-- dump date   	20140619_085716
-- class       	Genbank::Gene
-- table       	gene_note
-- id	note
6966442	transcriptional regulator; this gene contains a frame shift which may be the result of sequencing error
6966388	PapX; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF01047
6966485	putative IS orf, fragment; this gene contains a frame shift which may be the result of sequencing error
6966475	replication initiation protein (Protein rep) (Protein E) (Protein F4); this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF01051
6966406	w0059; this gene contains a frame shift which may be the result of sequencing error
6966445	w0062; this gene contains a frame shift which may be the result of sequencing error
6966394	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6966421	transposase InsF for insertion sequence IS3A/B/C/D/E/fA; this region contains one or more premature stops and/or frameshifts
6966488	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6966396	conserved domain protein; this gene contains a frame shift which may be the result of sequencing error
6966436	IS911, transposase orfB; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00665
6966531	zinc metalloproteinase Mpr protein; this gene contains a premature stop which may be the result of sequencing error
6967545	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6969703	fimbrial usher protein; this gene contains a premature stop which may be the result of sequencing error
6970359	fimbrial usher protein; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF00577
6971678	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6971310	hypothetical protein; this gene contains a premature stop which may be the result of sequencing error; identified by glimmer
6969659	conserved hypothetical protein; this gene contains a premature stop which may be the result of sequencing error
6969256	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6966629	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF06744; match to protein family HMM PF06761; match to protein family HMM TIGR03348
6971149	conserved hypothetical protein; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF05943; match to protein family HMM TIGR03355
6972145	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6970066	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6971575	addiction module toxin component YafQ; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM TIGR02385
6966863	conserved hypothetical protein; this gene contains a premature stop which may be the result of sequencing error
6967217	replication protein O; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF04492
6968506	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6967277	conserved hypothetical protein; this gene contains a premature stop which may be the result of sequencing error
6967908	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6970934	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6971054	conserved hypothetical protein; this gene contains a premature stop which may be the result of sequencing error
6969201	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6971495	adhesin; this gene contains a frame shift which may be the result of sequencing error
6967453	HTH luxR-type DNA-binding domain protein; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF00196
6967550	site-specific recombinase, phage integrase family; this gene contains a frame shift which may be the result of sequencing error
6966753	site-specific recombinase, phage integrase family; this gene contains a frame shift which may be the result of sequencing error
6967935	transcriptional regulator, LysR family; this gene contains a frame shift which may be the result of sequencing error
6971433	transcriptional regulator, LysR family protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00126
6970652	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF06496
6970930	outer membrane autotransporter barrel domain protein; this gene contains a frame shift which may be the result of sequencing error
6970549	outer membrane autotransporter barrel domain protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF03797; match to protein family HMM TIGR01414
6971977	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6969433	hypothetical protein; this gene contains a frame shift which may be the result of sequencing error; identified by glimmer
6968065	ATP-dependent Clp protease, proteolytic subunit ClpP; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00574; match to protein family HMM TIGR00493
6966749	BNR/Asp-box repeat domain protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF02012
6967687	FG-GAP repeat domain protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00353
6972326	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6969553	transposase, IS481 family; this gene contains a frame shift which may be the result of sequencing error
6970589	allantoinase; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM TIGR03178
6969871	allantoinase (Allantoin-utilizing enzyme); this gene contains a premature stop which may be the result of sequencing error
6969429	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6972232	Hok/Gef family protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF01848
6970943	hypothetical protein; this region contains one or more premature stops and/or frameshifts;identified by glimmer
6966976	hypothetical protein; this gene contains a frame shift which may be the result of sequencing error; identified by glimmer
6969124	conserved hypothetical protein; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF08238
6969025	hypothetical protein; this gene contains a premature stop which may be the result of sequencing error; identified by glimmer
6968068	DnaJ domain protein; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF00226
6968084	DnaJ domain protein; this gene contains a premature stop which may be the result of sequencing error
6970315	outer membrane porin, OprD family; this gene contains a frame shift which may be the result of sequencing error
6971274	outer membrane porin; this gene contains a frame shift which may be the result of sequencing error
6967311	endonuclease VIII; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF01149; match to protein family HMM PF06831
6967231	conserved hypothetical protein; this gene contains a premature stop which may be the result of sequencing error
6968846	conserved domain protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF04971
6969623	phage portal protein, lambda family; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF05136; match to protein family HMM TIGR01539
6970745	bacteriophage portal protein; this gene contains a frame shift which may be the result of sequencing error
6969841	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6969750	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6969085	formate C-acetyltransferase 3; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF01228; match to protein family HMM PF02901; match to protein family HMM TIGR01774
6967238	formate acetyltransferase 3 (Pyruvate formate-lyase 3); this gene contains a frame shift which may be the result of sequencing error
6969850	L-asparaginase; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF01112
6968552	isoaspartyl peptidase (ecaiii) (beta-aspartyl-peptidase) (isoaspartyl dipeptidase); this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF01112
6969950	putrescine transporter subunit: periplasmic-binding component of ABC family protein; this gene contains a frame shift which may be the result of sequencing error
6969735	PTS system enzyme IIB; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF02302
6970807	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6971590	conserved domain protein; this region contains one or more premature stops and/or frameshifts
6967825	outer membrane usher protein FimD; this gene contains a frame shift which may be the result of sequencing error
6968463	outer membrane usher protein fimD homolog; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00577
6969078	fimbrial protein; this gene contains a premature stop which may be the result of sequencing error
6972183	gram-negative pili assembly chaperone, N- domain; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00345
6967230	periplasmic pilus chaperone family protein; this gene contains a frame shift which may be the result of sequencing error
6970886	conserved hypothetical protein; this region contains one or more premature stops and/or frameshifts
6968902	site-specific recombinase, phage integrase family; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00589
6971787	site-specific recombinase, phage integrase family; this gene contains a frame shift which may be the result of sequencing error
6968381	conserved hypothetical protein; this gene contains a premature stop which may be the result of sequencing error
6967028	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF07151
6967588	conserved hypothetical protein; this gene contains a premature stop which may be the result of sequencing error
6970138	conserved hypothetical protein; this region contains one or more premature stops and/or frameshifts
6971288	Tail fiber assembly protein homolog from lambdoid prophage; this gene contains a frame shift which may be the result of sequencing error
6971910	phage terminase large subunit (GpA); this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF05876
6968090	tir-cytoskeleton coupling protein; this gene contains a frame shift which may be the result of sequencing error
6972417	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6969139	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6968618	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6968652	protein RutC (Pyrimidine utilization protein C); this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF01042
6969243	hypothetical protein; this gene contains a premature stop which may be the result of sequencing error; identified by glimmer
6967265	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6968801	usher CupA3; this gene contains a frame shift which may be the result of sequencing error
6968266	fimbrial biogenesis outer membrane usher protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00577
6967036	transposase; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF03400
6968551	restriction enzyme beta subunit; this gene contains a frame shift which may be the result of sequencing error
6970751	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6972226	urease accessory protein UreD; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF01774
6971858	transposase, IS66 family; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF05717
6971024	conserved hypothetical protein; this region contains one or more premature stops and/or frameshifts
6971217	transposase OrfB; this gene contains a frame shift which may be the result of sequencing error
6970564	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6969918	conserved domain protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF05930
6969326	hypothetical protein; this region contains one or more premature stops and/or frameshifts;identified by glimmer
6971119	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6971776	hypothetical protein; this gene contains a frame shift which may be the result of sequencing error; identified by glimmer
6967716	transposase; this gene contains a frame shift which may be the result of sequencing error
6971181	hypothetical protein; this gene contains a frame shift which may be the result of sequencing error; identified by glimmer
6971070	multidrug resistance protein MdtG; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF07690
6972323	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF02620
6970441	conserved hypothetical protein; this gene contains a premature stop which may be the result of sequencing error
6970583	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6968592	major tail protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF07679
6968984	IS2, transposase orfA; this gene contains a premature stop which may be the result of sequencing error
6972220	IS2 ORF1; this gene contains a premature stop which may be the result of sequencing error
6968594	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6967757	hypothetical bacteriophage protein; this gene contains a frame shift which may be the result of sequencing error
6969076	conserved hypothetical protein; this gene contains a premature stop which may be the result of sequencing error
6968036	recombinase family protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00239; match to protein family HMM PF07508
6971219	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6967522	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6966704	conserved hypothetical protein; this region contains one or more premature stops and/or frameshifts
6970883	hypothetical protein; this gene contains a premature stop which may be the result of sequencing error; identified by glimmer
6971854	membrane protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF06790
6971883	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF06254
6968548	conserved hypothetical protein; this region contains one or more premature stops and/or frameshifts; identified by match to protein family HMM PF07789
6972345	YjhS; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF08410
6968870	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6971483	conserved hypothetical protein; this region contains one or more premature stops and/or frameshifts
6969645	phage minor tail protein G; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF06894; match to protein family HMM TIGR01674
6968248	tail assembly protein; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF00877
6970865	integrase; this region contains one or more premature stops and/or frameshifts; identified by match to protein family HMM PF00589
6967795	transposase for insertion sequence element isrm3; this region contains one or more premature stops and/or frameshifts
6970352	ISSod4, transposase; this region contains one or more premature stops and/or frameshifts
6969248	conserved domain protein; this region contains one or more premature stops and/or frameshifts
6970715	transposase; this region contains one or more premature stops and/or frameshifts
6970110	transposase; this region contains one or more premature stops and/or frameshifts
6971937	IS630 transposase; this region contains one or more premature stops and/or frameshifts
6970941	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6971588	conserved hypothetical protein; this gene contains a premature stop which may be the result of sequencing error
6970721	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6968125	conserved hypothetical protein; this gene contains a premature stop which may be the result of sequencing error
6967120	sensory box-containing diguanylate cyclase/cyclic diguanylate phosphodiesterase; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00563
6972066	protein gmr; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254
6970107	multidrug efflux transport protein EefB; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00873; match to protein family HMM TIGR00915
6967147	alpha amylase family protein; this gene contains a frame shift which may be the result of sequencing error
6966832	sucrose phosphorylase (Sucroseglucosyltransferase); this gene contains a frame shift which may be the result of sequencing error
6968697	sugar ABC transporter periplasmic sugar-binding protein; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF01547
6966722	sugar-binding periplasmic protein; this gene contains a premature stop which may be the result of sequencing error
6968768	alpha/beta superfamily hydrolase; this gene contains a frame shift which may be the result of sequencing error
6969965	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6970155	outer membrane protein N; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00267
6970234	outer membrane protein N (Porin OmpN); this gene contains a frame shift which may be the result of sequencing error
6967888	hypothetical protein; this gene contains a premature stop which may be the result of sequencing error; identified by glimmer
6969062	autotransporter beta-domain protein; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF03797
6969101	ribosomal-protein-serine acetyltransferase; this gene contains a premature stop which may be the result of sequencing error
6969899	ribosomal-protein-serine acetyltransferase (Acetylatingenzyme for N- of ribosomal protein L7/L12); this gene contains a premature stop which may be the result of sequencing error
6969748	benzoate membrane transport protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF03594
6970772	inner membrane protein YdcO; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF03594; match to protein family HMM TIGR00843
6968627	dsORF-e4; this gene contains a frame shift which may be the result of sequencing error
6970689	hypothetical protein; this gene contains a frame shift which may be the result of sequencing error; identified by glimmer
6970493	ISEc4, transposase; this gene contains a premature stop which may be the result of sequencing error
6970431	transposase (IS4 family); this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF01609
6971338	flavin reductase domain protein; this gene contains a premature stop which may be the result of sequencing error
6967276	N-hydroxyarylamine O-acetyltransferase; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00797
6967182	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6967948	conserved domain protein; this gene contains a frame shift which may be the result of sequencing error
6969316	leucine Rich Repeat domain protein; this gene contains a frame shift which may be the result of sequencing error
6969604	formate dehydrogenase, nitrate inducible, alpha subunit, selenocysteine-containing; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF04879; match to protein family HMM TIGR01409
6970417	formate dehydrogenase, nitrate inducible, alpha subunit, selenocysteine-containing; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM TIGR01553
6971779	heme-regulated cyclic AMP phosphodiesterase; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00563; match to protein family HMM PF00990
6971129	heme-regulated cyclic di-GMP, cyclic AMP phosphodiesterase, (Direct oxygen sensor protein) (Ec DOS); this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00989; match to protein family HMM PF08448; match to protein family HMM TIGR00229
6967949	sulfatase; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF00884
6971879	outer membrane autotransporter domain protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF03212; match to protein family HMM PF03797; match to protein family HMM TIGR01414
6970780	conserved hypothetical protein; this gene contains a premature stop which may be the result of sequencing error
6968793	conserved hypothetical protein; this gene contains a premature stop which may be the result of sequencing error
6969792	portal protein for prophage CP-933V; this gene contains a frame shift which may be the result of sequencing error
6969235	phage portal protein, HK97 family; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF04860; match to protein family HMM TIGR01537
6970846	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6967450	crossover junction endodeoxyribonuclease RusA (Hollidayjunction nuclease rusA) (Holliday junction resolvase) (Gp67); this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF05866
6968147	hypothetical protein; this gene contains a premature stop which may be the result of sequencing error; identified by glimmer
6966686	exodeoxyribonuclease 8 (exodeoxyribonuclease viii) (exoviii); this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF06630
6968920	integrase family protein; this gene contains a frame shift which may be the result of sequencing error
6971553	host specificity protein J; this gene contains a frame shift which may be the result of sequencing error
6969533	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00041; match to protein family HMM PF09327
6971753	major tail protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF07679
6971985	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6970766	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6968677	TerB; this gene contains a frame shift which may be the result of sequencing error
6972061	conserved hypothetical protein; this gene contains a premature stop which may be the result of sequencing error
6968371	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF07789
6971108	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6968186	conserved domain protein; this gene contains a frame shift which may be the result of sequencing error
6971514	membrane-associated protein UidC; this gene contains a frame shift which may be the result of sequencing error
6971752	membrane-associated protein UidC; this gene contains a frame shift which may be the result of sequencing error
6967301	beta-glucuronidase UidA; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF02836
6966868	beta-glucuronidase (GUS) (Beta-D-glucuronosideglucuronosohydrolase); this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00703; match to protein family HMM PF02837
6967142	oxidoreductase YdhF; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF00248
6967681	short-chain-fatty-acid--CoA ligase; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00501
6970230	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6971797	hypothetical protein; this gene contains a frame shift which may be the result of sequencing error; identified by glimmer
6967838	tail fiber protein of prophage CP-933T; this gene contains a frame shift which may be the result of sequencing error
6967216	tail protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM TIGR01760
6969067	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6972023	membrane protein; this gene contains a frame shift which may be the result of sequencing error
6969812	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6969707	outer membrane protein N (Porin OmpN); this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00267
6966716	outer membrane protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00267
6970648	phage terminase large subunit (GpA); this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF05876
6969987	Tail fiber assembly protein homolog from lambdoid prophage; this gene contains a frame shift which may be the result of sequencing error
6968241	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6971523	TerB; this gene contains a frame shift which may be the result of sequencing error
6969506	conserved hypothetical protein; this gene contains a premature stop which may be the result of sequencing error
6968268	cobinamide kinase/cobinamide phosphate guanyltransferase; this gene contains a frame shift which may be the result of sequencing error
6969795	bifunctional adenosylcobalamin biosynthesis protein CobU; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF02283
6967041	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF06755
6971815	conserved domain protein; this gene contains a premature stop which may be the result of sequencing error
6971450	minor tail protein; this region contains one or more premature stops and/or frameshifts; identified by match to protein family HMM TIGR01600
6968865	minor tail protein; this region contains one or more premature stops and/or frameshifts; identified by match to protein family HMM TIGR01600
6969974	Upf89.0; this gene contains a frame shift which may be the result of sequencing error
6968802	valyl-tRNA synthetase; this region contains one or more premature stops and/or frameshifts
6970413	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6971121	sensory box-containing diguanylate cyclase; this gene contains a frame shift which may be the result of sequencing error
6970750	PAS fold family protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254
6968314	phage tail protein, P2 GpE family; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF06528
6967303	phage tail protein E; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF06158
6968494	regulator; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF05406
6970015	molybdate metabolism regulator; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF05406
6972063	molybdate metabolism regulator; this gene contains a frame shift which may be the result of sequencing error
6970035	conserved hypothetical protein; this gene contains a premature stop which may be the result of sequencing error
6967932	YehO; this gene contains a premature stop which may be the result of sequencing error
6967867	phage minor tail protein G; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF06894; match to protein family HMM TIGR01674
6969713	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6971646	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6968547	conserved hypothetical protein; this gene contains a premature stop which may be the result of sequencing error
6967096	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6968757	conserved hypothetical protein; this gene contains a premature stop which may be the result of sequencing error
6972002	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6969493	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6972392	conserved domain protein; this gene contains a frame shift which may be the result of sequencing error
6970129	replication protein P; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF06992
6970607	Upf89.0; this gene contains a frame shift which may be the result of sequencing error
6969800	valyl-tRNA synthetase; this region contains one or more premature stops and/or frameshifts
6972115	valyl-tRNA synthetase; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF04448
6969022	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6969222	conserved hypothetical protein; this gene contains a premature stop which may be the result of sequencing error
6968388	conserved hypothetical protein; this gene contains a premature stop which may be the result of sequencing error
6970799	HpcH/HpaI aldolase/citrate lyase family protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF03328
6967693	peptidase, M28A family; this gene contains a frame shift which may be the result of sequencing error
6967905	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6968624	conserved hypothetical protein; this gene contains a premature stop which may be the result of sequencing error
6970760	conserved hypothetical protein; this region contains one or more premature stops and/or frameshifts
6970183	hypothetical protein; this gene contains a frame shift which may be the result of sequencing error; identified by glimmer
6967621	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6969182	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6972435	conserved domain protein; this gene contains a frame shift which may be the result of sequencing error
6969228	conserved hypothetical protein; this gene contains a premature stop which may be the result of sequencing error
6970551	conserved hypothetical protein; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF04448
6968403	oligosaccharide:H+ symporter; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF01306; match to protein family HMM TIGR00882
6970676	CAIB/BAIF family protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF02515
6970054	CaiB/BaiF family protein; this gene contains a frame shift which may be the result of sequencing error
6966824	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6966839	hypothetical protein; this gene contains a premature stop which may be the result of sequencing error; identified by glimmer
6971916	3-phenylpropionate dioxygenase alpha subunit; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00355; match to protein family HMM PF00848
6968858	oxidoreductase, zinc-binding dehydrogenase family; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF00107; match to protein family HMM PF08240
6968227	conserved hypothetical protein; this gene contains a premature stop which may be the result of sequencing error
6968095	CBS/transporter associated domain protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF01595
6966755	CBS/transporter associated domain protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF03471
6971792	molecular chaparone; heat shock protein; this gene contains a frame shift which may be the result of sequencing error
6969309	site specific recombinase; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00589
6970283	conserved hypothetical protein, trunscation; this gene contains a premature stop which may be the result of sequencing error
6972423	alpha amylase family protein; this gene contains a premature stop which may be the result of sequencing error
6968978	conserved hypothetical protein; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF02806
6970917	PTS system, glucitol/sorbitol-specific, IIC component; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF03608; match to protein family HMM TIGR00821
6969212	glucitol/sorbitol permease iic component (pts systemglucitol/sorbitol-specific eiic component) (eiic-gut); this gene contains a frame shift which may be the result of sequencing error
6968559	PTS system, glucitol/sorbitol-specific, IIB component; this gene contains a frame shift which may be the result of sequencing error
6967726	glucitol/sorbitol-specific phosphotransferase enzyme iib component (pts system glucitol/sorbitol-specific eiib component)(eii-gut); this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF07663
6967933	hypothetical protein; this gene contains a frame shift which may be the result of sequencing error; identified by glimmer
6967101	electron transfer flavoprotein; this gene contains a premature stop which may be the result of sequencing error
6966923	electron transfer flavoprotein; this gene contains a premature stop which may be the result of sequencing error
6971687	major facilitator family transporter; this gene contains a frame shift which may be the result of sequencing error
6969657	inner membrane metabolite transport protein YgcS; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00083; match to protein family HMM PF07690
6969324	conserved hypothetical protein; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF04536
6968766	glucarate dehydratase; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF01188
6968141	glucarate dehydratase (GDH) (GlucD); this gene contains a premature stop which may be the result of sequencing error
6970123	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6969161	hypothetical protein; this gene contains a frame shift which may be the result of sequencing error; identified by glimmer
6966937	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6970912	type III secretion apparatus protein EprH; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF09480
6970818	type III secretion apparatus protein EpaR; this gene contains a premature stop which may be the result of sequencing error
6969055	conserved hypothetical protein; this gene contains a premature stop which may be the result of sequencing error
6970374	type III secretion apparatus protein EpaO; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF01052; match to protein family HMM TIGR02551
6968816	conserved hypothetical protein; this gene contains a premature stop which may be the result of sequencing error
6971107	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6972062	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6967701	4Fe-4S binding protein; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF00037
6969171	peptide chain release factor 2; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00472; match to protein family HMM PF03462; match to protein family HMM TIGR00020
6970915	conserved domain protein; this region contains one or more premature stops and/or frameshifts
6970284	transcriptional regulator, LysR family; this gene contains a premature stop which may be the result of sequencing error
6972205	transcriptional regulator, LysR family protein; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF00126
6968574	ISSfl3 OrfC,D; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF03050
6967659	ISEc13 transposase; this gene contains a premature stop which may be the result of sequencing error
6971886	ISEc13 transposase; this region contains one or more premature stops and/or frameshifts
6968610	conserved hypothetical protein; this region contains one or more premature stops and/or frameshifts
6967981	transposase; this gene contains a premature stop which may be the result of sequencing error
6967984	ehec factor for adherence; this gene contains a frame shift which may be the result of sequencing error
6970068	Efa1-LifA protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF04488
6967751	IS66 family element, transposase; this gene contains a frame shift which may be the result of sequencing error
6970242	IS66 family element, transposase; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF03050
6968545	hypothetical protein; this gene contains a frame shift which may be the result of sequencing error; identified by glimmer
6969308	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6971606	inner membrane protein; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF07290
6967474	hypothetical protein; this region contains one or more premature stops and/or frameshifts;identified by glimmer
6970262	PTS system, N-acetylgalactosamine-specific EIIC component; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF03609
6969877	galactosamine-6-phosphate isomerase; this gene contains a premature stop which may be the result of sequencing error
6968908	galactosamine-6-phosphate isomerase; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF01182
6971403	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6967273	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6970212	C4-dicarboxylate carrier protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF03606; match to protein family HMM TIGR00771
6967774	hypothetical protein; this region contains one or more premature stops and/or frameshifts;identified by glimmer
6970136	acriflavine resistance protein F; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF00873; match to protein family HMM TIGR00915
6967755	acriflavine resistance protein F (Protein EnvD); this gene contains a premature stop which may be the result of sequencing error
6969505	glutathione-regulated potassium-efflux system protein KefB; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF00999; match to protein family HMM PF02254; match to protein family HMM TIGR00932
6971356	kinase, pfkB family; this gene contains a premature stop which may be the result of sequencing error
6972184	fructoselysine kinase; this gene contains a premature stop which may be the result of sequencing error
6970291	HofM protein; this gene contains a frame shift which may be the result of sequencing error
6971072	ATP-dependent DNA helicase, RecQ family; this gene contains a frame shift which may be the result of sequencing error
6970483	ATP-dependent DNA helicase, RecQ family; this region contains one or more premature stops and/or frameshifts
6969715	ATP-dependent DNA helicase, RecQ family; this region contains one or more premature stops and/or frameshifts; identified by match to protein family HMM PF00271
6968937	ATP-dependent DNA helicase, RecQ family; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00270
6966741	phospholipid biosynthesis acyltransferase; this gene contains a premature stop which may be the result of sequencing error
6967014	phospholipid/glycerol acyltransferase; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF01553
6969589	AMP-dependent synthetase and ligase; this gene contains a premature stop which may be the result of sequencing error
6967141	AMP-dependent synthetase and ligase; this gene contains a premature stop which may be the result of sequencing error
6971946	conserved hypothetical protein; this gene contains a premature stop which may be the result of sequencing error
6971200	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6968081	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6968376	YhjQ protein; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF06564; match to protein family HMM TIGR03371
6969178	cell division protein; this gene contains a premature stop which may be the result of sequencing error
6967712	hypothetical protein; this gene contains a frame shift which may be the result of sequencing error; identified by glimmer
6968414	outer membrane usher protein LpfC; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF00577
6967811	outer membrane usher protein SfmD; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF00577
6970547	hypothetical protein; this gene contains a premature stop which may be the result of sequencing error; identified by glimmer
6970909	glycosyl transferase, group 2 family protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00535
6969668	conserved hypothetical protein; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF06117
6968586	Aec79; this region contains one or more premature stops and/or frameshifts
6969211	Aec79; this region contains one or more premature stops and/or frameshifts
6971690	purine ribonucleoside efflux pump NepI; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF07690
6968384	inorganic anion transporter sulfate permease (SulP) family; this gene contains a frame shift which may be the result of sequencing error
6970429	inner membrane protein YicO; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00860
6969167	conserved hypothetical protein; this gene contains a premature stop which may be the result of sequencing error
6968972	hypothetical protein; this gene contains a premature stop which may be the result of sequencing error; identified by glimmer
6970803	conserved hypothetical protein; this gene contains a premature stop which may be the result of sequencing error
6966805	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6970275	conserved domain protein; this gene contains a premature stop which may be the result of sequencing error
6968307	hypothetical protein; this gene contains a frame shift which may be the result of sequencing error; identified by glimmer
6968735	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6968468	long polar fimbrial operon protein LpfB; this gene contains a frame shift which may be the result of sequencing error
6969102	gram-negative pili assembly chaperone, N- domain; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00345
6969267	hypothetical protein; this gene contains a premature stop which may be the result of sequencing error; identified by glimmer
6968530	conserved hypothetical protein; this gene contains a premature stop which may be the result of sequencing error
6968981	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6969882	formate dehydrogenase-O, major subunit, selenocysteine-containing; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM TIGR01553
6969080	formate dehydrogenase, alpha subunit; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF04879; match to protein family HMM TIGR01409
6967479	L-rhamnose-proton symporter; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF06379
6966882	L-rhamnose-proton symporter (L-rhamnose-H(+) transport protein); this gene contains a premature stop which may be the result of sequencing error
6966602	dsORF-f3; this gene contains a frame shift which may be the result of sequencing error
6970276	heat shock protein C; this region contains one or more premature stops and/or frameshifts
6969140	PTS system, mannose/fructose/sorbose family, IIB component; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF03830; match to protein family HMM TIGR00854
6967879	DNA N-4 cytosine methyltransferase M.NgoMXV; this gene contains a premature stop which may be the result of sequencing error
6968681	methyltransferase; this gene contains a premature stop which may be the result of sequencing error
6966579	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6967977	hypothetical protein; this gene contains a frame shift which may be the result of sequencing error; identified by glimmer
6966877	formate dehydrogenase H, alpha subunit, selenocysteine-containing; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM TIGR01591
6967510	formate dehydrogenase H (Formate-hydrogen-lyase-linked,selenocysteine-containing polypeptide) (Formate dehydrogenase-H alphasubunit) (FDH-H); this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF04879
6969719	hypothetical protein; this gene contains a premature stop which may be the result of sequencing error; identified by glimmer
6971950	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6970674	acetyltransferase, GNAT family; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00583
6970426	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6968916	sugar ABC transporter ATP-binding protein; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF00005
6968374	conserved hypothetical protein; this gene contains a premature stop which may be the result of sequencing error
6968932	ribose import ATP-binding protein RbsA 2; this gene contains a premature stop which may be the result of sequencing error
6971731	conserved hypothetical protein; this region contains one or more premature stops and/or frameshifts
6971221	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6971661	ISSod7; this gene contains a frame shift which may be the result of sequencing error
6967918	transcriptional regulator, LysR family; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF03466
6967649	RNA 2'-phosphotransferase; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF01885
6969483	phosphotransferase KptA/Tpt1; this gene contains a frame shift which may be the result of sequencing error
6972203	invasin; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF02369
6968957	invasin; this gene contains a frame shift which may be the result of sequencing error
6967553	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF04754; match to protein family HMM TIGR01784
6968142	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF03235
6969350	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF07510
6970032	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF03235
6969405	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF03235; match to protein family HMM PF07510
6968867	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
6968890	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error