-- dump date 20240506_054824 -- class Genbank::Contig -- table contig_comment -- id comment NZ_CP076680.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP076680.1.REFSEQ INFORMATION: The reference sequence is identical to CP076680.1. Bacteria and source DNA available from CHU Grenoble Alpes.REFSEQ INFORMATION: The reference sequence is identical to CP076680.1. Bacteria and source DNA available from CHU Grenoble Alpes. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP076680.1. Bacteria and source DNA available from CHU Grenoble Alpes. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP076680.1. Bacteria and source DNA available from CHU Grenoble Alpes. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP076680.1. Bacteria and source DNA available from CHU Grenoble Alpes. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP076680.1. Bacteria and source DNA available from CHU Grenoble Alpes. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 09-JAN-2021REFSEQ INFORMATION: The reference sequence is identical to CP076680.1. Bacteria and source DNA available from CHU Grenoble Alpes. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 09-JAN-2021 Assembly Method :: Unicycler v. january-2021REFSEQ INFORMATION: The reference sequence is identical to CP076680.1. Bacteria and source DNA available from CHU Grenoble Alpes. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 09-JAN-2021 Assembly Method :: Unicycler v. january-2021 Assembly Name :: CHUGA-F75REFSEQ INFORMATION: The reference sequence is identical to CP076680.1. Bacteria and source DNA available from CHU Grenoble Alpes. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 09-JAN-2021 Assembly Method :: Unicycler v. january-2021 Assembly Name :: CHUGA-F75 Genome Representation :: FullREFSEQ INFORMATION: The reference sequence is identical to CP076680.1. Bacteria and source DNA available from CHU Grenoble Alpes. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 09-JAN-2021 Assembly Method :: Unicycler v. january-2021 Assembly Name :: CHUGA-F75 Genome Representation :: Full Expected Final Version :: YesREFSEQ INFORMATION: The reference sequence is identical to CP076680.1. Bacteria and source DNA available from CHU Grenoble Alpes. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 09-JAN-2021 Assembly Method :: Unicycler v. january-2021 Assembly Name :: CHUGA-F75 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1.0xREFSEQ INFORMATION: The reference sequence is identical to CP076680.1. Bacteria and source DNA available from CHU Grenoble Alpes. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 09-JAN-2021 Assembly Method :: Unicycler v. january-2021 Assembly Name :: CHUGA-F75 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinIONREFSEQ INFORMATION: The reference sequence is identical to CP076680.1. Bacteria and source DNA available from CHU Grenoble Alpes. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 09-JAN-2021 Assembly Method :: Unicycler v. january-2021 Assembly Name :: CHUGA-F75 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP076680.1. Bacteria and source DNA available from CHU Grenoble Alpes. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 09-JAN-2021 Assembly Method :: Unicycler v. january-2021 Assembly Name :: CHUGA-F75 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP076680.1. Bacteria and source DNA available from CHU Grenoble Alpes. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 09-JAN-2021 Assembly Method :: Unicycler v. january-2021 Assembly Name :: CHUGA-F75 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP076680.1. Bacteria and source DNA available from CHU Grenoble Alpes. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 09-JAN-2021 Assembly Method :: Unicycler v. january-2021 Assembly Name :: CHUGA-F75 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 04:58:48REFSEQ INFORMATION: The reference sequence is identical to CP076680.1. Bacteria and source DNA available from CHU Grenoble Alpes. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 09-JAN-2021 Assembly Method :: Unicycler v. january-2021 Assembly Name :: CHUGA-F75 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 04:58:48 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP076680.1. Bacteria and source DNA available from CHU Grenoble Alpes. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 09-JAN-2021 Assembly Method :: Unicycler v. january-2021 Assembly Name :: CHUGA-F75 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 04:58:48 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP076680.1. Bacteria and source DNA available from CHU Grenoble Alpes. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 09-JAN-2021 Assembly Method :: Unicycler v. january-2021 Assembly Name :: CHUGA-F75 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 04:58:48 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP076680.1. Bacteria and source DNA available from CHU Grenoble Alpes. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 09-JAN-2021 Assembly Method :: Unicycler v. january-2021 Assembly Name :: CHUGA-F75 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 04:58:48 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP076680.1. Bacteria and source DNA available from CHU Grenoble Alpes. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 09-JAN-2021 Assembly Method :: Unicycler v. january-2021 Assembly Name :: CHUGA-F75 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 04:58:48 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5REFSEQ INFORMATION: The reference sequence is identical to CP076680.1. Bacteria and source DNA available from CHU Grenoble Alpes. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 09-JAN-2021 Assembly Method :: Unicycler v. january-2021 Assembly Name :: CHUGA-F75 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 04:58:48 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP076680.1. Bacteria and source DNA available from CHU Grenoble Alpes. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 09-JAN-2021 Assembly Method :: Unicycler v. january-2021 Assembly Name :: CHUGA-F75 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 04:58:48 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,899REFSEQ INFORMATION: The reference sequence is identical to CP076680.1. Bacteria and source DNA available from CHU Grenoble Alpes. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 09-JAN-2021 Assembly Method :: Unicycler v. january-2021 Assembly Name :: CHUGA-F75 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 04:58:48 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,899 CDSs (total) :: 1,846REFSEQ INFORMATION: The reference sequence is identical to CP076680.1. Bacteria and source DNA available from CHU Grenoble Alpes. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 09-JAN-2021 Assembly Method :: Unicycler v. january-2021 Assembly Name :: CHUGA-F75 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 04:58:48 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,899 CDSs (total) :: 1,846 Genes (coding) :: 1,843REFSEQ INFORMATION: The reference sequence is identical to CP076680.1. Bacteria and source DNA available from CHU Grenoble Alpes. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 09-JAN-2021 Assembly Method :: Unicycler v. january-2021 Assembly Name :: CHUGA-F75 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 04:58:48 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,899 CDSs (total) :: 1,846 Genes (coding) :: 1,843 CDSs (with protein) :: 1,843REFSEQ INFORMATION: The reference sequence is identical to CP076680.1. Bacteria and source DNA available from CHU Grenoble Alpes. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 09-JAN-2021 Assembly Method :: Unicycler v. january-2021 Assembly Name :: CHUGA-F75 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 04:58:48 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,899 CDSs (total) :: 1,846 Genes (coding) :: 1,843 CDSs (with protein) :: 1,843 Genes (RNA) :: 53REFSEQ INFORMATION: The reference sequence is identical to CP076680.1. Bacteria and source DNA available from CHU Grenoble Alpes. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 09-JAN-2021 Assembly Method :: Unicycler v. january-2021 Assembly Name :: CHUGA-F75 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 04:58:48 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,899 CDSs (total) :: 1,846 Genes (coding) :: 1,843 CDSs (with protein) :: 1,843 Genes (RNA) :: 53 rRNAs :: 4, 3, 3 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP076680.1. Bacteria and source DNA available from CHU Grenoble Alpes. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 09-JAN-2021 Assembly Method :: Unicycler v. january-2021 Assembly Name :: CHUGA-F75 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 04:58:48 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,899 CDSs (total) :: 1,846 Genes (coding) :: 1,843 CDSs (with protein) :: 1,843 Genes (RNA) :: 53 rRNAs :: 4, 3, 3 (5S, 16S, 23S) complete rRNAs :: 4, 3, 3 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP076680.1. Bacteria and source DNA available from CHU Grenoble Alpes. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 09-JAN-2021 Assembly Method :: Unicycler v. january-2021 Assembly Name :: CHUGA-F75 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 04:58:48 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,899 CDSs (total) :: 1,846 Genes (coding) :: 1,843 CDSs (with protein) :: 1,843 Genes (RNA) :: 53 rRNAs :: 4, 3, 3 (5S, 16S, 23S) complete rRNAs :: 4, 3, 3 (5S, 16S, 23S) tRNAs :: 39REFSEQ INFORMATION: The reference sequence is identical to CP076680.1. Bacteria and source DNA available from CHU Grenoble Alpes. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 09-JAN-2021 Assembly Method :: Unicycler v. january-2021 Assembly Name :: CHUGA-F75 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 04:58:48 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,899 CDSs (total) :: 1,846 Genes (coding) :: 1,843 CDSs (with protein) :: 1,843 Genes (RNA) :: 53 rRNAs :: 4, 3, 3 (5S, 16S, 23S) complete rRNAs :: 4, 3, 3 (5S, 16S, 23S) tRNAs :: 39 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP076680.1. Bacteria and source DNA available from CHU Grenoble Alpes. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 09-JAN-2021 Assembly Method :: Unicycler v. january-2021 Assembly Name :: CHUGA-F75 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 04:58:48 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,899 CDSs (total) :: 1,846 Genes (coding) :: 1,843 CDSs (with protein) :: 1,843 Genes (RNA) :: 53 rRNAs :: 4, 3, 3 (5S, 16S, 23S) complete rRNAs :: 4, 3, 3 (5S, 16S, 23S) tRNAs :: 39 ncRNAs :: 4 Pseudo Genes (total) :: 3REFSEQ INFORMATION: The reference sequence is identical to CP076680.1. Bacteria and source DNA available from CHU Grenoble Alpes. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 09-JAN-2021 Assembly Method :: Unicycler v. january-2021 Assembly Name :: CHUGA-F75 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 04:58:48 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,899 CDSs (total) :: 1,846 Genes (coding) :: 1,843 CDSs (with protein) :: 1,843 Genes (RNA) :: 53 rRNAs :: 4, 3, 3 (5S, 16S, 23S) complete rRNAs :: 4, 3, 3 (5S, 16S, 23S) tRNAs :: 39 ncRNAs :: 4 Pseudo Genes (total) :: 3 CDSs (without protein) :: 3REFSEQ INFORMATION: The reference sequence is identical to CP076680.1. Bacteria and source DNA available from CHU Grenoble Alpes. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 09-JAN-2021 Assembly Method :: Unicycler v. january-2021 Assembly Name :: CHUGA-F75 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 04:58:48 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,899 CDSs (total) :: 1,846 Genes (coding) :: 1,843 CDSs (with protein) :: 1,843 Genes (RNA) :: 53 rRNAs :: 4, 3, 3 (5S, 16S, 23S) complete rRNAs :: 4, 3, 3 (5S, 16S, 23S) tRNAs :: 39 ncRNAs :: 4 Pseudo Genes (total) :: 3 CDSs (without protein) :: 3 Pseudo Genes (ambiguous residues) :: 0 of 3REFSEQ INFORMATION: The reference sequence is identical to CP076680.1. Bacteria and source DNA available from CHU Grenoble Alpes. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 09-JAN-2021 Assembly Method :: Unicycler v. january-2021 Assembly Name :: CHUGA-F75 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 04:58:48 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,899 CDSs (total) :: 1,846 Genes (coding) :: 1,843 CDSs (with protein) :: 1,843 Genes (RNA) :: 53 rRNAs :: 4, 3, 3 (5S, 16S, 23S) complete rRNAs :: 4, 3, 3 (5S, 16S, 23S) tRNAs :: 39 ncRNAs :: 4 Pseudo Genes (total) :: 3 CDSs (without protein) :: 3 Pseudo Genes (ambiguous residues) :: 0 of 3 Pseudo Genes (frameshifted) :: 1 of 3REFSEQ INFORMATION: The reference sequence is identical to CP076680.1. Bacteria and source DNA available from CHU Grenoble Alpes. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 09-JAN-2021 Assembly Method :: Unicycler v. january-2021 Assembly Name :: CHUGA-F75 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 04:58:48 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,899 CDSs (total) :: 1,846 Genes (coding) :: 1,843 CDSs (with protein) :: 1,843 Genes (RNA) :: 53 rRNAs :: 4, 3, 3 (5S, 16S, 23S) complete rRNAs :: 4, 3, 3 (5S, 16S, 23S) tRNAs :: 39 ncRNAs :: 4 Pseudo Genes (total) :: 3 CDSs (without protein) :: 3 Pseudo Genes (ambiguous residues) :: 0 of 3 Pseudo Genes (frameshifted) :: 1 of 3 Pseudo Genes (incomplete) :: 2 of 3REFSEQ INFORMATION: The reference sequence is identical to CP076680.1. Bacteria and source DNA available from CHU Grenoble Alpes. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 09-JAN-2021 Assembly Method :: Unicycler v. january-2021 Assembly Name :: CHUGA-F75 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 04:58:48 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,899 CDSs (total) :: 1,846 Genes (coding) :: 1,843 CDSs (with protein) :: 1,843 Genes (RNA) :: 53 rRNAs :: 4, 3, 3 (5S, 16S, 23S) complete rRNAs :: 4, 3, 3 (5S, 16S, 23S) tRNAs :: 39 ncRNAs :: 4 Pseudo Genes (total) :: 3 CDSs (without protein) :: 3 Pseudo Genes (ambiguous residues) :: 0 of 3 Pseudo Genes (frameshifted) :: 1 of 3 Pseudo Genes (incomplete) :: 2 of 3 Pseudo Genes (internal stop) :: 0 of 3REFSEQ INFORMATION: The reference sequence is identical to CP076680.1. Bacteria and source DNA available from CHU Grenoble Alpes. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 09-JAN-2021 Assembly Method :: Unicycler v. january-2021 Assembly Name :: CHUGA-F75 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 04:58:48 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,899 CDSs (total) :: 1,846 Genes (coding) :: 1,843 CDSs (with protein) :: 1,843 Genes (RNA) :: 53 rRNAs :: 4, 3, 3 (5S, 16S, 23S) complete rRNAs :: 4, 3, 3 (5S, 16S, 23S) tRNAs :: 39 ncRNAs :: 4 Pseudo Genes (total) :: 3 CDSs (without protein) :: 3 Pseudo Genes (ambiguous residues) :: 0 of 3 Pseudo Genes (frameshifted) :: 1 of 3 Pseudo Genes (incomplete) :: 2 of 3 Pseudo Genes (internal stop) :: 0 of 3 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP076680.1. Bacteria and source DNA available from CHU Grenoble Alpes. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 09-JAN-2021 Assembly Method :: Unicycler v. january-2021 Assembly Name :: CHUGA-F75 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 04:58:48 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,899 CDSs (total) :: 1,846 Genes (coding) :: 1,843 CDSs (with protein) :: 1,843 Genes (RNA) :: 53 rRNAs :: 4, 3, 3 (5S, 16S, 23S) complete rRNAs :: 4, 3, 3 (5S, 16S, 23S) tRNAs :: 39 ncRNAs :: 4 Pseudo Genes (total) :: 3 CDSs (without protein) :: 3 Pseudo Genes (ambiguous residues) :: 0 of 3 Pseudo Genes (frameshifted) :: 1 of 3 Pseudo Genes (incomplete) :: 2 of 3 Pseudo Genes (internal stop) :: 0 of 3 ##Genome-Annotation-Data-END## COMPLETENESS: full length.