-- dump date 20140619_093814 -- class Genbank::CDS -- table cds_note -- id note YP_004842405.1 Involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs (by similarity) YP_004842449.1 This family consists of several prokaryotic TelA like proteins. TelA and KlA are associated with tellurite resistance and plasmid fertility inhibition YP_004842458.1 Putative tellurium resistance protein YP_004842459.1 Some similarities with protein of unknown function. Putative pseudogene YP_004842514.1 TC 2.A.1.10.Z YP_004842530.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma subunit is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex (by similarity) YP_004842531.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha subunit is a regulatory subunit (by similarity) YP_004842532.1 This protein seems to be part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) into CF(1) or is implicated in proton conduction (by similarity) YP_004842534.1 This is one of the three subunit of the nonenzymatic component (CF(0) subunit) of the ATPase complex (by similarity) YP_004842535.1 Key component of the proton channel; it may play a direct role in the translocation of protons across the membrane (by similarity) YP_004842558.1 Weakly similar to to protein of unknown function of Flavobacterium psychrophilum YP_004842576.1 Highly similar to gliding motility protein GldE of Flavobacterium johnsoniae YP_004842577.1 Highly similar to gliding motility protein GldD of Flavobacterium johnsoniae, a probable cytoplasmic membrane protein YP_004842626.1 Efflux transporter, RND family, RND subunit YP_004842736.1 Glyoxylate bypass; first step (by similarity) YP_004842737.1 Glyoxylate bypass; second step (by similarity) YP_004842750.1 Outer Membrane Receptor (OMR) Family protein.TC 1.B. 14.Y.Z YP_004842764.1 Biotin metabolism YP_004842790.1 Metabolic intermediate biosynthesis; mevalonate biosynthesis; R-mevalonate from acetyl-CoA: step 3/3 YP_004842853.1 Efflux transporter, RND family, RND subunit YP_004842872.1 Similar to Streptopain precursor an important streptococcal virulence factor. YP_004842881.1 Amine and polyamine biosynthesis; spermidine biosynthesis; spermidine from putrescine: step 1/1 YP_004842885.1 Decarboxylation of S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine YP_004842889.1 GH13 - Hydrolyzes various disaccharides such as sucrose, maltose, and isomaltose with different efficiencies. Also hydrolyzes longer maltodextrins from maltotriose up to maltohexaose, but not maltoheptaose, palatinose, isomaltotriose, or isomaltotetraose (by similarity) YP_004842897.1 TC 2.A.1.Y.Z. YP_004842946.1 GH37 YP_004843036.1 GH9 YP_004843058.1 Cell wall formation. Peptidoglycan biosynthesis; last step (by similarity) YP_004843069.1 Efflux transporter, ABC family, OMF subunit YP_004843070.1 Efflux transporter, ABC family, MFP subunit YP_004843071.1 Efflux transporter, ABC family, IM-ABC subunit YP_004843095.1 ABC transporter, ATP-binding protein (ABC), CLS-family, polysaccharide/polyol phosphate export, TC 3.A.1.Y. Z YP_004843096.1 Lipopolysaccharide (LPS) biosynthesis; O-antigen biosynthesis YP_004843097.1 Lipopolysaccharide (LPS) biosynthesis; O-antigen biosynthesis YP_004843127.1 Sigma 54 modulation protein/ribosomal protein S30EA YP_004843197.1 Efflux transporter, RND family, MFP subunit YP_004843198.1 Efflux transporter, RND family, RND subunit YP_004843239.1 Some similarities with predicted proline hydroxylase COG3751 YP_004843254.1 [Mn] YP_004843255.1 [Mn] YP_004843256.1 Similar to the CtxA1 enterotoxin of Vibrio cholera YP_004843310.1 Amino-acid biosynthesis; L-methionine biosynthesis; L-homocysteine from O-succinyl-L-homoserine: step 1/1 (by similarity) YP_004843336.1 GH3 YP_004843423.1 Catalyzes the specific phosphorylation of 1,6-anhydro-N-acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling (By similarity) YP_004843456.1 START OK according other Flavobacterium species - Annotation automatically inferred by bidirectionnal best hit with 1836 from FP YP_004843479.1 GH3 YP_004843562.1 Outer Membrane Receptor (OMR) Family protein YP_004843608.1 Metabolic intermediate biosynthesis; mevalonate biosynthesis; R-mevalonate from acetyl-CoA: step 1/3 YP_004843635.1 GH16 YP_004843637.1 GH30 YP_004843638.1 GH30 YP_004843639.1 GH3 YP_004843702.1 Inactivates antibiotics by acetylation, thus providing resistance to these antibiotics YP_004843723.1 Glycan biosynthesis; glycogen biosynthesis YP_004843724.1 Glycan biosynthesis; glycogen biosynthesis YP_004843725.1 Glycan biosynthesis; glycogen biosynthesis YP_004843736.1 Annotation automatically inferred by bidirectionnal best hit with 341 from FP YP_004843746.1 GH31 YP_004843783.1 The Major Facilitator Superfamily (MFS) - TC 2.A.1. 7.z YP_004843822.1 Weakly similar to to protein of unknown function of Flavobacterium johnsoniae YP_004843843.1 Metabolic intermediate biosynthesis; mevalonate biosynthesis; R-mevalonate from acetyl-CoA: step 2/3 YP_004843845.1 Ring cleavage of cyclic ester dienelactone to produce maleylacetate. Aromatic compound metabolism; 3-chlorocatechol degradation. YP_004843848.1 Putative methylase YP_004843878.1 Catalyzes the reversible epimerization at C-2 of UDP-N-acetylglucosamine (UDP-GlcNAc) and thereby provides bacteria with UDP-N-acetylmannosamine (UDP-ManNAc), the activated donor of ManNAc residues (by similarity) YP_004843881.1 Bacterial sugar transferase YP_004843955.1 Through the carboxylation of phosphoenolpyruvate (PEP) it forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle YP_004843961.1 N-terminal region similar to FAD/FMN-containing dehydrogenases COG0277 and C-terminal region similar to Fe-S oxidoreductase COG0247 YP_004843982.1 Efflux transporter, RND family, MFP subunit YP_004843983.1 Efflux transporter, RND family, RND subunit YP_004844016.1 Similar to protein of unknown function of Flavobacterium johnsoniae YP_004844017.1 Similar to protein of unknown function of Flavobacterium johnsoniae YP_004844018.1 Similar to protein of unknown function of Flavobacterium johnsoniae YP_004844019.1 Similar to protein of unknown function of Flavobacterium johnsoniae YP_004844020.1 Similar to protein of unknown function of Flavobacterium johnsoniae YP_004844023.1 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides (By similarity). YP_004844060.1 Similar to Fjo19 protein of unknown function of Flavobacterium johnsoniae YP_004844072.1 Amino-acid biosynthesis; L-threonine biosynthesis; L-threonine from L-aspartate: step 5/5 YP_004844086.1 Catalyzes the synthesis of propionyl-CoA from propionate and CoA YP_004844130.1 Metabolic intermediate biosynthesis; 5-phospho-alpha-D-ribose 1-diphosphate biosynthesis; 5-phospho-alpha-D-ribose 1-diphosphate from D-ribose 5-phosphate (route I): step 1/1. YP_004844199.1 Annotation automatically inferred by bidirectionnal best hit with 240 from FP YP_004844239.1 Inactivates antibiotics by acetylation, thus providing resistance to these antibiotics YP_004844249.1 Amino-acid biosynthesis; L-glutamate biosynthesis via GLT pathway; L-glutamate from 2-oxoglutarate and L-glutamine (NADPH route): step 1/1. YP_004844260.1 Membrane Fusion Protein (MFP) Family. Probable lipoprotein. TC 8.A.1.Y.Z YP_004844261.1 Outer Membrane Factor (OMF) Family. TC 1.B.17.Y.Z YP_004844331.1 Amino-acid biosynthesis; L-arginine biosynthesis; L-arginine from L-ornithine and carbamoyl phosphate: step 2/3 YP_004844332.1 Amino-acid biosynthesis; L-arginine biosynthesis; N(2)-acetyl-L-ornithine from L-glutamate: step 3/4 YP_004844334.1 Amino-acid biosynthesis; L-proline biosynthesis; L-glutamate 5-semialdehyde from L-glutamate: step 2/2 YP_004844335.1 Amino-acid biosynthesis; L-proline biosynthesis; L-glutamate 5-semialdehyde from L-glutamate: step 1/2 YP_004844336.1 Amino-acid biosynthesis; L-arginine biosynthesis; L-arginine from L-ornithine and carbamoyl phosphate: step 1/3 YP_004844337.1 Amino-acid biosynthesis; L-arginine biosynthesis; N(2)-acetyl-L-ornithine from L-glutamate: step 2/4 YP_004844338.1 Amino-acid biosynthesis; L-arginine biosynthesis; L-ornithine from N(2)-acetyl-L-ornithine (linear): step 1/1 YP_004844339.1 Amino-acid biosynthesis; L-arginine biosynthesis; L-arginine from L-ornithine and carbamoyl phosphate: step 3/3 YP_004844373.1 Histidine-phosphotransfer intermediate YP_004844378.1 Major Facilitator Superfamily (MFS). TC 2.A.1.Y.Z. YP_004844417.1 Carbohydrate metabolism; tricarboxylic acid cycle YP_004844444.1 Amino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; L-lysine from DL-diaminopimelate: step 1/1 YP_004844628.1 GH13 - Hydrolyzes various disaccharides such as sucrose, maltose, and isomaltose with different efficiencies. Also hydrolyzes longer maltodextrins from maltotriose up to maltohexaose, but not maltoheptaose, palatinose, isomaltotriose, or isomaltotetraose (by similarity) YP_004844630.1 GH65 YP_004844636.1 GH13 YP_004844652.1 GH32 - Random hydrolysis of 2,6-beta-D-fructofuranosidic linkages in 2,6-beta-D-fructans (levans) containing more than 3 fructose units YP_004844653.1 TC 2.A.1.1.Z YP_004844677.1 GH5 YP_004844679.1 Efflux transporter, RND family, RND subunit YP_004844680.1 Efflux transporter, RND family, MFP subunit YP_004844697.1 GH53 YP_004844706.1 TC: 2.A.59.1.Z YP_004844768.1 GH92 YP_004844825.1 Amino-acid biosynthesis; L-leucine biosynthesis; L-leucine from 3-methyl-2-oxobutanoate: step 1/4 YP_004844826.1 Amino-acid biosynthesis; L-leucine biosynthesis; L-leucine from 3-methyl-2-oxobutanoate: step 2/4 YP_004844827.1 Amino-acid biosynthesis; L-leucine biosynthesis; L-leucine from 3-methyl-2-oxobutanoate: step 2/4 YP_004844828.1 Amino-acid biosynthesis; L-leucine biosynthesis; L-leucine from 3-methyl-2-oxobutanoate: step 3/4 YP_004844846.1 GH13 - Hydrolyzes various disaccharides such as sucrose, maltose, and isomaltose with different efficiencies. Also hydrolyzes longer maltodextrins from maltotriose up to maltohexaose, but not maltoheptaose, palatinose, isomaltotriose, or isomaltotetraose (by similarity) YP_004844848.1 GH97 YP_004844855.1 Sulfur metabolism; hydrogen sulfide biosynthesis; sulfite from sulfate: step 1/3 YP_004844857.1 Sulfur metabolism; hydrogen sulfide biosynthesis; sulfite from sulfate: step 1/3 YP_004844858.1 Sulfur metabolism; hydrogen sulfide biosynthesis; sulfite from sulfate: step 3/3 YP_004844875.1 Amino-acid biosynthesis; L-tyrosine biosynthesis; L-tyrosine from prephenate: step 1/2 YP_004844888.1 CE12 YP_004844893.1 GH88 - Candidate d-4,5-unsaturated beta-glycuronidase YP_004844896.1 GH28 -Candidate polygalacturonase precursor YP_004844899.1 Carbohydrate metabolism; pentose and glucuronate interconversion YP_004844903.1 Carbohydrate metabolism; pentose and glucuronate interconversion YP_004844904.1 Carbohydrate metabolism; L-idonic acid degradation YP_004844905.1 Glycan degradation; pectin degradation YP_004844906.1 TC 2.A.1.14.2 YP_004844933.1 Involved in the uptake of ammonia YP_004844991.1 Produces ATP from ADP in the presence of a proton gradient across the membrane (by similarity) YP_004844992.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is the catalytic subunit (by similarity) YP_004845096.1 Retron-type reverse transcriptase YP_004845154.1 [Mn] YP_004845215.1 Nucleotide-sugar biosynthesis; GDP-L-fucose biosynthesis via de novo pathway; GDP-L-fucose from GDP-D-mannose: step 2/2 YP_004845216.1 Nucleotide-sugar biosynthesis; GDP-L-fucose biosynthesis via de novo pathway; GDP-L-fucose from GDP-D-mannose: step 1/2 YP_006883001.1 Likely essential for plasmid replication and involved in copy control functions YP_006883003.1 Mediates initiation of conjugal transfer possibly by introducing a single-stranded nick at the potential origin of transfer (by similarity) YP_006883004.1 Similar to protein of unknown function encoded by ORF3 of the Flavobacterium psychrophilum cryptic plasmid pCP1