980200 2659382..2661082 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrate/nitrite sensor protein NarQ 2661082 16980200 LY180_12650 Escherichia coli LY180 nitrate/nitrite sensor protein NarQ YP_008565610.1 2659382 D 1335916 CDS YP_008565611.1 544391033 16980201 2661246..2664359 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug transporter 2664359 16980201 LY180_12655 Escherichia coli LY180 multidrug transporter YP_008565611.1 2661246 D 1335916 CDS YP_008565612.1 544391034 16980202 2664898..2665254 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; reductase 2665254 16980202 LY180_12660 Escherichia coli LY180 reductase YP_008565612.1 2664898 D 1335916 CDS YP_008565613.1 544391035 16980203 2665258..2666385 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; succinyl-diaminopimelate desuccinylase 2666385 16980203 LY180_12665 Escherichia coli LY180 succinyl-diaminopimelate desuccinylase YP_008565613.1 2665258 D 1335916 CDS YP_008565614.1 544391036 16980204 2666413..2666613 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2666613 16980204 LY180_12670 Escherichia coli LY180 membrane protein YP_008565614.1 2666413 D 1335916 CDS YP_008565615.1 544391037 16980205 complement(2666694..2667392) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrolase 2667392 16980205 LY180_12675 Escherichia coli LY180 hydrolase YP_008565615.1 2666694 R 1335916 CDS YP_008565616.1 544391038 16980206 complement(2667466..2669481) 1 NC_022364.1 cetylates the wobble base C34 of the elongation-specific methionine tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; methionine tRNA cytidine acetyltransferase 2669481 16980206 LY180_12680 Escherichia coli LY180 methionine tRNA cytidine acetyltransferase YP_008565616.1 2667466 R 1335916 CDS YP_008565617.1 544391039 16980207 complement(2669496..2670359) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2670359 16980207 LY180_12685 Escherichia coli LY180 hypothetical protein YP_008565617.1 2669496 R 1335916 CDS YP_008565618.1 544393057 16980208 complement(2670506..2670904) 1 NC_022364.1 stability determinant protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; pirin 2670904 16980208 LY180_12690 Escherichia coli LY180 pirin YP_008565618.1 2670506 R 1335916 CDS YP_008565619.1 544393058 16980209 complement(2670904..2671170) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; antitoxin 2671170 16980209 LY180_12695 Escherichia coli LY180 antitoxin YP_008565619.1 2670904 R 1335916 CDS YP_008565620.1 544391040 16980210 complement(2671286..2671999) 1 NC_022364.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoribosylaminoimidazole-succinocarboxamide synthase 2671999 16980210 LY180_12700 Escherichia coli LY180 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_008565620.1 2671286 R 1335916 CDS YP_008565621.1 544391041 16980211 complement(2672212..2673246) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; lipoprotein 2673246 16980211 LY180_12705 Escherichia coli LY180 lipoprotein YP_008565621.1 2672212 R 1335916 CDS YP_008565622.1 544391042 16980212 complement(2673263..2674141) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; dihydrodipicolinate synthase 2674141 16980212 LY180_12710 Escherichia coli LY180 dihydrodipicolinate synthase YP_008565622.1 2673263 R 1335916 CDS YP_008565623.1 544391043 16980213 2674287..2674859 1 NC_022364.1 negative transcriptional regulator of the gcvTHP operon; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycine cleavage system regulatory protein 2674859 gcvR 16980213 gcvR Escherichia coli LY180 glycine cleavage system regulatory protein YP_008565623.1 2674287 D 1335916 CDS YP_008565624.1 544391044 16980214 2674859..2675329 1 NC_022364.1 bacterioferritin comigratory protein; thiol peroxidase; thioredoxin-dependent; hydroperoxide peroxidase; in Escherichia coli this enzyme preferentially reduces linoleic acid hydroperoxide; contains an active site cysteine; Derived by automated computational analysis using gene prediction method: Protein Homology.; thioredoxin-dependent thiol peroxidase 2675329 bcp 16980214 bcp Escherichia coli LY180 thioredoxin-dependent thiol peroxidase YP_008565624.1 2674859 D 1335916 CDS YP_008565625.1 544391045 16980215 2675582..2676199 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; formate hydrogenlyase subunit 2 2676199 16980215 LY180_12725 Escherichia coli LY180 formate hydrogenlyase subunit 2 YP_008565625.1 2675582 D 1335916 CDS YP_008565626.1 544391046 16980216 2676199..2678217 1 NC_022364.1 catalyzes the oxidation of formate to carbon dioxide and molecular hydrogen; formate hydrogenlyase comprises of a formate dehydrogenase, unidentified electron carriers and a hydrogenase (subunit 3); Derived by automated computational analysis using gene prediction method: Protein Homology.; formate hydrogenlyase subunit 3 2678217 16980216 LY180_12730 Escherichia coli LY180 formate hydrogenlyase subunit 3 YP_008565626.1 2676199 D 1335916 CDS YP_008565627.1 544391047 16980217 2678228..2679175 1 NC_022364.1 formate hydrogenlyase subunit 4; HycBCDEFG is part of the formate hydrogenlyase system which is involved in the cleaving of formate to dihydrogen and carbon dioxide; Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrogenase 3 membrane subunit 2679175 hycD 16980217 hycD Escherichia coli LY180 hydrogenase 3 membrane subunit YP_008565627.1 2678228 D 1335916 CDS YP_008565628.1 544391048 16980218 2679192..2680631 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase 2680631 16980218 LY180_12740 Escherichia coli LY180 oxidoreductase YP_008565628.1 2679192 D 1335916 CDS YP_008565629.1 544391049 16980219 2680643..2681293 1 NC_022364.1 interacts with formate dehydrogenase to produce an active formate hydrogenlyase complex which cleaves formate to dihydrogen and carbon dioxide; Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrogenase-4 subunit E 2681293 hyfE 16980219 hyfE Escherichia coli LY180 hydrogenase-4 subunit E YP_008565629.1 2680643 D 1335916 CDS YP_008565630.1 544391050 16980220 2681298..2682878 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrogenase 2682878 16980220 LY180_12750 Escherichia coli LY180 hydrogenase YP_008565630.1 2681298 D 1335916 CDS YP_008565631.1 544391051 16980221 2682868..2684583 1 NC_022364.1 formate hydrogenlyase subunit 5; HycBCDEFG is part of the formate hydrogenlyase system which is involved in the cleaving of formate to dihydrogen and carbon dioxide; Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrogenase 3 large subunit 2684583 hycE 16980221 hycE Escherichia coli LY180 hydrogenase 3 large subunit YP_008565631.1 2682868 D 1335916 CDS YP_008565632.1 544391052 16980222 2684593..2685132 1 NC_022364.1 probable electron transfer protein for hydrogenase 4; hydrogenase 4 is believed to be silent in E. coli under conditions tested so far; Derived by automated computational analysis using gene prediction method: Protein Homology.; (4Fe-4S)-binding protein 2685132 16980222 LY180_12760 Escherichia coli LY180 (4Fe-4S)-binding protein YP_008565632.1 2684593 D 1335916 CDS YP_008565633.1 544391053 16982291 2685879..2686292 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; formate hydrogenlyase maturation protein HycH 2686292 16982291 LY180_12765 Escherichia coli LY180 formate hydrogenlyase maturation protein HycH YP_008565633.1 2685879 D 1335916 CDS YP_008565634.1 544391054 16980224 2686322..2688334 1 NC_022364.1 regulates the expression of formate dehydrogenase H and hydrogenase-3 structural genes; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2688334 16980224 LY180_12770 Escherichia coli LY180 transcriptional regulator YP_008565634.1 2686322 D 1335916 CDS YP_008565635.1 544391055 16980225 2688356..2689204 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; formate transporter 2689204 16980225 LY180_12775 Escherichia coli LY180 formate transporter YP_008565635.1 2688356 D 1335916 CDS YP_008565636.1 544391056 16980226 complement(2689242..2690303) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; permase 2690303 16980226 LY180_12780 Escherichia coli LY180 permase YP_008565636.1 2689242 R 1335916 CDS YP_008565637.1 544391057 16980227 2690516..2691979 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2691979 16980227 LY180_12785 Escherichia coli LY180 hypothetical protein YP_008565637.1 2690516 D 1335916 CDS YP_008565638.1 544391058 16980228 2692000..2692359 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; arsenate reductase 2692359 16980228 LY180_12790 Escherichia coli LY180 arsenate reductase YP_008565638.1 2692000 D 1335916 CDS YP_008565639.1 544391059 16980229 complement(2692497..2693243) 1 NC_022364.1 controls initiation of DNA replication by inhibiting re-initiation of replication, promotes hydrolysis of DnaA-bound ATP; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA replication initiation factor 2693243 16980229 LY180_12795 Escherichia coli LY180 DNA replication initiation factor YP_008565639.1 2692497 R 1335916 CDS YP_008565640.1 544391060 16980230 complement(2693293..2694582) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; uracil transporter 2694582 16980230 LY180_12800 Escherichia coli LY180 uracil transporter YP_008565640.1 2693293 R 1335916 CDS YP_008565641.1 544391061 16980231 complement(2694668..2695294) 1 NC_022364.1 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; uracil phosphoribosyltransferase 2695294 upp 16980231 upp Escherichia coli LY180 uracil phosphoribosyltransferase YP_008565641.1 2694668 R 1335916 CDS YP_008565642.1 544391062 16980232 2695619..2696656 1 NC_022364.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoribosylaminoimidazole synthetase 2696656 16980232 LY180_12810 Escherichia coli LY180 phosphoribosylaminoimidazole synthetase YP_008565642.1 2695619 D 1335916 CDS YP_008565643.1 544391063 16980233 2696656..2697294 1 NC_022364.1 glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoribosylglycinamide formyltransferase 2697294 purN 16980233 purN Escherichia coli LY180 phosphoribosylglycinamide formyltransferase YP_008565643.1 2696656 D 1335916 CDS YP_008565644.1 544391064 16980234 2697465..2699531 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; polyphosphate kinase 2699531 16980234 LY180_12820 Escherichia coli LY180 polyphosphate kinase YP_008565644.1 2697465 D 1335916 CDS YP_008565645.1 544391065 16980235 2699536..2701077 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; exopolyphosphatase 2701077 16980235 LY180_12825 Escherichia coli LY180 exopolyphosphatase YP_008565645.1 2699536 D 1335916 CDS YP_008565646.1 544391066 16980236 complement(2701116..2703359) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cyclic di-GMP phosphodiesterase 2703359 16980236 LY180_12830 Escherichia coli LY180 cyclic di-GMP phosphodiesterase YP_008565646.1 2701116 R 1335916 CDS YP_008565647.1 544391067 16980237 complement(2703541..2703693) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2703693 16980237 LY180_12835 Escherichia coli LY180 hypothetical protein YP_008565647.1 2703541 R 1335916 CDS YP_008565648.1 544391068 16980238 2703711..2703902 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2703902 16980238 LY180_12840 Escherichia coli LY180 membrane protein YP_008565648.1 2703711 D 1335916 CDS YP_008565649.1 544391069 16980239 2704213..2704731 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2704731 16980239 LY180_12845 Escherichia coli LY180 membrane protein YP_008565649.1 2704213 D 1335916 CDS YP_008565650.1 544391070 16980240 2704747..2705286 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2705286 16980240 LY180_12850 Escherichia coli LY180 hypothetical protein YP_008565650.1 2704747 D 1335916 CDS YP_008565651.1 544391071 16980241 complement(2705381..2706958) 1 NC_022364.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.; GMP synthase 2706958 guaA 16980241 guaA Escherichia coli LY180 GMP synthase YP_008565651.1 2705381 R 1335916 CDS YP_008565652.1 544391072 16980242 complement(2707027..2708538) 1 NC_022364.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; inosine 5'-monophosphate dehydrogenase 2708538 16980242 LY180_12860 Escherichia coli LY180 inosine 5'-monophosphate dehydrogenase YP_008565652.1 2707027 R 1335916 CDS YP_008565653.1 544391073 16980243 2708655..2710025 1 NC_022364.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; Derived by automated computational analysis using gene prediction method: Protein Homology.; exodeoxyribonuclease VII large subunit 2710025 xseA 16980243 xseA Escherichia coli LY180 exodeoxyribonuclease VII large subunit YP_008565653.1 2708655 D 1335916 CDS YP_008565654.1 544391074 16980244 complement(2710022..2710237) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2710237 16980244 LY180_12870 Escherichia coli LY180 hypothetical protein YP_008565654.1 2710022 R 1335916 CDS YP_008565655.1 544391075 16980245 complement(2710306..2711805) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; GTP-binding protein Der 2711805 16980245 LY180_12875 Escherichia coli LY180 GTP-binding protein Der YP_008565655.1 2710306 R 1335916 CDS YP_008565656.1 544391076 16980246 complement(2711896..2713074) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; outer membrane biogenesis protein BamB 2713074 16980246 LY180_12880 Escherichia coli LY180 outer membrane biogenesis protein BamB YP_008565656.1 2711896 R 1335916 CDS YP_008565657.1 544391077 16980247 complement(2713085..2713705) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2713705 16980247 LY180_12885 Escherichia coli LY180 membrane protein YP_008565657.1 2713085 R 1335916 CDS YP_008565658.1 544391078 16980248 complement(2713723..2714997) 1 NC_022364.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; Derived by automated computational analysis using gene prediction method: Protein Homology.; histidyl-tRNA synthetase 2714997 hisS 16980248 hisS Escherichia coli LY180 histidyl-tRNA synthetase YP_008565658.1 2713723 R 1335916 CDS YP_008565659.1 544391079 16980249 complement(2715108..2716226) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 2716226 16980249 LY180_12895 Escherichia coli LY180 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_008565659.1 2715108 R 1335916 CDS YP_008565660.1 544391080 16980250 complement(2716253..2717266) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cytoskeletal protein RodZ 2717266 16980250 LY180_12900 Escherichia coli LY180 cytoskeletal protein RodZ YP_008565660.1 2716253 R 1335916 CDS YP_008565661.1 544391081 16980251 complement(2717551..2718705) 1 NC_022364.1 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S rRNA methyltransferase 2718705 16980251 LY180_12905 Escherichia coli LY180 50S rRNA methyltransferase YP_008565661.1 2717551 R 1335916 CDS YP_008565662.1 544391082 16980252 complement(2718855..2719286) 1 NC_022364.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; nucleoside diphosphate kinase 2719286 16980252 LY180_12910 Escherichia coli LY180 nucleoside diphosphate kinase YP_008565662.1 2718855 R 1335916 CDS YP_008565663.1 544391083 16980253 complement(2719435..2721747) 1 NC_022364.1 penicillin-insensitive transglycosylase/transpeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.; penicillin-binding protein 1C 2721747 16980253 LY180_12915 Escherichia coli LY180 penicillin-binding protein 1C YP_008565663.1 2719435 R 1335916 CDS YP_008565664.1 544391084 16980254 complement(2721748..2726709) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2726709 16980254 LY180_12920 Escherichia coli LY180 hypothetical protein YP_008565664.1 2721748 R 1335916 CDS YP_008565665.1 544391085 16980255 2726916..2727761 1 NC_022364.1 catalyzes the transfer of a sulfur ion to cyanide or to other thiol compounds; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-mercaptopyruvate sulfurtransferase 2727761 sseA 16980255 sseA Escherichia coli LY180 3-mercaptopyruvate sulfurtransferase YP_008565665.1 2726916 D 1335916 CDS YP_008565666.1 544391086 16980256 complement(2728254..2729030) 1 NC_022364.1 enhances serine sensitivity caused by inhibition of homoserine dehydrogenase I; Derived by automated computational analysis using gene prediction method: Protein Homology.; enhanced serine sensitivity protein SseB 2729030 16980256 LY180_12930 Escherichia coli LY180 enhanced serine sensitivity protein SseB YP_008565666.1 2728254 R 1335916 CDS YP_008565667.1 544391087 16980257 complement(2729172..2730455) 1 NC_022364.1 catalyzes the removal of an N-terminal amino acid from a peptide or arylamide; Derived by automated computational analysis using gene prediction method: Protein Homology.; aminopeptidase B 2730455 16980257 LY180_12935 Escherichia coli LY180 aminopeptidase B YP_008565667.1 2729172 R 1335916 CDS YP_008565668.1 544391088 16980258 complement(2730633..2730833) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2730833 16980258 LY180_12940 Escherichia coli LY180 hypothetical protein YP_008565668.1 2730633 R 1335916 CDS YP_008565669.1 544391089 16980259 complement(2730845..2731180) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 2Fe-2S ferredoxin 2731180 16980259 LY180_12945 Escherichia coli LY180 2Fe-2S ferredoxin YP_008565669.1 2730845 R 1335916 CDS YP_008565670.1 544391090 16980260 complement(2731182..2733032) 1 NC_022364.1 involved in the maturation of iron-sulfur cluster-containing proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; chaperone protein HscA 2733032 hscA 16980260 hscA Escherichia coli LY180 chaperone protein HscA YP_008565670.1 2731182 R 1335916 CDS YP_008565671.1 544391091 16980261 complement(2733049..2733564) 1 NC_022364.1 J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; co-chaperone HscB 2733564 hscB 16980261 hscB Escherichia coli LY180 co-chaperone HscB YP_008565671.1 2733049 R 1335916 CDS YP_008565672.1 544391092 16980262 complement(2733660..2733983) 1 NC_022364.1 forms iron-sulfur clusters of ferredoxin [2FE-2S]; binds iron in the presence of the thioredoxin reductase system; forms homodimers and tetramers; similar to SufA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; iron-sulfur cluster assembly protein 2733983 iscA 16980262 iscA Escherichia coli LY180 iron-sulfur cluster assembly protein YP_008565672.1 2733660 R 1335916 CDS YP_008565673.1 544391093 16980263 complement(2734000..2734386) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; FeS cluster assembly scaffold IscU 2734386 16980263 LY180_12965 Escherichia coli LY180 FeS cluster assembly scaffold IscU YP_008565673.1 2734000 R 1335916 CDS YP_008565674.1 544391094 16980264 complement(2734414..2735628) 1 NC_022364.1 catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; cysteine desulfurase 2735628 16980264 LY180_12970 Escherichia coli LY180 cysteine desulfurase YP_008565674.1 2734414 R 1335916 CDS YP_008565675.1 544391095 16980265 complement(2735740..2736228) 1 NC_022364.1 regulates the expression of the iscRSUA operon; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2736228 16980265 LY180_12975 Escherichia coli LY180 transcriptional regulator YP_008565675.1 2735740 R 1335916 CDS YP_008565676.1 544391096 16980266 complement(2736498..2737238) 1 NC_022364.1 catalyzes the fromation of 2'O-methylated cytidine or 2'O-methylated uridine at position 32 in tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA methyltransferase 2737238 16980266 LY180_12980 Escherichia coli LY180 tRNA methyltransferase YP_008565676.1 2736498 R 1335916 CDS YP_008565677.1 544391097 16980267 2737357..2738160 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; inositol monophosphatase 2738160 16980267 LY180_12985 Escherichia coli LY180 inositol monophosphatase YP_008565677.1 2737357 D 1335916 CDS YP_008565678.1 544391098 16980268 2738305..2739159 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2739159 16980268 LY180_12990 Escherichia coli LY180 hypothetical protein YP_008565678.1 2738305 D 1335916 CDS YP_008565679.1 544391099 16980269 2739350..2740630 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; stationary phase inducible protein CsiE 2740630 16980269 LY180_12995 Escherichia coli LY180 stationary phase inducible protein CsiE YP_008565679.1 2739350 D 1335916 CDS YP_008565680.1 544391100 16980270 complement(2740622..2741761) 1 NC_022364.1 transporter of 3-phenylpropionate across the inner membrane; member of the major facilitator superfamily of transporters; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-phenylpropionic acid MFS transporter 2741761 16980270 LY180_13000 Escherichia coli LY180 3-phenylpropionic acid MFS transporter YP_008565680.1 2740622 R 1335916 CDS YP_008565681.1 544391101 16980271 complement(2741921..2742811) 1 NC_022364.1 activator of 3-phenylpropionic acid catabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.; LysR family transcriptional regulator 2742811 16980271 LY180_13005 Escherichia coli LY180 LysR family transcriptional regulator YP_008565681.1 2741921 R 1335916 CDS YP_008565682.1 544393059 16980272 2742947..2743060 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2743060 16980272 LY180_13010 Escherichia coli LY180 hypothetical protein YP_008565682.1 2742947 D 1335916 CDS YP_008565683.1 544393060 16980273 complement(2743070..2744278) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2744278 16980273 LY180_13015 Escherichia coli LY180 hypothetical protein YP_008565683.1 2743070 R 1335916 CDS YP_008565684.1 544391102 16980274 2744351..2745646 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-phenylpropionate dioxygenase 2745646 16980274 LY180_13020 Escherichia coli LY180 3-phenylpropionate dioxygenase YP_008565684.1 2744351 D 1335916 CDS YP_008565685.1 544391103 16980275 2745643..2746161 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-phenylpropionate dioxygenase 2746161 16980275 LY180_13025 Escherichia coli LY180 3-phenylpropionate dioxygenase YP_008565685.1 2745643 D 1335916 CDS YP_008565686.1 544391104 16980276 2746161..2746481 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-phenylpropionate dioxygenase 2746481 16980276 LY180_13030 Escherichia coli LY180 3-phenylpropionate dioxygenase YP_008565686.1 2746161 D 1335916 CDS YP_008565687.1 544391105 16980277 2746478..2747290 1 NC_022364.1 Converts cis-3-(3-carboxyethyl)-3,5-cyclohexadiene-1,2-diol (PP-dihydrodiol) into 3-(2,3-dihydroxylphenyl)propionate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase 2747290 16980277 LY180_13035 Escherichia coli LY180 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase YP_008565687.1 2746478 D 1335916 CDS YP_008565688.1 544391106 16980278 2747300..2748502 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phenylpropionate dioxygenase ferredoxin reductase subunit 2748502 16980278 LY180_13040 Escherichia coli LY180 phenylpropionate dioxygenase ferredoxin reductase subunit YP_008565688.1 2747300 D 1335916 CDS YP_008565689.1 544391107 16980279 2748599..2749021 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2749021 16980279 LY180_13045 Escherichia coli LY180 membrane protein YP_008565689.1 2748599 D 1335916 CDS YP_008565690.1 544391108 16980280 complement(2749069..2749941) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2749941 16980280 LY180_13050 Escherichia coli LY180 hypothetical protein YP_008565690.1 2749069 R 1335916 CDS YP_008565691.1 544391109 16980281 complement(2749953..2751047) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; alcohol dehydrogenase 2751047 16980281 LY180_13055 Escherichia coli LY180 alcohol dehydrogenase YP_008565691.1 2749953 R 1335916 CDS YP_008565692.1 544391110 16980282 complement(2751080..2752078) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar ABC transporter permease 2752078 16980282 LY180_13060 Escherichia coli LY180 sugar ABC transporter permease YP_008565692.1 2751080 R 1335916 CDS YP_008565693.1 544391111 16980283 complement(2752103..2753614) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; heme ABC transporter ATP-binding protein 2753614 16980283 LY180_13065 Escherichia coli LY180 heme ABC transporter ATP-binding protein YP_008565693.1 2752103 R 1335916 CDS YP_008565694.1 544391112 16980284 complement(2753637..2754620) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar ABC transporter substrate-binding protein 2754620 16980284 LY180_13070 Escherichia coli LY180 sugar ABC transporter substrate-binding protein YP_008565694.1 2753637 R 1335916 CDS YP_008565695.1 544391113 16980285 complement(2754717..2757998) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2757998 16980285 LY180_13075 Escherichia coli LY180 hypothetical protein YP_008565695.1 2754717 R 1335916 CDS YP_008565696.1 544391114 16980286 2758116..2759309 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2759309 16980286 LY180_13080 Escherichia coli LY180 hypothetical protein YP_008565696.1 2758116 D 1335916 CDS YP_008565697.1 544391115 16980287 complement(2759373..2760626) 1 NC_022364.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; Derived by automated computational analysis using gene prediction method: Protein Homology.; serine hydroxymethyltransferase 2760626 glyA 16980287 glyA Escherichia coli LY180 serine hydroxymethyltransferase YP_008565697.1 2759373 R 1335916 CDS YP_008565698.1 544391116 16980288 2760954..2762144 1 NC_022364.1 flavohemoprotein; catalyzes the formation of nitrate from nitric oxide; can also catalyze the reduction of dihydropteridine; Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional nitric oxide dioxygenase/dihydropteridine reductase 2 2762144 16980288 LY180_13090 Escherichia coli LY180 bifunctional nitric oxide dioxygenase/dihydropteridine reductase 2 YP_008565698.1 2760954 D 1335916 CDS YP_008565699.1 544391117 16980289 complement(2762189..2762527) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrogen regulatory protein P-II 2762527 16980289 LY180_13095 Escherichia coli LY180 nitrogen regulatory protein P-II YP_008565699.1 2762189 R 1335916 CDS YP_008565700.1 544391118 16980290 complement(2762588..2763922) 1 NC_022364.1 with GlrK is part of a two-component signal transduction system regulating glmY; Derived by automated computational analysis using gene prediction method: Protein Homology.; response regulator 2763922 16980290 LY180_13100 Escherichia coli LY180 response regulator YP_008565700.1 2762588 R 1335916 CDS YP_008565701.1 544391119 16980291 complement(2763912..2764625) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2764625 16980291 LY180_13105 Escherichia coli LY180 membrane protein YP_008565701.1 2763912 R 1335916 CDS YP_008565702.1 544391120 16980292 complement(2764790..2766217) 1 NC_022364.1 part of the GlrKR two-component signal transduction system involved in the regulation of glmY; Derived by automated computational analysis using gene prediction method: Protein Homology.; sensory histidine kinase 2766217 16980292 LY180_13110 Escherichia coli LY180 sensory histidine kinase YP_008565702.1 2764790 R 1335916 CDS YP_008565703.1 544391121 16980293 complement(2766793..2770680) 1 NC_022364.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoribosylformylglycinamidine synthase 2770680 16980293 LY180_13115 Escherichia coli LY180 phosphoribosylformylglycinamidine synthase YP_008565703.1 2766793 R 1335916 CDS YP_008565704.1 544391122 16980294 2770938..2772494 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2772494 16980294 LY180_13120 Escherichia coli LY180 membrane protein YP_008565704.1 2770938 D 1335916 CDS YP_008565705.1 544391123 16980295 complement(2772491..2773027) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; adenosine deaminase 2773027 16980295 LY180_13125 Escherichia coli LY180 adenosine deaminase YP_008565705.1 2772491 R 1335916 CDS YP_008565706.1 544391124 16980296 complement(2773052..2773687) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2773687 16980296 LY180_13130 Escherichia coli LY180 hypothetical protein YP_008565706.1 2773052 R 1335916 CDS YP_008565707.1 544391125 16980297 2773896..2774744 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2774744 16980297 LY180_13135 Escherichia coli LY180 transcriptional regulator YP_008565707.1 2773896 D 1335916 CDS YP_008565708.1 544391126 16980298 2774800..2775060 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ferredoxin 2775060 16980298 LY180_13140 Escherichia coli LY180 ferredoxin YP_008565708.1 2774800 D 1335916 CDS YP_008565709.1 544393061 16980299 complement(2775254..2775334) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; small toxic protein shoB 2775334 16980299 LY180_13145 Escherichia coli LY180 small toxic protein shoB YP_008565709.1 2775254 R 1335916 CDS YP_008565710.1 544391127 16980300 complement(2775755..2776135) 1 NC_022364.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; Derived by automated computational analysis using gene prediction method: Protein Homology.; 4'-phosphopantetheinyl transferase 2776135 acpS 16980300 acpS Escherichia coli LY180 4'-phosphopantetheinyl transferase YP_008565710.1 2775755 R 1335916 CDS YP_008565711.1 544391128 16980301 complement(2776135..2776866) 1 NC_022364.1 involved in the de novo synthesis of pyridoxine (Vitamin B6); Derived by automated computational analysis using gene prediction method: Protein Homology.; pyridoxine 5'-phosphate synthase 2776866 16980301 LY180_13155 Escherichia coli LY180 pyridoxine 5'-phosphate synthase YP_008565711.1 2776135 R 1335916 CDS YP_008565712.1 544391129 16980302 complement(2776878..2777606) 1 NC_022364.1 involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA repair protein RecO 2777606 recO 16980302 recO Escherichia coli LY180 DNA repair protein RecO YP_008565712.1 2776878 R 1335916 CDS YP_008565713.1 544391130 16980303 complement(2777618..2778523) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; GTPase Era 2778523 16980303 LY180_13165 Escherichia coli LY180 GTPase Era YP_008565713.1 2777618 R 1335916 CDS YP_008565714.1 544391131 16980304 complement(2778520..2779200) 1 NC_022364.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonuclease III 2779200 rnc 16980304 rnc Escherichia coli LY180 ribonuclease III YP_008565714.1 2778520 R 1335916 CDS YP_008565715.1 544391132 16980305 complement(2779472..2780446) 1 NC_022364.1 catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; signal peptidase 2780446 16980305 LY180_13175 Escherichia coli LY180 signal peptidase YP_008565715.1 2779472 R 1335916 CDS YP_008565716.1 544391133 16980306 complement(2780462..2782261) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; elongation factor 4 2782261 16980306 LY180_13180 Escherichia coli LY180 elongation factor 4 YP_008565716.1 2780462 R 1335916 CDS YP_008565717.1 544391134 16980307 complement(2782459..2782938) 1 NC_022364.1 involved in the reduction of the SoxR iron-sulfur cluster; Derived by automated computational analysis using gene prediction method: Protein Homology.; SoxR reducing system protein RseC 2782938 16980307 LY180_13185 Escherichia coli LY180 SoxR reducing system protein RseC YP_008565717.1 2782459 R 1335916 CDS YP_008565718.1 544391135 16980308 complement(2782935..2783891) 1 NC_022364.1 periplasmic protein; interacts with the C-terminal domain of RseA and stimulates RseA binding to sigmaE via the cytoplasmic RseA N-terminal domain which then sequesters sigmaE in the membrane thereby preventing sigmaE associated with core RNAP; Derived by automated computational analysis using gene prediction method: Protein Homology.; anti-sigma E factor 2783891 rseB 16980308 rseB Escherichia coli LY180 anti-sigma E factor YP_008565718.1 2782935 R 1335916 CDS YP_008565719.1 544391136 16980309 complement(2783891..2784541) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; anti-RNA polymerase sigma factor SigE 2784541 16980309 LY180_13195 Escherichia coli LY180 anti-RNA polymerase sigma factor SigE YP_008565719.1 2783891 R 1335916 CDS YP_008565720.1 544391137 16980310 complement(2784574..2785149) 1 NC_022364.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; Derived by automated computational analysis using gene prediction method: Protein Homology.; RNA polymerase sigma factor AlgU 2785149 16980310 LY180_13200 Escherichia coli LY180 RNA polymerase sigma factor AlgU YP_008565720.1 2784574 R 1335916 CDS YP_008565721.1 544391138 16980311 2785557..2787179 1 NC_022364.1 catalyzes the formation of oxaloacetate from L-aspartate; Derived by automated computational analysis using gene prediction method: Protein Homology.; L-aspartate oxidase 2787179 16980311 LY180_13205 Escherichia coli LY180 L-aspartate oxidase YP_008565721.1 2785557 D 1335916 CDS YP_008565722.1 544391139 16980312 complement(2787164..2787901) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA (adenine-N6)-methyltransferase 2787901 16980312 LY180_13210 Escherichia coli LY180 tRNA (adenine-N6)-methyltransferase YP_008565722.1 2787164 R 1335916 CDS YP_008565723.1 544391140 16980313 2788033..2789367 1 NC_022364.1 facilitates an early step in the assembly of the 50S subunit of the ribosome; Derived by automated computational analysis using gene prediction method: Protein Homology.; RNA helicase 2789367 16980313 LY180_13215 Escherichia coli LY180 RNA helicase YP_008565723.1 2788033 D 1335916 CDS YP_008565724.1 544391141 16980314 complement(2789400..2790326) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LysR family transcriptional regulator 2790326 16980314 LY180_13220 Escherichia coli LY180 LysR family transcriptional regulator YP_008565724.1 2789400 R 1335916 CDS YP_008565725.1 544391142 16980315 2790384..2790971 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cysteine/O-acetylserine exporter 2790971 16980315 LY180_13225 Escherichia coli LY180 cysteine/O-acetylserine exporter YP_008565725.1 2790384 D 1335916 CDS YP_008565726.1 544391143 16980316 complement(2791026..2791409) 1 NC_022364.1 stress-induced glycyl radical protein that can replace an oxidatively damaged pyruvate formate-lyase subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.; autonomous glycyl radical cofactor GrcA 2791409 16980316 LY180_13230 Escherichia coli LY180 autonomous glycyl radical cofactor GrcA YP_008565726.1 2791026 R 1335916 CDS YP_008565727.1 544391144 16980317 2791714..2792403 1 NC_022364.1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; Derived by automated computational analysis using gene prediction method: Protein Homology.; uracil-DNA glycosylase 2792403 16980317 LY180_13235 Escherichia coli LY180 uracil-DNA glycosylase YP_008565727.1 2791714 D 1335916 CDS YP_008565728.1 544391145 16980318 complement(2792451..2793488) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; methyltransferase 2793488 16980318 LY180_13240 Escherichia coli LY180 methyltransferase YP_008565728.1 2792451 R 1335916 CDS YP_008565729.1 544391146 16980319 2793695..2794114 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; thioredoxin 2794114 16980319 LY180_13245 Escherichia coli LY180 thioredoxin YP_008565729.1 2793695 D 1335916 CDS YP_008565730.1 544391147 16980320 2794159..2794881 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2794881 16980320 LY180_13250 Escherichia coli LY180 hypothetical protein YP_008565730.1 2794159 D 1335916 CDS YP_008565731.1 544391148 16980321 2794913..2797573 1 NC_022364.1 catalyzes the acetylation of lysine; Derived by automated computational analysis using gene prediction method: Protein Homology.; protein lysine acetyltransferase 2797573 16980321 LY180_13255 Escherichia coli LY180 protein lysine acetyltransferase YP_008565731.1 2794913 D 1335916 CDS YP_008565732.1 544391149 16980322 2797687..2799042 1 NC_022364.1 catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine; bounds to the ribosome; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphatidylserine synthase 2799042 pssA 16980322 pssA Escherichia coli LY180 phosphatidylserine synthase YP_008565732.1 2797687 D 1335916 CDS YP_008565733.1 544391150 16980323 2799088..2799411 1 NC_022364.1 required for high salt suppression of motility; Derived by automated computational analysis using gene prediction method: Protein Homology.; lipoprotein 2799411 16980323 LY180_13265 Escherichia coli LY180 lipoprotein YP_008565733.1 2799088 D 1335916 CDS YP_008565734.1 544391151 16980324 complement(2799408..2800706) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; alpha-ketoglutarate transporter 2800706 16980324 LY180_13270 Escherichia coli LY180 alpha-ketoglutarate transporter YP_008565734.1 2799408 R 1335916 CDS YP_008565735.1 544393062 16980325 2800838..2800948 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2800948 16980325 LY180_13275 Escherichia coli LY180 hypothetical protein YP_008565735.1 2800838 D 1335916 CDS YP_008565736.1 544391152 16980330 complement(2806571..2809144) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; protein disaggregation chaperone 2809144 16980330 LY180_13300 Escherichia coli LY180 protein disaggregation chaperone YP_008565736.1 2806571 R 1335916 CDS YP_008565737.1 544391153 16980331 complement(2809274..2810005) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2810005 16980331 LY180_13305 Escherichia coli LY180 membrane protein YP_008565737.1 2809274 R 1335916 CDS YP_008565738.1 544391154 16980332 complement(2810002..2810982) 1 NC_022364.1 responsible for synthesis of pseudouridine from uracil at positions 1911, 1915 and 1917 in 23S ribosomal RNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; 23S rRNA pseudouridine synthase D 2810982 rluD 16980332 rluD Escherichia coli LY180 23S rRNA pseudouridine synthase D YP_008565738.1 2810002 R 1335916 CDS YP_008565739.1 544391155 16980333 2811117..2811854 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; outer membrane biogenesis protein BamD 2811854 16980333 LY180_13315 Escherichia coli LY180 outer membrane biogenesis protein BamD YP_008565739.1 2811117 D 1335916 CDS YP_008565740.1 544391156 16980334 2812125..2812466 1 NC_022364.1 associated with 30S ribosomal subunit; interferes with translation elongation; Derived by automated computational analysis using gene prediction method: Protein Homology.; translation inhibitor protein RaiA 2812466 16980334 LY180_13320 Escherichia coli LY180 translation inhibitor protein RaiA YP_008565740.1 2812125 D 1335916 CDS YP_008565741.1 544391157 16980335 2812716..2813876 1 NC_022364.1 catalyzing the formation of prephenate from chorismate and the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional chorismate mutase/prephenate dehydratase 2813876 pheA 16980335 pheA Escherichia coli LY180 bifunctional chorismate mutase/prephenate dehydratase YP_008565741.1 2812716 D 1335916 CDS YP_008565742.1 544391158 16980336 complement(2813919..2815040) 1 NC_022364.1 catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; chorismate mutase 2815040 tyrA 16980336 tyrA Escherichia coli LY180 chorismate mutase YP_008565742.1 2813919 R 1335916 CDS YP_008565743.1 544391159 16980337 complement(2815051..2816121) 1 NC_022364.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive; Derived by automated computational analysis using gene prediction method: Protein Homology.; phospho-2-dehydro-3-deoxyheptonate aldolase 2816121 16980337 LY180_13335 Escherichia coli LY180 phospho-2-dehydro-3-deoxyheptonate aldolase YP_008565743.1 2815051 R 1335916 CDS YP_008565744.1 544391160 16980338 2816331..2816696 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; lipoprotein 2816696 16980338 LY180_13340 Escherichia coli LY180 lipoprotein YP_008565744.1 2816331 D 1335916 CDS YP_008565745.1 544391161 16980339 2816846..2817364 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2817364 16980339 LY180_13345 Escherichia coli LY180 hypothetical protein YP_008565745.1 2816846 D 1335916 CDS YP_008565746.1 544391162 16980340 2817354..2818580 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; diguanylate cyclase 2818580 16980340 LY180_13350 Escherichia coli LY180 diguanylate cyclase YP_008565746.1 2817354 D 1335916 CDS YP_008565747.1 544391163 16980341 2818596..2819078 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2819078 16980341 LY180_13355 Escherichia coli LY180 membrane protein YP_008565747.1 2818596 D 1335916 CDS YP_008565748.1 544391164 16980342 complement(2819155..2819502) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L19 2819502 16980342 LY180_13360 Escherichia coli LY180 50S ribosomal protein L19 YP_008565748.1 2819155 R 1335916 CDS YP_008565749.1 544391165 16980343 complement(2819544..2820311) 1 NC_022364.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA (guanine-N1)-methyltransferase 2820311 trmD 16980343 trmD Escherichia coli LY180 tRNA (guanine-N1)-methyltransferase YP_008565749.1 2819544 R 1335916 CDS YP_008565750.1 544391166 16980344 complement(2820342..2820890) 1 NC_022364.1 Essential for efficient processing of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; 16S rRNA-processing protein M 2820890 rimM 16980344 rimM Escherichia coli LY180 16S rRNA-processing protein M YP_008565750.1 2820342 R 1335916 CDS YP_008565751.1 544391167 16980345 complement(2820909..2821157) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S16 2821157 16980345 LY180_13375 Escherichia coli LY180 30S ribosomal protein S16 YP_008565751.1 2820909 R 1335916 CDS YP_008565752.1 544391168 16980346 complement(2821406..2822767) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; signal recognition particle protein Srp54 2822767 16980346 LY180_13380 Escherichia coli LY180 signal recognition particle protein Srp54 YP_008565752.1 2821406 R 1335916 CDS YP_008565753.1 544391169 16980347 2822859..2823725 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2823725 16980347 LY180_13385 Escherichia coli LY180 membrane protein YP_008565753.1 2822859 D 1335916 CDS YP_008565754.1 544391170 16980348 2823770..2825032 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2825032 16980348 LY180_13390 Escherichia coli LY180 membrane protein YP_008565754.1 2823770 D 1335916 CDS YP_008565755.1 544391171 16980349 complement(2825087..2825680) 1 NC_022364.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; Derived by automated computational analysis using gene prediction method: Protein Homology.; heat shock protein GrpE 2825680 16980349 LY180_13395 Escherichia coli LY180 heat shock protein GrpE YP_008565755.1 2825087 R 1335916 CDS YP_008565756.1 544391172 16980350 2825803..2826681 1 NC_022364.1 catalyzes the phosphorylation of NAD to NADP; Derived by automated computational analysis using gene prediction method: Protein Homology.; inorganic polyphosphate/ATP-NAD kinase 2826681 ppnK 16980350 ppnK Escherichia coli LY180 inorganic polyphosphate/ATP-NAD kinase YP_008565756.1 2825803 D 1335916 CDS YP_008565757.1 544391173 16980351 2826767..2828428 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; recombinase 2828428 16980351 LY180_13405 Escherichia coli LY180 recombinase YP_008565757.1 2826767 D 1335916 CDS YP_008565758.1 544391174 16980352 2828577..2828918 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; outer membrane biogenesis protein BamE 2828918 16980352 LY180_13410 Escherichia coli LY180 outer membrane biogenesis protein BamE YP_008565758.1 2828577 D 1335916 CDS YP_008565759.1 544391175 16980353 complement(2828980..2829270) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2829270 16980353 LY180_13415 Escherichia coli LY180 hypothetical protein YP_008565759.1 2828980 R 1335916 CDS YP_008565760.1 544391176 16980354 complement(2829260..2829736) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2829736 16980354 LY180_13420 Escherichia coli LY180 hypothetical protein YP_008565760.1 2829260 R 1335916 CDS YP_008565761.1 544391177 16980355 2829868..2830350 1 NC_022364.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.; single-stranded DNA-binding protein 2830350 smpB 16980355 smpB Escherichia coli LY180 single-stranded DNA-binding protein YP_008565761.1 2829868 D 1335916 CDS YP_008565762.1 544393063 16980356 complement(2830347..2830451) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2830451 16980356 LY180_13430 Escherichia coli LY180 hypothetical protein YP_008565762.1 2830347 R 1335916 CDS YP_008565763.1 544393064 16980357 2831051..2832322 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; integrase 2832322 16980357 LY180_13435 Escherichia coli LY180 integrase YP_008565763.1 2831051 D 1335916 CDS YP_008565764.1 544393065 16980358 2832361..2832777 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2832777 16980358 LY180_13440 Escherichia coli LY180 hypothetical protein YP_008565764.1 2832361 D 1335916 CDS YP_008565765.1 544393066 16980359 complement(2832849..2834597) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2834597 16980359 LY180_13445 Escherichia coli LY180 hypothetical protein YP_008565765.1 2832849 R 1335916 CDS YP_008565766.1 544393067 16980360 complement(2834599..2836317) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2836317 16980360 LY180_13450 Escherichia coli LY180 hypothetical protein YP_008565766.1 2834599 R 1335916 CDS YP_008565767.1 544391178 16980361 complement(2836469..2837335) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transposase 2837335 16980361 LY180_13455 Escherichia coli LY180 transposase YP_008565767.1 2836469 R 1335916 CDS YP_008565768.1 544393068 16980362 complement(2837332..2837631) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase IS3 2837631 16980362 LY180_13460 Escherichia coli LY180 transposase IS3 YP_008565768.1 2837332 R 1335916 CDS YP_008565769.1 544393069 16980363 2837761..2838804 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2838804 16980363 LY180_13465 Escherichia coli LY180 hypothetical protein YP_008565769.1 2837761 D 1335916 CDS YP_008565770.1 544391179 16980364 2839140..2840117 1 NC_022364.1 in Escherichia coli this gene is induced by carbon starvation and depends on sigma S and cAMP-CRP; the structure of the Gab protein shows it is a member of non-heme iron (II)-dependent oxygenase superfamily which includes clavamini acid synthases; forms homotetramers in solution; Derived by automated computational analysis using gene prediction method: Protein Homology.; carbon starvation induced protein 2840117 16980364 LY180_13470 Escherichia coli LY180 carbon starvation induced protein YP_008565770.1 2839140 D 1335916 CDS YP_008565771.1 544391180 16980365 2840137..2841405 1 NC_022364.1 catalyzed the formation of 2-ketoglutarate from 2-hydroxyglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.; hydroxyglutarate oxidase 2841405 16980365 LY180_13475 Escherichia coli LY180 hydroxyglutarate oxidase YP_008565771.1 2840137 D 1335916 CDS YP_008565772.1 544391181 16980366 2841428..2842876 1 NC_022364.1 catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method: Protein Homology.; succinate-semialdehyde dehdyrogenase 2842876 gabD 16980366 gabD Escherichia coli LY180 succinate-semialdehyde dehdyrogenase YP_008565772.1 2841428 D 1335916 CDS YP_008565773.1 544391182 16980367 2842890..2844170 1 NC_022364.1 catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 4-aminobutyrate aminotransferase 2844170 16980367 LY180_13485 Escherichia coli LY180 4-aminobutyrate aminotransferase YP_008565773.1 2842890 D 1335916 CDS YP_008565774.1 544391183 16980368 2844407..2845807 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; gamma-aminobutyrate transporter 2845807 16980368 LY180_13490 Escherichia coli LY180 gamma-aminobutyrate transporter YP_008565774.1 2844407 D 1335916 CDS YP_008565775.1 544391184 16980369 2845828..2846490 1 NC_022364.1 regulator of gab gene expression; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2846490 16980369 LY180_13495 Escherichia coli LY180 transcriptional regulator YP_008565775.1 2845828 D 1335916 CDS YP_008565776.1 544391185 16980370 complement(2846491..2846940) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidoglycan-binding protein LysM 2846940 16980370 LY180_13500 Escherichia coli LY180 peptidoglycan-binding protein LysM YP_008565776.1 2846491 R 1335916 CDS YP_008565777.1 544391186 16980371 complement(2847024..2847182) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2847182 16980371 LY180_13505 Escherichia coli LY180 hypothetical protein YP_008565777.1 2847024 R 1335916 CDS YP_008565778.1 544391187 16980372 2847365..2847664 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2847664 16980372 LY180_13510 Escherichia coli LY180 transcriptional regulator YP_008565778.1 2847365 D 1335916 CDS YP_008565779.1 544391188 16980373 2847674..2848198 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2848198 16980373 LY180_13515 Escherichia coli LY180 membrane protein YP_008565779.1 2847674 D 1335916 CDS YP_008565780.1 544391189 16980374 complement(2848245..2848649) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA-binding protein 2848649 16980374 LY180_13520 Escherichia coli LY180 DNA-binding protein YP_008565780.1 2848245 R 1335916 CDS YP_008565781.1 544391190 16980375 2849317..2849766 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2849766 16980375 LY180_13525 Escherichia coli LY180 membrane protein YP_008565781.1 2849317 D 1335916 CDS YP_008565782.1 544391191 16980376 complement(2849803..2850147) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2850147 16980376 LY180_13530 Escherichia coli LY180 hypothetical protein YP_008565782.1 2849803 R 1335916 CDS YP_008565783.1 544391192 16980377 2850299..2850628 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2850628 16980377 LY180_13535 Escherichia coli LY180 membrane protein YP_008565783.1 2850299 D 1335916 CDS YP_008565784.1 544391193 16980378 2850876..2851121 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glutaredoxin 2851121 16980378 LY180_13540 Escherichia coli LY180 glutaredoxin YP_008565784.1 2850876 D 1335916 CDS YP_008565785.1 544391194 16980379 2851118..2851528 1 NC_022364.1 in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonucleotide reductase stimulatory protein 2851528 nrdI 16980379 nrdI Escherichia coli LY180 ribonucleotide reductase stimulatory protein YP_008565785.1 2851118 D 1335916 CDS YP_008565786.1 544391195 16980380 2851501..2853645 1 NC_022364.1 Catalyzes the rate-limiting step in dNTP synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonucleotide-diphosphate reductase subunit alpha 2853645 16980380 LY180_13550 Escherichia coli LY180 ribonucleotide-diphosphate reductase subunit alpha YP_008565786.1 2851501 D 1335916 CDS YP_008565787.1 544391196 16980381 2853655..2854614 1 NC_022364.1 B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonucleotide-diphosphate reductase subunit beta 2854614 16980381 LY180_13555 Escherichia coli LY180 ribonucleotide-diphosphate reductase subunit beta YP_008565787.1 2853655 D 1335916 CDS YP_008565788.1 544391197 16980382 2854969..2856171 1 NC_022364.1 with ProWX is involved in the high-affinity uptake of glycine betaine; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycine/betaine ABC transporter ATP-binding protein 2856171 16980382 LY180_13560 Escherichia coli LY180 glycine/betaine ABC transporter ATP-binding protein YP_008565788.1 2854969 D 1335916 CDS YP_008565789.1 544391198 16980383 2856164..2857228 1 NC_022364.1 with ProVX is involved in the high-affinity uptake of glycine betaine; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycine betaine transporter membrane protein 2857228 16980383 LY180_13565 Escherichia coli LY180 glycine betaine transporter membrane protein YP_008565789.1 2856164 D 1335916 CDS YP_008565790.1 544391199 16980384 2857286..2858278 1 NC_022364.1 with ProVW, part of the high-affinity transport system for the osmoprotectant glycine betaine; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycine/betaine ABC transporter substrate-binding protein 2858278 proX 16980384 proX Escherichia coli LY180 glycine/betaine ABC transporter substrate-binding protein YP_008565790.1 2857286 D 1335916 CDS YP_008565791.1 544391200 16980385 2858570..2859754 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 2859754 16980385 LY180_13575 Escherichia coli LY180 transporter YP_008565791.1 2858570 D 1335916 CDS YP_008565792.1 544391201 16980386 2859878..2860615 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2860615 16980386 LY180_13580 Escherichia coli LY180 membrane protein YP_008565792.1 2859878 D 1335916 CDS YP_008565793.1 544391202 16980387 2860605..2860940 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; branched-chain amino acid ABC transporter permease 2860940 16980387 LY180_13585 Escherichia coli LY180 branched-chain amino acid ABC transporter permease YP_008565793.1 2860605 D 1335916 CDS YP_008565794.1 544391203 16980388 2861031..2861561 1 NC_022364.1 DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux; negative regulator of the multidrug operon emrAB; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2861561 16980388 LY180_13590 Escherichia coli LY180 transcriptional regulator YP_008565794.1 2861031 D 1335916 CDS YP_008565795.1 544391204 16980389 2861688..2862860 1 NC_022364.1 with ErmA and TolC forms a multidrug efflux system; Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug transporter 2862860 16980389 LY180_13595 Escherichia coli LY180 multidrug transporter YP_008565795.1 2861688 D 1335916 CDS YP_008565796.1 544391205 16980390 2862877..2864415 1 NC_022364.1 multidrug MFS transporte; with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid; Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug resistance protein B 2864415 emrB 16980390 emrB Escherichia coli LY180 multidrug resistance protein B YP_008565796.1 2862877 D 1335916 CDS YP_008565797.1 544393070 16980391 2864673..2865380 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; 2'-5' RNA ligase 2865380 16980391 LY180_13605 Escherichia coli LY180 2'-5' RNA ligase YP_008565797.1 2864673 D 1335916 CDS YP_008565798.1 544393071 16980392 2865377..2866489 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2866489 16980392 LY180_13610 Escherichia coli LY180 hypothetical protein YP_008565798.1 2865377 D 1335916 CDS YP_008565799.1 544391206 16980393 complement(2866538..2867053) 1 NC_022364.1 catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; Derived by automated computational analysis using gene prediction method: Protein Homology.; S-ribosylhomocysteinase 2867053 16980393 LY180_13615 Escherichia coli LY180 S-ribosylhomocysteinase YP_008565799.1 2866538 R 1335916 CDS YP_008565800.1 544391207 16980394 complement(2867203..2868759) 1 NC_022364.1 involved in the first step of glutathione biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutamate--cysteine ligase 2868759 16980394 LY180_13620 Escherichia coli LY180 glutamate--cysteine ligase YP_008565800.1 2867203 R 1335916 CDS YP_008565801.1 544391208 16980395 complement(2868832..2869260) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2869260 16980395 LY180_13625 Escherichia coli LY180 membrane protein YP_008565801.1 2868832 R 1335916 CDS YP_008565802.1 544391209 16980396 complement(2869257..2869823) 1 NC_022364.1 YqaB; catalyzes the dephosphorylation of fructose 1-phosphate, 6-phosphogluconate and p-nitrophenyl phosphate (pNPP); presents beta-phosphoglucomutase activity at a lower extent; Derived by automated computational analysis using gene prediction method: Protein Homology.; fructose-1-P/6-phosphogluconate phosphatase 2869823 16980396 LY180_13630 Escherichia coli LY180 fructose-1-P/6-phosphogluconate phosphatase YP_008565802.1 2869257 R 1335916 CDS YP_008565803.1 544391210 16980402 complement(2871281..2871466) 1 NC_022364.1 affects carbohydrate metabolism; has regulatory role in many processes; Derived by automated computational analysis using gene prediction method: Protein Homology.; carbon storage regulator 2871466 16980402 LY180_13660 Escherichia coli LY180 carbon storage regulator YP_008565803.1 2871281 R 1335916 CDS YP_008565804.1 544391211 16980403 complement(2871701..2874331) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; alanyl-tRNA synthetase 2874331 16980403 LY180_13665 Escherichia coli LY180 alanyl-tRNA synthetase YP_008565804.1 2871701 R 1335916 CDS YP_008565805.1 544391212 16980404 complement(2874459..2874959) 1 NC_022364.1 binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; Derived by automated computational analysis using gene prediction method: Protein Homology.; recombination protein RecX 2874959 recX 16980404 recX Escherichia coli LY180 recombination protein RecX YP_008565805.1 2874459 R 1335916 CDS YP_008565806.1 544391213 16980405 complement(2875202..2876263) 1 NC_022364.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.; recombinase RecA 2876263 recA 16980405 recA Escherichia coli LY180 recombinase RecA YP_008565806.1 2875202 R 1335916 CDS YP_008565807.1 544391214 16980406 complement(2876343..2876840) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2876840 16980406 LY180_13680 Escherichia coli LY180 hypothetical protein YP_008565807.1 2876343 R 1335916 CDS YP_008565808.1 544391215 16980407 complement(2876985..2878070) 1 NC_022364.1 membrane-bound lytic murein transglycosylase B; catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan; Derived by automated computational analysis using gene prediction method: Protein Homology.; murein hydrolase B 2878070 16980407 LY180_13685 Escherichia coli LY180 murein hydrolase B YP_008565808.1 2876985 R 1335916 CDS YP_008565809.1 544391216 16980408 2878326..2878889 1 NC_022364.1 catalyzes the phosphorylation of incoming sugar substrates along with their translocation across the cell membrane; the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS sorbitol transporter subunit IIC 2878889 srlA 16980408 srlA Escherichia coli LY180 PTS sorbitol transporter subunit IIC YP_008565809.1 2878326 D 1335916 CDS YP_008565810.1 544391217 16980409 2878886..2879845 1 NC_022364.1 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; subunit IIB transfers the phosphoryl group to the substrate; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS sorbitol transporter subunit IIB 2879845 srlE 16980409 srlE Escherichia coli LY180 PTS sorbitol transporter subunit IIB YP_008565810.1 2878886 D 1335916 CDS YP_008565811.1 544391218 16980410 2879856..2880227 1 NC_022364.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS sorbitol transporter subunit IIA 2880227 16980410 LY180_13700 Escherichia coli LY180 PTS sorbitol transporter subunit IIA YP_008565811.1 2879856 D 1335916 CDS YP_008565812.1 544391219 16980411 2880231..2881010 1 NC_022364.1 catalyzes the conversion of sorbitol 6-phosphate into fructose 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; sorbitol-6-phosphate dehydrogenase 2881010 16980411 LY180_13705 Escherichia coli LY180 sorbitol-6-phosphate dehydrogenase YP_008565812.1 2880231 D 1335916 CDS YP_008565813.1 544391220 16980412 2881115..2881474 1 NC_022364.1 regulator for glucitol utilization; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2881474 16980412 LY180_13710 Escherichia coli LY180 transcriptional regulator YP_008565813.1 2881115 D 1335916 CDS YP_008565814.1 544391221 16980413 2881541..2882314 1 NC_022364.1 regulates genes involved in glucitol utilization; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2882314 srlR 16980413 srlR Escherichia coli LY180 transcriptional regulator YP_008565814.1 2881541 D 1335916 CDS YP_008565815.1 544391222 16980414 2882307..2883272 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; arabinose 5-phosphate isomerase 2883272 16980414 LY180_13720 Escherichia coli LY180 arabinose 5-phosphate isomerase YP_008565815.1 2882307 D 1335916 CDS YP_008565816.1 544391223 16980415 complement(2883269..2884783) 1 NC_022364.1 Required for the expression of anaerobic nitric oxide (NO) reductase; acts as a transcriptional activator for the norVW operon; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2884783 16980415 LY180_13725 Escherichia coli LY180 transcriptional regulator YP_008565816.1 2883269 R 1335916 CDS YP_008565817.1 544391224 16980416 2884970..2886409 1 NC_022364.1 detoxifies nitric oxide using NADH; Derived by automated computational analysis using gene prediction method: Protein Homology.; nitric oxide reductase 2886409 16980416 LY180_13730 Escherichia coli LY180 nitric oxide reductase YP_008565817.1 2884970 D 1335916 CDS YP_008565818.1 544391225 16980417 2886406..2887539 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; NADH:flavorubredoxin oxidoreductase 2887539 16980417 LY180_13735 Escherichia coli LY180 NADH:flavorubredoxin oxidoreductase YP_008565818.1 2886406 D 1335916 CDS YP_008565819.1 544391226 16980418 complement(2887765..2890017) 1 NC_022364.1 carbamoyltransferase; involved in the formation of the cyanate group of hydrogenase; catalyzes the formation of carbamoyladenylate from carbamoylphosphate and then transfers the carbamoyl group to HypE; Derived by automated computational analysis using gene prediction method: Protein Homology.; carbamoyl phosphate phosphatase 2890017 16980418 LY180_13740 Escherichia coli LY180 carbamoyl phosphate phosphatase YP_008565819.1 2887765 R 1335916 CDS YP_008565820.1 544391227 16980419 complement(2890170..2890550) 1 NC_022364.1 involved in electron transport from formate to hydrogen; Derived by automated computational analysis using gene prediction method: Protein Homology.; formate dehydrogenase-H ferredoxin subunit 2890550 16980419 LY180_13745 Escherichia coli LY180 formate dehydrogenase-H ferredoxin subunit YP_008565820.1 2890170 R 1335916 CDS YP_008565821.1 544393072 16980420 2890715..2891923 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2891923 16980420 LY180_13750 Escherichia coli LY180 hypothetical protein YP_008565821.1 2890715 D 1335916 CDS YP_008565822.1 544391228 16980421 complement(2892184..2893197) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2893197 16980421 LY180_13755 Escherichia coli LY180 transcriptional regulator YP_008565822.1 2892184 R 1335916 CDS YP_008565823.1 544391229 16980422 2893454..2894911 1 NC_022364.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS cellobiose transporter subunit IIBC 2894911 16980422 LY180_13760 Escherichia coli LY180 PTS cellobiose transporter subunit IIBC YP_008565823.1 2893454 D 1335916 CDS YP_008565824.1 544391230 16980423 2894920..2896344 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 6-phospho-beta-glucosidase 2896344 16980423 LY180_13765 Escherichia coli LY180 6-phospho-beta-glucosidase YP_008565824.1 2894920 D 1335916 CDS YP_008565825.1 544393073 16980424 complement(2896512..2897063) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase 2897063 16980424 LY180_13770 Escherichia coli LY180 transposase YP_008565825.1 2896512 R 1335916 CDS YP_008565826.1 544391231 16980425 complement(2897783..2898253) 1 NC_022364.1 involved in the C-terminal processing of the large subunit of hydrogenase 3 HycE; Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrogenase 3 maturation protease 2898253 hycI 16980425 hycI Escherichia coli LY180 hydrogenase 3 maturation protease YP_008565826.1 2897783 R 1335916 CDS YP_008565827.1 544391232 16980426 complement(2898246..2898656) 1 NC_022364.1 required for the maturation of the formate hydrogenlyase complex; Derived by automated computational analysis using gene prediction method: Protein Homology.; formate hydrogenlyase maturation protein HycH 2898656 16980426 LY180_13780 Escherichia coli LY180 formate hydrogenlyase maturation protein HycH YP_008565827.1 2898246 R 1335916 CDS YP_008565828.1 544391233 16980427 complement(2898653..2899420) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; formate hydrogenlyase subunit 7 2899420 16980427 LY180_13785 Escherichia coli LY180 formate hydrogenlyase subunit 7 YP_008565828.1 2898653 R 1335916 CDS YP_008565829.1 544391234 16980428 complement(2899420..2899962) 1 NC_022364.1 electron transfer protein for hydrogenase-3; the formate hydrogenlyase complex comprises of a formate dehydrogenase, unidentified electron carriers and hydrogenase-3; in this non-energy conserving pathway, molecular hydrogen and carbodioxide are released from formate; Derived by automated computational analysis using gene prediction method: Protein Homology.; formate hydrogenlyase complex iron-sulfur subunit 2899962 16980428 LY180_13790 Escherichia coli LY180 formate hydrogenlyase complex iron-sulfur subunit YP_008565829.1 2899420 R 1335916 CDS YP_008565830.1 544391235 16980429 complement(2899972..2901681) 1 NC_022364.1 formate hydrogenlyase subunit 5; HycBCDEFG is part of the formate hydrogenlyase system which is involved in the cleaving of formate to dihydrogen and carbon dioxide; Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrogenase 3 large subunit 2901681 hycE 16980429 hycE Escherichia coli LY180 hydrogenase 3 large subunit YP_008565830.1 2899972 R 1335916 CDS YP_008565831.1 544391236 16980430 complement(2901699..2902622) 1 NC_022364.1 formate hydrogenlyase subunit 4; HycBCDEFG is part of the formate hydrogenlyase system which is involved in the cleaving of formate to dihydrogen and carbon dioxide; Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrogenase 3 membrane subunit 2902622 hycD 16980430 hycD Escherichia coli LY180 hydrogenase 3 membrane subunit YP_008565831.1 2901699 R 1335916 CDS YP_008565832.1 544391237 16980431 complement(2902625..2904451) 1 NC_022364.1 catalyzes the oxidation of formate to carbon dioxide and molecular hydrogen; formate hydrogenlyase comprises of a formate dehydrogenase, unidentified electron carriers and a hydrogenase (subunit 3); Derived by automated computational analysis using gene prediction method: Protein Homology.; formate hydrogenlyase subunit 3 2904451 16980431 LY180_13805 Escherichia coli LY180 formate hydrogenlyase subunit 3 YP_008565832.1 2902625 R 1335916 CDS YP_008565833.1 544391238 16980432 complement(2904448..2905059) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; formate hydrogenlyase subunit 2 2905059 16980432 LY180_13810 Escherichia coli LY180 formate hydrogenlyase subunit 2 YP_008565833.1 2904448 R 1335916 CDS YP_008565834.1 544391239 16980433 complement(2905184..2905645) 1 NC_022364.1 regulates several genes involved in the formate hydrogenlyase system; seems to prevent binding of FhlA transcriptional activator to the activator sequence of hyc operon; Derived by automated computational analysis using gene prediction method: Protein Homology.; formate hydrogenlyase regulatory protein HycA 2905645 16980433 LY180_13815 Escherichia coli LY180 formate hydrogenlyase regulatory protein HycA YP_008565834.1 2905184 R 1335916 CDS YP_008565835.1 544393074 16980434 complement(2905679..2905816) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2905816 16980434 LY180_13820 Escherichia coli LY180 hypothetical protein YP_008565835.1 2905679 R 1335916 CDS YP_008565836.1 544391240 16980435 2905845..2906207 1 NC_022364.1 plays a role in hydrogenase nickel cofactor insertion; Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrogenase nickel incorporation protein 2906207 hypA 16980435 hypA Escherichia coli LY180 hydrogenase nickel incorporation protein YP_008565836.1 2905845 D 1335916 CDS YP_008565837.1 544391241 16980436 2906211..2907083 1 NC_022364.1 GTP hydrolase involved in nickel liganding into hydrogenases; Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrogenase nickel incorporation protein HypB 2907083 16980436 LY180_13830 Escherichia coli LY180 hydrogenase nickel incorporation protein HypB YP_008565837.1 2906211 D 1335916 CDS YP_008565838.1 544391242 16980437 2907074..2907346 1 NC_022364.1 HypC; accessory protein necessary for maturation of the hydrogenase isoforms 1, 2 and 3; forms a complex with HypD, HypE, and HypF proteins, which is the site of ligand biosynthesis and attachment to the iron atom of the NiFe site in the hydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrogenase assembly chaperone 2907346 16980437 LY180_13835 Escherichia coli LY180 hydrogenase assembly chaperone YP_008565838.1 2907074 D 1335916 CDS YP_008565839.1 544391243 16980438 2907346..2908467 1 NC_022364.1 necessary for the synthesis of all three hydrogenase isoenzymes; Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrogenase formation protein HypD 2908467 16980438 LY180_13840 Escherichia coli LY180 hydrogenase formation protein HypD YP_008565839.1 2907346 D 1335916 CDS YP_008565840.1 544391244 16980439 2908464..2909474 1 NC_022364.1 hydrogenase isoenzymes formation protein; involved in the formation of the cyanate group of the large subunit of the hydrogenase; catalyzes the formation of thiocyanate from thiocarbamate; Derived by automated computational analysis using gene prediction method: Protein Homology.; carbamoyl dehydratase 2909474 16980439 LY180_13845 Escherichia coli LY180 carbamoyl dehydratase YP_008565840.1 2908464 D 1335916 CDS YP_008565841.1 544391245 16980440 2909548..2911626 1 NC_022364.1 regulates the expression of formate dehydrogenase H and hydrogenase-3 structural genes; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2911626 16980440 LY180_13850 Escherichia coli LY180 transcriptional regulator YP_008565841.1 2909548 D 1335916 CDS YP_008565842.1 544391246 16980441 complement(2911663..2912016) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2912016 16980441 LY180_13855 Escherichia coli LY180 hypothetical protein YP_008565842.1 2911663 R 1335916 CDS YP_008565843.1 544391247 16980442 complement(2912048..2912227) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2912227 16980442 LY180_13860 Escherichia coli LY180 hypothetical protein YP_008565843.1 2912048 R 1335916 CDS YP_008565844.1 544391248 16980443 2912303..2914864 1 NC_022364.1 This protein performs the mismatch recognition step during the DNA repair process; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA mismatch repair protein MutS 2914864 16980443 LY180_13865 Escherichia coli LY180 DNA mismatch repair protein MutS YP_008565844.1 2912303 D 1335916 CDS YP_008565845.1 544391249 16980444 2914970..2915626 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; serine/threonine protein phosphatase 2915626 16980444 LY180_13870 Escherichia coli LY180 serine/threonine protein phosphatase YP_008565845.1 2914970 D 1335916 CDS YP_008565846.1 544391250 16980445 complement(2915677..2916444) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DeoR family transcriptional regulator 2916444 16980445 LY180_13875 Escherichia coli LY180 DeoR family transcriptional regulator YP_008565846.1 2915677 R 1335916 CDS YP_008565847.1 544391251 16980446 2916640..2917548 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase 2917548 16980446 LY180_13880 Escherichia coli LY180 oxidoreductase YP_008565847.1 2916640 D 1335916 CDS YP_008565848.1 544391252 16980447 2917545..2918807 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2918807 16980447 LY180_13885 Escherichia coli LY180 membrane protein YP_008565848.1 2917545 D 1335916 CDS YP_008565849.1 544393075 16980448 2918804..2919442 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; aldolase 2919442 16980448 LY180_13890 Escherichia coli LY180 aldolase YP_008565849.1 2918804 D 1335916 CDS YP_008565850.1 544391253 16980449 2919447..2920223 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hydroxypyruvate isomerase 2920223 16980449 LY180_13895 Escherichia coli LY180 hydroxypyruvate isomerase YP_008565850.1 2919447 D 1335916 CDS YP_008565851.1 544391254 16980450 2920312..2921676 1 NC_022364.1 member of the Gnt family of gluconate transporters; not involved in gluconate transport; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 2921676 16980450 LY180_13900 Escherichia coli LY180 transporter YP_008565851.1 2920312 D 1335916 CDS YP_008565852.1 544391255 16980451 complement(2921715..2921951) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 4-hydroxybenzoate decarboxylase 2921951 16980451 LY180_13905 Escherichia coli LY180 4-hydroxybenzoate decarboxylase YP_008565852.1 2921715 R 1335916 CDS YP_008565853.1 544391256 16980452 complement(2921962..2923389) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phenolic acid decarboxylase subunit C 2923389 16980452 LY180_13910 Escherichia coli LY180 phenolic acid decarboxylase subunit C YP_008565853.1 2921962 R 1335916 CDS YP_008565854.1 544391257 16980453 complement(2923389..2923982) 1 NC_022364.1 catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 2923982 16980453 LY180_13915 Escherichia coli LY180 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_008565854.1 2923389 R 1335916 CDS YP_008565855.1 544391258 16980454 2924129..2924536 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2924536 16980454 LY180_13920 Escherichia coli LY180 transcriptional regulator YP_008565855.1 2924129 D 1335916 CDS YP_008565856.1 544393076 16980455 complement(2924657..2925649) 1 NC_022364.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor controls a regulon of genes required for protection against external stresses; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; RNA polymerase sigma factor RpoS 2925649 16980455 LY180_13925 Escherichia coli LY180 RNA polymerase sigma factor RpoS YP_008565856.1 2924657 R 1335916 CDS YP_008565857.1 544391259 16980456 complement(2925712..2926851) 1 NC_022364.1 outer membrane lipoprotein involved in stationary-phase cell survival; similar to LppB virulence determinant from Haemophilus somnus; Derived by automated computational analysis using gene prediction method: Protein Homology.; lipoprotein NlpD 2926851 nlpD 16980456 nlpD Escherichia coli LY180 lipoprotein NlpD YP_008565857.1 2925712 R 1335916 CDS YP_008565858.1 544391260 16980457 complement(2926991..2927617) 1 NC_022364.1 catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; protein-L-isoaspartate O-methyltransferase 2927617 pcm 16980457 pcm Escherichia coli LY180 protein-L-isoaspartate O-methyltransferase YP_008565858.1 2926991 R 1335916 CDS YP_008565859.1 544391261 16980458 complement(2927611..2928372) 1 NC_022364.1 broad specificity 5'(3')-nucleotidase and polyphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.; stationary phase survival protein SurE 2928372 surE 16980458 surE Escherichia coli LY180 stationary phase survival protein SurE YP_008565859.1 2927611 R 1335916 CDS YP_008565860.1 544391262 16980459 complement(2928353..2929402) 1 NC_022364.1 catalyzes the modification of U13 in tRNA(Glu); Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA pseudouridine synthase D 2929402 truD 16980459 truD Escherichia coli LY180 tRNA pseudouridine synthase D YP_008565860.1 2928353 R 1335916 CDS YP_008565861.1 544391263 16980460 complement(2929399..2929878) 1 NC_022364.1 catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2929878 ispF 16980460 ispF Escherichia coli LY180 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_008565861.1 2929399 R 1335916 CDS YP_008565862.1 544391264 16980461 complement(2929878..2930588) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2930588 16980461 LY180_13955 Escherichia coli LY180 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_008565862.1 2929878 R 1335916 CDS YP_008565863.1 544391265 16980462 complement(2930607..2930918) 1 NC_022364.1 forms a complex with FtsL and FtsQ; colocalizes to the septal region of the dividing cell; membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division protein FtsB 2930918 ftsB 16980462 ftsB Escherichia coli LY180 cell division protein FtsB YP_008565863.1 2930607 R 1335916 CDS YP_008565864.1 544391266 16980463 complement(2931112..2931435) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2931435 16980463 LY180_13965 Escherichia coli LY180 membrane protein YP_008565864.1 2931112 R 1335916 CDS YP_008565865.1 544391267 16980464 complement(2931485..2932090) 1 NC_022364.1 converts ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; adenylylsulfate kinase 2932090 16980464 LY180_13970 Escherichia coli LY180 adenylylsulfate kinase YP_008565865.1 2931485 R 1335916 CDS YP_008565866.1 544391268 16980465 complement(2932090..2933517) 1 NC_022364.1 may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step; forms a heterodimer with CysD; part of the GTP-binding elongation factor family CysN/NodQ; Derived by automated computational analysis using gene prediction method: Protein Homology.; sulfate adenylyltransferase subunit 1 2933517 cysN 16980465 cysN Escherichia coli LY180 sulfate adenylyltransferase subunit 1 YP_008565866.1 2932090 R 1335916 CDS YP_008565867.1 544391269 16980466 complement(2933519..2934427) 1 NC_022364.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; Derived by automated computational analysis using gene prediction method: Protein Homology.; sulfate adenylyltransferase subunit 2 2934427 16980466 LY180_13980 Escherichia coli LY180 sulfate adenylyltransferase subunit 2 YP_008565867.1 2933519 R 1335916 CDS YP_008565868.1 544391270 16980467 2934679..2935716 1 NC_022364.1 catalyzes the sequential removal of 2 amino-terminal arginines from alkaline phosphatase isozyme 1 to form isozymes 2 and 3; Derived by automated computational analysis using gene prediction method: Protein Homology.; alkaline phosphatase isozyme conversion aminopeptidase 2935716 16980467 LY180_13985 Escherichia coli LY180 alkaline phosphatase isozyme conversion aminopeptidase YP_008565868.1 2934679 D 1335916 CDS YP_008565869.1 544391271 16980468 complement(2936777..2937070) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ssRNA endonuclease 2937070 16980468 LY180_13990 Escherichia coli LY180 ssRNA endonuclease YP_008565869.1 2936777 R 1335916 CDS YP_008565870.1 544391272 16980469 complement(2937070..2937990) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; CRISPR-associated protein Cas1 2937990 16980469 LY180_13995 Escherichia coli LY180 CRISPR-associated protein Cas1 YP_008565870.1 2937070 R 1335916 CDS YP_008565871.1 544391273 16980470 complement(2937987..2938637) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; CRISPR-associated protein Cas6 2938637 16980470 LY180_14000 Escherichia coli LY180 CRISPR-associated protein Cas6 YP_008565871.1 2937987 R 1335916 CDS YP_008565872.1 544391274 16980471 complement(2938619..2939365) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cytoplasmic protein 2939365 16980471 LY180_14005 Escherichia coli LY180 cytoplasmic protein YP_008565872.1 2938619 R 1335916 CDS YP_008565873.1 544391275 16980472 complement(2939376..2940431) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; CRISPR-associated protein Cse4 2940431 16980472 LY180_14010 Escherichia coli LY180 CRISPR-associated protein Cse4 YP_008565873.1 2939376 R 1335916 CDS YP_008565874.1 544391276 16980473 complement(2940443..2940982) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transposase 2940982 16980473 LY180_14015 Escherichia coli LY180 transposase YP_008565874.1 2940443 R 1335916 CDS YP_008565875.1 544391277 16980474 complement(2940979..2942541) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; CRISPR-associated protein CasA 2942541 16980474 LY180_14020 Escherichia coli LY180 CRISPR-associated protein CasA YP_008565875.1 2940979 R 1335916 CDS YP_008565876.1 544391278 16980475 complement(2942639..2945338) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; helicase 2945338 16980475 LY180_14025 Escherichia coli LY180 helicase YP_008565876.1 2942639 R 1335916 CDS YP_008565877.1 544391279 16980476 complement(2945533..2945685) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2945685 16980476 LY180_14030 Escherichia coli LY180 hypothetical protein YP_008565877.1 2945533 R 1335916 CDS YP_008565878.1 544391280 16980477 complement(2945950..2946684) 1 NC_022364.1 catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoadenosine phosphosulfate reductase 2946684 16980477 LY180_14035 Escherichia coli LY180 phosphoadenosine phosphosulfate reductase YP_008565878.1 2945950 R 1335916 CDS YP_008565879.1 544391281 16980478 complement(2946758..2948470) 1 NC_022364.1 hemoprotein; NADPH dependent; with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide; Derived by automated computational analysis using gene prediction method: Protein Homology.; sulfite reductase subunit beta 2948470 16980478 LY180_14040 Escherichia coli LY180 sulfite reductase subunit beta YP_008565879.1 2946758 R 1335916 CDS YP_008565880.1 544391282 16980479 complement(2948470..2950269) 1 NC_022364.1 catalyzes the reduction of sulfite to sulfide in the biosynthesis of L-cysteine from sulfate; a flavoprotein with flavin reductase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.; sulfite reductase subunit alpha 2950269 cysJ 16980479 cysJ Escherichia coli LY180 sulfite reductase subunit alpha YP_008565880.1 2948470 R 1335916 CDS YP_008565881.1 544391283 16980480 2950585..2950950 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 6-carboxy-5,6,7,8-tetrahydropterin synthase 2950950 16980480 LY180_14050 Escherichia coli LY180 6-carboxy-5,6,7,8-tetrahydropterin synthase YP_008565881.1 2950585 D 1335916 CDS YP_008565882.1 544391284 16980481 2951028..2952299 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; FAD-dependent oxidoreductase 2952299 16980481 LY180_14055 Escherichia coli LY180 FAD-dependent oxidoreductase YP_008565882.1 2951028 D 1335916 CDS YP_008565883.1 544391285 16980482 2952290..2952550 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ferredoxin 2952550 16980482 LY180_14060 Escherichia coli LY180 ferredoxin YP_008565883.1 2952290 D 1335916 CDS YP_008565884.1 544391286 16980483 2952567..2953142 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2953142 16980483 LY180_14065 Escherichia coli LY180 hypothetical protein YP_008565884.1 2952567 D 1335916 CDS YP_008565885.1 544391287 16980484 complement(2953290..2954150) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; electron transfer flavoprotein 2954150 16980484 LY180_14070 Escherichia coli LY180 electron transfer flavoprotein YP_008565885.1 2953290 R 1335916 CDS YP_008565886.1 544391288 16980485 complement(2954147..2954926) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; electron transfer flavoprotein subunit YgcR 2954926 16980485 LY180_14075 Escherichia coli LY180 electron transfer flavoprotein subunit YgcR YP_008565886.1 2954147 R 1335916 CDS YP_008565887.1 544391289 16980486 complement(2954904..2956241) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; major facilitator transporter 2956241 16980486 LY180_14080 Escherichia coli LY180 major facilitator transporter YP_008565887.1 2954904 R 1335916 CDS YP_008565888.1 544391290 16980487 complement(2956335..2957789) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; FAD-linked oxidoreductase 2957789 16980487 LY180_14085 Escherichia coli LY180 FAD-linked oxidoreductase YP_008565888.1 2956335 R 1335916 CDS YP_008565889.1 544391291 16980488 complement(2957859..2958644) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase 2958644 16980488 LY180_14090 Escherichia coli LY180 oxidoreductase YP_008565889.1 2957859 R 1335916 CDS YP_008565890.1 544391292 16980489 2958963..2960240 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2960240 16980489 LY180_14095 Escherichia coli LY180 membrane protein YP_008565890.1 2958963 D 1335916 CDS YP_008565891.1 544391293 16980490 2960267..2961745 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar kinase 2961745 16980490 LY180_14100 Escherichia coli LY180 sugar kinase YP_008565891.1 2960267 D 1335916 CDS YP_008565892.1 544391294 16980491 complement(2963363..2964034) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; coenzyme PQQ biosynthesis protein 2964034 16980491 LY180_14105 Escherichia coli LY180 coenzyme PQQ biosynthesis protein YP_008565892.1 2963363 R 1335916 CDS YP_008565893.1 544393077 16980492 2964173..2964313 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2964313 16980492 LY180_14110 Escherichia coli LY180 hypothetical protein YP_008565893.1 2964173 D 1335916 CDS YP_008565894.1 544393078 16980493 2964327..2965199 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2965199 16980493 LY180_14115 Escherichia coli LY180 hypothetical protein YP_008565894.1 2964327 D 1335916 CDS YP_008565895.1 544391295 16980494 complement(2965259..2966557) 1 NC_022364.1 catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; Derived by automated computational analysis using gene prediction method: Protein Homology.; enolase 2966557 eno 16980494 eno Escherichia coli LY180 enolase YP_008565895.1 2965259 R 1335916 CDS YP_008565896.1 544391296 16980495 complement(2966645..2968282) 1 NC_022364.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; Derived by automated computational analysis using gene prediction method: Protein Homology.; CTP synthetase 2968282 pyrG 16980495 pyrG Escherichia coli LY180 CTP synthetase YP_008565896.1 2966645 R 1335916 CDS YP_008565897.1 544391297 16980496 complement(2968510..2969301) 1 NC_022364.1 functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; Derived by automated computational analysis using gene prediction method: Protein Homology.; nucleoside triphosphate pyrophosphohydrolase 2969301 mazG 16980496 mazG Escherichia coli LY180 nucleoside triphosphate pyrophosphohydrolase YP_008565897.1 2968510 R 1335916 CDS YP_008565898.1 544391298 16980497 complement(2969372..2969707) 1 NC_022364.1 ChpA; endoribonuclease; toxin of the MazF-MazE (ChpA-ChpR) toxin-antitoxin system; Derived by automated computational analysis using gene prediction method: Protein Homology.; toxin 2969707 16980497 LY180_14135 Escherichia coli LY180 toxin YP_008565898.1 2969372 R 1335916 CDS YP_008565899.1 544391299 16980498 complement(2969707..2969955) 1 NC_022364.1 part of the MazF-MazE toxin-antitoxin system; conteracts MazF; Derived by automated computational analysis using gene prediction method: Protein Homology.; antitoxin MazE 2969955 16980498 LY180_14140 Escherichia coli LY180 antitoxin MazE YP_008565899.1 2969707 R 1335916 CDS YP_008565900.1 544391300 16980499 complement(2970033..2972267) 1 NC_022364.1 (p)ppGpp synthetase; catalyzes the formation of pppGpp and ppGpp from ATP and GTP or GDP; Derived by automated computational analysis using gene prediction method: Protein Homology.; GTP pyrophosphokinase 2972267 relA 16980499 relA Escherichia coli LY180 GTP pyrophosphokinase YP_008565900.1 2970033 R 1335916 CDS YP_008565901.1 544391301 16980500 complement(2972315..2973616) 1 NC_022364.1 in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]; Derived by automated computational analysis using gene prediction method: Protein Homology.; 23S rRNA methyltransferase 2973616 rumA 16980500 rumA Escherichia coli LY180 23S rRNA methyltransferase YP_008565901.1 2972315 R 1335916 CDS YP_008565902.1 544391302 16980502 complement(2976661..2978001) 1 NC_022364.1 catalyzes the formation of 5-keto-4-deoxy-D-glucarate from glucarate; Derived by automated computational analysis using gene prediction method: Protein Homology.; glucarate dehydratase 2978001 gudD 16980502 gudD Escherichia coli LY180 glucarate dehydratase YP_008565902.1 2976661 R 1335916 CDS YP_008565903.1 544391303 16980503 complement(2978022..2979362) 1 NC_022364.1 catalyzes the formation of 5-keto-4-deoxy-D-glucarate from glucarate; Derived by automated computational analysis using gene prediction method: Protein Homology.; glucarate dehydratase 2979362 gudD 16980503 gudD Escherichia coli LY180 glucarate dehydratase YP_008565903.1 2978022 R 1335916 CDS YP_008565904.1 544391304 16980504 complement(2979364..2980716) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glucarate transporter 2980716 16980504 LY180_14170 Escherichia coli LY180 glucarate transporter YP_008565904.1 2979364 R 1335916 CDS YP_008565905.1 544391305 16980505 complement(2981151..2981600) 1 NC_022364.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; Derived by automated computational analysis using gene prediction method: Protein Homology.; flavodoxin 2981600 16980505 LY180_14175 Escherichia coli LY180 flavodoxin YP_008565905.1 2981151 R 1335916 CDS YP_008565906.1 544391306 16980506 complement(2981618..2982400) 1 NC_022364.1 catalyzes formation of pseudouridine at position 65 in tRNA-Ile1 and tRNA-Asp; Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA pseudouridine synthase C 2982400 16980506 LY180_14180 Escherichia coli LY180 tRNA pseudouridine synthase C YP_008565906.1 2981618 R 1335916 CDS YP_008565907.1 544391307 16980507 complement(2982400..2982729) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2982729 16980507 LY180_14185 Escherichia coli LY180 hypothetical protein YP_008565907.1 2982400 R 1335916 CDS YP_008565908.1 544393079 16980508 complement(2982976..2983104) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2983104 16980508 LY180_14190 Escherichia coli LY180 hypothetical protein YP_008565908.1 2982976 R 1335916 CDS YP_008565909.1 544391308 16980509 complement(2983351..2983896) 1 NC_022364.1 SecY regulator that either chelates excess SecY or negatively regulates the SecYE translocase function; Derived by automated computational analysis using gene prediction method: Protein Homology.; SecY interacting protein Syd 2983896 16980509 LY180_14195 Escherichia coli LY180 SecY interacting protein Syd YP_008565909.1 2983351 R 1335916 CDS YP_008565910.1 544391309 16980510 2983964..2984812 1 NC_022364.1 catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; 7-cyano-7-deazaguanine reductase 2984812 queF 16980510 queF Escherichia coli LY180 7-cyano-7-deazaguanine reductase YP_008565910.1 2983964 D 1335916 CDS YP_008565911.1 544391310 16980511 2984924..2986288 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LOG family protein ygdH 2986288 16980511 LY180_14205 Escherichia coli LY180 LOG family protein ygdH YP_008565911.1 2984924 D 1335916 CDS YP_008565912.1 544391311 16980512 2986845..2988134 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; serine/threonine transporter 2988134 16980512 LY180_14210 Escherichia coli LY180 serine/threonine transporter YP_008565912.1 2986845 D 1335916 CDS YP_008565913.1 544391312 16980513 2988192..2989559 1 NC_022364.1 catalyzes the formation of pyruvate from serine; Derived by automated computational analysis using gene prediction method: Protein Homology.; L-serine dehydratase 2989559 16980513 LY180_14215 Escherichia coli LY180 L-serine dehydratase YP_008565913.1 2988192 D 1335916 CDS YP_008565914.1 544391313 16980514 2989581..2990426 1 NC_022364.1 similar to flap endonuclease; FEN family; protein from E. coli does not have exonuclease activity; Derived by automated computational analysis using gene prediction method: Protein Homology.; endonuclease 2990426 16980514 LY180_14220 Escherichia coli LY180 endonuclease YP_008565914.1 2989581 D 1335916 CDS YP_008565915.1 544391314 16980515 complement(2990481..2991629) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; L-1,2-propanediol oxidoreductase 2991629 16980515 LY180_14225 Escherichia coli LY180 L-1,2-propanediol oxidoreductase YP_008565915.1 2990481 R 1335916 CDS YP_008565916.1 544391315 16980516 complement(2991657..2992304) 1 NC_022364.1 catalyzes the formation of glycerone phosphate and (S)-lactaldehyde from L-fuculose 1-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; fuculose phosphate aldolase 2992304 16980516 LY180_14230 Escherichia coli LY180 fuculose phosphate aldolase YP_008565916.1 2991657 R 1335916 CDS YP_008565917.1 544391316 16980517 2992851..2994167 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; L-fucose transporter 2994167 16980517 LY180_14235 Escherichia coli LY180 L-fucose transporter YP_008565917.1 2992851 D 1335916 CDS YP_008565918.1 544391317 16980518 2994200..2995975 1 NC_022364.1 catalyzes the conversion of the aldose L-fucose into the corresponding ketose L-fuculose; Derived by automated computational analysis using gene prediction method: Protein Homology.; fucose isomerase 2995975 fucI 16980518 fucI Escherichia coli LY180 fucose isomerase YP_008565918.1 2994200 D 1335916 CDS YP_008565919.1 544391318 16980519 2996054..2997502 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; L-fuculokinase 2997502 16980519 LY180_14245 Escherichia coli LY180 L-fuculokinase YP_008565919.1 2996054 D 1335916 CDS YP_008565920.1 544391319 16980520 2997504..2997926 1 NC_022364.1 catalyzes the interconversion of alpha-L-fucose to beta-L-fucose; Derived by automated computational analysis using gene prediction method: Protein Homology.; L-fucose mutarotase 2997926 fucU 16980520 fucU Escherichia coli LY180 L-fucose mutarotase YP_008565920.1 2997504 D 1335916 CDS YP_008565921.1 544391320 16980521 2997984..2998715 1 NC_022364.1 regulates expression of genes involved in L-fucose utilization; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2998715 16980521 LY180_14255 Escherichia coli LY180 transcriptional regulator YP_008565921.1 2997984 D 1335916 CDS YP_008565922.1 544391321 16980522 complement(2998759..2999859) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 23S rRNA methyltransferase 2999859 16980522 LY180_14260 Escherichia coli LY180 23S rRNA methyltransferase YP_008565922.1 2998759 R 1335916 CDS YP_008565923.1 544391322 16980523 complement(2999852..3000247) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3000247 16980523 LY180_14265 Escherichia coli LY180 membrane protein YP_008565923.1 2999852 R 1335916 CDS YP_008565924.1 544391323 16980524 complement(3000266..3001183) 1 NC_022364.1 Glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 3001183 16980524 LY180_14270 Escherichia coli LY180 transcriptional regulator YP_008565924.1 3000266 R 1335916 CDS YP_008565925.1 544391324 16980525 complement(3001534..3001761) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3001761 16980525 LY180_14275 Escherichia coli LY180 hypothetical protein YP_008565925.1 3001534 R 1335916 CDS YP_008565926.1 544391325 16980526 3001953..3003158 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cysteine sulfinate desulfinase 3003158 16980526 LY180_14280 Escherichia coli LY180 cysteine sulfinate desulfinase YP_008565926.1 3001953 D 1335916 CDS YP_008565927.1 544391326 16980527 3003158..3003601 1 NC_022364.1 binds and activates CsdA; Fe-S protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; CsdA-binding activator 3003601 16980527 LY180_14285 Escherichia coli LY180 CsdA-binding activator YP_008565927.1 3003158 D 1335916 CDS YP_008565928.1 544391327 16980528 complement(3003652..3004458) 1 NC_022364.1 accepts sulfur from CsdA; Derived by automated computational analysis using gene prediction method: Protein Homology.; sulfur acceptor protein CsdL 3004458 16980528 LY180_14290 Escherichia coli LY180 sulfur acceptor protein CsdL YP_008565928.1 3003652 R 1335916 CDS YP_008565929.1 544391328 16980529 complement(3004535..3005632) 1 NC_022364.1 membrane-bound, lytic; catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues; Derived by automated computational analysis using gene prediction method: Protein Homology.; murein transglycosylase A 3005632 mltA 16980529 mltA Escherichia coli LY180 murein transglycosylase A YP_008565929.1 3004535 R 1335916 CDS YP_008565930.1 544391329 16980533 3006772..3007272 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3007272 16980533 LY180_14315 Escherichia coli LY180 hypothetical protein YP_008565930.1 3006772 D 1335916 CDS YP_008565931.1 544393080 16980534 3007331..3008869 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; EvpB/family type VI secretion protein 3008869 16980534 LY180_14320 Escherichia coli LY180 EvpB/family type VI secretion protein YP_008565931.1 3007331 D 1335916 CDS YP_008565932.1 544393081 16980535 3008887..3010224 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3010224 16980535 LY180_14325 Escherichia coli LY180 hypothetical protein YP_008565932.1 3008887 D 1335916 CDS YP_008565933.1 544393082 16980536 3010221..3010886 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; type VI secretion protein ImpK 3010886 16980536 LY180_14330 Escherichia coli LY180 type VI secretion protein ImpK YP_008565933.1 3010221 D 1335916 CDS YP_008565934.1 544393083 16980537 3010899..3012551 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; OmpA family protein 3012551 16980537 LY180_14335 Escherichia coli LY180 OmpA family protein YP_008565934.1 3010899 D 1335916 CDS YP_008565935.1 544393084 16980538 3012609..3013100 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; Hcp family type VI secretion system effector 3013100 16980538 LY180_14340 Escherichia coli LY180 Hcp family type VI secretion system effector YP_008565935.1 3012609 D 1335916 CDS YP_008565936.1 544391330 16980539 3013291..3015936 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; protein disaggregation chaperone 3015936 16980539 LY180_14345 Escherichia coli LY180 protein disaggregation chaperone YP_008565936.1 3013291 D 1335916 CDS YP_008565937.1 544393085 16980540 3015948..3018434 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; type IV secretion protein Rhs 3018434 16980540 LY180_14350 Escherichia coli LY180 type IV secretion protein Rhs YP_008565937.1 3015948 D 1335916 CDS YP_008565938.1 544393086 16980541 3018436..3019287 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3019287 16980541 LY180_14355 Escherichia coli LY180 hypothetical protein YP_008565938.1 3018436 D 1335916 CDS YP_008565939.1 544393087 16980542 3019277..3019813 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3019813 16980542 LY180_14360 Escherichia coli LY180 hypothetical protein YP_008565939.1 3019277 D 1335916 CDS YP_008565940.1 544393088 16980543 3020138..3022645 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; type IV secretion protein Rhs 3022645 16980543 LY180_14365 Escherichia coli LY180 type IV secretion protein Rhs YP_008565940.1 3020138 D 1335916 CDS YP_008565941.1 544393089 16980544 3022846..3023268 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3023268 16980544 LY180_14370 Escherichia coli LY180 hypothetical protein YP_008565941.1 3022846 D 1335916 CDS YP_008565942.1 544393090 16980545 3023270..3023821 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3023821 16980545 LY180_14375 Escherichia coli LY180 hypothetical protein YP_008565942.1 3023270 D 1335916 CDS YP_008565943.1 544393091 16980546 3023899..3025113 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3025113 16980546 LY180_14380 Escherichia coli LY180 hypothetical protein YP_008565943.1 3023899 D 1335916 CDS YP_008565944.1 544393092 16980547 3025113..3028502 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; type VI secretion protein VasK 3028502 16980547 LY180_14385 Escherichia coli LY180 type VI secretion protein VasK YP_008565944.1 3025113 D 1335916 CDS YP_008565945.1 544393093 16980548 3028495..3030105 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3030105 16980548 LY180_14390 Escherichia coli LY180 hypothetical protein YP_008565945.1 3028495 D 1335916 CDS YP_008565946.1 544393094 16980549 3030105..3031028 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; Paar 3031028 16980549 LY180_14395 Escherichia coli LY180 Paar YP_008565946.1 3030105 D 1335916 CDS YP_008565947.1 544393095 16980550 3031025..3031423 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3031423 16980550 LY180_14400 Escherichia coli LY180 hypothetical protein YP_008565947.1 3031025 D 1335916 CDS YP_008565948.1 544393096 16980551 3031478..3031585 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3031585 16980551 LY180_14405 Escherichia coli LY180 hypothetical protein YP_008565948.1 3031478 D 1335916 CDS YP_008565949.1 544393097 16980552 3031736..3032029 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3032029 16980552 LY180_14410 Escherichia coli LY180 hypothetical protein YP_008565949.1 3031736 D 1335916 CDS YP_008565950.1 544393098 16980553 3032130..3033488 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3033488 16980553 LY180_14415 Escherichia coli LY180 hypothetical protein YP_008565950.1 3032130 D 1335916 CDS YP_008565951.1 544391331 16982292 complement(3033963..3034640) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transposase 3034640 16982292 LY180_14420 Escherichia coli LY180 transposase YP_008565951.1 3033963 R 1335916 CDS YP_008565952.1 544393099 16980555 complement(3034829..3035140) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase IS3 3035140 16980555 LY180_14425 Escherichia coli LY180 transposase IS3 YP_008565952.1 3034829 R 1335916 CDS YP_008565953.1 544393100 16980556 3036166..3036588 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3036588 16980556 LY180_14430 Escherichia coli LY180 hypothetical protein YP_008565953.1 3036166 D 1335916 CDS YP_008565954.1 544393101 16980557 3037148..3038908 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; type VI secretion protein ImpG 3038908 16980557 LY180_14435 Escherichia coli LY180 type VI secretion protein ImpG YP_008565954.1 3037148 D 1335916 CDS YP_008565955.1 544393102 16980558 3038872..3039951 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3039951 16980558 LY180_14440 Escherichia coli LY180 hypothetical protein YP_008565955.1 3038872 D 1335916 CDS YP_008565956.1 544393103 16980559 3039932..3040468 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; type VI secretion protein 3040468 16980559 LY180_14445 Escherichia coli LY180 type VI secretion protein YP_008565956.1 3039932 D 1335916 CDS YP_008565957.1 544393104 16980560 3040496..3040900 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3040900 16980560 LY180_14450 Escherichia coli LY180 hypothetical protein YP_008565957.1 3040496 D 1335916 CDS YP_008565958.1 544393105 16980561 3040900..3042276 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; impA family protein 3042276 16980561 LY180_14455 Escherichia coli LY180 impA family protein YP_008565958.1 3040900 D 1335916 CDS YP_008565959.1 544393106 16980562 3042341..3042889 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transcriptional regulator 3042889 16980562 LY180_14460 Escherichia coli LY180 transcriptional regulator YP_008565959.1 3042341 D 1335916 CDS YP_008565960.1 544391332 16980563 complement(3043235..3044488) 1 NC_022364.1 hydrolyzes the bond between N-acetylmuramic acid and amino acid residues in peptidoglycan; Derived by automated computational analysis using gene prediction method: Protein Homology.; N-acetylmuramoyl-L-alanine amidase 3044488 amiC 16980563 amiC Escherichia coli LY180 N-acetylmuramoyl-L-alanine amidase YP_008565960.1 3043235 R 1335916 CDS YP_008565961.1 544391333 16980564 3044720..3046051 1 NC_022364.1 catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; N-acetylglutamate synthase 3046051 16980564 LY180_14470 Escherichia coli LY180 N-acetylglutamate synthase YP_008565961.1 3044720 D 1335916 CDS YP_008565962.1 544391334 16980565 complement(3046113..3047939) 1 NC_022364.1 helicase/nuclease; with RecBC catalyzes the exonucleolytic cleavage of DNA; RecD has 5' to 3' helicase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.; exonuclease V subunit alpha 3047939 recD 16980565 recD Escherichia coli LY180 exonuclease V subunit alpha YP_008565962.1 3046113 R 1335916 CDS YP_008565963.1 544391335 16980566 complement(3047939..3051481) 1 NC_022364.1 helicase/nuclease; with RecCD catalyzes the exonucleolytic cleavage of DNA; RecD has 5' to 3' helicase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.; exonuclease V subunit beta 3051481 recB 16980566 recB Escherichia coli LY180 exonuclease V subunit beta YP_008565963.1 3047939 R 1335916 CDS YP_008565964.1 544391336 16980567 complement(3051474..3054362) 1 NC_022364.1 degrades small peptides; Derived by automated computational analysis using gene prediction method: Protein Homology.; protease 3054362 16980567 LY180_14485 Escherichia coli LY180 protease YP_008565964.1 3051474 R 1335916 CDS YP_008565965.1 544391337 16980568 complement(3054538..3057906) 1 NC_022364.1 catalyzes ATP-dependent exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield 5'-phosphooligonucleotides; component of the RecBCD (Exo V) helicase/nuclease complex that is essential for recombination; Derived by automated computational analysis using gene prediction method: Protein Homology.; exonuclease V subunit gamma 3057906 recC 16980568 recC Escherichia coli LY180 exonuclease V subunit gamma YP_008565965.1 3054538 R 1335916 CDS YP_008565966.1 544391338 16980569 complement(3057919..3058242) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3058242 16980569 LY180_14495 Escherichia coli LY180 hypothetical protein YP_008565966.1 3057919 R 1335916 CDS YP_008565967.1 544391339 16980570 complement(3058227..3058634) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3058634 16980570 LY180_14500 Escherichia coli LY180 hypothetical protein YP_008565967.1 3058227 R 1335916 CDS YP_008565968.1 544391340 16980571 complement(3058631..3059194) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3059194 16980571 LY180_14505 Escherichia coli LY180 hypothetical protein YP_008565968.1 3058631 R 1335916 CDS YP_008565969.1 544391341 16980572 complement(3059185..3059655) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3059655 16980572 LY180_14510 Escherichia coli LY180 hypothetical protein YP_008565969.1 3059185 R 1335916 CDS YP_008565970.1 544391342 16980573 complement(3059840..3060634) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; thymidylate synthase 3060634 16980573 LY180_14515 Escherichia coli LY180 thymidylate synthase YP_008565970.1 3059840 R 1335916 CDS YP_008565971.1 544391343 16980574 complement(3060641..3061516) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; prolipoprotein diacylglyceryl transferase 3061516 16980574 LY180_14520 Escherichia coli LY180 prolipoprotein diacylglyceryl transferase YP_008565971.1 3060641 R 1335916 CDS YP_008565972.1 544391344 16980575 complement(3061667..3063913) 1 NC_022364.1 member of a second PTS chain involved in nitrogen metabolism; PtsP phosphorylates NPr; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoenolpyruvate-protein phosphotransferase 3063913 16980575 LY180_14525 Escherichia coli LY180 phosphoenolpyruvate-protein phosphotransferase YP_008565972.1 3061667 R 1335916 CDS YP_008565973.1 544391345 16980576 complement(3063926..3064456) 1 NC_022364.1 hydrolyzes diadenosine polyphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; RNA pyrophosphohydrolase 3064456 16980576 LY180_14530 Escherichia coli LY180 RNA pyrophosphohydrolase YP_008565973.1 3063926 R 1335916 CDS YP_008565974.1 544391346 16980577 3065141..3065830 1 NC_022364.1 MutH; Sequence-specific endonuclease that cleaves unmethylated GATC sequences during DNA repair; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA mismatch repair protein 3065830 16980577 LY180_14535 Escherichia coli LY180 DNA mismatch repair protein YP_008565974.1 3065141 D 1335916 CDS YP_008565975.1 544391347 16980578 3065899..3066612 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3066612 16980578 LY180_14540 Escherichia coli LY180 membrane protein YP_008565975.1 3065899 D 1335916 CDS YP_008565976.1 544391348 16980579 3066750..3066968 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3066968 16980579 LY180_14545 Escherichia coli LY180 hypothetical protein YP_008565976.1 3066750 D 1335916 CDS YP_008565977.1 544391349 16980580 3067076..3068116 1 NC_022364.1 complements the prephenate dehydrogenase dysfunction of an Escherichia coli tyrosine auxotroph strain; member of the aldo/keto reductase 2 family; crystal structure of purified Escherichia coli protein shows bound NADPH; Derived by automated computational analysis using gene prediction method: Protein Homology.; aldo-keto reductase 3068116 tas 16980580 tas Escherichia coli LY180 aldo-keto reductase YP_008565977.1 3067076 D 1335916 CDS YP_008565978.1 544391350 16980581 complement(3068148..3069341) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; lysophospholipid transporter LplT 3069341 16980581 LY180_14555 Escherichia coli LY180 lysophospholipid transporter LplT YP_008565978.1 3068148 R 1335916 CDS YP_008565979.1 544391351 16980582 complement(3069334..3071493) 1 NC_022364.1 Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3-phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-acyl-glycerophospho-ethanolamine acyltransferase 3071493 16980582 LY180_14560 Escherichia coli LY180 2-acyl-glycerophospho-ethanolamine acyltransferase YP_008565979.1 3069334 R 1335916 CDS YP_008565980.1 544391352 16980583 3072079..3073110 1 NC_022364.1 controls transcription of galETKM; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 3073110 16980583 LY180_14565 Escherichia coli LY180 transcriptional regulator YP_008565980.1 3072079 D 1335916 CDS YP_008565981.1 544391353 16980584 complement(3073117..3074379) 1 NC_022364.1 catalyzes the decarboxylation of diaminopimelate into lysine; pyridoxal phosphate(PLP)-binding; Derived by automated computational analysis using gene prediction method: Protein Homology.; diaminopimelate decarboxylase 3074379 16980584 LY180_14570 Escherichia coli LY180 diaminopimelate decarboxylase YP_008565981.1 3073117 R 1335916 CDS YP_008565982.1 544391354 16980585 3074501..3075436 1 NC_022364.1 activates the transcription of the lysA gene encoding diaminopimelate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 3075436 16980585 LY180_14575 Escherichia coli LY180 transcriptional regulator YP_008565982.1 3074501 D 1335916 CDS YP_008565983.1 544391355 16980586 complement(3075423..3076115) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; racemase 3076115 16980586 LY180_14580 Escherichia coli LY180 racemase YP_008565983.1 3075423 R 1335916 CDS YP_008565984.1 544391356 16980587 complement(3076244..3077662) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; D-galactose transporter 3077662 16980587 LY180_14585 Escherichia coli LY180 D-galactose transporter YP_008565984.1 3076244 R 1335916 CDS YP_008565985.1 544391357 16980588 complement(3077977..3078738) 1 NC_022364.1 catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-deoxy-D-gluconate 3-dehydrogenase 3078738 16980588 LY180_14590 Escherichia coli LY180 2-deoxy-D-gluconate 3-dehydrogenase YP_008565985.1 3077977 R 1335916 CDS YP_008565986.1 544391358 16980589 complement(3078768..3079604) 1 NC_022364.1 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2,5-hexodiulosonate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 5-keto-4-deoxyuronate isomerase 3079604 16980589 LY180_14595 Escherichia coli LY180 5-keto-4-deoxyuronate isomerase YP_008565986.1 3078768 R 1335916 CDS YP_008565987.1 544391359 16980590 complement(3079891..3081072) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acetyl-CoA acetyltransferase 3081072 16980590 LY180_14600 Escherichia coli LY180 acetyl-CoA acetyltransferase YP_008565987.1 3079891 R 1335916 CDS YP_008565988.1 544391360 16980591 3081327..3082556 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 3082556 16980591 LY180_14605 Escherichia coli LY180 transporter YP_008565988.1 3081327 D 1335916 CDS YP_008565989.1 544391361 16980592 3082983..3083648 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3083648 16980592 LY180_14610 Escherichia coli LY180 hypothetical protein YP_008565989.1 3082983 D 1335916 CDS YP_008565990.1 544391362 16980593 3083982..3084791 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3084791 16980593 LY180_14615 Escherichia coli LY180 hypothetical protein YP_008565990.1 3083982 D 1335916 CDS YP_008565991.1 544391363 16980594 3084784..3085266 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3085266 16980594 LY180_14620 Escherichia coli LY180 hypothetical protein YP_008565991.1 3084784 D 1335916 CDS YP_008565992.1 544393107 16980595 complement(3085299..3085379) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3085379 16980595 LY180_14625 Escherichia coli LY180 hypothetical protein YP_008565992.1 3085299 R 1335916 CDS YP_008565993.1 544391364 16980596 complement(3085415..3085840) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3085840 16980596 LY180_14630 Escherichia coli LY180 hypothetical protein YP_008565993.1 3085415 R 1335916 CDS YP_008565994.1 544391365 16980598 3086749..3087240 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3087240 16980598 LY180_14640 Escherichia coli LY180 hypothetical protein YP_008565994.1 3086749 D 1335916 CDS YP_008565995.1 544391366 16980599 3087575..3088951 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 3088951 16980599 LY180_14645 Escherichia coli LY180 transcriptional regulator YP_008565995.1 3087575 D 1335916 CDS YP_008565996.1 544393108 16980600 3089118..3089336 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3089336 16980600 LY180_14650 Escherichia coli LY180 hypothetical protein YP_008565996.1 3089118 D 1335916 CDS YP_008565997.1 544393109 16982299 complement(3089940..3090383) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; LuxR family transcriptional regulator 3090383 16982299 LY180_14655 Escherichia coli LY180 LuxR family transcriptional regulator YP_008565997.1 3089940 R 1335916 CDS YP_008565998.1 544393110 16980602 complement(3090417..3090572) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transcriptional regulator 3090572 16980602 LY180_14660 Escherichia coli LY180 transcriptional regulator YP_008565998.1 3090417 R 1335916 CDS YP_008565999.1 544393111 16980603 complement(3090793..3091224) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3091224 16980603 LY180_14665 Escherichia coli LY180 hypothetical protein YP_008565999.1 3090793 R 1335916 CDS YP_008566000.1 544393112 16980604 complement(3092037..3092573) 1 NC_022364.1 required for invasion of epithelial cells; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; type III secretion system lipoprotein PrgK 3092573 16980604 LY180_14670 Escherichia coli LY180 type III secretion system lipoprotein PrgK YP_008566000.1 3092037 R 1335916 CDS YP_008566001.1 544393113 16980605 complement(3092561..3092680) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3092680 16980605 LY180_14675 Escherichia coli LY180 hypothetical protein YP_008566001.1 3092561 R 1335916 CDS YP_008566002.1 544393114 16980606 complement(3092812..3093099) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; EprJ 3093099 16980606 LY180_14680 Escherichia coli LY180 EprJ YP_008566002.1 3092812 R 1335916 CDS YP_008566003.1 544393115 16980607 complement(3093373..3094563) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; type III secretion protein 3094563 16980607 LY180_14685 Escherichia coli LY180 type III secretion protein YP_008566003.1 3093373 R 1335916 CDS YP_008566004.1 544393116 16980608 3094812..3095243 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; LuxR family transcriptional regulator 3095243 16980608 LY180_14690 Escherichia coli LY180 LuxR family transcriptional regulator YP_008566004.1 3094812 D 1335916 CDS YP_008566005.1 544393117 16980609 3095314..3095607 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; invasion protein 3095607 16980609 LY180_14695 Escherichia coli LY180 invasion protein YP_008566005.1 3095314 D 1335916 CDS YP_008566006.1 544393118 16980610 complement(3095668..3096060) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3096060 16980610 LY180_14700 Escherichia coli LY180 hypothetical protein YP_008566006.1 3095668 R 1335916 CDS YP_008566007.1 544393119 16980611 complement(3096057..3096788) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3096788 16980611 LY180_14705 Escherichia coli LY180 hypothetical protein YP_008566007.1 3096057 R 1335916 CDS YP_008566008.1 544393120 16980612 complement(3096797..3097564) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; type III secretion protein 3097564 16980612 LY180_14710 Escherichia coli LY180 type III secretion protein YP_008566008.1 3096797 R 1335916 CDS YP_008566009.1 544393121 16980613 complement(3097640..3097825) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; type III secretion protein 3097825 16980613 LY180_14715 Escherichia coli LY180 type III secretion protein YP_008566009.1 3097640 R 1335916 CDS YP_008566010.1 544391367 16980614 complement(3097835..3098500) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; type III secretion system protein 3098500 16980614 LY180_14720 Escherichia coli LY180 type III secretion system protein YP_008566010.1 3097835 R 1335916 CDS YP_008566011.1 544393122 16980615 complement(3098490..3098831) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; YscQ/HrcQ family type III secretion apparatus protein 3098831 16980615 LY180_14725 Escherichia coli LY180 YscQ/HrcQ family type III secretion apparatus protein YP_008566011.1 3098490 R 1335916 CDS YP_008566012.1 544393123 16980616 complement(3099072..3099437) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; type III secretion system protein SpaO 3099437 16980616 LY180_14730 Escherichia coli LY180 type III secretion system protein SpaO YP_008566012.1 3099072 R 1335916 CDS YP_008566013.1 544393124 16980617 complement(3099569..3101179) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3101179 16980617 LY180_14735 Escherichia coli LY180 hypothetical protein YP_008566013.1 3099569 R 1335916 CDS YP_008566014.1 544391368 16980619 complement(3101565..3102320) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3102320 16980619 LY180_14745 Escherichia coli LY180 hypothetical protein YP_008566014.1 3101565 R 1335916 CDS YP_008566015.1 544391369 16980620 3102735..3105032 1 NC_022364.1 molybdenum cofactor-binding protein; participates in purine salvage; Derived by automated computational analysis using gene prediction method: Protein Homology.; xanthine dehydrogenase subunit A 3105032 16980620 LY180_14750 Escherichia coli LY180 xanthine dehydrogenase subunit A YP_008566015.1 3102735 D 1335916 CDS YP_008566016.1 544391370 16980621 3105043..3105921 1 NC_022364.1 FAD-binding subunit; with XdhA and XdhC participates in purine salvage; Derived by automated computational analysis using gene prediction method: Protein Homology.; xanthine dehydrogenase subunit B 3105921 16980621 LY180_14755 Escherichia coli LY180 xanthine dehydrogenase subunit B YP_008566016.1 3105043 D 1335916 CDS YP_008566017.1 544391371 16980622 3105918..3106397 1 NC_022364.1 iron-sulfur-binding subunit; with XdhA and XdhB participates in purine salvage; Derived by automated computational analysis using gene prediction method: Protein Homology.; xanthine dehydrogenase subunit C 3106397 16980622 LY180_14760 Escherichia coli LY180 xanthine dehydrogenase subunit C YP_008566017.1 3105918 D 1335916 CDS YP_008566018.1 544391372 16980623 complement(3106437..3108215) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Fis family transcriptional regulator 3108215 16980623 LY180_14765 Escherichia coli LY180 Fis family transcriptional regulator YP_008566018.1 3106437 R 1335916 CDS YP_008566019.1 544391373 16980624 3108691..3109881 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ornithine carbamoyltransferase 3109881 16980624 LY180_14770 Escherichia coli LY180 ornithine carbamoyltransferase YP_008566019.1 3108691 D 1335916 CDS YP_008566020.1 544391374 16980625 3109939..3111135 1 NC_022364.1 catalyzes the formation of pyruvate from 2,3-diaminopropionate; Derived by automated computational analysis using gene prediction method: Protein Homology.; diaminopropionate ammonia-lyase 3111135 16980625 LY180_14775 Escherichia coli LY180 diaminopropionate ammonia-lyase YP_008566020.1 3109939 D 1335916 CDS YP_008566021.1 544391375 16980626 3111193..3112404 1 NC_022364.1 Zn-dependent extracellular dipeptidase; similar to succinyl-diaminopimelate desuccinylases; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidase 3112404 16980626 LY180_14780 Escherichia coli LY180 peptidase YP_008566021.1 3111193 D 1335916 CDS YP_008566022.1 544391376 16980627 3112457..3113842 1 NC_022364.1 catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position; Derived by automated computational analysis using gene prediction method: Protein Homology.; phenylhydantoinase 3113842 16980627 LY180_14785 Escherichia coli LY180 phenylhydantoinase YP_008566022.1 3112457 D 1335916 CDS YP_008566023.1 544391377 16980628 3113890..3114822 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; carbamate kinase 3114822 16980628 LY180_14790 Escherichia coli LY180 carbamate kinase YP_008566023.1 3113890 D 1335916 CDS YP_008566024.1 544391378 16980629 complement(3114863..3116488) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3116488 16980629 LY180_14795 Escherichia coli LY180 hypothetical protein YP_008566024.1 3114863 R 1335916 CDS YP_008566025.1 544391379 16980630 complement(3116536..3117306) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3117306 16980630 LY180_14800 Escherichia coli LY180 hypothetical protein YP_008566025.1 3116536 R 1335916 CDS YP_008566026.1 544391380 16980631 3117409..3117987 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Molybdenum cofactor cytidylyltransferase 3117987 16980631 LY180_14805 Escherichia coli LY180 Molybdenum cofactor cytidylyltransferase YP_008566026.1 3117409 D 1335916 CDS YP_008566027.1 544391381 16980632 3118309..3121407 1 NC_022364.1 with YgfM and YgfN forms a selenate reductase, which seems to catalyze the reduction of selenate to selenite; YgfK mutants are unable to reduce selenate; involved in purine salvage process; seems to act as an oxidoreductase, but sequence similarity suggests it is a dihydrothymine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.; selenate reductase 3121407 16980632 LY180_14810 Escherichia coli LY180 selenate reductase YP_008566027.1 3118309 D 1335916 CDS YP_008566028.1 544391382 16980633 3121410..3122738 1 NC_022364.1 in Escherichia coli expression is induced in response to phase-specific signals and controlled by RpoS; Derived by automated computational analysis using gene prediction method: Protein Homology.; chlorohydrolase/aminohydrolase 3122738 16980633 LY180_14815 Escherichia coli LY180 chlorohydrolase/aminohydrolase YP_008566028.1 3121410 D 1335916 CDS YP_008566029.1 544391383 16980634 3122789..3123568 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase 3123568 16980634 LY180_14820 Escherichia coli LY180 oxidoreductase YP_008566029.1 3122789 D 1335916 CDS YP_008566030.1 544391384 16980635 3123565..3126435 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypoxanthine oxidase 3126435 16980635 LY180_14825 Escherichia coli LY180 hypoxanthine oxidase YP_008566030.1 3123565 D 1335916 CDS YP_008566031.1 544391385 16980636 3126600..3128000 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; xanthine permease 3128000 16980636 LY180_14830 Escherichia coli LY180 xanthine permease YP_008566031.1 3126600 D 1335916 CDS YP_008566032.1 544391386 16980637 3128018..3129334 1 NC_022364.1 Catalyzes the deamination of guanine; Derived by automated computational analysis using gene prediction method: Protein Homology.; guanine deaminase 3129334 16980637 LY180_14835 Escherichia coli LY180 guanine deaminase YP_008566032.1 3128018 D 1335916 CDS YP_008566033.1 544391387 16980638 3129370..3130737 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; permase 3130737 16980638 LY180_14840 Escherichia coli LY180 permase YP_008566033.1 3129370 D 1335916 CDS YP_008566034.1 544391388 16980639 complement(3130773..3131261) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; electron transporter 3131261 16980639 LY180_14845 Escherichia coli LY180 electron transporter YP_008566034.1 3130773 R 1335916 CDS YP_008566035.1 544391389 16980640 complement(3131261..3133180) 1 NC_022364.1 unknown function; in E. coli the aegA gene is regulated by Fnr, NarXL, and NarQ (but not ArcA), induced under anaerobic conditions and repressed in the presence of nitrate (anaerobic); Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase Fe-S binding subunit 3133180 16980640 LY180_14850 Escherichia coli LY180 oxidoreductase Fe-S binding subunit YP_008566035.1 3131261 R 1335916 CDS YP_008566036.1 544391390 16980641 3133616..3135064 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; purine permease 3135064 16980641 LY180_14855 Escherichia coli LY180 purine permease YP_008566036.1 3133616 D 1335916 CDS YP_008566037.1 544393125 16980642 3135054..3135191 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3135191 16980642 LY180_14860 Escherichia coli LY180 hypothetical protein YP_008566037.1 3135054 D 1335916 CDS YP_008566038.1 544391391 16980643 3135314..3135862 1 NC_022364.1 catalyzes the rearrangement of isopentenyl diphosphate to dimethylallyl phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; isopentenyl-diphosphate delta-isomerase 3135862 16980643 LY180_14865 Escherichia coli LY180 isopentenyl-diphosphate delta-isomerase YP_008566038.1 3135314 D 1335916 CDS YP_008566039.1 544391392 16980644 complement(3135905..3137422) 1 NC_022364.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; Derived by automated computational analysis using gene prediction method: Protein Homology.; lysyl-tRNA synthetase 3137422 lysS 16980644 lysS Escherichia coli LY180 lysyl-tRNA synthetase YP_008566039.1 3135905 R 1335916 CDS YP_008566040.1 544391393 16980645 complement(3137432..3138313) 1 NC_022364.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide chain release factor 1 3138313 prfA 16980645 prfA Escherichia coli LY180 peptide chain release factor 1 YP_008566040.1 3137432 R 1335916 CDS YP_008566041.1 544393126 16980646 3138314..3138469 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3138469 16980646 LY180_14880 Escherichia coli LY180 hypothetical protein YP_008566041.1 3138314 D 1335916 CDS YP_008566042.1 544391394 16980647 complement(3138621..3140354) 1 NC_022364.1 5'-3' single-stranded-DNA-specific exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.; ssDNA exonuclease RecJ 3140354 16980647 LY180_14885 Escherichia coli LY180 ssDNA exonuclease RecJ YP_008566042.1 3138621 R 1335916 CDS YP_008566043.1 544391395 16980648 complement(3140360..3141070) 1 NC_022364.1 DsbC; periplasmic protein with protein disulfide isomerase activity; this protein also shows disulfide oxidoreductase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.; protein-disulfide isomerase 3141070 16980648 LY180_14890 Escherichia coli LY180 protein-disulfide isomerase YP_008566043.1 3140360 R 1335916 CDS YP_008566044.1 544391396 16980649 complement(3141095..3141991) 1 NC_022364.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; Derived by automated computational analysis using gene prediction method: Protein Homology.; tyrosine recombinase XerD 3141991 xerD 16980649 xerD Escherichia coli LY180 tyrosine recombinase XerD YP_008566044.1 3141095 R 1335916 CDS YP_008566045.1 544391397 16980650 3142103..3142624 1 NC_022364.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic; Derived by automated computational analysis using gene prediction method: Protein Homology.; flavodoxin 3142624 16980650 LY180_14900 Escherichia coli LY180 flavodoxin YP_008566045.1 3142103 D 1335916 CDS YP_008566046.1 544391398 16980651 complement(3142664..3143071) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3143071 16980651 LY180_14905 Escherichia coli LY180 membrane protein YP_008566046.1 3142664 R 1335916 CDS YP_008566047.1 544391399 16980652 complement(3143052..3143318) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3143318 16980652 LY180_14910 Escherichia coli LY180 hypothetical protein YP_008566047.1 3143052 R 1335916 CDS YP_008566048.1 544393127 16980653 3143311..3143484 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3143484 16980653 LY180_14915 Escherichia coli LY180 hypothetical protein YP_008566048.1 3143311 D 1335916 CDS YP_008566049.1 544391400 16980654 3143561..3144541 1 NC_022364.1 physiological role is not clear; not essential for growth but mutants grow poorly; mutations suppress hda null mutations; may be involved in regulation of ATP-DnaA levels; may also be involved in regulation of tRNA modifications; can bind folic acid and tetrahydrofolate; forms a three domain ring-like structure with a central channel; structurally similar to DMGO protein from A. globiformis; shows sequence similarity to yeast CAF17 transcriptional regulato; Hda supressor; Derived by automated computational analysis using gene prediction method: Protein Homology.; global regulator 3144541 ygfZ 16980654 ygfZ Escherichia coli LY180 global regulator YP_008566049.1 3143561 D 1335916 CDS YP_008566050.1 544391401 16980655 complement(3144618..3145277) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hemolysin 3145277 16980655 LY180_14925 Escherichia coli LY180 hemolysin YP_008566050.1 3144618 R 1335916 CDS YP_008566051.1 544391402 16980656 complement(3145441..3145752) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3145752 16980656 LY180_14930 Escherichia coli LY180 hypothetical protein YP_008566051.1 3145441 R 1335916 CDS YP_008566052.1 544391403 16980657 3145791..3147230 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 6-phospho-beta-glucosidase 3147230 16980657 LY180_14935 Escherichia coli LY180 6-phospho-beta-glucosidase YP_008566052.1 3145791 D 1335916 CDS YP_008566053.1 544391404 16980658 complement(3147287..3148030) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; NAD(P)-binding oxidoreductase 3148030 16980658 LY180_14940 Escherichia coli LY180 NAD(P)-binding oxidoreductase YP_008566053.1 3147287 R 1335916 CDS YP_008566054.1 544391405 16980659 complement(3148296..3151169) 1 NC_022364.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycine dehydrogenase 3151169 16980659 LY180_14945 Escherichia coli LY180 glycine dehydrogenase YP_008566054.1 3148296 R 1335916 CDS YP_008566055.1 544391406 16980660 complement(3151288..3151677) 1 NC_022364.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycine cleavage system protein H 3151677 16980660 LY180_14950 Escherichia coli LY180 glycine cleavage system protein H YP_008566055.1 3151288 R 1335916 CDS YP_008566056.1 544391407 16980661 complement(3151701..3152795) 1 NC_022364.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycine cleavage system aminomethyltransferase T 3152795 gcvT 16980661 gcvT Escherichia coli LY180 glycine cleavage system aminomethyltransferase T YP_008566056.1 3151701 R 1335916 CDS YP_008566057.1 544391408 16980662 complement(3153242..3154444) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-octaprenyl-6-methoxyphenyl hydroxylase 3154444 16980662 LY180_14960 Escherichia coli LY180 2-octaprenyl-6-methoxyphenyl hydroxylase YP_008566057.1 3153242 R 1335916 CDS YP_008566058.1 544391409 16980663 complement(3154467..3155645) 1 NC_022364.1 Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1,4-benzoquinone; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-octaprenyl-6-methoxyphenyl hydroxylase 3155645 16980663 LY180_14965 Escherichia coli LY180 2-octaprenyl-6-methoxyphenyl hydroxylase YP_008566058.1 3154467 R 1335916 CDS YP_008566059.1 544391410 16980664 complement(3155642..3156967) 1 NC_022364.1 exopeptidase able to cleave the peptide bond of the last amino acid if linked to a proline residue; substrate can be as short as a dipeptide; Derived by automated computational analysis using gene prediction method: Protein Homology.; proline aminopeptidase P II 3156967 16980664 LY180_14970 Escherichia coli LY180 proline aminopeptidase P II YP_008566059.1 3155642 R 1335916 CDS YP_008566060.1 544391411 16980665 complement(3156993..3157571) 1 NC_022364.1 the crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers; function unknown; Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3157571 16980665 LY180_14975 Escherichia coli LY180 hypothetical protein YP_008566060.1 3156993 R 1335916 CDS YP_008566061.1 544391412 16980666 3157739..3158068 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Z-ring-associated protein 3158068 16980666 LY180_14980 Escherichia coli LY180 Z-ring-associated protein YP_008566061.1 3157739 D 1335916 CDS YP_008566062.1 544391413 16980667 3158368..3158916 1 NC_022364.1 ygfA expression increases five to eight fold in Escherichia coli cells growing as biofilms; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.; 5-formyltetrahydrofolate cyclo-ligase 3158916 16980667 LY180_14985 Escherichia coli LY180 5-formyltetrahydrofolate cyclo-ligase YP_008566062.1 3158368 D 1335916 CDS YP_008566063.1 544391414 16980668 complement(3159697..3160929) 1 NC_022364.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-phosphoglycerate dehydrogenase 3160929 16980668 LY180_14990 Escherichia coli LY180 3-phosphoglycerate dehydrogenase YP_008566063.1 3159697 R 1335916 CDS YP_008566064.1 544391415 16980669 complement(3161184..3161879) 1 NC_022364.1 catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribose 5-phosphate isomerase 3161879 16980669 LY180_14995 Escherichia coli LY180 ribose 5-phosphate isomerase YP_008566064.1 3161184 R 1335916 CDS YP_008566065.1 544393128 16980670 complement(3161899..3162129) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3162129 16980670 LY180_15000 Escherichia coli LY180 hypothetical protein YP_008566065.1 3161899 R 1335916 CDS YP_008566066.1 544391416 16980671 3162271..3163164 1 NC_022364.1 specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology.; chromosome replication initiation inhibitor protein 3163164 16980671 LY180_15005 Escherichia coli LY180 chromosome replication initiation inhibitor protein YP_008566066.1 3162271 D 1335916 CDS YP_008566067.1 544391417 16980672 3163368..3165512 1 NC_022364.1 MDM; functions in conversion of succinate to propionate; Derived by automated computational analysis using gene prediction method: Protein Homology.; methylmalonyl-CoA mutase 3165512 16980672 LY180_15010 Escherichia coli LY180 methylmalonyl-CoA mutase YP_008566067.1 3163368 D 1335916 CDS YP_008566068.1 544391418 16980673 3165505..3166500 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; protein kinase 3166500 16980673 LY180_15015 Escherichia coli LY180 protein kinase YP_008566068.1 3165505 D 1335916 CDS YP_008566069.1 544391419 16980674 3166511..3167296 1 NC_022364.1 catalyzes the formation of propanoyl-CoA from methylmalonyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.; methylmalonyl-CoA decarboxylase 3167296 16980674 LY180_15020 Escherichia coli LY180 methylmalonyl-CoA decarboxylase YP_008566069.1 3166511 D 1335916 CDS YP_008566070.1 544391420 16980675 3167320..3168798 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acetyl-CoA hydrolase 3168798 16980675 LY180_15025 Escherichia coli LY180 acetyl-CoA hydrolase YP_008566070.1 3167320 D 1335916 CDS YP_008566071.1 544391421 16980676 complement(3168795..3169691) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LysR family transcriptional regulator 3169691 16980676 LY180_15030 Escherichia coli LY180 LysR family transcriptional regulator YP_008566071.1 3168795 R 1335916 CDS YP_008566072.1 544391422 16980677 complement(3169858..3170598) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidative stress defense protein 3170598 16980677 LY180_15035 Escherichia coli LY180 oxidative stress defense protein YP_008566072.1 3169858 R 1335916 CDS YP_008566073.1 544391423 16980678 complement(3170691..3171326) 1 NC_022364.1 Involved in the export of arginine; Derived by automated computational analysis using gene prediction method: Protein Homology.; arginine exporter protein 3171326 16980678 LY180_15040 Escherichia coli LY180 arginine exporter protein YP_008566073.1 3170691 R 1335916 CDS YP_008566074.1 544391424 16980679 complement(3171465..3172325) 1 NC_022364.1 participates in the regulation of osmotic pressure changes within the cel; Derived by automated computational analysis using gene prediction method: Protein Homology.; mechanosensitive channel MscS 3172325 16980679 LY180_15045 Escherichia coli LY180 mechanosensitive channel MscS YP_008566074.1 3171465 R 1335916 CDS YP_008566075.1 544391425 16980680 complement(3172348..3172620) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3172620 16980680 LY180_15050 Escherichia coli LY180 hypothetical protein YP_008566075.1 3172348 R 1335916 CDS YP_008566076.1 544391426 16980681 complement(3172683..3173762) 1 NC_022364.1 catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; fructose-bisphosphate aldolase 3173762 16980681 LY180_15055 Escherichia coli LY180 fructose-bisphosphate aldolase YP_008566076.1 3172683 R 1335916 CDS YP_008566077.1 544391427 16980682 complement(3173977..3175140) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoglycerate kinase 3175140 16980682 LY180_15060 Escherichia coli LY180 phosphoglycerate kinase YP_008566077.1 3173977 R 1335916 CDS YP_008566078.1 544391428 16980683 complement(3175190..3176209) 1 NC_022364.1 required for glycolysis; catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; glyceraldehyde-3-phosphate dehydrogenase 3176209 gapA 16980683 gapA Escherichia coli LY180 glyceraldehyde-3-phosphate dehydrogenase YP_008566078.1 3175190 R 1335916 CDS YP_008566079.1 544391429 16980684 3176581..3177012 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA-binding protein 3177012 16980684 LY180_15070 Escherichia coli LY180 DNA-binding protein YP_008566079.1 3176581 D 1335916 CDS YP_008566080.1 544391430 16980685 3177035..3177613 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3177613 16980685 LY180_15075 Escherichia coli LY180 membrane protein YP_008566080.1 3177035 D 1335916 CDS YP_008566081.1 544391431 16980686 3177614..3178321 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cobalt ABC transporter permease 3178321 16980686 LY180_15080 Escherichia coli LY180 cobalt ABC transporter permease YP_008566081.1 3177614 D 1335916 CDS YP_008566082.1 544391432 16980687 3178303..3178986 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cobalt ABC transporter ATP-binding protein 3178986 16980687 LY180_15085 Escherichia coli LY180 cobalt ABC transporter ATP-binding protein YP_008566082.1 3178303 D 1335916 CDS YP_008566083.1 544391433 16980688 3178980..3179657 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ABC transporter ATP-binding protein 3179657 16980688 LY180_15090 Escherichia coli LY180 ABC transporter ATP-binding protein YP_008566083.1 3178980 D 1335916 CDS YP_008566084.1 544391434 16980689 complement(3179629..3180342) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; nucleoside triphosphate hydrolase 3180342 16980689 LY180_15095 Escherichia coli LY180 nucleoside triphosphate hydrolase YP_008566084.1 3179629 R 1335916 CDS YP_008566085.1 544391435 16980690 complement(3180339..3180848) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; mannitol repressor 3180848 16980690 LY180_15100 Escherichia coli LY180 mannitol repressor YP_008566085.1 3180339 R 1335916 CDS YP_008566086.1 544391436 16980691 complement(3180870..3181835) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fructose 1,6-bisphosphatase 3181835 16980691 LY180_15105 Escherichia coli LY180 fructose 1,6-bisphosphatase YP_008566086.1 3180870 R 1335916 CDS YP_008566087.1 544391437 16980692 complement(3181832..3183109) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; L-sorbose 1-phosphate reductase 3183109 16980692 LY180_15110 Escherichia coli LY180 L-sorbose 1-phosphate reductase YP_008566087.1 3181832 R 1335916 CDS YP_008566088.1 544391438 16980693 complement(3183124..3184512) 1 NC_022364.1 CmtA with CmtB possibly forms the mannitol-like permease component of the cryptic mannitol phosphotransferase system, which phosphorylates and transports various carbohydrates and polyhydric alcohols in Escherichia coli; cytoplasmic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS mannitol transporter subunit IIBC 3184512 16980693 LY180_15115 Escherichia coli LY180 PTS mannitol transporter subunit IIBC YP_008566088.1 3183124 R 1335916 CDS YP_008566089.1 544391439 16980694 complement(3184540..3184983) 1 NC_022364.1 TolM; with CmtA (IIBC), CmtB possibly forms the mannitol-like permease component of the cryptic mannitol phosphotransferase system, which phosphorylates and transports various carbohydrates and polyhydric alcohols in Escherichia coli; cytoplasmic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS mannitol transporter subunit IIA 3184983 cmtB 16980694 cmtB Escherichia coli LY180 PTS mannitol transporter subunit IIA YP_008566089.1 3184540 R 1335916 CDS YP_008566090.1 544391440 16980695 complement(3185297..3187288) 1 NC_022364.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology.; transketolase 3187288 16980695 LY180_15125 Escherichia coli LY180 transketolase YP_008566090.1 3185297 R 1335916 CDS YP_008566091.1 544391441 16980696 3187566..3188324 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; metalloprotease 3188324 16980696 LY180_15130 Escherichia coli LY180 metalloprotease YP_008566091.1 3187566 D 1335916 CDS YP_008566092.1 544391442 16980697 complement(3188530..3189450) 1 NC_022364.1 catalyzes the formation of putrescine from agmatine; Derived by automated computational analysis using gene prediction method: Protein Homology.; agmatinase 3189450 16980697 LY180_15135 Escherichia coli LY180 agmatinase YP_008566092.1 3188530 R 1335916 CDS YP_008566093.1 544391443 16980698 complement(3189586..3189960) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3189960 16980698 LY180_15140 Escherichia coli LY180 membrane protein YP_008566093.1 3189586 R 1335916 CDS YP_008566094.1 544391444 16980699 complement(3190084..3190587) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; insB 3190587 16980699 LY180_15145 Escherichia coli LY180 insB YP_008566094.1 3190084 R 1335916 CDS YP_008566095.1 544393129 16980700 complement(3190810..3191094) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3191094 16980700 LY180_15150 Escherichia coli LY180 hypothetical protein YP_008566095.1 3190810 R 1335916 CDS YP_008566096.1 544391445 16980701 complement(3191240..3193216) 1 NC_022364.1 catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; arginine decarboxylase 3193216 16980701 LY180_15155 Escherichia coli LY180 arginine decarboxylase YP_008566096.1 3191240 R 1335916 CDS YP_008566097.1 544391446 16980702 complement(3193225..3193371) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3193371 16980702 LY180_15160 Escherichia coli LY180 hypothetical protein YP_008566097.1 3193225 R 1335916 CDS YP_008566098.1 544391447 16980703 3194011..3195165 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; S-adenosylmethionine synthetase 3195165 16980703 LY180_15165 Escherichia coli LY180 S-adenosylmethionine synthetase YP_008566098.1 3194011 D 1335916 CDS YP_008566099.1 544391448 16980704 3195601..3196995 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; D-galactose transporter 3196995 16980704 LY180_15170 Escherichia coli LY180 D-galactose transporter YP_008566099.1 3195601 D 1335916 CDS YP_008566100.1 544391449 16980705 3197072..3197569 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3197569 16980705 LY180_15175 Escherichia coli LY180 hypothetical protein YP_008566100.1 3197072 D 1335916 CDS YP_008566101.1 544391450 16980706 3197664..3198371 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; endonuclease 3198371 16980706 LY180_15180 Escherichia coli LY180 endonuclease YP_008566101.1 3197664 D 1335916 CDS YP_008566102.1 544391451 16980707 3198451..3199182 1 NC_022364.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.; 16S rRNA methyltransferase 3199182 16980707 LY180_15185 Escherichia coli LY180 16S rRNA methyltransferase YP_008566102.1 3198451 D 1335916 CDS YP_008566103.1 544391452 16980708 3199195..3200145 1 NC_022364.1 catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutathione synthetase 3200145 16980708 LY180_15190 Escherichia coli LY180 glutathione synthetase YP_008566103.1 3199195 D 1335916 CDS YP_008566104.1 544391453 16980709 3200254..3200817 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3200817 16980709 LY180_15195 Escherichia coli LY180 hypothetical protein YP_008566104.1 3200254 D 1335916 CDS YP_008566105.1 544391454 16980710 3200817..3201233 1 NC_022364.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Derived by automated computational analysis using gene prediction method: Protein Homology.; Holliday junction resolvase 3201233 16980710 LY180_15200 Escherichia coli LY180 Holliday junction resolvase YP_008566105.1 3200817 D 1335916 CDS YP_008566106.1 544391455 16980711 complement(3201409..3202389) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3202389 16980711 LY180_15205 Escherichia coli LY180 hypothetical protein YP_008566106.1 3201409 R 1335916 CDS YP_008566107.1 544391456 16980712 3202407..3203111 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3203111 16980712 LY180_15210 Escherichia coli LY180 hypothetical protein YP_008566107.1 3202407 D 1335916 CDS YP_008566108.1 544391457 16980713 3203129..3203695 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3203695 16980713 LY180_15215 Escherichia coli LY180 hypothetical protein YP_008566108.1 3203129 D 1335916 CDS YP_008566109.1 544391458 16980714 3203692..3203982 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3203982 16980714 LY180_15220 Escherichia coli LY180 hypothetical protein YP_008566109.1 3203692 D 1335916 CDS YP_008566110.1 544391459 16980715 3203990..3204583 1 NC_022364.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; Derived by automated computational analysis using gene prediction method: Protein Homology.; nucleoside-triphosphate diphosphatase 3204583 16980715 LY180_15225 Escherichia coli LY180 nucleoside-triphosphate diphosphatase YP_008566110.1 3203990 D 1335916 CDS YP_008566111.1 544391460 16980716 3204576..3205712 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; HemN family oxidoreductase 3205712 16980716 LY180_15230 Escherichia coli LY180 HemN family oxidoreductase YP_008566111.1 3204576 D 1335916 CDS YP_008566112.1 544391461 16980717 complement(3205867..3206874) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3206874 16980717 LY180_15235 Escherichia coli LY180 hypothetical protein YP_008566112.1 3205867 R 1335916 CDS YP_008566113.1 544391462 16980718 complement(3206991..3208037) 1 NC_022364.1 catalyzes the formation of aspartate from asparagine, periplasmic; regulated by cyclic AMP receptor protein (CRP) and also induced by anaerobiosis; Derived by automated computational analysis using gene prediction method: Protein Homology.; L-asparaginase 3208037 ansB 16980718 ansB Escherichia coli LY180 L-asparaginase YP_008566113.1 3206991 R 1335916 CDS YP_008566114.1 544391463 16980719 complement(3208213..3208932) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3208932 16980719 LY180_15245 Escherichia coli LY180 hypothetical protein YP_008566114.1 3208213 R 1335916 CDS YP_008566115.1 544393130 16980720 complement(3208953..3209093) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3209093 16980720 LY180_15250 Escherichia coli LY180 hypothetical protein YP_008566115.1 3208953 R 1335916 CDS YP_008566116.1 544391464 16980721 complement(3209116..3209442) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3209442 16980721 LY180_15255 Escherichia coli LY180 hypothetical protein YP_008566116.1 3209116 R 1335916 CDS YP_008566117.1 544391465 16980722 complement(3209442..3210161) 1 NC_022364.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA (guanine-N(7)-)-methyltransferase 3210161 trmB 16980722 trmB Escherichia coli LY180 tRNA (guanine-N(7)-)-methyltransferase YP_008566117.1 3209442 R 1335916 CDS YP_008566118.1 544391466 16980723 3210322..3211374 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; adenine DNA glycosylase 3211374 16980723 LY180_15265 Escherichia coli LY180 adenine DNA glycosylase YP_008566118.1 3210322 D 1335916 CDS YP_008566119.1 544391467 16980724 3211402..3211677 1 NC_022364.1 protects iron-sulfur proteins against oxidative damage; Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidative damage protection protein 3211677 16980724 LY180_15270 Escherichia coli LY180 oxidative damage protection protein YP_008566119.1 3211402 D 1335916 CDS YP_008566120.1 544391468 16980725 3211742..3212821 1 NC_022364.1 Murein hydrolase C; membrane-bound; lytic; catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues; Derived by automated computational analysis using gene prediction method: Protein Homology.; murein transglycosylase C 3212821 mltC 16980725 mltC Escherichia coli LY180 murein transglycosylase C YP_008566120.1 3211742 D 1335916 CDS YP_008566121.1 544391469 16980726 3213023..3214279 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; nucleoside permease 3214279 16980726 LY180_15280 Escherichia coli LY180 nucleoside permease YP_008566121.1 3213023 D 1335916 CDS YP_008566122.1 544391470 16980727 complement(3214329..3216464) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ornithine decarboxylase 3216464 16980727 LY180_15285 Escherichia coli LY180 ornithine decarboxylase YP_008566122.1 3214329 R 1335916 CDS YP_008566123.1 544391471 16980728 3216862..3217569 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3217569 16980728 LY180_15290 Escherichia coli LY180 membrane protein YP_008566123.1 3216862 D 1335916 CDS YP_008566124.1 544391472 16980730 complement(3217899..3218435) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; general secretion pathway protein 3218435 16980730 LY180_15300 Escherichia coli LY180 general secretion pathway protein YP_008566124.1 3217899 R 1335916 CDS YP_008566125.1 544393131 16980731 complement(3218437..3219615) 1 NC_022364.1 similar to general secretory pathway protein L; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; GspL 3219615 16980731 LY180_15305 Escherichia coli LY180 GspL YP_008566125.1 3218437 R 1335916 CDS YP_008566126.1 544393132 16980732 complement(3219612..3220589) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; type II secretion system protein 3220589 16980732 LY180_15310 Escherichia coli LY180 type II secretion system protein YP_008566126.1 3219612 R 1335916 CDS YP_008566127.1 544393133 16980733 complement(3220586..3221155) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; general secretion pathway protein J 3221155 16980733 LY180_15315 Escherichia coli LY180 general secretion pathway protein J YP_008566127.1 3220586 R 1335916 CDS YP_008566128.1 544393134 16980734 complement(3221188..3221559) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; type II secretion system protein 3221559 16980734 LY180_15320 Escherichia coli LY180 type II secretion system protein YP_008566128.1 3221188 R 1335916 CDS YP_008566129.1 544393135 16980735 complement(3221556..3222119) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; general secretion pathway protein H 3222119 16980735 LY180_15325 Escherichia coli LY180 general secretion pathway protein H YP_008566129.1 3221556 R 1335916 CDS YP_008566130.1 544391473 16980736 complement(3222123..3222578) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; general secretion pathway protein G 3222578 16980736 LY180_15330 Escherichia coli LY180 general secretion pathway protein G YP_008566130.1 3222123 R 1335916 CDS YP_008566131.1 544391474 16980737 complement(3222595..3223818) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; general secretion pathway protein F 3223818 16980737 LY180_15335 Escherichia coli LY180 general secretion pathway protein F YP_008566131.1 3222595 R 1335916 CDS YP_008566132.1 544391475 16980738 complement(3223818..3225311) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3225311 16980738 LY180_15340 Escherichia coli LY180 hypothetical protein YP_008566132.1 3223818 R 1335916 CDS YP_008566133.1 544391476 16980739 complement(3225311..3227371) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; secretion system protein D 3227371 16980739 LY180_15345 Escherichia coli LY180 secretion system protein D YP_008566133.1 3225311 R 1335916 CDS YP_008566134.1 544393136 16980740 complement(3227401..3228231) 1 NC_022364.1 part of the general (type II) secretion pathway (GSP), a signal sequence-dependent process responsible for protein export; involved in trans-location of exoproteins from the cytoplasm to the periplasm; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; type II secretion system protein C 3228231 16980740 LY180_15350 Escherichia coli LY180 type II secretion system protein C YP_008566134.1 3227401 R 1335916 CDS YP_008566135.1 544391477 16980741 complement(3228378..3228788) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3228788 16980741 LY180_15355 Escherichia coli LY180 hypothetical protein YP_008566135.1 3228378 R 1335916 CDS YP_008566136.1 544391478 16980742 complement(3228854..3229663) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidase A24 3229663 16980742 LY180_15360 Escherichia coli LY180 peptidase A24 YP_008566136.1 3228854 R 1335916 CDS YP_008566137.1 544393137 16980743 complement(3229811..3234241) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; Accessory colonization factor AcfD 3234241 16980743 LY180_15365 Escherichia coli LY180 Accessory colonization factor AcfD YP_008566137.1 3229811 R 1335916 CDS YP_008566138.1 544391479 16980744 complement(3234859..3236541) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; L-lactate permease 3236541 16980744 LY180_15370 Escherichia coli LY180 L-lactate permease YP_008566138.1 3234859 R 1335916 CDS YP_008566139.1 544391480 16980745 complement(3236897..3239068) 1 NC_022364.1 catalyzes the formation of malate from glyoxylate and acetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.; malate synthase 3239068 16980745 LY180_15375 Escherichia coli LY180 malate synthase YP_008566139.1 3236897 R 1335916 CDS YP_008566140.1 544391481 16980746 complement(3239090..3239494) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3239494 16980746 LY180_15380 Escherichia coli LY180 hypothetical protein YP_008566140.1 3239090 R 1335916 CDS YP_008566141.1 544391482 16980747 complement(3239499..3240722) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glycolate oxidase 3240722 glcF 16980747 glcF Escherichia coli LY180 glycolate oxidase YP_008566141.1 3239499 R 1335916 CDS YP_008566142.1 544391483 16980748 complement(3240733..3241785) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; FAD-binding protein 3241785 glcE 16980748 glcE Escherichia coli LY180 FAD-binding protein YP_008566142.1 3240733 R 1335916 CDS YP_008566143.1 544391484 16980749 complement(3241785..3243284) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; FAD-binding protein 3243284 16980749 LY180_15395 Escherichia coli LY180 FAD-binding protein YP_008566143.1 3241785 R 1335916 CDS YP_008566144.1 544393138 16980750 complement(3244306..3245448) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; DNA-binding protein 3245448 16980750 LY180_15400 Escherichia coli LY180 DNA-binding protein YP_008566144.1 3244306 R 1335916 CDS YP_008566145.1 544393139 16980751 3245852..3247540 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3247540 16980751 LY180_15405 Escherichia coli LY180 hypothetical protein YP_008566145.1 3245852 D 1335916 CDS YP_008566146.1 544393140 16980752 3247537..3248451 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3248451 16980752 LY180_15410 Escherichia coli LY180 hypothetical protein YP_008566146.1 3247537 D 1335916 CDS YP_008566147.1 544393141 16980753 3248504..3248731 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3248731 16980753 LY180_15415 Escherichia coli LY180 hypothetical protein YP_008566147.1 3248504 D 1335916 CDS YP_008566148.1 544393142 16980754 3248731..3249903 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; 8-amino-7-oxononanoate synthase 3249903 16980754 LY180_15420 Escherichia coli LY180 8-amino-7-oxononanoate synthase YP_008566148.1 3248731 D 1335916 CDS YP_008566149.1 544393143 16980755 complement(3249938..3251017) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; permease 3251017 16980755 LY180_15425 Escherichia coli LY180 permease YP_008566149.1 3249938 R 1335916 CDS YP_008566150.1 544393144 16980756 complement(3251014..3252084) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; permease 3252084 16980756 LY180_15430 Escherichia coli LY180 permease YP_008566150.1 3251014 R 1335916 CDS YP_008566151.1 544391485 16980757 complement(3252115..3252675) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3252675 16980757 LY180_15435 Escherichia coli LY180 hypothetical protein YP_008566151.1 3252115 R 1335916 CDS YP_008566152.1 544393145 16980758 complement(3252687..3253511) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3253511 16980758 LY180_15440 Escherichia coli LY180 hypothetical protein YP_008566152.1 3252687 R 1335916 CDS YP_008566153.1 544391486 16980759 complement(3253511..3254860) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3254860 16980759 LY180_15445 Escherichia coli LY180 membrane protein YP_008566153.1 3253511 R 1335916 CDS YP_008566154.1 544391487 16980760 complement(3254906..3255664) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3255664 16980760 LY180_15450 Escherichia coli LY180 hypothetical protein YP_008566154.1 3254906 R 1335916 CDS YP_008566155.1 544391488 16980761 complement(3255696..3256409) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3256409 16980761 LY180_15455 Escherichia coli LY180 hypothetical protein YP_008566155.1 3255696 R 1335916 CDS YP_008566156.1 544391489 16980762 3256583..3257275 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-binding protein 3257275 16980762 LY180_15460 Escherichia coli LY180 ATP-binding protein YP_008566156.1 3256583 D 1335916 CDS YP_008566157.1 544391490 16980763 complement(3257329..3258828) 1 NC_022364.1 involved in the transport of inorganic phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphate transporter PitA 3258828 16980763 LY180_15465 Escherichia coli LY180 phosphate transporter PitA YP_008566157.1 3257329 R 1335916 CDS YP_008566158.1 544391491 16980764 complement(3259120..3260979) 1 NC_022364.1 catalyzes the formation of glutathionylspermidine from glutathione and spermidine; also catalyzes the reverse reaction; Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase 3260979 16980764 LY180_15470 Escherichia coli LY180 bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase YP_008566158.1 3259120 R 1335916 CDS YP_008566159.1 544391492 16980765 3261184..3262050 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; GSH-dependent disulfide bond oxidoreductase 3262050 16980765 LY180_15475 Escherichia coli LY180 GSH-dependent disulfide bond oxidoreductase YP_008566159.1 3261184 D 1335916 CDS YP_008566160.1 544391493 16980766 complement(3262173..3262421) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrogenase 2 accessory protein HypG 3262421 16980766 LY180_15480 Escherichia coli LY180 hydrogenase 2 accessory protein HypG YP_008566160.1 3262173 R 1335916 CDS YP_008566161.1 544391494 16980767 complement(3262434..3262775) 1 NC_022364.1 plays a role in hydrogenase nickel cofactor insertion; Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrogenase nickel incorporation protein 3262775 hypA 16980767 hypA Escherichia coli LY180 hydrogenase nickel incorporation protein YP_008566161.1 3262434 R 1335916 CDS YP_008566162.1 544391495 16980768 complement(3262768..3263256) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrogenase 3263256 16980768 LY180_15490 Escherichia coli LY180 hydrogenase YP_008566162.1 3262768 R 1335916 CDS YP_008566163.1 544391496 16980769 complement(3263249..3263743) 1 NC_022364.1 protease responsible for the cleavage of a 15 amino acid peptide from the C-terminal end of the large subunit of hydrogenase 2 (HybC); Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrogenase 2 maturation endopeptidase 3263743 hybD 16980769 hybD Escherichia coli LY180 hydrogenase 2 maturation endopeptidase YP_008566163.1 3263249 R 1335916 CDS YP_008566164.1 544391497 16980770 complement(3263743..3265446) 1 NC_022364.1 involved in hydrogen uptake; Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrogenase 2 large subunit 3265446 16980770 LY180_15500 Escherichia coli LY180 hydrogenase 2 large subunit YP_008566164.1 3263743 R 1335916 CDS YP_008566165.1 544391498 16980771 complement(3265443..3266621) 1 NC_022364.1 HybB; cytochrome b subunit of the hydrogenase 2 enzyme, composed of HybA, B, C, and O subunits; Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrogenase 2 b cytochrome subunit 3266621 16980771 LY180_15505 Escherichia coli LY180 hydrogenase 2 b cytochrome subunit YP_008566165.1 3265443 R 1335916 CDS YP_008566166.1 544391499 16980772 complement(3266611..3267597) 1 NC_022364.1 Fe-S ferrodoxin type component; participates in the periplasmic electron-transferring activity of hydrogenase 2; Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrogenase 3267597 16980772 LY180_15510 Escherichia coli LY180 hydrogenase YP_008566166.1 3266611 R 1335916 CDS YP_008566167.1 544391500 16980773 complement(3267600..3268718) 1 NC_022364.1 involved in hydrogen uptake; Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrogenase 2 small subunit 3268718 16980773 LY180_15515 Escherichia coli LY180 hydrogenase 2 small subunit YP_008566167.1 3267600 R 1335916 CDS YP_008566168.1 544391501 16980774 complement(3268907..3269194) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3269194 16980774 LY180_15520 Escherichia coli LY180 hypothetical protein YP_008566168.1 3268907 R 1335916 CDS YP_008566169.1 544391502 16980775 complement(3269313..3270200) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; dienelactone hydrolase 3270200 16980775 LY180_15525 Escherichia coli LY180 dienelactone hydrolase YP_008566169.1 3269313 R 1335916 CDS YP_008566170.1 544391503 16980776 3270357..3271397 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; L-glyceraldehyde 3-phosphate reductase 3271397 16980776 LY180_15530 Escherichia coli LY180 L-glyceraldehyde 3-phosphate reductase YP_008566170.1 3270357 D 1335916 CDS YP_008566171.1 544391504 16980777 complement(3271437..3271931) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3271931 16980777 LY180_15535 Escherichia coli LY180 membrane protein YP_008566171.1 3271437 R 1335916 CDS YP_008566172.1 544391505 16980778 3272122..3273006 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase 3273006 16980778 LY180_15540 Escherichia coli LY180 oxidoreductase YP_008566172.1 3272122 D 1335916 CDS YP_008566173.1 544391506 16980779 complement(3273278..3273703) 1 NC_022364.1 membrane spanning protein in TonB-ExbB-ExbD complex; involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; biopolymer transporter ExbD 3273703 16980779 LY180_15545 Escherichia coli LY180 biopolymer transporter ExbD YP_008566173.1 3273278 R 1335916 CDS YP_008566174.1 544391507 16980780 complement(3273710..3274444) 1 NC_022364.1 membrane spanning protein in TonB-ExbB-ExbD complex; involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; biopolymer transporter ExbB 3274444 16980780 LY180_15550 Escherichia coli LY180 biopolymer transporter ExbB YP_008566174.1 3273710 R 1335916 CDS YP_008566175.1 544393146 16980781 complement(3274437..3274652) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3274652 16980781 LY180_15555 Escherichia coli LY180 hypothetical protein YP_008566175.1 3274437 R 1335916 CDS YP_008566176.1 544391508 16980782 3274695..3275882 1 NC_022364.1 catalyzes the formation of L-homocysteine from cystathionine; Derived by automated computational analysis using gene prediction method: Protein Homology.; cystathionine beta-lyase 3275882 16980782 LY180_15560 Escherichia coli LY180 cystathionine beta-lyase YP_008566176.1 3274695 D 1335916 CDS YP_008566177.1 544391509 16980783 3276022..3276681 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3276681 16980783 LY180_15565 Escherichia coli LY180 membrane protein YP_008566177.1 3276022 D 1335916 CDS YP_008566178.1 544391510 16980784 complement(3276721..3277677) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; AraC family transcriptional regulator 3277677 16980784 LY180_15570 Escherichia coli LY180 AraC family transcriptional regulator YP_008566178.1 3276721 R 1335916 CDS YP_008566179.1 544391511 16980785 3277814..3278977 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; aldehyde oxidoreductase 3278977 16980785 LY180_15575 Escherichia coli LY180 aldehyde oxidoreductase YP_008566179.1 3277814 D 1335916 CDS YP_008566180.1 544391512 16980786 3279082..3279909 1 NC_022364.1 methylglyoxal reductase/beta-keto ester reductase; catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid; also catalyzes the reduction of methylglyoxal, ethyl-2-methylacetoacetate and ethyl-acetoacetate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2,5-diketo-D-gluconic acid reductase 3279909 dkgA 16980786 dkgA Escherichia coli LY180 2,5-diketo-D-gluconic acid reductase YP_008566180.1 3279082 D 1335916 CDS YP_008566181.1 544391513 16980787 3280109..3281035 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3281035 16980787 LY180_15585 Escherichia coli LY180 hypothetical protein YP_008566181.1 3280109 D 1335916 CDS YP_008566182.1 544391514 16980788 3281086..3281343 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3281343 16980788 LY180_15590 Escherichia coli LY180 membrane protein YP_008566182.1 3281086 D 1335916 CDS YP_008566183.1 544391515 16980789 complement(3281386..3283605) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3283605 16980789 LY180_15595 Escherichia coli LY180 hypothetical protein YP_008566183.1 3281386 R 1335916 CDS YP_008566184.1 544391516 16980790 complement(3283716..3285128) 1 NC_022364.1 septal ring component that protects the divisome from stress; Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division protein FtsI 3285128 16980790 LY180_15600 Escherichia coli LY180 cell division protein FtsI YP_008566184.1 3283716 R 1335916 CDS YP_008566185.1 544391517 16980791 complement(3285203..3285940) 1 NC_022364.1 catalyzes the formation of 1,2-diacyl-sn-glycerol 3-phosphate from 1-acyl-sn-glycerol 3-phosphate using either acyl-CoA or acyl-ACP; Derived by automated computational analysis using gene prediction method: Protein Homology.; 1-acyl-sn-glycerol-3-phosphate acyltransferase 3285940 16980791 LY180_15605 Escherichia coli LY180 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_008566185.1 3285203 R 1335916 CDS YP_008566186.1 544391518 16980792 complement(3286173..3288431) 1 NC_022364.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA topoisomerase IV subunit A 3288431 16980792 LY180_15610 Escherichia coli LY180 DNA topoisomerase IV subunit A YP_008566186.1 3286173 R 1335916 CDS YP_008566187.1 544393147 16980793 complement(3288759..3288977) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; RNA-directed DNA polymerase 3288977 16980793 LY180_15615 Escherichia coli LY180 RNA-directed DNA polymerase YP_008566187.1 3288759 R 1335916 CDS YP_008566188.1 544391519 16980794 complement(3288977..3289459) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; AraC family transcriptional regulator 3289459 16980794 LY180_15620 Escherichia coli LY180 AraC family transcriptional regulator YP_008566188.1 3288977 R 1335916 CDS YP_008566189.1 544391520 16980795 complement(3289512..3289904) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3289904 16980795 LY180_15625 Escherichia coli LY180 hypothetical protein YP_008566189.1 3289512 R 1335916 CDS YP_008566190.1 544391521 16980796 3290056..3290715 1 NC_022364.1 response regulator in two-component regulatory system with QseC; regulates FlhCD which is the master regulator for flagella and motility genes; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 3290715 16980796 LY180_15630 Escherichia coli LY180 transcriptional regulator YP_008566190.1 3290056 D 1335916 CDS YP_008566191.1 544391522 16980797 3290712..3292061 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sensor protein QseC 3292061 16980797 LY180_15635 Escherichia coli LY180 sensor protein QseC YP_008566191.1 3290712 D 1335916 CDS YP_008566192.1 544391523 16980798 complement(3292107..3292439) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3292439 16980798 LY180_15640 Escherichia coli LY180 membrane protein YP_008566192.1 3292107 R 1335916 CDS YP_008566193.1 544391524 16980799 3292758..3293339 1 NC_022364.1 involved in drug resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.; NADPH quinone reductase MdaB 3293339 16980799 LY180_15645 Escherichia coli LY180 NADPH quinone reductase MdaB YP_008566193.1 3292758 D 1335916 CDS YP_008566194.1 544391525 16980800 3293370..3293684 1 NC_022364.1 catalyzes the oxidation of menadiol to menadione; Derived by automated computational analysis using gene prediction method: Protein Homology.; quinol monooxygenase 3293684 16980800 LY180_15650 Escherichia coli LY180 quinol monooxygenase YP_008566194.1 3293370 D 1335916 CDS YP_008566195.1 544391526 16980801 complement(3293732..3295624) 1 NC_022364.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA topoisomerase IV subunit B 3295624 16980801 LY180_15655 Escherichia coli LY180 DNA topoisomerase IV subunit B YP_008566195.1 3293732 R 1335916 CDS YP_008566196.1 544391527 16980802 complement(3295653..3296234) 1 NC_022364.1 Displays esterase activity toward palmitoyl-CoA and pNP-butyrate; Derived by automated computational analysis using gene prediction method: Protein Homology.; esterase 3296234 16980802 LY180_15660 Escherichia coli LY180 esterase YP_008566196.1 3295653 R 1335916 CDS YP_008566197.1 544391528 16980803 complement(3296234..3297061) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 3',5'-cyclic-nucleotide phosphodiesterase 3297061 16980803 LY180_15665 Escherichia coli LY180 3',5'-cyclic-nucleotide phosphodiesterase YP_008566197.1 3296234 R 1335916 CDS YP_008566198.1 544391529 16980804 complement(3297086..3297508) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; dehydrogenase 3297508 16980804 LY180_15670 Escherichia coli LY180 dehydrogenase YP_008566198.1 3297086 R 1335916 CDS YP_008566199.1 544391530 16980805 complement(3297509..3298138) 1 NC_022364.1 ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose; Derived by automated computational analysis using gene prediction method: Protein Homology.; ADP-ribose pyrophosphatase 3298138 nudF 16980805 nudF Escherichia coli LY180 ADP-ribose pyrophosphatase YP_008566199.1 3297509 R 1335916 CDS YP_008566200.1 544391531 16980806 3298343..3299824 1 NC_022364.1 trimeric outer membrane protein involved in efflux of hydrophobic/amphipathic molecules; functions with a number of efflux systems in the inner membrane to transport molecules out of the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; outer membrane channel protein 3299824 tolC 16980806 tolC Escherichia coli LY180 outer membrane channel protein YP_008566200.1 3298343 D 1335916 CDS YP_008566201.1 544391532 16980807 3299972..3300643 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3300643 16980807 LY180_15685 Escherichia coli LY180 membrane protein YP_008566201.1 3299972 D 1335916 CDS YP_008566202.1 544391533 16980808 3300649..3301809 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3301809 16980808 LY180_15690 Escherichia coli LY180 hypothetical protein YP_008566202.1 3300649 D 1335916 CDS YP_008566203.1 544391534 16980809 complement(3301847..3302635) 1 NC_022364.1 seems to be involved in biofilm formation; in asymptomatic bacteriuria E. coli strains 83972 and VR50, the ygiD gene is upregulated during biofilm formation in urine; Derived by automated computational analysis using gene prediction method: Protein Homology.; LigB family dioxygenase 3302635 16980809 LY180_15695 Escherichia coli LY180 LigB family dioxygenase YP_008566203.1 3301847 R 1335916 CDS YP_008566204.1 544391535 16980810 3302778..3303551 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; zinc transporter ZupT 3303551 16980810 LY180_15700 Escherichia coli LY180 zinc transporter ZupT YP_008566204.1 3302778 D 1335916 CDS YP_008566205.1 544391536 16980811 complement(3303609..3303779) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3303779 16980811 LY180_15705 Escherichia coli LY180 hypothetical protein YP_008566205.1 3303609 R 1335916 CDS YP_008566206.1 544391537 16980812 complement(3304041..3304694) 1 NC_022364.1 DHBP synthase; functions during riboflavin biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3,4-dihydroxy-2-butanone 4-phosphate synthase 3304694 ribB 16980812 ribB Escherichia coli LY180 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_008566206.1 3304041 R 1335916 CDS YP_008566207.1 544391538 16980813 3305068..3305358 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3305358 16980813 LY180_15715 Escherichia coli LY180 hypothetical protein YP_008566207.1 3305068 D 1335916 CDS YP_008566208.1 544391539 16980814 3305641..3306192 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein 3306192 16980814 LY180_15720 Escherichia coli LY180 fimbrial protein YP_008566208.1 3305641 D 1335916 CDS YP_008566209.1 544393148 16980815 3306252..3308756 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; fimbrial outer membrane usher protein StdB 3308756 16980815 LY180_15725 Escherichia coli LY180 fimbrial outer membrane usher protein StdB YP_008566209.1 3306252 D 1335916 CDS YP_008566210.1 544391540 16980816 3308826..3309521 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein 3309521 16980816 LY180_15730 Escherichia coli LY180 fimbrial protein YP_008566210.1 3308826 D 1335916 CDS YP_008566211.1 544391541 16980817 3309523..3310587 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3310587 16980817 LY180_15735 Escherichia coli LY180 hypothetical protein YP_008566211.1 3309523 D 1335916 CDS YP_008566212.1 544391542 16980818 complement(3310630..3310830) 1 NC_022364.1 Involved in glycogen synthesis. May be involved in glycogen priming; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycogen synthesis protein GlgS 3310830 16980818 LY180_15740 Escherichia coli LY180 glycogen synthesis protein GlgS YP_008566212.1 3310630 R 1335916 CDS YP_008566213.1 544391543 16980819 3311099..3311728 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3311728 16980819 LY180_15745 Escherichia coli LY180 membrane protein YP_008566213.1 3311099 D 1335916 CDS YP_008566214.1 544391544 16980820 3311755..3313416 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3313416 16980820 LY180_15750 Escherichia coli LY180 membrane protein YP_008566214.1 3311755 D 1335916 CDS YP_008566215.1 544391545 16980821 complement(3314210..3315643) 1 NC_022364.1 catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D,D-heptose-1,7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D,D-heptose; Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase 3315643 16980821 LY180_15755 Escherichia coli LY180 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase YP_008566215.1 3314210 R 1335916 CDS YP_008566216.1 544391546 16980822 complement(3315691..3318531) 1 NC_022364.1 catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 3318531 16980822 LY180_15760 Escherichia coli LY180 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase YP_008566216.1 3315691 R 1335916 CDS YP_008566217.1 544391547 16980823 complement(3318554..3319855) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3319855 16980823 LY180_15765 Escherichia coli LY180 hypothetical protein YP_008566217.1 3318554 R 1335916 CDS YP_008566218.1 544391548 16980824 3320097..3320717 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3320717 16980824 LY180_15770 Escherichia coli LY180 hypothetical protein YP_008566218.1 3320097 D 1335916 CDS YP_008566219.1 544391549 16980825 3320781..3322019 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA nucleotidyl transferase 3322019 16980825 LY180_15775 Escherichia coli LY180 tRNA nucleotidyl transferase YP_008566219.1 3320781 D 1335916 CDS YP_008566220.1 544391550 16980826 complement(3322182..3323003) 1 NC_022364.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP pyrophosphate phosphatase 3323003 16980826 LY180_15780 Escherichia coli LY180 UDP pyrophosphate phosphatase YP_008566220.1 3322182 R 1335916 CDS YP_008566221.1 544391551 16980827 complement(3323093..3323461) 1 NC_022364.1 catalyzes the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin and can also catalyze the epimerization of carbon 2' of dihydroneopterin and dihydromonapterin; Derived by automated computational analysis using gene prediction method: Protein Homology.; dihydroneopterin triphosphate 2'-epimerase 3323461 folB 16980827 folB Escherichia coli LY180 dihydroneopterin triphosphate 2'-epimerase YP_008566221.1 3323093 R 1335916 CDS YP_008566222.1 544391552 16980828 3323566..3324183 1 NC_022364.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycerol-3-phosphate acyltransferase 3324183 16980828 LY180_15790 Escherichia coli LY180 glycerol-3-phosphate acyltransferase YP_008566222.1 3323566 D 1335916 CDS YP_008566223.1 544391553 16980829 complement(3324196..3325128) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LysR family transcriptional regulator 3325128 16980829 LY180_15795 Escherichia coli LY180 LysR family transcriptional regulator YP_008566223.1 3324196 R 1335916 CDS YP_008566224.1 544391554 16980830 3325335..3326246 1 NC_022364.1 Involved in the tartrate degradation pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.; tartrate dehydratase subunit alpha 3326246 16980830 LY180_15800 Escherichia coli LY180 tartrate dehydratase subunit alpha YP_008566224.1 3325335 D 1335916 CDS YP_008566225.1 544391555 16980831 3326243..3326848 1 NC_022364.1 Involved in the tartrate degradation pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.; L(+)-tartrate dehydratase subunit beta 3326848 16980831 LY180_15805 Escherichia coli LY180 L(+)-tartrate dehydratase subunit beta YP_008566225.1 3326243 D 1335916 CDS YP_008566226.1 544391556 16980832 3326897..3328360 1 NC_022364.1 involved in the transport of L-tartrate into the cell with the export of succinate out of the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; antiporter 3328360 16980832 LY180_15810 Escherichia coli LY180 antiporter YP_008566226.1 3326897 D 1335916 CDS YP_008566227.1 544391557 16980833 complement(3328403..3329416) 1 NC_022364.1 universal genome maintenance protein; Kae1/Qri7/OSGEP/YgjD family protein; in Archaea, some Kae1 are found as fusion proteins similar to two distinct proteins in yeast that are involved in the KEOPS complex; kinase associated endopeptidase 1 (Kae1) and a serine/threonine protein kinase (Bud32); in Pyrococcus Kae1 has atypical AP endonuclease activity and inhibits the kinase activity of Bud32; the protein is essential in Escherichia coli and Bacillus subtilis; Derived by automated computational analysis using gene prediction method: Protein Homology.; UGMP family protein 3329416 16980833 LY180_15815 Escherichia coli LY180 UGMP family protein YP_008566227.1 3328403 R 1335916 CDS YP_008566228.1 544391558 16980834 3329653..3329868 1 NC_022364.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S21 3329868 rpsU 16980834 rpsU Escherichia coli LY180 30S ribosomal protein S21 YP_008566228.1 3329653 D 1335916 CDS YP_008566229.1 544391559 16980835 3329979..3331724 1 NC_022364.1 synthesizes RNA primers at the replication forks; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA primase 3331724 dnaG 16980835 dnaG Escherichia coli LY180 DNA primase YP_008566229.1 3329979 D 1335916 CDS YP_008566230.1 544391560 16980836 3331919..3333760 1 NC_022364.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; Derived by automated computational analysis using gene prediction method: Protein Homology.; RNA polymerase sigma factor RpoD 3333760 16980836 LY180_15830 Escherichia coli LY180 RNA polymerase sigma factor RpoD YP_008566230.1 3331919 D 1335916 CDS YP_008566231.1 544391561 16980837 complement(3333838..3334344) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA glycosylase 3334344 16980837 LY180_15835 Escherichia coli LY180 DNA glycosylase YP_008566231.1 3333838 R 1335916 CDS YP_008566232.1 544391562 16980839 complement(3334598..3335362) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; FMN reductase 3335362 16980839 LY180_15845 Escherichia coli LY180 FMN reductase YP_008566232.1 3334598 R 1335916 CDS YP_008566233.1 544391563 16980840 3335639..3336262 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 3336262 16980840 LY180_15850 Escherichia coli LY180 transcriptional regulator YP_008566233.1 3335639 D 1335916 CDS YP_008566234.1 544391564 16980841 complement(3336416..3337936) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; aerotaxis receptor 3337936 16980841 LY180_15855 Escherichia coli LY180 aerotaxis receptor YP_008566234.1 3336416 R 1335916 CDS YP_008566235.1 544391565 16980842 3338243..3339733 1 NC_022364.1 catalyzes the formation of 4-aminobutyraldehyde from putrescine and 2-oxoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.; putrescine--2-oxoglutarate aminotransferase 3339733 16980842 LY180_15860 Escherichia coli LY180 putrescine--2-oxoglutarate aminotransferase YP_008566235.1 3338243 D 1335916 CDS YP_008566236.1 544391566 16980843 complement(3339775..3340107) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; methionyl-tRNA synthetase 3340107 16980843 LY180_15865 Escherichia coli LY180 methionyl-tRNA synthetase YP_008566236.1 3339775 R 1335916 CDS YP_008566237.1 544391567 16980844 3340326..3341309 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LacI family transcriptional regulator 3341309 16980844 LY180_15870 Escherichia coli LY180 LacI family transcriptional regulator YP_008566237.1 3340326 D 1335916 CDS YP_008566238.1 544391568 16980845 3341493..3344585 1 NC_022364.1 in Escherichia coli this is the second beta-galactosidase system; Derived by automated computational analysis using gene prediction method: Protein Homology.; beta-D-galactosidase subunit alpha 3344585 ebgA 16980845 ebgA Escherichia coli LY180 beta-D-galactosidase subunit alpha YP_008566238.1 3341493 D 1335916 CDS YP_008566239.1 544393149 16980846 3344582..3344911 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3344911 16980846 LY180_15880 Escherichia coli LY180 hypothetical protein YP_008566239.1 3344582 D 1335916 CDS YP_008566240.1 544391569 16980847 3346033..3346368 1 NC_022364.1 in Escherichia coli this is the second beta-galactosidase system; Derived by automated computational analysis using gene prediction method: Protein Homology.; beta-D-galactosidase subunit beta 3346368 ebgC 16980847 ebgC Escherichia coli LY180 beta-D-galactosidase subunit beta YP_008566240.1 3346033 D 1335916 CDS YP_008566241.1 544391570 16980848 3346431..3347864 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; amino acid permease 3347864 16980848 LY180_15890 Escherichia coli LY180 amino acid permease YP_008566241.1 3346431 D 1335916 CDS YP_008566242.1 544393150 16980849 3347998..3349068 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3349068 16980849 LY180_15895 Escherichia coli LY180 hypothetical protein YP_008566242.1 3347998 D 1335916 CDS YP_008566243.1 544391571 16980850 3349085..3351436 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; alpha-glucosidase 3351436 16980850 LY180_15900 Escherichia coli LY180 alpha-glucosidase YP_008566243.1 3349085 D 1335916 CDS YP_008566244.1 544391572 16980851 3351762..3353780 1 NC_022364.1 catalyzes the formation of trans-2- enoyl-CoA from 2,4-dienoyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2,4-dienoyl-CoA reductase 3353780 fadH 16980851 fadH Escherichia coli LY180 2,4-dienoyl-CoA reductase YP_008566244.1 3351762 D 1335916 CDS YP_008566245.1 544391573 16980852 complement(3353825..3354241) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; XRE family transcriptional regulator 3354241 16980852 LY180_15910 Escherichia coli LY180 XRE family transcriptional regulator YP_008566245.1 3353825 R 1335916 CDS YP_008566246.1 544391574 16980853 complement(3354512..3355648) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 23S rRNA methyltransferase 3355648 16980853 LY180_15915 Escherichia coli LY180 23S rRNA methyltransferase YP_008566246.1 3354512 R 1335916 CDS YP_008566247.1 544391575 16980854 3355733..3356236 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3356236 16980854 LY180_15920 Escherichia coli LY180 hypothetical protein YP_008566247.1 3355733 D 1335916 CDS YP_008566248.1 544391576 16980855 3356313..3356996 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3356996 16980855 LY180_15925 Escherichia coli LY180 hypothetical protein YP_008566248.1 3356313 D 1335916 CDS YP_008566249.1 544391577 16980856 3357057..3358061 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase 3358061 16980856 LY180_15930 Escherichia coli LY180 oxidoreductase YP_008566249.1 3357057 D 1335916 CDS YP_008566250.1 544391578 16980857 3358344..3359309 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3359309 16980857 LY180_15935 Escherichia coli LY180 membrane protein YP_008566250.1 3358344 D 1335916 CDS YP_008566251.1 544391579 16980858 3359708..3360952 1 NC_022364.1 involved in the import of serine and threonine coupled with the import of sodium; Derived by automated computational analysis using gene prediction method: Protein Homology.; serine/threonine transporter 3360952 16980858 LY180_15940 Escherichia coli LY180 serine/threonine transporter YP_008566251.1 3359708 D 1335916 CDS YP_008566252.1 544391580 16980859 complement(3360957..3361508) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3361508 16980859 LY180_15945 Escherichia coli LY180 membrane protein YP_008566252.1 3360957 R 1335916 CDS YP_008566253.1 544391581 16980860 complement(3361591..3363078) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; altronate hydrolase 3363078 16980860 LY180_15950 Escherichia coli LY180 altronate hydrolase YP_008566253.1 3361591 R 1335916 CDS YP_008566254.1 544391582 16980861 complement(3363093..3364505) 1 NC_022364.1 catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.; glucuronate isomerase 3364505 16980861 LY180_15955 Escherichia coli LY180 glucuronate isomerase YP_008566254.1 3363093 R 1335916 CDS YP_008566255.1 544391583 16980862 3364868..3366286 1 NC_022364.1 involved in the transport of aldohexuronates; Derived by automated computational analysis using gene prediction method: Protein Homology.; hexuronate transporter ExuT 3366286 16980862 LY180_15960 Escherichia coli LY180 hexuronate transporter ExuT YP_008566255.1 3364868 D 1335916 CDS YP_008566256.1 544393151 16980863 complement(3366374..3367006) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; minor pilin and initiator 3367006 16980863 LY180_15965 Escherichia coli LY180 minor pilin and initiator YP_008566256.1 3366374 R 1335916 CDS YP_008566257.1 544393152 16980864 complement(3367459..3370143) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3370143 16980864 LY180_15970 Escherichia coli LY180 hypothetical protein YP_008566257.1 3367459 R 1335916 CDS YP_008566258.1 544393153 16980865 complement(3370235..3370735) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; fimbrial protein 3370735 16980865 LY180_15975 Escherichia coli LY180 fimbrial protein YP_008566258.1 3370235 R 1335916 CDS YP_008566259.1 544393154 16980866 complement(3370765..3371481) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; fimbrial protein 3371481 16980866 LY180_15980 Escherichia coli LY180 fimbrial protein YP_008566259.1 3370765 R 1335916 CDS YP_008566260.1 544391584 16980867 3371777..3372553 1 NC_022364.1 regulates the exuT, uxaCA and uxuRAB operons which encode genes involved in hexuronate utilization; Derived by automated computational analysis using gene prediction method: Protein Homology.; GntR family transcriptional regulator 3372553 16980867 LY180_15985 Escherichia coli LY180 GntR family transcriptional regulator YP_008566260.1 3371777 D 1335916 CDS YP_008566261.1 544391585 16980868 3372898..3373560 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3373560 16980868 LY180_15990 Escherichia coli LY180 membrane protein YP_008566261.1 3372898 D 1335916 CDS YP_008566262.1 544391586 16980869 3373564..3373947 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3373947 16980869 LY180_15995 Escherichia coli LY180 membrane protein YP_008566262.1 3373564 D 1335916 CDS YP_008566263.1 544391587 16980870 3374094..3374462 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3374462 16980870 LY180_16000 Escherichia coli LY180 hypothetical protein YP_008566263.1 3374094 D 1335916 CDS YP_008566264.1 544391588 16980871 3374500..3374805 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3374805 16980871 LY180_16005 Escherichia coli LY180 membrane protein YP_008566264.1 3374500 D 1335916 CDS YP_008566265.1 544391589 16980872 3374808..3375212 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3375212 16980872 LY180_16010 Escherichia coli LY180 membrane protein YP_008566265.1 3374808 D 1335916 CDS YP_008566266.1 544391590 16980873 3375202..3375501 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3375501 16980873 LY180_16015 Escherichia coli LY180 membrane protein YP_008566266.1 3375202 D 1335916 CDS YP_008566267.1 544391591 16980874 3375687..3376079 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3376079 16980874 LY180_16020 Escherichia coli LY180 membrane protein YP_008566267.1 3375687 D 1335916 CDS YP_008566268.1 544393155 16980875 3376149..3376274 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3376274 16980875 LY180_16025 Escherichia coli LY180 hypothetical protein YP_008566268.1 3376149 D 1335916 CDS YP_008566269.1 544391592 16980876 3377701..3378474 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3378474 16980876 LY180_16030 Escherichia coli LY180 hypothetical protein YP_008566269.1 3377701 D 1335916 CDS YP_008566270.1 544391593 16980877 complement(3378559..3378642) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3378642 16980877 LY180_16035 Escherichia coli LY180 hypothetical protein YP_008566270.1 3378559 R 1335916 CDS YP_008566271.1 544391594 16980878 3378767..3379132 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3379132 16980878 LY180_16040 Escherichia coli LY180 membrane protein YP_008566271.1 3378767 D 1335916 CDS YP_008566272.1 544391595 16980879 3379374..3379730 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3379730 16980879 LY180_16045 Escherichia coli LY180 membrane protein YP_008566272.1 3379374 D 1335916 CDS YP_008566273.1 544391596 16980880 complement(3379781..3380677) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LysR family transcripitonal regulator 3380677 16980880 LY180_16050 Escherichia coli LY180 LysR family transcripitonal regulator YP_008566273.1 3379781 R 1335916 CDS YP_008566274.1 544391597 16980881 3380782..3381483 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; pirin 3381483 16980881 LY180_16055 Escherichia coli LY180 pirin YP_008566274.1 3380782 D 1335916 CDS YP_008566275.1 544391598 16980882 3381506..3381670 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3381670 16980882 LY180_16060 Escherichia coli LY180 hypothetical protein YP_008566275.1 3381506 D 1335916 CDS YP_008566276.1 544391599 16980883 complement(3381882..3383192) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3383192 16980883 LY180_16065 Escherichia coli LY180 membrane protein YP_008566276.1 3381882 R 1335916 CDS YP_008566277.1 544391600 16980884 complement(3383220..3384551) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3384551 16980884 LY180_16070 Escherichia coli LY180 membrane protein YP_008566277.1 3383220 R 1335916 CDS YP_008566278.1 544391601 16980885 complement(3384826..3386190) 1 NC_022364.1 catalyzes the formation of pyruvate from serine; Derived by automated computational analysis using gene prediction method: Protein Homology.; L-serine dehydratase 3386190 16980885 LY180_16075 Escherichia coli LY180 L-serine dehydratase YP_008566278.1 3384826 R 1335916 CDS YP_008566279.1 544391602 16980886 complement(3386262..3386651) 1 NC_022364.1 has endoribonuclease activity on mRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; endoribonuclease L-PSP 3386651 16980886 LY180_16080 Escherichia coli LY180 endoribonuclease L-PSP YP_008566279.1 3386262 R 1335916 CDS YP_008566280.1 544391603 16980887 complement(3386665..3388959) 1 NC_022364.1 formate acetyltransferase; catalyzes the formation of formate and acetyl-CoA from pyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology.; keto-acid formate acetyltransferase 3388959 16980887 LY180_16085 Escherichia coli LY180 keto-acid formate acetyltransferase YP_008566280.1 3386665 R 1335916 CDS YP_008566281.1 544391604 16980888 complement(3388993..3390201) 1 NC_022364.1 catalyzes the formation of propanoyl phosphate from propanoate and ATP; TdcD also has acetate kinase activities and functions in anaerobic threonine catabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.; propionate/acetate kinase 3390201 16980888 LY180_16090 Escherichia coli LY180 propionate/acetate kinase YP_008566281.1 3388993 R 1335916 CDS YP_008566282.1 544391605 16980889 complement(3390227..3391558) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; serine/threonine transporter 3391558 16980889 LY180_16095 Escherichia coli LY180 serine/threonine transporter YP_008566282.1 3390227 R 1335916 CDS YP_008566283.1 544391606 16980890 complement(3391580..3392569) 1 NC_022364.1 catalyzes the formation of 2-oxobutanoate from L-threonine; catabolic; Derived by automated computational analysis using gene prediction method: Protein Homology.; threonine dehydratase 3392569 16980890 LY180_16100 Escherichia coli LY180 threonine dehydratase YP_008566283.1 3391580 R 1335916 CDS YP_008566284.1 544391607 16980891 complement(3392668..3393606) 1 NC_022364.1 regulates the tdcABCDEFG operon which is involved in amino acid degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 3393606 16980891 LY180_16105 Escherichia coli LY180 transcriptional regulator YP_008566284.1 3392668 R 1335916 CDS YP_008566285.1 544391608 16980892 3394395..3394934 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3394934 16980892 LY180_16110 Escherichia coli LY180 hypothetical protein YP_008566285.1 3394395 D 1335916 CDS YP_008566286.1 544391609 16980893 3394956..3396143 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3396143 16980893 LY180_16115 Escherichia coli LY180 hypothetical protein YP_008566286.1 3394956 D 1335916 CDS YP_008566287.1 544391610 16980894 3396246..3396368 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3396368 16980894 LY180_16120 Escherichia coli LY180 hypothetical protein YP_008566287.1 3396246 D 1335916 CDS YP_008566288.1 544393156 16980895 complement(3396470..3396586) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3396586 16980895 LY180_16125 Escherichia coli LY180 hypothetical protein YP_008566288.1 3396470 R 1335916 CDS YP_008566289.1 544393157 16980896 complement(3396583..3396699) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3396699 16980896 LY180_16130 Escherichia coli LY180 hypothetical protein YP_008566289.1 3396583 R 1335916 CDS YP_008566290.1 544391611 16980897 complement(3397166..3398311) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glycerate kinase 3398311 16980897 LY180_16135 Escherichia coli LY180 glycerate kinase YP_008566290.1 3397166 R 1335916 CDS YP_008566291.1 544391612 16980898 complement(3398408..3399307) 1 NC_022364.1 catalyzes the reduction of tartronate semialdehyde to glycerate; Derived by automated computational analysis using gene prediction method: Protein Homology.; tartronate semialdehyde reductase 3399307 garR 16980898 garR Escherichia coli LY180 tartronate semialdehyde reductase YP_008566291.1 3398408 R 1335916 CDS YP_008566292.1 544391613 16980899 complement(3399328..3400098) 1 NC_022364.1 cleaves 5-dehydro-4-deoxy-glucarate and 2-dehydro-3-deoxy-D-glucarate; Derived by automated computational analysis using gene prediction method: Protein Homology.; alpha-dehydro-beta-deoxy-D-glucarate aldolase 3400098 16980899 LY180_16145 Escherichia coli LY180 alpha-dehydro-beta-deoxy-D-glucarate aldolase YP_008566292.1 3399328 R 1335916 CDS YP_008566293.1 544391614 16980900 complement(3400114..3401448) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; galactonate transporter 3401448 16980900 LY180_16150 Escherichia coli LY180 galactonate transporter YP_008566293.1 3400114 R 1335916 CDS YP_008566294.1 544393158 16980901 3401469..3401594 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 3401594 16980901 LY180_16155 Escherichia coli LY180 membrane protein YP_008566294.1 3401469 D 1335916 CDS YP_008566295.1 544391615 16980902 3401823..3403394 1 NC_022364.1 catalyzes the formation of 5-dehydro-4-deoxy-D-glucarate from D-galactarate; Derived by automated computational analysis using gene prediction method: Protein Homology.; galactarate dehydrogenase 3403394 garD 16980902 garD Escherichia coli LY180 galactarate dehydrogenase YP_008566295.1 3401823 D 1335916 CDS YP_008566296.1 544391616 16980903 3403878..3404342 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; toxin YhaV 3404342 16980903 LY180_16165 Escherichia coli LY180 toxin YhaV YP_008566296.1 3403878 D 1335916 CDS YP_008566297.1 544391617 16980904 complement(3404397..3405206) 1 NC_022364.1 transcriptional repressor for the agaZVWA and agaSYBCDI operons; Derived by automated computational analysis using gene prediction method: Protein Homology.; DeoR family transcriptional regulator 3405206 16980904 LY180_16170 Escherichia coli LY180 DeoR family transcriptional regulator YP_008566297.1 3404397 R 1335916 CDS YP_008566298.1 544391618 16980905 3405455..3406735 1 NC_022364.1 with KbaY catalyzes the formation of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate from tagatose-1,6-bisphosphate; subunit Z may act as a chaperone for the Y subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.; tagatose-bisphosphate aldolase 3406735 16980905 LY180_16175 Escherichia coli LY180 tagatose-bisphosphate aldolase YP_008566298.1 3405455 D 1335916 CDS YP_008566299.1 544391619 16980906 3406758..3407231 1 NC_022364.1 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake; involved in N-acetylgalactosamine transport; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS N-acetylgalactosamine transporter subunit IIB 3407231 16980906 LY180_16180 Escherichia coli LY180 PTS N-acetylgalactosamine transporter subunit IIB YP_008566299.1 3406758 D 1335916 CDS YP_008566300.1 544391620 16980907 3407242..3408021 1 NC_022364.1 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake;involved in N-acetylgalactosamine transport; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS N-acetylgalactosamine transporter subunit IIC 3408021 16980907 LY180_16185 Escherichia coli LY180 PTS N-acetylgalactosamine transporter subunit IIC YP_008566300.1 3407242 D 1335916 CDS YP_008566301.1 544391621 16980908 3408011..3408889 1 NC_022364.1 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IID with IIC forms the translocation channel; involved in N-acetylgalactosamine transport; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS N-acetylgalactosamine transporter subunit IID 3408889 16980908 LY180_16190 Escherichia coli LY180 PTS N-acetylgalactosamine transporter subunit IID YP_008566301.1 3408011 D 1335916 CDS YP_008566302.1 544391622 16980909 3408907..3409341 1 NC_022364.1 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IID with IIC forms the translocation channel; involved in N-acetylgalactosamine transport; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS N-acetylgalactosamine transporter subunit IIA 3409341 16980909 LY180_16195 Escherichia coli LY180 PTS N-acetylgalactosamine transporter subunit IIA YP_008566302.1 3408907 D 1335916 CDS YP_008566303.1 544393159 16980910 3409338..3410471 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; N-acetylglucosamine-6-phosphate deacetylase 3410471 16980910 LY180_16200 Escherichia coli LY180 N-acetylglucosamine-6-phosphate deacetylase YP_008566303.1 3409338 D 1335916 CDS YP_008566304.1 544391623 16980911 3410821..3411975 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; aldose isomerase 3411975 16980911 LY180_16205 Escherichia coli LY180 aldose isomerase YP_008566304.1 3410821 D 1335916 CDS YP_008566305.1 544391624 16980912 3411988..3412848 1 NC_022364.1 catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1,6-bisphosphate; in enteric bacteria there are two D-tagatose 1,6-bisphosphate-specific aldolases: KbaY (also called AgaY), involved in catabolism of N-acetyl-galactosamine and D-galactosamine, and GatY which is part of the galactitol catabolism pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.; tagatose-bisphosphate aldolase 3412848 kbaY 16980912 kbaY Escherichia coli LY180 tagatose-bisphosphate aldolase YP_008566305.1 3411988 D 1335916 CDS YP_008566306.1 544391625 16980913 3413015..3413491 1 NC_022364.1 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake; involved in N-acetylgalactosamine transport; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS N-acetylgalactosamine transporter subunit IIB 3413491 16980913 LY180_16215 Escherichia coli LY180 PTS N-acetylgalactosamine transporter subunit IIB YP_008566306.1 3413015 D 1335916 CDS YP_008566307.1 544391626 16980914 3413530..3414333 1 NC_022364.1 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane;protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake; involved in N-acetylgalactosamine transport; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS N-acetylgalactosamine transporter subunit IIC 3414333 16980914 LY180_16220 Escherichia coli LY180 PTS N-acetylgalactosamine transporter subunit IIC YP_008566307.1 3413530 D 1335916 CDS YP_008566308.1 544391627 16980915 3414323..3415114 1 NC_022364.1 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IID with IIC forms the translocation channel; involved in N-acetylgalactosamine transport; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS N-acetylgalactosamine transporter subunit IID 3415114 16980915 LY180_16225 Escherichia coli LY180 PTS N-acetylgalactosamine transporter subunit IID YP_008566308.1 3414323 D 1335916 CDS YP_008566309.1 544391628 16980916 3415115..3415870 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; galactosamine-6-phosphate isomerase 3415870 16980916 LY180_16230 Escherichia coli LY180 galactosamine-6-phosphate isomerase YP_008566309.1 3415115 D 1335916 CDS YP_008566310.1 544391629 16980917 3416270..3416854 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein 3416854 16980917 LY180_16235 Escherichia coli LY180 fimbrial protein YP_008566310.1 3416270 D 1335916 CDS YP_008566311.1 544391630 16980918 3416934..3417629 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein 3417629 16980918 LY180_16240 Escherichia coli LY180 fimbrial protein YP_008566311.1 3416934 D 1335916 CDS YP_008566312.1 544391631 16980919 3417659..3420175 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3420175 16980919 LY180_16245 Escherichia coli LY180 membrane protein YP_008566312.1 3417659 D 1335916 CDS YP_008566313.1 544391632 16980920 3420186..3421277 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein 3421277 16980920 LY180_16250 Escherichia coli LY180 fimbrial protein YP_008566313.1 3420186 D 1335916 CDS YP_008566314.1 544391633 16980921 complement(3421320..3422180) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 16S rRNA methyltransferase 3422180 16980921 LY180_16255 Escherichia coli LY180 16S rRNA methyltransferase YP_008566314.1 3421320 R 1335916 CDS YP_008566315.1 544391634 16980922 3422244..3424280 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; penicillin-binding protein activator LpoA 3424280 16980922 LY180_16260 Escherichia coli LY180 penicillin-binding protein activator LpoA YP_008566315.1 3422244 D 1335916 CDS YP_008566316.1 544391635 16980923 3424238..3424633 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3424633 16980923 LY180_16265 Escherichia coli LY180 hypothetical protein YP_008566316.1 3424238 D 1335916 CDS YP_008566317.1 544391636 16980924 3424653..3425243 1 NC_022364.1 Required for the timely initiation of chromosomal replication via direct interactions with the dnaA initiator protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; DnaA initiator-associating protein DiaA 3425243 16980924 LY180_16270 Escherichia coli LY180 DnaA initiator-associating protein DiaA YP_008566317.1 3424653 D 1335916 CDS YP_008566318.1 544391637 16980925 3425253..3425828 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; outer membrane lipoprotein 3425828 16980925 LY180_16275 Escherichia coli LY180 outer membrane lipoprotein YP_008566318.1 3425253 D 1335916 CDS YP_008566319.1 544391638 16980926 complement(3425942..3426982) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3426982 16980926 LY180_16280 Escherichia coli LY180 membrane protein YP_008566319.1 3425942 R 1335916 CDS YP_008566320.1 544391639 16980927 complement(3427055..3427690) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3427690 16980927 LY180_16285 Escherichia coli LY180 hypothetical protein YP_008566320.1 3427055 R 1335916 CDS YP_008566321.1 544391640 16980928 3427818..3428336 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; general stress protein 3428336 16980928 LY180_16290 Escherichia coli LY180 general stress protein YP_008566321.1 3427818 D 1335916 CDS YP_008566322.1 544391641 16980929 complement(3428316..3428759) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3428759 16980929 LY180_16295 Escherichia coli LY180 hypothetical protein YP_008566322.1 3428316 R 1335916 CDS YP_008566323.1 544391642 16980930 3428810..3429112 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; GIY-YIG nuclease 3429112 16980930 LY180_16300 Escherichia coli LY180 GIY-YIG nuclease YP_008566323.1 3428810 D 1335916 CDS YP_008566324.1 544391643 16980931 complement(3429099..3429602) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; N-acetyltransferase 3429602 16980931 LY180_16305 Escherichia coli LY180 N-acetyltransferase YP_008566324.1 3429099 R 1335916 CDS YP_008566325.1 544391644 16980932 complement(3429596..3430120) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3430120 16980932 LY180_16310 Escherichia coli LY180 hypothetical protein YP_008566325.1 3429596 R 1335916 CDS YP_008566326.1 544391645 16980933 3430329..3431324 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; protease 3431324 16980933 LY180_16315 Escherichia coli LY180 protease YP_008566326.1 3430329 D 1335916 CDS YP_008566327.1 544391646 16980934 3431333..3432211 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; protease 3432211 16980934 LY180_16320 Escherichia coli LY180 protease YP_008566327.1 3431333 D 1335916 CDS YP_008566328.1 544391647 16980935 3432417..3433424 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3433424 16980935 LY180_16325 Escherichia coli LY180 hypothetical protein YP_008566328.1 3432417 D 1335916 CDS YP_008566329.1 544391648 16980936 complement(3433542..3434786) 1 NC_022364.1 tryptophan transporter of high affinity; Derived by automated computational analysis using gene prediction method: Protein Homology.; tryptophan permease 3434786 16980936 LY180_16330 Escherichia coli LY180 tryptophan permease YP_008566329.1 3433542 R 1335916 CDS YP_008566330.1 544391649 16980937 complement(3434940..3436829) 1 NC_022364.1 participates in the assembly of the large subunit of the ribosome; plays a key role in optimal cell growth at low temperature and is required for normal cell division; Derived by automated computational analysis using gene prediction method: Protein Homology.; RNA helicase 3436829 16980937 LY180_16335 Escherichia coli LY180 RNA helicase YP_008566330.1 3434940 R 1335916 CDS YP_008566331.1 544391650 16980938 complement(3437009..3437893) 1 NC_022364.1 lipoprotein that appears to be involved in cell division; interacts with the periplasmic protease Prc and may be activated by protease processing; Derived by automated computational analysis using gene prediction method: Protein Homology.; lipoprotein NlpI 3437893 16980938 LY180_16340 Escherichia coli LY180 lipoprotein NlpI YP_008566331.1 3437009 R 1335916 CDS YP_008566332.1 544391651 16980939 complement(3438002..3440137) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; polynucleotide phosphorylase/polyadenylase 3440137 16980939 LY180_16345 Escherichia coli LY180 polynucleotide phosphorylase/polyadenylase YP_008566332.1 3438002 R 1335916 CDS YP_008566333.1 544391652 16980940 complement(3440384..3440653) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S15 3440653 16980940 LY180_16350 Escherichia coli LY180 30S ribosomal protein S15 YP_008566333.1 3440384 R 1335916 CDS YP_008566334.1 544391653 16980941 complement(3440802..3441746) 1 NC_022364.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA pseudouridine synthase B 3441746 truB 16980941 truB Escherichia coli LY180 tRNA pseudouridine synthase B YP_008566334.1 3440802 R 1335916 CDS YP_008566335.1 544391654 16980942 complement(3441746..3442147) 1 NC_022364.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribosome-binding factor A 3442147 rbfA 16980942 rbfA Escherichia coli LY180 ribosome-binding factor A YP_008566335.1 3441746 R 1335916 CDS YP_008566336.1 544391655 16980943 complement(3442311..3444983) 1 NC_022364.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Derived by automated computational analysis using gene prediction method: Protein Homology.; translation initiation factor IF-2 3444983 infB 16980943 infB Escherichia coli LY180 translation initiation factor IF-2 YP_008566336.1 3442311 R 1335916 CDS YP_008566337.1 544391656 16980944 complement(3445008..3446495) 1 NC_022364.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidase M54 3446495 nusA 16980944 nusA Escherichia coli LY180 peptidase M54 YP_008566337.1 3445008 R 1335916 CDS YP_008566338.1 544391657 16980945 complement(3446523..3446981) 1 NC_022364.1 required for the maturation of the 30S ribosomal subunits; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribosome maturation protein RimP 3446981 16980945 LY180_16375 Escherichia coli LY180 ribosome maturation protein RimP YP_008566338.1 3446523 R 1335916 CDS YP_008566339.1 544391658 16980947 3447606..3448949 1 NC_022364.1 catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; argininosuccinate synthase 3448949 16980947 LY180_16385 Escherichia coli LY180 argininosuccinate synthase YP_008566339.1 3447606 D 1335916 CDS YP_008566340.1 544391659 16980948 complement(3448957..3450582) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphate starvation-inducible protein PsiE 3450582 16980948 LY180_16390 Escherichia coli LY180 phosphate starvation-inducible protein PsiE YP_008566340.1 3448957 R 1335916 CDS YP_008566341.1 544391660 16980950 complement(3451142..3451474) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; preprotein translocase subunit SecG 3451474 secG 16980950 secG Escherichia coli LY180 preprotein translocase subunit SecG YP_008566341.1 3451142 R 1335916 CDS YP_008566342.1 544391661 16980951 complement(3451702..3453039) 1 NC_022364.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoglucosamine mutase 3453039 glmM 16980951 glmM Escherichia coli LY180 phosphoglucosamine mutase YP_008566342.1 3451702 R 1335916 CDS YP_008566343.1 544391662 16980952 complement(3453032..3453880) 1 NC_022364.1 catalyzes the formation of dihydropteroate from 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate and 4-aminobenzoate; Derived by automated computational analysis using gene prediction method: Protein Homology.; dihydropteroate synthase 3453880 folP 16980952 folP Escherichia coli LY180 dihydropteroate synthase YP_008566343.1 3453032 R 1335916 CDS YP_008566344.1 544391663 16980953 complement(3453970..3455904) 1 NC_022364.1 inner membrane metalloprotease; may be involved in degradation of aberrant cytoplasmic and membrane proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-dependent metalloprotease 3455904 hflB 16980953 hflB Escherichia coli LY180 ATP-dependent metalloprotease YP_008566344.1 3453970 R 1335916 CDS YP_008566345.1 544391664 16980954 complement(3456004..3456633) 1 NC_022364.1 Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.; 23S rRNA methyltransferase 3456633 rrmJ 16980954 rrmJ Escherichia coli LY180 23S rRNA methyltransferase YP_008566345.1 3456004 R 1335916 CDS YP_008566346.1 544391665 16980955 3456759..3457052 1 NC_022364.1 RNA binding protein found associated to pre-50S subunit of the ribosome; putative role in ribosome assembly; necessary for optimal growth but not cell viability; Derived by automated computational analysis using gene prediction method: Protein Homology.; RNA-binding protein YhbY 3457052 16980955 LY180_16425 Escherichia coli LY180 RNA-binding protein YhbY YP_008566346.1 3456759 D 1335916 CDS YP_008566347.1 544391666 16980956 complement(3457208..3457684) 1 NC_022364.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcription elongation factor GreA 3457684 greA 16980956 greA Escherichia coli LY180 transcription elongation factor GreA YP_008566347.1 3457208 R 1335916 CDS YP_008566348.1 544391667 16980957 3457932..3459365 1 NC_022364.1 penicillin binding protein 4; penicillin sensitive; catalyzes the formation of D-alanine from D-alanyl-D-alanine; one of four, DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains; Derived by automated computational analysis using gene prediction method: Protein Homology.; D-alanyl-D-alanine carboxypeptidase 3459365 16980957 LY180_16435 Escherichia coli LY180 D-alanyl-D-alanine carboxypeptidase YP_008566348.1 3457932 D 1335916 CDS YP_008566349.1 544391668 16980958 complement(3459405..3460577) 1 NC_022364.1 ObgE; essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; Derived by automated computational analysis using gene prediction method: Protein Homology.; GTPase CgtA 3460577 obgE 16980958 obgE Escherichia coli LY180 GTPase CgtA YP_008566349.1 3459405 R 1335916 CDS YP_008566350.1 544391669 16980959 complement(3460593..3461558) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3461558 16980959 LY180_16445 Escherichia coli LY180 membrane protein YP_008566350.1 3460593 R 1335916 CDS YP_008566351.1 544391670 16980960 complement(3461685..3461942) 1 NC_022364.1 involved in the peptidyltransferase reaction during translation; Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L27 3461942 rpmA 16980960 rpmA Escherichia coli LY180 50S ribosomal protein L27 YP_008566351.1 3461685 R 1335916 CDS YP_008566352.1 544391671 16980961 complement(3461963..3462274) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L21 3462274 rplU 16980961 rplU Escherichia coli LY180 50S ribosomal protein L21 YP_008566352.1 3461963 R 1335916 CDS YP_008566353.1 544391672 16980962 3462533..3463504 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; octaprenyl diphosphate synthase 3463504 16980962 LY180_16460 Escherichia coli LY180 octaprenyl diphosphate synthase YP_008566353.1 3462533 D 1335916 CDS YP_008566354.1 544391673 16980963 3463732..3464010 1 NC_022364.1 activator of maltose metabolism genes; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 3464010 16980963 LY180_16465 Escherichia coli LY180 transcriptional regulator YP_008566354.1 3463732 D 1335916 CDS YP_008566355.1 544391674 16980964 complement(3464058..3465317) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 3465317 16980964 LY180_16470 Escherichia coli LY180 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_008566355.1 3464058 R 1335916 CDS YP_008566356.1 544391675 16980965 complement(3465372..3465641) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3465641 16980965 LY180_16475 Escherichia coli LY180 hypothetical protein YP_008566356.1 3465372 R 1335916 CDS YP_008566357.1 544391676 16980966 complement(3465786..3466079) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phospholipid ABC transporter substrate-binding protein 3466079 16980966 LY180_16480 Escherichia coli LY180 phospholipid ABC transporter substrate-binding protein YP_008566357.1 3465786 R 1335916 CDS YP_008566358.1 544391677 16980967 complement(3466079..3466714) 1 NC_022364.1 involved in maintaining outer membrane lipid asymmetry; Derived by automated computational analysis using gene prediction method: Protein Homology.; organic solvent ABC transporter substrate-binding protein 3466714 16980967 LY180_16485 Escherichia coli LY180 organic solvent ABC transporter substrate-binding protein YP_008566358.1 3466079 R 1335916 CDS YP_008566359.1 544391678 16980968 complement(3466733..3467299) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phospholipid ABC transporter substrate-binding protein 3467299 16980968 LY180_16490 Escherichia coli LY180 phospholipid ABC transporter substrate-binding protein YP_008566359.1 3466733 R 1335916 CDS YP_008566360.1 544391679 16980969 complement(3467289..3468071) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ABC transporter permease 3468071 16980969 LY180_16495 Escherichia coli LY180 ABC transporter permease YP_008566360.1 3467289 R 1335916 CDS YP_008566361.1 544391680 16980970 complement(3468079..3468888) 1 NC_022364.1 ABC transporter maintaining outer membrane lipid asymmetry; Derived by automated computational analysis using gene prediction method: Protein Homology.; organic solvent ABC transporter ATP-binding protein 3468888 16980970 LY180_16500 Escherichia coli LY180 organic solvent ABC transporter ATP-binding protein YP_008566361.1 3468079 R 1335916 CDS YP_008566362.1 544391681 16980971 3469098..3470075 1 NC_022364.1 YrbG; inner membrane protein involved in cell envelope integrity; putative sodium ion/calcium ion exchanger; in E. coli it is non essential for cell viability; member of the YRBG family of cation/Ca2+ exchangers; Derived by automated computational analysis using gene prediction method: Protein Homology.; sodium:proton antiporter 3470075 16980971 LY180_16505 Escherichia coli LY180 sodium:proton antiporter YP_008566362.1 3469098 D 1335916 CDS YP_008566363.1 544391682 16980972 3470089..3471075 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; D-arabinose 5-phosphate isomerase 3471075 16980972 LY180_16510 Escherichia coli LY180 D-arabinose 5-phosphate isomerase YP_008566363.1 3470089 D 1335916 CDS YP_008566364.1 544391683 16980973 3471096..3471662 1 NC_022364.1 forms homotetramers; catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate; functions in lipopolysaccharide biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 3471662 16980973 LY180_16515 Escherichia coli LY180 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YP_008566364.1 3471096 D 1335916 CDS YP_008566365.1 544391684 16980974 3471659..3472234 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar ABC transporter substrate-binding protein 3472234 16980974 LY180_16520 Escherichia coli LY180 sugar ABC transporter substrate-binding protein YP_008566365.1 3471659 D 1335916 CDS YP_008566366.1 544391685 16980975 3472203..3472760 1 NC_022364.1 LptA; periplasmic binding protein part of a putative ABC superfamily of uptake transporters; interacts with LptB protein, the ATP binding component of the uptake system; Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar ABC transporter substrate-binding protein 3472760 16980975 LY180_16525 Escherichia coli LY180 sugar ABC transporter substrate-binding protein YP_008566366.1 3472203 D 1335916 CDS YP_008566367.1 544393160 16980976 3472767..3473492 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; lipopolysaccharide ABC transporter ATP-binding protein 3473492 16980976 LY180_16530 Escherichia coli LY180 lipopolysaccharide ABC transporter ATP-binding protein YP_008566367.1 3472767 D 1335916 CDS YP_008566368.1 544391686 16980977 3473540..3474973 1 NC_022364.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; Derived by automated computational analysis using gene prediction method: Protein Homology.; RNA polymerase factor sigma-54 3474973 16980977 LY180_16535 Escherichia coli LY180 RNA polymerase factor sigma-54 YP_008566368.1 3473540 D 1335916 CDS YP_008566369.1 544391687 16980978 3474996..3475283 1 NC_022364.1 YhbH; resting ribosome-binding protein involved in ribosome stabilization and preservation in stationary phase; binds specifically 100S ribosomes (an inactive ribosome product of a 70S ribosome dimerization); seems to be involved in modulation of the sigma(54) (RpoN) activity for quorum sensing; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribosome hibernation promoting factor HPF 3475283 16980978 LY180_16540 Escherichia coli LY180 ribosome hibernation promoting factor HPF YP_008566369.1 3474996 D 1335916 CDS YP_008566370.1 544391688 16980979 3475401..3475892 1 NC_022364.1 involved in nitrogen metabolism; protein IIA is phosphorylated by enzyme I(Ntr); Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS sugar transporter subunit IIA 3475892 16980979 LY180_16545 Escherichia coli LY180 PTS sugar transporter subunit IIA YP_008566370.1 3475401 D 1335916 CDS YP_008566371.1 544391689 16980980 3475938..3476792 1 NC_022364.1 glucosamine-6-phosphate regulated; inactivates the glmS upregulator glmZ; Derived by automated computational analysis using gene prediction method: Protein Homology.; glmZ(sRNA)-inactivating NTPase 3476792 16980980 LY180_16550 Escherichia coli LY180 glmZ(sRNA)-inactivating NTPase YP_008566371.1 3475938 D 1335916 CDS YP_008566372.1 544391690 16980981 3476789..3477061 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphohistidinoprotein-hexose phosphotransferase 3477061 16980981 LY180_16555 Escherichia coli LY180 phosphohistidinoprotein-hexose phosphotransferase YP_008566372.1 3476789 D 1335916 CDS YP_008566373.1 544391691 16980982 3477275..3477907 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3477907 16980982 LY180_16560 Escherichia coli LY180 hypothetical protein YP_008566373.1 3477275 D 1335916 CDS YP_008566374.1 544391692 16980983 complement(3477904..3478632) 1 NC_022364.1 glycosyltransferase; polymerizes glycan strands in the peptidoglycan; Derived by automated computational analysis using gene prediction method: Protein Homology.; monofunctional biosynthetic peptidoglycan transglycosylase 3478632 mtgA 16980983 mtgA Escherichia coli LY180 monofunctional biosynthetic peptidoglycan transglycosylase YP_008566374.1 3477904 R 1335916 CDS YP_008566375.1 544391693 16980984 complement(3478629..3479282) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; isoprenoid biosynthesis protein 3479282 16980984 LY180_16570 Escherichia coli LY180 isoprenoid biosynthesis protein YP_008566375.1 3478629 R 1335916 CDS YP_008566376.1 544391694 16980985 complement(3479512..3481848) 1 NC_022364.1 sensor-regulator protein which regulates the expression of many genes in response to respiratory growth conditions including anaerobic repression of the arc modulon; hybrid sensory histidine kinase in two-component regulatory system with ArcA; Derived by automated computational analysis using gene prediction method: Protein Homology.; aerobic respiration control sensor protein ArcB 3481848 16980985 LY180_16575 Escherichia coli LY180 aerobic respiration control sensor protein ArcB YP_008566376.1 3479512 R 1335916 CDS YP_008566377.1 544391695 16980986 complement(3481944..3482906) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3482906 16980986 LY180_16580 Escherichia coli LY180 hypothetical protein YP_008566377.1 3481944 R 1335916 CDS YP_008566378.1 544393161 16980987 complement(3482919..3483023) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3483023 16980987 LY180_16585 Escherichia coli LY180 hypothetical protein YP_008566378.1 3482919 R 1335916 CDS YP_008566379.1 544391696 16980988 3483440..3488008 1 NC_022364.1 catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutamate synthase subunit alpha 3488008 gltB 16980988 gltB Escherichia coli LY180 glutamate synthase subunit alpha YP_008566379.1 3483440 D 1335916 CDS YP_008566380.1 544391697 16980989 3488021..3489439 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glutamate synthase subunit beta 3489439 16980989 LY180_16595 Escherichia coli LY180 glutamate synthase subunit beta YP_008566380.1 3488021 D 1335916 CDS YP_008566381.1 544393162 16980990 3489623..3490750 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3490750 16980990 LY180_16600 Escherichia coli LY180 hypothetical protein YP_008566381.1 3489623 D 1335916 CDS YP_008566382.1 544391698 16980991 complement(3490810..3491274) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3491274 16980991 LY180_16605 Escherichia coli LY180 hypothetical protein YP_008566382.1 3490810 R 1335916 CDS YP_008566383.1 544391699 16980992 complement(3491271..3492146) 1 NC_022364.1 catalyzes the phosphorylation of the N-acetylmannosamine (ManNAc) liberated from N-acetyl-neuraminic acid by the nanA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; N-acetylmannosamine kinase 3492146 16980992 LY180_16610 Escherichia coli LY180 N-acetylmannosamine kinase YP_008566383.1 3491271 R 1335916 CDS YP_008566384.1 544391700 16980993 complement(3492143..3492832) 1 NC_022364.1 Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; N-acetylmannosamine-6-phosphate 2-epimerase 3492832 16980993 LY180_16615 Escherichia coli LY180 N-acetylmannosamine-6-phosphate 2-epimerase YP_008566384.1 3492143 R 1335916 CDS YP_008566385.1 544391701 16980994 complement(3492880..3494370) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sialic acid transporter 3494370 16980994 LY180_16620 Escherichia coli LY180 sialic acid transporter YP_008566385.1 3492880 R 1335916 CDS YP_008566386.1 544391702 16980995 complement(3494479..3495372) 1 NC_022364.1 catalyzes the formation of pyruvate and N-acetylmannosamine from N-acetylneuraminic acid; Derived by automated computational analysis using gene prediction method: Protein Homology.; N-acetylneuraminate lyase 3495372 16980995 LY180_16625 Escherichia coli LY180 N-acetylneuraminate lyase YP_008566386.1 3494479 R 1335916 CDS YP_008566387.1 544391703 16980996 complement(3495494..3496285) 1 NC_022364.1 Transcriptional repressor of the nan operon that encodes proteins involved in sialic acid utilization; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 3496285 16980996 LY180_16630 Escherichia coli LY180 transcriptional regulator YP_008566387.1 3495494 R 1335916 CDS YP_008566388.1 544391704 16980997 3496665..3498032 1 NC_022364.1 YhcL; uncharacterized member of the DcuC family of anaerobic dicarboxylate transporters; probable role in transport of carboxylates across the inner membrane from the periplasm; its encoding gene is not essential for growth and is probably cryptic; Derived by automated computational analysis using gene prediction method: Protein Homology.; C4-dicarboxylate ABC transporter 3498032 16980997 LY180_16635 Escherichia coli LY180 C4-dicarboxylate ABC transporter YP_008566388.1 3496665 D 1335916 CDS YP_008566389.1 544391705 16980998 complement(3498075..3498572) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidase 3498572 16980998 LY180_16640 Escherichia coli LY180 peptidase YP_008566389.1 3498075 R 1335916 CDS YP_008566390.1 544391706 16980999 complement(3498578..3499216) 1 NC_022364.1 transcriptional activator; required for activation of bacteriophage P1 late promoter; induced by starvation; Derived by automated computational analysis using gene prediction method: Protein Homology.; stringent starvation protein A 3499216 sspA 16980999 sspA Escherichia coli LY180 stringent starvation protein A YP_008566390.1 3498578 R 1335916 CDS YP_008566391.1 544391707 16981000 complement(3499611..3500003) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S9 3500003 16981000 LY180_16650 Escherichia coli LY180 30S ribosomal protein S9 YP_008566391.1 3499611 R 1335916 CDS YP_008566392.1 544391708 16981001 complement(3500019..3500447) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L13 3500447 16981001 LY180_16655 Escherichia coli LY180 50S ribosomal protein L13 YP_008566392.1 3500019 R 1335916 CDS YP_008566393.1 544391709 16981002 complement(3500666..3501793) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3501793 16981002 LY180_16660 Escherichia coli LY180 hypothetical protein YP_008566393.1 3500666 R 1335916 CDS YP_008566394.1 544391710 16981003 3501987..3502385 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3502385 16981003 LY180_16665 Escherichia coli LY180 hypothetical protein YP_008566394.1 3501987 D 1335916 CDS YP_008566395.1 544391711 16981004 3502539..3503906 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; serine endoprotease DegQ 3503906 16981004 LY180_16670 Escherichia coli LY180 serine endoprotease DegQ YP_008566395.1 3502539 D 1335916 CDS YP_008566396.1 544391712 16981005 3503996..3505063 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; serine endoprotease 3505063 16981005 LY180_16675 Escherichia coli LY180 serine endoprotease YP_008566396.1 3503996 D 1335916 CDS YP_008566397.1 544391713 16981006 complement(3505126..3506064) 1 NC_022364.1 oxidizes malate to oxaloacetate; Derived by automated computational analysis using gene prediction method: Protein Homology.; malate dehydrogenase 3506064 16981006 LY180_16680 Escherichia coli LY180 malate dehydrogenase YP_008566397.1 3505126 R 1335916 CDS YP_008566398.1 544391714 16981007 3506499..3506969 1 NC_022364.1 regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes; Derived by automated computational analysis using gene prediction method: Protein Homology.; arginine repressor 3506969 16981007 LY180_16685 Escherichia coli LY180 arginine repressor YP_008566398.1 3506499 D 1335916 CDS YP_008566399.1 544391715 16981008 3507334..3507597 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3507597 16981008 LY180_16690 Escherichia coli LY180 membrane protein YP_008566399.1 3507334 D 1335916 CDS YP_008566400.1 544391716 16981009 complement(3507653..3507925) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3507925 16981009 LY180_16695 Escherichia coli LY180 hypothetical protein YP_008566400.1 3507653 R 1335916 CDS YP_008566401.1 544391717 16981010 complement(3508017..3509984) 1 NC_022364.1 with AaeA forms an efflux pump whose substrates are p-hydroxybenzoic acid 6-hydroxy-2-naphthoic and 2-hydroxycinnamate; Derived by automated computational analysis using gene prediction method: Protein Homology.; hydroxybenzoic acid transporter 3509984 16981010 LY180_16700 Escherichia coli LY180 hydroxybenzoic acid transporter YP_008566401.1 3508017 R 1335916 CDS YP_008566402.1 544391718 16981011 complement(3509990..3510922) 1 NC_022364.1 with AaeB forms an efflux pump whose substrates are p-hydroxybenzoic acid, 6-hydroxy-2-naphthoic and 2-hydroxycinnamate; Derived by automated computational analysis using gene prediction method: Protein Homology.; hydroxybenzoic acid transporter 3510922 16981011 LY180_16705 Escherichia coli LY180 hydroxybenzoic acid transporter YP_008566402.1 3509990 R 1335916 CDS YP_008566403.1 544391719 16981012 complement(3510930..3511202) 1 NC_022364.1 membrane protein AaeX; the gene is a member of the aaeXAB operon; Derived by automated computational analysis using gene prediction method: Protein Homology.; electron transfer flavoprotein FixA 3511202 16981012 LY180_16710 Escherichia coli LY180 electron transfer flavoprotein FixA YP_008566403.1 3510930 R 1335916 CDS YP_008566404.1 544391720 16981013 3511316..3512245 1 NC_022364.1 for aaeXAB operon; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 3512245 16981013 LY180_16715 Escherichia coli LY180 transcriptional regulator YP_008566404.1 3511316 D 1335916 CDS YP_008566405.1 544391721 16981014 complement(3512379..3513824) 1 NC_022364.1 responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17, an exported protein that targets the essential topoisomerase II DNA gyrase; degrades the E. coli plasmid F-encoded CcdA; Derived by automated computational analysis using gene prediction method: Protein Homology.; protease TldD 3513824 tldD 16981014 tldD Escherichia coli LY180 protease TldD YP_008566405.1 3512379 R 1335916 CDS YP_008566406.1 544391722 16981015 complement(3514163..3517963) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3517963 16981015 LY180_16725 Escherichia coli LY180 membrane protein YP_008566406.1 3514163 R 1335916 CDS YP_008566407.1 544391723 16981016 complement(3518031..3519500) 1 NC_022364.1 involved in the processing of the 5'end of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonuclease G 3519500 16981016 LY180_16730 Escherichia coli LY180 ribonuclease G YP_008566407.1 3518031 R 1335916 CDS YP_008566408.1 544391724 16981017 complement(3519490..3520083) 1 NC_022364.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; Maf 3520083 16981017 LY180_16735 Escherichia coli LY180 Maf YP_008566408.1 3519490 R 1335916 CDS YP_008566409.1 544391725 16981018 complement(3520092..3520580) 1 NC_022364.1 part of cell wall structural complex MreBCD; transmembrane component; Derived by automated computational analysis using gene prediction method: Protein Homology.; rod shape-determining protein MreD 3520580 16981018 LY180_16740 Escherichia coli LY180 rod shape-determining protein MreD YP_008566409.1 3520092 R 1335916 CDS YP_008566410.1 544391726 16981019 complement(3520580..3521683) 1 NC_022364.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; Derived by automated computational analysis using gene prediction method: Protein Homology.; rod shape-determining protein MreC 3521683 16981019 LY180_16745 Escherichia coli LY180 rod shape-determining protein MreC YP_008566410.1 3520580 R 1335916 CDS YP_008566411.1 544391727 16981020 complement(3521749..3522792) 1 NC_022364.1 functions in MreBCD complex in some organisms; Derived by automated computational analysis using gene prediction method: Protein Homology.; rod shape-determining protein Mbl 3522792 16981020 LY180_16750 Escherichia coli LY180 rod shape-determining protein Mbl YP_008566411.1 3521749 R 1335916 CDS YP_008566412.1 544391728 16981021 complement(3523097..3525037) 1 NC_022364.1 regulates the degradation of the small RNAs CsrB and CsrC; may function to targate RNase E to specific RNA molecules; Derived by automated computational analysis using gene prediction method: Protein Homology.; regulatory protein 3525037 16981021 LY180_16755 Escherichia coli LY180 regulatory protein YP_008566412.1 3523097 R 1335916 CDS YP_008566413.1 544391729 16981022 3525189..3526163 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; quinone oxidoreductase 3526163 16981022 LY180_16760 Escherichia coli LY180 quinone oxidoreductase YP_008566413.1 3525189 D 1335916 CDS YP_008566414.1 544391730 16981023 3527141..3527611 1 NC_022364.1 composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.; acetyl-CoA carboxylase biotin carboxyl carrier protein 3527611 16981023 LY180_16765 Escherichia coli LY180 acetyl-CoA carboxylase biotin carboxyl carrier protein YP_008566414.1 3527141 D 1335916 CDS YP_008566415.1 544391731 16981024 3527622..3528971 1 NC_022364.1 an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.; acetyl-CoA carboxylase biotin carboxylase subunit 3528971 16981024 LY180_16770 Escherichia coli LY180 acetyl-CoA carboxylase biotin carboxylase subunit YP_008566415.1 3527622 D 1335916 CDS YP_008566416.1 544391732 16981025 3529080..3529322 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3529322 16981025 LY180_16775 Escherichia coli LY180 membrane protein YP_008566416.1 3529080 D 1335916 CDS YP_008566417.1 544391733 16981026 3529312..3530763 1 NC_022364.1 mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions; member of SSS family of sodium/solute symporters; the imported panthothenate is phosphorylated by panthothenate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.; sodium:pantothenate symporter 3530763 panF 16981026 panF Escherichia coli LY180 sodium:pantothenate symporter YP_008566417.1 3529312 D 1335916 CDS YP_008566418.1 544391734 16981027 3530775..3531656 1 NC_022364.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribosomal protein L11 methyltransferase 3531656 prmA 16981027 prmA Escherichia coli LY180 ribosomal protein L11 methyltransferase YP_008566418.1 3530775 D 1335916 CDS YP_008566419.1 544391735 16981028 3531985..3532950 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA-dihydrouridine synthase B 3532950 16981028 LY180_16790 Escherichia coli LY180 tRNA-dihydrouridine synthase B YP_008566419.1 3531985 D 1335916 CDS YP_008566420.1 544391736 16981029 3532976..3533272 1 NC_022364.1 Stimulates excision of phage lambda; affects Mu development; acts as an activator of rRNA and iRNA transcription; Derived by automated computational analysis using gene prediction method: Protein Homology.; Fis family transcriptional regulator 3533272 fis 16981029 fis Escherichia coli LY180 Fis family transcriptional regulator YP_008566420.1 3532976 D 1335916 CDS YP_008566421.1 544391737 16981030 3533358..3534242 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; methyltransferase 3534242 16981030 LY180_16800 Escherichia coli LY180 methyltransferase YP_008566421.1 3533358 D 1335916 CDS YP_008566422.1 544391738 16981031 3534326..3534505 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3534505 16981031 LY180_16805 Escherichia coli LY180 hypothetical protein YP_008566422.1 3534326 D 1335916 CDS YP_008566423.1 544391739 16981032 complement(3534508..3535170) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 3535170 16981032 LY180_16810 Escherichia coli LY180 transcriptional regulator YP_008566423.1 3534508 R 1335916 CDS YP_008566424.1 544391740 16981033 3535569..3536726 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acriflavine resistance protein E 3536726 16981033 LY180_16815 Escherichia coli LY180 acriflavine resistance protein E YP_008566424.1 3535569 D 1335916 CDS YP_008566425.1 544391741 16981034 3536738..3539842 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug transporter 3539842 16981034 LY180_16820 Escherichia coli LY180 multidrug transporter YP_008566425.1 3536738 D 1335916 CDS YP_008566426.1 544391742 16981035 3540095..3540316 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3540316 16981035 LY180_16825 Escherichia coli LY180 membrane protein YP_008566426.1 3540095 D 1335916 CDS YP_008566427.1 544393163 16981036 complement(3540364..3540510) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3540510 16981036 LY180_16830 Escherichia coli LY180 hypothetical protein YP_008566427.1 3540364 R 1335916 CDS YP_008566428.1 544391743 16981037 3540747..3541772 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; amino acid ABC transporter substrate-binding protein 3541772 16981037 LY180_16835 Escherichia coli LY180 amino acid ABC transporter substrate-binding protein YP_008566428.1 3540747 D 1335916 CDS YP_008566429.1 544391744 16981038 3541840..3543021 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; amino acid ABC transporter permease 3543021 16981038 LY180_16840 Escherichia coli LY180 amino acid ABC transporter permease YP_008566429.1 3541840 D 1335916 CDS YP_008566430.1 544391745 16981039 3543031..3544134 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; amino acid ABC transporter permease 3544134 16981039 LY180_16845 Escherichia coli LY180 amino acid ABC transporter permease YP_008566430.1 3543031 D 1335916 CDS YP_008566431.1 544391746 16981040 3544142..3544900 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; amino acid ABC transporter ATP-binding protein 3544900 16981040 LY180_16850 Escherichia coli LY180 amino acid ABC transporter ATP-binding protein YP_008566431.1 3544142 D 1335916 CDS YP_008566432.1 544393164 16981048 complement(3550758..3550922) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3550922 16981048 LY180_16890 Escherichia coli LY180 hypothetical protein YP_008566432.1 3550758 R 1335916 CDS YP_008566433.1 544391747 16981049 3550951..3551505 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3551505 16981049 LY180_16895 Escherichia coli LY180 hypothetical protein YP_008566433.1 3550951 D 1335916 CDS YP_008566434.1 544391748 16981050 complement(3551481..3551738) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3551738 16981050 LY180_16900 Escherichia coli LY180 hypothetical protein YP_008566434.1 3551481 R 1335916 CDS YP_008566435.1 544391749 16981051 complement(3551735..3552553) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; shikimate 5-dehydrogenase 3552553 16981051 LY180_16905 Escherichia coli LY180 shikimate 5-dehydrogenase YP_008566435.1 3551735 R 1335916 CDS YP_008566436.1 544391750 16981052 complement(3552558..3553130) 1 NC_022364.1 involved in the biosynthesis of the threonylcarbamoyladenosine (t6A) residue at position 37 of ANN-decoding tRNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein 3553130 16981052 LY180_16910 Escherichia coli LY180 tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein YP_008566436.1 3552558 R 1335916 CDS YP_008566437.1 544391751 16981053 complement(3553135..3553677) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3553677 16981053 LY180_16915 Escherichia coli LY180 hypothetical protein YP_008566437.1 3553135 R 1335916 CDS YP_008566438.1 544391752 16981054 complement(3553706..3554179) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3554179 16981054 LY180_16920 Escherichia coli LY180 hypothetical protein YP_008566438.1 3553706 R 1335916 CDS YP_008566439.1 544391753 16981055 complement(3554151..3555275) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3555275 16981055 LY180_16925 Escherichia coli LY180 hypothetical protein YP_008566439.1 3554151 R 1335916 CDS YP_008566440.1 544391754 16981056 3555405..3555914 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide deformylase 3555914 16981056 LY180_16930 Escherichia coli LY180 peptide deformylase YP_008566440.1 3555405 D 1335916 CDS YP_008566441.1 544391755 16981057 3555929..3556876 1 NC_022364.1 modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; Derived by automated computational analysis using gene prediction method: Protein Homology.; methionyl-tRNA formyltransferase 3556876 fmt 16981057 fmt Escherichia coli LY180 methionyl-tRNA formyltransferase YP_008566441.1 3555929 D 1335916 CDS YP_008566442.1 544391756 16981058 3556922..3558211 1 NC_022364.1 catalyzes the methylation of cytosine at position 967 (m5C967) of 16S rRNA; SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.; 16S rRNA methyltransferase 3558211 16981058 LY180_16940 Escherichia coli LY180 16S rRNA methyltransferase YP_008566442.1 3556922 D 1335916 CDS YP_008566443.1 544391757 16981059 3558233..3559609 1 NC_022364.1 involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; Derived by automated computational analysis using gene prediction method: Protein Homology.; potassium transporter peripheral membrane protein 3559609 trkA 16981059 trkA Escherichia coli LY180 potassium transporter peripheral membrane protein YP_008566443.1 3558233 D 1335916 CDS YP_008566444.1 544391758 16981060 3559739..3560149 1 NC_022364.1 forms homopentamer; channel that opens in response to pressure or hypoosmotic shock; Derived by automated computational analysis using gene prediction method: Protein Homology.; large-conductance mechanosensitive channel 3560149 mscL 16981060 mscL Escherichia coli LY180 large-conductance mechanosensitive channel YP_008566444.1 3559739 D 1335916 CDS YP_008566445.1 544391759 16981061 complement(3560146..3560364) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Alternative ribosome-rescue factor A 3560364 16981061 LY180_16955 Escherichia coli LY180 Alternative ribosome-rescue factor A YP_008566445.1 3560146 R 1335916 CDS YP_008566446.1 544391760 16981062 complement(3560420..3560845) 1 NC_022364.1 mediates expression of the zinc export protein ZntA in response to high levels of zinc; member of MerR family of transcriptional regulators; Derived by automated computational analysis using gene prediction method: Protein Homology.; zinc-responsive transcriptional regulator 3560845 zntR 16981062 zntR Escherichia coli LY180 zinc-responsive transcriptional regulator YP_008566446.1 3560420 R 1335916 CDS YP_008566447.1 544391761 16981063 complement(3560856..3561224) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3561224 16981063 LY180_16965 Escherichia coli LY180 hypothetical protein YP_008566447.1 3560856 R 1335916 CDS YP_008566448.1 544391762 16981064 complement(3561331..3561714) 1 NC_022364.1 is a component of the macrolide binding site in the peptidyl transferase center; Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L17 3561714 rplQ 16981064 rplQ Escherichia coli LY180 50S ribosomal protein L17 YP_008566448.1 3561331 R 1335916 CDS YP_008566449.1 544391763 16981065 complement(3561755..3562744) 1 NC_022364.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA-directed RNA polymerase subunit alpha 3562744 16981065 LY180_16975 Escherichia coli LY180 DNA-directed RNA polymerase subunit alpha YP_008566449.1 3561755 R 1335916 CDS YP_008566450.1 544391764 16981066 complement(3562770..3563390) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S4 3563390 16981066 LY180_16980 Escherichia coli LY180 30S ribosomal protein S4 YP_008566450.1 3562770 R 1335916 CDS YP_008566451.1 544391765 16981067 complement(3563424..3563813) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S11 3563813 16981067 LY180_16985 Escherichia coli LY180 30S ribosomal protein S11 YP_008566451.1 3563424 R 1335916 CDS YP_008566452.1 544391766 16981068 complement(3563830..3564186) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S13 3564186 16981068 LY180_16990 Escherichia coli LY180 30S ribosomal protein S13 YP_008566452.1 3563830 R 1335916 CDS YP_008566453.1 544391767 16981069 complement(3564333..3564449) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L36 3564449 16981069 LY180_16995 Escherichia coli LY180 50S ribosomal protein L36 YP_008566453.1 3564333 R 1335916 CDS YP_008566454.1 544391768 16981070 complement(3564481..3565812) 1 NC_022364.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.; preprotein translocase subunit SecY 3565812 secY 16981070 secY Escherichia coli LY180 preprotein translocase subunit SecY YP_008566454.1 3564481 R 1335916 CDS YP_008566455.1 544391769 16981071 complement(3565820..3566254) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L15 3566254 16981071 LY180_17005 Escherichia coli LY180 50S ribosomal protein L15 YP_008566455.1 3565820 R 1335916 CDS YP_008566456.1 544391770 16981072 complement(3566258..3566437) 1 NC_022364.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L30 3566437 rpmD 16981072 rpmD Escherichia coli LY180 50S ribosomal protein L30 YP_008566456.1 3566258 R 1335916 CDS YP_008566457.1 544391771 16981073 complement(3566441..3566944) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S5 3566944 16981073 LY180_17015 Escherichia coli LY180 30S ribosomal protein S5 YP_008566457.1 3566441 R 1335916 CDS YP_008566458.1 544391772 16981074 complement(3566959..3567312) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L18 3567312 16981074 LY180_17020 Escherichia coli LY180 50S ribosomal protein L18 YP_008566458.1 3566959 R 1335916 CDS YP_008566459.1 544391773 16981075 complement(3567322..3567855) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L6 3567855 16981075 LY180_17025 Escherichia coli LY180 50S ribosomal protein L6 YP_008566459.1 3567322 R 1335916 CDS YP_008566460.1 544391774 16981076 complement(3567868..3568260) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S8 3568260 16981076 LY180_17030 Escherichia coli LY180 30S ribosomal protein S8 YP_008566460.1 3567868 R 1335916 CDS YP_008566461.1 544391775 16981077 complement(3568294..3568599) 1 NC_022364.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S14 3568599 rpsN 16981077 rpsN Escherichia coli LY180 30S ribosomal protein S14 YP_008566461.1 3568294 R 1335916 CDS YP_008566462.1 544391776 16981078 complement(3568614..3569153) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L5 3569153 16981078 LY180_17040 Escherichia coli LY180 50S ribosomal protein L5 YP_008566462.1 3568614 R 1335916 CDS YP_008566463.1 544391777 16981079 complement(3569168..3569482) 1 NC_022364.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L24 3569482 rplX 16981079 rplX Escherichia coli LY180 50S ribosomal protein L24 YP_008566463.1 3569168 R 1335916 CDS YP_008566464.1 544391778 16981080 complement(3569493..3569864) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L14 3569864 16981080 LY180_17050 Escherichia coli LY180 50S ribosomal protein L14 YP_008566464.1 3569493 R 1335916 CDS YP_008566465.1 544391779 16981081 complement(3570029..3570283) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S17 3570283 16981081 LY180_17055 Escherichia coli LY180 30S ribosomal protein S17 YP_008566465.1 3570029 R 1335916 CDS YP_008566466.1 544391780 16981082 complement(3570283..3570474) 1 NC_022364.1 one of the stabilizing components for the large ribosomal subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L29 3570474 16981082 LY180_17060 Escherichia coli LY180 50S ribosomal protein L29 YP_008566466.1 3570283 R 1335916 CDS YP_008566467.1 544391781 16981083 complement(3570474..3570884) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L16 3570884 16981083 LY180_17065 Escherichia coli LY180 50S ribosomal protein L16 YP_008566467.1 3570474 R 1335916 CDS YP_008566468.1 544391782 16981084 complement(3570897..3571598) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S3 3571598 16981084 LY180_17070 Escherichia coli LY180 30S ribosomal protein S3 YP_008566468.1 3570897 R 1335916 CDS YP_008566469.1 544391783 16981085 complement(3571616..3571948) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L22 3571948 16981085 LY180_17075 Escherichia coli LY180 50S ribosomal protein L22 YP_008566469.1 3571616 R 1335916 CDS YP_008566470.1 544391784 16981086 complement(3571963..3572241) 1 NC_022364.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S19 3572241 rpsS 16981086 rpsS Escherichia coli LY180 30S ribosomal protein S19 YP_008566470.1 3571963 R 1335916 CDS YP_008566471.1 544391785 16981087 complement(3572258..3573079) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L2 3573079 16981087 LY180_17085 Escherichia coli LY180 50S ribosomal protein L2 YP_008566471.1 3572258 R 1335916 CDS YP_008566472.1 544391786 16981088 complement(3573097..3573399) 1 NC_022364.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L23 3573399 rplW 16981088 rplW Escherichia coli LY180 50S ribosomal protein L23 YP_008566472.1 3573097 R 1335916 CDS YP_008566473.1 544391787 16981089 complement(3573396..3574001) 1 NC_022364.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L4 3574001 rplD 16981089 rplD Escherichia coli LY180 50S ribosomal protein L4 YP_008566473.1 3573396 R 1335916 CDS YP_008566474.1 544391788 16981090 complement(3574012..3574641) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L3 3574641 16981090 LY180_17100 Escherichia coli LY180 50S ribosomal protein L3 YP_008566474.1 3574012 R 1335916 CDS YP_008566475.1 544391789 16981091 complement(3574674..3574985) 1 NC_022364.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S10 3574985 rpsJ 16981091 rpsJ Escherichia coli LY180 30S ribosomal protein S10 YP_008566475.1 3574674 R 1335916 CDS YP_008566476.1 544391790 16981092 3575364..3575831 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidase A24 3575831 16981092 LY180_17110 Escherichia coli LY180 peptidase A24 YP_008566476.1 3575364 D 1335916 CDS YP_008566477.1 544391791 16981093 complement(3575828..3576304) 1 NC_022364.1 iron storage protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; bacterioferritin 3576304 16981093 LY180_17115 Escherichia coli LY180 bacterioferritin YP_008566477.1 3575828 R 1335916 CDS YP_008566478.1 544391792 16981094 complement(3576377..3576571) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; bacterioferritin-associated ferredoxin 3576571 16981094 LY180_17120 Escherichia coli LY180 bacterioferritin-associated ferredoxin YP_008566478.1 3576377 R 1335916 CDS YP_008566479.1 544393165 16981095 complement(3576754..3577938) 1 NC_022364.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; elongation factor Tu 3577938 tuf 16981095 tuf Escherichia coli LY180 elongation factor Tu YP_008566479.1 3576754 R 1335916 CDS YP_008566480.1 544391793 16981096 complement(3578009..3580123) 1 NC_022364.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; Derived by automated computational analysis using gene prediction method: Protein Homology.; elongation factor G 3580123 fusA 16981096 fusA Escherichia coli LY180 elongation factor G YP_008566480.1 3578009 R 1335916 CDS YP_008566481.1 544391794 16981097 complement(3580220..3580690) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S7 3580690 16981097 LY180_17135 Escherichia coli LY180 30S ribosomal protein S7 YP_008566481.1 3580220 R 1335916 CDS YP_008566482.1 544391795 16981098 complement(3580787..3581161) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S12 3581161 16981098 LY180_17140 Escherichia coli LY180 30S ribosomal protein S12 YP_008566482.1 3580787 R 1335916 CDS YP_008566483.1 544391796 16981099 complement(3581287..3581574) 1 NC_022364.1 in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.; sulfur transfer complex subunit TusB 3581574 16981099 LY180_17145 Escherichia coli LY180 sulfur transfer complex subunit TusB YP_008566483.1 3581287 R 1335916 CDS YP_008566484.1 544391797 16981100 complement(3581582..3581941) 1 NC_022364.1 in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur transfer that results in thiouridation to U34 position in some tRNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.; sulfur relay protein TusC 3581941 16981100 LY180_17150 Escherichia coli LY180 sulfur relay protein TusC YP_008566484.1 3581582 R 1335916 CDS YP_008566485.1 544391798 16981101 complement(3581941..3582327) 1 NC_022364.1 in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.; sulfur transfer complex subunit TusD 3582327 16981101 LY180_17155 Escherichia coli LY180 sulfur transfer complex subunit TusD YP_008566485.1 3581941 R 1335916 CDS YP_008566486.1 544391799 16981102 complement(3582327..3583049) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3583049 16981102 LY180_17160 Escherichia coli LY180 hypothetical protein YP_008566486.1 3582327 R 1335916 CDS YP_008566487.1 544391800 16981103 complement(3583216..3584028) 1 NC_022364.1 rotamase; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidyl-prolyl cis-trans isomerase 3584028 16981103 LY180_17165 Escherichia coli LY180 peptidyl-prolyl cis-trans isomerase YP_008566487.1 3583216 R 1335916 CDS YP_008566488.1 544391801 16981104 3584249..3584467 1 NC_022364.1 required for phi X174 lysis; Derived by automated computational analysis using gene prediction method: Protein Homology.; lysis protein 3584467 16981104 LY180_17170 Escherichia coli LY180 lysis protein YP_008566488.1 3584249 D 1335916 CDS YP_008566489.1 544391802 16981105 complement(3584516..3585106) 1 NC_022364.1 rotamase; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidyl-prolyl cis-trans isomerase 3585106 16981105 LY180_17175 Escherichia coli LY180 peptidyl-prolyl cis-trans isomerase YP_008566489.1 3584516 R 1335916 CDS YP_008566490.1 544391803 16981106 complement(3585201..3585401) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3585401 16981106 LY180_17180 Escherichia coli LY180 hypothetical protein YP_008566490.1 3585201 R 1335916 CDS YP_008566491.1 544391804 16981107 complement(3585411..3587216) 1 NC_022364.1 involved in potassium efflux; Derived by automated computational analysis using gene prediction method: Protein Homology.; potassium transporter 3587216 16981107 LY180_17185 Escherichia coli LY180 potassium transporter YP_008566491.1 3585411 R 1335916 CDS YP_008566492.1 544391805 16981108 complement(3587216..3587770) 1 NC_022364.1 required for KefB activity; Derived by automated computational analysis using gene prediction method: Protein Homology.; potassium transporter 3587770 16981108 LY180_17190 Escherichia coli LY180 potassium transporter YP_008566492.1 3587216 R 1335916 CDS YP_008566493.1 544391806 16981109 3587898..3589811 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glutathione ABC transporter ATP-binding protein 3589811 16981109 LY180_17195 Escherichia coli LY180 glutathione ABC transporter ATP-binding protein YP_008566493.1 3587898 D 1335916 CDS YP_008566494.1 544391807 16981110 3589811..3590833 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrolase 3590833 16981110 LY180_17200 Escherichia coli LY180 hydrolase YP_008566494.1 3589811 D 1335916 CDS YP_008566495.1 544391808 16981111 3590827..3591045 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3591045 16981111 LY180_17205 Escherichia coli LY180 hypothetical protein YP_008566495.1 3590827 D 1335916 CDS YP_008566496.1 544391809 16981112 3591099..3591968 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoribulokinase 3591968 16981112 LY180_17210 Escherichia coli LY180 phosphoribulokinase YP_008566496.1 3591099 D 1335916 CDS YP_008566497.1 544391810 16981113 complement(3592023..3592427) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3592427 16981113 LY180_17215 Escherichia coli LY180 hypothetical protein YP_008566497.1 3592023 R 1335916 CDS YP_008566498.1 544391811 16981114 3592729..3593361 1 NC_022364.1 cAMP receptor protein; complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 3593361 16981114 LY180_17220 Escherichia coli LY180 transcriptional regulator YP_008566498.1 3592729 D 1335916 CDS YP_008566499.1 544391812 16981115 3593412..3595502 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3595502 16981115 LY180_17225 Escherichia coli LY180 membrane protein YP_008566499.1 3593412 D 1335916 CDS YP_008566500.1 544391813 16981116 complement(3595569..3596789) 1 NC_022364.1 DapATase; bifunctional enzyme that functions in arginine and lysine biosynthetic pathways; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2,6-diaminoheptanedioate; Derived by automated computational analysis using gene prediction method: Protein Homology.; succinyldiaminopimelate aminotransferase 3596789 argD 16981116 argD Escherichia coli LY180 succinyldiaminopimelate aminotransferase YP_008566500.1 3595569 R 1335916 CDS YP_008566501.1 544391814 16981117 complement(3596875..3597438) 1 NC_022364.1 TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.; anthranilate synthase subunit II 3597438 16981117 LY180_17235 Escherichia coli LY180 anthranilate synthase subunit II YP_008566501.1 3596875 R 1335916 CDS YP_008566502.1 544391815 16981118 complement(3597470..3598072) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cell filamentation protein Fic 3598072 16981118 LY180_17240 Escherichia coli LY180 cell filamentation protein Fic YP_008566502.1 3597470 R 1335916 CDS YP_008566503.1 544391816 16981119 complement(3598062..3598229) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3598229 16981119 LY180_17245 Escherichia coli LY180 hypothetical protein YP_008566503.1 3598062 R 1335916 CDS YP_008566504.1 544391817 16981120 complement(3598334..3598906) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidyl-prolyl cis-trans isomerase 3598906 16981120 LY180_17250 Escherichia coli LY180 peptidyl-prolyl cis-trans isomerase YP_008566504.1 3598334 R 1335916 CDS YP_008566505.1 544391818 16981121 3599177..3600358 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 3600358 16981121 LY180_17255 Escherichia coli LY180 transporter YP_008566505.1 3599177 D 1335916 CDS YP_008566506.1 544391819 16981122 3600620..3603163 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrite reductase subunit NirD 3603163 16981122 LY180_17260 Escherichia coli LY180 nitrite reductase subunit NirD YP_008566506.1 3600620 D 1335916 CDS YP_008566507.1 544391820 16981123 3603160..3603486 1 NC_022364.1 involved in reducing nitrite to ammonium to detoxify nitrite accumulation in anaerobic nitrate-respiring cells and regenerate NAD+; bounds to NirB, the cytoplasmic subunit, whose expression is induced at high nitrate concentrations; Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrite reductase small subunit 3603486 nirD 16981123 nirD Escherichia coli LY180 nitrite reductase small subunit YP_008566507.1 3603160 D 1335916 CDS YP_008566508.1 544391821 16981124 3603613..3604419 1 NC_022364.1 member of the FNT family of formate and nitrite transporters; Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrite transporter NirC 3604419 16981124 LY180_17270 Escherichia coli LY180 nitrite transporter NirC YP_008566508.1 3603613 D 1335916 CDS YP_008566509.1 544391822 16981125 3604438..3605811 1 NC_022364.1 multifunction enzyme consisting of uroporphyrin-III C-methyltransferase, precorrin-2 dehydrogenase and sirohydrochlorin ferrochelatase; catalyzes the methylation of uroporphyrinogen III to form precorrin-2, then catalyzes formation of sirohydrochlorin from precorrin-2 and finally catalyzed the formation of siroheme from sirohydrochlorin; Derived by automated computational analysis using gene prediction method: Protein Homology.; siroheme synthase 3605811 cysG 16981125 cysG Escherichia coli LY180 siroheme synthase YP_008566509.1 3604438 D 1335916 CDS YP_008566510.1 544391823 16981126 3606058..3606225 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3606225 16981126 LY180_17280 Escherichia coli LY180 membrane protein YP_008566510.1 3606058 D 1335916 CDS YP_008566511.1 544391824 16981127 3606520..3607857 1 NC_022364.1 inner membrane protein possibly involved in fructoselysine transport; member of the flr operon; Derived by automated computational analysis using gene prediction method: Protein Homology.; fructoselysine transporter 3607857 frlA 16981127 frlA Escherichia coli LY180 fructoselysine transporter YP_008566511.1 3606520 D 1335916 CDS YP_008566512.1 544391825 16981128 3607878..3608900 1 NC_022364.1 catalyzes the conversion of fructoselysine 6-phosphate to glucose 6-phosphate and lysine; Derived by automated computational analysis using gene prediction method: Protein Homology.; fructoselysine-6-P-deglycase 3608900 frlB 16981128 frlB Escherichia coli LY180 fructoselysine-6-P-deglycase YP_008566512.1 3607878 D 1335916 CDS YP_008566513.1 544391826 16981129 3608950..3609780 1 NC_022364.1 YhfOP; YhfP; YhfO; FrlC; catalyzes the interconversion of fructoselysine and psicoselysine; Derived by automated computational analysis using gene prediction method: Protein Homology.; fructoselysine 3-epimerase 3609780 16981129 LY180_17295 Escherichia coli LY180 fructoselysine 3-epimerase YP_008566513.1 3608950 D 1335916 CDS YP_008566514.1 544391827 16981130 3609777..3610562 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fructoselysine 6-kinase 3610562 16981130 LY180_17300 Escherichia coli LY180 fructoselysine 6-kinase YP_008566514.1 3609777 D 1335916 CDS YP_008566515.1 544391828 16981131 3610662..3611393 1 NC_022364.1 may act as a transcriptional regulator of a putative fructoselysine-induced operon containing the yhfM, yhfN, yhfO, yhfP, yhfQ, and yhfR genes; Derived by automated computational analysis using gene prediction method: Protein Homology.; GntR family transcriptional regulator 3611393 16981131 LY180_17305 Escherichia coli LY180 GntR family transcriptional regulator YP_008566515.1 3610662 D 1335916 CDS YP_008566516.1 544391829 16981132 complement(3611545..3612630) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3612630 16981132 LY180_17310 Escherichia coli LY180 hypothetical protein YP_008566516.1 3611545 R 1335916 CDS YP_008566517.1 544391830 16981133 complement(3612642..3613946) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3613946 16981133 LY180_17315 Escherichia coli LY180 membrane protein YP_008566517.1 3612642 R 1335916 CDS YP_008566518.1 544391831 16981134 complement(3613958..3614311) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3614311 16981134 LY180_17320 Escherichia coli LY180 membrane protein YP_008566518.1 3613958 R 1335916 CDS YP_008566519.1 544391832 16981135 complement(3614322..3615200) 1 NC_022364.1 phosphotriesterase homology protein; PhP; YhfV; member of a family of proteins related to phosphotriesterase (PTE); Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrolase 3615200 16981135 LY180_17325 Escherichia coli LY180 hydrolase YP_008566519.1 3614322 R 1335916 CDS YP_008566520.1 544391833 16981136 complement(3615197..3616423) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; mutase 3616423 16981136 LY180_17330 Escherichia coli LY180 mutase YP_008566520.1 3615197 R 1335916 CDS YP_008566521.1 544391834 16981137 complement(3616423..3617586) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3617586 16981137 LY180_17335 Escherichia coli LY180 hypothetical protein YP_008566521.1 3616423 R 1335916 CDS YP_008566522.1 544391835 16981138 complement(3617670..3618032) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3618032 16981138 LY180_17340 Escherichia coli LY180 hypothetical protein YP_008566522.1 3617670 R 1335916 CDS YP_008566523.1 544391836 16981139 complement(3618049..3618954) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3618954 16981139 LY180_17345 Escherichia coli LY180 hypothetical protein YP_008566523.1 3618049 R 1335916 CDS YP_008566524.1 544391837 16981140 complement(3619114..3620118) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tryptophanyl-tRNA synthetase 3620118 16981140 LY180_17350 Escherichia coli LY180 tryptophanyl-tRNA synthetase YP_008566524.1 3619114 R 1335916 CDS YP_008566525.1 544391838 16981141 complement(3620111..3620869) 1 NC_022364.1 catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoglycolate phosphatase 3620869 16981141 LY180_17355 Escherichia coli LY180 phosphoglycolate phosphatase YP_008566525.1 3620111 R 1335916 CDS YP_008566526.1 544391839 16981142 complement(3620862..3621539) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ribulose-phosphate 3-epimerase 3621539 16981142 LY180_17360 Escherichia coli LY180 ribulose-phosphate 3-epimerase YP_008566526.1 3620862 R 1335916 CDS YP_008566527.1 544391840 16981143 complement(3621557..3622393) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA adenine methylase 3622393 16981143 LY180_17365 Escherichia coli LY180 DNA adenine methylase YP_008566527.1 3621557 R 1335916 CDS YP_008566528.1 544391841 16981144 complement(3622500..3623786) 1 NC_022364.1 binds the septal ring; Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division protein DamX 3623786 16981144 LY180_17370 Escherichia coli LY180 cell division protein DamX YP_008566528.1 3622500 R 1335916 CDS YP_008566529.1 544391842 16981145 complement(3623878..3624966) 1 NC_022364.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-dehydroquinate synthase 3624966 aroB 16981145 aroB Escherichia coli LY180 3-dehydroquinate synthase YP_008566529.1 3623878 R 1335916 CDS YP_008566530.1 544393166 16981146 complement(3625023..3625700) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; shikimate kinase 3625700 16981146 LY180_17380 Escherichia coli LY180 shikimate kinase YP_008566530.1 3625023 R 1335916 CDS YP_008566531.1 544391843 16981147 complement(3625945..3627183) 1 NC_022364.1 outer membrane porin probably involved in uptake of extracellular double-stranded DNA; similar to outer membrane competence protein ComE from Haemophilus influenzae and outer membrane protein PilQ involved in type IV pilus production from Pseudomonas aeruginosa; Derived by automated computational analysis using gene prediction method: Protein Homology.; outer membrane porin HofQ 3627183 hofQ 16981147 hofQ Escherichia coli LY180 outer membrane porin HofQ YP_008566531.1 3625945 R 1335916 CDS YP_008566532.1 544391844 16981148 complement(3627489..3627929) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA utilization protein HofO 3627929 16981148 LY180_17390 Escherichia coli LY180 DNA utilization protein HofO YP_008566532.1 3627489 R 1335916 CDS YP_008566533.1 544391845 16981149 complement(3627913..3628452) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA utilization protein HofN 3628452 16981149 LY180_17395 Escherichia coli LY180 DNA utilization protein HofN YP_008566533.1 3627913 R 1335916 CDS YP_008566534.1 544391846 16981150 complement(3628452..3629231) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA utilization protein HofM 3629231 16981150 LY180_17400 Escherichia coli LY180 DNA utilization protein HofM YP_008566534.1 3628452 R 1335916 CDS YP_008566535.1 544391847 16981151 3629351..3631903 1 NC_022364.1 bifunctional murein transglycosylase/murein transpeptidase; penicillin-binding protein 1A; involved in the synthesis of cross-linked peptidoglycan from the lipid intermediates in cell wall formation; penicillin-insensitive transglycosylase catalyzes the formation of linear glycan strands and the penicillin-sensitive transpeptidase catalyzes the cross-linking of the peptide subunits; Derived by automated computational analysis using gene prediction method: Protein Homology.; penicillin-binding protein 1a 3631903 mrcA 16981151 mrcA Escherichia coli LY180 penicillin-binding protein 1a YP_008566535.1 3629351 D 1335916 CDS YP_008566536.1 544391848 16981152 complement(3631928..3632056) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3632056 16981152 LY180_17410 Escherichia coli LY180 hypothetical protein YP_008566536.1 3631928 R 1335916 CDS YP_008566537.1 544391849 16981153 complement(3632068..3632628) 1 NC_022364.1 ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose; Derived by automated computational analysis using gene prediction method: Protein Homology.; adenosine nucleotide hydrolase 3632628 nudE 16981153 nudE Escherichia coli LY180 adenosine nucleotide hydrolase YP_008566537.1 3632068 R 1335916 CDS YP_008566538.1 544391850 16981154 3632948..3635083 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Intracellular growth attenuator protein igaA 3635083 16981154 LY180_17420 Escherichia coli LY180 Intracellular growth attenuator protein igaA YP_008566538.1 3632948 D 1335916 CDS YP_008566539.1 544391851 16981155 3635148..3635816 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; nucleotidase 3635816 16981155 LY180_17425 Escherichia coli LY180 nucleotidase YP_008566539.1 3635148 D 1335916 CDS YP_008566540.1 544391852 16981156 3635827..3636228 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ribosome-associated heat shock protein Hsp15 3636228 16981156 LY180_17430 Escherichia coli LY180 ribosome-associated heat shock protein Hsp15 YP_008566540.1 3635827 D 1335916 CDS YP_008566541.1 544391853 16981157 3636247..3637131 1 NC_022364.1 becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; Derived by automated computational analysis using gene prediction method: Protein Homology.; Hsp33 chaperonin 3637131 hslO 16981157 hslO Escherichia coli LY180 Hsp33 chaperonin YP_008566541.1 3636247 D 1335916 CDS YP_008566542.1 544391854 16981158 complement(3637194..3638918) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3638918 16981158 LY180_17440 Escherichia coli LY180 membrane protein YP_008566542.1 3637194 R 1335916 CDS YP_008566543.1 544391855 16981159 3639297..3640919 1 NC_022364.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoenolpyruvate carboxykinase 3640919 16981159 LY180_17445 Escherichia coli LY180 phosphoenolpyruvate carboxykinase YP_008566543.1 3639297 D 1335916 CDS YP_008566544.1 544393167 16981160 3641036..3641353 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; toxin RelE 3641353 16981160 LY180_17450 Escherichia coli LY180 toxin RelE YP_008566544.1 3641036 D 1335916 CDS YP_008566545.1 544391856 16981161 3641412..3641708 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; XRE family transcriptional regulator 3641708 16981161 LY180_17455 Escherichia coli LY180 XRE family transcriptional regulator YP_008566545.1 3641412 D 1335916 CDS YP_008566546.1 544391857 16981162 complement(3641740..3643092) 1 NC_022364.1 membrane-localized osmosensor; histidine kinase; in high osmolarity EnvZ autophosphorylates itself and transfers phosphoryl group to OmpR; Derived by automated computational analysis using gene prediction method: Protein Homology.; osmolarity sensor protein 3643092 envZ 16981162 envZ Escherichia coli LY180 osmolarity sensor protein YP_008566546.1 3641740 R 1335916 CDS YP_008566547.1 544391858 16981163 complement(3643089..3643808) 1 NC_022364.1 part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 3643808 ompR 16981163 ompR Escherichia coli LY180 transcriptional regulator YP_008566547.1 3643089 R 1335916 CDS YP_008566548.1 544391859 16981164 3644036..3644512 1 NC_022364.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcription elongation factor GreB 3644512 greB 16981164 greB Escherichia coli LY180 transcription elongation factor GreB YP_008566548.1 3644036 D 1335916 CDS YP_008566549.1 544391860 16981165 3644609..3646930 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcription accessory protein 3646930 16981165 LY180_17475 Escherichia coli LY180 transcription accessory protein YP_008566549.1 3644609 D 1335916 CDS YP_008566550.1 544391861 16981166 3647368..3647595 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; iron transporter 3647595 feoA 16981166 feoA Escherichia coli LY180 iron transporter YP_008566550.1 3647368 D 1335916 CDS YP_008566551.1 544391862 16981167 3647612..3649933 1 NC_022364.1 cytoplasmic membrane ferrous uptake system permease; mutations disrupt the ability of Escherichia coli to take up ferrous iron; GTP-binding protein which requires GTP for efficient iron(II) uptake; Derived by automated computational analysis using gene prediction method: Protein Homology.; iron transporter 3649933 feoB 16981167 feoB Escherichia coli LY180 iron transporter YP_008566551.1 3647612 D 1335916 CDS YP_008566552.1 544391863 16981168 3649933..3650169 1 NC_022364.1 regulatory protein that controls transcription of feoABC genes; Derived by automated computational analysis using gene prediction method: Protein Homology.; iron transporter 3650169 16981168 LY180_17490 Escherichia coli LY180 iron transporter YP_008566552.1 3649933 D 1335916 CDS YP_008566553.1 544391864 16981170 complement(3651279..3652049) 1 NC_022364.1 Shows carboxylesterase activity with a preference for short chain fatty acid esters; involved in pimeloyl-CoA synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; carboxylesterase BioH 3652049 16981170 LY180_17500 Escherichia coli LY180 carboxylesterase BioH YP_008566553.1 3651279 R 1335916 CDS YP_008566554.1 544391865 16981171 3652087..3652770 1 NC_022364.1 required for utilization of DNA as the sole source of carbon and energy; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA utilization protein GntX 3652770 16981171 LY180_17505 Escherichia coli LY180 DNA utilization protein GntX YP_008566554.1 3652087 D 1335916 CDS YP_008566555.1 544391866 16981172 3652829..3653404 1 NC_022364.1 cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source; Derived by automated computational analysis using gene prediction method: Protein Homology.; Fe/S biogenesis protein NfuA 3653404 16981172 LY180_17510 Escherichia coli LY180 Fe/S biogenesis protein NfuA YP_008566555.1 3652829 D 1335916 CDS YP_008566556.1 544391867 16981173 3653765..3655081 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Gnt-II system L-idonate transporter IdnT 3655081 16981173 LY180_17515 Escherichia coli LY180 Gnt-II system L-idonate transporter IdnT YP_008566556.1 3653765 D 1335916 CDS YP_008566557.1 544391868 16981174 complement(3655126..3657210) 1 NC_022364.1 amylomaltase; acts to release glucose from maltodextrins; Derived by automated computational analysis using gene prediction method: Protein Homology.; 4-alpha-glucanotransferase 3657210 malQ 16981174 malQ Escherichia coli LY180 4-alpha-glucanotransferase YP_008566557.1 3655126 R 1335916 CDS YP_008566558.1 544391869 16981176 3660225..3662930 1 NC_022364.1 Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 3662930 16981176 LY180_17530 Escherichia coli LY180 transcriptional regulator YP_008566558.1 3660225 D 1335916 CDS YP_008566559.1 544391870 16981177 complement(3662973..3663992) 1 NC_022364.1 catalyzes the conversion of terminal3'-phosphate of RNA to the 2',3'-cyclicphosphodiester; Derived by automated computational analysis using gene prediction method: Protein Homology.; RNA 3'-terminal-phosphate cyclase 3663992 16981177 LY180_17535 Escherichia coli LY180 RNA 3'-terminal-phosphate cyclase YP_008566559.1 3662973 R 1335916 CDS YP_008566560.1 544391871 16981178 complement(3663993..3665219) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; RNA-splicing ligase 3665219 16981178 LY180_17540 Escherichia coli LY180 RNA-splicing ligase YP_008566560.1 3663993 R 1335916 CDS YP_008566561.1 544391872 16981179 3665408..3667006 1 NC_022364.1 sigma 54-dependent; regulates genes involved in forming a 2',3'-cyclic phosphodiester on RNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; Fis family transcriptional regulator 3667006 16981179 LY180_17545 Escherichia coli LY180 Fis family transcriptional regulator YP_008566561.1 3665408 D 1335916 CDS YP_008566562.1 544391873 16981180 complement(3666988..3667746) 1 NC_022364.1 represses the glpD, glpFK, glpTQ, and glpACB operons involved in glycerol-3-phosphate metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 3667746 16981180 LY180_17550 Escherichia coli LY180 transcriptional regulator YP_008566562.1 3666988 R 1335916 CDS YP_008566563.1 544391874 16981181 complement(3667763..3668593) 1 NC_022364.1 protease responsible for the cleavage between Ser and Asp residues of proteins in regions of high local hydrophilicity; Derived by automated computational analysis using gene prediction method: Protein Homology.; intramembrane serine protease GlpG 3668593 16981181 LY180_17555 Escherichia coli LY180 intramembrane serine protease GlpG YP_008566563.1 3667763 R 1335916 CDS YP_008566564.1 544391875 16981182 complement(3668638..3668964) 1 NC_022364.1 belongs to rhodanese family; thiosulfate thiotransferase; in Escherichia coli this enzyme catalyzes the formation of thiocyanate from thiosulfate and cyanide with low efficiency; contains an active site cysteine; Derived by automated computational analysis using gene prediction method: Protein Homology.; thiosulfate sulfurtransferase 3668964 glpE 16981182 glpE Escherichia coli LY180 thiosulfate sulfurtransferase YP_008566564.1 3668638 R 1335916 CDS YP_008566565.1 544391876 16981183 3669154..3670659 1 NC_022364.1 in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycerol-3-phosphate dehydrogenase 3670659 glpD 16981183 glpD Escherichia coli LY180 glycerol-3-phosphate dehydrogenase YP_008566565.1 3669154 D 1335916 CDS YP_008566566.1 544393168 16981184 3670962..3672170 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3672170 16981184 LY180_17570 Escherichia coli LY180 hypothetical protein YP_008566566.1 3670962 D 1335916 CDS YP_008566567.1 544391877 16981185 complement(3672180..3672656) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3672656 16981185 LY180_17575 Escherichia coli LY180 membrane protein YP_008566567.1 3672180 R 1335916 CDS YP_008566568.1 544393169 16981186 complement(3672659..3673426) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3673426 16981186 LY180_17580 Escherichia coli LY180 hypothetical protein YP_008566568.1 3672659 R 1335916 CDS YP_008566569.1 544393170 16981187 complement(3673429..3674139) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3674139 16981187 LY180_17585 Escherichia coli LY180 hypothetical protein YP_008566569.1 3673429 R 1335916 CDS YP_008566570.1 544391878 16981188 complement(3674154..3675659) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ABC transporter ATP-binding protein 3675659 16981188 LY180_17590 Escherichia coli LY180 ABC transporter ATP-binding protein YP_008566570.1 3674154 R 1335916 CDS YP_008566571.1 544391879 16981189 complement(3675787..3678234) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glycogen phosphorylase 3678234 16981189 LY180_17595 Escherichia coli LY180 glycogen phosphorylase YP_008566571.1 3675787 R 1335916 CDS YP_008566572.1 544391880 16981190 complement(3678253..3679686) 1 NC_022364.1 catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycogen synthase 3679686 glgA 16981190 glgA Escherichia coli LY180 glycogen synthase YP_008566572.1 3678253 R 1335916 CDS YP_008566573.1 544391881 16981191 complement(3679686..3680981) 1 NC_022364.1 catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; glucose-1-phosphate adenylyltransferase 3680981 glgC 16981191 glgC Escherichia coli LY180 glucose-1-phosphate adenylyltransferase YP_008566573.1 3679686 R 1335916 CDS YP_008566574.1 544391882 16981192 complement(3680999..3682972) 1 NC_022364.1 catalyzes the hydrolysis of the alpha-1,6-glucosidic linkages in partially depolymerized glycogen; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycogen-debranching protein 3682972 16981192 LY180_17610 Escherichia coli LY180 glycogen-debranching protein YP_008566574.1 3680999 R 1335916 CDS YP_008566575.1 544391883 16981193 complement(3682969..3685155) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glycogen-branching protein 3685155 16981193 LY180_17615 Escherichia coli LY180 glycogen-branching protein YP_008566575.1 3682969 R 1335916 CDS YP_008566576.1 544391884 16981194 complement(3685428..3686531) 1 NC_022364.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; Derived by automated computational analysis using gene prediction method: Protein Homology.; aspartate-semialdehyde dehydrogenase 3686531 16981194 LY180_17620 Escherichia coli LY180 aspartate-semialdehyde dehydrogenase YP_008566576.1 3685428 R 1335916 CDS YP_008566577.1 544391885 16981195 3686723..3687316 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3687316 16981195 LY180_17625 Escherichia coli LY180 membrane protein YP_008566577.1 3686723 D 1335916 CDS YP_008566578.1 544391886 16981196 complement(3687373..3688713) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; gluconate transporter 3688713 16981196 LY180_17630 Escherichia coli LY180 gluconate transporter YP_008566578.1 3687373 R 1335916 CDS YP_008566579.1 544391887 16981197 complement(3688717..3689244) 1 NC_022364.1 thermoresistant; catalyzes the formation of 6-phospho-D-gluconate from gluconate; Derived by automated computational analysis using gene prediction method: Protein Homology.; gluconate kinase 1 3689244 gntK 16981197 gntK Escherichia coli LY180 gluconate kinase 1 YP_008566579.1 3688717 R 1335916 CDS YP_008566580.1 544391888 16981198 complement(3689383..3690378) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 3690378 16981198 LY180_17640 Escherichia coli LY180 transcriptional regulator YP_008566580.1 3689383 R 1335916 CDS YP_008566581.1 544391889 16981199 complement(3690602..3691297) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; quercetin 2,3-dioxygenase 3691297 16981199 LY180_17645 Escherichia coli LY180 quercetin 2,3-dioxygenase YP_008566581.1 3690602 R 1335916 CDS YP_008566582.1 544391890 16981200 complement(3691420..3692457) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase 3692457 16981200 LY180_17650 Escherichia coli LY180 oxidoreductase YP_008566582.1 3691420 R 1335916 CDS YP_008566583.1 544391891 16981201 3692789..3693277 1 NC_022364.1 YhhY; regulated by the fur regulator; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.; acetyltransferase 3693277 16981201 LY180_17655 Escherichia coli LY180 acetyltransferase YP_008566583.1 3692789 D 1335916 CDS YP_008566584.1 544391892 16981202 3693514..3694692 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3694692 16981202 LY180_17660 Escherichia coli LY180 hypothetical protein YP_008566584.1 3693514 D 1335916 CDS YP_008566585.1 544393171 16981203 3694689..3695183 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3695183 16981203 LY180_17665 Escherichia coli LY180 hypothetical protein YP_008566585.1 3694689 D 1335916 CDS YP_008566586.1 544391893 16981204 3695633..3695917 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3695917 16981204 LY180_17670 Escherichia coli LY180 hypothetical protein YP_008566586.1 3695633 D 1335916 CDS YP_008566587.1 544391894 16981205 complement(3695955..3697697) 1 NC_022364.1 periplasmic enzyme; post-translationally processed into two subunits which are required for wild-type enzyme activity; cleaves the gammaglutamyl linkages of compounds such as glutathione and transfer the gammaglutamyl group to other amino acids and peptides; Derived by automated computational analysis using gene prediction method: Protein Homology.; gamma-glutamyltranspeptidase 3697697 ggt 16981205 ggt Escherichia coli LY180 gamma-glutamyltranspeptidase YP_008566587.1 3695955 R 1335916 CDS YP_008566588.1 544391895 16981206 3697817..3698257 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3698257 16981206 LY180_17680 Escherichia coli LY180 membrane protein YP_008566588.1 3697817 D 1335916 CDS YP_008566589.1 544391896 16981207 complement(3698244..3698987) 1 NC_022364.1 hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol; induced when cells are starved for inorganic phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; cytoplasmic glycerophosphodiester phosphodiesterase 3698987 ugpQ 16981207 ugpQ Escherichia coli LY180 cytoplasmic glycerophosphodiester phosphodiesterase YP_008566589.1 3698244 R 1335916 CDS YP_008566590.1 544391897 16981208 complement(3698984..3700054) 1 NC_022364.1 part of the UgpABCE glycerol-3-phosphate uptake system; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycerol-3-phosphate ABC transporter ATP-binding protein 3700054 ugpC 16981208 ugpC Escherichia coli LY180 glycerol-3-phosphate ABC transporter ATP-binding protein YP_008566590.1 3698984 R 1335916 CDS YP_008566591.1 544391898 16981209 complement(3700056..3700901) 1 NC_022364.1 with UgpABC is involved in uptake of glycerol-3-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycerol-3-phosphate transporter membrane protein 3700901 16981209 LY180_17695 Escherichia coli LY180 glycerol-3-phosphate transporter membrane protein YP_008566591.1 3700056 R 1335916 CDS YP_008566592.1 544391899 16981210 complement(3700898..3701785) 1 NC_022364.1 with UgpEC is involved in the uptake of glycerol-3-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycerol-3-phosphate transporter permease 3701785 16981210 LY180_17700 Escherichia coli LY180 glycerol-3-phosphate transporter permease YP_008566592.1 3700898 R 1335916 CDS YP_008566593.1 544391900 16981211 complement(3701883..3703199) 1 NC_022364.1 with UgpACE is involved in the uptake of glycerol-3-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycerol-3-phosphate ABC transporter substrate-binding protein 3703199 16981211 LY180_17705 Escherichia coli LY180 glycerol-3-phosphate ABC transporter substrate-binding protein YP_008566593.1 3701883 R 1335916 CDS YP_008566594.1 544393172 16981212 complement(3703596..3704297) 1 NC_022364.1 with LivGHMJ and LivGHMK is part of the high-affinity branched-chain amino acid transport system; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; amino acid ABC transporter ATP-binding protein 3704297 livF 16981212 livF Escherichia coli LY180 amino acid ABC transporter ATP-binding protein YP_008566594.1 3703596 R 1335916 CDS YP_008566595.1 544393173 16981213 complement(3704311..3705078) 1 NC_022364.1 Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; amino acid ABC transporter ATP-binding protein 3705078 livG 16981213 livG Escherichia coli LY180 amino acid ABC transporter ATP-binding protein YP_008566595.1 3704311 R 1335916 CDS YP_008566596.1 544391901 16981214 complement(3705075..3706352) 1 NC_022364.1 Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; Derived by automated computational analysis using gene prediction method: Protein Homology.; leucine/isoleucine/valine transporter permease subunit 3706352 livM 16981214 livM Escherichia coli LY180 leucine/isoleucine/valine transporter permease subunit YP_008566596.1 3705075 R 1335916 CDS YP_008566597.1 544391902 16981215 complement(3706349..3707275) 1 NC_022364.1 LivHMGF is the membrane component of the LIV-I/LS branched-chain amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.; branched-chain amino acid transporter permease subunit LivH 3707275 16981215 LY180_17725 Escherichia coli LY180 branched-chain amino acid transporter permease subunit LivH YP_008566597.1 3706349 R 1335916 CDS YP_008566598.1 544391903 16981216 complement(3707323..3708432) 1 NC_022364.1 with LivFGHM is involved in the high affinity leucine transport; Derived by automated computational analysis using gene prediction method: Protein Homology.; amino acid ABC transporter substrate-binding protein 3708432 16981216 LY180_17730 Escherichia coli LY180 amino acid ABC transporter substrate-binding protein YP_008566598.1 3707323 R 1335916 CDS YP_008566599.1 544391904 16981217 3708856..3709239 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3709239 16981217 LY180_17735 Escherichia coli LY180 hypothetical protein YP_008566599.1 3708856 D 1335916 CDS YP_008566600.1 544391905 16981218 complement(3709236..3709763) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acetyltransferase 3709763 16981218 LY180_17740 Escherichia coli LY180 acetyltransferase YP_008566600.1 3709236 R 1335916 CDS YP_008566601.1 544391906 16981219 complement(3709770..3710036) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; toxin-antitoxin system protein 3710036 16981219 LY180_17745 Escherichia coli LY180 toxin-antitoxin system protein YP_008566601.1 3709770 R 1335916 CDS YP_008566602.1 544391907 16981220 complement(3710186..3711289) 1 NC_022364.1 with LivFGHM is involved in the high affinity leucine transport; Derived by automated computational analysis using gene prediction method: Protein Homology.; amino acid ABC transporter substrate-binding protein 3711289 16981220 LY180_17750 Escherichia coli LY180 amino acid ABC transporter substrate-binding protein YP_008566602.1 3710186 R 1335916 CDS YP_008566603.1 544391908 16981221 complement(3711560..3712414) 1 NC_022364.1 binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; Derived by automated computational analysis using gene prediction method: Protein Homology.; RNA polymerase factor sigma-32 3712414 16981221 LY180_17755 Escherichia coli LY180 RNA polymerase factor sigma-32 YP_008566603.1 3711560 R 1335916 CDS YP_008566604.1 544391909 16981222 complement(3712659..3713717) 1 NC_022364.1 ABC transporter, membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division protein FtsX 3713717 ftsX 16981222 ftsX Escherichia coli LY180 cell division protein FtsX YP_008566604.1 3712659 R 1335916 CDS YP_008566605.1 544391910 16981223 complement(3713710..3714378) 1 NC_022364.1 Part of the ABC transporter complex tauABC involved in taurine import; Derived by automated computational analysis using gene prediction method: Protein Homology.; taurine ABC transporter ATP-binding protein 3714378 tauB 16981223 tauB Escherichia coli LY180 taurine ABC transporter ATP-binding protein YP_008566605.1 3713710 R 1335916 CDS YP_008566606.1 544391911 16981224 complement(3714381..3715874) 1 NC_022364.1 cell division protein; signal recognition protein receptor; functions in the targeting and insertion of membrane proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division protein FtsY 3715874 16981224 LY180_17770 Escherichia coli LY180 cell division protein FtsY YP_008566606.1 3714381 R 1335916 CDS YP_008566607.1 544391912 16981225 3716024..3716620 1 NC_022364.1 catalyzes the methylation of 16S rRNA at position G966; Derived by automated computational analysis using gene prediction method: Protein Homology.; 16S rRNA methyltransferase 3716620 rsmD 16981225 rsmD Escherichia coli LY180 16S rRNA methyltransferase YP_008566607.1 3716024 D 1335916 CDS YP_008566608.1 544391913 16981226 3716610..3716879 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3716879 16981226 LY180_17780 Escherichia coli LY180 membrane protein YP_008566608.1 3716610 D 1335916 CDS YP_008566609.1 544391914 16981227 complement(3716882..3717241) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3717241 16981227 LY180_17785 Escherichia coli LY180 hypothetical protein YP_008566609.1 3716882 R 1335916 CDS YP_008566610.1 544391915 16981228 3717382..3718008 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3718008 16981228 LY180_17790 Escherichia coli LY180 membrane protein YP_008566610.1 3717382 D 1335916 CDS YP_008566611.1 544391916 16981229 3718082..3720280 1 NC_022364.1 P-type ATPase involved in the export of lead, cadmium, zinc and mercury; Derived by automated computational analysis using gene prediction method: Protein Homology.; zinc/cadmium/mercury/lead-transporting ATPase 3720280 zntA 16981229 zntA Escherichia coli LY180 zinc/cadmium/mercury/lead-transporting ATPase YP_008566611.1 3718082 D 1335916 CDS YP_008566612.1 544391917 16981230 complement(3720382..3720627) 1 NC_022364.1 TusA; transfers sulfur to TusBCD complex; involved in thiouridation of U34 position of some tRNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.; sulfurtransferase 3720627 16981230 LY180_17800 Escherichia coli LY180 sulfurtransferase YP_008566612.1 3720382 R 1335916 CDS YP_008566613.1 544391918 16981231 3720848..3721513 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3721513 16981231 LY180_17805 Escherichia coli LY180 membrane protein YP_008566613.1 3720848 D 1335916 CDS YP_008566614.1 544391919 16981232 3721586..3722143 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3722143 16981232 LY180_17810 Escherichia coli LY180 hypothetical protein YP_008566614.1 3721586 D 1335916 CDS YP_008566615.1 544391920 16981233 complement(3722147..3723364) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; MFS transporter 3723364 16981233 LY180_17815 Escherichia coli LY180 MFS transporter YP_008566615.1 3722147 R 1335916 CDS YP_008566616.1 544391921 16981234 3723496..3724545 1 NC_022364.1 transport of quorum-sensing signal; mutations in this gene alters the transport of the quorum-sensing signal autoinducer 2 (AI-2) which affects expression of a large number of genes; Derived by automated computational analysis using gene prediction method: Protein Homology.; pheromone autoinducer 2 transporter 3724545 tqsA 16981234 tqsA Escherichia coli LY180 pheromone autoinducer 2 transporter YP_008566616.1 3723496 D 1335916 CDS YP_008566617.1 544391922 16981235 3724600..3725187 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ACP synthase 3725187 16981235 LY180_17825 Escherichia coli LY180 ACP synthase YP_008566617.1 3724600 D 1335916 CDS YP_008566618.1 544391923 16981236 3725298..3726872 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; nickel ABC transporter substrate-binding protein 3726872 16981236 LY180_17830 Escherichia coli LY180 nickel ABC transporter substrate-binding protein YP_008566618.1 3725298 D 1335916 CDS YP_008566619.1 544391924 16981237 3726872..3727816 1 NC_022364.1 with NikACDE is involved in nickel transport into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; nickel ABC transporter permease 3727816 16981237 LY180_17835 Escherichia coli LY180 nickel ABC transporter permease YP_008566619.1 3726872 D 1335916 CDS YP_008566620.1 544391925 16981238 3727813..3728646 1 NC_022364.1 with NikABDE is involved in nickel transport into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; nickel ABC transporter permease 3728646 nikC 16981238 nikC Escherichia coli LY180 nickel ABC transporter permease YP_008566620.1 3727813 D 1335916 CDS YP_008566621.1 544391926 16981240 3730219..3730620 1 NC_022364.1 Inhibits transcription at high concentrations of nickel; Derived by automated computational analysis using gene prediction method: Protein Homology.; nickel responsive regulator 3730620 16981240 LY180_17850 Escherichia coli LY180 nickel responsive regulator YP_008566621.1 3730219 D 1335916 CDS YP_008566622.1 544391927 16981241 complement(3730740..3731099) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA repair protein HhH-GPD 3731099 16981241 LY180_17855 Escherichia coli LY180 DNA repair protein HhH-GPD YP_008566622.1 3730740 R 1335916 CDS YP_008566623.1 544391928 16981242 complement(3731430..3732554) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3732554 16981242 LY180_17860 Escherichia coli LY180 membrane protein YP_008566623.1 3731430 R 1335916 CDS YP_008566624.1 544393174 16981243 complement(3732554..3735289) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; multidrug ABC transporter ATP-binding protein 3735289 16981243 LY180_17865 Escherichia coli LY180 multidrug ABC transporter ATP-binding protein YP_008566624.1 3732554 R 1335916 CDS YP_008566625.1 544391929 16981244 complement(3735286..3736353) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3736353 16981244 LY180_17870 Escherichia coli LY180 membrane protein YP_008566625.1 3735286 R 1335916 CDS YP_008566626.1 544391930 16982290 complement(3738603..3740192) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3740192 16982290 LY180_17875 Escherichia coli LY180 hypothetical protein YP_008566626.1 3738603 R 1335916 CDS YP_008566627.1 544391931 16981246 3740576..3741628 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3741628 16981246 LY180_17880 Escherichia coli LY180 membrane protein YP_008566627.1 3740576 D 1335916 CDS YP_008566628.1 544393175 16981247 complement(3741708..3741809) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3741809 16981247 LY180_17885 Escherichia coli LY180 hypothetical protein YP_008566628.1 3741708 R 1335916 CDS YP_008566629.1 544391932 16981248 complement(3741944..3743146) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3743146 16981248 LY180_17890 Escherichia coli LY180 membrane protein YP_008566629.1 3741944 R 1335916 CDS YP_008566630.1 544391933 16981249 3743378..3744877 1 NC_022364.1 involved in the transport of inorganic phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphate transporter PitA 3744877 16981249 LY180_17895 Escherichia coli LY180 phosphate transporter PitA YP_008566630.1 3743378 D 1335916 CDS YP_008566631.1 544391934 16981250 complement(3744948..3745283) 1 NC_022364.1 ppGpp-dependent, membrane associated, stress protein produced under conditions of nutrient deprivation, osmotic shock and oxidative stress; Derived by automated computational analysis using gene prediction method: Protein Homology.; universal stress protein B 3745283 16981250 LY180_17900 Escherichia coli LY180 universal stress protein B YP_008566631.1 3744948 R 1335916 CDS YP_008566632.1 544391935 16981251 3745674..3746108 1 NC_022364.1 involved in resistance to DNA-damaging agents; Derived by automated computational analysis using gene prediction method: Protein Homology.; universal stress protein A 3746108 16981251 LY180_17905 Escherichia coli LY180 universal stress protein A YP_008566632.1 3745674 D 1335916 CDS YP_008566633.1 544391936 16981252 3746426..3747895 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; MFS transporter 3747895 16981252 LY180_17910 Escherichia coli LY180 MFS transporter YP_008566633.1 3746426 D 1335916 CDS YP_008566634.1 544391937 16981253 complement(3747944..3748696) 1 NC_022364.1 predicted SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.; methyltransferase 3748696 16981253 LY180_17915 Escherichia coli LY180 methyltransferase YP_008566634.1 3747944 R 1335916 CDS YP_008566635.1 544391938 16981254 complement(3748704..3750746) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; oligopeptidase A 3750746 16981254 LY180_17920 Escherichia coli LY180 oligopeptidase A YP_008566635.1 3748704 R 1335916 CDS YP_008566636.1 544391939 16981255 3750949..3751791 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3751791 16981255 LY180_17925 Escherichia coli LY180 hypothetical protein YP_008566636.1 3750949 D 1335916 CDS YP_008566637.1 544391940 16981256 3751863..3753215 1 NC_022364.1 catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutathione reductase 3753215 16981256 LY180_17930 Escherichia coli LY180 glutathione reductase YP_008566637.1 3751863 D 1335916 CDS YP_008566638.1 544393176 16981257 complement(3753269..3753352) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3753352 16981257 LY180_17935 Escherichia coli LY180 hypothetical protein YP_008566638.1 3753269 R 1335916 CDS YP_008566639.1 544391941 16981258 3754092..3754445 1 NC_022364.1 regulates the expression of of the arsRBC involved in resistance to arsenic; Derived by automated computational analysis using gene prediction method: Protein Homology.; ArsR family transcriptional regulator 3754445 16981258 LY180_17940 Escherichia coli LY180 ArsR family transcriptional regulator YP_008566639.1 3754092 D 1335916 CDS YP_008566640.1 544391942 16981259 3754499..3755788 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; arylsulfatase 3755788 16981259 LY180_17945 Escherichia coli LY180 arylsulfatase YP_008566640.1 3754499 D 1335916 CDS YP_008566641.1 544391943 16981260 3755801..3756241 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; arsenate reductase 3756241 16981260 LY180_17950 Escherichia coli LY180 arsenate reductase YP_008566641.1 3755801 D 1335916 CDS YP_008566642.1 544393177 16981261 complement(3756369..3756665) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; ArsR family transcriptional regulator 3756665 16981261 LY180_17955 Escherichia coli LY180 ArsR family transcriptional regulator YP_008566642.1 3756369 R 1335916 CDS YP_008566643.1 544393178 16981262 3756773..3757774 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3757774 16981262 LY180_17960 Escherichia coli LY180 hypothetical protein YP_008566643.1 3756773 D 1335916 CDS YP_008566644.1 544391944 16981264 3759824..3760390 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3760390 16981264 LY180_17970 Escherichia coli LY180 membrane protein YP_008566644.1 3759824 D 1335916 CDS YP_008566645.1 544391945 16981265 3760546..3761076 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LuxR family transcriptional regulator 3761076 16981265 LY180_17975 Escherichia coli LY180 LuxR family transcriptional regulator YP_008566645.1 3760546 D 1335916 CDS YP_008566646.1 544391946 16981266 complement(3761118..3761777) 1 NC_022364.1 inner membrane protein involved in cell density-dependent acid resistance; part of the acid fitness island (AFI) of E. coli; Derived by automated computational analysis using gene prediction method: Protein Homology.; magnesium transporter ATPase 3761777 16981266 LY180_17980 Escherichia coli LY180 magnesium transporter ATPase YP_008566646.1 3761118 R 1335916 CDS YP_008566647.1 544391947 16981267 complement(3761829..3762167) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acid-resistance protein HdeB 3762167 hdeB 16981267 hdeB Escherichia coli LY180 acid-resistance protein HdeB YP_008566647.1 3761829 R 1335916 CDS YP_008566648.1 544391948 16981268 complement(3762271..3762603) 1 NC_022364.1 inactive form; Derived by automated computational analysis using gene prediction method: Protein Homology.; acid-resistance protein HdeA 3762603 16981268 LY180_17990 Escherichia coli LY180 acid-resistance protein HdeA YP_008566648.1 3762271 R 1335916 CDS YP_008566649.1 544391949 16981269 3762858..3763430 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acid-resistance protein HdeD 3763430 16981269 LY180_17995 Escherichia coli LY180 acid-resistance protein HdeD YP_008566649.1 3762858 D 1335916 CDS YP_008566650.1 544391950 16981270 3764229..3764756 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LuxR family transcriptional regulator 3764756 16981270 LY180_18000 Escherichia coli LY180 LuxR family transcriptional regulator YP_008566650.1 3764229 D 1335916 CDS YP_008566651.1 544393179 16981271 complement(3764757..3765035) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3765035 16981271 LY180_18005 Escherichia coli LY180 hypothetical protein YP_008566651.1 3764757 R 1335916 CDS YP_008566652.1 544391951 16981272 3765095..3766252 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug transporter 3766252 16981272 LY180_18010 Escherichia coli LY180 multidrug transporter YP_008566652.1 3765095 D 1335916 CDS YP_008566653.1 544391952 16981273 3766277..3769390 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug transporter 3769390 16981273 LY180_18015 Escherichia coli LY180 multidrug transporter YP_008566653.1 3766277 D 1335916 CDS YP_008566654.1 544391953 16981274 complement(3769753..3770481) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; AraC family transcriptional regulator 3770481 16981274 LY180_18020 Escherichia coli LY180 AraC family transcriptional regulator YP_008566654.1 3769753 R 1335916 CDS YP_008566655.1 544391954 16981275 complement(3770849..3771673) 1 NC_022364.1 regulates genes in response to acid and/or during stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology.; AraC family transcriptional regulator 3771673 16981275 LY180_18025 Escherichia coli LY180 AraC family transcriptional regulator YP_008566655.1 3770849 R 1335916 CDS YP_008566656.1 544391955 16981276 complement(3772043..3773443) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glutamate decarboxylase 3773443 16981276 LY180_18030 Escherichia coli LY180 glutamate decarboxylase YP_008566656.1 3772043 R 1335916 CDS YP_008566657.1 544391956 16981277 complement(3773654..3775051) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cytochrome C peroxidase 3775051 16981277 LY180_18035 Escherichia coli LY180 cytochrome C peroxidase YP_008566657.1 3773654 R 1335916 CDS YP_008566658.1 544391957 16981278 3775456..3777105 1 NC_022364.1 cytoplasmic; catalyzes the hydrolysis of trehalose to glucose; Derived by automated computational analysis using gene prediction method: Protein Homology.; trehalase 3777105 treF 16981278 treF Escherichia coli LY180 trehalase YP_008566658.1 3775456 D 1335916 CDS YP_008566659.1 544391958 16981279 complement(3777156..3777758) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LuxR family transcriptional regulator 3777758 16981279 LY180_18045 Escherichia coli LY180 LuxR family transcriptional regulator YP_008566659.1 3777156 R 1335916 CDS YP_008566660.1 544391959 16981280 3778206..3779177 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LysR family transcripitonal regulator 3779177 16981280 LY180_18050 Escherichia coli LY180 LysR family transcripitonal regulator YP_008566660.1 3778206 D 1335916 CDS YP_008566661.1 544391960 16981281 3779226..3780239 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3780239 16981281 LY180_18055 Escherichia coli LY180 membrane protein YP_008566661.1 3779226 D 1335916 CDS YP_008566662.1 544391961 16981282 3780650..3781972 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 3781972 16981282 LY180_18060 Escherichia coli LY180 transporter YP_008566662.1 3780650 D 1335916 CDS YP_008566663.1 544391962 16981283 complement(3782206..3784266) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3784266 16981283 LY180_18065 Escherichia coli LY180 hypothetical protein YP_008566663.1 3782206 R 1335916 CDS YP_008566664.1 544391963 16981284 complement(3784336..3785103) 1 NC_022364.1 in Escherichia coli this protein is involved in flagellar function; Derived by automated computational analysis using gene prediction method: Protein Homology.; cyclic di-GMP phosphodiesterase 3785103 16981284 LY180_18070 Escherichia coli LY180 cyclic di-GMP phosphodiesterase YP_008566664.1 3784336 R 1335916 CDS YP_008566665.1 544391964 16981285 3785251..3786264 1 NC_022364.1 catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate-6-phosphate from 2-dehydro-3-deoxy-D-gluconate; Derived by automated computational analysis using gene prediction method: Protein Homology.; ketodeoxygluconokinase 3786264 16981285 LY180_18075 Escherichia coli LY180 ketodeoxygluconokinase YP_008566665.1 3785251 D 1335916 CDS YP_008566666.1 544391965 16981286 complement(3786360..3787856) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3787856 16981286 LY180_18080 Escherichia coli LY180 hypothetical protein YP_008566666.1 3786360 R 1335916 CDS YP_008566667.1 544391966 16981287 complement(3788077..3789363) 1 NC_022364.1 involved in the transport of C4-dicarboxylates across the membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; C4-dicarboxylate ABC transporter 3789363 16981287 LY180_18085 Escherichia coli LY180 C4-dicarboxylate ABC transporter YP_008566667.1 3788077 R 1335916 CDS YP_008566668.1 544391967 16981288 complement(3789546..3791534) 1 NC_022364.1 HmsP in Yersinia pestis plays a role in invasion of epithelial cells; the EAL-domain portion of HmsP from Y. pestis shows phosphodiesterase activity which is required for the inhibition of biofilm formation; inner membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; biofilm formation regulator HmsP 3791534 16981288 LY180_18090 Escherichia coli LY180 biofilm formation regulator HmsP YP_008566668.1 3789546 R 1335916 CDS YP_008566669.1 544391968 16981289 complement(3791616..3795089) 1 NC_022364.1 cellulose is produced by the multicellular morphotypes of E. coli and Salmonella typhimurium; the cellulose biosynthesis genes bcsA, bcsB, bcsZ and bcsC are constitutively transcribed, however, cellulose synthesis is dependent on the expression of adrA; Derived by automated computational analysis using gene prediction method: Protein Homology.; cellulose synthase subunit BcsC 3795089 16981289 LY180_18095 Escherichia coli LY180 cellulose synthase subunit BcsC YP_008566669.1 3791616 R 1335916 CDS YP_008566670.1 544391969 16981290 complement(3795071..3796177) 1 NC_022364.1 catalyzes the hydrolysis of 1,4-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans; Derived by automated computational analysis using gene prediction method: Protein Homology.; endonuclease III 3796177 16981290 LY180_18100 Escherichia coli LY180 endonuclease III YP_008566670.1 3795071 R 1335916 CDS YP_008566671.1 544391970 16981291 complement(3796184..3798460) 1 NC_022364.1 binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Derived by automated computational analysis using gene prediction method: Protein Homology.; cyclic di-GMP regulator CdgR 3798460 16981291 LY180_18105 Escherichia coli LY180 cyclic di-GMP regulator CdgR YP_008566671.1 3796184 R 1335916 CDS YP_008566672.1 544391971 16981292 complement(3798534..3801152) 1 NC_022364.1 polymerizes uridine 5'-diphosphate glucose to cellulose; acts with BcsB, BcsZ and BcsC in cellulose biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; cellulose synthase catalytic subunit 3801152 bcsA 16981292 bcsA Escherichia coli LY180 cellulose synthase catalytic subunit YP_008566672.1 3798534 R 1335916 CDS YP_008566673.1 544391972 16981293 complement(3801149..3801901) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division protein 3801901 16981293 LY180_18115 Escherichia coli LY180 cell division protein YP_008566673.1 3801149 R 1335916 CDS YP_008566674.1 544391973 16981294 complement(3801913..3802101) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3802101 16981294 LY180_18120 Escherichia coli LY180 hypothetical protein YP_008566674.1 3801913 R 1335916 CDS YP_008566675.1 544391974 16981295 3802374..3803945 1 NC_022364.1 required for cellulose biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; cellulose biosynthesis protein BcsE 3803945 16981295 LY180_18125 Escherichia coli LY180 cellulose biosynthesis protein BcsE YP_008566675.1 3802374 D 1335916 CDS YP_008566676.1 544391975 16981296 3803942..3804133 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3804133 16981296 LY180_18130 Escherichia coli LY180 membrane protein YP_008566676.1 3803942 D 1335916 CDS YP_008566677.1 544391976 16981297 3804130..3805809 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3805809 16981297 LY180_18135 Escherichia coli LY180 membrane protein YP_008566677.1 3804130 D 1335916 CDS YP_008566678.1 544393180 16981298 complement(3805896..3806003) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3806003 16981298 LY180_18140 Escherichia coli LY180 hypothetical protein YP_008566678.1 3805896 R 1335916 CDS YP_008566679.1 544393181 16981299 complement(3806379..3806486) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3806486 16981299 LY180_18145 Escherichia coli LY180 hypothetical protein YP_008566679.1 3806379 R 1335916 CDS YP_008566680.1 544393182 16981300 complement(3806862..3806969) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3806969 16981300 LY180_18150 Escherichia coli LY180 hypothetical protein YP_008566680.1 3806862 R 1335916 CDS YP_008566681.1 544391977 16981301 3807445..3808716 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 3808716 16981301 LY180_18155 Escherichia coli LY180 transporter YP_008566681.1 3807445 D 1335916 CDS YP_008566682.1 544391978 16981303 complement(3810741..3811643) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide ABC transporter 3811643 16981303 LY180_18165 Escherichia coli LY180 peptide ABC transporter YP_008566682.1 3810741 R 1335916 CDS YP_008566683.1 544391979 16981304 complement(3811653..3812672) 1 NC_022364.1 transports peptides consisting of two or three amino acids; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide ABC transporter permease 3812672 16981304 LY180_18170 Escherichia coli LY180 peptide ABC transporter permease YP_008566683.1 3811653 R 1335916 CDS YP_008566684.1 544391980 16981306 complement(3812980..3814587) 1 NC_022364.1 DppABCDF is involved in the transport of dipeptides; also binds heme and mediates chemotaxis to dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide ABC transporter substrate-binding protein 3814587 16981306 LY180_18180 Escherichia coli LY180 peptide ABC transporter substrate-binding protein YP_008566684.1 3812980 R 1335916 CDS YP_008566685.1 544391981 16981308 complement(3815668..3817359) 1 NC_022364.1 catalyzes the addition of a phosphoethanolamine group to the outer Kdo residue of lipopolysaccharide; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoethanolamine transferase 3817359 16981308 LY180_18190 Escherichia coli LY180 phosphoethanolamine transferase YP_008566685.1 3815668 R 1335916 CDS YP_008566686.1 544393183 16981309 complement(3817612..3818136) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; long polar fimbrial protein LpfE 3818136 16981309 LY180_18195 Escherichia coli LY180 long polar fimbrial protein LpfE YP_008566686.1 3817612 R 1335916 CDS YP_008566687.1 544393184 16981310 complement(3818142..3819197) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; long polar fimbrial protein LpfD 3819197 16981310 LY180_18200 Escherichia coli LY180 long polar fimbrial protein LpfD YP_008566687.1 3818142 R 1335916 CDS YP_008566688.1 544391982 16981311 complement(3819208..3821739) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein FimD 3821739 16981311 LY180_18205 Escherichia coli LY180 fimbrial protein FimD YP_008566688.1 3819208 R 1335916 CDS YP_008566689.1 544391983 16981312 complement(3821763..3822449) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein StfD 3822449 16981312 LY180_18210 Escherichia coli LY180 fimbrial protein StfD YP_008566689.1 3821763 R 1335916 CDS YP_008566690.1 544391984 16981313 complement(3822533..3823057) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; long polar fimbrial protein LpfA 3823057 16981313 LY180_18215 Escherichia coli LY180 long polar fimbrial protein LpfA YP_008566690.1 3822533 R 1335916 CDS YP_008566691.1 544391985 16981314 complement(3823381..3824583) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3824583 16981314 LY180_18220 Escherichia coli LY180 membrane protein YP_008566691.1 3823381 R 1335916 CDS YP_008566692.1 544391986 16981315 complement(3824812..3825510) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3825510 16981315 LY180_18225 Escherichia coli LY180 hypothetical protein YP_008566692.1 3824812 R 1335916 CDS YP_008566693.1 544391987 16981316 3825668..3826231 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA-3-methyladenine glycosylase 3826231 16981316 LY180_18230 Escherichia coli LY180 DNA-3-methyladenine glycosylase YP_008566693.1 3825668 D 1335916 CDS YP_008566694.1 544391988 16981317 3826228..3826668 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acetyltransferase 3826668 16981317 LY180_18235 Escherichia coli LY180 acetyltransferase YP_008566694.1 3826228 D 1335916 CDS YP_008566695.1 544391989 16981318 complement(3826637..3828970) 1 NC_022364.1 catalyzes the formation of biotin from biotin sulfoxide; Derived by automated computational analysis using gene prediction method: Protein Homology.; biotin sulfoxide reductase 3828970 bisC 16981318 bisC Escherichia coli LY180 biotin sulfoxide reductase YP_008566695.1 3826637 R 1335916 CDS YP_008566696.1 544391990 16981319 3829123..3829782 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; outer membrane lipoprotein 3829782 16981319 LY180_18245 Escherichia coli LY180 outer membrane lipoprotein YP_008566696.1 3829123 D 1335916 CDS YP_008566697.1 544391991 16981320 3829886..3830860 1 NC_022364.1 catalyzes the formation of glycolate from glyoxylate and glycerate from hydroxypyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional glyoxylate/hydroxypyruvate reductase B 3830860 16981320 LY180_18250 Escherichia coli LY180 bifunctional glyoxylate/hydroxypyruvate reductase B YP_008566697.1 3829886 D 1335916 CDS YP_008566698.1 544391992 16981321 complement(3830910..3831620) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3831620 16981321 LY180_18255 Escherichia coli LY180 hypothetical protein YP_008566698.1 3830910 R 1335916 CDS YP_008566699.1 544391993 16981322 3832054..3832344 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; XRE family transcriptional regulator 3832344 16981322 LY180_18260 Escherichia coli LY180 XRE family transcriptional regulator YP_008566699.1 3832054 D 1335916 CDS YP_008566700.1 544391994 16981323 3832625..3832837 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cold-shock protein 3832837 16981323 LY180_18265 Escherichia coli LY180 cold-shock protein YP_008566700.1 3832625 D 1335916 CDS YP_008566701.1 544391995 16981324 complement(3832941..3833177) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3833177 16981324 LY180_18270 Escherichia coli LY180 hypothetical protein YP_008566701.1 3832941 R 1335916 CDS YP_008566702.1 544391996 16981325 complement(3833279..3834130) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; integrase 3834130 16981325 LY180_18275 Escherichia coli LY180 integrase YP_008566702.1 3833279 R 1335916 CDS YP_008566703.1 544391997 16981326 complement(3834127..3834648) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA-binding protein 3834648 16981326 LY180_18280 Escherichia coli LY180 DNA-binding protein YP_008566703.1 3834127 R 1335916 CDS YP_008566704.1 544391998 16981327 complement(3834949..3837018) 1 NC_022364.1 glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycyl-tRNA synthetase 3837018 glyS 16981327 glyS Escherichia coli LY180 glycyl-tRNA synthetase YP_008566704.1 3834949 R 1335916 CDS YP_008566705.1 544391999 16981328 complement(3837028..3837939) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glycyl-tRNA synthetase 3837939 16981328 LY180_18290 Escherichia coli LY180 glycyl-tRNA synthetase YP_008566705.1 3837028 R 1335916 CDS YP_008566706.1 544392000 16981329 complement(3838034..3838333) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3838333 16981329 LY180_18295 Escherichia coli LY180 membrane protein YP_008566706.1 3838034 R 1335916 CDS YP_008566707.1 544392001 16981330 3838508..3839221 1 NC_022364.1 involved in enterobacterial common antigen biosynthesis; catalyzes the addition of O-acetyl groups to the N-acetyl-D-glucosamine residues of the trisaccharide repeat units of the enterobacterial common antigen; Derived by automated computational analysis using gene prediction method: Protein Homology.; O-acetyltransferase 3839221 16981330 LY180_18300 Escherichia coli LY180 O-acetyltransferase YP_008566707.1 3838508 D 1335916 CDS YP_008566708.1 544393185 16981331 3839325..3840533 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3840533 16981331 LY180_18305 Escherichia coli LY180 hypothetical protein YP_008566708.1 3839325 D 1335916 CDS YP_008566709.1 544393186 16981332 3840572..3840841 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3840841 16981332 LY180_18310 Escherichia coli LY180 hypothetical protein YP_008566709.1 3840572 D 1335916 CDS YP_008566710.1 544392002 16981333 complement(3840883..3841320) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3841320 16981333 LY180_18315 Escherichia coli LY180 hypothetical protein YP_008566710.1 3840883 R 1335916 CDS YP_008566711.1 544392003 16981334 complement(3841366..3841707) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3841707 16981334 LY180_18320 Escherichia coli LY180 hypothetical protein YP_008566711.1 3841366 R 1335916 CDS YP_008566712.1 544392004 16981335 complement(3841876..3843330) 1 NC_022364.1 catalyzes the formation of D-xylulose-5-phosphate fro D-xylulose; Derived by automated computational analysis using gene prediction method: Protein Homology.; xylulokinase 3843330 16981335 LY180_18325 Escherichia coli LY180 xylulokinase YP_008566712.1 3841876 R 1335916 CDS YP_008566713.1 544392005 16981336 complement(3843402..3844724) 1 NC_022364.1 catalyzes the interconversion of D-xylose to D-xylulose; Derived by automated computational analysis using gene prediction method: Protein Homology.; xylose isomerase 3844724 16981336 LY180_18330 Escherichia coli LY180 xylose isomerase YP_008566713.1 3843402 R 1335916 CDS YP_008566714.1 544392006 16981337 3845090..3846082 1 NC_022364.1 periplasmic substrate-binding component of the ATP-dependent xylose transport system; high affinity; Derived by automated computational analysis using gene prediction method: Protein Homology.; xylose ABC transporter substrate-binding protein 3846082 xylF 16981337 xylF Escherichia coli LY180 xylose ABC transporter substrate-binding protein YP_008566714.1 3845090 D 1335916 CDS YP_008566715.1 544392007 16981338 3846160..3847701 1 NC_022364.1 with XylFH is part of the high affinity xylose ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.; xylose ABC transporter ATP-binding protein 3847701 16981338 LY180_18340 Escherichia coli LY180 xylose ABC transporter ATP-binding protein YP_008566715.1 3846160 D 1335916 CDS YP_008566716.1 544392008 16981339 3847679..3848860 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; xylose ABC transporter permease 3848860 16981339 LY180_18345 Escherichia coli LY180 xylose ABC transporter permease YP_008566716.1 3847679 D 1335916 CDS YP_008566717.1 544392009 16981340 3848938..3850116 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 3850116 16981340 LY180_18350 Escherichia coli LY180 transcriptional regulator YP_008566717.1 3848938 D 1335916 CDS YP_008566718.1 544392010 16981341 complement(3850224..3851048) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3851048 16981341 LY180_18355 Escherichia coli LY180 hypothetical protein YP_008566718.1 3850224 R 1335916 CDS YP_008566719.1 544392011 16981342 3851368..3853398 1 NC_022364.1 periplasmic enzyme that degrades maltodextrins that enter via the outer membrane porin LamB; hydrolyzes alpha-(1,4) glycosidic linkages; contains internal disulfide bonds; Derived by automated computational analysis using gene prediction method: Protein Homology.; alpha-amylase 3853398 malS 16981342 malS Escherichia coli LY180 alpha-amylase YP_008566719.1 3851368 D 1335916 CDS YP_008566720.1 544392012 16981343 3853576..3854829 1 NC_022364.1 transaminase C; catalyzes transamination of alanine, valine, and 2-aminobutyrate with their respective 2-keto acids; also catalyzes terminal step in valine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; valine--pyruvate aminotransferase 3854829 avtA 16981343 avtA Escherichia coli LY180 valine--pyruvate aminotransferase YP_008566720.1 3853576 D 1335916 CDS YP_008566721.1 544392013 16981344 complement(3854980..3855453) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; electron transporter 3855453 16981344 LY180_18375 Escherichia coli LY180 electron transporter YP_008566721.1 3854980 R 1335916 CDS YP_008566722.1 544392014 16981345 complement(3855555..3856403) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 3856403 16981345 LY180_18380 Escherichia coli LY180 transcriptional regulator YP_008566722.1 3855555 R 1335916 CDS YP_008566723.1 544392015 16981346 3856604..3857602 1 NC_022364.1 NAD(P)H-dependent; catalyzes the reduction of 2,3-diketo-L-gulonate to 3-keto-L-gulonate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2,3-diketo-L-gulonate reductase 3857602 16981346 LY180_18385 Escherichia coli LY180 2,3-diketo-L-gulonate reductase YP_008566723.1 3856604 D 1335916 CDS YP_008566724.1 544392016 16981347 3857614..3858081 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3858081 16981347 LY180_18390 Escherichia coli LY180 hypothetical protein YP_008566724.1 3857614 D 1335916 CDS YP_008566725.1 544392017 16981348 3858199..3858672 1 NC_022364.1 membrane-spanning protein involved in uptake of 2,3-diketo-L-gulonate; part of the tri-partite ATP-independent periplasmic transport system (TRAP) YiaMNO; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2,3-diketo-L-gulonate TRAP transporter permease 3858672 16981348 LY180_18395 Escherichia coli LY180 2,3-diketo-L-gulonate TRAP transporter permease YP_008566725.1 3858199 D 1335916 CDS YP_008566726.1 544392018 16981349 3858675..3859952 1 NC_022364.1 TRAP family transporter; with YiaMO is involved in the uptake of L-dehydroascorbate; Derived by automated computational analysis using gene prediction method: Protein Homology.; dehydroascorbate transporter 3859952 16981349 LY180_18400 Escherichia coli LY180 dehydroascorbate transporter YP_008566726.1 3858675 D 1335916 CDS YP_008566727.1 544392019 16981350 3859965..3860951 1 NC_022364.1 involved in the transport of 2,3-diketo-L-gulonate; Derived by automated computational analysis using gene prediction method: Protein Homology.; C4-dicarboxylate ABC transporter substrate-binding protein 3860951 16981350 LY180_18405 Escherichia coli LY180 C4-dicarboxylate ABC transporter substrate-binding protein YP_008566727.1 3859965 D 1335916 CDS YP_008566728.1 544392020 16981351 3860955..3862451 1 NC_022364.1 catalyzes the formation of L-xylulose 5-phosphate and 3-dehydro-L-gulonate 6-phosphate from L-xylulose or 3-dehydro-L-gulonate, respectively; Derived by automated computational analysis using gene prediction method: Protein Homology.; L-xylulose/3-keto-L-gulonate kinase 3862451 16981351 LY180_18410 Escherichia coli LY180 L-xylulose/3-keto-L-gulonate kinase YP_008566728.1 3860955 D 1335916 CDS YP_008566729.1 544392021 16981352 3862448..3863110 1 NC_022364.1 catalyzes the formation of L-xylulose-5-phosphate from 3-keto-L-gulonate-6-phosphate in anaerobic L-ascorbate utilization; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-keto-L-gulonate-6-phosphate decarboxylase 3863110 ulaD 16981352 ulaD Escherichia coli LY180 3-keto-L-gulonate-6-phosphate decarboxylase YP_008566729.1 3862448 D 1335916 CDS YP_008566730.1 544392022 16981353 3863103..3863963 1 NC_022364.1 L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated; may be involved in the utilization of 2,3-diketo-L-gulonate; Derived by automated computational analysis using gene prediction method: Protein Homology.; L-xylulose 5-phosphate 3-epimerase 3863963 16981353 LY180_18420 Escherichia coli LY180 L-xylulose 5-phosphate 3-epimerase YP_008566730.1 3863103 D 1335916 CDS YP_008566731.1 544392023 16981354 3863957..3864652 1 NC_022364.1 catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; Derived by automated computational analysis using gene prediction method: Protein Homology.; L-ribulose-5-phosphate 4-epimerase 3864652 araD 16981354 araD Escherichia coli LY180 L-ribulose-5-phosphate 4-epimerase YP_008566731.1 3863957 D 1335916 CDS YP_008566732.1 544393187 16981355 complement(3864819..3864959) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3864959 16981355 LY180_18430 Escherichia coli LY180 hypothetical protein YP_008566732.1 3864819 R 1335916 CDS YP_008566733.1 544392024 16981356 complement(3864999..3865739) 1 NC_022364.1 scaffolding protein for the murein polymerase MrcB and the lytic transglycosylase MltA; Derived by automated computational analysis using gene prediction method: Protein Homology.; MltA-interacting protein MipA 3865739 16981356 LY180_18435 Escherichia coli LY180 MltA-interacting protein MipA YP_008566733.1 3864999 R 1335916 CDS YP_008566734.1 544392025 16981357 3865863..3866837 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LysR family transcriptional regulator 3866837 16981357 LY180_18440 Escherichia coli LY180 LysR family transcriptional regulator YP_008566734.1 3865863 D 1335916 CDS YP_008566735.1 544392026 16981358 complement(3866834..3867970) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3867970 16981358 LY180_18445 Escherichia coli LY180 membrane protein YP_008566735.1 3866834 R 1335916 CDS YP_008566736.1 544392027 16981359 complement(3867976..3868299) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3868299 16981359 LY180_18450 Escherichia coli LY180 membrane protein YP_008566736.1 3867976 R 1335916 CDS YP_008566737.1 544393188 16981360 3868482..3868625 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 3868625 16981360 LY180_18455 Escherichia coli LY180 membrane protein YP_008566737.1 3868482 D 1335916 CDS YP_008566738.1 544392028 16981361 complement(3868844..3870382) 1 NC_022364.1 catalyzes the oxidation of acetaldehyde, benzaldehyde, propionaldehyde and other aldehydes; Derived by automated computational analysis using gene prediction method: Protein Homology.; aldehyde dehydrogenase 3870382 16981361 LY180_18460 Escherichia coli LY180 aldehyde dehydrogenase YP_008566738.1 3868844 R 1335916 CDS YP_008566739.1 544392029 16981362 complement(3870547..3871698) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; alcohol dehydrogenase 3871698 16981362 LY180_18465 Escherichia coli LY180 alcohol dehydrogenase YP_008566739.1 3870547 R 1335916 CDS YP_008566740.1 544392030 16981363 complement(3871888..3873732) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; translation elongation factor 3873732 16981363 LY180_18470 Escherichia coli LY180 translation elongation factor YP_008566740.1 3871888 R 1335916 CDS YP_008566741.1 544392031 16981364 complement(3873729..3875120) 1 NC_022364.1 catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; selenocysteine synthase 3875120 16981364 LY180_18475 Escherichia coli LY180 selenocysteine synthase YP_008566741.1 3873729 R 1335916 CDS YP_008566742.1 544392032 16981365 complement(3875218..3875826) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glutathione S-transferase 3875826 16981365 LY180_18480 Escherichia coli LY180 glutathione S-transferase YP_008566742.1 3875218 R 1335916 CDS YP_008566743.1 544393189 16981366 3876055..3880278 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3880278 16981366 LY180_18485 Escherichia coli LY180 hypothetical protein YP_008566743.1 3876055 D 1335916 CDS YP_008566744.1 544392033 16981367 3880250..3880633 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3880633 16981367 LY180_18490 Escherichia coli LY180 hypothetical protein YP_008566744.1 3880250 D 1335916 CDS YP_008566745.1 544392034 16981368 3880738..3881580 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; lyase 3881580 16981368 LY180_18495 Escherichia coli LY180 lyase YP_008566745.1 3880738 D 1335916 CDS YP_008566746.1 544393190 16981369 3881628..3882566 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; type IV secretion protein Rhs 3882566 16981369 LY180_18500 Escherichia coli LY180 type IV secretion protein Rhs YP_008566746.1 3881628 D 1335916 CDS YP_008566747.1 544392035 16981370 3882578..3883039 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3883039 16981370 LY180_18505 Escherichia coli LY180 hypothetical protein YP_008566747.1 3882578 D 1335916 CDS YP_008566748.1 544393191 16981371 3883746..3884183 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3884183 16981371 LY180_18510 Escherichia coli LY180 hypothetical protein YP_008566748.1 3883746 D 1335916 CDS YP_008566749.1 544392036 16981372 complement(3884643..3885779) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3885779 16981372 LY180_18515 Escherichia coli LY180 membrane protein YP_008566749.1 3884643 R 1335916 CDS YP_008566750.1 544392037 16981373 complement(3885782..3886144) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3886144 16981373 LY180_18520 Escherichia coli LY180 hypothetical protein YP_008566750.1 3885782 R 1335916 CDS YP_008566751.1 544392038 16981374 3886681..3888594 1 NC_022364.1 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; subunit IIC forms the translocation channel and contains the specific substrate-binding site; subunit IIA is phosphorylated and transfers the phosphoryl group to the IIB subunit; subunit IIB transfers the phosphoryl group to the substrate; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS mannitol transporter subunit IIABC 3888594 16981374 LY180_18525 Escherichia coli LY180 PTS mannitol transporter subunit IIABC YP_008566751.1 3886681 D 1335916 CDS YP_008566752.1 544392039 16981375 3888824..3889972 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; mannitol-1-phosphate 5-dehydrogenase 3889972 16981375 LY180_18530 Escherichia coli LY180 mannitol-1-phosphate 5-dehydrogenase YP_008566752.1 3888824 D 1335916 CDS YP_008566753.1 544392040 16981376 3889972..3890559 1 NC_022364.1 Acts as a repressor of the mtlAD operon; Derived by automated computational analysis using gene prediction method: Protein Homology.; mannitol repressor protein 3890559 mtlR 16981376 mtlR Escherichia coli LY180 mannitol repressor protein YP_008566753.1 3889972 D 1335916 CDS YP_008566754.1 544392041 16981377 complement(3890571..3890780) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3890780 16981377 LY180_18540 Escherichia coli LY180 hypothetical protein YP_008566754.1 3890571 R 1335916 CDS YP_008566755.1 544392042 16981378 3891065..3891427 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3891427 16981378 LY180_18545 Escherichia coli LY180 hypothetical protein YP_008566755.1 3891065 D 1335916 CDS YP_008566756.1 544392043 16981379 3891971..3892654 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3892654 16981379 LY180_18550 Escherichia coli LY180 membrane protein YP_008566756.1 3891971 D 1335916 CDS YP_008566757.1 544393192 16981380 complement(3892705..3893913) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3893913 16981380 LY180_18555 Escherichia coli LY180 hypothetical protein YP_008566757.1 3892705 R 1335916 CDS YP_008566758.1 544393193 16981381 3894036..3898886 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; adhesin 3898886 16981381 LY180_18560 Escherichia coli LY180 adhesin YP_008566758.1 3894036 D 1335916 CDS YP_008566759.1 544392044 16981382 3899255..3900910 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; L-lactate permease 3900910 16981382 LY180_18565 Escherichia coli LY180 L-lactate permease YP_008566759.1 3899255 D 1335916 CDS YP_008566760.1 544392045 16981383 3900910..3901686 1 NC_022364.1 represses the lctPRD operon; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 3901686 16981383 LY180_18570 Escherichia coli LY180 transcriptional regulator YP_008566760.1 3900910 D 1335916 CDS YP_008566761.1 544392046 16981384 3901683..3902873 1 NC_022364.1 flavin mononucleotide-dependent dehydrogenase; functions in aerobic respiration and also has a role in anaerobic nitrate respiration; Derived by automated computational analysis using gene prediction method: Protein Homology.; L-lactate dehydrogenase 3902873 lldD 16981384 lldD Escherichia coli LY180 L-lactate dehydrogenase YP_008566761.1 3901683 D 1335916 CDS YP_008566762.1 544392047 16981385 3903028..3903501 1 NC_022364.1 member of the SPOUT superfamily of RNA methyltransferases; Derived by automated computational analysis using gene prediction method: Protein Homology.; rRNA methyltransferase 3903501 16981385 LY180_18580 Escherichia coli LY180 rRNA methyltransferase YP_008566762.1 3903028 D 1335916 CDS YP_008566763.1 544392048 16981386 complement(3903554..3904375) 1 NC_022364.1 catalyzes the O-acetylation of serine; Derived by automated computational analysis using gene prediction method: Protein Homology.; serine acetyltransferase 3904375 cysE 16981386 cysE Escherichia coli LY180 serine acetyltransferase YP_008566763.1 3903554 R 1335916 CDS YP_008566764.1 544392049 16981387 complement(3904455..3905474) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 3905474 16981387 LY180_18590 Escherichia coli LY180 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_008566764.1 3904455 R 1335916 CDS YP_008566765.1 544392050 16981388 complement(3905474..3905941) 1 NC_022364.1 molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; Derived by automated computational analysis using gene prediction method: Protein Homology.; preprotein translocase subunit SecB 3905941 16981388 LY180_18595 Escherichia coli LY180 preprotein translocase subunit SecB YP_008566765.1 3905474 R 1335916 CDS YP_008566766.1 544392051 16981389 complement(3906004..3906255) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glutaredoxin 3906255 16981389 LY180_18600 Escherichia coli LY180 glutaredoxin YP_008566766.1 3906004 R 1335916 CDS YP_008566767.1 544392052 16981390 complement(3906397..3906828) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3906828 16981390 LY180_18605 Escherichia coli LY180 hypothetical protein YP_008566767.1 3906397 R 1335916 CDS YP_008566768.1 544392053 16981391 3907073..3908617 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoglyceromutase 3908617 16981391 LY180_18610 Escherichia coli LY180 phosphoglyceromutase YP_008566768.1 3907073 D 1335916 CDS YP_008566769.1 544392054 16981392 3908627..3909910 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidase M37 3909910 16981392 LY180_18615 Escherichia coli LY180 peptidase M37 YP_008566769.1 3908627 D 1335916 CDS YP_008566770.1 544392055 16981393 3909914..3910873 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3910873 16981393 LY180_18620 Escherichia coli LY180 hypothetical protein YP_008566770.1 3909914 D 1335916 CDS YP_008566771.1 544393194 16981394 complement(3910860..3911327) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3911327 16981394 LY180_18625 Escherichia coli LY180 hypothetical protein YP_008566771.1 3910860 R 1335916 CDS YP_008566772.1 544393195 16981395 3911400..3912608 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3912608 16981395 LY180_18630 Escherichia coli LY180 hypothetical protein YP_008566772.1 3911400 D 1335916 CDS YP_008566773.1 544392056 16981396 complement(3912618..3913232) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glycosyl transferase 3913232 16981396 LY180_18635 Escherichia coli LY180 glycosyl transferase YP_008566773.1 3912618 R 1335916 CDS YP_008566774.1 544392057 16981397 complement(3913471..3914496) 1 NC_022364.1 converts threonine and NAD to 1,2-amino-3-oxobutanoate and NADH; functions in threonine catabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.; L-threonine 3-dehydrogenase 3914496 tdh 16981397 tdh Escherichia coli LY180 L-threonine 3-dehydrogenase YP_008566774.1 3913471 R 1335916 CDS YP_008566775.1 544392058 16981398 complement(3914506..3915702) 1 NC_022364.1 catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-amino-3-ketobutyrate CoA ligase 3915702 16981398 LY180_18645 Escherichia coli LY180 2-amino-3-ketobutyrate CoA ligase YP_008566775.1 3914506 R 1335916 CDS YP_008566776.1 544392059 16981399 3915916..3916848 1 NC_022364.1 catalyzes the interconversion between ADP-D-glycero-beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose; Derived by automated computational analysis using gene prediction method: Protein Homology.; ADP-L-glycero-D-mannoheptose-6-epimerase 3916848 rfaD 16981399 rfaD Escherichia coli LY180 ADP-L-glycero-D-mannoheptose-6-epimerase YP_008566776.1 3915916 D 1335916 CDS YP_008566777.1 544392060 16981400 3916858..3917904 1 NC_022364.1 catalyzes the transfer of the second heptose to the heptosyl-KDO2 moiety of the lipopolysaccharide inner core; Derived by automated computational analysis using gene prediction method: Protein Homology.; ADP-heptose:LPS heptosyl transferase 3917904 16981400 LY180_18655 Escherichia coli LY180 ADP-heptose:LPS heptosyl transferase YP_008566777.1 3916858 D 1335916 CDS YP_008566778.1 544392061 16981401 3917908..3918879 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ADP-heptose:LPS heptosyl transferase 3918879 16981401 LY180_18660 Escherichia coli LY180 ADP-heptose:LPS heptosyl transferase YP_008566778.1 3917908 D 1335916 CDS YP_008566779.1 544393196 16981402 complement(3918949..3919911) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; polymerase 3919911 16981402 LY180_18665 Escherichia coli LY180 polymerase YP_008566779.1 3918949 R 1335916 CDS YP_008566780.1 544393197 16981403 complement(3920248..3921231) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; beta1,3-glucosyltransferase 3921231 16981403 LY180_18670 Escherichia coli LY180 beta1,3-glucosyltransferase YP_008566780.1 3920248 R 1335916 CDS YP_008566781.1 544392062 16981404 complement(3921313..3922341) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; lipopolysaccharide 1,3-galactosyltransferase 3922341 16981404 LY180_18675 Escherichia coli LY180 lipopolysaccharide 1,3-galactosyltransferase YP_008566781.1 3921313 R 1335916 CDS YP_008566782.1 544392063 16981405 complement(3922367..3923059) 1 NC_022364.1 catalyzes the phosphorylation of heptose(II) of the outer membrane lipopolysaccharide core; Derived by automated computational analysis using gene prediction method: Protein Homology.; lipopolysaccharide core heptose(II) kinase RfaY 3923059 16981405 LY180_18680 Escherichia coli LY180 lipopolysaccharide core heptose(II) kinase RfaY YP_008566782.1 3922367 R 1335916 CDS YP_008566783.1 544392064 16981406 complement(3923069..3924064) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; lipopolysaccharide 1,3-galactosyltransferase 3924064 16981406 LY180_18685 Escherichia coli LY180 lipopolysaccharide 1,3-galactosyltransferase YP_008566783.1 3923069 R 1335916 CDS YP_008566784.1 544392065 16981407 complement(3924081..3925097) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; lipopolysaccharide 1,3-galactosyltransferase 3925097 16981407 LY180_18690 Escherichia coli LY180 lipopolysaccharide 1,3-galactosyltransferase YP_008566784.1 3924081 R 1335916 CDS YP_008566785.1 544392066 16981408 complement(3925113..3925910) 1 NC_022364.1 catalyzes the phosphorylation of heptose I in the lipopolysaccharide core; Derived by automated computational analysis using gene prediction method: Protein Homology.; lipopolysaccharide core heptose(I) kinase RfaP 3925910 16981408 LY180_18695 Escherichia coli LY180 lipopolysaccharide core heptose(I) kinase RfaP YP_008566785.1 3925113 R 1335916 CDS YP_008566786.1 544392067 16981409 complement(3925903..3927027) 1 NC_022364.1 catalyzes the addition of the first glucose residue to the LPS core; Derived by automated computational analysis using gene prediction method: Protein Homology.; glucosyltransferase 3927027 16981409 LY180_18700 Escherichia coli LY180 glucosyltransferase YP_008566786.1 3925903 R 1335916 CDS YP_008566787.1 544392068 16981410 complement(3927024..3928082) 1 NC_022364.1 catalyzes the transfer of heptose(III) to heptose(II) in the lipopolysaccharide inner core; Derived by automated computational analysis using gene prediction method: Protein Homology.; lipopolysaccharide core heptosyltransferase RfaQ 3928082 16981410 LY180_18705 Escherichia coli LY180 lipopolysaccharide core heptosyltransferase RfaQ YP_008566787.1 3927024 R 1335916 CDS YP_008566788.1 544392069 16981411 3928495..3929772 1 NC_022364.1 catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-deoxy-D-manno-octulosonic acid transferase 3929772 16981411 LY180_18710 Escherichia coli LY180 3-deoxy-D-manno-octulosonic acid transferase YP_008566788.1 3928495 D 1335916 CDS YP_008566789.1 544392070 16981412 3929780..3930259 1 NC_022364.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphopantetheine adenylyltransferase 3930259 coaD 16981412 coaD Escherichia coli LY180 phosphopantetheine adenylyltransferase YP_008566789.1 3929780 D 1335916 CDS YP_008566790.1 544392071 16981413 complement(3930298..3931107) 1 NC_022364.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; Derived by automated computational analysis using gene prediction method: Protein Homology.; 5-hydroxymethyluracil DNA glycosylase 3931107 16981413 LY180_18720 Escherichia coli LY180 5-hydroxymethyluracil DNA glycosylase YP_008566790.1 3930298 R 1335916 CDS YP_008566791.1 544392072 16981414 complement(3931205..3931372) 1 NC_022364.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L33 3931372 rpmG 16981414 rpmG Escherichia coli LY180 50S ribosomal protein L33 YP_008566791.1 3931205 R 1335916 CDS YP_008566792.1 544392073 16981415 complement(3931393..3931629) 1 NC_022364.1 required for 70S ribosome assembly; Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L28 3931629 rpmB 16981415 rpmB Escherichia coli LY180 50S ribosomal protein L28 YP_008566792.1 3931393 R 1335916 CDS YP_008566793.1 544392074 16981416 complement(3931846..3932514) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3932514 16981416 LY180_18735 Escherichia coli LY180 hypothetical protein YP_008566793.1 3931846 R 1335916 CDS YP_008566794.1 544392075 16981417 3932686..3933906 1 NC_022364.1 catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphopantothenoylcysteine decarboxylase 3933906 16981417 LY180_18740 Escherichia coli LY180 phosphopantothenoylcysteine decarboxylase YP_008566794.1 3932686 D 1335916 CDS YP_008566795.1 544392076 16981418 3933884..3934342 1 NC_022364.1 catalyzes the formation of dUMP from dUTP; Derived by automated computational analysis using gene prediction method: Protein Homology.; deoxyuridine 5'-triphosphate nucleotidohydrolase 3934342 16981418 LY180_18745 Escherichia coli LY180 deoxyuridine 5'-triphosphate nucleotidohydrolase YP_008566795.1 3933884 D 1335916 CDS YP_008566796.1 544392077 16981419 3934449..3935045 1 NC_022364.1 FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly; Derived by automated computational analysis using gene prediction method: Protein Homology.; division inhibitor protein 3935045 slmA 16981419 slmA Escherichia coli LY180 division inhibitor protein YP_008566796.1 3934449 D 1335916 CDS YP_008566797.1 544392078 16981420 complement(3935082..3935723) 1 NC_022364.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; orotate phosphoribosyltransferase 3935723 pyrE 16981420 pyrE Escherichia coli LY180 orotate phosphoribosyltransferase YP_008566797.1 3935082 R 1335916 CDS YP_008566798.1 544392079 16981421 complement(3935789..3936505) 1 NC_022364.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonuclease PH 3936505 rph 16981421 rph Escherichia coli LY180 ribonuclease PH YP_008566798.1 3935789 R 1335916 CDS YP_008566799.1 544392080 16981422 3936632..3937495 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3937495 16981422 LY180_18765 Escherichia coli LY180 hypothetical protein YP_008566799.1 3936632 D 1335916 CDS YP_008566800.1 544392081 16981423 3937716..3938540 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA damage-inducible protein D 3938540 dinD 16981423 dinD Escherichia coli LY180 DNA damage-inducible protein D YP_008566800.1 3937716 D 1335916 CDS YP_008566801.1 544392082 16981424 3938832..3939449 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3939449 16981424 LY180_18775 Escherichia coli LY180 membrane protein YP_008566801.1 3938832 D 1335916 CDS YP_008566802.1 544392083 16981425 complement(3939446..3941128) 1 NC_022364.1 this ligase is similar to LigA but it lacks the C-terminal BRCT domain; catalyzes strand joining of nicked DNA in the presence of a divalent cation and NAD+; Derived by automated computational analysis using gene prediction method: Protein Homology.; NAD-dependent DNA ligase LigB 3941128 ligB 16981425 ligB Escherichia coli LY180 NAD-dependent DNA ligase LigB YP_008566802.1 3939446 R 1335916 CDS YP_008566803.1 544392084 16981426 3941386..3942009 1 NC_022364.1 Essential for recycling GMP and indirectly, cGMP; Derived by automated computational analysis using gene prediction method: Protein Homology.; guanylate kinase 3942009 gmk 16981426 gmk Escherichia coli LY180 guanylate kinase YP_008566803.1 3941386 D 1335916 CDS YP_008566804.1 544392085 16981427 3942064..3942339 1 NC_022364.1 Promotes RNA polymerase assembly; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA-directed RNA polymerase subunit omega 3942339 rpoZ 16981427 rpoZ Escherichia coli LY180 DNA-directed RNA polymerase subunit omega YP_008566804.1 3942064 D 1335916 CDS YP_008566805.1 544392086 16981428 3942358..3944466 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase 3944466 16981428 LY180_18795 Escherichia coli LY180 bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase YP_008566805.1 3942358 D 1335916 CDS YP_008566806.1 544392087 16981429 3944473..3945162 1 NC_022364.1 specifically modifies tRNA at position G18; Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA methyltransferase 3945162 16981429 LY180_18800 Escherichia coli LY180 tRNA methyltransferase YP_008566806.1 3944473 D 1335916 CDS YP_008566807.1 544392088 16981430 3945168..3947249 1 NC_022364.1 catalyzes branch migration in Holliday junction intermediates; Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-dependent DNA helicase RecG 3947249 16981430 LY180_18805 Escherichia coli LY180 ATP-dependent DNA helicase RecG YP_008566807.1 3945168 D 1335916 CDS YP_008566808.1 544392089 16981431 complement(3947234..3948100) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3948100 16981431 LY180_18810 Escherichia coli LY180 hypothetical protein YP_008566808.1 3947234 R 1335916 CDS YP_008566809.1 544392090 16981432 complement(3948103..3949308) 1 NC_022364.1 is involved with the sodium-dependent uptake of glutamate; Derived by automated computational analysis using gene prediction method: Protein Homology.; sodium/glutamate symport carrier protein GltS 3949308 16981432 LY180_18815 Escherichia coli LY180 sodium/glutamate symport carrier protein GltS YP_008566809.1 3948103 R 1335916 CDS YP_008566810.1 544392091 16981433 3949588..3950979 1 NC_022364.1 high-affinity transporter for xanthine; Derived by automated computational analysis using gene prediction method: Protein Homology.; xanthine permease 3950979 16981433 LY180_18820 Escherichia coli LY180 xanthine permease YP_008566810.1 3949588 D 1335916 CDS YP_008566811.1 544392092 16981434 3951100..3952809 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3952809 16981434 LY180_18825 Escherichia coli LY180 hypothetical protein YP_008566811.1 3951100 D 1335916 CDS YP_008566812.1 544392093 16981435 complement(3952861..3955179) 1 NC_022364.1 catalyzes the transfer of alpha-xylosyl residue; Derived by automated computational analysis using gene prediction method: Protein Homology.; alpha-glucosidase 3955179 16981435 LY180_18830 Escherichia coli LY180 alpha-glucosidase YP_008566812.1 3952861 R 1335916 CDS YP_008566813.1 544392094 16981436 complement(3955189..3956571) 1 NC_022364.1 may be involved in the transport of galactosides-pentoses-hexuronides; Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 3956571 16981436 LY180_18835 Escherichia coli LY180 transporter YP_008566813.1 3955189 R 1335916 CDS YP_008566814.1 544392095 16981438 3957121..3958344 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; integrase 3958344 16981438 LY180_18845 Escherichia coli LY180 integrase YP_008566814.1 3957121 D 1335916 CDS YP_008566815.1 544393198 16981439 complement(3958440..3960065) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; DNA helicase UvrD 3960065 16981439 LY180_18850 Escherichia coli LY180 DNA helicase UvrD YP_008566815.1 3958440 R 1335916 CDS YP_008566816.1 544393199 16981440 complement(3960067..3961767) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; chromosome segregation protein SMC 3961767 16981440 LY180_18855 Escherichia coli LY180 chromosome segregation protein SMC YP_008566816.1 3960067 R 1335916 CDS YP_008566817.1 544393200 16981441 complement(3962175..3962558) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3962558 16981441 LY180_18860 Escherichia coli LY180 hypothetical protein YP_008566817.1 3962175 R 1335916 CDS YP_008566818.1 544393201 16981442 complement(3963303..3963803) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3963803 16981442 LY180_18865 Escherichia coli LY180 hypothetical protein YP_008566818.1 3963303 R 1335916 CDS YP_008566819.1 544393202 16981443 3963910..3965118 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3965118 16981443 LY180_18870 Escherichia coli LY180 hypothetical protein YP_008566819.1 3963910 D 1335916 CDS YP_008566820.1 544393203 16981444 complement(3965097..3965672) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3965672 16981444 LY180_18875 Escherichia coli LY180 hypothetical protein YP_008566820.1 3965097 R 1335916 CDS YP_008566821.1 544393204 16981445 complement(3966008..3966211) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; Rha family transcriptional regulator 3966211 16981445 LY180_18880 Escherichia coli LY180 Rha family transcriptional regulator YP_008566821.1 3966008 R 1335916 CDS YP_008566822.1 544393205 16981446 3966592..3967740 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3967740 16981446 LY180_18885 Escherichia coli LY180 hypothetical protein YP_008566822.1 3966592 D 1335916 CDS YP_008566823.1 544393206 16981447 3968143..3968436 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3968436 16981447 LY180_18890 Escherichia coli LY180 hypothetical protein YP_008566823.1 3968143 D 1335916 CDS YP_008566824.1 544392096 16981448 complement(3968464..3969330) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transposase 3969330 16981448 LY180_18895 Escherichia coli LY180 transposase YP_008566824.1 3968464 R 1335916 CDS YP_008566825.1 544393207 16981449 complement(3969327..3969626) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase IS3 3969626 16981449 LY180_18900 Escherichia coli LY180 transposase IS3 YP_008566825.1 3969327 R 1335916 CDS YP_008566826.1 544393208 16981450 3969858..3970661 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3970661 16981450 LY180_18905 Escherichia coli LY180 hypothetical protein YP_008566826.1 3969858 D 1335916 CDS YP_008566827.1 544393209 16981451 3970878..3971354 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3971354 16981451 LY180_18910 Escherichia coli LY180 hypothetical protein YP_008566827.1 3970878 D 1335916 CDS YP_008566828.1 544392097 16981452 3971426..3972247 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3972247 16981452 LY180_18915 Escherichia coli LY180 hypothetical protein YP_008566828.1 3971426 D 1335916 CDS YP_008566829.1 544392098 16981453 3972317..3972787 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3972787 16981453 LY180_18920 Escherichia coli LY180 hypothetical protein YP_008566829.1 3972317 D 1335916 CDS YP_008566830.1 544392099 16981454 3972796..3973017 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3973017 16981454 LY180_18925 Escherichia coli LY180 hypothetical protein YP_008566830.1 3972796 D 1335916 CDS YP_008566831.1 544392100 16981455 3973049..3973414 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; antitoxin 3973414 16981455 LY180_18930 Escherichia coli LY180 antitoxin YP_008566831.1 3973049 D 1335916 CDS YP_008566832.1 544392101 16981456 3973448..3973768 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; toxin 3973768 16981456 LY180_18935 Escherichia coli LY180 toxin YP_008566832.1 3973448 D 1335916 CDS YP_008566833.1 544392102 16981457 3974535..3975719 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar transporter 3975719 16981457 LY180_18940 Escherichia coli LY180 sugar transporter YP_008566833.1 3974535 D 1335916 CDS YP_008566834.1 544392103 16981458 3975830..3976753 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3976753 16981458 LY180_18945 Escherichia coli LY180 membrane protein YP_008566834.1 3975830 D 1335916 CDS YP_008566835.1 544393210 16981459 complement(3976757..3977038) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transporter 3977038 16981459 LY180_18950 Escherichia coli LY180 transporter YP_008566835.1 3976757 R 1335916 CDS YP_008566836.1 544393211 16981460 complement(3977035..3978243) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3978243 16981460 LY180_18955 Escherichia coli LY180 hypothetical protein YP_008566836.1 3977035 R 1335916 CDS YP_008566837.1 544392104 16981461 complement(3978347..3978913) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; methionine ABC transporter substrate-binding protein 3978913 metQ 16981461 metQ Escherichia coli LY180 methionine ABC transporter substrate-binding protein YP_008566837.1 3978347 R 1335916 CDS YP_008566838.1 544393212 16981462 3979011..3979130 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3979130 16981462 LY180_18965 Escherichia coli LY180 hypothetical protein YP_008566838.1 3979011 D 1335916 CDS YP_008566839.1 544392105 16981463 3979135..3979428 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3979428 16981463 LY180_18970 Escherichia coli LY180 hypothetical protein YP_008566839.1 3979135 D 1335916 CDS YP_008566840.1 544392106 16981464 complement(3979469..3980824) 1 NC_022364.1 experimental results in Escherichia coli suggest that this gene encodes an inosine export protein; member of major facilitator superfamily; MFS; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonucleoside transporter 3980824 nepI 16981464 nepI Escherichia coli LY180 ribonucleoside transporter YP_008566840.1 3979469 R 1335916 CDS YP_008566841.1 544392107 16981465 complement(3980870..3981322) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3981322 16981465 LY180_18980 Escherichia coli LY180 hypothetical protein YP_008566841.1 3980870 R 1335916 CDS YP_008566842.1 544392108 16981466 complement(3981375..3982721) 1 NC_022364.1 involved in the transport or adenine; Derived by automated computational analysis using gene prediction method: Protein Homology.; adenine permease 3982721 16981466 LY180_18985 Escherichia coli LY180 adenine permease YP_008566842.1 3981375 R 1335916 CDS YP_008566843.1 544392109 16981467 3982884..3984650 1 NC_022364.1 catalyzes the formation of hypoxanthine from adenine; in E. coli this activity has been detected in mutant strains but not in wild type; Derived by automated computational analysis using gene prediction method: Protein Homology.; adenine deaminase 3984650 16981467 LY180_18990 Escherichia coli LY180 adenine deaminase YP_008566843.1 3982884 D 1335916 CDS YP_008566844.1 544392110 16981468 complement(3984695..3986086) 1 NC_022364.1 cytoplasmic membrane protein that functions as a monomer; catalyzes the active transport of sugar-phosphates such as glucose-6-phosphate with the obligatory exchange of inorganic phosphate or organophosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; antiporter 3986086 uhpT 16981468 uhpT Escherichia coli LY180 antiporter YP_008566844.1 3984695 R 1335916 CDS YP_008566845.1 544392111 16981469 complement(3986224..3987543) 1 NC_022364.1 membrane protein regulates uhpT expression; Derived by automated computational analysis using gene prediction method: Protein Homology.; regulatory protein 3987543 16981469 LY180_19000 Escherichia coli LY180 regulatory protein YP_008566845.1 3986224 R 1335916 CDS YP_008566846.1 544392112 16981470 complement(3987553..3989055) 1 NC_022364.1 Member of the two-component regulatory system UhpB/UhpA involved in the regulation of the uptake of hexose ph; Derived by automated computational analysis using gene prediction method: Protein Homology.; sensory histidine kinase 3989055 16981470 LY180_19005 Escherichia coli LY180 sensory histidine kinase YP_008566846.1 3987553 R 1335916 CDS YP_008566847.1 544392113 16981471 complement(3989055..3989645) 1 NC_022364.1 response regulator in two-component regulatory system wtih UhpB; phosphorylated UhpA is a positive activator uhpT, a hexose phosphates transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 3989645 16981471 LY180_19010 Escherichia coli LY180 transcriptional regulator YP_008566847.1 3989055 R 1335916 CDS YP_008566848.1 544392114 16981472 complement(3989720..3990010) 1 NC_022364.1 with IlvB catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.; acetolactate synthase 3990010 16981472 LY180_19015 Escherichia coli LY180 acetolactate synthase YP_008566848.1 3989720 R 1335916 CDS YP_008566849.1 544392115 16981473 complement(3990014..3991702) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acetolactate synthase 3991702 16981473 LY180_19020 Escherichia coli LY180 acetolactate synthase YP_008566849.1 3990014 R 1335916 CDS YP_008566850.1 544393213 16981474 3991893..3992183 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3992183 16981474 LY180_19025 Escherichia coli LY180 hypothetical protein YP_008566850.1 3991893 D 1335916 CDS YP_008566851.1 544393214 16981475 3992471..3992560 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; toxic peptide TisB 3992560 16981475 LY180_19030 Escherichia coli LY180 toxic peptide TisB YP_008566851.1 3992471 D 1335916 CDS YP_008566852.1 544392116 16981476 3992979..3994163 1 NC_022364.1 multidrug efflux protein involved in adaptation to low energy shock; Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug resistance protein D 3994163 emrD 16981476 emrD Escherichia coli LY180 multidrug resistance protein D YP_008566852.1 3992979 D 1335916 CDS YP_008566853.1 544392117 16981477 complement(3994171..3994668) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3994668 16981477 LY180_19040 Escherichia coli LY180 hypothetical protein YP_008566853.1 3994171 R 1335916 CDS YP_008566854.1 544392118 16981478 complement(3994665..3995027) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3995027 16981478 LY180_19045 Escherichia coli LY180 membrane protein YP_008566854.1 3994665 R 1335916 CDS YP_008566855.1 544392119 16981479 complement(3995017..3995364) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3995364 16981479 LY180_19050 Escherichia coli LY180 membrane protein YP_008566855.1 3995017 R 1335916 CDS YP_008566856.1 544392120 16981480 3995474..3995923 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3995923 16981480 LY180_19055 Escherichia coli LY180 membrane protein YP_008566856.1 3995474 D 1335916 CDS YP_008566857.1 544392121 16981481 complement(3995970..3997463) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3997463 16981481 LY180_19060 Escherichia coli LY180 hypothetical protein YP_008566857.1 3995970 R 1335916 CDS YP_008566858.1 544392122 16981482 complement(3997460..3999175) 1 NC_022364.1 uncharacterized member of the SSS superfamily of sodium-dependent solute transporters; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.; AraC family transcriptional regulator 3999175 16981482 LY180_19065 Escherichia coli LY180 AraC family transcriptional regulator YP_008566858.1 3997460 R 1335916 CDS YP_008566859.1 544392123 16981483 3999342..4000235 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; AraC family transcriptional regulator 4000235 16981483 LY180_19070 Escherichia coli LY180 AraC family transcriptional regulator YP_008566859.1 3999342 D 1335916 CDS YP_008566860.1 544392124 16982294 complement(4001046..4002662) 1 NC_022364.1 involved in the phosphorylation and transport of sugars across the cell membrane; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS alpha-glucoside transporter subunit IIBC 4002662 16982294 LY180_19075 Escherichia coli LY180 PTS alpha-glucoside transporter subunit IIBC YP_008566860.1 4001046 R 1335916 CDS YP_008566861.1 544392125 16981485 4002958..4003674 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; GntR family transcriptional regulator 4003674 16981485 LY180_19080 Escherichia coli LY180 GntR family transcriptional regulator YP_008566861.1 4002958 D 1335916 CDS YP_008566862.1 544392126 16981486 complement(4003671..4005332) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 4005332 16981486 LY180_19085 Escherichia coli LY180 transporter YP_008566862.1 4003671 R 1335916 CDS YP_008566863.1 544393215 16981487 4005375..4005524 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; peptide ABC transporter ATP-binding protein 4005524 16981487 LY180_19090 Escherichia coli LY180 peptide ABC transporter ATP-binding protein YP_008566863.1 4005375 D 1335916 CDS YP_008566864.1 544392127 16981488 complement(4005529..4005957) 1 NC_022364.1 16 kDa heat shock protein B; associates with aggregated proteins, together with ibpA, to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress; ATP-independent; Derived by automated computational analysis using gene prediction method: Protein Homology.; heat shock chaperone IbpB 4005957 16981488 LY180_19095 Escherichia coli LY180 heat shock chaperone IbpB YP_008566864.1 4005529 R 1335916 CDS YP_008566865.1 544392128 16981489 complement(4006069..4006482) 1 NC_022364.1 with IbpB associates with aggregated proteins to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress; Derived by automated computational analysis using gene prediction method: Protein Homology.; heat shock protein IbpA 4006482 16981489 LY180_19100 Escherichia coli LY180 heat shock protein IbpA YP_008566865.1 4006069 R 1335916 CDS YP_008566866.1 544392129 16981490 4006788..4007120 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4007120 16981490 LY180_19105 Escherichia coli LY180 membrane protein YP_008566866.1 4006788 D 1335916 CDS YP_008566867.1 544392130 16981491 complement(4007122..4008369) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4008369 16981491 LY180_19110 Escherichia coli LY180 hypothetical protein YP_008566867.1 4007122 R 1335916 CDS YP_008566868.1 544392131 16981492 4008419..4009501 1 NC_022364.1 FAD/NAD(P)-binding domain; Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase 4009501 16981492 LY180_19115 Escherichia coli LY180 oxidoreductase YP_008566868.1 4008419 D 1335916 CDS YP_008566869.1 544392132 16981493 complement(4009498..4010790) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glucarate transporter 4010790 16981493 LY180_19120 Escherichia coli LY180 glucarate transporter YP_008566869.1 4009498 R 1335916 CDS YP_008566870.1 544392133 16981494 complement(4010910..4012058) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; galactonate dehydratase 4012058 16981494 LY180_19125 Escherichia coli LY180 galactonate dehydratase YP_008566870.1 4010910 R 1335916 CDS YP_008566871.1 544392134 16981495 complement(4012055..4012672) 1 NC_022364.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 4012672 16981495 LY180_19130 Escherichia coli LY180 2-dehydro-3-deoxy-6-phosphogalactonate aldolase YP_008566871.1 4012055 R 1335916 CDS YP_008566872.1 544392135 16981496 complement(4012656..4013534) 1 NC_022364.1 catalyzes the formation of 2-dehydro-3-deoxy-D-galactonate 6-phosphate from 2-dehydro-3-deoxy-D-galactonate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-oxo-3-deoxygalactonate kinase 4013534 16981496 LY180_19135 Escherichia coli LY180 2-oxo-3-deoxygalactonate kinase YP_008566872.1 4012656 R 1335916 CDS YP_008566873.1 544392136 16981497 complement(4013531..4014220) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; galactonate operon transcriptional repressor 4014220 16981497 LY180_19140 Escherichia coli LY180 galactonate operon transcriptional repressor YP_008566873.1 4013531 R 1335916 CDS YP_008566874.1 544392137 16981498 4014498..4015154 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4015154 16981498 LY180_19145 Escherichia coli LY180 hypothetical protein YP_008566874.1 4014498 D 1335916 CDS YP_008566875.1 544392138 16981499 complement(4015200..4016012) 1 NC_022364.1 YidA; catalyzes the dephosphorylation of erythrose 4-phosphate (preferred substrate), mannose 1-phosphate and p-nitrophenyl phosphate; hydrolyzes the alpha-D-glucose-1-phosphate but not the beta form; member of the haloacid dehalogenase-like hydrolases superfamily and Cof family of proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar phosphate phosphatase 4016012 16981499 LY180_19150 Escherichia coli LY180 sugar phosphate phosphatase YP_008566875.1 4015200 R 1335916 CDS YP_008566876.1 544392139 16981500 complement(4016127..4016525) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4016525 16981500 LY180_19155 Escherichia coli LY180 hypothetical protein YP_008566876.1 4016127 R 1335916 CDS YP_008566877.1 544392140 16981501 complement(4016659..4016745) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4016745 16981501 LY180_19160 Escherichia coli LY180 hypothetical protein YP_008566877.1 4016659 R 1335916 CDS YP_008566878.1 544392141 16981502 complement(4016765..4019179) 1 NC_022364.1 negatively supercoils closed circular double-stranded DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA gyrase subunit B 4019179 gyrB 16981502 gyrB Escherichia coli LY180 DNA gyrase subunit B YP_008566878.1 4016765 R 1335916 CDS YP_008566879.1 544392142 16981503 complement(4019208..4020281) 1 NC_022364.1 Required for DNA replication; binds preferentially to single-stranded, linear DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; recombinase F 4020281 recF 16981503 recF Escherichia coli LY180 recombinase F YP_008566879.1 4019208 R 1335916 CDS YP_008566880.1 544392143 16981504 complement(4020281..4021381) 1 NC_022364.1 binds the polymerase to DNA and acts as a sliding clamp; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA polymerase III subunit beta 4021381 16981504 LY180_19175 Escherichia coli LY180 DNA polymerase III subunit beta YP_008566880.1 4020281 R 1335916 CDS YP_008566881.1 544392144 16981505 complement(4021386..4022789) 1 NC_022364.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself; Derived by automated computational analysis using gene prediction method: Protein Homology.; chromosomal replication initiation protein 4022789 dnaA 16981505 dnaA Escherichia coli LY180 chromosomal replication initiation protein YP_008566881.1 4021386 R 1335916 CDS YP_008566882.1 544392145 16981506 4023396..4023536 1 NC_022364.1 in Escherichia coli transcription of this gene is enhanced by polyamines; Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L34 4023536 rpmH 16981506 rpmH Escherichia coli LY180 50S ribosomal protein L34 YP_008566882.1 4023396 D 1335916 CDS YP_008566883.1 544392146 16981507 4023553..4023912 1 NC_022364.1 protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonuclease P 4023912 rnpA 16981507 rnpA Escherichia coli LY180 ribonuclease P YP_008566883.1 4023553 D 1335916 CDS YP_008566884.1 544392147 16981508 4024136..4025782 1 NC_022364.1 functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein insertase 4025782 16981508 LY180_19195 Escherichia coli LY180 membrane protein insertase YP_008566884.1 4024136 D 1335916 CDS YP_008566885.1 544392148 16981509 4025888..4027252 1 NC_022364.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA modification GTPase TrmE 4027252 trmE 16981509 trmE Escherichia coli LY180 tRNA modification GTPase TrmE YP_008566885.1 4025888 D 1335916 CDS YP_008566886.1 544392149 16981510 4027790..4029205 1 NC_022364.1 tryptophan indole-lyase; catalyzes the formation of indole and pyruvate from tryptophan; also has xysteine desulfhydrase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.; L-cysteine desulfhydrase 4029205 tnaA 16981510 tnaA Escherichia coli LY180 L-cysteine desulfhydrase YP_008566886.1 4027790 D 1335916 CDS YP_008566887.1 544392150 16981511 4029296..4030543 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tryptophan permease 4030543 16981511 LY180_19210 Escherichia coli LY180 tryptophan permease YP_008566887.1 4029296 D 1335916 CDS YP_008566888.1 544392151 16981512 4030675..4031850 1 NC_022364.1 Confers resistance to chloramphenicol; Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug transporter 4031850 16981512 LY180_19215 Escherichia coli LY180 multidrug transporter YP_008566888.1 4030675 D 1335916 CDS YP_008566889.1 544392152 16981513 4031825..4032784 1 NC_022364.1 Involved in anaerobic NO protection; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4032784 16981513 LY180_19220 Escherichia coli LY180 transcriptional regulator YP_008566889.1 4031825 D 1335916 CDS YP_008566890.1 544392153 16981514 4032941..4033690 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4033690 16981514 LY180_19225 Escherichia coli LY180 hypothetical protein YP_008566890.1 4032941 D 1335916 CDS YP_008566891.1 544392154 16981515 4033712..4034278 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4034278 16981515 LY180_19230 Escherichia coli LY180 hypothetical protein YP_008566891.1 4033712 D 1335916 CDS YP_008566892.1 544392155 16981516 complement(4034332..4035669) 1 NC_022364.1 involved in the transport or adenine; Derived by automated computational analysis using gene prediction method: Protein Homology.; adenine permease 4035669 16981516 LY180_19235 Escherichia coli LY180 adenine permease YP_008566892.1 4034332 R 1335916 CDS YP_008566893.1 544392156 16981517 4035836..4036501 1 NC_022364.1 YieH; catalyzes the dephosphorylation of phosphoenolpyruvate, AMP and p-nitrophenyl phosphate; purine and pyrimidine nucleotides are secondary substrates; member of the haloacid dehalogenase-like hydrolases superfamily; Derived by automated computational analysis using gene prediction method: Protein Homology.; 6-phosphogluconate phosphatase 4036501 16981517 LY180_19240 Escherichia coli LY180 6-phosphogluconate phosphatase YP_008566893.1 4035836 D 1335916 CDS YP_008566894.1 544392157 16981518 4036568..4037041 1 NC_022364.1 might be involved in hypersensitivity to nitrofurzone; Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4037041 16981518 LY180_19245 Escherichia coli LY180 membrane protein YP_008566894.1 4036568 D 1335916 CDS YP_008566895.1 544392158 16981519 4037090..4037677 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4037677 16981519 LY180_19250 Escherichia coli LY180 hypothetical protein YP_008566895.1 4037090 D 1335916 CDS YP_008566896.1 544392159 16981520 complement(4037739..4038461) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 6-phosphogluconolactonase 4038461 16981520 LY180_19255 Escherichia coli LY180 6-phosphogluconolactonase YP_008566896.1 4037739 R 1335916 CDS YP_008566897.1 544392160 16981521 complement(4038476..4039645) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4039645 16981521 LY180_19260 Escherichia coli LY180 hypothetical protein YP_008566897.1 4038476 R 1335916 CDS YP_008566898.1 544392161 16981522 complement(4039672..4041288) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; porin 4041288 16981522 LY180_19265 Escherichia coli LY180 porin YP_008566898.1 4039672 R 1335916 CDS YP_008566899.1 544392162 16981523 complement(4041374..4042768) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 6-phospho-beta-glucosidase 4042768 16981523 LY180_19270 Escherichia coli LY180 6-phospho-beta-glucosidase YP_008566899.1 4041374 R 1335916 CDS YP_008566900.1 544392163 16981524 complement(4042787..4044601) 1 NC_022364.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS glucose transporter subunit IIA 4044601 16981524 LY180_19275 Escherichia coli LY180 PTS glucose transporter subunit IIA YP_008566900.1 4042787 R 1335916 CDS YP_008566901.1 544392164 16981525 complement(4044798..4045634) 1 NC_022364.1 positive regulator of the beta-glucoside operon; transcriptional antiterminator; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcription antitermination protein BlgG 4045634 16981525 LY180_19280 Escherichia coli LY180 transcription antitermination protein BlgG YP_008566901.1 4044798 R 1335916 CDS YP_008566902.1 544392165 16981526 complement(4045920..4046645) 1 NC_022364.1 regulates several genes involved in high affinity phosphate uptake; under conditions of high phosphate concentrations downregulates the PHO regulon; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4046645 16981526 LY180_19285 Escherichia coli LY180 transcriptional regulator YP_008566902.1 4045920 R 1335916 CDS YP_008566903.1 544393216 16981527 complement(4046660..4047433) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; phosphate ABC transporter ATP-binding protein 4047433 16981527 LY180_19290 Escherichia coli LY180 phosphate ABC transporter ATP-binding protein YP_008566903.1 4046660 R 1335916 CDS YP_008566904.1 544392166 16981528 complement(4047524..4048414) 1 NC_022364.1 Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphate transporter permease subunit PtsA 4048414 pstA 16981528 pstA Escherichia coli LY180 phosphate transporter permease subunit PtsA YP_008566904.1 4047524 R 1335916 CDS YP_008566905.1 544392167 16981529 complement(4048414..4049373) 1 NC_022364.1 part of the ATP-dependent phosphate uptake system PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphate transporter permease subunit PstC 4049373 pstC 16981529 pstC Escherichia coli LY180 phosphate transporter permease subunit PstC YP_008566905.1 4048414 R 1335916 CDS YP_008566906.1 544392168 16981530 complement(4049460..4050500) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphate ABC transporter substrate-binding protein 4050500 16981530 LY180_19305 Escherichia coli LY180 phosphate ABC transporter substrate-binding protein YP_008566906.1 4049460 R 1335916 CDS YP_008566907.1 544392169 16981531 complement(4050748..4051821) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein 4051821 16981531 LY180_19310 Escherichia coli LY180 fimbrial protein YP_008566907.1 4050748 R 1335916 CDS YP_008566908.1 544392170 16981532 complement(4051832..4054354) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein FimD 4054354 16981532 LY180_19315 Escherichia coli LY180 fimbrial protein FimD YP_008566908.1 4051832 R 1335916 CDS YP_008566909.1 544392171 16981533 complement(4055158..4055730) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein 4055730 lpfA 16981533 lpfA Escherichia coli LY180 fimbrial protein YP_008566909.1 4055158 R 1335916 CDS YP_008566910.1 544392172 16981534 complement(4056032..4057861) 1 NC_022364.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; Derived by automated computational analysis using gene prediction method: Protein Homology.; glucosamine--fructose-6-phosphate aminotransferase 4057861 16981534 LY180_19335 Escherichia coli LY180 glucosamine--fructose-6-phosphate aminotransferase YP_008566910.1 4056032 R 1335916 CDS YP_008566911.1 544392173 16981535 complement(4058023..4059393) 1 NC_022364.1 forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 4059393 glmU 16981535 glmU Escherichia coli LY180 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase YP_008566911.1 4058023 R 1335916 CDS YP_008566912.1 544393217 16981536 complement(4059448..4059534) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4059534 16981536 LY180_19345 Escherichia coli LY180 hypothetical protein YP_008566912.1 4059448 R 1335916 CDS YP_008566913.1 544392174 16981537 complement(4059744..4060163) 1 NC_022364.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; F0F1 ATP synthase subunit epsilon 4060163 atpC 16981537 atpC Escherichia coli LY180 F0F1 ATP synthase subunit epsilon YP_008566913.1 4059744 R 1335916 CDS YP_008566914.1 544392175 16981538 complement(4060184..4061566) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; F0F1 ATP synthase subunit beta 4061566 16981538 LY180_19355 Escherichia coli LY180 F0F1 ATP synthase subunit beta YP_008566914.1 4060184 R 1335916 CDS YP_008566915.1 544392176 16981539 complement(4061593..4062456) 1 NC_022364.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.; F0F1 ATP synthase subunit gamma 4062456 16981539 LY180_19360 Escherichia coli LY180 F0F1 ATP synthase subunit gamma YP_008566915.1 4061593 R 1335916 CDS YP_008566916.1 544392177 16981540 complement(4062507..4064048) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; F0F1 ATP synthase subunit alpha 4064048 16981540 LY180_19365 Escherichia coli LY180 F0F1 ATP synthase subunit alpha YP_008566916.1 4062507 R 1335916 CDS YP_008566917.1 544392178 16981541 complement(4064061..4064594) 1 NC_022364.1 Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; Derived by automated computational analysis using gene prediction method: Protein Homology.; F0F1 ATP synthase subunit delta 4064594 16981541 LY180_19370 Escherichia coli LY180 F0F1 ATP synthase subunit delta YP_008566917.1 4064061 R 1335916 CDS YP_008566918.1 544392179 16981542 complement(4064609..4065079) 1 NC_022364.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel; Derived by automated computational analysis using gene prediction method: Protein Homology.; F0F1 ATP synthase subunit B 4065079 16981542 LY180_19375 Escherichia coli LY180 F0F1 ATP synthase subunit B YP_008566918.1 4064609 R 1335916 CDS YP_008566919.1 544392180 16981543 complement(4065141..4065380) 1 NC_022364.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; Derived by automated computational analysis using gene prediction method: Protein Homology.; F0F1 ATP synthase subunit C 4065380 16981543 LY180_19380 Escherichia coli LY180 F0F1 ATP synthase subunit C YP_008566919.1 4065141 R 1335916 CDS YP_008566920.1 544392181 16981544 complement(4065427..4066242) 1 NC_022364.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; Derived by automated computational analysis using gene prediction method: Protein Homology.; F0F1 ATP synthase subunit A 4066242 16981544 LY180_19385 Escherichia coli LY180 F0F1 ATP synthase subunit A YP_008566920.1 4065427 R 1335916 CDS YP_008566921.1 544392182 16981545 complement(4066251..4066631) 1 NC_022364.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I associates with the membrane and may be involved with cation translocation; Derived by automated computational analysis using gene prediction method: Protein Homology.; F0F1 ATP synthase subunit I 4066631 16981545 LY180_19390 Escherichia coli LY180 F0F1 ATP synthase subunit I YP_008566921.1 4066251 R 1335916 CDS YP_008566922.1 544392183 16981546 complement(4067248..4067871) 1 NC_022364.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; 16S rRNA methyltransferase 4067871 gidB 16981546 gidB Escherichia coli LY180 16S rRNA methyltransferase YP_008566922.1 4067248 R 1335916 CDS YP_008566923.1 544392184 16981547 complement(4067935..4069824) 1 NC_022364.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA uridine 5-carboxymethylaminomethyl modification protein 4069824 gidA 16981547 gidA Escherichia coli LY180 tRNA uridine 5-carboxymethylaminomethyl modification protein YP_008566923.1 4067935 R 1335916 CDS YP_008566924.1 544392185 16981548 complement(4070203..4070646) 1 NC_022364.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; Derived by automated computational analysis using gene prediction method: Protein Homology.; FMN-binding protein MioC 4070646 16981548 LY180_19405 Escherichia coli LY180 FMN-binding protein MioC YP_008566924.1 4070203 R 1335916 CDS YP_008566925.1 544392186 16981549 complement(4070736..4071194) 1 NC_022364.1 transcriptional repressor of asnA which codes for aspartate-ammonia ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4071194 16981549 LY180_19410 Escherichia coli LY180 transcriptional regulator YP_008566925.1 4070736 R 1335916 CDS YP_008566926.1 544392187 16981550 4071346..4072338 1 NC_022364.1 catalyzes the formation of asparagine from aspartate and ammonia; Derived by automated computational analysis using gene prediction method: Protein Homology.; asparagine synthetase AsnA 4072338 16981550 LY180_19415 Escherichia coli LY180 asparagine synthetase AsnA YP_008566926.1 4071346 D 1335916 CDS YP_008566927.1 544392188 16981551 complement(4072343..4073794) 1 NC_022364.1 contains a von Willibrand factor type A domain; stimulates the ATPase activity of RavA; Derived by automated computational analysis using gene prediction method: Protein Homology.; protoheme IX farnesyltransferase 4073794 yieM 16981551 yieM Escherichia coli LY180 protoheme IX farnesyltransferase YP_008566927.1 4072343 R 1335916 CDS YP_008566928.1 544392189 16981552 complement(4073788..4075284) 1 NC_022364.1 interacts with LdcI, lysine decarboxylase; may be active in late log/ early stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology.; regulatory ATPase RavA 4075284 16981552 LY180_19425 Escherichia coli LY180 regulatory ATPase RavA YP_008566928.1 4073788 R 1335916 CDS YP_008566929.1 544392190 16981553 4075507..4077375 1 NC_022364.1 Responsible for the low-affinity transport of potassium into the cell; involved in potassium ion uptake under hyper-osmotic stress at a low pH; Derived by automated computational analysis using gene prediction method: Protein Homology.; potassium transporter Kup 4077375 trkD 16981553 trkD Escherichia coli LY180 potassium transporter Kup YP_008566929.1 4075507 D 1335916 CDS YP_008566930.1 544392191 16981554 4077542..4077961 1 NC_022364.1 cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose; RbsD is required for efficient ribose utilization in E. coli; rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source; Derived by automated computational analysis using gene prediction method: Protein Homology.; D-ribose pyranase 4077961 16981554 LY180_19435 Escherichia coli LY180 D-ribose pyranase YP_008566930.1 4077542 D 1335916 CDS YP_008566931.1 544392192 16981555 4077969..4079474 1 NC_022364.1 with RbsBCD acts to import ribose into the cell; RbsA contains 2 ATP-binding domain; Derived by automated computational analysis using gene prediction method: Protein Homology.; D-ribose transporter ATP binding protein 4079474 16981555 LY180_19440 Escherichia coli LY180 D-ribose transporter ATP binding protein YP_008566931.1 4077969 D 1335916 CDS YP_008566932.1 544393218 16981556 4079479..4079814 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; ABC transporter permease 4079814 16981556 LY180_19445 Escherichia coli LY180 ABC transporter permease YP_008566932.1 4079479 D 1335916 CDS YP_008566933.1 544392193 16981557 4079765..4080412 1 NC_022364.1 binds to the purF operator and coregulates other genes for de novo purine nucleotide synthesis; is involved in regulation of purB, purC, purEK, purHD, purL, purMN and guaBA expression; binds hypoxanthine and guanine as inducers; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4080412 16981557 LY180_19450 Escherichia coli LY180 transcriptional regulator YP_008566933.1 4079765 D 1335916 CDS YP_008566934.1 544392194 16981558 complement(4080378..4081805) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 4081805 16981558 LY180_19455 Escherichia coli LY180 transporter YP_008566934.1 4080378 R 1335916 CDS YP_008566935.1 544392195 16981559 complement(4081828..4082520) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; GntR family transcriptional regulator 4082520 16981559 LY180_19460 Escherichia coli LY180 GntR family transcriptional regulator YP_008566935.1 4081828 R 1335916 CDS YP_008566936.1 544392196 16981566 complement(4088321..4089160) 1 NC_022364.1 Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4089160 16981566 LY180_19495 Escherichia coli LY180 transcriptional regulator YP_008566936.1 4088321 R 1335916 CDS YP_008566937.1 544392197 16981567 4089279..4089617 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4089617 16981567 LY180_19500 Escherichia coli LY180 hypothetical protein YP_008566937.1 4089279 D 1335916 CDS YP_008566938.1 544392198 16981568 complement(4089642..4091162) 1 NC_022364.1 among the AAA+ ATPases, the YifB protease family belongs to the Helix 2 insert clade; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-dependent protease 4091162 16981568 LY180_19505 Escherichia coli LY180 ATP-dependent protease YP_008566938.1 4089642 R 1335916 CDS YP_008566939.1 544393219 16981569 4091317..4091406 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4091406 16981569 LY180_19510 Escherichia coli LY180 hypothetical protein YP_008566939.1 4091317 D 1335916 CDS YP_008566940.1 544392199 16981570 4091753..4093399 1 NC_022364.1 catalyzes the formation of 2-acetolactate from pyruvate; also known as acetolactate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.; acetolactate synthase 4093399 16981570 LY180_19515 Escherichia coli LY180 acetolactate synthase YP_008566940.1 4091753 D 1335916 CDS YP_008566941.1 544392200 16981571 4093396..4093659 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acetolactate synthase 4093659 ilvM 16981571 ilvM Escherichia coli LY180 acetolactate synthase YP_008566941.1 4093396 D 1335916 CDS YP_008566942.1 544392201 16981572 4093679..4094608 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; branched-chain amino acid aminotransferase 4094608 16981572 LY180_19525 Escherichia coli LY180 branched-chain amino acid aminotransferase YP_008566942.1 4093679 D 1335916 CDS YP_008566943.1 544392202 16981573 4094673..4096523 1 NC_022364.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; dihydroxy-acid dehydratase 4096523 16981573 LY180_19530 Escherichia coli LY180 dihydroxy-acid dehydratase YP_008566943.1 4094673 D 1335916 CDS YP_008566944.1 544392203 16981574 4096526..4098070 1 NC_022364.1 threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.; threonine dehydratase 4098070 16981574 LY180_19535 Escherichia coli LY180 threonine dehydratase YP_008566944.1 4096526 D 1335916 CDS YP_008566945.1 544392204 16981575 complement(4098122..4099015) 1 NC_022364.1 participates in controlling several genes involved in isoleucine and valine biosynthesis; activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4099015 16981575 LY180_19540 Escherichia coli LY180 transcriptional regulator YP_008566945.1 4098122 R 1335916 CDS YP_008566946.1 544392205 16981576 4099165..4100640 1 NC_022364.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; ketol-acid reductoisomerase 4100640 16981576 LY180_19545 Escherichia coli LY180 ketol-acid reductoisomerase YP_008566946.1 4099165 D 1335916 CDS YP_008566947.1 544392206 16981577 complement(4100727..4101008) 1 NC_022364.1 rotamase C; accelerates isomerization of the peptidyl prolyl bond; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidyl-prolyl cis-trans isomerase 4101008 16981577 LY180_19550 Escherichia coli LY180 peptidyl-prolyl cis-trans isomerase YP_008566947.1 4100727 R 1335916 CDS YP_008566948.1 544392207 16981578 complement(4101207..4101656) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4101656 16981578 LY180_19555 Escherichia coli LY180 hypothetical protein YP_008566948.1 4101207 R 1335916 CDS YP_008566949.1 544392208 16981579 4101873..4103894 1 NC_022364.1 single-stranded DNA-dependent ATPase; initiates unwinding at a nick in the DNA; involved in DNA replication; Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-dependent DNA helicase Rep 4103894 16981579 LY180_19560 Escherichia coli LY180 ATP-dependent DNA helicase Rep YP_008566949.1 4101873 D 1335916 CDS YP_008566950.1 544392209 16981580 complement(4103941..4105425) 1 NC_022364.1 catalyzes the conversion of guanosine 5'-triphosphate,3'-diphosphate (pppGpp) to guanosine 5'-diphosphate,3'-diphosphate (ppGpp); pppGpp and ppGpp control the stringent response during amino acid starvation; Derived by automated computational analysis using gene prediction method: Protein Homology.; guanosine pentaphosphate phosphohydrolase 4105425 16981580 LY180_19565 Escherichia coli LY180 guanosine pentaphosphate phosphohydrolase YP_008566950.1 4103941 R 1335916 CDS YP_008566951.1 544392210 16981581 complement(4105559..4106824) 1 NC_022364.1 enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.; RNA helicase 4106824 16981581 LY180_19570 Escherichia coli LY180 RNA helicase YP_008566951.1 4105559 R 1335916 CDS YP_008566952.1 544392211 16981582 4106955..4107284 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; thioredoxin 4107284 trxA 16981582 trxA Escherichia coli LY180 thioredoxin YP_008566952.1 4106955 D 1335916 CDS YP_008566953.1 544392212 16981583 4107425..4107526 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; rho operon leader peptide 4107526 16981583 LY180_19580 Escherichia coli LY180 rho operon leader peptide YP_008566953.1 4107425 D 1335916 CDS YP_008566954.1 544392213 16981584 4107611..4108870 1 NC_022364.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcription termination factor Rho 4108870 rho 16981584 rho Escherichia coli LY180 transcription termination factor Rho YP_008566954.1 4107611 D 1335916 CDS YP_008566955.1 544392214 16981585 4108880..4109098 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4109098 16981585 LY180_19590 Escherichia coli LY180 hypothetical protein YP_008566955.1 4108880 D 1335916 CDS YP_008566956.1 544392215 16981586 4109110..4110213 1 NC_022364.1 catalyzes the formation of alpha-N-acetylglucosaminyl-pyrophosphoryl-undecaprenyl from alpha-N-acetylglucosaminyl 1-phosphate and the lipid carrier undecaprenyl phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase 4110213 16981586 LY180_19595 Escherichia coli LY180 UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase YP_008566956.1 4109110 D 1335916 CDS YP_008566957.1 544392216 16981587 4110225..4111271 1 NC_022364.1 Enterobacterial Common Antigen (ECA) polysaccharide chain length modulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; lipopolysaccharide biosynthesis protein WzzE 4111271 16981587 LY180_19600 Escherichia coli LY180 lipopolysaccharide biosynthesis protein WzzE YP_008566957.1 4110225 D 1335916 CDS YP_008566958.1 544392217 16981588 4111327..4112457 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP-N-acetylglucosamine 2-epimerase 4112457 16981588 LY180_19605 Escherichia coli LY180 UDP-N-acetylglucosamine 2-epimerase YP_008566958.1 4111327 D 1335916 CDS YP_008566959.1 544392218 16981589 4112454..4113716 1 NC_022364.1 catalyzes the oxidation of UDP-N-acetyl-D-mannosamine to UDP-N-acetylmannosaminuronic acid; Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP-N-acetyl-D-mannosamine dehydrogenase 4113716 wecC 16981589 wecC Escherichia coli LY180 UDP-N-acetyl-D-mannosamine dehydrogenase YP_008566959.1 4112454 D 1335916 CDS YP_008566960.1 544392219 16981590 4113716..4114783 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; dTDP-glucose 4,6-dehydratase 4114783 16981590 LY180_19615 Escherichia coli LY180 dTDP-glucose 4,6-dehydratase YP_008566960.1 4113716 D 1335916 CDS YP_008566961.1 544392220 16981591 4114802..4115683 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glucose-1-phosphate thymidylyltransferase 4115683 16981591 LY180_19620 Escherichia coli LY180 glucose-1-phosphate thymidylyltransferase YP_008566961.1 4114802 D 1335916 CDS YP_008566962.1 544392221 16981592 4115661..4116335 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; TDP-fucosamine acetyltransferase 4116335 16981592 LY180_19625 Escherichia coli LY180 TDP-fucosamine acetyltransferase YP_008566962.1 4115661 D 1335916 CDS YP_008566963.1 544392222 16981593 4116340..4117470 1 NC_022364.1 catalyzes the formation of dTDP-D-fucosamine from dTDP-4-oxo-6-deoxy-D-glucose in enterobacterial common antigen biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; TDP-4-oxo-6-deoxy-D-glucose aminotransferase 4117470 16981593 LY180_19630 Escherichia coli LY180 TDP-4-oxo-6-deoxy-D-glucose aminotransferase YP_008566963.1 4116340 D 1335916 CDS YP_008566964.1 544392223 16981594 4117472..4118722 1 NC_022364.1 involved in the movement of lipid III across the membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; translocase 4118722 16981594 LY180_19635 Escherichia coli LY180 translocase YP_008566964.1 4117472 D 1335916 CDS YP_008566965.1 544392224 16981595 4118719..4119798 1 NC_022364.1 catalyzes the synthesis of a lipid-linked intermediate involved in ECA synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; 4-alpha-L-fucosyltransferase 4119798 16981595 LY180_19640 Escherichia coli LY180 4-alpha-L-fucosyltransferase YP_008566965.1 4118719 D 1335916 CDS YP_008566966.1 544392225 16981596 4119795..4121147 1 NC_022364.1 enterobacterial common antigen polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.; polymerase 4121147 16981596 LY180_19645 Escherichia coli LY180 polymerase YP_008566966.1 4119795 D 1335916 CDS YP_008566967.1 544392226 16981597 4121150..4121890 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP-N-acetyl-D-mannosaminuronic acid transferase 4121890 16981597 LY180_19650 Escherichia coli LY180 UDP-N-acetyl-D-mannosaminuronic acid transferase YP_008566967.1 4121150 D 1335916 CDS YP_008566968.1 544392227 16981598 4122081..4123466 1 NC_022364.1 cryptic permease that may be involved in the transport of proline across the inner membrane; in Salmonella typhimurium, the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation; Derived by automated computational analysis using gene prediction method: Protein Homology.; permease 4123466 proY 16981598 proY Escherichia coli LY180 permease YP_008566968.1 4122081 D 1335916 CDS YP_008566969.1 544392228 16981603 4124152..4125387 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; arylsulfatase 4125387 16981603 LY180_19680 Escherichia coli LY180 arylsulfatase YP_008566969.1 4124152 D 1335916 CDS YP_008566970.1 544393220 16981604 complement(4125471..4125632) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; arylsulfatase 4125632 16981604 LY180_19685 Escherichia coli LY180 arylsulfatase YP_008566970.1 4125471 R 1335916 CDS YP_008566971.1 544392229 16981605 complement(4126311..4127507) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; protoheme IX biogenesis protein 4127507 16981605 LY180_19690 Escherichia coli LY180 protoheme IX biogenesis protein YP_008566971.1 4126311 R 1335916 CDS YP_008566972.1 544392230 16981606 complement(4127510..4128709) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; uroporphyrinogen III C-methyltransferase 4128709 16981606 LY180_19695 Escherichia coli LY180 uroporphyrinogen III C-methyltransferase YP_008566972.1 4127510 R 1335916 CDS YP_008566973.1 544392231 16981607 complement(4128731..4129471) 1 NC_022364.1 catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; functions in tetrapyrrole and heme biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; uroporphyrinogen-III synthase 4129471 hemD 16981607 hemD Escherichia coli LY180 uroporphyrinogen-III synthase YP_008566973.1 4128731 R 1335916 CDS YP_008566974.1 544392232 16981608 complement(4129468..4130409) 1 NC_022364.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; porphobilinogen deaminase 4130409 hemC 16981608 hemC Escherichia coli LY180 porphobilinogen deaminase YP_008566974.1 4129468 R 1335916 CDS YP_008566975.1 544392233 16981609 4130796..4133342 1 NC_022364.1 catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP; Derived by automated computational analysis using gene prediction method: Protein Homology.; adenylate cyclase 4133342 cyaA 16981609 cyaA Escherichia coli LY180 adenylate cyclase YP_008566975.1 4130796 D 1335916 CDS YP_008566976.1 544392234 16981610 complement(4133382..4133702) 1 NC_022364.1 iron-dependent inhibitor of iron-sulfur cluster formation; iron-binding and oxidizing protein; defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease; based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly; Derived by automated computational analysis using gene prediction method: Protein Homology.; frataxin 4133702 cyaY 16981610 cyaY Escherichia coli LY180 frataxin YP_008566976.1 4133382 R 1335916 CDS YP_008566977.1 544392235 16981611 4134165..4134368 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4134368 16981611 LY180_19720 Escherichia coli LY180 membrane protein YP_008566977.1 4134165 D 1335916 CDS YP_008566978.1 544392236 16981612 4134405..4135229 1 NC_022364.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; Derived by automated computational analysis using gene prediction method: Protein Homology.; diaminopimelate epimerase 4135229 dapF 16981612 dapF Escherichia coli LY180 diaminopimelate epimerase YP_008566978.1 4134405 D 1335916 CDS YP_008566979.1 544392237 16981613 4135226..4135933 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4135933 16981613 LY180_19730 Escherichia coli LY180 hypothetical protein YP_008566979.1 4135226 D 1335916 CDS YP_008566980.1 544392238 16981614 4135930..4136826 1 NC_022364.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; Derived by automated computational analysis using gene prediction method: Protein Homology.; tyrosine recombinase XerC 4136826 xerC 16981614 xerC Escherichia coli LY180 tyrosine recombinase XerC YP_008566980.1 4135930 D 1335916 CDS YP_008566981.1 544392239 16981615 4136826..4137542 1 NC_022364.1 YigB; member of the haloacid dehalogenase (HAD)-like hydrolases superfamily of protein; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.; flavin mononucleotide phosphatase 4137542 16981615 LY180_19740 Escherichia coli LY180 flavin mononucleotide phosphatase YP_008566981.1 4136826 D 1335916 CDS YP_008566982.1 544392240 16981616 4137626..4139788 1 NC_022364.1 unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present; involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA-dependent helicase 4139788 uvrD 16981616 uvrD Escherichia coli LY180 DNA-dependent helicase YP_008566982.1 4137626 D 1335916 CDS YP_008566983.1 544392241 16981617 complement(4139935..4140699) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4140699 16981617 LY180_19750 Escherichia coli LY180 hypothetical protein YP_008566983.1 4139935 R 1335916 CDS YP_008566984.1 544393221 16981618 complement(4140920..4141054) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4141054 16981618 LY180_19755 Escherichia coli LY180 hypothetical protein YP_008566984.1 4140920 R 1335916 CDS YP_008566985.1 544392242 16981619 4141069..4142019 1 NC_022364.1 responsible for the influx of magnesium ions; Derived by automated computational analysis using gene prediction method: Protein Homology.; magnesium/nickel/cobalt transporter CorA 4142019 16981619 LY180_19760 Escherichia coli LY180 magnesium/nickel/cobalt transporter CorA YP_008566985.1 4141069 D 1335916 CDS YP_008566986.1 544393222 16981621 complement(4142549..4142884) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4142884 16981621 LY180_19770 Escherichia coli LY180 hypothetical protein YP_008566986.1 4142549 R 1335916 CDS YP_008566987.1 544393223 16981622 complement(4142897..4144105) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4144105 16981622 LY180_19775 Escherichia coli LY180 hypothetical protein YP_008566987.1 4142897 R 1335916 CDS YP_008566988.1 544392243 16981623 complement(4144175..4144735) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4144735 16981623 LY180_19780 Escherichia coli LY180 hypothetical protein YP_008566988.1 4144175 R 1335916 CDS YP_008566989.1 544393224 16981624 4144949..4145068 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; magnesium transporter 4145068 16981624 LY180_19785 Escherichia coli LY180 magnesium transporter YP_008566989.1 4144949 D 1335916 CDS YP_008566990.1 544392244 16981625 4145690..4145989 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4145989 16981625 LY180_19790 Escherichia coli LY180 membrane protein YP_008566990.1 4145690 D 1335916 CDS YP_008566991.1 544392245 16981626 complement(4146036..4146923) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; chloramphenical resistance permease RarD 4146923 16981626 LY180_19795 Escherichia coli LY180 chloramphenical resistance permease RarD YP_008566991.1 4146036 R 1335916 CDS YP_008566992.1 544392246 16981627 complement(4146975..4147442) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4147442 16981627 LY180_19800 Escherichia coli LY180 hypothetical protein YP_008566992.1 4146975 R 1335916 CDS YP_008566993.1 544392247 16981628 4147607..4148476 1 NC_022364.1 catalyzes the hydrolysis of phosphatidylcholine; Derived by automated computational analysis using gene prediction method: Protein Homology.; phospholipase A 4148476 16981628 LY180_19805 Escherichia coli LY180 phospholipase A YP_008566993.1 4147607 D 1335916 CDS YP_008566994.1 544392248 16981629 4148603..4150438 1 NC_022364.1 functions in blocking illegitimate recombination, enhancing topoisomerase activity, initiating SOS signaling and clearing blocked replication forks; component of the RecF recombinational pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-dependent DNA helicase RecQ 4150438 16981629 LY180_19810 Escherichia coli LY180 ATP-dependent DNA helicase RecQ YP_008566994.1 4148603 D 1335916 CDS YP_008566995.1 544392249 16981630 4150502..4151122 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; threonine transporter RhtB 4151122 16981630 LY180_19815 Escherichia coli LY180 threonine transporter RhtB YP_008566995.1 4150502 D 1335916 CDS YP_008566996.1 544392250 16981631 complement(4151184..4151804) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; threonine transporter RhtB 4151804 rhtB 16981631 rhtB Escherichia coli LY180 threonine transporter RhtB YP_008566996.1 4151184 R 1335916 CDS YP_008566997.1 544392251 16981632 4151915..4152937 1 NC_022364.1 lecithinase B; catalyzes the conversion of 1-lysophosphatidylcholine to glycerophosphocholine; can also hydrolyze 2-acyl glycerophosphoethanolamine and other substrates; Derived by automated computational analysis using gene prediction method: Protein Homology.; lysophospholipase L2 4152937 16981632 LY180_19825 Escherichia coli LY180 lysophospholipase L2 YP_008566997.1 4151915 D 1335916 CDS YP_008566998.1 544392252 16981633 4152945..4153745 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrolase 4153745 16981633 LY180_19830 Escherichia coli LY180 hydrolase YP_008566998.1 4152945 D 1335916 CDS YP_008566999.1 544393225 16981634 4153821..4154720 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 4154720 16981634 LY180_19835 Escherichia coli LY180 membrane protein YP_008566999.1 4153821 D 1335916 CDS YP_008567000.1 544392253 16981635 complement(4154608..4155561) 1 NC_022364.1 homocysteine-binding ; positive regulator of metA, metE and metH; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4155561 16981635 LY180_19840 Escherichia coli LY180 transcriptional regulator YP_008567000.1 4154608 R 1335916 CDS YP_008567001.1 544392254 16981636 4155684..4157945 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase 4157945 16981636 LY180_19845 Escherichia coli LY180 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase YP_008567001.1 4155684 D 1335916 CDS YP_008567002.1 544392255 16981637 complement(4157984..4158799) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; carboxymethylenebutenolidase 4158799 16981637 LY180_19850 Escherichia coli LY180 carboxymethylenebutenolidase YP_008567002.1 4157984 R 1335916 CDS YP_008567003.1 544392256 16981638 4159061..4159822 1 NC_022364.1 catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate; involved in the pyrimidine salvage pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.; uridine phosphorylase 4159822 16981638 LY180_19855 Escherichia coli LY180 uridine phosphorylase YP_008567003.1 4159061 D 1335916 CDS YP_008567004.1 544392257 16981639 4159963..4161390 1 NC_022364.1 YigN; nuclease that may cleave DNA structures arising during the recombination of short-inverted repeats and thereby prevents the inversion of the internal sequence; transcription is induced by DNA-damaging agents such as nalidixic acid or mitomycin C in a LexA-dependent manner; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA recombination protein RmuC 4161390 16981639 LY180_19860 Escherichia coli LY180 DNA recombination protein RmuC YP_008567004.1 4159963 D 1335916 CDS YP_008567005.1 544392258 16981640 4161485..4162240 1 NC_022364.1 Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone and menaquinone; Derived by automated computational analysis using gene prediction method: Protein Homology.; ubiquinone/menaquinone biosynthesis methyltransferase 4162240 ubiE 16981640 ubiE Escherichia coli LY180 ubiquinone/menaquinone biosynthesis methyltransferase YP_008567005.1 4161485 D 1335916 CDS YP_008567006.1 544392259 16981641 4162254..4162859 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4162859 16981641 LY180_19870 Escherichia coli LY180 membrane protein YP_008567006.1 4162254 D 1335916 CDS YP_008567007.1 544392260 16981642 4162856..4164496 1 NC_022364.1 an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone; functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis; similar to eukaryotic proteins that exhibit kinase functions; Derived by automated computational analysis using gene prediction method: Protein Homology.; ubiquinone biosynthesis protein UbiB 4164496 ubiB 16981642 ubiB Escherichia coli LY180 ubiquinone biosynthesis protein UbiB YP_008567007.1 4162856 D 1335916 CDS YP_008567008.1 544392261 16981643 4164575..4164844 1 NC_022364.1 TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; Derived by automated computational analysis using gene prediction method: Protein Homology.; preprotein translocase subunit TatA 4164844 tatA 16981643 tatA Escherichia coli LY180 preprotein translocase subunit TatA YP_008567008.1 4164575 D 1335916 CDS YP_008567009.1 544392262 16981644 4164848..4165363 1 NC_022364.1 mediates the export of protein precursors bearing twin-arginine signal peptides; Derived by automated computational analysis using gene prediction method: Protein Homology.; translocase 4165363 16981644 LY180_19885 Escherichia coli LY180 translocase YP_008567009.1 4164848 D 1335916 CDS YP_008567010.1 544392263 16981645 4165366..4166142 1 NC_022364.1 with TatABE forms the twin-arginine translocation complex which is involved in the transport of proteins across the cytoplasmic membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; twin-arginine protein translocation system subunit TatC 4166142 16981645 LY180_19890 Escherichia coli LY180 twin-arginine protein translocation system subunit TatC YP_008567010.1 4165366 D 1335916 CDS YP_008567011.1 544392264 16981647 complement(4166963..4167451) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4167451 rfaH 16981647 rfaH Escherichia coli LY180 transcriptional regulator YP_008567011.1 4166963 R 1335916 CDS YP_008567012.1 544392265 16981648 4167618..4169111 1 NC_022364.1 catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-polyprenyl-4-hydroxybenzoate decarboxylase 4169111 16981648 LY180_19905 Escherichia coli LY180 3-polyprenyl-4-hydroxybenzoate decarboxylase YP_008567012.1 4167618 D 1335916 CDS YP_008567013.1 544392266 16981649 4169157..4169858 1 NC_022364.1 NAD(P)H-flavin reductase; catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide; in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin; Derived by automated computational analysis using gene prediction method: Protein Homology.; FMN reductase 4169858 fre 16981649 fre Escherichia coli LY180 FMN reductase YP_008567013.1 4169157 D 1335916 CDS YP_008567014.1 544392267 16981650 complement(4170050..4171213) 1 NC_022364.1 FadA; fatty acid oxidation complex component beta; functions in a heterotetramer with FadB; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-ketoacyl-CoA thiolase 4171213 fadA 16981650 fadA Escherichia coli LY180 3-ketoacyl-CoA thiolase YP_008567014.1 4170050 R 1335916 CDS YP_008567015.1 544392268 16981651 complement(4171223..4173412) 1 NC_022364.1 includes enoyl-CoA hydratase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, 3-hydroxyacyl-CoA dehydrogenase, and 3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities; forms a heterotetramer with FadA; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids; Derived by automated computational analysis using gene prediction method: Protein Homology.; multifunctional fatty acid oxidation complex subunit alpha 4173412 fadB 16981651 fadB Escherichia coli LY180 multifunctional fatty acid oxidation complex subunit alpha YP_008567015.1 4171223 R 1335916 CDS YP_008567016.1 544392269 16981652 4173602..4174933 1 NC_022364.1 catalyzes the hydrolysis of dipeptides with a proline at the C-terminal; also catalyzes the low efficiency hydrolysis of organophosphate di- and tri-esters; Derived by automated computational analysis using gene prediction method: Protein Homology.; proline dipeptidase 4174933 16981652 LY180_19925 Escherichia coli LY180 proline dipeptidase YP_008567016.1 4173602 D 1335916 CDS YP_008567017.1 544392270 16981653 4174933..4175547 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4175547 16981653 LY180_19930 Escherichia coli LY180 hypothetical protein YP_008567017.1 4174933 D 1335916 CDS YP_008567018.1 544392271 16981654 4175586..4177037 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; potassium transporter 4177037 16981654 LY180_19935 Escherichia coli LY180 potassium transporter YP_008567018.1 4175586 D 1335916 CDS YP_008567019.1 544392272 16981655 4177049..4177594 1 NC_022364.1 catalyzes the oxidation of protoporphyrinogen IX to form protoporphyrin IX; Derived by automated computational analysis using gene prediction method: Protein Homology.; protoporphyrinogen oxidase 4177594 hemG 16981655 hemG Escherichia coli LY180 protoporphyrinogen oxidase YP_008567019.1 4177049 D 1335916 CDS YP_008567020.1 544392273 16981661 complement(4183176..4183703) 1 NC_022364.1 in Escherichia coli the MobB protein is not essential but has been found to interact with multiple proteins involved in the molybdopterin guanine dinucleotide cofactor biosynthesis pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.; molybdopterin-guanine dinucleotide biosynthesis protein B 4183703 16981661 LY180_19970 Escherichia coli LY180 molybdopterin-guanine dinucleotide biosynthesis protein B YP_008567020.1 4183176 R 1335916 CDS YP_008567021.1 544392274 16981662 complement(4183685..4184269) 1 NC_022364.1 in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; molybdopterin-guanine dinucleotide biosynthesis protein MobA 4184269 mobA 16981662 mobA Escherichia coli LY180 molybdopterin-guanine dinucleotide biosynthesis protein MobA YP_008567021.1 4183685 R 1335916 CDS YP_008567022.1 544392275 16981663 4184339..4184608 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4184608 16981663 LY180_19980 Escherichia coli LY180 hypothetical protein YP_008567022.1 4184339 D 1335916 CDS YP_008567023.1 544392276 16981664 4184685..4185671 1 NC_022364.1 catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages; Derived by automated computational analysis using gene prediction method: Protein Homology.; serine/threonine protein kinase 4185671 16981664 LY180_19985 Escherichia coli LY180 serine/threonine protein kinase YP_008567023.1 4184685 D 1335916 CDS YP_008567024.1 544392277 16981665 4185688..4186314 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; thiol-disulfide isomerase 4186314 16981665 LY180_19990 Escherichia coli LY180 thiol-disulfide isomerase YP_008567024.1 4185688 D 1335916 CDS YP_008567025.1 544393226 16981666 4186468..4186761 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4186761 16981666 LY180_19995 Escherichia coli LY180 hypothetical protein YP_008567025.1 4186468 D 1335916 CDS YP_008567026.1 544393227 16981667 4186865..4188073 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4188073 16981667 LY180_20000 Escherichia coli LY180 hypothetical protein YP_008567026.1 4186865 D 1335916 CDS YP_008567027.1 544392278 16981668 4188070..4189236 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4189236 16981668 LY180_20005 Escherichia coli LY180 hypothetical protein YP_008567027.1 4188070 D 1335916 CDS YP_008567028.1 544392279 16981669 complement(4189277..4190209) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acyltransferase 4190209 16981669 LY180_20010 Escherichia coli LY180 acyltransferase YP_008567028.1 4189277 R 1335916 CDS YP_008567029.1 544392280 16981670 complement(4190329..4190571) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4190571 16981670 LY180_20015 Escherichia coli LY180 hypothetical protein YP_008567029.1 4190329 R 1335916 CDS YP_008567030.1 544392281 16981671 4190573..4193359 1 NC_022364.1 has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA polymerase I 4193359 16981671 LY180_20020 Escherichia coli LY180 DNA polymerase I YP_008567030.1 4190573 D 1335916 CDS YP_008567031.1 544392282 16981672 complement(4193741..4194373) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; GTP-binding protein YsxC 4194373 16981672 LY180_20025 Escherichia coli LY180 GTP-binding protein YsxC YP_008567031.1 4193741 R 1335916 CDS YP_008567032.1 544392283 16981673 4194955..4195464 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; GTPase activator 4195464 16981673 LY180_20030 Escherichia coli LY180 GTPase activator YP_008567032.1 4194955 D 1335916 CDS YP_008567033.1 544392284 16981674 4195653..4197026 1 NC_022364.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; Derived by automated computational analysis using gene prediction method: Protein Homology.; coproporphyrinogen III oxidase 4197026 16981674 LY180_20035 Escherichia coli LY180 coproporphyrinogen III oxidase YP_008567033.1 4195653 D 1335916 CDS YP_008567034.1 544392285 16981675 complement(4197438..4198856) 1 NC_022364.1 response regulator of a two-component regulatory system involved in the activation of nitrogen assimilation genes; interacts with sigma-54; Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrogen regulation protein NR(I) 4198856 glnG 16981675 glnG Escherichia coli LY180 nitrogen regulation protein NR(I) YP_008567034.1 4197438 R 1335916 CDS YP_008567035.1 544392286 16981676 complement(4198859..4199908) 1 NC_022364.1 sensory histidine kinase in two-component regulatory system with GlnG; acts as a signal transducer which responds to the nitrogen level of cell and modulates the activity of ntrC by phosphorylation/dephosphorylation; Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrogen regulation protein NR(II) 4199908 glnL 16981676 glnL Escherichia coli LY180 nitrogen regulation protein NR(II) YP_008567035.1 4198859 R 1335916 CDS YP_008567036.1 544393228 16981677 4200007..4200186 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4200186 16981677 LY180_20050 Escherichia coli LY180 hypothetical protein YP_008567036.1 4200007 D 1335916 CDS YP_008567037.1 544392287 16981678 complement(4200227..4201636) 1 NC_022364.1 forms a homododecamer; forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate; also functions in the assimilation of ammonia; highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues; addition of adenylyl groups results in inactivation of the enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutamine synthetase 4201636 glnA 16981678 glnA Escherichia coli LY180 glutamine synthetase YP_008567037.1 4200227 R 1335916 CDS YP_008567038.1 544392288 16981679 4202009..4203832 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; GTP-binding protein TypA 4203832 16981679 LY180_20060 Escherichia coli LY180 GTP-binding protein TypA YP_008567038.1 4202009 D 1335916 CDS YP_008567039.1 544392289 16981680 4204049..4204759 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; GntR family transcriptional regulator 4204759 16981680 LY180_20065 Escherichia coli LY180 GntR family transcriptional regulator YP_008567039.1 4204049 D 1335916 CDS YP_008567040.1 544392290 16981681 4204767..4205747 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4205747 16981681 LY180_20070 Escherichia coli LY180 hypothetical protein YP_008567040.1 4204767 D 1335916 CDS YP_008567041.1 544392291 16981682 4205849..4207114 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4207114 16981682 LY180_20075 Escherichia coli LY180 membrane protein YP_008567041.1 4205849 D 1335916 CDS YP_008567042.1 544392292 16981683 complement(4207205..4207897) 1 NC_022364.1 porin involved in the transport of small molecular weight solutes (up to 600 Daltons) across the cell wall; specific substrate still unknown; Derived by automated computational analysis using gene prediction method: Protein Homology.; outer membrane porin L 4207897 ompL 16981683 ompL Escherichia coli LY180 outer membrane porin L YP_008567042.1 4207205 R 1335916 CDS YP_008567043.1 544392293 16981684 complement(4207965..4209368) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4209368 16981684 LY180_20085 Escherichia coli LY180 membrane protein YP_008567043.1 4207965 R 1335916 CDS YP_008567044.1 544392294 16981685 complement(4209411..4210796) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4210796 16981685 LY180_20090 Escherichia coli LY180 membrane protein YP_008567044.1 4209411 R 1335916 CDS YP_008567045.1 544392295 16981686 complement(4210842..4212878) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; alpha-glucosidase 4212878 16981686 LY180_20095 Escherichia coli LY180 alpha-glucosidase YP_008567045.1 4210842 R 1335916 CDS YP_008567046.1 544392296 16981687 complement(4213077..4214003) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; aldose-1-epimerase 4214003 16981687 LY180_20100 Escherichia coli LY180 aldose-1-epimerase YP_008567046.1 4213077 R 1335916 CDS YP_008567047.1 544392297 16981688 complement(4214117..4215358) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar isomerase 4215358 16981688 LY180_20105 Escherichia coli LY180 sugar isomerase YP_008567047.1 4214117 R 1335916 CDS YP_008567048.1 544392298 16981689 complement(4215375..4216253) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; aldolase 4216253 16981689 LY180_20110 Escherichia coli LY180 aldolase YP_008567048.1 4215375 R 1335916 CDS YP_008567049.1 544392299 16981690 complement(4216277..4217173) 1 NC_022364.1 catalyzes the formation of gamma hydroxybutyrate from succinate semialdehyde; Derived by automated computational analysis using gene prediction method: Protein Homology.; NADH-dependent gamma-hydroxybutyrate dehydrogenase 4217173 16981690 LY180_20115 Escherichia coli LY180 NADH-dependent gamma-hydroxybutyrate dehydrogenase YP_008567049.1 4216277 R 1335916 CDS YP_008567050.1 544392300 16981691 4217341..4218237 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar kinase 4218237 16981691 LY180_20120 Escherichia coli LY180 sugar kinase YP_008567050.1 4217341 D 1335916 CDS YP_008567051.1 544392301 16981692 4218271..4219056 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DeoR family transcriptional regulator 4219056 16981692 LY180_20125 Escherichia coli LY180 DeoR family transcriptional regulator YP_008567051.1 4218271 D 1335916 CDS YP_008567052.1 544392302 16981693 4219155..4219754 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; alpha-D-glucose-1-phosphatase 4219754 16981693 LY180_20130 Escherichia coli LY180 alpha-D-glucose-1-phosphatase YP_008567052.1 4219155 D 1335916 CDS YP_008567053.1 544392303 16981694 4219748..4220620 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4220620 16981694 LY180_20135 Escherichia coli LY180 membrane protein YP_008567053.1 4219748 D 1335916 CDS YP_008567054.1 544392304 16981695 4220617..4221054 1 NC_022364.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; Derived by automated computational analysis using gene prediction method: Protein Homology.; D-tyrosyl-tRNA(Tyr) deacylase 4221054 16981695 LY180_20140 Escherichia coli LY180 D-tyrosyl-tRNA(Tyr) deacylase YP_008567054.1 4220617 D 1335916 CDS YP_008567055.1 544392305 16981696 4221051..4222040 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4222040 16981696 LY180_20145 Escherichia coli LY180 hypothetical protein YP_008567055.1 4221051 D 1335916 CDS YP_008567056.1 544393229 16981697 complement(4222104..4223012) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; lipase 4223012 16981697 LY180_20150 Escherichia coli LY180 lipase YP_008567056.1 4222104 R 1335916 CDS YP_008567057.1 544393230 16981698 4223241..4223552 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transcription elongation factor GreB 4223552 16981698 LY180_20155 Escherichia coli LY180 transcription elongation factor GreB YP_008567057.1 4223241 D 1335916 CDS YP_008567058.1 544393231 16981699 4223553..4223843 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; Cro/Cl family transcriptional regulator 4223843 16981699 LY180_20160 Escherichia coli LY180 Cro/Cl family transcriptional regulator YP_008567058.1 4223553 D 1335916 CDS YP_008567059.1 544393232 16981700 4223929..4224021 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4224021 16981700 LY180_20165 Escherichia coli LY180 hypothetical protein YP_008567059.1 4223929 D 1335916 CDS YP_008567060.1 544392306 16981701 4224448..4224666 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4224666 16981701 LY180_20170 Escherichia coli LY180 hypothetical protein YP_008567060.1 4224448 D 1335916 CDS YP_008567061.1 544392307 16981702 4224885..4225127 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4225127 16981702 LY180_20175 Escherichia coli LY180 hypothetical protein YP_008567061.1 4224885 D 1335916 CDS YP_008567062.1 544392308 16981704 complement(4225457..4226386) 1 NC_022364.1 required for the formation of active formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.; formate dehydrogenase accessory protein FdhE 4226386 16981704 LY180_20185 Escherichia coli LY180 formate dehydrogenase accessory protein FdhE YP_008567062.1 4225457 R 1335916 CDS YP_008567063.1 544392309 16981705 complement(4226383..4227018) 1 NC_022364.1 cytochrome b556(FDO) component; heme containing; Derived by automated computational analysis using gene prediction method: Protein Homology.; formate dehydrogenase-N subunit gamma 4227018 16981705 LY180_20190 Escherichia coli LY180 formate dehydrogenase-N subunit gamma YP_008567063.1 4226383 R 1335916 CDS YP_008567064.1 544392310 16981706 complement(4227015..4227917) 1 NC_022364.1 beta subunit; involved in the use of formate as an electron donor during aerobic respiration; acts to transfer electrons from the major(alpha subunit) to the cytochrome b556(gamma subunit); Derived by automated computational analysis using gene prediction method: Protein Homology.; formate dehydrogenase-N subunit beta 4227917 16981706 LY180_20195 Escherichia coli LY180 formate dehydrogenase-N subunit beta YP_008567064.1 4227015 R 1335916 CDS YP_008567065.1 544393233 16981707 complement(4227930..4230344) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; formate dehydrogenase subunit alpha 4230344 16981707 LY180_20200 Escherichia coli LY180 formate dehydrogenase subunit alpha YP_008567065.1 4227930 R 1335916 CDS YP_008567066.1 544393234 16981708 complement(4230393..4230980) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; sulfate ABC transporter substrate-binding protein 4230980 16981708 LY180_20205 Escherichia coli LY180 sulfate ABC transporter substrate-binding protein YP_008567066.1 4230393 R 1335916 CDS YP_008567067.1 544392311 16981709 4231174..4232007 1 NC_022364.1 involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; Derived by automated computational analysis using gene prediction method: Protein Homology.; formate dehydrogenase accessory protein 4232007 16981709 LY180_20210 Escherichia coli LY180 formate dehydrogenase accessory protein YP_008567067.1 4231174 D 1335916 CDS YP_008567068.1 544392312 16981710 4232160..4233200 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4233200 16981710 LY180_20215 Escherichia coli LY180 hypothetical protein YP_008567068.1 4232160 D 1335916 CDS YP_008567069.1 544392313 16981711 complement(4233250..4234998) 1 NC_022364.1 repressor of the frv operon, involved in phosphoenolpyruvate:sugar phosphotransferase system; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS fructose transporter subunit IIA 4234998 16981711 LY180_20220 Escherichia coli LY180 PTS fructose transporter subunit IIA YP_008567069.1 4233250 R 1335916 CDS YP_008567070.1 544392314 16981712 complement(4234998..4236068) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidase 4236068 16981712 LY180_20225 Escherichia coli LY180 peptidase YP_008567070.1 4234998 R 1335916 CDS YP_008567071.1 544392315 16981713 complement(4236058..4237509) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS fructose transporter subunit IIBC 4237509 16981713 LY180_20230 Escherichia coli LY180 PTS fructose transporter subunit IIBC YP_008567071.1 4236058 R 1335916 CDS YP_008567072.1 544392316 16981714 complement(4237520..4237966) 1 NC_022364.1 with FrvBRX is part of the phosphoenolpyruvate-dependent sugar phosphotransferase system involved in the transport and phosphorylation of sugars; possibly responsible for the sugar specificity of the system; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS fructose transporter subunit EIIA 4237966 16981714 LY180_20235 Escherichia coli LY180 PTS fructose transporter subunit EIIA YP_008567072.1 4237520 R 1335916 CDS YP_008567073.1 544392317 16981715 complement(4238267..4238581) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; L-rhamnose mutarotase 4238581 16981715 LY180_20240 Escherichia coli LY180 L-rhamnose mutarotase YP_008567073.1 4238267 R 1335916 CDS YP_008567074.1 544392318 16981716 complement(4238591..4239415) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; rhamnulose-1-phosphate aldolase 4239415 16981716 LY180_20245 Escherichia coli LY180 rhamnulose-1-phosphate aldolase YP_008567074.1 4238591 R 1335916 CDS YP_008567075.1 544392319 16981717 complement(4239657..4240916) 1 NC_022364.1 catalyzes the formation of L-rhamnulose from L-rhamnose; Derived by automated computational analysis using gene prediction method: Protein Homology.; rhamnose isomerase 4240916 16981717 LY180_20250 Escherichia coli LY180 rhamnose isomerase YP_008567075.1 4239657 R 1335916 CDS YP_008567076.1 544392320 16981718 complement(4240913..4242382) 1 NC_022364.1 catalyzes the ATP-dependent phosphorylation of rhamnulose; Derived by automated computational analysis using gene prediction method: Protein Homology.; rhamnulokinase 4242382 rhaB 16981718 rhaB Escherichia coli LY180 rhamnulokinase YP_008567076.1 4240913 R 1335916 CDS YP_008567077.1 544393235 16981719 4242461..4242610 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4242610 16981719 LY180_20260 Escherichia coli LY180 hypothetical protein YP_008567077.1 4242461 D 1335916 CDS YP_008567078.1 544392321 16981720 4242670..4243506 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; AraC family transcriptional regulator 4243506 16981720 LY180_20265 Escherichia coli LY180 AraC family transcriptional regulator YP_008567078.1 4242670 D 1335916 CDS YP_008567079.1 544392322 16981721 4243490..4244428 1 NC_022364.1 activates the expression of rhaRS in response to L-rhamnose; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4244428 16981721 LY180_20270 Escherichia coli LY180 transcriptional regulator YP_008567079.1 4243490 D 1335916 CDS YP_008567080.1 544392323 16981722 complement(4244425..4245459) 1 NC_022364.1 transports L-rhamnose and L-lyxose into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar:proton symporter 4245459 16981722 LY180_20275 Escherichia coli LY180 sugar:proton symporter YP_008567080.1 4244425 R 1335916 CDS YP_008567081.1 544392324 16981723 4245744..4246364 1 NC_022364.1 SodA; manganese binding; only present under aerobic conditions; destroys free radicals; Derived by automated computational analysis using gene prediction method: Protein Homology.; superoxide dismutase 4246364 16981723 LY180_20280 Escherichia coli LY180 superoxide dismutase YP_008567081.1 4245744 D 1335916 CDS YP_008567082.1 544393236 16981724 complement(4246405..4246521) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4246521 16981724 LY180_20285 Escherichia coli LY180 hypothetical protein YP_008567082.1 4246405 R 1335916 CDS YP_008567083.1 544392325 16981725 4246624..4247607 1 NC_022364.1 transports degraded pectin products into the bacterial cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-keto-3-deoxygluconate permease 4247607 16981725 LY180_20290 Escherichia coli LY180 2-keto-3-deoxygluconate permease YP_008567083.1 4246624 D 1335916 CDS YP_008567084.1 544392326 16981726 4247756..4248430 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 6-N-hydroxylaminopurine resistance protein 4248430 16981726 LY180_20295 Escherichia coli LY180 6-N-hydroxylaminopurine resistance protein YP_008567084.1 4247756 D 1335916 CDS YP_008567085.1 544392327 16981727 complement(4248536..4249909) 1 NC_022364.1 part of two-component CpxA/CpxR system; senses envelope stress; upregulates a number of periplasmic folding and trafficking factors; Derived by automated computational analysis using gene prediction method: Protein Homology.; histidine kinase 4249909 cpxA 16981727 cpxA Escherichia coli LY180 histidine kinase YP_008567085.1 4248536 R 1335916 CDS YP_008567086.1 544392328 16981728 complement(4249906..4250604) 1 NC_022364.1 response regulator in two-component regulatory system with CpxA; part of the envelope stress response system; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4250604 16981728 LY180_20305 Escherichia coli LY180 transcriptional regulator YP_008567086.1 4249906 R 1335916 CDS YP_008567087.1 544392329 16981729 4250751..4251254 1 NC_022364.1 repressor of the Cpx envelope stress response pathway which occurs via periplasmic interactions with CpxA; CpxP is degraded by DegP protease especially in the presence of misfolded substrates; Derived by automated computational analysis using gene prediction method: Protein Homology.; repressor CpxP 4251254 cpxP 16981729 cpxP Escherichia coli LY180 repressor CpxP YP_008567087.1 4250751 D 1335916 CDS YP_008567088.1 544392330 16981730 complement(4251440..4252420) 1 NC_022364.1 Int; binds dsDNA; cleaves and religates DNA through a covalent phosphotyrosine intermediate; bacteriophage P2 Int mediates the site-specific recombination event leading to integration or excision of the phage genome into or out of the Escherichia coli chromosome; integrative recombination occurs between the phage attachment site attP and the bacterial attachment site attB, integrative recombination also requires E. coli IHF; excision requires IHF and the phage-encoded Cox protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; integrase 4252420 16981730 LY180_20315 Escherichia coli LY180 integrase YP_008567088.1 4251440 R 1335916 CDS YP_008567089.1 544392331 16981731 complement(4252490..4252783) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; repressor 4252783 16981731 LY180_20320 Escherichia coli LY180 repressor YP_008567089.1 4252490 R 1335916 CDS YP_008567090.1 544392332 16981732 4252936..4253208 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; regulatory protein 4253208 16981732 LY180_20325 Escherichia coli LY180 regulatory protein YP_008567090.1 4252936 D 1335916 CDS YP_008567091.1 544392333 16981733 4253211..4253381 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4253381 16981733 LY180_20330 Escherichia coli LY180 hypothetical protein YP_008567091.1 4253211 D 1335916 CDS YP_008567092.1 544393237 16981734 4253378..4253878 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4253878 16981734 LY180_20335 Escherichia coli LY180 hypothetical protein YP_008567092.1 4253378 D 1335916 CDS YP_008567093.1 544393238 16981735 4253942..4254166 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4254166 16981735 LY180_20340 Escherichia coli LY180 hypothetical protein YP_008567093.1 4253942 D 1335916 CDS YP_008567094.1 544392334 16981736 4254166..4254468 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4254468 16981736 LY180_20345 Escherichia coli LY180 hypothetical protein YP_008567094.1 4254166 D 1335916 CDS YP_008567095.1 544392335 16981737 4254468..4254692 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4254692 16981737 LY180_20350 Escherichia coli LY180 hypothetical protein YP_008567095.1 4254468 D 1335916 CDS YP_008567096.1 544393239 16981738 4254689..4254964 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4254964 16981738 LY180_20355 Escherichia coli LY180 hypothetical protein YP_008567096.1 4254689 D 1335916 CDS YP_008567097.1 544392336 16981739 4254954..4257239 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; replication protein 4257239 16981739 LY180_20360 Escherichia coli LY180 replication protein YP_008567097.1 4254954 D 1335916 CDS YP_008567098.1 544392337 16981740 4257236..4257691 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; RNA-binding protein 4257691 16981740 LY180_20365 Escherichia coli LY180 RNA-binding protein YP_008567098.1 4257236 D 1335916 CDS YP_008567099.1 544393240 16981741 4257691..4257897 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4257897 16981741 LY180_20370 Escherichia coli LY180 hypothetical protein YP_008567099.1 4257691 D 1335916 CDS YP_008567100.1 544393241 16981742 4258218..4259078 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; HsdRM 4259078 16981742 LY180_20375 Escherichia coli LY180 HsdRM YP_008567100.1 4258218 D 1335916 CDS YP_008567101.1 544393242 16981743 complement(4259075..4260112) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4260112 16981743 LY180_20380 Escherichia coli LY180 hypothetical protein YP_008567101.1 4259075 R 1335916 CDS YP_008567102.1 544393243 16981744 complement(4260105..4261178) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4261178 16981744 LY180_20385 Escherichia coli LY180 hypothetical protein YP_008567102.1 4260105 R 1335916 CDS YP_008567103.1 544392338 16981745 complement(4261594..4262628) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Presumed portal vertex protein 4262628 16981745 LY180_20390 Escherichia coli LY180 Presumed portal vertex protein YP_008567103.1 4261594 R 1335916 CDS YP_008567104.1 544392339 16981746 complement(4262628..4264400) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; terminase 4264400 16981746 LY180_20395 Escherichia coli LY180 terminase YP_008567104.1 4262628 R 1335916 CDS YP_008567105.1 544392340 16981747 4264574..4265428 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; precorrin-8W decarboxylase 4265428 16981747 LY180_20400 Escherichia coli LY180 precorrin-8W decarboxylase YP_008567105.1 4264574 D 1335916 CDS YP_008567106.1 544392341 16981748 4266565..4267308 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; terminase 4267308 16981748 LY180_20405 Escherichia coli LY180 terminase YP_008567106.1 4266565 D 1335916 CDS YP_008567107.1 544392342 16981749 4267408..4267917 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Head completion/stabilization protein 4267917 16981749 LY180_20410 Escherichia coli LY180 Head completion/stabilization protein YP_008567107.1 4267408 D 1335916 CDS YP_008567108.1 544392343 16981750 4267917..4268120 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 4268120 16981750 LY180_20415 Escherichia coli LY180 tail protein YP_008567108.1 4267917 D 1335916 CDS YP_008567109.1 544392344 16981751 4268124..4268405 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; holin 4268405 16981751 LY180_20420 Escherichia coli LY180 holin YP_008567109.1 4268124 D 1335916 CDS YP_008567110.1 544392345 16981752 4268405..4268902 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; lysozyme 4268902 16981752 LY180_20425 Escherichia coli LY180 lysozyme YP_008567110.1 4268405 D 1335916 CDS YP_008567111.1 544392346 16981753 4268917..4269342 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; protein lysA 4269342 16981753 LY180_20430 Escherichia coli LY180 protein lysA YP_008567111.1 4268917 D 1335916 CDS YP_008567112.1 544392347 16981754 4269330..4269755 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4269755 16981754 LY180_20435 Escherichia coli LY180 hypothetical protein YP_008567112.1 4269330 D 1335916 CDS YP_008567113.1 544393244 16981755 4269742..4269900 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; lysC 4269900 16981755 LY180_20440 Escherichia coli LY180 lysC YP_008567113.1 4269742 D 1335916 CDS YP_008567114.1 544392348 16981756 4269863..4270330 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail fiber protein 4270330 16981756 LY180_20445 Escherichia coli LY180 tail fiber protein YP_008567114.1 4269863 D 1335916 CDS YP_008567115.1 544392349 16981757 4270323..4270775 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 4270775 16981757 LY180_20450 Escherichia coli LY180 tail protein YP_008567115.1 4270323 D 1335916 CDS YP_008567116.1 544392350 16981758 4270842..4271477 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; baseplate assembly protein 4271477 16981758 LY180_20455 Escherichia coli LY180 baseplate assembly protein YP_008567116.1 4270842 D 1335916 CDS YP_008567117.1 544392351 16981759 4271474..4271821 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; baseplate assembly protein 4271821 16981759 LY180_20460 Escherichia coli LY180 baseplate assembly protein YP_008567117.1 4271474 D 1335916 CDS YP_008567118.1 544392352 16981760 4271826..4272734 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; baseplate assembly protein 4272734 16981760 LY180_20465 Escherichia coli LY180 baseplate assembly protein YP_008567118.1 4271826 D 1335916 CDS YP_008567119.1 544392353 16981761 4272727..4273257 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 4273257 16981761 LY180_20470 Escherichia coli LY180 tail protein YP_008567119.1 4272727 D 1335916 CDS YP_008567120.1 544393245 16981762 4273268..4275277 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; phage tail protein 4275277 16981762 LY180_20475 Escherichia coli LY180 phage tail protein YP_008567120.1 4273268 D 1335916 CDS YP_008567121.1 544392354 16981763 4275281..4275808 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail fiber assembly protein 4275808 16981763 LY180_20480 Escherichia coli LY180 tail fiber assembly protein YP_008567121.1 4275281 D 1335916 CDS YP_008567122.1 544393246 16981764 4276024..4276923 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4276923 16981764 LY180_20485 Escherichia coli LY180 hypothetical protein YP_008567122.1 4276024 D 1335916 CDS YP_008567123.1 544392355 16981765 4277243..4278433 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail sheath protein 4278433 16981765 LY180_20490 Escherichia coli LY180 tail sheath protein YP_008567123.1 4277243 D 1335916 CDS YP_008567124.1 544392356 16981766 4278446..4278964 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; major tail tube protein 4278964 16981766 LY180_20495 Escherichia coli LY180 major tail tube protein YP_008567124.1 4278446 D 1335916 CDS YP_008567125.1 544392357 16981767 4279021..4279296 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4279296 16981767 LY180_20500 Escherichia coli LY180 hypothetical protein YP_008567125.1 4279021 D 1335916 CDS YP_008567126.1 544392358 16981768 4279293..4279448 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 4279448 16981768 LY180_20505 Escherichia coli LY180 tail protein YP_008567126.1 4279293 D 1335916 CDS YP_008567127.1 544392359 16981769 4279441..4281888 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 4281888 16981769 LY180_20510 Escherichia coli LY180 tail protein YP_008567127.1 4279441 D 1335916 CDS YP_008567128.1 544392360 16981770 4281903..4282382 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail assembly protein 4282382 16981770 LY180_20515 Escherichia coli LY180 tail assembly protein YP_008567128.1 4281903 D 1335916 CDS YP_008567129.1 544392361 16981771 4282382..4283545 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; late control protein D 4283545 16981771 LY180_20520 Escherichia coli LY180 late control protein D YP_008567129.1 4282382 D 1335916 CDS YP_008567130.1 544392362 16981772 4283564..4283845 1 NC_022364.1 in E. coli K-12 this is in prophage P2 remnant; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4283845 16981772 LY180_20525 Escherichia coli LY180 transcriptional regulator YP_008567130.1 4283564 D 1335916 CDS YP_008567131.1 544392363 16981773 4284082..4284984 1 NC_022364.1 member of cation diffusion facilitator family; CDF; membrane-bound; induced by both zinc and iron, but does not induce resistance to zinc; can transport zinc(II) in a proton-dependent manner; instead this protein induces iron resistance; forms dimers; Derived by automated computational analysis using gene prediction method: Protein Homology.; iron transporter 4284984 fieF 16981773 fieF Escherichia coli LY180 iron transporter YP_008567131.1 4284082 D 1335916 CDS YP_008567132.1 544392364 16981774 4285165..4286127 1 NC_022364.1 catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis; Derived by automated computational analysis using gene prediction method: Protein Homology.; 6-phosphofructokinase 4286127 16981774 LY180_20535 Escherichia coli LY180 6-phosphofructokinase YP_008567132.1 4285165 D 1335916 CDS YP_008567133.1 544392365 16981776 4286447..4287436 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sulfate transporter subunit 4287436 16981776 LY180_20545 Escherichia coli LY180 sulfate transporter subunit YP_008567133.1 4286447 D 1335916 CDS YP_008567134.1 544392366 16981777 4287543..4288298 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; CDP-diacylglycerol pyrophosphatase 4288298 16981777 LY180_20550 Escherichia coli LY180 CDP-diacylglycerol pyrophosphatase YP_008567134.1 4287543 D 1335916 CDS YP_008567135.1 544392367 16981778 complement(4288353..4289120) 1 NC_022364.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; triosephosphate isomerase 4289120 16981778 LY180_20555 Escherichia coli LY180 triosephosphate isomerase YP_008567135.1 4288353 R 1335916 CDS YP_008567136.1 544392368 16981779 complement(4289228..4289827) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4289827 16981779 LY180_20560 Escherichia coli LY180 hypothetical protein YP_008567136.1 4289228 R 1335916 CDS YP_008567137.1 544392369 16981780 4289928..4290368 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4290368 16981780 LY180_20565 Escherichia coli LY180 membrane protein YP_008567137.1 4289928 D 1335916 CDS YP_008567138.1 544392370 16981781 4290580..4290879 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4290879 16981781 LY180_20570 Escherichia coli LY180 hypothetical protein YP_008567138.1 4290580 D 1335916 CDS YP_008567139.1 544392371 16981782 4290906..4291334 1 NC_022364.1 with UspC and Usp E is involved in resistance to UV radiation; Derived by automated computational analysis using gene prediction method: Protein Homology.; universal stress protein D 4291334 16981782 LY180_20575 Escherichia coli LY180 universal stress protein D YP_008567139.1 4290906 D 1335916 CDS YP_008567140.1 544392372 16981783 complement(4291339..4292085) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ferredoxin-NADP reductase 4292085 16981783 LY180_20580 Escherichia coli LY180 ferredoxin-NADP reductase YP_008567140.1 4291339 R 1335916 CDS YP_008567141.1 544392373 16981784 complement(4292182..4293192) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fructose 1,6-bisphosphatase 4293192 16981784 LY180_20585 Escherichia coli LY180 fructose 1,6-bisphosphatase YP_008567141.1 4292182 R 1335916 CDS YP_008567142.1 544392374 16981785 complement(4293328..4294836) 1 NC_022364.1 Converts glycerol and ADP to glycerol-3-phosphate and ADP; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycerol kinase 4294836 glpK 16981785 glpK Escherichia coli LY180 glycerol kinase YP_008567142.1 4293328 R 1335916 CDS YP_008567143.1 544392375 16981786 complement(4294859..4295704) 1 NC_022364.1 involved in the transport of glycerol into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycerol uptake facilitator GlpF 4295704 16981786 LY180_20595 Escherichia coli LY180 glycerol uptake facilitator GlpF YP_008567143.1 4294859 R 1335916 CDS YP_008567144.1 544392376 16981787 4296129..4296374 1 NC_022364.1 interacts with FisZ and is necessary for Z-ring formation; Derived by automated computational analysis using gene prediction method: Protein Homology.; septal ring assembly protein ZapB 4296374 16981787 LY180_20600 Escherichia coli LY180 septal ring assembly protein ZapB YP_008567144.1 4296129 D 1335916 CDS YP_008567145.1 544392377 16981788 complement(4296459..4296944) 1 NC_022364.1 regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonuclease activity regulator protein RraA 4296944 16981788 LY180_20605 Escherichia coli LY180 ribonuclease activity regulator protein RraA YP_008567145.1 4296459 R 1335916 CDS YP_008567146.1 544392378 16981789 complement(4297037..4297963) 1 NC_022364.1 catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 1,4-dihydroxy-2-naphthoate prenyltransferase 4297963 16981789 LY180_20610 Escherichia coli LY180 1,4-dihydroxy-2-naphthoate prenyltransferase YP_008567146.1 4297037 R 1335916 CDS YP_008567147.1 544392379 16981790 complement(4298030..4299361) 1 NC_022364.1 heat shock protein involved in degradation of misfolded proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-dependent protease 4299361 hslU 16981790 hslU Escherichia coli LY180 ATP-dependent protease YP_008567147.1 4298030 R 1335916 CDS YP_008567148.1 544392380 16981791 complement(4299371..4299901) 1 NC_022364.1 heat shock protein involved in degradation of misfolded proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-dependent protease 4299901 16981791 LY180_20620 Escherichia coli LY180 ATP-dependent protease YP_008567148.1 4299371 R 1335916 CDS YP_008567149.1 544392381 16981792 complement(4299994..4300953) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division protein FtsN 4300953 16981792 LY180_20625 Escherichia coli LY180 cell division protein FtsN YP_008567149.1 4299994 R 1335916 CDS YP_008567150.1 544392382 16981793 complement(4301045..4302070) 1 NC_022364.1 negatively controls the transcription initiation of genes such as deoCABD, udp, and cdd encoding catabolizing enzymes and nupC, nupG, and tsx encoding transporting and pore-forming proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4302070 16981793 LY180_20630 Escherichia coli LY180 transcriptional regulator YP_008567150.1 4301045 R 1335916 CDS YP_008567151.1 544392383 16981794 complement(4302226..4304424) 1 NC_022364.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.; primosome assembly protein PriA 4304424 16981794 LY180_20635 Escherichia coli LY180 primosome assembly protein PriA YP_008567151.1 4302226 R 1335916 CDS YP_008567152.1 544392384 16981795 4304627..4304839 1 NC_022364.1 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L31 4304839 rpmE 16981795 rpmE Escherichia coli LY180 50S ribosomal protein L31 YP_008567152.1 4304627 D 1335916 CDS YP_008567153.1 544393247 16981796 4304999..4309171 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; rhsA 4309171 16981796 LY180_20645 Escherichia coli LY180 rhsA YP_008567153.1 4304999 D 1335916 CDS YP_008567154.1 544393248 16981797 4309463..4309741 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4309741 16981797 LY180_20650 Escherichia coli LY180 hypothetical protein YP_008567154.1 4309463 D 1335916 CDS YP_008567155.1 544392385 16981798 complement(4310403..4311011) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4311011 16981798 LY180_20655 Escherichia coli LY180 hypothetical protein YP_008567155.1 4310403 R 1335916 CDS YP_008567156.1 544393249 16981799 complement(4311246..4312226) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4312226 16981799 LY180_20660 Escherichia coli LY180 hypothetical protein YP_008567156.1 4311246 R 1335916 CDS YP_008567157.1 544392386 16981800 complement(4312474..4312791) 1 NC_022364.1 when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4312791 16981800 LY180_20665 Escherichia coli LY180 transcriptional regulator YP_008567157.1 4312474 R 1335916 CDS YP_008567158.1 544392387 16981801 4313068..4314228 1 NC_022364.1 catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine; Derived by automated computational analysis using gene prediction method: Protein Homology.; cystathionine gamma-synthase 4314228 16981801 LY180_20670 Escherichia coli LY180 cystathionine gamma-synthase YP_008567158.1 4313068 D 1335916 CDS YP_008567159.1 544392388 16981802 4314231..4316663 1 NC_022364.1 multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional aspartate kinase II/homoserine dehydrogenase II 4316663 metL 16981802 metL Escherichia coli LY180 bifunctional aspartate kinase II/homoserine dehydrogenase II YP_008567159.1 4314231 D 1335916 CDS YP_008567160.1 544393250 16981803 complement(4316802..4316936) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4316936 16981803 LY180_20680 Escherichia coli LY180 hypothetical protein YP_008567160.1 4316802 R 1335916 CDS YP_008567161.1 544392389 16981804 4317012..4317902 1 NC_022364.1 MTHFR; catalyzes NADH-linked reduction of 5,10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor; Derived by automated computational analysis using gene prediction method: Protein Homology.; 5,10-methylenetetrahydrofolate reductase 4317902 metF 16981804 metF Escherichia coli LY180 5,10-methylenetetrahydrofolate reductase YP_008567161.1 4317012 D 1335916 CDS YP_008567162.1 544392390 16981805 4318231..4320411 1 NC_022364.1 has catalase and peroxidase activities; Derived by automated computational analysis using gene prediction method: Protein Homology.; catalase/hydroperoxidase HPI(I) 4320411 16981805 LY180_20690 Escherichia coli LY180 catalase/hydroperoxidase HPI(I) YP_008567162.1 4318231 D 1335916 CDS YP_008567163.1 544392391 16981806 4320505..4321410 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; permease 4321410 16981806 LY180_20695 Escherichia coli LY180 permease YP_008567163.1 4320505 D 1335916 CDS YP_008567164.1 544392392 16981807 complement(4321437..4322054) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4322054 16981807 LY180_20700 Escherichia coli LY180 hypothetical protein YP_008567164.1 4321437 R 1335916 CDS YP_008567165.1 544392393 16981809 complement(4322329..4323432) 1 NC_022364.1 forms dimers and octamers; involved in conversion of glycerol to dihydroxy-acetone; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycerol dehydrogenase 4323432 gldA 16981809 gldA Escherichia coli LY180 glycerol dehydrogenase YP_008567165.1 4322329 R 1335916 CDS YP_008567166.1 544392394 16981810 complement(4323443..4324105) 1 NC_022364.1 similar to transaldolase from Escherichia coli; many organisms have multiple copies; Derived by automated computational analysis using gene prediction method: Protein Homology.; fructose-bisphosphate aldolase 4324105 16981810 LY180_20715 Escherichia coli LY180 fructose-bisphosphate aldolase YP_008567166.1 4323443 R 1335916 CDS YP_008567167.1 544392395 16981811 complement(4324117..4326618) 1 NC_022364.1 Phosphotransferase system, enzyme I; transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein HPr; HPr transfers the phosphoryl group to subunit A; subunit IIA transfers a phosphoryl group to subunit IIB; subunit IIB transfers the phosphoryl group to the substrate; part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active-transport system; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS fructose transporter subunit IIA 4326618 16981811 LY180_20720 Escherichia coli LY180 PTS fructose transporter subunit IIA YP_008567167.1 4324117 R 1335916 CDS YP_008567168.1 544392396 16981812 4326927..4328006 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS fructose transporter subunit IIC 4328006 16981812 LY180_20725 Escherichia coli LY180 PTS fructose transporter subunit IIC YP_008567168.1 4326927 D 1335916 CDS YP_008567169.1 544392397 16981813 4328021..4328341 1 NC_022364.1 FrwB with FrwC, FrwD and PtsA forms a PEP-dependent sugar phosphotransferase system (PTS) permease which may phosphorylate and transport sugars into the cell; cytoplasmic protein that interacts with complex EIIA; contains the second phosphorylation site of the PTS; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS fructose transporter subunit IIB 4328341 16981813 LY180_20730 Escherichia coli LY180 PTS fructose transporter subunit IIB YP_008567169.1 4328021 D 1335916 CDS YP_008567170.1 544392398 16981814 4328392..4330689 1 NC_022364.1 involved in production of D-lactate from glucose under microaerobic conditions; cytoplasmic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; formate acetyltransferase 4330689 pflD 16981814 pflD Escherichia coli LY180 formate acetyltransferase YP_008567170.1 4328392 D 1335916 CDS YP_008567171.1 544392399 16981815 4330655..4331533 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; pyruvate formate lyase II activase 4331533 16981815 LY180_20740 Escherichia coli LY180 pyruvate formate lyase II activase YP_008567171.1 4330655 D 1335916 CDS YP_008567172.1 544392400 16981816 4331535..4331876 1 NC_022364.1 FrwD with FrwB, FrwC and PtsA forms a PEP-dependent sugar phosphotransferase system permease which may phosphorylate and transport sugars into the cell; phosphorylated by EIIA; FrwB homolog; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS fructose transporter subunit IIB 4331876 16981816 LY180_20745 Escherichia coli LY180 PTS fructose transporter subunit IIB YP_008567172.1 4331535 D 1335916 CDS YP_008567173.1 544392401 16981817 complement(4331863..4332714) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; AraC family transcriptional regulator 4332714 16981817 LY180_20750 Escherichia coli LY180 AraC family transcriptional regulator YP_008567173.1 4331863 R 1335916 CDS YP_008567174.1 544392402 16981818 complement(4332863..4334596) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4334596 16981818 LY180_20755 Escherichia coli LY180 membrane protein YP_008567174.1 4332863 R 1335916 CDS YP_008567175.1 544392403 16981819 complement(4334779..4337430) 1 NC_022364.1 catalyzes the formation of oxaloacetate from phosphoenolpyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoenolpyruvate carboxylase 4337430 16981819 LY180_20760 Escherichia coli LY180 phosphoenolpyruvate carboxylase YP_008567175.1 4334779 R 1335916 CDS YP_008567176.1 544392404 16981820 complement(4337782..4338933) 1 NC_022364.1 catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; acetylornithine deacetylase 4338933 16981820 LY180_20765 Escherichia coli LY180 acetylornithine deacetylase YP_008567176.1 4337782 R 1335916 CDS YP_008567177.1 544392405 16981821 4339087..4340091 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; N-acetyl-gamma-glutamyl-phosphate reductase 4340091 16981821 LY180_20770 Escherichia coli LY180 N-acetyl-gamma-glutamyl-phosphate reductase YP_008567177.1 4339087 D 1335916 CDS YP_008567178.1 544392406 16981822 4340102..4340875 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acetylglutamate kinase 4340875 16981822 LY180_20775 Escherichia coli LY180 acetylglutamate kinase YP_008567178.1 4340102 D 1335916 CDS YP_008567179.1 544392407 16981823 4340936..4342309 1 NC_022364.1 catalyzes the formation of arginine from (N-L-arginino)succinate; Derived by automated computational analysis using gene prediction method: Protein Homology.; argininosuccinate lyase 4342309 16981823 LY180_20780 Escherichia coli LY180 argininosuccinate lyase YP_008567179.1 4340936 D 1335916 CDS YP_008567180.1 544392408 16981824 4342576..4343493 1 NC_022364.1 Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG, gor, ahpC, ahpF, oxyS, dps, fur and grxA; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4343493 16981824 LY180_20785 Escherichia coli LY180 transcriptional regulator YP_008567180.1 4342576 D 1335916 CDS YP_008567181.1 544392409 16981825 complement(4343476..4344876) 1 NC_022364.1 catalyzes the conversion of NADPH to NADH; Derived by automated computational analysis using gene prediction method: Protein Homology.; soluble pyridine nucleotide transhydrogenase 4344876 16981825 LY180_20790 Escherichia coli LY180 soluble pyridine nucleotide transhydrogenase YP_008567181.1 4343476 R 1335916 CDS YP_008567182.1 544392410 16981826 4345153..4345857 1 NC_022364.1 negatively controls the expression of fabA and fabB, genes involved in the unsaturated fatty acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4345857 16981826 LY180_20795 Escherichia coli LY180 transcriptional regulator YP_008567182.1 4345153 D 1335916 CDS YP_008567183.1 544392411 16981827 4345857..4346216 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4346216 16981827 LY180_20800 Escherichia coli LY180 membrane protein YP_008567183.1 4345857 D 1335916 CDS YP_008567184.1 544392412 16981828 complement(4346256..4347356) 1 NC_022364.1 catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA (uracil-5-)-methyltransferase 4347356 16981828 LY180_20805 Escherichia coli LY180 tRNA (uracil-5-)-methyltransferase YP_008567184.1 4346256 R 1335916 CDS YP_008567185.1 544392413 16981829 4347725..4349569 1 NC_022364.1 involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space; Derived by automated computational analysis using gene prediction method: Protein Homology.; vitamin B12/cobalamin outer membrane transporter 4349569 btuB 16981829 btuB Escherichia coli LY180 vitamin B12/cobalamin outer membrane transporter YP_008567185.1 4347725 D 1335916 CDS YP_008567186.1 544393251 16981830 4349583..4350371 1 NC_022364.1 converts L-glutamate to D-glutamate, a component of peptidoglycan; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; glutamate racemase 4350371 16981830 LY180_20815 Escherichia coli LY180 glutamate racemase YP_008567186.1 4349583 D 1335916 CDS YP_008567187.1 544392414 16981835 4356142..4357170 1 NC_022364.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP-N-acetylenolpyruvoylglucosamine reductase 4357170 murB 16981835 murB Escherichia coli LY180 UDP-N-acetylenolpyruvoylglucosamine reductase YP_008567187.1 4356142 D 1335916 CDS YP_008567188.1 544392415 16981836 4357167..4358132 1 NC_022364.1 catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon; Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor 4358132 16981836 LY180_20845 Escherichia coli LY180 bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor YP_008567188.1 4357167 D 1335916 CDS YP_008567189.1 544392416 16981837 complement(4358161..4359111) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; pantothenate kinase 4359111 16981837 LY180_20850 Escherichia coli LY180 pantothenate kinase YP_008567189.1 4358161 R 1335916 CDS YP_008567190.1 544393252 16981842 4360029..4361213 1 NC_022364.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; elongation factor Tu 4361213 tuf 16981842 tuf Escherichia coli LY180 elongation factor Tu YP_008567190.1 4360029 D 1335916 CDS YP_008567191.1 544392417 16981843 4361443..4361826 1 NC_022364.1 forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; Derived by automated computational analysis using gene prediction method: Protein Homology.; preprotein translocase subunit SecE 4361826 secE 16981843 secE Escherichia coli LY180 preprotein translocase subunit SecE YP_008567191.1 4361443 D 1335916 CDS YP_008567192.1 544392418 16981844 4361828..4362373 1 NC_022364.1 Modulates Rho-dependent transcription termination; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcription antitermination protein NusG 4362373 nusG 16981844 nusG Escherichia coli LY180 transcription antitermination protein NusG YP_008567192.1 4361828 D 1335916 CDS YP_008567193.1 544392419 16981845 4362532..4362960 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L11 4362960 16981845 LY180_20890 Escherichia coli LY180 50S ribosomal protein L11 YP_008567193.1 4362532 D 1335916 CDS YP_008567194.1 544392420 16981846 4362964..4363668 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L1 4363668 16981846 LY180_20895 Escherichia coli LY180 50S ribosomal protein L1 YP_008567194.1 4362964 D 1335916 CDS YP_008567195.1 544392421 16981847 4364081..4364578 1 NC_022364.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L10 4364578 rplJ 16981847 rplJ Escherichia coli LY180 50S ribosomal protein L10 YP_008567195.1 4364081 D 1335916 CDS YP_008567196.1 544392422 16981848 4364645..4365010 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L7/L12 4365010 16981848 LY180_20905 Escherichia coli LY180 50S ribosomal protein L7/L12 YP_008567196.1 4364645 D 1335916 CDS YP_008567197.1 544392423 16981849 4365330..4369358 1 NC_022364.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA-directed RNA polymerase subunit beta 4369358 rpoB 16981849 rpoB Escherichia coli LY180 DNA-directed RNA polymerase subunit beta YP_008567197.1 4365330 D 1335916 CDS YP_008567198.1 544392424 16981850 4369435..4373658 1 NC_022364.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA-directed RNA polymerase subunit beta' 4373658 16981850 LY180_20915 Escherichia coli LY180 DNA-directed RNA polymerase subunit beta' YP_008567198.1 4369435 D 1335916 CDS YP_008567199.1 544392425 16981851 complement(4373899..4375032) 1 NC_022364.1 in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; Derived by automated computational analysis using gene prediction method: Protein Homology.; thiamine biosynthesis protein ThiH 4375032 thiH 16981851 thiH Escherichia coli LY180 thiamine biosynthesis protein ThiH YP_008567199.1 4373899 R 1335916 CDS YP_008567200.1 544392426 16981852 complement(4375029..4375799) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; thiazole synthase 4375799 16981852 LY180_20925 Escherichia coli LY180 thiazole synthase YP_008567200.1 4375029 R 1335916 CDS YP_008567201.1 544392427 16981853 complement(4375801..4376001) 1 NC_022364.1 with ThiF, ThiG, and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; sulfur carrier protein ThiS 4376001 16981853 LY180_20930 Escherichia coli LY180 sulfur carrier protein ThiS YP_008567201.1 4375801 R 1335916 CDS YP_008567202.1 544392428 16981854 complement(4375985..4376740) 1 NC_022364.1 ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.; molybdopterin biosynthesis protein MoeB 4376740 16981854 LY180_20935 Escherichia coli LY180 molybdopterin biosynthesis protein MoeB YP_008567202.1 4375985 R 1335916 CDS YP_008567203.1 544392429 16981855 complement(4376733..4377368) 1 NC_022364.1 catalyzes the formation of thiamine monophosphate from 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; thiamine-phosphate pyrophosphorylase 4377368 16981855 LY180_20940 Escherichia coli LY180 thiamine-phosphate pyrophosphorylase YP_008567203.1 4376733 R 1335916 CDS YP_008567204.1 544392430 16981856 complement(4377368..4379263) 1 NC_022364.1 catalyzes the formation of 4-amino-2-methyl-5-phosphomethylpyrimidine from 5-amino-1-(5-phospho-D-ribosyl)imidazole and S-adenosyl-L-methionine in thiamine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphomethylpyrimidine synthase ThiC 4379263 16981856 LY180_20945 Escherichia coli LY180 phosphomethylpyrimidine synthase ThiC YP_008567204.1 4377368 R 1335916 CDS YP_008567205.1 544392431 16981857 complement(4379496..4379972) 1 NC_022364.1 binds specifically to the major sigma factor sigma 70; active in stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology.; anti-RNA polymerase sigma 70 factor 4379972 16981857 LY180_20950 Escherichia coli LY180 anti-RNA polymerase sigma 70 factor YP_008567205.1 4379496 R 1335916 CDS YP_008567206.1 544392432 16981858 4380067..4380840 1 NC_022364.1 can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH; requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates; Derived by automated computational analysis using gene prediction method: Protein Homology.; NADH pyrophosphatase 4380840 nudC 16981858 nudC Escherichia coli LY180 NADH pyrophosphatase YP_008567206.1 4380067 D 1335916 CDS YP_008567207.1 544392433 16981859 4380880..4381944 1 NC_022364.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; Derived by automated computational analysis using gene prediction method: Protein Homology.; uroporphyrinogen decarboxylase 4381944 hemE 16981859 hemE Escherichia coli LY180 uroporphyrinogen decarboxylase YP_008567207.1 4380880 D 1335916 CDS YP_008567208.1 544392434 16981860 4381954..4382625 1 NC_022364.1 Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA; cleaves DNA containing urea residues, AP sites, base mismatches, insertion/deletion mismatches, flaps, and pseudo-Y structures; Derived by automated computational analysis using gene prediction method: Protein Homology.; endonuclease VIII 4382625 16981860 LY180_20965 Escherichia coli LY180 endonuclease VIII YP_008567208.1 4381954 D 1335916 CDS YP_008567209.1 544392435 16981861 4382668..4383258 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4383258 16981861 LY180_20970 Escherichia coli LY180 hypothetical protein YP_008567209.1 4382668 D 1335916 CDS YP_008567210.1 544392436 16981862 4383445..4383717 1 NC_022364.1 histone-like DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4383717 16981862 LY180_20975 Escherichia coli LY180 transcriptional regulator YP_008567210.1 4383445 D 1335916 CDS YP_008567211.1 544392437 16981863 4383724..4384425 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4384425 16981863 LY180_20980 Escherichia coli LY180 membrane protein YP_008567211.1 4383724 D 1335916 CDS YP_008567212.1 544392438 16981864 complement(4384427..4384852) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; zinc resistance protein 4384852 zraP 16981864 zraP Escherichia coli LY180 zinc resistance protein YP_008567212.1 4384427 R 1335916 CDS YP_008567213.1 544392439 16981865 4385090..4386466 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sensor protein ZraS 4386466 16981865 LY180_20990 Escherichia coli LY180 sensor protein ZraS YP_008567213.1 4385090 D 1335916 CDS YP_008567214.1 544392440 16981866 4386463..4387788 1 NC_022364.1 DNA-binding response regulator in two-component regulatory system with ZraS; response regulator/sigma54 interaction protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; acetoacetate metabolism regulatory protein AtoC 4387788 16981866 LY180_20995 Escherichia coli LY180 acetoacetate metabolism regulatory protein AtoC YP_008567214.1 4386463 D 1335916 CDS YP_008567215.1 544392441 16981867 complement(4387785..4389074) 1 NC_022364.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoribosylamine--glycine ligase 4389074 16981867 LY180_21000 Escherichia coli LY180 phosphoribosylamine--glycine ligase YP_008567215.1 4387785 R 1335916 CDS YP_008567216.1 544392442 16981868 complement(4389086..4390675) 1 NC_022364.1 involved in de novo purine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; purine biosynthesis protein purH 4390675 purH 16981868 purH Escherichia coli LY180 purine biosynthesis protein purH YP_008567216.1 4389086 R 1335916 CDS YP_008567217.1 544393253 16981871 4394929..4396635 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; pyruvate decarboxylase 4396635 16981871 LY180_21020 Escherichia coli LY180 pyruvate decarboxylase YP_008567217.1 4394929 D 1335916 CDS YP_008567218.1 544392443 16981872 4396785..4397798 1 NC_022364.1 similar to zinc-dependent eukaryotic ADH enzymes and distinct from fermentative ADHs; Derived by automated computational analysis using gene prediction method: Protein Homology.; acetaldehyde reductase 4397798 adhP 16981872 adhP Escherichia coli LY180 acetaldehyde reductase YP_008567218.1 4396785 D 1335916 CDS YP_008567219.1 544392444 16981873 4397852..4399003 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; alcohol dehydrogenase 4399003 16981873 LY180_21030 Escherichia coli LY180 alcohol dehydrogenase YP_008567219.1 4397852 D 1335916 CDS YP_008567220.1 544393254 16981874 4399525..4399644 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4399644 16981874 LY180_21035 Escherichia coli LY180 hypothetical protein YP_008567220.1 4399525 D 1335916 CDS YP_008567221.1 544393255 16981875 4399648..4399743 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4399743 16981875 LY180_21040 Escherichia coli LY180 hypothetical protein YP_008567221.1 4399648 D 1335916 CDS YP_008567222.1 544392445 16981877 complement(4401022..4401465) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acetyltransferase 4401465 16981877 LY180_21050 Escherichia coli LY180 acetyltransferase YP_008567222.1 4401022 R 1335916 CDS YP_008567223.1 544392446 16981878 4401622..4402551 1 NC_022364.1 catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; homoserine O-succinyltransferase 4402551 16981878 LY180_21055 Escherichia coli LY180 homoserine O-succinyltransferase YP_008567223.1 4401622 D 1335916 CDS YP_008567224.1 544392447 16981879 4402820..4404421 1 NC_022364.1 Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle; Derived by automated computational analysis using gene prediction method: Protein Homology.; malate synthase 4404421 16981879 LY180_21060 Escherichia coli LY180 malate synthase YP_008567224.1 4402820 D 1335916 CDS YP_008567225.1 544392448 16981880 4404451..4405755 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; isocitrate lyase 4405755 16981880 LY180_21065 Escherichia coli LY180 isocitrate lyase YP_008567225.1 4404451 D 1335916 CDS YP_008567226.1 544392449 16981881 4405938..4407674 1 NC_022364.1 catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity; unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol; Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional isocitrate dehydrogenase kinase/phosphatase 4407674 aceK 16981881 aceK Escherichia coli LY180 bifunctional isocitrate dehydrogenase kinase/phosphatase YP_008567226.1 4405938 D 1335916 CDS YP_008567227.1 544392450 16981882 complement(4407643..4409217) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ankyrin 4409217 16981882 LY180_21075 Escherichia coli LY180 ankyrin YP_008567227.1 4407643 R 1335916 CDS YP_008567228.1 544392451 16981883 complement(4409534..4410358) 1 NC_022364.1 regulates the glyoxylate bypass operon (aceBAK), which encodes isocitrate lyase, malate synthase and isocitrate dehydrogenase kinase/phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.; IclR family transcriptional regulator 4410358 16981883 LY180_21080 Escherichia coli LY180 IclR family transcriptional regulator YP_008567228.1 4409534 R 1335916 CDS YP_008567229.1 544392452 16981884 4410558..4414241 1 NC_022364.1 one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; Derived by automated computational analysis using gene prediction method: Protein Homology.; B12-dependent methionine synthase 4414241 metH 16981884 metH Escherichia coli LY180 B12-dependent methionine synthase YP_008567229.1 4410558 D 1335916 CDS YP_008567230.1 544392453 16981885 4414461..4416092 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4416092 16981885 LY180_21090 Escherichia coli LY180 membrane protein YP_008567230.1 4414461 D 1335916 CDS YP_008567231.1 544392454 16981886 complement(4416183..4416872) 1 NC_022364.1 peptidase E; catalyzes the hydrolysis of dipeptides with an N-terminal aspartate residue; belongs to peptidase S51 family; Derived by automated computational analysis using gene prediction method: Protein Homology.; (alpha)-aspartyl dipeptidase 4416872 16981886 LY180_21095 Escherichia coli LY180 (alpha)-aspartyl dipeptidase YP_008567231.1 4416183 R 1335916 CDS YP_008567232.1 544392455 16981887 4417084..4417956 1 NC_022364.1 catalyzes the synthesis of pseudouridine from U-2604 in the 23S ribosomal RNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; 23S rRNA pseudouridine synthase F 4417956 16981887 LY180_21100 Escherichia coli LY180 23S rRNA pseudouridine synthase F YP_008567232.1 4417084 D 1335916 CDS YP_008567233.1 544392456 16981888 complement(4417957..4418229) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4418229 16981888 LY180_21105 Escherichia coli LY180 hypothetical protein YP_008567233.1 4417957 R 1335916 CDS YP_008567234.1 544393256 16981889 4418759..4419886 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4419886 16981889 LY180_21110 Escherichia coli LY180 hypothetical protein YP_008567234.1 4418759 D 1335916 CDS YP_008567235.1 544393257 16981890 4419892..4420683 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; nucleotidyltransferase 4420683 16981890 LY180_21115 Escherichia coli LY180 nucleotidyltransferase YP_008567235.1 4419892 D 1335916 CDS YP_008567236.1 544393258 16981891 complement(4420719..4421645) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; zeta toxin; poison-antidote element 4421645 16981891 LY180_21120 Escherichia coli LY180 zeta toxin; poison-antidote element YP_008567236.1 4420719 R 1335916 CDS YP_008567237.1 544392457 16981892 complement(4421790..4423139) 1 NC_022364.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; functions in amino acid biosynthesis; lysine sensitive; Derived by automated computational analysis using gene prediction method: Protein Homology.; aspartate kinase 4423139 16981892 LY180_21125 Escherichia coli LY180 aspartate kinase YP_008567237.1 4421790 R 1335916 CDS YP_008567238.1 544392458 16981893 4423664..4425313 1 NC_022364.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; Derived by automated computational analysis using gene prediction method: Protein Homology.; glucose-6-phosphate isomerase 4425313 pgi 16981893 pgi Escherichia coli LY180 glucose-6-phosphate isomerase YP_008567238.1 4423664 D 1335916 CDS YP_008567239.1 544392459 16981894 4425668..4425910 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4425910 16981894 LY180_21135 Escherichia coli LY180 hypothetical protein YP_008567239.1 4425668 D 1335916 CDS YP_008567240.1 544392460 16981895 4426024..4426662 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4426662 16981895 LY180_21140 Escherichia coli LY180 hypothetical protein YP_008567240.1 4426024 D 1335916 CDS YP_008567241.1 544392461 16981896 4426659..4427396 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4427396 16981896 LY180_21145 Escherichia coli LY180 hypothetical protein YP_008567241.1 4426659 D 1335916 CDS YP_008567242.1 544392462 16981897 4427396..4429492 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4429492 16981897 LY180_21150 Escherichia coli LY180 membrane protein YP_008567242.1 4427396 D 1335916 CDS YP_008567243.1 544393259 16981898 complement(4429539..4429817) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4429817 16981898 LY180_21155 Escherichia coli LY180 hypothetical protein YP_008567243.1 4429539 R 1335916 CDS YP_008567244.1 544393260 16981899 4429818..4429961 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4429961 16981899 LY180_21160 Escherichia coli LY180 hypothetical protein YP_008567244.1 4429818 D 1335916 CDS YP_008567245.1 544392463 16981900 4430087..4430497 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphate-starvation-inducible protein PsiE 4430497 16981900 LY180_21165 Escherichia coli LY180 phosphate-starvation-inducible protein PsiE YP_008567245.1 4430087 D 1335916 CDS YP_008567246.1 544392464 16981901 complement(4430541..4432016) 1 NC_022364.1 xylose/proton symporter; member of the major facilitator superfamily (MFS) of transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.; D-xylose transporter 4432016 xylE 16981901 xylE Escherichia coli LY180 D-xylose transporter YP_008567246.1 4430541 R 1335916 CDS YP_008567247.1 544392465 16981902 complement(4432388..4433278) 1 NC_022364.1 with MalKFE is involved in the transport of maltose into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; maltose transporter permease 4433278 malG 16981902 malG Escherichia coli LY180 maltose transporter permease YP_008567247.1 4432388 R 1335916 CDS YP_008567248.1 544392466 16981903 complement(4433293..4434837) 1 NC_022364.1 with MalKGE is involved in maltose transport into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; maltose transporter membrane protein 4434837 malF 16981903 malF Escherichia coli LY180 maltose transporter membrane protein YP_008567248.1 4433293 R 1335916 CDS YP_008567249.1 544392467 16981904 complement(4434991..4436181) 1 NC_022364.1 functions in the MalKFGE ABC transporter complex to transport maltose into the cell by using ATP hydrolysis; Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar ABC transporter substrate-binding protein 4436181 malE 16981904 malE Escherichia coli LY180 sugar ABC transporter substrate-binding protein YP_008567249.1 4434991 R 1335916 CDS YP_008567250.1 544393261 16981905 complement(4436274..4436369) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; sugar ABC transporter 4436369 16981905 LY180_21190 Escherichia coli LY180 sugar ABC transporter YP_008567250.1 4436274 R 1335916 CDS YP_008567251.1 544392468 16981906 4436546..4437661 1 NC_022364.1 with malEFG is involved in import of maltose/maltodextrin; Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar ABC transporter ATP-binding protein 4437661 16981906 LY180_21195 Escherichia coli LY180 sugar ABC transporter ATP-binding protein YP_008567251.1 4436546 D 1335916 CDS YP_008567252.1 544392469 16981907 4437733..4439073 1 NC_022364.1 porin involved in the transport of maltose and maltodextrins; Derived by automated computational analysis using gene prediction method: Protein Homology.; maltoporin 4439073 lamB 16981907 lamB Escherichia coli LY180 maltoporin YP_008567252.1 4437733 D 1335916 CDS YP_008567253.1 544392470 16981908 4439316..4440236 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; maltose operon protein 4440236 16981908 LY180_21205 Escherichia coli LY180 maltose operon protein YP_008567253.1 4439316 D 1335916 CDS YP_008567254.1 544393262 16981909 4440465..4440659 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4440659 16981909 LY180_21210 Escherichia coli LY180 hypothetical protein YP_008567254.1 4440465 D 1335916 CDS YP_008567255.1 544393263 16981910 4440750..4442045 1 NC_022364.1 in E. coli, some yjbl mutations have been reported as suppressors of dnaG mutations; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4442045 16981910 LY180_21215 Escherichia coli LY180 hypothetical protein YP_008567255.1 4440750 D 1335916 CDS YP_008567256.1 544392471 16981911 4442268..4442765 1 NC_022364.1 catalyzes the formation of 4-hydroxybenzoate from chorismate; Derived by automated computational analysis using gene prediction method: Protein Homology.; chorismate pyruvate lyase 4442765 ubiC 16981911 ubiC Escherichia coli LY180 chorismate pyruvate lyase YP_008567256.1 4442268 D 1335916 CDS YP_008567257.1 544392472 16981912 4442778..4443650 1 NC_022364.1 catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.; 4-hydroxybenzoate polyprenyltransferase 4443650 ubiA 16981912 ubiA Escherichia coli LY180 4-hydroxybenzoate polyprenyltransferase YP_008567257.1 4442778 D 1335916 CDS YP_008567258.1 544392473 16981913 complement(4443805..4446228) 1 NC_022364.1 PlsB; catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycerol-3-phosphate acyltransferase 4446228 16981913 LY180_21230 Escherichia coli LY180 glycerol-3-phosphate acyltransferase YP_008567258.1 4443805 R 1335916 CDS YP_008567259.1 544392474 16981914 4446399..4446767 1 NC_022364.1 catalyzes the phosphorylation of diacylglycerol to form diacylglycerol phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; diacylglycerol kinase 4446767 16981914 LY180_21235 Escherichia coli LY180 diacylglycerol kinase YP_008567259.1 4446399 D 1335916 CDS YP_008567260.1 544392475 16981915 4446877..4447485 1 NC_022364.1 Represses a number of genes involved in the response to DNA damage; Derived by automated computational analysis using gene prediction method: Protein Homology.; LexA repressor 4447485 16981915 LY180_21240 Escherichia coli LY180 LexA repressor YP_008567260.1 4446877 D 1335916 CDS YP_008567261.1 544392476 16981916 4447558..4448883 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA-damage-inducible protein 4448883 16981916 LY180_21245 Escherichia coli LY180 DNA-damage-inducible protein YP_008567261.1 4447558 D 1335916 CDS YP_008567262.1 544392477 16981917 4448999..4449208 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4449208 16981917 LY180_21250 Escherichia coli LY180 hypothetical protein YP_008567262.1 4448999 D 1335916 CDS YP_008567263.1 544392478 16981918 complement(4449250..4449765) 1 NC_022364.1 Acts as a negative controlling element, employing Zn(2+) as a cofactor to bind the operator of the repressed genes znuACB; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4449765 16981918 LY180_21255 Escherichia coli LY180 transcriptional regulator YP_008567263.1 4449250 R 1335916 CDS YP_008567264.1 544392479 16981919 4451487..4452506 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA-dihydrouridine synthase A 4452506 16981919 LY180_21270 Escherichia coli LY180 tRNA-dihydrouridine synthase A YP_008567264.1 4451487 D 1335916 CDS YP_008567265.1 544392480 16981920 4452640..4452882 1 NC_022364.1 coordinately regulated along with pspA; PspF-dependent induction in response to secretin overexpression in Yersinia; Derived by automated computational analysis using gene prediction method: Protein Homology.; phage-shock protein 4452882 pspG 16981920 pspG Escherichia coli LY180 phage-shock protein YP_008567265.1 4452640 D 1335916 CDS YP_008567266.1 544392481 16981921 complement(4453048..4454031) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; quinone oxidoreductase 4454031 16981921 LY180_21280 Escherichia coli LY180 quinone oxidoreductase YP_008567266.1 4453048 R 1335916 CDS YP_008567267.1 544392482 16981922 4454114..4455529 1 NC_022364.1 unwinds double stranded DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA helicase 4455529 16981922 LY180_21285 Escherichia coli LY180 DNA helicase YP_008567267.1 4454114 D 1335916 CDS YP_008567268.1 544392483 16981923 4455582..4456661 1 NC_022364.1 converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; Derived by automated computational analysis using gene prediction method: Protein Homology.; alanine racemase 4456661 alr 16981923 alr Escherichia coli LY180 alanine racemase YP_008567268.1 4455582 D 1335916 CDS YP_008567269.1 544392484 16981924 4456914..4458107 1 NC_022364.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.; aromatic amino acid aminotransferase 4458107 16981924 LY180_21295 Escherichia coli LY180 aromatic amino acid aminotransferase YP_008567269.1 4456914 D 1335916 CDS YP_008567270.1 544392485 16982297 4459213..4459926 1 NC_022364.1 Class B; non-specific; catalyzes the dephosphorylation of organic phosphomonoesters; also has phosphotransferase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphotransferase 4459926 aphA 16982297 aphA Escherichia coli LY180 phosphotransferase YP_008567270.1 4459213 D 1335916 CDS YP_008567271.1 544392486 16981926 4460037..4460453 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; thiamin phosphate synthase 4460453 16981926 LY180_21305 Escherichia coli LY180 thiamin phosphate synthase YP_008567271.1 4460037 D 1335916 CDS YP_008567272.1 544392487 16981927 4460457..4460813 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4460813 16981927 LY180_21310 Escherichia coli LY180 hypothetical protein YP_008567272.1 4460457 D 1335916 CDS YP_008567273.1 544392488 16981928 complement(4460848..4463670) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; excinuclease ABC subunit A 4463670 16981928 LY180_21315 Escherichia coli LY180 excinuclease ABC subunit A YP_008567273.1 4460848 R 1335916 CDS YP_008567274.1 544392489 16981929 4463924..4464460 1 NC_022364.1 binds to single stranded DNA and PriA helcase facilitate replication restart; Derived by automated computational analysis using gene prediction method: Protein Homology.; single-stranded DNA-binding protein 4464460 16981929 LY180_21320 Escherichia coli LY180 single-stranded DNA-binding protein YP_008567274.1 4463924 D 1335916 CDS YP_008567275.1 544392490 16981930 complement(4464559..4464840) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4464840 16981930 LY180_21325 Escherichia coli LY180 membrane protein YP_008567275.1 4464559 R 1335916 CDS YP_008567276.1 544392491 16981931 4465270..4466856 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4466856 16981931 LY180_21330 Escherichia coli LY180 membrane protein YP_008567276.1 4465270 D 1335916 CDS YP_008567277.1 544392492 16981932 complement(4466859..4467182) 1 NC_022364.1 regulates genes involved in response to oxidative stress; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4467182 16981932 LY180_21335 Escherichia coli LY180 transcriptional regulator YP_008567277.1 4466859 R 1335916 CDS YP_008567278.1 544392493 16981933 4467268..4467732 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4467732 16981933 LY180_21340 Escherichia coli LY180 transcriptional regulator YP_008567278.1 4467268 D 1335916 CDS YP_008567279.1 544392494 16981934 4468278..4469627 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; permase 4469627 16981934 LY180_21345 Escherichia coli LY180 permase YP_008567279.1 4468278 D 1335916 CDS YP_008567280.1 544392495 16981935 4469779..4471428 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sodium:proton antiporter 4471428 16981935 LY180_21350 Escherichia coli LY180 sodium:proton antiporter YP_008567280.1 4469779 D 1335916 CDS YP_008567281.1 544392496 16981936 complement(4471582..4472874) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4472874 16981936 LY180_21355 Escherichia coli LY180 hypothetical protein YP_008567281.1 4471582 R 1335916 CDS YP_008567282.1 544392497 16981937 complement(4473052..4474701) 1 NC_022364.1 member of the sodium:solute symporter family; cotranscribed with the acs gene which encodes acetyl coenzyme A synthase; mutations affect acetate uptake; Derived by automated computational analysis using gene prediction method: Protein Homology.; actetate permease 4474701 actP 16981937 actP Escherichia coli LY180 actetate permease YP_008567282.1 4473052 R 1335916 CDS YP_008567283.1 544392498 16981938 complement(4474698..4475012) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4475012 16981938 LY180_21365 Escherichia coli LY180 membrane protein YP_008567283.1 4474698 R 1335916 CDS YP_008567284.1 544392499 16981939 complement(4475212..4477170) 1 NC_022364.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.; acetyl-CoA synthetase 4477170 16981939 LY180_21370 Escherichia coli LY180 acetyl-CoA synthetase YP_008567284.1 4475212 R 1335916 CDS YP_008567285.1 544392500 16981940 4477563..4478999 1 NC_022364.1 catalyzes the formate-dependent reduction of nitrite to ammonia; cytochrome C552; Derived by automated computational analysis using gene prediction method: Protein Homology.; cytochrome C nitrite reductase subunit c552 4478999 nrfA 16981940 nrfA Escherichia coli LY180 cytochrome C nitrite reductase subunit c552 YP_008567285.1 4477563 D 1335916 CDS YP_008567286.1 544392501 16981941 4479044..4479610 1 NC_022364.1 part of nitrite reductase complex; NrfB is active at high nitrate conditions; NrfA, B, C, and D are essential for the formate-dependent nitrite reduction to ammonia; Derived by automated computational analysis using gene prediction method: Protein Homology.; cytochrome C nitrite reductase pentaheme subunit 4479610 16981941 LY180_21380 Escherichia coli LY180 cytochrome C nitrite reductase pentaheme subunit YP_008567286.1 4479044 D 1335916 CDS YP_008567287.1 544392502 16981942 4479607..4480278 1 NC_022364.1 4Fe4S subunit; may be involved in the transfer of electrons from quinones to the c-type cytochromes; Derived by automated computational analysis using gene prediction method: Protein Homology.; formate-dependent nitrite reductase subunit NrfC 4480278 16981942 LY180_21385 Escherichia coli LY180 formate-dependent nitrite reductase subunit NrfC YP_008567287.1 4479607 D 1335916 CDS YP_008567288.1 544392503 16981943 4480275..4481231 1 NC_022364.1 membrane protein, may be involved in the transfer of electrons from quinones to c-type cytochromes; Derived by automated computational analysis using gene prediction method: Protein Homology.; formate-dependent nitrite reductase subunit NrfD 4481231 16981943 LY180_21390 Escherichia coli LY180 formate-dependent nitrite reductase subunit NrfD YP_008567288.1 4480275 D 1335916 CDS YP_008567289.1 544392504 16981944 4481311..4482969 1 NC_022364.1 with NrfF and NrfG catalyzes the insertion of heme into cytochrome c552; Derived by automated computational analysis using gene prediction method: Protein Homology.; heme lyase subunit NrfE 4482969 16981944 LY180_21395 Escherichia coli LY180 heme lyase subunit NrfE YP_008567289.1 4481311 D 1335916 CDS YP_008567290.1 544392505 16981945 4482962..4483345 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrite reductase subunit F 4483345 16981945 LY180_21400 Escherichia coli LY180 nitrite reductase subunit F YP_008567290.1 4482962 D 1335916 CDS YP_008567291.1 544392506 16981946 4483342..4483938 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; formate-dependent nitrite reductase complex subunit NrfG 4483938 16981946 LY180_21405 Escherichia coli LY180 formate-dependent nitrite reductase complex subunit NrfG YP_008567291.1 4483342 D 1335916 CDS YP_008567292.1 544392507 16981947 4484280..4485593 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; proton glutamate symport protein 4485593 16981947 LY180_21410 Escherichia coli LY180 proton glutamate symport protein YP_008567292.1 4484280 D 1335916 CDS YP_008567293.1 544392508 16981948 complement(4486124..4486813) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4486813 16981948 LY180_21415 Escherichia coli LY180 hypothetical protein YP_008567293.1 4486124 R 1335916 CDS YP_008567294.1 544393264 16981949 complement(4486907..4488586) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4488586 16981949 LY180_21420 Escherichia coli LY180 hypothetical protein YP_008567294.1 4486907 R 1335916 CDS YP_008567295.1 544393265 16981950 complement(4488635..4489054) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; spermidine/putrescine ABC transporter substrate-binding protein 4489054 16981950 LY180_21425 Escherichia coli LY180 spermidine/putrescine ABC transporter substrate-binding protein YP_008567295.1 4488635 R 1335916 CDS YP_008567296.1 544392509 16981951 complement(4489252..4490718) 1 NC_022364.1 part of a multidrug efflux system involved in resistance to acriflavin, puromycin, erytjhromycin and tetraphenylarsonium chloride; member of the outer membrane factor (OMF) family; Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug RND transporter 4490718 16981951 LY180_21430 Escherichia coli LY180 multidrug RND transporter YP_008567296.1 4489252 R 1335916 CDS YP_008567297.1 544392510 16981952 complement(4490715..4492766) 1 NC_022364.1 possibly part of a tripartite efflux system composed of MdtN, MdtO and MdtP which could be involved in resistance to puromycin, acriflavine and tetraphenylarsonium chloride; Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug transporter 4492766 16981952 LY180_21435 Escherichia coli LY180 multidrug transporter YP_008567297.1 4490715 R 1335916 CDS YP_008567298.1 544392511 16981953 complement(4492766..4493797) 1 NC_022364.1 with MdtO and MdtP is involved in resistance to puromycin, acriflavine and tetraphenylarsonium chloride; Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug resistance protein MdtN 4493797 16981953 LY180_21440 Escherichia coli LY180 multidrug resistance protein MdtN YP_008567298.1 4492766 R 1335916 CDS YP_008567299.1 544392512 16981954 complement(4493816..4494091) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4494091 16981954 LY180_21445 Escherichia coli LY180 hypothetical protein YP_008567299.1 4493816 R 1335916 CDS YP_008567300.1 544393266 16982289 4496211..4497419 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4497419 16982289 LY180_21450 Escherichia coli LY180 hypothetical protein YP_008567300.1 4496211 D 1335916 CDS YP_008567301.1 544392513 16981956 complement(4497896..4498825) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; D-allose kinase 4498825 16981956 LY180_21455 Escherichia coli LY180 D-allose kinase YP_008567301.1 4497896 R 1335916 CDS YP_008567302.1 544392514 16981957 complement(4498809..4499504) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; allulose-6-phosphate 3-epimerase 4499504 16981957 LY180_21460 Escherichia coli LY180 allulose-6-phosphate 3-epimerase YP_008567302.1 4498809 R 1335916 CDS YP_008567303.1 544392515 16981958 complement(4499515..4500495) 1 NC_022364.1 functions to transport ribose at high affinity; forms a complex with RbsA2C2B; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribose ABC transporter permease 4500495 rbsC 16981958 rbsC Escherichia coli LY180 ribose ABC transporter permease YP_008567303.1 4499515 R 1335916 CDS YP_008567304.1 544392516 16981959 complement(4500474..4502006) 1 NC_022364.1 with RbsBCD acts to import ribose into the cell; RbsA contains 2 ATP-binding domain; Derived by automated computational analysis using gene prediction method: Protein Homology.; D-ribose transporter ATP binding protein 4502006 16981959 LY180_21470 Escherichia coli LY180 D-ribose transporter ATP binding protein YP_008567304.1 4500474 R 1335916 CDS YP_008567305.1 544392517 16981960 complement(4502133..4503068) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cytochrome C 4503068 16981960 LY180_21475 Escherichia coli LY180 cytochrome C YP_008567305.1 4502133 R 1335916 CDS YP_008567306.1 544392518 16981961 complement(4503127..4504017) 1 NC_022364.1 involved in rpiB and als operon repression; Derived by automated computational analysis using gene prediction method: Protein Homology.; RpiR family transcriptional regulator 4504017 16981961 LY180_21480 Escherichia coli LY180 RpiR family transcriptional regulator YP_008567306.1 4503127 R 1335916 CDS YP_008567307.1 544393267 16981962 4504078..4504182 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4504182 16981962 LY180_21485 Escherichia coli LY180 hypothetical protein YP_008567307.1 4504078 D 1335916 CDS YP_008567308.1 544392519 16981963 4504376..4504825 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ribose 5-phosphate isomerase 4504825 16981963 LY180_21490 Escherichia coli LY180 ribose 5-phosphate isomerase YP_008567308.1 4504376 D 1335916 CDS YP_008567309.1 544392520 16981964 4504894..4505223 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4505223 16981964 LY180_21495 Escherichia coli LY180 membrane protein YP_008567309.1 4504894 D 1335916 CDS YP_008567310.1 544392521 16981965 complement(4505370..4506128) 1 NC_022364.1 required for the use of phosphonates and phosphite as phosphorus sources; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphonate metabolism protein PhnP 4506128 phnP 16981965 phnP Escherichia coli LY180 phosphonate metabolism protein PhnP YP_008567310.1 4505370 R 1335916 CDS YP_008567311.1 544392522 16981966 complement(4506130..4506564) 1 NC_022364.1 PhnO in Salmonella enterica catalyzes the acetylation of a range of aminoalkylphosphonic acids; part of the biochemical pathway that enables the cell to use phosphonates as a phosphorus source; Escherichia coli uses a different mechanism of phosphonate catabolism where PhnO is not essential and seems to play a regulatory role; Derived by automated computational analysis using gene prediction method: Protein Homology.; aminoalkylphosphonic acid N-acetyltransferase 4506564 16981966 LY180_21505 Escherichia coli LY180 aminoalkylphosphonic acid N-acetyltransferase YP_008567311.1 4506130 R 1335916 CDS YP_008567312.1 544392523 16981967 complement(4506551..4507108) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ribose 1,5-bisphosphokinase 4507108 16981967 LY180_21510 Escherichia coli LY180 ribose 1,5-bisphosphokinase YP_008567312.1 4506551 R 1335916 CDS YP_008567313.1 544392524 16981968 complement(4507108..4508244) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphonate metabolism protein PhnM 4508244 16981968 LY180_21515 Escherichia coli LY180 phosphonate metabolism protein PhnM YP_008567313.1 4507108 R 1335916 CDS YP_008567314.1 544393268 16981969 complement(4508241..4508921) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; phosphonate ABC transporter ATP-binding protein 4508921 16981969 LY180_21520 Escherichia coli LY180 phosphonate ABC transporter ATP-binding protein YP_008567314.1 4508241 R 1335916 CDS YP_008567315.1 544393269 16981970 complement(4509032..4509790) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; phosphonate C-P lyase 4509790 phnK 16981970 phnK Escherichia coli LY180 phosphonate C-P lyase YP_008567315.1 4509032 R 1335916 CDS YP_008567316.1 544392525 16981971 complement(4509787..4510632) 1 NC_022364.1 required for use of phosphonate and phosphite; Derived by automated computational analysis using gene prediction method: Protein Homology.; carbon-phosphorus lyase complex subunit PhnJ 4510632 16981971 LY180_21530 Escherichia coli LY180 carbon-phosphorus lyase complex subunit PhnJ YP_008567316.1 4509787 R 1335916 CDS YP_008567317.1 544392526 16981972 complement(4510625..4511689) 1 NC_022364.1 required for the use of phosphonate and phosphite; Derived by automated computational analysis using gene prediction method: Protein Homology.; carbon-phosphorus lyase complex subunit PhnI 4511689 16981972 LY180_21535 Escherichia coli LY180 carbon-phosphorus lyase complex subunit PhnI YP_008567317.1 4510625 R 1335916 CDS YP_008567318.1 544392527 16981973 complement(4511689..4512273) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphonate C-P lyase system protein PhnH 4512273 phnH 16981973 phnH Escherichia coli LY180 phosphonate C-P lyase system protein PhnH YP_008567318.1 4511689 R 1335916 CDS YP_008567319.1 544392528 16981974 complement(4512270..4512722) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphonate C-P lyase system protein PhnG 4512722 16981974 LY180_21545 Escherichia coli LY180 phosphonate C-P lyase system protein PhnG YP_008567319.1 4512270 R 1335916 CDS YP_008567320.1 544392529 16981975 complement(4512723..4513448) 1 NC_022364.1 may be involved in phosphonate uptake and biodegradation; Derived by automated computational analysis using gene prediction method: Protein Homology.; GntR family transcriptional regulator 4513448 16981975 LY180_21550 Escherichia coli LY180 GntR family transcriptional regulator YP_008567320.1 4512723 R 1335916 CDS YP_008567321.1 544392530 16981977 complement(4514362..4515378) 1 NC_022364.1 with PhnCE is involved in the transport of phosphonates; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphonate ABC transporter substrate-binding protein 4515378 16981977 LY180_21560 Escherichia coli LY180 phosphonate ABC transporter substrate-binding protein YP_008567321.1 4514362 R 1335916 CDS YP_008567322.1 544392531 16981978 complement(4515403..4516191) 1 NC_022364.1 similar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutamine ABC transporter ATP-binding protein 4516191 glnQ 16981978 glnQ Escherichia coli LY180 glutamine ABC transporter ATP-binding protein YP_008567322.1 4515403 R 1335916 CDS YP_008567323.1 544392532 16981979 complement(4516324..4516767) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4516767 16981979 LY180_21570 Escherichia coli LY180 hypothetical protein YP_008567323.1 4516324 R 1335916 CDS YP_008567324.1 544392533 16981980 complement(4517425..4517838) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4517838 16981980 LY180_21575 Escherichia coli LY180 hypothetical protein YP_008567324.1 4517425 R 1335916 CDS YP_008567325.1 544392534 16981981 4518161..4520389 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4520389 16981981 LY180_21580 Escherichia coli LY180 hypothetical protein YP_008567325.1 4518161 D 1335916 CDS YP_008567326.1 544392535 16981982 4520386..4521264 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4521264 16981982 LY180_21585 Escherichia coli LY180 hypothetical protein YP_008567326.1 4520386 D 1335916 CDS YP_008567327.1 544392536 16981983 4521528..4523030 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; proline/glycine betaine transporter 4523030 16981983 LY180_21590 Escherichia coli LY180 proline/glycine betaine transporter YP_008567327.1 4521528 D 1335916 CDS YP_008567328.1 544393270 16981984 4523142..4523231 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 4523231 16981984 LY180_21595 Escherichia coli LY180 membrane protein YP_008567328.1 4523142 D 1335916 CDS YP_008567329.1 544392537 16981985 complement(4523207..4524307) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sensor protein BasS/PmrB 4524307 16981985 LY180_21600 Escherichia coli LY180 sensor protein BasS/PmrB YP_008567329.1 4523207 R 1335916 CDS YP_008567330.1 544392538 16981986 complement(4524308..4524976) 1 NC_022364.1 response regulator in two-component regulatory system with BasS; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4524976 16981986 LY180_21605 Escherichia coli LY180 transcriptional regulator YP_008567330.1 4524308 R 1335916 CDS YP_008567331.1 544392539 16981987 complement(4524973..4526616) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; metal dependent hydrolase 4526616 16981987 LY180_21610 Escherichia coli LY180 metal dependent hydrolase YP_008567331.1 4524973 R 1335916 CDS YP_008567332.1 544392540 16981988 complement(4526720..4528057) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; arginine:agmatine antiporter 4528057 16981988 LY180_21615 Escherichia coli LY180 arginine:agmatine antiporter YP_008567332.1 4526720 R 1335916 CDS YP_008567333.1 544392541 16981989 complement(4528194..4528955) 1 NC_022364.1 regulates genes involved in arginine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4528955 16981989 LY180_21620 Escherichia coli LY180 transcriptional regulator YP_008567333.1 4528194 R 1335916 CDS YP_008567334.1 544392542 16981990 complement(4529280..4531550) 1 NC_022364.1 biodegradative; catalyzes the formation of agmatine from arginine; Derived by automated computational analysis using gene prediction method: Protein Homology.; arginine decarboxylase 4531550 16981990 LY180_21625 Escherichia coli LY180 arginine decarboxylase YP_008567334.1 4529280 R 1335916 CDS YP_008567335.1 544392543 16981991 complement(4531746..4532654) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4532654 16981991 LY180_21630 Escherichia coli LY180 transcriptional regulator YP_008567335.1 4531746 R 1335916 CDS YP_008567336.1 544392544 16981992 4532937..4534292 1 NC_022364.1 catalyses the hydrolysis of terminal non-reducing alpha-D-galactose residues in alpha-D-galactosides; Derived by automated computational analysis using gene prediction method: Protein Homology.; alpha-galactosidase 4534292 16981992 LY180_21635 Escherichia coli LY180 alpha-galactosidase YP_008567336.1 4532937 D 1335916 CDS YP_008567337.1 544392545 16981993 4534395..4535816 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar:sodium symporter 4535816 16981993 LY180_21640 Escherichia coli LY180 sugar:sodium symporter YP_008567337.1 4534395 D 1335916 CDS YP_008567338.1 544392546 16981994 complement(4535955..4536584) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4536584 16981994 LY180_21645 Escherichia coli LY180 membrane protein YP_008567338.1 4535955 R 1335916 CDS YP_008567339.1 544392547 16981995 complement(4536706..4538352) 1 NC_022364.1 catalyzes the formation of malate from fumerate; Derived by automated computational analysis using gene prediction method: Protein Homology.; fumarate hydratase 4538352 16981995 LY180_21650 Escherichia coli LY180 fumarate hydratase YP_008567339.1 4536706 R 1335916 CDS YP_008567340.1 544392548 16981996 complement(4538430..4539770) 1 NC_022364.1 functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to DcuA; DcuA and DcuB function as independent and mutually redundant C4-dicarboxylate (aspartate, malate, fumarate and succinate) transporters; Derived by automated computational analysis using gene prediction method: Protein Homology.; C4-dicarboxylate ABC transporter 4539770 16981996 LY180_21655 Escherichia coli LY180 C4-dicarboxylate ABC transporter YP_008567340.1 4538430 R 1335916 CDS YP_008567341.1 544392549 16981997 complement(4540341..4541060) 1 NC_022364.1 response regulator in two-component regulatory system with DcuS; phosphorylated DcuR activates transcription of genes involved in anaerobic fumarate respiration; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4541060 16981997 LY180_21660 Escherichia coli LY180 transcriptional regulator YP_008567341.1 4540341 R 1335916 CDS YP_008567342.1 544392550 16981998 complement(4541057..4542688) 1 NC_022364.1 C4-dicarboxylate-sensing histidine kinase; part of two-component regulatory system with DcuR; regulates anaerobic fumarate respiration; Derived by automated computational analysis using gene prediction method: Protein Homology.; sensory histidine kinase 4542688 16981998 LY180_21665 Escherichia coli LY180 sensory histidine kinase YP_008567342.1 4541057 R 1335916 CDS YP_008567343.1 544392551 16981999 4542869..4543099 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4543099 16981999 LY180_21670 Escherichia coli LY180 hypothetical protein YP_008567343.1 4542869 D 1335916 CDS YP_008567344.1 544392552 16982000 4543111..4543383 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4543383 16982000 LY180_21675 Escherichia coli LY180 hypothetical protein YP_008567344.1 4543111 D 1335916 CDS YP_008567345.1 544392553 16982001 4543610..4543906 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4543906 16982001 LY180_21680 Escherichia coli LY180 hypothetical protein YP_008567345.1 4543610 D 1335916 CDS YP_008567346.1 544392554 16982002 4543934..4544107 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4544107 16982002 LY180_21685 Escherichia coli LY180 hypothetical protein YP_008567346.1 4543934 D 1335916 CDS YP_008567347.1 544392555 16982003 complement(4544226..4545743) 1 NC_022364.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; Derived by automated computational analysis using gene prediction method: Protein Homology.; lysyl-tRNA synthetase 4545743 lysS 16982003 lysS Escherichia coli LY180 lysyl-tRNA synthetase YP_008567347.1 4544226 R 1335916 CDS YP_008567348.1 544392556 16982004 complement(4545980..4547437) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide permease 4547437 16982004 LY180_21695 Escherichia coli LY180 peptide permease YP_008567348.1 4545980 R 1335916 CDS YP_008567349.1 544392557 16982005 complement(4547496..4549643) 1 NC_022364.1 constitutive; catalyzes the formation of cadaverine from lysine; Derived by automated computational analysis using gene prediction method: Protein Homology.; lysine decarboxylase CadA 4549643 16982005 LY180_21700 Escherichia coli LY180 lysine decarboxylase CadA YP_008567349.1 4547496 R 1335916 CDS YP_008567350.1 544392558 16982006 complement(4549723..4551057) 1 NC_022364.1 antiporter protein responsible for lysine import and cadaverine export; member of the lysine-dependent acid resistance system 4 (AR4); inner membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; arginine:agmatine antiporter 4551057 cadB 16982006 cadB Escherichia coli LY180 arginine:agmatine antiporter YP_008567350.1 4549723 R 1335916 CDS YP_008567351.1 544392559 16982007 complement(4551422..4552960) 1 NC_022364.1 regulates the cadBA operon; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4552960 16982007 LY180_21710 Escherichia coli LY180 transcriptional regulator YP_008567351.1 4551422 R 1335916 CDS YP_008567352.1 544393271 16982008 4553247..4553465 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4553465 16982008 LY180_21715 Escherichia coli LY180 hypothetical protein YP_008567352.1 4553247 D 1335916 CDS YP_008567353.1 544392560 16982010 complement(4553759..4554334) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4554334 16982010 LY180_21725 Escherichia coli LY180 transcriptional regulator YP_008567353.1 4553759 R 1335916 CDS YP_008567354.1 544392561 16982011 complement(4554371..4556068) 1 NC_022364.1 two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm; DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm; Derived by automated computational analysis using gene prediction method: Protein Homology.; thiol:disulfide interchange protein 4556068 dipZ 16982011 dipZ Escherichia coli LY180 thiol:disulfide interchange protein YP_008567354.1 4554371 R 1335916 CDS YP_008567355.1 544392562 16982012 complement(4556044..4556382) 1 NC_022364.1 copper binding protein required for copper tolerance; involved in resistance toward heavy metals; Derived by automated computational analysis using gene prediction method: Protein Homology.; divalent ion tolerance protein CutA 4556382 16982012 LY180_21735 Escherichia coli LY180 divalent ion tolerance protein CutA YP_008567355.1 4556044 R 1335916 CDS YP_008567356.1 544392563 16982013 complement(4556498..4557799) 1 NC_022364.1 functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to dcuB; Derived by automated computational analysis using gene prediction method: Protein Homology.; C4-dicarboxylate ABC transporter 4557799 16982013 LY180_21740 Escherichia coli LY180 C4-dicarboxylate ABC transporter YP_008567356.1 4556498 R 1335916 CDS YP_008567357.1 544392564 16982014 complement(4557917..4559353) 1 NC_022364.1 catalyzes the formation of fumarate from aspartate; Derived by automated computational analysis using gene prediction method: Protein Homology.; aspartate ammonia-lyase 4559353 aspA 16982014 aspA Escherichia coli LY180 aspartate ammonia-lyase YP_008567357.1 4557917 R 1335916 CDS YP_008567358.1 544392565 16982015 4559690..4560166 1 NC_022364.1 F exclusion of bacteriophage T7; overproduction of this protein in Escherichia coli inhibits the F plasmid-mediated exclusion of bacteriophage T7; interacts with the F plasmid-encoded PifA protein; inner membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; exclusion suppressor FxsA 4560166 fxsA 16982015 fxsA Escherichia coli LY180 exclusion suppressor FxsA YP_008567358.1 4559690 D 1335916 CDS YP_008567359.1 544392566 16982016 complement(4560182..4561438) 1 NC_022364.1 uncharacterized member of the APC superfamily of amino acid transporters; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 4561438 16982016 LY180_21755 Escherichia coli LY180 transporter YP_008567359.1 4560182 R 1335916 CDS YP_008567360.1 544392567 16982017 4561714..4562007 1 NC_022364.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; Derived by automated computational analysis using gene prediction method: Protein Homology.; co-chaperonin GroES 4562007 groES 16982017 groES Escherichia coli LY180 co-chaperonin GroES YP_008567360.1 4561714 D 1335916 CDS YP_008567361.1 544392568 16982018 4562051..4563697 1 NC_022364.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; Derived by automated computational analysis using gene prediction method: Protein Homology.; molecular chaperone GroEL 4563697 groEL 16982018 groEL Escherichia coli LY180 molecular chaperone GroEL YP_008567361.1 4562051 D 1335916 CDS YP_008567362.1 544392569 16982019 4563835..4564188 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4564188 16982019 LY180_21770 Escherichia coli LY180 membrane protein YP_008567362.1 4563835 D 1335916 CDS YP_008567363.1 544392570 16982020 complement(4564391..4565260) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4565260 16982020 LY180_21775 Escherichia coli LY180 hypothetical protein YP_008567363.1 4564391 R 1335916 CDS YP_008567364.1 544392571 16982021 complement(4565714..4566742) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; lysine 2,3-aminomutase 4566742 16982021 LY180_21780 Escherichia coli LY180 lysine 2,3-aminomutase YP_008567364.1 4565714 R 1335916 CDS YP_008567365.1 544392572 16982022 4566784..4567350 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; elongation factor P 4567350 16982022 LY180_21785 Escherichia coli LY180 elongation factor P YP_008567365.1 4566784 D 1335916 CDS YP_008567366.1 544392573 16982023 4567402..4567527 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; entericidin B membrane lipoprotein 4567527 16982023 LY180_21790 Escherichia coli LY180 entericidin B membrane lipoprotein YP_008567366.1 4567402 D 1335916 CDS YP_008567367.1 544392574 16982024 4567638..4567784 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; entericidin B membrane lipoprotein 4567784 16982024 LY180_21795 Escherichia coli LY180 entericidin B membrane lipoprotein YP_008567367.1 4567638 D 1335916 CDS YP_008567368.1 544393272 16982025 4567960..4568277 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4568277 16982025 LY180_21800 Escherichia coli LY180 hypothetical protein YP_008567368.1 4567960 D 1335916 CDS YP_008567369.1 544392575 16982026 complement(4568274..4568807) 1 NC_022364.1 lipocalin; globomycin-sensitive outer membrane lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.; outer membrane lipoprotein Blc 4568807 16982026 LY180_21805 Escherichia coli LY180 outer membrane lipoprotein Blc YP_008567369.1 4568274 R 1335916 CDS YP_008567370.1 544392576 16982027 complement(4568896..4570029) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; beta-lactamase 4570029 16982027 LY180_21810 Escherichia coli LY180 beta-lactamase YP_008567370.1 4568896 R 1335916 CDS YP_008567371.1 544392577 16982028 complement(4570092..4570451) 1 NC_022364.1 in conjunction with FrdC acts to anchor the catalytic components of the fumarate reductase to the cytoplasmic membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; fumarate reductase subunit D 4570451 16982028 LY180_21815 Escherichia coli LY180 fumarate reductase subunit D YP_008567371.1 4570092 R 1335916 CDS YP_008567372.1 544392578 16982029 complement(4570462..4570779) 1 NC_022364.1 part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; Derived by automated computational analysis using gene prediction method: Protein Homology.; fumarate reductase subunit C 4570779 16982029 LY180_21820 Escherichia coli LY180 fumarate reductase subunit C YP_008567372.1 4570462 R 1335916 CDS YP_008567373.1 544393273 16982030 complement(4571147..4572133) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; endoglucanase 4572133 16982030 LY180_21825 Escherichia coli LY180 endoglucanase YP_008567373.1 4571147 R 1335916 CDS YP_008567374.1 544392579 16982031 complement(4572422..4574230) 1 NC_022364.1 part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; Derived by automated computational analysis using gene prediction method: Protein Homology.; fumarate reductase flavoprotein subunit 4574230 16982031 LY180_21830 Escherichia coli LY180 fumarate reductase flavoprotein subunit YP_008567374.1 4572422 R 1335916 CDS YP_008567375.1 544393274 16982032 4574555..4575532 1 NC_022364.1 poxA; regulates pyruvate oxidase poxB; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; lysyl-tRNA synthetase 4575532 16982032 LY180_21835 Escherichia coli LY180 lysyl-tRNA synthetase YP_008567375.1 4574555 D 1335916 CDS YP_008567376.1 544392580 16982033 4575751..4577253 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; amino acid ABC transporter permease 4577253 16982033 LY180_21840 Escherichia coli LY180 amino acid ABC transporter permease YP_008567376.1 4575751 D 1335916 CDS YP_008567377.1 544392581 16982034 4577305..4577619 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4577619 16982034 LY180_21845 Escherichia coli LY180 hypothetical protein YP_008567377.1 4577305 D 1335916 CDS YP_008567378.1 544392582 16982035 4577616..4577930 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4577930 16982035 LY180_21850 Escherichia coli LY180 membrane protein YP_008567378.1 4577616 D 1335916 CDS YP_008567379.1 544392583 16982036 complement(4577959..4581282) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; mechanosensitive channel protein 4581282 16982036 LY180_21855 Escherichia coli LY180 mechanosensitive channel protein YP_008567379.1 4577959 R 1335916 CDS YP_008567380.1 544392584 16982037 complement(4581304..4582272) 1 NC_022364.1 catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphatidylserine decarboxylase 4582272 psd 16982037 psd Escherichia coli LY180 phosphatidylserine decarboxylase YP_008567380.1 4581304 R 1335916 CDS YP_008567381.1 544392585 16982038 complement(4582369..4583421) 1 NC_022364.1 EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.; GTPase RsgA 4583421 16982038 LY180_21865 Escherichia coli LY180 GTPase RsgA YP_008567381.1 4582369 R 1335916 CDS YP_008567382.1 544392586 16982039 4583516..4584061 1 NC_022364.1 3'-5' exoribonuclease specific for small oligoribonuclotides; Derived by automated computational analysis using gene prediction method: Protein Homology.; oligoribonuclease 4584061 16982039 LY180_21870 Escherichia coli LY180 oligoribonuclease YP_008567382.1 4583516 D 1335916 CDS YP_008567383.1 544392587 16982043 complement(4584840..4585979) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; iron-sulfur cluster binding protein 4585979 16982043 LY180_21890 Escherichia coli LY180 iron-sulfur cluster binding protein YP_008567383.1 4584840 R 1335916 CDS YP_008567384.1 544392588 16982044 4585978..4587525 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; carbohydrate kinase 4587525 16982044 LY180_21895 Escherichia coli LY180 carbohydrate kinase YP_008567384.1 4585978 D 1335916 CDS YP_008567385.1 544392589 16982045 4587497..4587958 1 NC_022364.1 needed for nucleoid integrity; possibly involved in cell wall synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; ADP-binding protein 4587958 16982045 LY180_21900 Escherichia coli LY180 ADP-binding protein YP_008567385.1 4587497 D 1335916 CDS YP_008567386.1 544392590 16982046 4587977..4589314 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; N-acetylmuramoyl-L-alanine amidase 4589314 16982046 LY180_21905 Escherichia coli LY180 N-acetylmuramoyl-L-alanine amidase YP_008567386.1 4587977 D 1335916 CDS YP_008567387.1 544392591 16982047 4589324..4591171 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA mismatch repair protein 4591171 16982047 LY180_21910 Escherichia coli LY180 DNA mismatch repair protein YP_008567387.1 4589324 D 1335916 CDS YP_008567388.1 544392592 16982048 4591164..4592114 1 NC_022364.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA delta(2)-isopentenylpyrophosphate transferase 4592114 miaA 16982048 miaA Escherichia coli LY180 tRNA delta(2)-isopentenylpyrophosphate transferase YP_008567388.1 4591164 D 1335916 CDS YP_008567389.1 544392593 16982049 4592200..4592508 1 NC_022364.1 HF-I, host factor for RNA phage Q beta replication; Derived by automated computational analysis using gene prediction method: Protein Homology.; RNA-binding protein Hfq 4592508 hfq 16982049 hfq Escherichia coli LY180 RNA-binding protein Hfq YP_008567389.1 4592200 D 1335916 CDS YP_008567390.1 544392594 16982050 4592584..4593864 1 NC_022364.1 involved in modulation of proteins HflK and HflC; part of the hflA locus (high frequency of lysogenization) which governs the lysis-lysogeny decision of bacteriophage lambda by controlling stability of the phage cII protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; GTPase HflX 4593864 16982050 LY180_21925 Escherichia coli LY180 GTPase HflX YP_008567390.1 4592584 D 1335916 CDS YP_008567391.1 544392595 16982051 4593950..4595209 1 NC_022364.1 with HflC inhibits proteolysis of lambda cII protein by FtsH; Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division protein FtsH 4595209 16982051 LY180_21930 Escherichia coli LY180 cell division protein FtsH YP_008567391.1 4593950 D 1335916 CDS YP_008567392.1 544392596 16982052 4595212..4596216 1 NC_022364.1 with HflK inhibits proteolysis of lambda cII protein by FtsH; Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division protein FtsH 4596216 16982052 LY180_21935 Escherichia coli LY180 cell division protein FtsH YP_008567392.1 4595212 D 1335916 CDS YP_008567393.1 544392597 16982053 4596298..4596495 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4596495 16982053 LY180_21940 Escherichia coli LY180 membrane protein YP_008567393.1 4596298 D 1335916 CDS YP_008567394.1 544392598 16982054 4596599..4597897 1 NC_022364.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; adenylosuccinate synthetase 4597897 16982054 LY180_21945 Escherichia coli LY180 adenylosuccinate synthetase YP_008567394.1 4596599 D 1335916 CDS YP_008567395.1 544392599 16982055 4598102..4598527 1 NC_022364.1 negatively regulates the transcription of genes upregulated by nitrosative stress; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4598527 16982055 LY180_21950 Escherichia coli LY180 transcriptional regulator YP_008567395.1 4598102 D 1335916 CDS YP_008567396.1 544392600 16982056 4598566..4601007 1 NC_022364.1 3'-5'exoribonuclease that acts nonspecifically on poly(A), poly(U) and ribosomal RNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.; exoribonuclease R 4601007 16982056 LY180_21955 Escherichia coli LY180 exoribonuclease R YP_008567396.1 4598566 D 1335916 CDS YP_008567397.1 544392601 16982058 4601187..4601918 1 NC_022364.1 Specifically methylates the ribose of guanosine 2251 in 23S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; 23S rRNA (guanosine-2'-O-)-methyltransferase 4601918 16982058 LY180_21965 Escherichia coli LY180 23S rRNA (guanosine-2'-O-)-methyltransferase YP_008567397.1 4601187 D 1335916 CDS YP_008567398.1 544392602 16982059 4602045..4602446 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4602446 16982059 LY180_21970 Escherichia coli LY180 hypothetical protein YP_008567398.1 4602045 D 1335916 CDS YP_008567399.1 544392603 16982060 4602465..4603163 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4603163 16982060 LY180_21975 Escherichia coli LY180 hypothetical protein YP_008567399.1 4602465 D 1335916 CDS YP_008567400.1 544392604 16982061 4603214..4603873 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4603873 16982061 LY180_21980 Escherichia coli LY180 hypothetical protein YP_008567400.1 4603214 D 1335916 CDS YP_008567401.1 544392605 16982062 4603891..4604289 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4604289 16982062 LY180_21985 Escherichia coli LY180 membrane protein YP_008567401.1 4603891 D 1335916 CDS YP_008567402.1 544392606 16982063 4604299..4604937 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4604937 16982063 LY180_21990 Escherichia coli LY180 membrane protein YP_008567402.1 4604299 D 1335916 CDS YP_008567403.1 544392607 16982064 4604961..4606103 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4606103 16982064 LY180_21995 Escherichia coli LY180 hypothetical protein YP_008567403.1 4604961 D 1335916 CDS YP_008567404.1 544392608 16982065 4606187..4607812 1 NC_022364.1 catalyzes the formation of 3-methylcrotonyl-CoA from isovaleryl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.; isovaleryl CoA dehydrogenase 4607812 16982065 LY180_22000 Escherichia coli LY180 isovaleryl CoA dehydrogenase YP_008567404.1 4606187 D 1335916 CDS YP_008567405.1 544392609 16982066 complement(4607929..4608204) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4608204 16982066 LY180_22005 Escherichia coli LY180 hypothetical protein YP_008567405.1 4607929 R 1335916 CDS YP_008567406.1 544392610 16982067 complement(4608353..4608682) 1 NC_022364.1 in Escherichia coli, mutation of this gene affects biofilm maturation, stress response, and motility; Derived by automated computational analysis using gene prediction method: Protein Homology.; biofilm stress and motility protein A 4608682 16982067 LY180_22010 Escherichia coli LY180 biofilm stress and motility protein A YP_008567406.1 4608353 R 1335916 CDS YP_008567407.1 544392611 16982068 4608864..4609613 1 NC_022364.1 YjfP; esterase activity towards palmitoyl-CoA and pNP-butyrate in vitro; unknown function and substrate in vivo; Derived by automated computational analysis using gene prediction method: Protein Homology.; esterase 4609613 16982068 LY180_22015 Escherichia coli LY180 esterase YP_008567407.1 4608864 D 1335916 CDS YP_008567408.1 544392612 16982069 complement(4609610..4610365) 1 NC_022364.1 negative regulator of ulaG and ulaABCDEF; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4610365 16982069 LY180_22020 Escherichia coli LY180 transcriptional regulator YP_008567408.1 4609610 R 1335916 CDS YP_008567409.1 544392613 16982070 complement(4610473..4611537) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; L-ascorbate 6-phosphate lactonase 4611537 16982070 LY180_22025 Escherichia coli LY180 L-ascorbate 6-phosphate lactonase YP_008567409.1 4610473 R 1335916 CDS YP_008567410.1 544392614 16982071 4611892..4613289 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS ascorbate transporter subunit IIC 4613289 16982071 LY180_22030 Escherichia coli LY180 PTS ascorbate transporter subunit IIC YP_008567410.1 4611892 D 1335916 CDS YP_008567411.1 544392615 16982073 4613620..4614084 1 NC_022364.1 involved in the phosphorylation and transport of sugars across the cell membrane; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS ascorbate transporter subunit IIA 4614084 16982073 LY180_22040 Escherichia coli LY180 PTS ascorbate transporter subunit IIA YP_008567411.1 4613620 D 1335916 CDS YP_008567412.1 544392616 16982074 4614098..4614748 1 NC_022364.1 catalyzes the formation of L-xylulose-5-phosphate from 3-keto-L-gulonate-6-phosphate in anaerobic L-ascorbate utilization; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-keto-L-gulonate-6-phosphate decarboxylase 4614748 ulaD 16982074 ulaD Escherichia coli LY180 3-keto-L-gulonate-6-phosphate decarboxylase YP_008567412.1 4614098 D 1335916 CDS YP_008567413.1 544392617 16982075 4614758..4615612 1 NC_022364.1 L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated; may be involved in the utilization of 2,3-diketo-L-gulonate; Derived by automated computational analysis using gene prediction method: Protein Homology.; L-xylulose 5-phosphate 3-epimerase 4615612 16982075 LY180_22050 Escherichia coli LY180 L-xylulose 5-phosphate 3-epimerase YP_008567413.1 4614758 D 1335916 CDS YP_008567414.1 544392618 16982076 4615612..4616298 1 NC_022364.1 catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; Derived by automated computational analysis using gene prediction method: Protein Homology.; L-ribulose-5-phosphate 4-epimerase 4616298 sgaE 16982076 sgaE Escherichia coli LY180 L-ribulose-5-phosphate 4-epimerase YP_008567414.1 4615612 D 1335916 CDS YP_008567415.1 544392619 16982077 4616393..4616944 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4616944 16982077 LY180_22060 Escherichia coli LY180 membrane protein YP_008567415.1 4616393 D 1335916 CDS YP_008567416.1 544392620 16982078 complement(4617019..4617294) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4617294 16982078 LY180_22065 Escherichia coli LY180 membrane protein YP_008567416.1 4617019 R 1335916 CDS YP_008567417.1 544392621 16982079 4617621..4618016 1 NC_022364.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S6 4618016 rpsF 16982079 rpsF Escherichia coli LY180 30S ribosomal protein S6 YP_008567417.1 4617621 D 1335916 CDS YP_008567418.1 544393275 16982080 4618170..4618337 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; primosomal replication protein N 4618337 16982080 LY180_22075 Escherichia coli LY180 primosomal replication protein N YP_008567418.1 4618170 D 1335916 CDS YP_008567419.1 544392622 16982081 4618342..4618569 1 NC_022364.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S18 4618569 rpsR 16982081 rpsR Escherichia coli LY180 30S ribosomal protein S18 YP_008567419.1 4618342 D 1335916 CDS YP_008567420.1 544392623 16982082 4618611..4619060 1 NC_022364.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L9 4619060 rplI 16982082 rplI Escherichia coli LY180 50S ribosomal protein L9 YP_008567420.1 4618611 D 1335916 CDS YP_008567421.1 544392624 16982083 complement(4619131..4619925) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4619925 16982083 LY180_22090 Escherichia coli LY180 hypothetical protein YP_008567421.1 4619131 R 1335916 CDS YP_008567422.1 544392625 16982084 complement(4620365..4620916) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transposase TnA 4620916 16982084 LY180_22095 Escherichia coli LY180 transposase TnA YP_008567422.1 4620365 R 1335916 CDS YP_008567423.1 544392626 16982085 4620929..4622194 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transposase IS609 4622194 16982085 LY180_22100 Escherichia coli LY180 transposase IS609 YP_008567423.1 4620929 D 1335916 CDS YP_008567424.1 544392627 16982086 complement(4622329..4622967) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4622967 16982086 LY180_22105 Escherichia coli LY180 hypothetical protein YP_008567424.1 4622329 R 1335916 CDS YP_008567425.1 544392628 16982087 4623185..4623805 1 NC_022364.1 FKBP-type; rotamase; catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidyl-prolyl cis-trans isomerase 4623805 16982087 LY180_22110 Escherichia coli LY180 peptidyl-prolyl cis-trans isomerase YP_008567425.1 4623185 D 1335916 CDS YP_008567426.1 544392629 16982088 4624114..4625526 1 NC_022364.1 involved in the transport across the cytoplasmic membrane of D-alanine, D-serine and glycine; Derived by automated computational analysis using gene prediction method: Protein Homology.; alanine glycine permease 4625526 16982088 LY180_22115 Escherichia coli LY180 alanine glycine permease YP_008567426.1 4624114 D 1335916 CDS YP_008567427.1 544392630 16982089 complement(4625571..4626233) 1 NC_022364.1 Involved in anaerobic NO protection and iron metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.; iron-sulfur cluster repair di-iron protein 4626233 16982089 LY180_22120 Escherichia coli LY180 iron-sulfur cluster repair di-iron protein YP_008567427.1 4625571 R 1335916 CDS YP_008567428.1 544392631 16982090 complement(4626341..4627306) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4627306 16982090 LY180_22125 Escherichia coli LY180 membrane protein YP_008567428.1 4626341 R 1335916 CDS YP_008567429.1 544392632 16982091 complement(4627415..4628275) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; quinone oxidoreductase 4628275 16982091 LY180_22130 Escherichia coli LY180 quinone oxidoreductase YP_008567429.1 4627415 R 1335916 CDS YP_008567430.1 544392633 16982092 4628364..4628744 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; HxlR family transcriptional regulator 4628744 16982092 LY180_22135 Escherichia coli LY180 HxlR family transcriptional regulator YP_008567430.1 4628364 D 1335916 CDS YP_008567431.1 544392634 16982093 complement(4628873..4630816) 1 NC_022364.1 periplasmic enzyme; functions during ribonucleic acid degradation; 2',3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3'-nucleotidase 4630816 cpdB 16982093 cpdB Escherichia coli LY180 3'-nucleotidase YP_008567431.1 4628873 R 1335916 CDS YP_008567432.1 544392635 16982094 4631006..4631746 1 NC_022364.1 catalyzes the formation of AMP from adenosine-3',5'-bisphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3'-5'-bisphosphate nucleotidase 4631746 16982094 LY180_22145 Escherichia coli LY180 3'-5'-bisphosphate nucleotidase YP_008567432.1 4631006 D 1335916 CDS YP_008567433.1 544392636 16982095 complement(4631736..4632293) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4632293 16982095 LY180_22150 Escherichia coli LY180 hypothetical protein YP_008567433.1 4631736 R 1335916 CDS YP_008567434.1 544392637 16982096 4632618..4632824 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4632824 16982096 LY180_22155 Escherichia coli LY180 hypothetical protein YP_008567434.1 4632618 D 1335916 CDS YP_008567435.1 544392638 16982097 complement(4632886..4634229) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4634229 16982097 LY180_22160 Escherichia coli LY180 membrane protein YP_008567435.1 4632886 R 1335916 CDS YP_008567436.1 544392639 16982098 complement(4634552..4635190) 1 NC_022364.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; Derived by automated computational analysis using gene prediction method: Protein Homology.; methionine sulfoxide reductase A 4635190 16982098 LY180_22165 Escherichia coli LY180 methionine sulfoxide reductase A YP_008567436.1 4634552 R 1335916 CDS YP_008567437.1 544392640 16982099 4635396..4637129 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4637129 16982099 LY180_22170 Escherichia coli LY180 membrane protein YP_008567437.1 4635396 D 1335916 CDS YP_008567438.1 544392641 16982100 4637126..4640905 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4640905 16982100 LY180_22175 Escherichia coli LY180 hypothetical protein YP_008567438.1 4637126 D 1335916 CDS YP_008567439.1 544392642 16982101 4640908..4641249 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; gamma-glutamylcyclotransferase 4641249 16982101 LY180_22180 Escherichia coli LY180 gamma-glutamylcyclotransferase YP_008567439.1 4640908 D 1335916 CDS YP_008567440.1 544392643 16982102 4641462..4641713 1 NC_022364.1 part of the toxin-antitoxin ChpB-ChpS system; Derived by automated computational analysis using gene prediction method: Protein Homology.; antitoxin 4641713 16982102 LY180_22190 Escherichia coli LY180 antitoxin YP_008567440.1 4641462 D 1335916 CDS YP_008567441.1 544392644 16982103 4641707..4642057 1 NC_022364.1 toxin of the ChpB-ChpS toxin-antitoxin system; Derived by automated computational analysis using gene prediction method: Protein Homology.; toxin B 4642057 16982103 LY180_22195 Escherichia coli LY180 toxin B YP_008567441.1 4641707 D 1335916 CDS YP_008567442.1 544392645 16982104 complement(4642137..4642667) 1 NC_022364.1 catalyzes the hydrolysis of pyrophosphate to phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; inorganic pyrophosphatase 4642667 16982104 LY180_22200 Escherichia coli LY180 inorganic pyrophosphatase YP_008567442.1 4642137 R 1335916 CDS YP_008567443.1 544392646 16982105 4642977..4643933 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar ABC transporter substrate-binding protein 4643933 16982105 LY180_22205 Escherichia coli LY180 sugar ABC transporter substrate-binding protein YP_008567443.1 4642977 D 1335916 CDS YP_008567444.1 544392647 16982106 4644073..4645575 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar ABC transporter ATP-binding protein 4645575 16982106 LY180_22210 Escherichia coli LY180 sugar ABC transporter ATP-binding protein YP_008567444.1 4644073 D 1335916 CDS YP_008567445.1 544392648 16982107 4645589..4646611 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar ABC transporter permease 4646611 16982107 LY180_22215 Escherichia coli LY180 sugar ABC transporter permease YP_008567445.1 4645589 D 1335916 CDS YP_008567446.1 544392649 16982108 4646598..4647593 1 NC_022364.1 membrane component of a putative sugar ABC transporter system; Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar ABC transporter permease 4647593 16982108 LY180_22220 Escherichia coli LY180 sugar ABC transporter permease YP_008567446.1 4646598 D 1335916 CDS YP_008567447.1 544392650 16982109 complement(4647626..4648624) 1 NC_022364.1 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; fructose-1,6-bisphosphatase 4648624 16982109 LY180_22225 Escherichia coli LY180 fructose-1,6-bisphosphatase YP_008567447.1 4647626 R 1335916 CDS YP_008567448.1 544392651 16982110 4648800..4650173 1 NC_022364.1 ligates L-alanyl-gamma-D-glutamyl-meso-diaminopimelate to UDP-N-acetylmuramic acid for reincorporation into peptidoglycan; Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 4650173 16982110 LY180_22230 Escherichia coli LY180 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase YP_008567448.1 4648800 D 1335916 CDS YP_008567449.1 544392652 16982111 complement(4650329..4650880) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4650880 16982111 LY180_22235 Escherichia coli LY180 hypothetical protein YP_008567449.1 4650329 R 1335916 CDS YP_008567450.1 544392653 16982112 4650974..4652326 1 NC_022364.1 protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidase PmbA 4652326 pmbA 16982112 pmbA Escherichia coli LY180 peptidase PmbA YP_008567450.1 4650974 D 1335916 CDS YP_008567451.1 544393276 16982113 4652509..4652895 1 NC_022364.1 electron transport protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; cytochrome B562 4652895 16982113 LY180_22245 Escherichia coli LY180 cytochrome B562 YP_008567451.1 4652509 D 1335916 CDS YP_008567452.1 544392654 16982114 complement(4652940..4653404) 1 NC_022364.1 activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions; Derived by automated computational analysis using gene prediction method: Protein Homology.; anaerobic ribonucleotide reductase-activating protein 4653404 16982114 LY180_22250 Escherichia coli LY180 anaerobic ribonucleotide reductase-activating protein YP_008567452.1 4652940 R 1335916 CDS YP_008567453.1 544392655 16982115 complement(4653562..4655700) 1 NC_022364.1 Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonucleoside triphosphate reductase 4655700 16982115 LY180_22255 Escherichia coli LY180 ribonucleoside triphosphate reductase YP_008567453.1 4653562 R 1335916 CDS YP_008567454.1 544392656 16982116 complement(4656094..4657749) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; trehalose-6-phosphate hydrolase 4657749 16982116 LY180_22260 Escherichia coli LY180 trehalose-6-phosphate hydrolase YP_008567454.1 4656094 R 1335916 CDS YP_008567455.1 544392657 16982117 complement(4657799..4659217) 1 NC_022364.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS maltose transporter subunit IIBC 4659217 16982117 LY180_22265 Escherichia coli LY180 PTS maltose transporter subunit IIBC YP_008567455.1 4657799 R 1335916 CDS YP_008567456.1 544392658 16982118 complement(4659339..4660286) 1 NC_022364.1 regulates genes involved in trehalose metabolism; binds the intermediate trehalose-6-phosphate; binds a dimer; regulates treBC operon; Derived by automated computational analysis using gene prediction method: Protein Homology.; trehalose repressor 4660286 treR 16982118 treR Escherichia coli LY180 trehalose repressor YP_008567456.1 4659339 R 1335916 CDS YP_008567457.1 544392659 16982119 4660665..4663361 1 NC_022364.1 P-type ATPase involved in magnesium influx; Derived by automated computational analysis using gene prediction method: Protein Homology.; magnesium-transporting ATPase 4663361 16982119 LY180_22275 Escherichia coli LY180 magnesium-transporting ATPase YP_008567457.1 4660665 D 1335916 CDS YP_008567458.1 544392660 16982120 complement(4663442..4663543) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4663543 16982120 LY180_22280 Escherichia coli LY180 hypothetical protein YP_008567458.1 4663442 R 1335916 CDS YP_008567459.1 544392661 16982121 complement(4663567..4663953) 1 NC_022364.1 has endoribonuclease activity on mRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; endoribonuclease L-PSP 4663953 16982121 LY180_22285 Escherichia coli LY180 endoribonuclease L-PSP YP_008567459.1 4663567 R 1335916 CDS YP_008567460.1 544392662 16982122 complement(4664026..4664487) 1 NC_022364.1 involved in the allosteric regulation of aspartate carbamoyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.; aspartate carbamoyltransferase regulatory subunit 4664487 16982122 LY180_22290 Escherichia coli LY180 aspartate carbamoyltransferase regulatory subunit YP_008567460.1 4664026 R 1335916 CDS YP_008567461.1 544392663 16982123 complement(4664500..4665435) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; aspartate carbamoyltransferase catalytic subunit 4665435 16982123 LY180_22295 Escherichia coli LY180 aspartate carbamoyltransferase catalytic subunit YP_008567461.1 4664500 R 1335916 CDS YP_008567462.1 544392664 16982124 complement(4665854..4666249) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; mRNA endoribonuclease 4666249 16982124 LY180_22300 Escherichia coli LY180 mRNA endoribonuclease YP_008567462.1 4665854 R 1335916 CDS YP_008567463.1 544392665 16982125 complement(4666380..4667093) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase 4667093 16982125 LY180_22305 Escherichia coli LY180 oxidoreductase YP_008567463.1 4666380 R 1335916 CDS YP_008567464.1 544392666 16982126 4667164..4667757 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; TetR family transcriptional regulator 4667757 16982126 LY180_22310 Escherichia coli LY180 TetR family transcriptional regulator YP_008567464.1 4667164 D 1335916 CDS YP_008567465.1 544393277 16982127 4667757..4667885 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4667885 16982127 LY180_22315 Escherichia coli LY180 hypothetical protein YP_008567465.1 4667757 D 1335916 CDS YP_008567466.1 544392667 16982128 4667902..4668354 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Toxin-antitoxin biofilm protein TabA 4668354 16982128 LY180_22320 Escherichia coli LY180 Toxin-antitoxin biofilm protein TabA YP_008567466.1 4667902 D 1335916 CDS YP_008567467.1 544393278 16982129 4668477..4669451 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; DNA-binding protein 4669451 16982129 LY180_22325 Escherichia coli LY180 DNA-binding protein YP_008567467.1 4668477 D 1335916 CDS YP_008567468.1 544393279 16982130 4669807..4670037 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4670037 16982130 LY180_22330 Escherichia coli LY180 hypothetical protein YP_008567468.1 4669807 D 1335916 CDS YP_008567469.1 544392668 16982131 complement(4670138..4671142) 1 NC_022364.1 catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.; ornithine carbamoyltransferase 4671142 16982131 LY180_22335 Escherichia coli LY180 ornithine carbamoyltransferase YP_008567469.1 4670138 R 1335916 CDS YP_008567470.1 544392669 16982132 4671304..4671720 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; RNase E inhibitor protein 4671720 16982132 LY180_22340 Escherichia coli LY180 RNase E inhibitor protein YP_008567470.1 4671304 D 1335916 CDS YP_008567471.1 544392670 16982133 complement(4671766..4672269) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; N-acetyltransferase 4672269 16982133 LY180_22345 Escherichia coli LY180 N-acetyltransferase YP_008567471.1 4671766 R 1335916 CDS YP_008567472.1 544393280 16982134 4672462..4673658 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 4673658 16982134 LY180_22350 Escherichia coli LY180 membrane protein YP_008567472.1 4672462 D 1335916 CDS YP_008567473.1 544392671 16982135 complement(4673714..4676569) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; valyl-tRNA synthase 4676569 16982135 LY180_22355 Escherichia coli LY180 valyl-tRNA synthase YP_008567473.1 4673714 R 1335916 CDS YP_008567474.1 544392672 16982136 complement(4676569..4677012) 1 NC_022364.1 binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA polymerase III subunit chi 4677012 16982136 LY180_22360 Escherichia coli LY180 DNA polymerase III subunit chi YP_008567474.1 4676569 R 1335916 CDS YP_008567475.1 544392673 16982137 complement(4677146..4678657) 1 NC_022364.1 catalyzes the removal of N-terminal amino acids preferably from various peptides; a cyteinylglycinase, transcription regulator and site-specific recombination factor; Derived by automated computational analysis using gene prediction method: Protein Homology.; multifunctional aminopeptidase A 4678657 16982137 LY180_22365 Escherichia coli LY180 multifunctional aminopeptidase A YP_008567475.1 4677146 R 1335916 CDS YP_008567476.1 544392674 16982138 4678924..4680024 1 NC_022364.1 with LptBGC is involved in lipopolysaccharide export; Derived by automated computational analysis using gene prediction method: Protein Homology.; lipopolysaccharide ABC transporter permease LptF 4680024 16982138 LY180_22370 Escherichia coli LY180 lipopolysaccharide ABC transporter permease LptF YP_008567476.1 4678924 D 1335916 CDS YP_008567477.1 544392675 16982139 4680024..4681106 1 NC_022364.1 with LptABCF is involved in the transport of lipopolysaccharides; Derived by automated computational analysis using gene prediction method: Protein Homology.; lipopolysaccharide ABC transporter permease 4681106 16982139 LY180_22375 Escherichia coli LY180 lipopolysaccharide ABC transporter permease YP_008567477.1 4680024 D 1335916 CDS YP_008567478.1 544392676 16982140 complement(4681225..4682727) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4682727 16982140 LY180_22380 Escherichia coli LY180 hypothetical protein YP_008567478.1 4681225 R 1335916 CDS YP_008567479.1 544392677 16982141 complement(4682805..4683803) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4683803 16982141 LY180_22385 Escherichia coli LY180 transcriptional regulator YP_008567479.1 4682805 R 1335916 CDS YP_008567480.1 544392678 16982142 complement(4683870..4685189) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Gnt-II system L-idonate transporter IdnT 4685189 16982142 LY180_22390 Escherichia coli LY180 Gnt-II system L-idonate transporter IdnT YP_008567480.1 4683870 R 1335916 CDS YP_008567481.1 544392679 16982143 complement(4685254..4686018) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase 4686018 16982143 LY180_22395 Escherichia coli LY180 oxidoreductase YP_008567481.1 4685254 R 1335916 CDS YP_008567482.1 544392680 16982144 complement(4686042..4687073) 1 NC_022364.1 NAD-binding; Derived by automated computational analysis using gene prediction method: Protein Homology.; L-idonate 5-dehydrogenase 4687073 16982144 LY180_22400 Escherichia coli LY180 L-idonate 5-dehydrogenase YP_008567482.1 4686042 R 1335916 CDS YP_008567483.1 544392681 16982145 4687290..4687853 1 NC_022364.1 thermoresistant; catalyzes the formation of 6-phospho-D-gluconate from gluconate; Derived by automated computational analysis using gene prediction method: Protein Homology.; gluconate kinase 1 4687853 gntK 16982145 gntK Escherichia coli LY180 gluconate kinase 1 YP_008567483.1 4687290 D 1335916 CDS YP_008567484.1 544392682 16982146 complement(4687857..4688876) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; alcohol dehydrogenase 4688876 16982146 LY180_22410 Escherichia coli LY180 alcohol dehydrogenase YP_008567484.1 4687857 R 1335916 CDS YP_008567485.1 544392683 16982148 4689357..4690625 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; integrase 4690625 16982148 LY180_22420 Escherichia coli LY180 integrase YP_008567485.1 4689357 D 1335916 CDS YP_008567486.1 544392684 16982149 4690841..4691716 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; restriction endonuclease 4691716 16982149 LY180_22425 Escherichia coli LY180 restriction endonuclease YP_008567486.1 4690841 D 1335916 CDS YP_008567487.1 544393281 16982150 complement(4691794..4692759) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; 5'-nucleotidase 4692759 16982150 LY180_22430 Escherichia coli LY180 5'-nucleotidase YP_008567487.1 4691794 R 1335916 CDS YP_008567488.1 544393282 16982151 complement(4692901..4693167) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; helicase 4693167 16982151 LY180_22435 Escherichia coli LY180 helicase YP_008567488.1 4692901 R 1335916 CDS YP_008567489.1 544393283 16982152 complement(4693160..4694908) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4694908 16982152 LY180_22440 Escherichia coli LY180 hypothetical protein YP_008567489.1 4693160 R 1335916 CDS YP_008567490.1 544393284 16982153 complement(4695103..4696170) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; restriction endonuclease 4696170 16982153 LY180_22445 Escherichia coli LY180 restriction endonuclease YP_008567490.1 4695103 R 1335916 CDS YP_008567491.1 544393285 16982154 complement(4696278..4697912) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; DNA methyltransferase 4697912 16982154 LY180_22450 Escherichia coli LY180 DNA methyltransferase YP_008567491.1 4696278 R 1335916 CDS YP_008567492.1 544393286 16982155 complement(4697976..4701389) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; DEAD/DEAH box helicase 4701389 16982155 LY180_22455 Escherichia coli LY180 DEAD/DEAH box helicase YP_008567492.1 4697976 R 1335916 CDS YP_008567493.1 544393287 16982156 complement(4701833..4701967) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4701967 16982156 LY180_22460 Escherichia coli LY180 hypothetical protein YP_008567493.1 4701833 R 1335916 CDS YP_008567494.1 544392685 16982157 4701966..4702649 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4702649 16982157 LY180_22465 Escherichia coli LY180 transcriptional regulator YP_008567494.1 4701966 D 1335916 CDS YP_008567495.1 544392686 16982158 4702688..4703701 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4703701 16982158 LY180_22470 Escherichia coli LY180 hypothetical protein YP_008567495.1 4702688 D 1335916 CDS YP_008567496.1 544393288 16982159 4703714..4704478 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4704478 16982159 LY180_22475 Escherichia coli LY180 hypothetical protein YP_008567496.1 4703714 D 1335916 CDS YP_008567497.1 544393289 16982160 complement(4704699..4704917) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; Rha family transcriptional regulator 4704917 16982160 LY180_22480 Escherichia coli LY180 Rha family transcriptional regulator YP_008567497.1 4704699 R 1335916 CDS YP_008567498.1 544393290 16982161 complement(4705035..4705649) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; malate transporter 4705649 16982161 LY180_22485 Escherichia coli LY180 malate transporter YP_008567498.1 4705035 R 1335916 CDS YP_008567499.1 544393291 16982162 4706242..4707195 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4707195 16982162 LY180_22490 Escherichia coli LY180 hypothetical protein YP_008567499.1 4706242 D 1335916 CDS YP_008567500.1 544392687 16982163 4707431..4708249 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4708249 16982163 LY180_22495 Escherichia coli LY180 hypothetical protein YP_008567500.1 4707431 D 1335916 CDS YP_008567501.1 544392688 16982164 4708279..4708752 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4708752 16982164 LY180_22500 Escherichia coli LY180 hypothetical protein YP_008567501.1 4708279 D 1335916 CDS YP_008567502.1 544392689 16982165 4708752..4709087 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; antitoxin 4709087 16982165 LY180_22505 Escherichia coli LY180 antitoxin YP_008567502.1 4708752 D 1335916 CDS YP_008567503.1 544392690 16982166 4709118..4709459 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; toxin 4709459 16982166 LY180_22510 Escherichia coli LY180 toxin YP_008567503.1 4709118 D 1335916 CDS YP_008567504.1 544393292 16982167 4709574..4710407 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; restriction methylase 4710407 16982167 LY180_22515 Escherichia coli LY180 restriction methylase YP_008567504.1 4709574 D 1335916 CDS YP_008567505.1 544393293 16982168 4710477..4710872 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; S-adenosylhomocysteine hydrolase 4710872 16982168 LY180_22520 Escherichia coli LY180 S-adenosylhomocysteine hydrolase YP_008567505.1 4710477 D 1335916 CDS YP_008567506.1 544393294 16982169 4710865..4711812 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4711812 16982169 LY180_22525 Escherichia coli LY180 hypothetical protein YP_008567506.1 4710865 D 1335916 CDS YP_008567507.1 544392691 16982170 4712205..4713470 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; integrase 4713470 16982170 LY180_22530 Escherichia coli LY180 integrase YP_008567507.1 4712205 D 1335916 CDS YP_008567508.1 544393295 16982171 complement(4713671..4715140) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; protein kinase 4715140 16982171 LY180_22535 Escherichia coli LY180 protein kinase YP_008567508.1 4713671 R 1335916 CDS YP_008567509.1 544393296 16982172 complement(4715137..4715679) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4715679 16982172 LY180_22540 Escherichia coli LY180 hypothetical protein YP_008567509.1 4715137 R 1335916 CDS YP_008567510.1 544393297 16982173 complement(4715687..4717372) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; nucleoside triphosphate hydrolase 4717372 16982173 LY180_22545 Escherichia coli LY180 nucleoside triphosphate hydrolase YP_008567510.1 4715687 R 1335916 CDS YP_008567511.1 544393298 16982174 complement(4717362..4718519) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4718519 16982174 LY180_22550 Escherichia coli LY180 hypothetical protein YP_008567511.1 4717362 R 1335916 CDS YP_008567512.1 544393299 16982175 complement(4718522..4719370) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4719370 16982175 LY180_22555 Escherichia coli LY180 hypothetical protein YP_008567512.1 4718522 R 1335916 CDS YP_008567513.1 544393300 16982176 complement(4719381..4723667) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4723667 16982176 LY180_22560 Escherichia coli LY180 hypothetical protein YP_008567513.1 4719381 R 1335916 CDS YP_008567514.1 544393301 16982177 complement(4723664..4724950) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 4724950 16982177 LY180_22565 Escherichia coli LY180 membrane protein YP_008567514.1 4723664 R 1335916 CDS YP_008567515.1 544393302 16982178 complement(4724968..4726494) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; restriction endonuclease 4726494 16982178 LY180_22570 Escherichia coli LY180 restriction endonuclease YP_008567515.1 4724968 R 1335916 CDS YP_008567516.1 544393303 16982179 complement(4726494..4727987) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4727987 16982179 LY180_22575 Escherichia coli LY180 hypothetical protein YP_008567516.1 4726494 R 1335916 CDS YP_008567517.1 544393304 16982180 complement(4728078..4728641) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4728641 16982180 LY180_22580 Escherichia coli LY180 hypothetical protein YP_008567517.1 4728078 R 1335916 CDS YP_008567518.1 544393305 16982181 complement(4728692..4729078) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4729078 16982181 LY180_22585 Escherichia coli LY180 hypothetical protein YP_008567518.1 4728692 R 1335916 CDS YP_008567519.1 544393306 16982182 complement(4729075..4730418) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; restriction endonuclease 4730418 16982182 LY180_22590 Escherichia coli LY180 restriction endonuclease YP_008567519.1 4729075 R 1335916 CDS YP_008567520.1 544393307 16982183 complement(4730411..4732486) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; restriction endonuclease 4732486 16982183 LY180_22595 Escherichia coli LY180 restriction endonuclease YP_008567520.1 4730411 R 1335916 CDS YP_008567521.1 544392692 16982184 complement(4732656..4733528) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; restriction endonuclease 4733528 16982184 LY180_22600 Escherichia coli LY180 restriction endonuclease YP_008567521.1 4732656 R 1335916 CDS YP_008567522.1 544392693 16982185 complement(4733740..4734720) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 9-O-acetyl-N-acetylneuraminic acid deacetylase 4734720 16982185 LY180_22605 Escherichia coli LY180 9-O-acetyl-N-acetylneuraminic acid deacetylase YP_008567522.1 4733740 R 1335916 CDS YP_008567523.1 544392694 16982186 complement(4734785..4735891) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; N-acetylneuraminic acid mutarotase 4735891 16982186 LY180_22610 Escherichia coli LY180 N-acetylneuraminic acid mutarotase YP_008567523.1 4734785 R 1335916 CDS YP_008567524.1 544392695 16982187 complement(4735911..4736627) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; N-acetylneuraminic acid channel protein 4736627 16982187 LY180_22615 Escherichia coli LY180 N-acetylneuraminic acid channel protein YP_008567524.1 4735911 R 1335916 CDS YP_008567525.1 544392696 16982188 4738083..4738685 1 NC_022364.1 inversion of on/off regulator of fimA; Derived by automated computational analysis using gene prediction method: Protein Homology.; tyrosine recombinase 4738685 16982188 LY180_22620 Escherichia coli LY180 tyrosine recombinase YP_008567525.1 4738083 D 1335916 CDS YP_008567526.1 544392697 16982189 4739163..4739759 1 NC_022364.1 inversion of on/off regulator of fimA; Derived by automated computational analysis using gene prediction method: Protein Homology.; tyrosine recombinase 4739759 16982189 LY180_22625 Escherichia coli LY180 tyrosine recombinase YP_008567526.1 4739163 D 1335916 CDS YP_008567527.1 544392698 16982190 4740239..4740787 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; type-1 fimbrial protein subunit A 4740787 fimA 16982190 fimA Escherichia coli LY180 type-1 fimbrial protein subunit A YP_008567527.1 4740239 D 1335916 CDS YP_008567528.1 544392699 16982191 4740852..4741391 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrin fimI 4741391 16982191 LY180_22635 Escherichia coli LY180 fimbrin fimI YP_008567528.1 4740852 D 1335916 CDS YP_008567529.1 544392700 16982192 4741428..4742153 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; molecular chaperone FimC 4742153 16982192 LY180_22640 Escherichia coli LY180 molecular chaperone FimC YP_008567529.1 4741428 D 1335916 CDS YP_008567530.1 544392701 16982193 4742220..4744856 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein FimD 4744856 16982193 LY180_22645 Escherichia coli LY180 fimbrial protein FimD YP_008567530.1 4742220 D 1335916 CDS YP_008567531.1 544392702 16982194 4744866..4745396 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein FimF 4745396 16982194 LY180_22650 Escherichia coli LY180 fimbrial protein FimF YP_008567531.1 4744866 D 1335916 CDS YP_008567532.1 544392703 16982195 4745409..4745912 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein FimG 4745912 16982195 LY180_22655 Escherichia coli LY180 fimbrial protein FimG YP_008567532.1 4745409 D 1335916 CDS YP_008567533.1 544392704 16982196 4745932..4746834 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein FimH 4746834 16982196 LY180_22660 Escherichia coli LY180 fimbrial protein FimH YP_008567533.1 4745932 D 1335916 CDS YP_008567534.1 544392705 16982197 complement(4747077..4748420) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Gnt-II system L-idonate transporter IdnT 4748420 16982197 LY180_22665 Escherichia coli LY180 Gnt-II system L-idonate transporter IdnT YP_008567534.1 4747077 R 1335916 CDS YP_008567535.1 544392706 16982198 4748760..4749944 1 NC_022364.1 catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate; Derived by automated computational analysis using gene prediction method: Protein Homology.; mannonate dehydratase 4749944 16982198 LY180_22670 Escherichia coli LY180 mannonate dehydratase YP_008567535.1 4748760 D 1335916 CDS YP_008567536.1 544392707 16982199 4750025..4751485 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; D-mannonate oxidoreductase 4751485 16982199 LY180_22675 Escherichia coli LY180 D-mannonate oxidoreductase YP_008567536.1 4750025 D 1335916 CDS YP_008567537.1 544393308 16982200 complement(4751507..4751701) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4751701 16982200 LY180_22680 Escherichia coli LY180 hypothetical protein YP_008567537.1 4751507 R 1335916 CDS YP_008567538.1 544392708 16982201 4751700..4752473 1 NC_022364.1 regulates the expression of uxuBA; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4752473 16982201 LY180_22685 Escherichia coli LY180 transcriptional regulator YP_008567538.1 4751700 D 1335916 CDS YP_008567539.1 544392709 16982202 complement(4752614..4753444) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4753444 16982202 LY180_22690 Escherichia coli LY180 hypothetical protein YP_008567539.1 4752614 R 1335916 CDS YP_008567540.1 544392710 16982203 4754117..4754509 1 NC_022364.1 inhibitor of RssB activity in response to DNA damage; blocks degradation of stationary phase sigma factor RpoS; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA replication protein 4754509 iraD 16982203 iraD Escherichia coli LY180 DNA replication protein YP_008567540.1 4754117 D 1335916 CDS YP_008567541.1 544392711 16982204 complement(4754502..4755413) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4755413 16982204 LY180_22700 Escherichia coli LY180 transcriptional regulator YP_008567541.1 4754502 R 1335916 CDS YP_008567542.1 544392712 16982205 complement(4755478..4756650) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; isoaspartyl dipeptidase 4756650 16982205 LY180_22705 Escherichia coli LY180 isoaspartyl dipeptidase YP_008567542.1 4755478 R 1335916 CDS YP_008567543.1 544392713 16982206 complement(4756663..4757124) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4757124 16982206 LY180_22710 Escherichia coli LY180 membrane protein YP_008567543.1 4756663 R 1335916 CDS YP_008567544.1 544393309 16982207 complement(4757121..4757804) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4757804 16982207 LY180_22715 Escherichia coli LY180 hypothetical protein YP_008567544.1 4757121 R 1335916 CDS YP_008567545.1 544393310 16982208 4758054..4758608 1 NC_022364.1 in yeast cells this enzyme removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''-cyclic phosphate; functions in tRNA splicing; the function and substrate of bacterial enzymes in organisms that do not perform splicing is unknown; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; RNA 2'-phosphotransferase 4758608 16982208 LY180_22720 Escherichia coli LY180 RNA 2'-phosphotransferase YP_008567545.1 4758054 D 1335916 CDS YP_008567546.1 544392714 16982209 complement(4758621..4759799) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4759799 16982209 LY180_22725 Escherichia coli LY180 hypothetical protein YP_008567546.1 4758621 R 1335916 CDS YP_008567547.1 544392715 16982210 complement(4759867..4760727) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4760727 16982210 LY180_22730 Escherichia coli LY180 hypothetical protein YP_008567547.1 4759867 R 1335916 CDS YP_008567548.1 544392716 16982211 complement(4760792..4761049) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4761049 16982211 LY180_22735 Escherichia coli LY180 hypothetical protein YP_008567548.1 4760792 R 1335916 CDS YP_008567549.1 544392717 16982212 complement(4761046..4761813) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4761813 16982212 LY180_22740 Escherichia coli LY180 hypothetical protein YP_008567549.1 4761046 R 1335916 CDS YP_008567550.1 544392718 16982213 complement(4761823..4762974) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4762974 16982213 LY180_22745 Escherichia coli LY180 hypothetical protein YP_008567550.1 4761823 R 1335916 CDS YP_008567551.1 544392719 16982214 complement(4763090..4764370) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4764370 16982214 LY180_22750 Escherichia coli LY180 membrane protein YP_008567551.1 4763090 R 1335916 CDS YP_008567552.1 544392720 16982215 complement(4764411..4765643) 1 NC_022364.1 is involved in resistance to acriflavine, chloramphenicol, norfloxacin, ethidium bromide and TPP; Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug transporter 4765643 16982215 LY180_22755 Escherichia coli LY180 multidrug transporter YP_008567552.1 4764411 R 1335916 CDS YP_008567553.1 544392721 16982216 4766110..4767054 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transposase 4767054 16982216 LY180_22760 Escherichia coli LY180 transposase YP_008567553.1 4766110 D 1335916 CDS YP_008567554.1 544393311 16982217 complement(4767296..4768708) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; GntR family transcriptional regulator 4768708 16982217 LY180_22765 Escherichia coli LY180 GntR family transcriptional regulator YP_008567554.1 4767296 R 1335916 CDS YP_008567555.1 544392722 16982218 4768840..4769004 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4769004 16982218 LY180_22770 Escherichia coli LY180 hypothetical protein YP_008567555.1 4768840 D 1335916 CDS YP_008567556.1 544393312 16982219 4769356..4771896 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; penicillin G acylase subunit beta 4771896 16982219 LY180_22775 Escherichia coli LY180 penicillin G acylase subunit beta YP_008567556.1 4769356 D 1335916 CDS YP_008567557.1 544392723 16982220 complement(4771974..4772930) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; GTP-binding protein YjiA 4772930 16982220 LY180_22780 Escherichia coli LY180 GTP-binding protein YjiA YP_008567557.1 4771974 R 1335916 CDS YP_008567558.1 544392724 16982221 complement(4772941..4773144) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4773144 16982221 LY180_22785 Escherichia coli LY180 hypothetical protein YP_008567558.1 4772941 R 1335916 CDS YP_008567559.1 544392725 16982222 complement(4773194..4775344) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; carbon starvation protein CstA 4775344 16982222 LY180_22790 Escherichia coli LY180 carbon starvation protein CstA YP_008567559.1 4773194 R 1335916 CDS YP_008567560.1 544392726 16982223 complement(4775737..4776249) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; FMN reductase 4776249 16982223 LY180_22795 Escherichia coli LY180 FMN reductase YP_008567560.1 4775737 R 1335916 CDS YP_008567561.1 544393313 16982224 complement(4776267..4777829) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; Pyoverdin chromophore biosynthetic protein pvcC 4777829 16982224 LY180_22800 Escherichia coli LY180 Pyoverdin chromophore biosynthetic protein pvcC YP_008567561.1 4776267 R 1335916 CDS YP_008567562.1 544393314 16982225 complement(4778080..4778970) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; 4-hydroxyphenylacetate catabolism protein 4778970 16982225 LY180_22805 Escherichia coli LY180 4-hydroxyphenylacetate catabolism protein YP_008567562.1 4778080 R 1335916 CDS YP_008567563.1 544392727 16982226 complement(4778980..4780356) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; MFS transporter 4780356 16982226 LY180_22810 Escherichia coli LY180 MFS transporter YP_008567563.1 4778980 R 1335916 CDS YP_008567564.1 544392728 16982227 complement(4780531..4781319) 1 NC_022364.1 cleaves 5-dehydro-4-deoxy-glucarate and 2-dehydro-3-deoxy-D-glucarate; Derived by automated computational analysis using gene prediction method: Protein Homology.; alpha-dehydro-beta-deoxy-D-glucarate aldolase 4781319 16982227 LY180_22815 Escherichia coli LY180 alpha-dehydro-beta-deoxy-D-glucarate aldolase YP_008567564.1 4780531 R 1335916 CDS YP_008567565.1 544393315 16982228 complement(4781330..4782133) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; 2-oxo-hept-3-ene-1,7-dioate hydratase 4782133 16982228 LY180_22820 Escherichia coli LY180 2-oxo-hept-3-ene-1,7-dioate hydratase YP_008567565.1 4781330 R 1335916 CDS YP_008567566.1 544393316 16982229 complement(4782244..4782624) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; 5-carboxymethyl-2-hydroxymuconate isomerase 4782624 16982229 LY180_22825 Escherichia coli LY180 5-carboxymethyl-2-hydroxymuconate isomerase YP_008567566.1 4782244 R 1335916 CDS YP_008567567.1 544393317 16982230 complement(4782634..4783485) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; 3,4-dihydroxyphenylacetate 2,3-dioxygenase 4783485 16982230 LY180_22830 Escherichia coli LY180 3,4-dihydroxyphenylacetate 2,3-dioxygenase YP_008567567.1 4782634 R 1335916 CDS YP_008567568.1 544392729 16982231 complement(4783487..4784953) 1 NC_022364.1 catalyzes the formation of 4-aminobutanoate from 4-aminobutanal; involved in putrescine degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.; gamma-aminobutyraldehyde dehydrogenase 4784953 16982231 LY180_22835 Escherichia coli LY180 gamma-aminobutyraldehyde dehydrogenase YP_008567568.1 4783487 R 1335916 CDS YP_008567569.1 544393318 16982232 complement(4784950..4786239) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase 4786239 16982232 LY180_22840 Escherichia coli LY180 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase YP_008567569.1 4784950 R 1335916 CDS YP_008567570.1 544393319 16982233 4786511..4786957 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; homoprotocatechuate degradative operon repressor 4786957 16982233 LY180_22845 Escherichia coli LY180 homoprotocatechuate degradative operon repressor YP_008567570.1 4786511 D 1335916 CDS YP_008567571.1 544392730 16982234 4787076..4788740 1 NC_022364.1 serine sensor receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.; methyl-accepting chemotaxis protein 4788740 16982234 LY180_22850 Escherichia coli LY180 methyl-accepting chemotaxis protein YP_008567571.1 4787076 D 1335916 CDS YP_008567572.1 544392731 16982235 complement(4788789..4790150) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; L-galactonate transporter 4790150 16982235 LY180_22855 Escherichia coli LY180 L-galactonate transporter YP_008567572.1 4788789 R 1335916 CDS YP_008567573.1 544392732 16982236 complement(4790365..4791279) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; GntR family transcriptional regulator 4791279 16982236 LY180_22860 Escherichia coli LY180 GntR family transcriptional regulator YP_008567573.1 4790365 R 1335916 CDS YP_008567574.1 544392733 16982237 4791418..4792440 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; galactonate oxidoreductase 4792440 16982237 LY180_22865 Escherichia coli LY180 galactonate oxidoreductase YP_008567574.1 4791418 D 1335916 CDS YP_008567575.1 544392734 16982238 complement(4792579..4794870) 1 NC_022364.1 catalyzes the transfer of phosphoglycerol to the glucan backbone; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoglycerol transferase 4794870 16982238 LY180_22870 Escherichia coli LY180 phosphoglycerol transferase YP_008567575.1 4792579 R 1335916 CDS YP_008567576.1 544392735 16982239 complement(4795124..4795621) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4795621 16982239 LY180_22875 Escherichia coli LY180 hypothetical protein YP_008567576.1 4795124 R 1335916 CDS YP_008567577.1 544392736 16982240 complement(4795667..4796404) 1 NC_022364.1 acts to load the DnaB helicase onto the initiation site during DNA replication; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA replication protein DnaC 4796404 16982240 LY180_22880 Escherichia coli LY180 DNA replication protein DnaC YP_008567577.1 4795667 R 1335916 CDS YP_008567578.1 544392737 16982241 complement(4796407..4796946) 1 NC_022364.1 This protein is required for primosome-dependent normal DNA replication; it is also involved in inducing stable DNA replication during SOS response. It forms, in concert with dnaB protein and other prepriming proteins dnaC, N, N', N'' a prepriming protein complex on the specific site of the template DNA recognized by protein N'; Derived by automated computational analysis using gene prediction method: Protein Homology.; primosomal protein DnaI 4796946 16982241 LY180_22885 Escherichia coli LY180 primosomal protein DnaI YP_008567578.1 4796407 R 1335916 CDS YP_008567579.1 544392738 16982242 complement(4797053..4797526) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4797526 16982242 LY180_22890 Escherichia coli LY180 hypothetical protein YP_008567579.1 4797053 R 1335916 CDS YP_008567580.1 544392739 16982243 complement(4797517..4798287) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4798287 16982243 LY180_22895 Escherichia coli LY180 membrane protein YP_008567580.1 4797517 R 1335916 CDS YP_008567581.1 544392740 16982244 4798906..4799631 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LuxR family transcriptional regulator 4799631 16982244 LY180_22900 Escherichia coli LY180 LuxR family transcriptional regulator YP_008567581.1 4798906 D 1335916 CDS YP_008567582.1 544393320 16982245 4799643..4800266 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4800266 16982245 LY180_22905 Escherichia coli LY180 hypothetical protein YP_008567582.1 4799643 D 1335916 CDS YP_008567583.1 544392741 16982246 complement(4800304..4801092) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ferric iron reductase involved in ferric hydroximate transport 4801092 16982246 LY180_22910 Escherichia coli LY180 ferric iron reductase involved in ferric hydroximate transport YP_008567583.1 4800304 R 1335916 CDS YP_008567584.1 544392742 16982247 4801194..4801469 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4801469 16982247 LY180_22915 Escherichia coli LY180 hypothetical protein YP_008567584.1 4801194 D 1335916 CDS YP_008567585.1 544392743 16982251 complement(4802098..4803129) 1 NC_022364.1 16S rRNA M2G1207 methyltransferase; one of many enzymes that modify bases of the ribosomal RNA; this enzyme methylates the G at position 1207 of the small ribosomal subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.; 16S rRNA methyltransferase 4803129 rsmC 16982251 rsmC Escherichia coli LY180 16S rRNA methyltransferase YP_008567585.1 4802098 R 1335916 CDS YP_008567586.1 544392744 16982254 4803232..4803645 1 NC_022364.1 with the chi subunit binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA polymerase III subunit psi 4803645 16982254 LY180_22940 Escherichia coli LY180 DNA polymerase III subunit psi YP_008567586.1 4803232 D 1335916 CDS YP_008567587.1 544392745 16982255 4803614..4804060 1 NC_022364.1 alanine acetyltransferase that specifically acetylates ribosomal protein S18; Derived by automated computational analysis using gene prediction method: Protein Homology.; alanine acetyltransferase 4804060 rimI 16982255 rimI Escherichia coli LY180 alanine acetyltransferase YP_008567587.1 4803614 D 1335916 CDS YP_008567588.1 544392746 16982256 4804075..4804752 1 NC_022364.1 manganese-dependent 5'-nucleotidase; specific for 5'-UMP, 5'-dUMP, and 5'-dTMP; member of haloacid dehalogenase (HAD)-like hydrolase superfamily; Derived by automated computational analysis using gene prediction method: Protein Homology.; dUMP phosphatase 4804752 16982256 LY180_22950 Escherichia coli LY180 dUMP phosphatase YP_008567588.1 4804075 D 1335916 CDS YP_008567589.1 544393321 16982257 4804843..4806432 1 NC_022364.1 stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; peptide chain release factor 3 4806432 prfC 16982257 prfC Escherichia coli LY180 peptide chain release factor 3 YP_008567589.1 4804843 D 1335916 CDS YP_008567590.1 544392747 16982258 4806825..4807430 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4807430 16982258 LY180_22960 Escherichia coli LY180 hypothetical protein YP_008567590.1 4806825 D 1335916 CDS YP_008567591.1 544393322 16982259 4807557..4807718 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 4807718 16982259 LY180_22965 Escherichia coli LY180 membrane protein YP_008567591.1 4807557 D 1335916 CDS YP_008567592.1 544392748 16982260 4807840..4808913 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4808913 16982260 LY180_22970 Escherichia coli LY180 hypothetical protein YP_008567592.1 4807840 D 1335916 CDS YP_008567593.1 544392749 16982261 4808910..4809692 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; deoxyribonuclease 4809692 16982261 LY180_22975 Escherichia coli LY180 deoxyribonuclease YP_008567593.1 4808910 D 1335916 CDS YP_008567594.1 544392750 16982262 complement(4809805..4810668) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4810668 16982262 LY180_22980 Escherichia coli LY180 hypothetical protein YP_008567594.1 4809805 R 1335916 CDS YP_008567595.1 544392751 16982263 complement(4810640..4812190) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4812190 16982263 LY180_22985 Escherichia coli LY180 hypothetical protein YP_008567595.1 4810640 R 1335916 CDS YP_008567596.1 544393323 16982264 4812242..4812343 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4812343 16982264 LY180_22990 Escherichia coli LY180 hypothetical protein YP_008567596.1 4812242 D 1335916 CDS YP_008567597.1 544392752 16982265 4812448..4813227 1 NC_022364.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; deoxyribose-phosphate aldolase 4813227 16982265 LY180_22995 Escherichia coli LY180 deoxyribose-phosphate aldolase YP_008567597.1 4812448 D 1335916 CDS YP_008567598.1 544392753 16982266 4813354..4814676 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; thymidine phosphorylase 4814676 16982266 LY180_23000 Escherichia coli LY180 thymidine phosphorylase YP_008567598.1 4813354 D 1335916 CDS YP_008567599.1 544392754 16982267 4814728..4815951 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphopentomutase 4815951 16982267 LY180_23005 Escherichia coli LY180 phosphopentomutase YP_008567599.1 4814728 D 1335916 CDS YP_008567600.1 544392755 16982268 4816031..4816750 1 NC_022364.1 catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; purine nucleoside phosphorylase 4816750 deoD 16982268 deoD Escherichia coli LY180 purine nucleoside phosphorylase YP_008567600.1 4816031 D 1335916 CDS YP_008567601.1 544392756 16982270 complement(4817206..4818222) 1 NC_022364.1 Catalyzes both the ATP-dependent activation of exogenously supplied lipoate to lipoyl-AMP and the transfer of the activated lipoyl on the lipoate-dependent enzymes. Creates an amide linkage that joins the free carboxyl group of lipoic acid to the epsilon-amino group of a specific lysine residue in lipoyl domain of apoproteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; lipoate-protein ligase A 4818222 lplA 16982270 lplA Escherichia coli LY180 lipoate-protein ligase A YP_008567601.1 4817206 R 1335916 CDS YP_008567602.1 544392757 16982271 complement(4818250..4818894) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4818894 16982271 LY180_23025 Escherichia coli LY180 membrane protein YP_008567602.1 4818250 R 1335916 CDS YP_008567603.1 544392758 16982272 4819000..4819968 1 NC_022364.1 catalyzes the formation of serine from O-phosphoserine; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoserine phosphatase 4819968 serB 16982272 serB Escherichia coli LY180 phosphoserine phosphatase YP_008567603.1 4819000 D 1335916 CDS YP_008567604.1 544392759 16982273 4820017..4821399 1 NC_022364.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA repair protein RadA 4821399 16982273 LY180_23035 Escherichia coli LY180 DNA repair protein RadA YP_008567604.1 4820017 D 1335916 CDS YP_008567605.1 544392760 16982274 4821420..4822652 1 NC_022364.1 catalyzes the formation of NAD(+) from nicotinamide ribonucleotide; catalyzes the formation of nicotinamide mononucleotide from nicotinamide riboside; also has a regulatory function; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4822652 16982274 LY180_23040 Escherichia coli LY180 transcriptional regulator YP_008567605.1 4821420 D 1335916 CDS YP_008567606.1 544392761 16982275 complement(4822959..4824626) 1 NC_022364.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; Derived by automated computational analysis using gene prediction method: Protein Homology.; heme ABC transporter ATP-binding protein 4824626 16982275 LY180_23045 Escherichia coli LY180 heme ABC transporter ATP-binding protein YP_008567606.1 4822959 R 1335916 CDS YP_008567607.1 544392762 16982276 4824837..4826774 1 NC_022364.1 catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine residues in peptidoglycan; Derived by automated computational analysis using gene prediction method: Protein Homology.; lytic murein transglycosylase 4826774 16982276 LY180_23050 Escherichia coli LY180 lytic murein transglycosylase YP_008567607.1 4824837 D 1335916 CDS YP_008567608.1 544392763 16982277 4826864..4827190 1 NC_022364.1 When complexed with L-tryptophan it binds the operator region of the trp operon and prevents the initiation of transcription; Derived by automated computational analysis using gene prediction method: Protein Homology.; Trp operon repressor 4827190 16982277 LY180_23055 Escherichia coli LY180 Trp operon repressor YP_008567608.1 4826864 D 1335916 CDS YP_008567609.1 544392764 16982278 complement(4827232..4827753) 1 NC_022364.1 pyrophosphatase; has activity against dUTP and dITP; the crystal structure of the Vibrio protein showed similarity to Methanococcus janaschii Mj0226; in Vibrio cholerae this gene is part of the Mba operon that is involved in regulation and maintenance of biofilms; in Escherichia coli overexpression of this gene leads to resistance to an HMP analog; Derived by automated computational analysis using gene prediction method: Protein Homology.; inosine/xanthosine triphosphatase 4827753 yjjX 16982278 yjjX Escherichia coli LY180 inosine/xanthosine triphosphatase YP_008567609.1 4827232 R 1335916 CDS YP_008567610.1 544392765 16982279 4827796..4828443 1 NC_022364.1 catalyzes reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoglycerate mutase 4828443 16982279 LY180_23065 Escherichia coli LY180 phosphoglycerate mutase YP_008567610.1 4827796 D 1335916 CDS YP_008567611.1 544392766 16982280 complement(4828440..4829309) 1 NC_022364.1 AraC family; binds to the right arm of the replication origin oriC; Derived by automated computational analysis using gene prediction method: Protein Homology.; right origin-binding protein 4829309 16982280 LY180_23070 Escherichia coli LY180 right origin-binding protein YP_008567611.1 4828440 R 1335916 CDS YP_008567612.1 544392767 16982281 4829520..4829993 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4829993 16982281 LY180_23075 Escherichia coli LY180 hypothetical protein YP_008567612.1 4829520 D 1335916 CDS YP_008567613.1 544392768 16982282 4830006..4830695 1 NC_022364.1 response regulator in two-component regulatory system with CreC; CreB protein is phosphorylated by sensor protein phospho-CreC; involved in catabolic regulation; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4830695 16982282 LY180_23080 Escherichia coli LY180 transcriptional regulator YP_008567613.1 4830006 D 1335916 CDS YP_008567614.1 544392769 16982283 4830695..4832119 1 NC_022364.1 part of a two-component regulatory system with CreB or PhoB; involved in catabolic regulation; Derived by automated computational analysis using gene prediction method: Protein Homology.; sensory histidine kinase 4832119 16982283 LY180_23085 Escherichia coli LY180 sensory histidine kinase YP_008567614.1 4830695 D 1335916 CDS YP_008567615.1 544392770 16982284 4832177..4833529 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4833529 16982284 LY180_23090 Escherichia coli LY180 membrane protein YP_008567615.1 4832177 D 1335916 CDS YP_008567616.1 544392771 16982285 complement(4833589..4834305) 1 NC_022364.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4834305 16982285 LY180_23095 Escherichia coli LY180 transcriptional regulator YP_008567616.1 4833589 R 1335916 CDS