-- dump date 20240506_005704 -- class Genbank::Contig -- table contig_comment -- id comment NC_017095.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP003260.1.REFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180REFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu)REFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078REFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu)REFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANLREFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaeaREFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078REFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789REFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: ItalyREFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, SedimentREFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1REFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078REFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: AnaerobeREFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGSREFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release)REFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi08397REFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi08397 Type Strain :: NoREFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi08397 Type Strain :: No Funding Program :: DOE-CSP 2010REFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi08397 Type Strain :: No Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMPREFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi08397 Type Strain :: No Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: hot mud of spaREFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi08397 Type Strain :: No Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: hot mud of spa Temperature Range :: ThermophileREFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi08397 Type Strain :: No Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: hot mud of spa Temperature Range :: Thermophile Temperature Optimum :: 65CREFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi08397 Type Strain :: No Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: hot mud of spa Temperature Range :: Thermophile Temperature Optimum :: 65C ##MIGS-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi08397 Type Strain :: No Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: hot mud of spa Temperature Range :: Thermophile Temperature Optimum :: 65C ##MIGS-Data-END## ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi08397 Type Strain :: No Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: hot mud of spa Temperature Range :: Thermophile Temperature Optimum :: 65C ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi08397 Type Strain :: No Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: hot mud of spa Temperature Range :: Thermophile Temperature Optimum :: 65C ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi08397 Type Strain :: No Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: hot mud of spa Temperature Range :: Thermophile Temperature Optimum :: 65C ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3REFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi08397 Type Strain :: No Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: hot mud of spa Temperature Range :: Thermophile Temperature Optimum :: 65C ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30xREFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi08397 Type Strain :: No Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: hot mud of spa Temperature Range :: Thermophile Temperature Optimum :: 65C ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/IlluminaREFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi08397 Type Strain :: No Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: hot mud of spa Temperature Range :: Thermophile Temperature Optimum :: 65C ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi08397 Type Strain :: No Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: hot mud of spa Temperature Range :: Thermophile Temperature Optimum :: 65C ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi08397 Type Strain :: No Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: hot mud of spa Temperature Range :: Thermophile Temperature Optimum :: 65C ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi08397 Type Strain :: No Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: hot mud of spa Temperature Range :: Thermophile Temperature Optimum :: 65C ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:44:07REFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi08397 Type Strain :: No Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: hot mud of spa Temperature Range :: Thermophile Temperature Optimum :: 65C ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:44:07 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi08397 Type Strain :: No Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: hot mud of spa Temperature Range :: Thermophile Temperature Optimum :: 65C ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:44:07 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi08397 Type Strain :: No Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: hot mud of spa Temperature Range :: Thermophile Temperature Optimum :: 65C ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:44:07 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi08397 Type Strain :: No Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: hot mud of spa Temperature Range :: Thermophile Temperature Optimum :: 65C ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:44:07 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi08397 Type Strain :: No Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: hot mud of spa Temperature Range :: Thermophile Temperature Optimum :: 65C ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:44:07 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5REFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi08397 Type Strain :: No Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: hot mud of spa Temperature Range :: Thermophile Temperature Optimum :: 65C ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:44:07 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi08397 Type Strain :: No Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: hot mud of spa Temperature Range :: Thermophile Temperature Optimum :: 65C ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:44:07 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,050REFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi08397 Type Strain :: No Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: hot mud of spa Temperature Range :: Thermophile Temperature Optimum :: 65C ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:44:07 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,050 CDSs (total) :: 1,993REFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi08397 Type Strain :: No Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: hot mud of spa Temperature Range :: Thermophile Temperature Optimum :: 65C ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:44:07 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,050 CDSs (total) :: 1,993 Genes (coding) :: 1,976REFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi08397 Type Strain :: No Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: hot mud of spa Temperature Range :: Thermophile Temperature Optimum :: 65C ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:44:07 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,050 CDSs (total) :: 1,993 Genes (coding) :: 1,976 CDSs (with protein) :: 1,976REFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi08397 Type Strain :: No Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: hot mud of spa Temperature Range :: Thermophile Temperature Optimum :: 65C ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:44:07 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,050 CDSs (total) :: 1,993 Genes (coding) :: 1,976 CDSs (with protein) :: 1,976 Genes (RNA) :: 57REFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi08397 Type Strain :: No Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: hot mud of spa Temperature Range :: Thermophile Temperature Optimum :: 65C ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:44:07 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,050 CDSs (total) :: 1,993 Genes (coding) :: 1,976 CDSs (with protein) :: 1,976 Genes (RNA) :: 57 rRNAs :: 3, 1, 2 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi08397 Type Strain :: No Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: hot mud of spa Temperature Range :: Thermophile Temperature Optimum :: 65C ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:44:07 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,050 CDSs (total) :: 1,993 Genes (coding) :: 1,976 CDSs (with protein) :: 1,976 Genes (RNA) :: 57 rRNAs :: 3, 1, 2 (5S, 16S, 23S) complete rRNAs :: 3, 1, 2 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi08397 Type Strain :: No Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: hot mud of spa Temperature Range :: Thermophile Temperature Optimum :: 65C ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:44:07 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,050 CDSs (total) :: 1,993 Genes (coding) :: 1,976 CDSs (with protein) :: 1,976 Genes (RNA) :: 57 rRNAs :: 3, 1, 2 (5S, 16S, 23S) complete rRNAs :: 3, 1, 2 (5S, 16S, 23S) tRNAs :: 48REFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi08397 Type Strain :: No Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: hot mud of spa Temperature Range :: Thermophile Temperature Optimum :: 65C ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:44:07 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,050 CDSs (total) :: 1,993 Genes (coding) :: 1,976 CDSs (with protein) :: 1,976 Genes (RNA) :: 57 rRNAs :: 3, 1, 2 (5S, 16S, 23S) complete rRNAs :: 3, 1, 2 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 3REFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi08397 Type Strain :: No Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: hot mud of spa Temperature Range :: Thermophile Temperature Optimum :: 65C ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:44:07 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,050 CDSs (total) :: 1,993 Genes (coding) :: 1,976 CDSs (with protein) :: 1,976 Genes (RNA) :: 57 rRNAs :: 3, 1, 2 (5S, 16S, 23S) complete rRNAs :: 3, 1, 2 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 3 Pseudo Genes (total) :: 17REFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi08397 Type Strain :: No Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: hot mud of spa Temperature Range :: Thermophile Temperature Optimum :: 65C ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:44:07 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,050 CDSs (total) :: 1,993 Genes (coding) :: 1,976 CDSs (with protein) :: 1,976 Genes (RNA) :: 57 rRNAs :: 3, 1, 2 (5S, 16S, 23S) complete rRNAs :: 3, 1, 2 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 3 Pseudo Genes (total) :: 17 CDSs (without protein) :: 17REFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi08397 Type Strain :: No Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: hot mud of spa Temperature Range :: Thermophile Temperature Optimum :: 65C ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:44:07 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,050 CDSs (total) :: 1,993 Genes (coding) :: 1,976 CDSs (with protein) :: 1,976 Genes (RNA) :: 57 rRNAs :: 3, 1, 2 (5S, 16S, 23S) complete rRNAs :: 3, 1, 2 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 3 Pseudo Genes (total) :: 17 CDSs (without protein) :: 17 Pseudo Genes (ambiguous residues) :: 0 of 17REFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi08397 Type Strain :: No Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: hot mud of spa Temperature Range :: Thermophile Temperature Optimum :: 65C ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:44:07 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,050 CDSs (total) :: 1,993 Genes (coding) :: 1,976 CDSs (with protein) :: 1,976 Genes (RNA) :: 57 rRNAs :: 3, 1, 2 (5S, 16S, 23S) complete rRNAs :: 3, 1, 2 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 3 Pseudo Genes (total) :: 17 CDSs (without protein) :: 17 Pseudo Genes (ambiguous residues) :: 0 of 17 Pseudo Genes (frameshifted) :: 8 of 17REFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi08397 Type Strain :: No Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: hot mud of spa Temperature Range :: Thermophile Temperature Optimum :: 65C ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:44:07 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,050 CDSs (total) :: 1,993 Genes (coding) :: 1,976 CDSs (with protein) :: 1,976 Genes (RNA) :: 57 rRNAs :: 3, 1, 2 (5S, 16S, 23S) complete rRNAs :: 3, 1, 2 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 3 Pseudo Genes (total) :: 17 CDSs (without protein) :: 17 Pseudo Genes (ambiguous residues) :: 0 of 17 Pseudo Genes (frameshifted) :: 8 of 17 Pseudo Genes (incomplete) :: 10 of 17REFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi08397 Type Strain :: No Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: hot mud of spa Temperature Range :: Thermophile Temperature Optimum :: 65C ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:44:07 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,050 CDSs (total) :: 1,993 Genes (coding) :: 1,976 CDSs (with protein) :: 1,976 Genes (RNA) :: 57 rRNAs :: 3, 1, 2 (5S, 16S, 23S) complete rRNAs :: 3, 1, 2 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 3 Pseudo Genes (total) :: 17 CDSs (without protein) :: 17 Pseudo Genes (ambiguous residues) :: 0 of 17 Pseudo Genes (frameshifted) :: 8 of 17 Pseudo Genes (incomplete) :: 10 of 17 Pseudo Genes (internal stop) :: 0 of 17REFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi08397 Type Strain :: No Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: hot mud of spa Temperature Range :: Thermophile Temperature Optimum :: 65C ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:44:07 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,050 CDSs (total) :: 1,993 Genes (coding) :: 1,976 CDSs (with protein) :: 1,976 Genes (RNA) :: 57 rRNAs :: 3, 1, 2 (5S, 16S, 23S) complete rRNAs :: 3, 1, 2 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 3 Pseudo Genes (total) :: 17 CDSs (without protein) :: 17 Pseudo Genes (ambiguous residues) :: 0 of 17 Pseudo Genes (frameshifted) :: 8 of 17 Pseudo Genes (incomplete) :: 10 of 17 Pseudo Genes (internal stop) :: 0 of 17 Pseudo Genes (multiple problems) :: 1 of 17REFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi08397 Type Strain :: No Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: hot mud of spa Temperature Range :: Thermophile Temperature Optimum :: 65C ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:44:07 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,050 CDSs (total) :: 1,993 Genes (coding) :: 1,976 CDSs (with protein) :: 1,976 Genes (RNA) :: 57 rRNAs :: 3, 1, 2 (5S, 16S, 23S) complete rRNAs :: 3, 1, 2 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 3 Pseudo Genes (total) :: 17 CDSs (without protein) :: 17 Pseudo Genes (ambiguous residues) :: 0 of 17 Pseudo Genes (frameshifted) :: 8 of 17 Pseudo Genes (incomplete) :: 10 of 17 Pseudo Genes (internal stop) :: 0 of 17 Pseudo Genes (multiple problems) :: 1 of 17 CRISPR Arrays :: 4REFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi08397 Type Strain :: No Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: hot mud of spa Temperature Range :: Thermophile Temperature Optimum :: 65C ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:44:07 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,050 CDSs (total) :: 1,993 Genes (coding) :: 1,976 CDSs (with protein) :: 1,976 Genes (RNA) :: 57 rRNAs :: 3, 1, 2 (5S, 16S, 23S) complete rRNAs :: 3, 1, 2 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 3 Pseudo Genes (total) :: 17 CDSs (without protein) :: 17 Pseudo Genes (ambiguous residues) :: 0 of 17 Pseudo Genes (frameshifted) :: 8 of 17 Pseudo Genes (incomplete) :: 10 of 17 Pseudo Genes (internal stop) :: 0 of 17 Pseudo Genes (multiple problems) :: 1 of 17 CRISPR Arrays :: 4 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP003260.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4092180 Source DNA available from Kenneth Noll (noll@uconn.edu) Organism available from DSMZ: DSM 9078 Contacts: Kenneth Noll (noll@uconn.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Fervidobacterium pennivorans DSM 9078 collection_date :: Missing lat_lon :: 45.362 11.789 depth :: Missing alt_elev :: Missing country :: Italy environment :: Hot spring, Mud, Sediment num_replicons :: 1 ref_biomaterial :: DSM 9078 biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi08397 Type Strain :: No Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: hot mud of spa Temperature Range :: Thermophile Temperature Optimum :: 65C ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:44:07 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,050 CDSs (total) :: 1,993 Genes (coding) :: 1,976 CDSs (with protein) :: 1,976 Genes (RNA) :: 57 rRNAs :: 3, 1, 2 (5S, 16S, 23S) complete rRNAs :: 3, 1, 2 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 3 Pseudo Genes (total) :: 17 CDSs (without protein) :: 17 Pseudo Genes (ambiguous residues) :: 0 of 17 Pseudo Genes (frameshifted) :: 8 of 17 Pseudo Genes (incomplete) :: 10 of 17 Pseudo Genes (internal stop) :: 0 of 17 Pseudo Genes (multiple problems) :: 1 of 17 CRISPR Arrays :: 4 ##Genome-Annotation-Data-END## COMPLETENESS: full length.