-- dump date 20250216_235517 -- class Genbank::Contig -- table contig_comment -- id comment NZ_AP024749.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to AP024749.1.REFSEQ INFORMATION: The reference sequence is identical to AP024749.1. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to AP024749.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to AP024749.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to AP024749.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.4 (https://dfast.nig.ac.jp).REFSEQ INFORMATION: The reference sequence is identical to AP024749.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.4 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to AP024749.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.4 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8REFSEQ INFORMATION: The reference sequence is identical to AP024749.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.4 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 120xREFSEQ INFORMATION: The reference sequence is identical to AP024749.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.4 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 120x Sequencing Technology :: Miseq; GridIONREFSEQ INFORMATION: The reference sequence is identical to AP024749.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.4 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 120x Sequencing Technology :: Miseq; GridION ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to AP024749.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.4 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 120x Sequencing Technology :: Miseq; GridION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to AP024749.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.4 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 120x Sequencing Technology :: Miseq; GridION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to AP024749.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.4 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 120x Sequencing Technology :: Miseq; GridION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_019702945.1-RS_2024_10_11REFSEQ INFORMATION: The reference sequence is identical to AP024749.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.4 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 120x Sequencing Technology :: Miseq; GridION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_019702945.1-RS_2024_10_11 Annotation Date :: 10/11/2024 13:06:00REFSEQ INFORMATION: The reference sequence is identical to AP024749.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.4 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 120x Sequencing Technology :: Miseq; GridION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_019702945.1-RS_2024_10_11 Annotation Date :: 10/11/2024 13:06:00 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to AP024749.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.4 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 120x Sequencing Technology :: Miseq; GridION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_019702945.1-RS_2024_10_11 Annotation Date :: 10/11/2024 13:06:00 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to AP024749.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.4 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 120x Sequencing Technology :: Miseq; GridION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_019702945.1-RS_2024_10_11 Annotation Date :: 10/11/2024 13:06:00 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to AP024749.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.4 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 120x Sequencing Technology :: Miseq; GridION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_019702945.1-RS_2024_10_11 Annotation Date :: 10/11/2024 13:06:00 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to AP024749.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.4 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 120x Sequencing Technology :: Miseq; GridION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_019702945.1-RS_2024_10_11 Annotation Date :: 10/11/2024 13:06:00 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.8REFSEQ INFORMATION: The reference sequence is identical to AP024749.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.4 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 120x Sequencing Technology :: Miseq; GridION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_019702945.1-RS_2024_10_11 Annotation Date :: 10/11/2024 13:06:00 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.8 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to AP024749.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.4 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 120x Sequencing Technology :: Miseq; GridION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_019702945.1-RS_2024_10_11 Annotation Date :: 10/11/2024 13:06:00 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.8 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,633REFSEQ INFORMATION: The reference sequence is identical to AP024749.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.4 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 120x Sequencing Technology :: Miseq; GridION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_019702945.1-RS_2024_10_11 Annotation Date :: 10/11/2024 13:06:00 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.8 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,633 CDSs (total) :: 2,570REFSEQ INFORMATION: The reference sequence is identical to AP024749.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.4 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 120x Sequencing Technology :: Miseq; GridION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_019702945.1-RS_2024_10_11 Annotation Date :: 10/11/2024 13:06:00 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.8 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,633 CDSs (total) :: 2,570 Genes (coding) :: 2,565REFSEQ INFORMATION: The reference sequence is identical to AP024749.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.4 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 120x Sequencing Technology :: Miseq; GridION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_019702945.1-RS_2024_10_11 Annotation Date :: 10/11/2024 13:06:00 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.8 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,633 CDSs (total) :: 2,570 Genes (coding) :: 2,565 CDSs (with protein) :: 2,565REFSEQ INFORMATION: The reference sequence is identical to AP024749.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.4 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 120x Sequencing Technology :: Miseq; GridION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_019702945.1-RS_2024_10_11 Annotation Date :: 10/11/2024 13:06:00 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.8 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,633 CDSs (total) :: 2,570 Genes (coding) :: 2,565 CDSs (with protein) :: 2,565 Genes (RNA) :: 63REFSEQ INFORMATION: The reference sequence is identical to AP024749.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.4 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 120x Sequencing Technology :: Miseq; GridION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_019702945.1-RS_2024_10_11 Annotation Date :: 10/11/2024 13:06:00 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.8 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,633 CDSs (total) :: 2,570 Genes (coding) :: 2,565 CDSs (with protein) :: 2,565 Genes (RNA) :: 63 rRNAs :: 3, 3, 3 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to AP024749.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.4 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 120x Sequencing Technology :: Miseq; GridION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_019702945.1-RS_2024_10_11 Annotation Date :: 10/11/2024 13:06:00 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.8 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,633 CDSs (total) :: 2,570 Genes (coding) :: 2,565 CDSs (with protein) :: 2,565 Genes (RNA) :: 63 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to AP024749.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.4 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 120x Sequencing Technology :: Miseq; GridION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_019702945.1-RS_2024_10_11 Annotation Date :: 10/11/2024 13:06:00 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.8 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,633 CDSs (total) :: 2,570 Genes (coding) :: 2,565 CDSs (with protein) :: 2,565 Genes (RNA) :: 63 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 51REFSEQ INFORMATION: The reference sequence is identical to AP024749.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.4 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 120x Sequencing Technology :: Miseq; GridION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_019702945.1-RS_2024_10_11 Annotation Date :: 10/11/2024 13:06:00 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.8 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,633 CDSs (total) :: 2,570 Genes (coding) :: 2,565 CDSs (with protein) :: 2,565 Genes (RNA) :: 63 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 3REFSEQ INFORMATION: The reference sequence is identical to AP024749.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.4 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 120x Sequencing Technology :: Miseq; GridION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_019702945.1-RS_2024_10_11 Annotation Date :: 10/11/2024 13:06:00 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.8 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,633 CDSs (total) :: 2,570 Genes (coding) :: 2,565 CDSs (with protein) :: 2,565 Genes (RNA) :: 63 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 3 Pseudo Genes (total) :: 6REFSEQ INFORMATION: The reference sequence is identical to AP024749.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.4 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 120x Sequencing Technology :: Miseq; GridION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_019702945.1-RS_2024_10_11 Annotation Date :: 10/11/2024 13:06:00 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.8 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,633 CDSs (total) :: 2,570 Genes (coding) :: 2,565 CDSs (with protein) :: 2,565 Genes (RNA) :: 63 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 3 Pseudo Genes (total) :: 6 CDSs (without protein) :: 5REFSEQ INFORMATION: The reference sequence is identical to AP024749.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.4 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 120x Sequencing Technology :: Miseq; GridION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_019702945.1-RS_2024_10_11 Annotation Date :: 10/11/2024 13:06:00 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.8 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,633 CDSs (total) :: 2,570 Genes (coding) :: 2,565 CDSs (with protein) :: 2,565 Genes (RNA) :: 63 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 3 Pseudo Genes (total) :: 6 CDSs (without protein) :: 5 Pseudo Genes (ambiguous residues) :: 0 of 6REFSEQ INFORMATION: The reference sequence is identical to AP024749.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.4 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 120x Sequencing Technology :: Miseq; GridION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_019702945.1-RS_2024_10_11 Annotation Date :: 10/11/2024 13:06:00 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.8 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,633 CDSs (total) :: 2,570 Genes (coding) :: 2,565 CDSs (with protein) :: 2,565 Genes (RNA) :: 63 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 3 Pseudo Genes (total) :: 6 CDSs (without protein) :: 5 Pseudo Genes (ambiguous residues) :: 0 of 6 Pseudo Genes (frameshifted) :: 1 of 6REFSEQ INFORMATION: The reference sequence is identical to AP024749.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.4 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 120x Sequencing Technology :: Miseq; GridION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_019702945.1-RS_2024_10_11 Annotation Date :: 10/11/2024 13:06:00 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.8 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,633 CDSs (total) :: 2,570 Genes (coding) :: 2,565 CDSs (with protein) :: 2,565 Genes (RNA) :: 63 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 3 Pseudo Genes (total) :: 6 CDSs (without protein) :: 5 Pseudo Genes (ambiguous residues) :: 0 of 6 Pseudo Genes (frameshifted) :: 1 of 6 Pseudo Genes (incomplete) :: 4 of 6REFSEQ INFORMATION: The reference sequence is identical to AP024749.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.4 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 120x Sequencing Technology :: Miseq; GridION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_019702945.1-RS_2024_10_11 Annotation Date :: 10/11/2024 13:06:00 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.8 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,633 CDSs (total) :: 2,570 Genes (coding) :: 2,565 CDSs (with protein) :: 2,565 Genes (RNA) :: 63 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 3 Pseudo Genes (total) :: 6 CDSs (without protein) :: 5 Pseudo Genes (ambiguous residues) :: 0 of 6 Pseudo Genes (frameshifted) :: 1 of 6 Pseudo Genes (incomplete) :: 4 of 6 Pseudo Genes (internal stop) :: 0 of 6REFSEQ INFORMATION: The reference sequence is identical to AP024749.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.4 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 120x Sequencing Technology :: Miseq; GridION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_019702945.1-RS_2024_10_11 Annotation Date :: 10/11/2024 13:06:00 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.8 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,633 CDSs (total) :: 2,570 Genes (coding) :: 2,565 CDSs (with protein) :: 2,565 Genes (RNA) :: 63 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 3 Pseudo Genes (total) :: 6 CDSs (without protein) :: 5 Pseudo Genes (ambiguous residues) :: 0 of 6 Pseudo Genes (frameshifted) :: 1 of 6 Pseudo Genes (incomplete) :: 4 of 6 Pseudo Genes (internal stop) :: 0 of 6 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to AP024749.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.4 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 120x Sequencing Technology :: Miseq; GridION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_019702945.1-RS_2024_10_11 Annotation Date :: 10/11/2024 13:06:00 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.8 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,633 CDSs (total) :: 2,570 Genes (coding) :: 2,565 CDSs (with protein) :: 2,565 Genes (RNA) :: 63 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 3 Pseudo Genes (total) :: 6 CDSs (without protein) :: 5 Pseudo Genes (ambiguous residues) :: 0 of 6 Pseudo Genes (frameshifted) :: 1 of 6 Pseudo Genes (incomplete) :: 4 of 6 Pseudo Genes (internal stop) :: 0 of 6 ##Genome-Annotation-Data-END## COMPLETENESS: full length.