-- dump date 20240506_051310 -- class Genbank::Contig -- table contig_comment -- id comment NZ_AP024085.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to AP024085.1.REFSEQ INFORMATION: The reference sequence is identical to AP024085.1. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to AP024085.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to AP024085.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to AP024085.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/REFSEQ INFORMATION: The reference sequence is identical to AP024085.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to AP024085.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 2.0; Pilon v. 1.23REFSEQ INFORMATION: The reference sequence is identical to AP024085.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 2.0; Pilon v. 1.23 Genome Coverage :: 4018xREFSEQ INFORMATION: The reference sequence is identical to AP024085.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 2.0; Pilon v. 1.23 Genome Coverage :: 4018x Sequencing Technology :: PacBio Sequel; Illumina HiSeq2500REFSEQ INFORMATION: The reference sequence is identical to AP024085.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 2.0; Pilon v. 1.23 Genome Coverage :: 4018x Sequencing Technology :: PacBio Sequel; Illumina HiSeq2500 ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to AP024085.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 2.0; Pilon v. 1.23 Genome Coverage :: 4018x Sequencing Technology :: PacBio Sequel; Illumina HiSeq2500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to AP024085.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 2.0; Pilon v. 1.23 Genome Coverage :: 4018x Sequencing Technology :: PacBio Sequel; Illumina HiSeq2500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to AP024085.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 2.0; Pilon v. 1.23 Genome Coverage :: 4018x Sequencing Technology :: PacBio Sequel; Illumina HiSeq2500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 11/05/2023 13:36:46REFSEQ INFORMATION: The reference sequence is identical to AP024085.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 2.0; Pilon v. 1.23 Genome Coverage :: 4018x Sequencing Technology :: PacBio Sequel; Illumina HiSeq2500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 11/05/2023 13:36:46 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to AP024085.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 2.0; Pilon v. 1.23 Genome Coverage :: 4018x Sequencing Technology :: PacBio Sequel; Illumina HiSeq2500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 11/05/2023 13:36:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to AP024085.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 2.0; Pilon v. 1.23 Genome Coverage :: 4018x Sequencing Technology :: PacBio Sequel; Illumina HiSeq2500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 11/05/2023 13:36:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to AP024085.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 2.0; Pilon v. 1.23 Genome Coverage :: 4018x Sequencing Technology :: PacBio Sequel; Illumina HiSeq2500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 11/05/2023 13:36:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to AP024085.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 2.0; Pilon v. 1.23 Genome Coverage :: 4018x Sequencing Technology :: PacBio Sequel; Illumina HiSeq2500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 11/05/2023 13:36:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to AP024085.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 2.0; Pilon v. 1.23 Genome Coverage :: 4018x Sequencing Technology :: PacBio Sequel; Illumina HiSeq2500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 11/05/2023 13:36:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to AP024085.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 2.0; Pilon v. 1.23 Genome Coverage :: 4018x Sequencing Technology :: PacBio Sequel; Illumina HiSeq2500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 11/05/2023 13:36:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,053REFSEQ INFORMATION: The reference sequence is identical to AP024085.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 2.0; Pilon v. 1.23 Genome Coverage :: 4018x Sequencing Technology :: PacBio Sequel; Illumina HiSeq2500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 11/05/2023 13:36:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,053 CDSs (total) :: 2,956REFSEQ INFORMATION: The reference sequence is identical to AP024085.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 2.0; Pilon v. 1.23 Genome Coverage :: 4018x Sequencing Technology :: PacBio Sequel; Illumina HiSeq2500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 11/05/2023 13:36:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,053 CDSs (total) :: 2,956 Genes (coding) :: 2,912REFSEQ INFORMATION: The reference sequence is identical to AP024085.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 2.0; Pilon v. 1.23 Genome Coverage :: 4018x Sequencing Technology :: PacBio Sequel; Illumina HiSeq2500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 11/05/2023 13:36:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,053 CDSs (total) :: 2,956 Genes (coding) :: 2,912 CDSs (with protein) :: 2,912REFSEQ INFORMATION: The reference sequence is identical to AP024085.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 2.0; Pilon v. 1.23 Genome Coverage :: 4018x Sequencing Technology :: PacBio Sequel; Illumina HiSeq2500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 11/05/2023 13:36:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,053 CDSs (total) :: 2,956 Genes (coding) :: 2,912 CDSs (with protein) :: 2,912 Genes (RNA) :: 97REFSEQ INFORMATION: The reference sequence is identical to AP024085.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 2.0; Pilon v. 1.23 Genome Coverage :: 4018x Sequencing Technology :: PacBio Sequel; Illumina HiSeq2500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 11/05/2023 13:36:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,053 CDSs (total) :: 2,956 Genes (coding) :: 2,912 CDSs (with protein) :: 2,912 Genes (RNA) :: 97 rRNAs :: 9, 9, 9 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to AP024085.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 2.0; Pilon v. 1.23 Genome Coverage :: 4018x Sequencing Technology :: PacBio Sequel; Illumina HiSeq2500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 11/05/2023 13:36:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,053 CDSs (total) :: 2,956 Genes (coding) :: 2,912 CDSs (with protein) :: 2,912 Genes (RNA) :: 97 rRNAs :: 9, 9, 9 (5S, 16S, 23S) complete rRNAs :: 9, 9, 9 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to AP024085.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 2.0; Pilon v. 1.23 Genome Coverage :: 4018x Sequencing Technology :: PacBio Sequel; Illumina HiSeq2500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 11/05/2023 13:36:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,053 CDSs (total) :: 2,956 Genes (coding) :: 2,912 CDSs (with protein) :: 2,912 Genes (RNA) :: 97 rRNAs :: 9, 9, 9 (5S, 16S, 23S) complete rRNAs :: 9, 9, 9 (5S, 16S, 23S) tRNAs :: 66REFSEQ INFORMATION: The reference sequence is identical to AP024085.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 2.0; Pilon v. 1.23 Genome Coverage :: 4018x Sequencing Technology :: PacBio Sequel; Illumina HiSeq2500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 11/05/2023 13:36:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,053 CDSs (total) :: 2,956 Genes (coding) :: 2,912 CDSs (with protein) :: 2,912 Genes (RNA) :: 97 rRNAs :: 9, 9, 9 (5S, 16S, 23S) complete rRNAs :: 9, 9, 9 (5S, 16S, 23S) tRNAs :: 66 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to AP024085.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 2.0; Pilon v. 1.23 Genome Coverage :: 4018x Sequencing Technology :: PacBio Sequel; Illumina HiSeq2500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 11/05/2023 13:36:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,053 CDSs (total) :: 2,956 Genes (coding) :: 2,912 CDSs (with protein) :: 2,912 Genes (RNA) :: 97 rRNAs :: 9, 9, 9 (5S, 16S, 23S) complete rRNAs :: 9, 9, 9 (5S, 16S, 23S) tRNAs :: 66 ncRNAs :: 4 Pseudo Genes (total) :: 44REFSEQ INFORMATION: The reference sequence is identical to AP024085.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 2.0; Pilon v. 1.23 Genome Coverage :: 4018x Sequencing Technology :: PacBio Sequel; Illumina HiSeq2500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 11/05/2023 13:36:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,053 CDSs (total) :: 2,956 Genes (coding) :: 2,912 CDSs (with protein) :: 2,912 Genes (RNA) :: 97 rRNAs :: 9, 9, 9 (5S, 16S, 23S) complete rRNAs :: 9, 9, 9 (5S, 16S, 23S) tRNAs :: 66 ncRNAs :: 4 Pseudo Genes (total) :: 44 CDSs (without protein) :: 44REFSEQ INFORMATION: The reference sequence is identical to AP024085.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 2.0; Pilon v. 1.23 Genome Coverage :: 4018x Sequencing Technology :: PacBio Sequel; Illumina HiSeq2500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 11/05/2023 13:36:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,053 CDSs (total) :: 2,956 Genes (coding) :: 2,912 CDSs (with protein) :: 2,912 Genes (RNA) :: 97 rRNAs :: 9, 9, 9 (5S, 16S, 23S) complete rRNAs :: 9, 9, 9 (5S, 16S, 23S) tRNAs :: 66 ncRNAs :: 4 Pseudo Genes (total) :: 44 CDSs (without protein) :: 44 Pseudo Genes (ambiguous residues) :: 0 of 44REFSEQ INFORMATION: The reference sequence is identical to AP024085.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 2.0; Pilon v. 1.23 Genome Coverage :: 4018x Sequencing Technology :: PacBio Sequel; Illumina HiSeq2500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 11/05/2023 13:36:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,053 CDSs (total) :: 2,956 Genes (coding) :: 2,912 CDSs (with protein) :: 2,912 Genes (RNA) :: 97 rRNAs :: 9, 9, 9 (5S, 16S, 23S) complete rRNAs :: 9, 9, 9 (5S, 16S, 23S) tRNAs :: 66 ncRNAs :: 4 Pseudo Genes (total) :: 44 CDSs (without protein) :: 44 Pseudo Genes (ambiguous residues) :: 0 of 44 Pseudo Genes (frameshifted) :: 7 of 44REFSEQ INFORMATION: The reference sequence is identical to AP024085.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 2.0; Pilon v. 1.23 Genome Coverage :: 4018x Sequencing Technology :: PacBio Sequel; Illumina HiSeq2500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 11/05/2023 13:36:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,053 CDSs (total) :: 2,956 Genes (coding) :: 2,912 CDSs (with protein) :: 2,912 Genes (RNA) :: 97 rRNAs :: 9, 9, 9 (5S, 16S, 23S) complete rRNAs :: 9, 9, 9 (5S, 16S, 23S) tRNAs :: 66 ncRNAs :: 4 Pseudo Genes (total) :: 44 CDSs (without protein) :: 44 Pseudo Genes (ambiguous residues) :: 0 of 44 Pseudo Genes (frameshifted) :: 7 of 44 Pseudo Genes (incomplete) :: 29 of 44REFSEQ INFORMATION: The reference sequence is identical to AP024085.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 2.0; Pilon v. 1.23 Genome Coverage :: 4018x Sequencing Technology :: PacBio Sequel; Illumina HiSeq2500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 11/05/2023 13:36:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,053 CDSs (total) :: 2,956 Genes (coding) :: 2,912 CDSs (with protein) :: 2,912 Genes (RNA) :: 97 rRNAs :: 9, 9, 9 (5S, 16S, 23S) complete rRNAs :: 9, 9, 9 (5S, 16S, 23S) tRNAs :: 66 ncRNAs :: 4 Pseudo Genes (total) :: 44 CDSs (without protein) :: 44 Pseudo Genes (ambiguous residues) :: 0 of 44 Pseudo Genes (frameshifted) :: 7 of 44 Pseudo Genes (incomplete) :: 29 of 44 Pseudo Genes (internal stop) :: 14 of 44REFSEQ INFORMATION: The reference sequence is identical to AP024085.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 2.0; Pilon v. 1.23 Genome Coverage :: 4018x Sequencing Technology :: PacBio Sequel; Illumina HiSeq2500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 11/05/2023 13:36:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,053 CDSs (total) :: 2,956 Genes (coding) :: 2,912 CDSs (with protein) :: 2,912 Genes (RNA) :: 97 rRNAs :: 9, 9, 9 (5S, 16S, 23S) complete rRNAs :: 9, 9, 9 (5S, 16S, 23S) tRNAs :: 66 ncRNAs :: 4 Pseudo Genes (total) :: 44 CDSs (without protein) :: 44 Pseudo Genes (ambiguous residues) :: 0 of 44 Pseudo Genes (frameshifted) :: 7 of 44 Pseudo Genes (incomplete) :: 29 of 44 Pseudo Genes (internal stop) :: 14 of 44 Pseudo Genes (multiple problems) :: 5 of 44REFSEQ INFORMATION: The reference sequence is identical to AP024085.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 2.0; Pilon v. 1.23 Genome Coverage :: 4018x Sequencing Technology :: PacBio Sequel; Illumina HiSeq2500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 11/05/2023 13:36:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,053 CDSs (total) :: 2,956 Genes (coding) :: 2,912 CDSs (with protein) :: 2,912 Genes (RNA) :: 97 rRNAs :: 9, 9, 9 (5S, 16S, 23S) complete rRNAs :: 9, 9, 9 (5S, 16S, 23S) tRNAs :: 66 ncRNAs :: 4 Pseudo Genes (total) :: 44 CDSs (without protein) :: 44 Pseudo Genes (ambiguous residues) :: 0 of 44 Pseudo Genes (frameshifted) :: 7 of 44 Pseudo Genes (incomplete) :: 29 of 44 Pseudo Genes (internal stop) :: 14 of 44 Pseudo Genes (multiple problems) :: 5 of 44 CRISPR Arrays :: 1REFSEQ INFORMATION: The reference sequence is identical to AP024085.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 2.0; Pilon v. 1.23 Genome Coverage :: 4018x Sequencing Technology :: PacBio Sequel; Illumina HiSeq2500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 11/05/2023 13:36:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,053 CDSs (total) :: 2,956 Genes (coding) :: 2,912 CDSs (with protein) :: 2,912 Genes (RNA) :: 97 rRNAs :: 9, 9, 9 (5S, 16S, 23S) complete rRNAs :: 9, 9, 9 (5S, 16S, 23S) tRNAs :: 66 ncRNAs :: 4 Pseudo Genes (total) :: 44 CDSs (without protein) :: 44 Pseudo Genes (ambiguous residues) :: 0 of 44 Pseudo Genes (frameshifted) :: 7 of 44 Pseudo Genes (incomplete) :: 29 of 44 Pseudo Genes (internal stop) :: 14 of 44 Pseudo Genes (multiple problems) :: 5 of 44 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to AP024085.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 2.0; Pilon v. 1.23 Genome Coverage :: 4018x Sequencing Technology :: PacBio Sequel; Illumina HiSeq2500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 11/05/2023 13:36:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,053 CDSs (total) :: 2,956 Genes (coding) :: 2,912 CDSs (with protein) :: 2,912 Genes (RNA) :: 97 rRNAs :: 9, 9, 9 (5S, 16S, 23S) complete rRNAs :: 9, 9, 9 (5S, 16S, 23S) tRNAs :: 66 ncRNAs :: 4 Pseudo Genes (total) :: 44 CDSs (without protein) :: 44 Pseudo Genes (ambiguous residues) :: 0 of 44 Pseudo Genes (frameshifted) :: 7 of 44 Pseudo Genes (incomplete) :: 29 of 44 Pseudo Genes (internal stop) :: 14 of 44 Pseudo Genes (multiple problems) :: 5 of 44 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END## COMPLETENESS: full length.