-- dump date 20140619_095114 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 393115000001 SEQ_END SEQ_END NC_008245.1 1892616 1892616 DR NC_008245.1; contig end 1892616..1892616 Francisella tularensis subsp. tularensis FSC198 YP_666215.1 CDS dnaA NC_008245.1 1 1521 D binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 1..1521 Francisella tularensis subsp. tularensis FSC198 4199350 YP_666216.1 CDS dnaN NC_008245.1 1558 2661 D Similar to DP3B_ECOLI (P00583) DNA polymerase III,beta chain from E. coli (366 aa). FASTA opt: 826 Z-score: 955.1 E(): 2.6e-45 Smith-Waterman score: 826; 35.230 identity in 369 aa overlap; DNA polymerase III subunit beta 1558..2661 Francisella tularensis subsp. tularensis FSC198 4199357 YP_666217.1 CDS isftu1 NC_008245.1 3204 3988 R ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and also mariner elements, show that this transposase shares strongly conserved residues, including a fully conserved dipeptide,Asp-Glu (DE), and a block consisting of a fully conserved Asp and highly conserved Glu, separated by 34 or 35 residues (D35E). The conserved dipeptide is only present if ribosomal frameshifting occurs.; transposase complement(join(3204..3662,3662..3988)) Francisella tularensis subsp. tularensis FSC198 4199614 YP_666218.1 CDS FTF0006 NC_008245.1 4661 5869 D Similar to Q9ZE69 Proline/betaine transporter (PROP1) from Rickettsia prowazekii (418 aa). FASTA: opt: 605 Z-score: 665.8 E(): 3.4e-29 Smith-Waterman score: 605; 28.293 identity in 410 aa overlap ORF ftt0006; MFS superfamily proline/ betaine transporter 4661..5869 Francisella tularensis subsp. tularensis FSC198 4200573 YP_666219.1 CDS aspS NC_008245.1 6044 7822 D catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 6044..7822 Francisella tularensis subsp. tularensis FSC198 4199691 YP_666220.1 CDS FTF0013c NC_008245.1 11450 12232 R ORF ftt0013c; lipoprotein complement(11450..12232) Francisella tularensis subsp. tularensis FSC198 4200578 YP_666221.1 CDS FTF0014c NC_008245.1 12472 12870 R ORF ftt0014c; hypothetical protein complement(12472..12870) Francisella tularensis subsp. tularensis FSC198 4200579 YP_666222.1 CDS purB NC_008245.1 13198 14496 D Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 13198..14496 Francisella tularensis subsp. tularensis FSC198 4199115 YP_666223.1 CDS FTF0016 NC_008245.1 14530 15108 D ORF ftt0016; hypothetical protein 14530..15108 Francisella tularensis subsp. tularensis FSC198 4200580 YP_666224.1 CDS FTF0017 NC_008245.1 15195 16736 D Similar to Q8PAK3 Toxin secretion ABC transporter ATP-binding protein from Xanthomonas axonopodis (563 aa). FASTA: opt: 454 Z-score: 516.4 E(): 7.1e-21 Smith-Waterman score: 454; 24.395identity in 496 aa overlap ORF ftt0017; hypothetical protein 15195..16736 Francisella tularensis subsp. tularensis FSC198 4200581 YP_666225.1 CDS FTF0018 NC_008245.1 16744 17817 D Similar to Q8PMA5 RND efflux membrane fusion protein from Xanthomonas axonopodis (354 aa). FASTA: opt: 851 Z-score: 971.0 E(): 3.4e-46 Smith-Waterman score: 851; 37.846 identity in 325 aa overlap ORF ftt0018; secretion protein 16744..17817 Francisella tularensis subsp. tularensis FSC198 4200582 YP_666226.1 CDS gatC NC_008245.1 17900 18181 D Similar to Q82T57 Glu-tRNAGln amidotransferase C subunit from Nitrosomonas europaea (95 aa). FASTA:i opt: 188 Z-score: 259.9 E(): 1.4e-06 Smith-Waterman score: 188; 31.818 identity in 88 aa overlap; Glu-tRNAGln amidotransferase C subunit 17900..18181 Francisella tularensis subsp. tularensis FSC198 4199275 YP_666227.1 CDS gatA NC_008245.1 18190 19635 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 18190..19635 Francisella tularensis subsp. tularensis FSC198 4199273 YP_666228.1 CDS gatB NC_008245.1 19638 21059 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 19638..21059 Francisella tularensis subsp. tularensis FSC198 4199274 YP_666229.1 CDS FTF0022 NC_008245.1 21074 21481 D ORF ftt0022; hypothetical protein 21074..21481 Francisella tularensis subsp. tularensis FSC198 4200583 YP_666230.1 CDS FTF0023c NC_008245.1 21497 22378 R Similar to Q9F7Y6 Glycerophospholipid-cholesterol acyltransferase from Aeromonas salmonicida (336 aa). FASTA: opt: 367 Z-score: 437.4 E(): 1.8e-16 Smith-Waterman score: 407; 30.183 identity in 328 aa overlap ORF ftt0023c; lipase/acyltransferase complement(21497..22378) Francisella tularensis subsp. tularensis FSC198 4200584 YP_666231.1 CDS FTF0024c NC_008245.1 22646 22990 R ORF ftt0024c; hypothetical protein complement(22646..22990) Francisella tularensis subsp. tularensis FSC198 4200585 YP_666232.1 CDS FTF0025c NC_008245.1 23038 24567 R ORF ftt0025c; hypothetical protein complement(23038..24567) Francisella tularensis subsp. tularensis FSC198 4200586 YP_666233.1 CDS FTF0026c NC_008245.1 24652 25842 R Similar to Q9HWP5 Probable MFS transporter from Pseudomonas aeruginosa (402 aa). FASTA: opt: 568 Z-score: 586.0 E(): 9.5e-25 Smith-Waterman score: 568; 26.425 identity in 386 aa overlap ORF ftt0026c; hypothetical protein complement(24652..25842) Francisella tularensis subsp. tularensis FSC198 4200587 YP_666234.1 CDS lysA1 NC_008245.1 25858 27111 R Similar to DCDA_BACSU (P23630) Diaminopimelate decarboxylase from Bacillus subtilis (441 aa). FASTA: opt: 437 Z-score: 538.0 E(): 4.5e-22 Smith-Waterman score: 437; 27.295 identity in 414 aa overlap; diaminopimelate decarboxylase complement(25858..27111) Francisella tularensis subsp. tularensis FSC198 4199652 YP_666235.1 CDS FTF0028c NC_008245.1 27104 28366 R Similar to YCEE_ECOLI (P25744) Hypothetical transport protein yce from E. coli (408 aa). FASTA: opt: 364 Z-score: 408.7 E(): 7.1e-15 Smith-Waterman score: 450; 26.582 identity in 395 aa overlap ORF ftt0028c; hypothetical protein complement(27104..28366) Francisella tularensis subsp. tularensis FSC198 4200588 YP_666236.1 CDS FTF0029c NC_008245.1 28373 30292 R Similar to AAO89973 (Q83EA5) FrgA protein from Coxiella burnetii (528 aa). FASTA: opt: 1047 Z-score: 1237.4 E(): 4.9e-61 Smith-Waterman score: 1053; 34.051 identity in 511 aa overlap ORF ftt0029c; hypothetical protein complement(28373..30292) Francisella tularensis subsp. tularensis FSC198 4200589 YP_666237.1 CDS fur NC_008245.1 30545 30967 R Similar to FUR_ECOLI (P06975) Ferric uptake regulation protein from E. coli (148 aa). FASTA: opt: 396 Z-score: 515.7 E(): 7.8e-21 Smith-Waterman score: 396; 40.714 identity in 140 aa overlap; ferric uptake regulation protein complement(30545..30967) Francisella tularensis subsp. tularensis FSC198 4199202 YP_666238.1 CDS nuoA NC_008245.1 31176 31574 D Similar to Q9A6X0 NADH dehydrogenase I, A subunit from Caulobacter crescentus (125 aa). FASTA: opt: 398 Z-score: 508.1 E(): 2.1e-20 Smith-Waterman score: 398; 46.565 identity in 131 aa overlap; NADH dehydrogenase I subunit A 31176..31574 Francisella tularensis subsp. tularensis FSC198 4200245 YP_666239.1 CDS nuoB NC_008245.1 31565 32041 D The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 31565..32041 Francisella tularensis subsp. tularensis FSC198 4200246 YP_666240.1 CDS nuoC NC_008245.1 32038 32688 D Similar to NUOC_NEIMB (Q9K1C1) NADH-quinone oxidoreductase chain from Neisseria meningitidis (197 aa). FASTA: opt: 516 Z-score: 659.3 E(): 7.8e-29 Smith-Waterman score: 568; 44.286identity in 210 aa overlap; NADH dehydrogenase I 32038..32688 Francisella tularensis subsp. tularensis FSC198 4200247 YP_666241.1 CDS nuoD NC_008245.1 32710 33963 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D 32710..33963 Francisella tularensis subsp. tularensis FSC198 4200248 YP_666242.1 CDS nuoE NC_008245.1 33973 34461 D Similar to Q83BQ9 NADH dehydrogenase I, E subunit from Xanthomonas campestris (174 aa). FASTA: opt: 528 Z-score: 689.7 E(): 1.6e-30 Smith-Waterman score: 528; 52.318 identity in 151 aa overlap; NADH dehydrogenase I subunit E 33973..34461 Francisella tularensis subsp. tularensis FSC198 4200249 YP_666243.1 CDS nuoF NC_008245.1 34468 35742 D Similar to Q83BR0 NADH dehydrogenase I, F subunit from Coxiella burnetti (422 aa). FASTA: opt: 1851 Z-score: 2306.0 E(): 1.5e-120 Smith-Waterman score: 1851; 61.848 identity in 422 aa overlap; NADH dehydrogenase I subunit F 34468..35742 Francisella tularensis subsp. tularensis FSC198 4200745 YP_666244.1 CDS nuoG NC_008245.1 35760 38126 D Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit G 35760..38126 Francisella tularensis subsp. tularensis FSC198 4200746 YP_666245.1 CDS nuoH NC_008245.1 38128 39138 D Similar to Q83BR2 NADH dehydrogenase I, H subunit from Coxiella burnetii (340 aa). FASTA: opt: 1510 Z-score: 1695.3 E(): 1.5e-86 Smith-Waterman score: 1510; 60.843 identity in 332 aa overlap; NADH dehydrogenase I subunit H 38128..39138 Francisella tularensis subsp. tularensis FSC198 4200747 YP_666246.1 CDS nuoI NC_008245.1 39152 39640 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 39152..39640 Francisella tularensis subsp. tularensis FSC198 4200748 YP_666247.1 CDS nuoJ NC_008245.1 39645 40250 D Similar to Q9K1B2 NADH dehydrogenase I, J subunit from Neisseria meningitidis (223 aa). FASTA: opt: 387 Z-score: 452.6 E(): 2.6e-17 Smith-Waterman score: 387; 38.191 identity in 199 aa overlap; NADH dehydrogenase I subunit J 39645..40250 Francisella tularensis subsp. tularensis FSC198 4200749 YP_666248.1 CDS nuoK NC_008245.1 40228 40560 D Similar to Q9A6Y6 NADH dehydrogenase I, K subunit from Caulobacter crescentus (101 aa). FASTA: opt: 300 Z-score: 405.7 E(): 1e-14 Smith-Waterman score: 300; 43.000 identity in 100 aa overlap; NADH dehydrogenase I subunit K 40228..40560 Francisella tularensis subsp. tularensis FSC198 4200750 YP_666249.1 CDS nuoL NC_008245.1 40570 42579 D Similar to Q83BR6 NADH dehydrogenase I, L subunit from Coxiella burnetii (653 aa). FASTA: opt: 1934 Z-score: 2065.6 E(): 3.6e-107 Smith-Waterman score: 2090; 50.760 identity in 658 aa overlap; NADH dehydrogenase I subunit L 40570..42579 Francisella tularensis subsp. tularensis FSC198 4200751 YP_666250.1 CDS nuoM NC_008245.1 42605 44194 D Similar to Q83BR7 NADH dehydrogenase I, M subunit from Coxiella burnetii (506 aa). FASTA: opt: 1099 Z-score: 1147.9 E(): 4.8e-56 Smith-Waterman score: 1659; 47.228 identity in 523 aa overlap; NADH dehydrogenase I subunit M 42605..44194 Francisella tularensis subsp. tularensis FSC198 4200752 YP_666251.1 CDS nuoN NC_008245.1 44204 45661 D Similar to Q83BR8 NADH dehydrogenase I, N subunit from Coxiella burnetii (482 aa). FASTA: opt: 1231 Z-score: 1222.9 E(): 3.2e-60 Smith-Waterman score: 1231; 39.914 identity in 466 aa overlap; NADH dehydrogenase I subunit N 44204..45661 Francisella tularensis subsp. tularensis FSC198 4200753 YP_666252.1 CDS FTF0045 NC_008245.1 45737 45931 D Similar to Q8DDC7 Conserved hypothetical protein from Vibrio vulnificus (83 aa). FASTA: opt: 165 Z-score: 224.7 E(): 0.00013 Smith-Waterman score: 165; 45.763 identity in 59 aa overlap ORF ftt0045; hypothetical protein 45737..45931 Francisella tularensis subsp. tularensis FSC198 4200590 YP_666253.1 CDS hemE NC_008245.1 47478 48512 D catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 47478..48512 Francisella tularensis subsp. tularensis FSC198 4200374 YP_666254.1 CDS FTF0048 NC_008245.1 48732 49190 D Similar to Q88DV5 Conserved hypothetical protein from Pseudomonas putida (169 aa). FASTA: opt: 402 Z-score: 490.7 E(): 1.7e-19 Smith-Waterman score: 402; 43.243 identity in 148 aa overlap ORF ftt0048; hypothetical protein 48732..49190 Francisella tularensis subsp. tularensis FSC198 4199153 YP_666255.1 CDS nusA NC_008245.1 49208 50677 D modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 49208..50677 Francisella tularensis subsp. tularensis FSC198 4200757 YP_666256.1 CDS infB NC_008245.1 50716 53256 D Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 50716..53256 Francisella tularensis subsp. tularensis FSC198 4199610 YP_666257.1 CDS rbfA NC_008245.1 53259 53690 D Similar to RBFA_ECOLI (P09170) Ribosome-binding factor A from E. coli (132 aa). FASTA: opt: 301 Z-score: 381.1 E(): 2.5e-13 Smith-Waterman score: 301; 41.935 identity in 124 aa overlap; ribosome-binding factor A 53259..53690 Francisella tularensis subsp. tularensis FSC198 4200596 YP_666258.1 CDS hisS NC_008245.1 53698 54963 D catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 53698..54963 Francisella tularensis subsp. tularensis FSC198 4200195 YP_666259.1 CDS FTF0053 NC_008245.1 54970 56268 D Similar to AAO90449 (Q83D24) Major facilitator family transporter from Coxiella burnetii (437 aa). FASTA: opt: 908 Z-score: 1023.7 E(): 3.6e-49 Smith-Waterman score: 909; 36.603 identity in 418 aa overlap ORF ftt0053; major facilitator transporter 54970..56268 Francisella tularensis subsp. tularensis FSC198 4199154 YP_666260.1 CDS FTF0054 NC_008245.1 56271 57338 D Similar to YHCM_ECOLI (P46442) Hypothetical protein yhcM from E. coli (375 aa). FASTA: opt: 872 Z-score: 1033.2 E(): 1.2e-49 Smith-Waterman score: 898; 39.833 identity in 359 aa overlap ORF ftt0054; ATPase 56271..57338 Francisella tularensis subsp. tularensis FSC198 4199155 YP_666261.1 CDS rluC NC_008245.1 57331 58260 D Similar to RLUC_ECOLI (P23851) Ribosomal large subunit pseudouridine synthase C from E. coli (319 aa). FASTA: opt: 791 Z-score: 972.5 E(): 2.8e-46 Smith-Waterman score: 791; 40.777 identity in 309 aa overlap; ribosomal large subunit pseudouridine synthase C 57331..58260 Francisella tularensis subsp. tularensis FSC198 4199222 YP_666262.1 CDS FTF0056c NC_008245.1 58262 59566 R Similar to Q83D24 (Q83D24) Major facilitator family transporter from Coxiella burnetii (437 aa). FASTA: opt: 1028 Z-score: 1172.6 E(): 2e-57 Smith-Waterman score: 1036; 40.187 identity in 428 aa overlap ORF ftt0056c; major facilitator transporter complement(58262..59566) Francisella tularensis subsp. tularensis FSC198 4199156 YP_666263.1 CDS FTF0057 NC_008245.1 59643 60074 D ORF ftt0057; hypothetical protein 59643..60074 Francisella tularensis subsp. tularensis FSC198 4199157 YP_666264.1 CDS atpB NC_008245.1 60127 60918 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 60127..60918 Francisella tularensis subsp. tularensis FSC198 4199693 YP_666265.1 CDS atpE NC_008245.1 60969 61274 D produces ATP from ADP in the presence of a proton gradient across the membrane; subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 60969..61274 Francisella tularensis subsp. tularensis FSC198 4199696 YP_666266.1 CDS atpF NC_008245.1 61320 61790 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B 61320..61790 Francisella tularensis subsp. tularensis FSC198 4199697 YP_666267.1 CDS atpH NC_008245.1 61810 62334 D Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta 61810..62334 Francisella tularensis subsp. tularensis FSC198 4199699 YP_666268.1 CDS atpA NC_008245.1 62353 63894 D produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 62353..63894 Francisella tularensis subsp. tularensis FSC198 4199692 YP_666269.1 CDS atpG NC_008245.1 63909 64805 D produces ATP from ADP in the presence of a proton gradient across the membrane; the gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 63909..64805 Francisella tularensis subsp. tularensis FSC198 4199698 YP_666270.1 CDS atpD NC_008245.1 64815 66191 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 64815..66191 Francisella tularensis subsp. tularensis FSC198 4199695 YP_666271.1 CDS atpC NC_008245.1 66204 66641 D produces ATP from ADP in the presence of a proton gradient across the membrane; the epsilon subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit epsilon 66204..66641 Francisella tularensis subsp. tularensis FSC198 4199694 YP_666272.1 CDS FTF0066 NC_008245.1 66852 69695 D ORF ftt0066; hypothetical protein 66852..69695 Francisella tularensis subsp. tularensis FSC198 4199158 YP_666273.1 CDS FTF0067c NC_008245.1 69712 70041 R Similar to Q8D879 Glutaredoxin-related protein from Vibrio vulnificus (112 aa). FASTA: opt: 485 Z-score: 630.6 E(): 2.8e-27 Smith-Waterman score: 485; 65.306 identity in 98 aa overlap ORF ftt0067c; glutaredoxin-like protein complement(69712..70041) Francisella tularensis subsp. tularensis FSC198 4199159 YP_666274.1 CDS sodB NC_008245.1 70177 70755 D Fe; Similar to SODF_ECOLI (P09157) Superoxide dismutase [Fe] from E. coli (192 aa). FASTA: opt: 896 Z-score: 1143.2 E(): 8.8e-56 Smith-Waterman score: 896; 66.316 identity in 190 aa overlap; superoxide dismutase 70177..70755 Francisella tularensis subsp. tularensis FSC198 4199077 YP_666275.1 CDS FTF0069c NC_008245.1 70763 70948 R ORF ftt0069c; hypothetical protein complement(70763..70948) Francisella tularensis subsp. tularensis FSC198 4199160 YP_666276.1 CDS ampG NC_008245.1 70960 72225 R Similar to AMPG_ECOLI (P36670) AmpG protein from E. coli (491 aa). FASTA: opt: 996 Z-score: 1121.1 E(): 1.5e-54 Smith-Waterman score: 996; 38.614 identity in 404 aa overlap; major facilitator superfamily transporter complement(70960..72225) Francisella tularensis subsp. tularensis FSC198 4199422 YP_666277.1 CDS gltA NC_008245.1 72314 73588 R Similar to CISY_PSEAE (P14165) Citrate synthase from Pseudomonas aeruginosa (428 aa). FASTA: opt: 1540 Z-score: 1956.3 E(): 4.5e-101 Smith-Waterman score: 1540; 57.353 identity in 408 aa overlap; citrate synthase complement(72314..73588) Francisella tularensis subsp. tularensis FSC198 4199799 YP_666278.1 CDS sdhC NC_008245.1 73831 74304 D Similar to Q884A1 Succinate dehydrogenase,cytochrome b556 subunit from Pseudomonas syringae (124 aa). FASTA: opt: 332 Z-score: 413.6 E(): 3.8e-15 Smith-Waterman score: 332; 39.844identity in 128 aa overlap; succinate dehydrogenase, cytochrome b556 73831..74304 Francisella tularensis subsp. tularensis FSC198 4200731 YP_666279.1 CDS sdhD NC_008245.1 74280 74648 D Similar to Q88FA6 Succinate dehydrogenase,hydrophobic membrane anchor protein from Pseudomonas putida (122 aa). FASTA: opt: 242 Z-score: 306.8 E(): 3.4e-09 Smith-Waterman score: 242; 34.677 identity in 124 aa overlap; succinate dehydrogenase hydrophobic membrane anchor protein 74280..74648 Francisella tularensis subsp. tularensis FSC198 4200732 YP_666280.1 CDS sdhA NC_008245.1 74661 76454 D Similar to Q9I3D5 Succinate dehydrogenase (A subunit) from Pseudomonas aeruginosa (590 aa). FASTA: opt: 2468 Z-score: 2874.7 E(): 3.2e-152 Smith-Waterman score: 2468; 61.139 identity in 597 aa overlap; succinate dehydrogenase, catalytic and NAD/flavoprotein subunit 74661..76454 Francisella tularensis subsp. tularensis FSC198 4200729 YP_666281.1 CDS sdhB NC_008245.1 76472 77173 D part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 76472..77173 Francisella tularensis subsp. tularensis FSC198 4200730 YP_666282.1 CDS sucA NC_008245.1 77191 80016 D SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 77191..80016 Francisella tularensis subsp. tularensis FSC198 4199087 YP_666283.1 CDS sucB NC_008245.1 80042 81511 D Similar to Q8EFN9 2-oxoglutarate dehydrogenase,E2 component, dihydrolipoamide succinyltransferase from Shewanella oneidensis (395 aa). FASTA: opt: 1379 Z-score: 1563.0 E(): 3.6e-79 Smith-Waterman score: 1379; 55.949 identity in 395 aa overlap; dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex 80042..81511 Francisella tularensis subsp. tularensis FSC198 4199088 YP_666284.1 CDS apt NC_008245.1 81551 82078 D catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 81551..82078 Francisella tularensis subsp. tularensis FSC198 4199429 YP_666285.1 CDS glmM NC_008245.1 82089 83420 D catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 82089..83420 Francisella tularensis subsp. tularensis FSC198 4199855 YP_666286.1 CDS tpiA NC_008245.1 83423 84184 D Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 83423..84184 Francisella tularensis subsp. tularensis FSC198 4199859 YP_666287.1 CDS secG NC_008245.1 84172 84525 D Similar to Q9KU83 Preprotein translocase, SecG subunit from Vibrio cholerae (111 aa). FASTA: opt: 283 Z-score: 369.6 E(): 1.1e-12 Smith-Waterman score: 289; 45.299identity in 117 aa overlap. Together with SecE and SecY forming an integral membrane complex.; preprotein translocase subunit SecG 84172..84525 Francisella tularensis subsp. tularensis FSC198 4200739 YP_666288.1 CDS FTF0083 NC_008245.1 85736 86212 D ORF ftt0083; hypothetical protein 85736..86212 Francisella tularensis subsp. tularensis FSC198 4199162 YP_666289.1 CDS hemN NC_008245.1 86209 87351 R Similar to Q87V87 Oxygen-independent coproporphyrinogen III oxidase,putative,from Pseudomonas syringae (404 aa). FASTA: opt: 1156 Z-score: 1386.6 E(): 2.4e-69 Smith-Waterman score: 1156; 46.791 identity in 374 aa overlap; oxygen-independent coproporphyrinogen III oxidase complement(86209..87351) Francisella tularensis subsp. tularensis FSC198 4200379 YP_666290.1 CDS FTF0085c NC_008245.1 87356 87733 R Similar to YWCD_BACSU P39602 Hypothetical protein ywcD from Bacillus subtilis (127 aa). FASTA: opt: 162 Z-score: 223.9 E(): 0.00013 Smith-Waterman score: 162; 26.667 identity in 120 aa overlap ORF ftt0085c; hypothetical protein complement(87356..87733) Francisella tularensis subsp. tularensis FSC198 4199163 YP_666291.1 CDS FTF0086 NC_008245.1 87803 88681 D Similar to Q9I078 Hypothetical protein PA2765 from Pseudomonas aeruginosa (299 aa). FASTA: opt: 656 Z-score: 793.3 E(): 2.4e-36 Smith-Waterman score: 656; 36.678 identity in 289 aa overlap ORF ftt0086; hypothetical protein 87803..88681 Francisella tularensis subsp. tularensis FSC198 4199164 YP_666292.1 CDS acnA NC_008245.1 88786 91599 D Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 88786..91599 Francisella tularensis subsp. tularensis FSC198 4199752 YP_666293.1 CDS pilT NC_008245.1 91694 92722 D Similar to Q8EBZ4 Twitching motility protein PilT from Shewanella oneidensis (345 aa). FASTA: opt: 1226 Z-score: 1391.3 E(): 1.3e-69 Smith-Waterman score: 1226; 57.186 identity in 334 aa overlap Required for pili retraction probably by filament disassembly. Homologous to pilB but which has the opposite effect. Unique to type IV pili.; Type IV pili nucleotide-binding protein 91694..92722 Francisella tularensis subsp. tularensis FSC198 4199733 YP_666294.1 CDS FTF0090c NC_008245.1 93784 94230 R Similar to Q87GR3 Hypothetical protein from Vibrio parahaemolyticus (148 aa). FASTA: opt: 160 Z-score: 212.3 E(): 0.00057 Smith-Waterman score: 160; 29.104 identity in 134 aa overlap ORF ftt0090c; hypothetical protein complement(93784..94230) Francisella tularensis subsp. tularensis FSC198 4199166 YP_666295.1 CDS appB NC_008245.1 94241 95203 R Similar to Q87H27 Cytochrome BD2, subunit II from Vibrio parahaemolyticus (335 aa). FASTA: opt: 573 Z-score: 669.5 E(): 1.9e-29 Smith-Waterman score: 750; 34.743 identity in 331 aa overlap; cytochrome oxidase bd-II subunit II complement(94241..95203) Francisella tularensis subsp. tularensis FSC198 4199427 YP_666296.1 CDS FTF0093 NC_008245.1 96819 97700 D Similar to Q8FFI5 Hypothetical protein yfcH from E. coli (297 aa). FASTA: opt: 498 Z-score: 611.0 E(): 3.8e-26 Smith-Waterman score: 498; 32.673 identity in 303 aa overlap ORF ftt0093; hypothetical protein 96819..97700 Francisella tularensis subsp. tularensis FSC198 4199167 YP_666297.1 CDS qseC NC_008245.1 97697 99124 R Similar to AAO90737 (Q83CA0) Sensor histidine kinase from Coxiella burnetii (478 aa). FASTA: opt: 653 Z-score: 752.8 E(): 4.9e-34 Smith-Waterman score: 677; 29.083 identity in 447 aa overlap Sensory histidine kinase in two-component regulatory system with QseB, regulates flagella and motility by quorum sensing in E. coli,according to Q8X524; sensor histidine kinase complement(97697..99124) Francisella tularensis subsp. tularensis FSC198 4200593 YP_666298.1 CDS FTF0095 NC_008245.1 99240 100196 D ORF ftt0095; hypothetical protein 99240..100196 Francisella tularensis subsp. tularensis FSC198 4199168 YP_666299.1 CDS FTF0096 NC_008245.1 100438 101478 D ORF ftt0096; hypothetical protein 100438..101478 Francisella tularensis subsp. tularensis FSC198 4199169 YP_666300.1 CDS FTF0097 NC_008245.1 101612 102157 D ORF ftt0097; hypothetical protein 101612..102157 Francisella tularensis subsp. tularensis FSC198 4199170 YP_666301.1 CDS isftu1 NC_008245.1 102231 103015 R ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and also mariner elements, show that this transposase shares strongly conserved residues, including a fully conserved dipeptide,Asp-Glu (DE), and a block consisting of a fully conserved Asp and highly conserved Glu, separated by 34 or 35 residues (D35E). The conserved dipeptide is only present if ribosomal frameshifting occurs.; transposase complement(join(102231..102689,102689..103015)) Francisella tularensis subsp. tularensis FSC198 4199616 YP_666302.1 CDS isftu2 NC_008245.1 103117 103860 D ISFtu2. Transposase, member of the IS5 family. Identical to Q8GM03 putative transposase from Francisella tularensis (247 aa).; transposase 103117..103860 Francisella tularensis subsp. tularensis FSC198 4200189 YP_666303.1 CDS FTF0101 NC_008245.1 104530 105543 D Similar to Y402_RICPR (Q9ZDC9) Hypothetical protein RP402 from Rickettsia prowazekii (317 aa). FASTA: opt: 431 Z-score: 518.0 E(): 5.9e-21 Smith-Waterman score: 432; 28.909 identity in 339 aa overlap ORF ftt0101; hypothetical protein 104530..105543 Francisella tularensis subsp. tularensis FSC198 4200535 YP_666304.1 CDS FTF0103c NC_008245.1 106988 107569 R ORF ftt0103c; hypothetical protein complement(106988..107569) Francisella tularensis subsp. tularensis FSC198 4200537 YP_666305.1 CDS FTF0104c NC_008245.1 107814 109091 R Similar to Q83DX6 Major facilitator family transporter from Coxiella burnetii (421 aa). FASTA: opt: 995 Z-score: 1049.4 E(): 1.5e-50 Smith-Waterman score: 995; 39.066identity in 407 aa overlap ORF ftt0104c; major facilitator transporter complement(107814..109091) Francisella tularensis subsp. tularensis FSC198 4200538 YP_666306.1 CDS FTF0105c NC_008245.1 109223 112336 R Similar to AAO90606 (Q83CM1) Transporter,AcrB/AcrD/AcrF family from Coxiella burnetii (1019 aa). FASTA: opt: 2662 Z-score: 2840.6 E(): 2.3e-150 Smith-Waterman score: 3071; 45.171identity in 1025 aa overlap ORF ftt0105c; AcrB/AcrD/AcrF family transporter complement(109223..112336) Francisella tularensis subsp. tularensis FSC198 4200539 YP_666307.1 CDS FTF0106c NC_008245.1 112336 113709 R Similar to Q83CM0 Efflux transporter, RND family,MFP subunit from Coxiella burnetti (380 aa). FASTA: opt: 732 Z-score: 824.0 E(): 5.2e-38 Smith-Waterman score: 781; 34.748identity in 377 aa overlap ORF ftt0106c; RND efflux transporter complement(112336..113709) Francisella tularensis subsp. tularensis FSC198 4200540 YP_666308.1 CDS dsbB NC_008245.1 113722 114213 R Similar to DSBB_NEIMB (Q9JYC6) Disulfide bond formation protein B (disuphide oxidoreductase) from Neisseria meningitidis (162 aa). FASTA: opt: 171 Z-score: 223.1 E(): 0.00014 Smith-Waterman score: 171; 27.344 identity in 128 aa overlap; disulfide bond formation protein complement(113722..114213) Francisella tularensis subsp. tularensis FSC198 4199360 YP_666309.1 CDS cca NC_008245.1 114253 115335 R catalyzes the addition and repair of the 3'-terminal CCA sequence in tRNA; these proteins belong to the CCA-adding enzyme subfamily 2 which does not have phosphohydrolase activity; tRNA CCA-pyrophosphorylase complement(114253..115335) Francisella tularensis subsp. tularensis FSC198 4200318 YP_666310.1 CDS msbA NC_008245.1 115440 117269 D lipid A transport protein, ABC transporter,ATP-binding and membrane protein. Similar to Q47908 ValA from Francisella novicida strain U112 (572 aa). FASTA: opt: 3334 Z-score: 3684.8 E(): 2.4e-197 Smith-Waterman score: 3334; 97.810 identity in 548 aa overlap (54-601:13-559). Similar to MSBA_HAEIN (P44407) Lipid A export ATP-binding protein from Haemophilus influenzae (587 aa). FASTA: opt: 1570 Z-score: 1735.1 E(): 9.4e-89 Smith-Waterman score: 1570; 41.913identity in 575 aa overlap.; lipid A transport protein ABC transporter ATP-binding protein/permease 115440..117269 Francisella tularensis subsp. tularensis FSC198 4199856 YP_666311.1 CDS lpxK NC_008245.1 117275 118243 D transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase 117275..118243 Francisella tularensis subsp. tularensis FSC198 4199650 YP_666312.1 CDS polA NC_008245.1 118339 121032 D Similar to AAO91288 (Q83AT5) DNA polymerase I from Coxiella burnetii (895 aa). FASTA: opt: 2961 Z-score: 3329.8 E(): 1.4e-177 Smith-Waterman score: 2961; 52.058 identity in 899 aa overlap; DNA polymerase I 118339..121032 Francisella tularensis subsp. tularensis FSC198 4199736 YP_666313.1 CDS FTF0112 NC_008245.1 121052 121828 D type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase 121052..121828 Francisella tularensis subsp. tularensis FSC198 4200541 YP_666314.1 CDS deoB NC_008245.1 121833 123077 D catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose; phosphopentomutase 121833..123077 Francisella tularensis subsp. tularensis FSC198 4199344 YP_666315.1 CDS deoC NC_008245.1 123040 123801 D Similar to AAP95774 (Q7VMS9) Deoxyribose-phosphate aldolase from Haemophilus ducreyi (258 aa). FASTA: opt: 632 Z-score: 764.1 E(): 1.1e-34 Smith-Waterman score: 632; 42.857 identity in 245 aa overlap; deoxyribose-phosphate aldolase 123040..123801 Francisella tularensis subsp. tularensis FSC198 4199345 YP_666316.1 CDS nupC1 NC_008245.1 123791 124990 D Similar to AAP07626 (Q81I17) Nucleoside permease nupC from Bacillus cereus (392 aa). FASTA: opt: 1236 Z-score: 1430.7 E(): 7.7e-72 Smith-Waterman score: 1236; 49.246 identity in 398 aa overlap Paralog of FTF0116; nucleoside permease NUP family protein 123791..124990 Francisella tularensis subsp. tularensis FSC198 4200754 YP_666317.1 CDS nupC1 NC_008245.1 125009 126211 D Similar to (AAP07626) Q81I17 Nucleoside permease nupC from Bacillus cereus (392 aa). FASTA: opt: 1351 Z-score: 1549.9 E(): 1.9e-78 Smith-Waterman score: 1351; 52.381 identity in 399 aa overlap Paralog of FTF0115; nucleoside permease NUP family protein 125009..126211 Francisella tularensis subsp. tularensis FSC198 4200755 YP_666318.1 CDS tmk NC_008245.1 126224 126853 D catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 126224..126853 Francisella tularensis subsp. tularensis FSC198 4200756 YP_666319.1 CDS prfC NC_008245.1 126915 128492 D stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3 126915..128492 Francisella tularensis subsp. tularensis FSC198 4199939 YP_666320.1 CDS FTF0119 NC_008245.1 128567 129883 D ORF ftt0119; hypothetical protein 128567..129883 Francisella tularensis subsp. tularensis FSC198 4200542 YP_666321.1 CDS ftsY NC_008245.1 129880 130911 D Similar to Q9I6C1 Signal recognition particle receptor FtsY from Pseudomonas aeruginosa (455 aa). FASTA: opt: 1262 Z-score: 1403.4 E(): 2.8e-70 Smith-Waterman score: 1262; 61.935identity in 310 aa overlap; signal recognition particle receptor FtsY 129880..130911 Francisella tularensis subsp. tularensis FSC198 4199198 YP_666322.1 CDS uvrD NC_008245.1 131002 133224 D Similar to Q88C31 DNA helicase II from Pseudomonas putida (728 aa). FASTA: opt: 1880 Z-score: 2129.9 E(): 9.6e-111 Smith-Waterman score: 2083; 45.867 identity in 750 aa overlap; DNA helicase II 131002..133224 Francisella tularensis subsp. tularensis FSC198 4200136 YP_666323.1 CDS oppD NC_008245.1 136649 137617 D Similar to Q8D8A2 Oligopeptide ABC transporter,ATP-binding protein D from Vibrio vulnificus (324 aa). FASTA: opt: 1202 Z-score: 1353.8 E(): 1.6e-67 Smith-Waterman score: 1202; 56.270 identity in 311 aa overlap; oligopeptide transporter, subunit D, ABC transporter ATP-binding protein 136649..137617 Francisella tularensis subsp. tularensis FSC198 4200084 YP_666324.1 CDS oppF NC_008245.1 137618 138592 D Similar to OPPF_HAEIN (P45051) Oligopeptide transport ATP-binding oppF from Haemophilus influenzae (332 aa). FASTA: opt: 1227 Z-score: 1398.5 E(): 5.3e-70 Smith-Waterman score: 1227; 56.790 identity in 324 aa overlap; oligopeptide transporter, subunit F, ABC transporter ATP-binding protein 137618..138592 Francisella tularensis subsp. tularensis FSC198 4200085 YP_666325.1 CDS FTF0127c NC_008245.1 138596 139798 R Similar to Q83CF6 Major facilitator family transporter from Coxiella burnetii (443 aa). FASTA: opt: 488 Z-score: 542.0 E(): 2.7e-22 Smith-Waterman score: 490; 27.621identity in 391 aa overlap ORF ftt0127c; major facilitator transporter complement(138596..139798) Francisella tularensis subsp. tularensis FSC198 4200543 YP_666326.1 CDS FTF0128 NC_008245.1 139932 140513 D ORF ftt0128; hypothetical protein 139932..140513 Francisella tularensis subsp. tularensis FSC198 4200544 YP_666327.1 CDS FTF0129 NC_008245.1 140657 141925 D Similar to Q83BM0 (Q83BM0) Major facilitator family transporter from Coxiella burnetii (428 aa). FASTA: opt: 497 Z-score: 533.3 E(): 8.2e-22 Smith-Waterman score: 529; 26.355 identity in 406 aa overlap ORF ftt0129; major facilitator transporter 140657..141925 Francisella tularensis subsp. tularensis FSC198 4200545 YP_666328.1 CDS glpK NC_008245.1 141982 143490 D Similar to GLPK_THETN (Q8R8J4) Glycerol kinase from Thermoanaerobacter tengcongensis (497 aa). FASTA: opt: 2233 Z-score: 2691.0 E(): 5.3e-142 Smith-Waterman score: 2233; 66.333 identity in 499 aa overlap. This CDS is disrupted by the insertion of an ISFtu1 element occurring very near the C-terminal end. It is not clear whether this insertion affects the function of the protein; glycerol kinase 141982..143490 Francisella tularensis subsp. tularensis FSC198 4199796 YP_666329.1 CDS isftu1 NC_008245.1 143583 144367 R ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and also mariner elements, show that this transposase shares strongly conserved residues, including a fully conserved dipeptide,Asp-Glu (DE), and a block consisting of a fully conserved Asp and highly conserved Glu, separated by 34 or 35 residues (D35E). The conserved dipeptide is only present if ribosomal frameshifting occurs.; transposase complement(join(143583..144041,144041..144367)) Francisella tularensis subsp. tularensis FSC198 4199617 YP_666330.1 CDS glpA NC_008245.1 144683 146215 D Similar to O51259 Glycerol-3-phosphate dehydrogenase, anaerobic, from Borrelia burgdorferii (527 aa). FASTA: opt: 1330 Z-score: 1506.9 E(): 4.8e-76 Smith-Waterman score: 1330; 43.333 identity in 510 aa overlap; anaerobic glycerol-3-phosphate dehydrogenase 144683..146215 Francisella tularensis subsp. tularensis FSC198 4199793 YP_666331.1 CDS glpF NC_008245.1 146225 146989 D Similar to CAD75967 (Q7UMF0) Probable glycerol uptake facilitator protein from Rhodopirelulla baltica (271 aa). FASTA: opt: 796 Z-score: 888.1 E(): 1.4e-41 Smith-Waterman score: 796; 50.209 identity in 239 aa overlap; glycerol uptake facilitator protein 146225..146989 Francisella tularensis subsp. tularensis FSC198 4199795 YP_666332.1 CDS FTF0134 NC_008245.1 146993 147706 D ORF ftt0134; hypothetical protein 146993..147706 Francisella tularensis subsp. tularensis FSC198 4200546 YP_666333.1 CDS FTF0136 NC_008245.1 148181 149596 D Similar to AAQ00172 (Q7VBG7) DNA helicase related to phage enzyme from Prochlorococcus marinus (479 aa) FASTA: opt: 386 Z-score: 446.1 E(): 5.9e-17 Smith-Waterman score: 386; 26.681 identity in 476 aa overlap ORF ftt0136; helicase 148181..149596 Francisella tularensis subsp. tularensis FSC198 4200548 YP_666334.1 CDS tufA NC_008245.1 150061 151245 D EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 150061..151245 Francisella tularensis subsp. tularensis FSC198 4198974 YP_666335.1 CDS secE NC_008245.1 151437 151907 D forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 151437..151907 Francisella tularensis subsp. tularensis FSC198 4200737 YP_666336.1 CDS nusG NC_008245.1 151923 152456 D Similar to NUSG_VIBVU (Q8DD25) Transcription antitermination protein nusG from Vibrio vulnificus (181 aa). FASTA: opt: 687 Z-score: 868.9 E(): 1.7e-40 Smith-Waterman score: 687; 58.621 identity in 174 aa overlap; transcription antitermination protein nusG 151923..152456 Francisella tularensis subsp. tularensis FSC198 4200759 YP_666337.1 CDS rplK NC_008245.1 152525 152959 D binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 152525..152959 Francisella tularensis subsp. tularensis FSC198 4200781 YP_666338.1 CDS rplA NC_008245.1 152962 153657 D in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 152962..153657 Francisella tularensis subsp. tularensis FSC198 4200773 YP_666339.1 CDS rplJ NC_008245.1 153827 154345 D binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 153827..154345 Francisella tularensis subsp. tularensis FSC198 4200780 YP_666340.1 CDS rplL NC_008245.1 154408 154785 D present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 154408..154785 Francisella tularensis subsp. tularensis FSC198 4200782 YP_666341.1 CDS rpoB NC_008245.1 154939 159015 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 154939..159015 Francisella tularensis subsp. tularensis FSC198 4200328 YP_666342.1 CDS rpoC NC_008245.1 159077 163330 D Similar to Q9AAU1 (Q9AAU1) DNA-directed RNA polymerase, beta subunit from Caulobacter crescentus (1396 aa). FASTA: opt: 5089 Z-score: 5550.7 E(): 0 Smith-Waterman score: 5089; 56.626identity in 1381 aa overlap; DNA-directed RNA polymerase subunit beta 159077..163330 Francisella tularensis subsp. tularensis FSC198 4200329 YP_666343.1 CDS FTF0146 NC_008245.1 163433 163669 D ORF ftt0146; hypothetical protein 163433..163669 Francisella tularensis subsp. tularensis FSC198 4200549 YP_666344.1 CDS gcp NC_008245.1 163669 164679 D in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; putative DNA-binding/iron metalloprotein/AP endonuclease 163669..164679 Francisella tularensis subsp. tularensis FSC198 4199276 YP_666345.1 CDS FTF0148 NC_008245.1 164793 165959 D Similar to Q27437 Stearoyl-CoA desaturase from Amblyomma americanum (317 aa). FASTA: opt: 653 Z-score: 747.5 E(): 9.6e-34 Smith-Waterman score: 653; 36.897 identity in 290 aa overlap ORF ftt0148; fatty acid desaturase 164793..165959 Francisella tularensis subsp. tularensis FSC198 4200550 YP_666346.1 CDS metK NC_008245.1 166171 167331 R catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase complement(166171..167331) Francisella tularensis subsp. tularensis FSC198 4199839 YP_666347.1 CDS rpsP NC_008245.1 167625 167873 D binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 167625..167873 Francisella tularensis subsp. tularensis FSC198 4198954 YP_666348.1 CDS rimM NC_008245.1 167916 168425 D Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 167916..168425 Francisella tularensis subsp. tularensis FSC198 4199220 YP_666349.1 CDS trmD NC_008245.1 168822 169586 D methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 168822..169586 Francisella tularensis subsp. tularensis FSC198 4199863 YP_666350.1 CDS rplS NC_008245.1 169586 169933 D this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 169586..169933 Francisella tularensis subsp. tularensis FSC198 4198995 YP_666351.1 CDS xerD NC_008245.1 170099 170977 D Similar to Q7ZAJ8 (Q7ZAJ8) Integrase/recombinase XerD from Shewanella oneidensis (300 aa). FASTA: opt: 1039 Z-score: 1285.0 E(): 1.1e-63 Smith-Waterman score: 1039; 52.414 identity in 290 aa overlap; integrase/recombinase 170099..170977 Francisella tularensis subsp. tularensis FSC198 4200694 YP_666352.1 CDS FTF0155 NC_008245.1 171094 171945 D Similar to Q87HU0 Putative oxidoreductase iron/ascorbate from Vibrio parahaemolyticus (279 aa). FASTA: opt: 944 Z-score: 1155.0 E(): 1.9e-56 Smith-Waterman score: 944; 49.110 identity in 281 aa overlap ORF ftt0155; oxidoreductase iron/ascorbate family protein 171094..171945 Francisella tularensis subsp. tularensis FSC198 4200551 YP_666353.1 CDS FTF0156 NC_008245.1 171950 172534 D Similar to Q83EI5 Acid phosphatase, class B from Coxiella burnetti (221 aa). FASTA: opt: 326 Z-score: 430.9 E(): 4.1e-16 Smith-Waterman score: 326; 32.642identity in 193 aa overlap ORF ftt0156; acid phosphatase 171950..172534 Francisella tularensis subsp. tularensis FSC198 4200630 YP_666354.1 CDS FTF0157c NC_008245.1 172531 173415 R Similar to Q8XMR0 Probable lic-1 operon protein from Clostridium perfringens (322 aa). FASTA: opt: 370 Z-score: 410.4 E(): 5.7e-15 Smith-Waterman score: 396; 30.492 identity in 305 aa overlap ORF ftt0157c; licB-like transmembrane protein complement(172531..173415) Francisella tularensis subsp. tularensis FSC198 4200631 YP_666355.1 CDS FTF0158c NC_008245.1 173547 174155 R ORF ftt0158c; hypothetical protein complement(173547..174155) Francisella tularensis subsp. tularensis FSC198 4200632 YP_666356.1 CDS FTF0159c NC_008245.1 174232 175053 R ORF ftt0159c; hypothetical protein complement(174232..175053) Francisella tularensis subsp. tularensis FSC198 4200633 YP_666357.1 CDS nudH NC_008245.1 175216 175683 D hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 175216..175683 Francisella tularensis subsp. tularensis FSC198 4200244 YP_666358.1 CDS FTF0161c NC_008245.1 175693 176319 R Similar to Q8FXE8 PAP2 family protein from Brucella suis (325 aa). FASTA: opt: 314 Z-score: 375.8 E(): 4.8e-13 Smith-Waterman score: 314; 31.915identity in 188 aa overlap ORF ftt0161c; PAP2 family protein complement(175693..176319) Francisella tularensis subsp. tularensis FSC198 4200634 YP_666359.1 CDS ampD NC_008245.1 176393 176917 D Similar to Q88PQ9 N-acetyl-anhydromuramyl-L-alanine amidase ampD from Pseudomonas putida (190 aa). FASTA: opt: 623 Z-score: 809.4 E(): 3.4e-37 Smith-Waterman score: 623; 52.000 identity in 175 aa overlap; N-acetyl-anhydromuranmyl-L-alanine amidase 176393..176917 Francisella tularensis subsp. tularensis FSC198 4199421 YP_666360.1 CDS parE NC_008245.1 176975 178858 R decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B complement(176975..178858) Francisella tularensis subsp. tularensis FSC198 4200096 YP_666361.1 CDS FTF0164c NC_008245.1 178948 180129 R Similar to Q9KRK6 Multidrug resistance protein from Vibrio cholerae (401 aa). FASTA: opt: 579 Z-score: 614.0 E(): 2.6e-26 Smith-Waterman score: 579; 28.989identity in 376 aa overlap ORF ftt0164c; eflux protein complement(178948..180129) Francisella tularensis subsp. tularensis FSC198 4200635 YP_666362.1 CDS FTF0165c NC_008245.1 180129 181499 R Similar to Q88PJ4 Conserved hypothetical protein from Pseudomonas putida (380 aa). FASTA: opt: 644 Z-score: 755.3 E(): 3.5e-34 Smith-Waterman score: 646; 29.268 identity in 369 aa overlap ORF ftt0165c; lipoprotein complement(180129..181499) Francisella tularensis subsp. tularensis FSC198 4200636 YP_666363.1 CDS FTF0166c NC_008245.1 181502 182158 R Similar to Q8FF57 Hypothetical protein yfgM from E. coli (206 aa). FASTA: opt: 155 Z-score: 188.7 E(): 0.012 Smith-Waterman score: 188; 27.778 identity in 198 aa overlap ORF ftt0166c; hypothetical protein complement(181502..182158) Francisella tularensis subsp. tularensis FSC198 4200637 YP_666364.1 CDS hemA NC_008245.1 182339 183589 D catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 182339..183589 Francisella tularensis subsp. tularensis FSC198 4200370 YP_666365.1 CDS prfA NC_008245.1 183590 184675 D recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 183590..184675 Francisella tularensis subsp. tularensis FSC198 4199937 YP_666366.1 CDS FTF0169 NC_008245.1 184668 185522 D ORF ftt0169; hemK protein 184668..185522 Francisella tularensis subsp. tularensis FSC198 4200638 YP_666367.1 CDS isftu1 NC_008245.1 186007 186791 D ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and also mariner elements, show that this transposase shares strongly conserved residues, including a fully conserved dipeptide,Asp-Glu (DE), and a block consisting of a fully conserved Asp and highly conserved Glu, separated by 34 or 35 residues (D35E). The conserved dipeptide is only present if ribosomal frameshifting occurs.; transposase join(186007..186333,186333..186791) Francisella tularensis subsp. tularensis FSC198 4199618 YP_666368.1 CDS FTF0174 NC_008245.1 188232 188801 D Similar to Q83A22 Hypothetical protein from Coxiella burnetti (192 aa). FASTA: opt: 440 Z-score: 543.8 E(): 2.1e-22 Smith-Waterman score: 440; 37.634 identity in 186 aa overlap ORF ftt0174; YggT family protein 188232..188801 Francisella tularensis subsp. tularensis FSC198 4200642 YP_666369.1 CDS FTF0175c NC_008245.1 188795 189577 R Similar to AAO80856 (Q836Q5) ABC transporter,ATP-binding protein (269 aa). FASTA: opt: 738 Z-score: 809.5 E(): 3.1e-37 Smith-Waterman score: 738; 43.137 identity in 255 aa overlap missing 90 aa at C-terminus ORF ftt0175c; ABC transporter ATP-binding protein complement(188795..189577) Francisella tularensis subsp. tularensis FSC198 4200643 YP_666370.1 CDS FTF0177c NC_008245.1 191761 192186 R Similar to Q88IP2 Acetyltransferase, GNAT family from Pseudomonas putida (364 aa). FASTA: opt: 250 Z-score: 324.7 E(): 3.1e-10 Smith-Waterman score: 250; 34.559 identity in 136 aa overlap ORF ftt0177c; acetyltransferase complement(191761..192186) Francisella tularensis subsp. tularensis FSC198 4200645 YP_666371.1 CDS rimK NC_008245.1 192173 193642 R Similar to Q9KPN3 Ribosomal protein S6 modification protein-related protein from Vibrio cholerae (483 aa). FASTA: opt: 1367 Z-score: 1648.7 E(): 6.1e-84 Smith-Waterman score: 1367; 43.149 identity in 489 aa overlap; 30S ribosomal protein S6 complement(192173..193642) Francisella tularensis subsp. tularensis FSC198 4199219 YP_666372.1 CDS FTF0180 NC_008245.1 195923 196813 D Similar to Q8DDF5 1-acyl-sn-glycerol-3-phosphate acyltransferase from Vibrio vulnificus (271 aa). FASTA: opt: 749 Z-score: 902.5 E(): 2e-42 Smith-Waterman score: 749; 40.370 identity in 270 aa overlap ORF ftt0180; putative acyltransferase 195923..196813 Francisella tularensis subsp. tularensis FSC198 4200647 YP_666373.1 CDS FTF0181c NC_008245.1 197210 197746 R Similar to Q9X885 Putative small integral membrane protein from Streptomyces coelicolor (167 aa). FASTA: opt: 262 Z-score: 342.1 E(): 3.6e-11 Smith-Waterman score: 262; 30.723 identity in 166 aa overlap ORF ftt0181c; hypothetical protein complement(197210..197746) Francisella tularensis subsp. tularensis FSC198 4200783 YP_666374.1 CDS FTF0182c NC_008245.1 197844 198386 R Similar to Q8D257 YrdC protein from Wigglesworthia glossinidia (194 aa). FASTA: opt: 374 Z-score: 473.0 E(): 1.9e-18 Smith-Waterman score: 374; 39.130 identity in 184 aa overlap ORF ftt0182c; Sua5/YciO/YrdC family protein complement(197844..198386) Francisella tularensis subsp. tularensis FSC198 4200784 YP_666375.1 CDS rpsA NC_008245.1 198503 200173 R in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 complement(198503..200173) Francisella tularensis subsp. tularensis FSC198 4200333 YP_666376.1 CDS FTF0184 NC_008245.1 200321 200782 D Similar to Q83DS3 Zinc-binding domain protein from Coxiella burnetii (142 aa). FASTA: opt: 473 Z-score: 642.4 E(): 6.8e-28 Smith-Waterman score: 473; 52.817 identity in 142 aa overlap ORF ftt0184; zinc-binding domain-containing protein 200321..200782 Francisella tularensis subsp. tularensis FSC198 4200785 YP_666377.1 CDS ddlB NC_008245.1 200786 201676 D D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanyl-alanine synthetase A 200786..201676 Francisella tularensis subsp. tularensis FSC198 4199530 YP_666378.1 CDS ftsQ NC_008245.1 201673 202356 D Similar to Q83F15 Cell division protein FtsQ from Coxiella burnetii (243 aa). FASTA: opt: 291 Z-score: 355.4 E(): 6.6e-12 Smith-Waterman score: 291; 23.176 identity in 233 aa overlap; cell division protein FtsQ 201673..202356 Francisella tularensis subsp. tularensis FSC198 4199196 YP_666379.1 CDS ftsA NC_008245.1 202458 203720 D Similar to Q87WY9 Cell division protein FtsA from Pseuodomonas syringae (418 aa). FASTA: opt: 992 Z-score: 1194.6 E(): 1.2e-58 Smith-Waterman score: 992; 37.621 identity in 412 aa overlap; cell division protein FtsA 202458..203720 Francisella tularensis subsp. tularensis FSC198 4199192 YP_666380.1 CDS ftsZ NC_008245.1 203764 204909 D GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 203764..204909 Francisella tularensis subsp. tularensis FSC198 4199199 YP_666381.1 CDS lpxC NC_008245.1 204932 205792 D zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 204932..205792 Francisella tularensis subsp. tularensis FSC198 4199571 YP_666382.1 CDS dnaX NC_008245.1 205806 207446 R Similar to Q8DB24 DNA polymerase III, gamma/tau subunits from Vibrio vulnificus (734 aa). FASTA: opt: 1193 Z-score: 1334.5 E(): 1.9e-66 Smith-Waterman score: 1193; 44.893 identity in 421 aa overlap; DNA polymerase III subunit gamma and tau complement(205806..207446) Francisella tularensis subsp. tularensis FSC198 4199359 YP_666383.1 CDS prfB NC_008245.1 207719 208696 D Similar to RF2_HAEIN (P43918) Peptide chain release factor 2 from Haemophilus influenzae (365 aa). FASTA: opt: 1542 Z-score: 1839.9 E(): 1.4e-94 Smith-Waterman score: 1542; 68.405 identity in 326 aa overlap; peptide chain release factor 2 207719..208696 Francisella tularensis subsp. tularensis FSC198 4199938 YP_666384.1 CDS lysU NC_008245.1 208829 210559 D Similar to SYK2_ECOLI (P14825) Lysyl-tRNA synthetase, heat inducible, from E. coli (504 aa). FASTA: opt: 2003 Z-score: 2242.9 E(): 4.9e-117 Smith-Waterman score: 2003; 61.066 identity in 488 aa overlap; lysyl-tRNA synthetase 208829..210559 Francisella tularensis subsp. tularensis FSC198 4199655 YP_666385.1 CDS FTF0193c NC_008245.1 210944 211486 R Similar to Y208_VIBCH (Q9KVD8) Hypothetical protein VC0208 from Vibrio cholerae (162 aa). FASTA: opt: 414 Z-score: 528.5 E(): 1.5e-21 Smith-Waterman score: 414; 41.875 identity in 160 aa overlap ORF ftt0193c; hypothetical protein complement(210944..211486) Francisella tularensis subsp. tularensis FSC198 4200786 YP_666386.1 CDS FTF0194c NC_008245.1 211585 212457 R Similar to Q8X898 Hypothetical 31.1 kDa protein (Hypothetical membrane protein) from E.coli (274 aa). FASTA: opt: 398 Z-score: 431.1 E(): 4e-16 Smith-Waterman score: 398; 26.429 identity in 280 aa overlap ORF ftt0194c; hypothetical protein complement(211585..212457) Francisella tularensis subsp. tularensis FSC198 4200787 YP_666387.1 CDS FTF0195c NC_008245.1 212466 214007 R Similar to Q8IX91 L-glutaminase from Homo sapien (602 aa). FASTA: opt: 1441 Z-score: 1670.0 E(): 3.9e-85 Smith-Waterman score: 1441; 42.887 identity in 478 aa overlap ORF ftt0195c; L-glutaminase complement(212466..214007) Francisella tularensis subsp. tularensis FSC198 4200788 YP_666388.1 CDS glnA NC_008245.1 214089 215126 R Similar to AAO90051 (Q83E31) Glutamine synthetase from Coxiella burnetti (359 aa). FASTA: opt: 1369 Z-score: 1705.1 E(): 4.4e-87 Smith-Waterman score: 1369; 59.226 identity in 336 aa overlap; glutamine synthetase complement(214089..215126) Francisella tularensis subsp. tularensis FSC198 4199789 YP_666389.1 CDS holA NC_008245.1 215246 216223 R Similar to Q88DM9 DNA polymerase III, delta subunit from Pseudomonas putida (345 aa). FASTA: opt: 380 Z-score: 451.8 E(): 2.8e-17 Smith-Waterman score: 380; 28.707 identity in 317 aa overlap; DNA polymerase III subunit delta complement(215246..216223) Francisella tularensis subsp. tularensis FSC198 4200197 YP_666390.1 CDS blc NC_008245.1 216351 216827 D Similar to Q8EGB4 Lipoprotein Blc from Shewenella oneidensis (177 aa). FASTA: opt: 620 Z-score: 813.1 E(): 2.1e-37 Smith-Waterman score: 620; 56.604 identity in 159 aa overlap; outer membrane lipoprotein 216351..216827 Francisella tularensis subsp. tularensis FSC198 4200311 YP_666391.1 CDS FTF0199 NC_008245.1 216991 217824 D ORF ftt0199; hypothetical protein 216991..217824 Francisella tularensis subsp. tularensis FSC198 4200789 YP_666392.1 CDS FTF0200 NC_008245.1 217772 218389 D ORF ftt0200; hypothetical protein 217772..218389 Francisella tularensis subsp. tularensis FSC198 4200790 YP_666393.1 CDS isftu2 NC_008245.1 218963 219706 R ISFtu2. Transposase, member of the IS5 family. Identical to Q8GM03 putative transposase from Francisella tularensis (247 aa).; transposase complement(218963..219706) Francisella tularensis subsp. tularensis FSC198 4200190 YP_666394.1 CDS purH NC_008245.1 220957 222504 R involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase complement(220957..222504) Francisella tularensis subsp. tularensis FSC198 4199119 YP_666395.1 CDS purA NC_008245.1 222681 223967 D catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 222681..223967 Francisella tularensis subsp. tularensis FSC198 4199951 YP_666396.1 CDS hpt NC_008245.1 223971 224504 D Similar to Q8R7L0 Hypoxanthine-guanine phosphoribosyltransferase from Thermoanaerobacter tengcogenesis (181 aa). FASTA: opt: 509 Z-score: 658.7 E(): 8.5e-29 Smith-Waterman score: 509; 47.337 identity in 169 aa overlap; hypoxanthine-guanine phosphoribosyltransferase 223971..224504 Francisella tularensis subsp. tularensis FSC198 4200200 YP_666397.1 CDS FTF0207c NC_008245.1 225339 226181 R Similar to Q8G5L3 Possible permease of ABC transporter system from Bifidobacterium longum (277 aa). FASTA: opt: 582 Z-score: 622.6 E(): 8.7e-27 Smith-Waterman score: 582; 38.372identity in 258 aa overlap ORF ftt0207c; ABC transporter permease complement(225339..226181) Francisella tularensis subsp. tularensis FSC198 4200793 YP_666398.1 CDS FTF0208c NC_008245.1 226123 226800 R Similar to MNTB_BACSU (O34338) Manganese transport system ATP-binding protein mntB from Bacillus subtilis (250 aa). FASTA: opt: 365 Z-score: 426.7 E(): 7.1e-16 Smith-Waterman score: 365; 30.986 identity in 213 aa overlap ORF ftt0208c; ABC transporter ATP-binding protein complement(226123..226800) Francisella tularensis subsp. tularensis FSC198 4200794 YP_666399.1 CDS FTF0209c NC_008245.1 226802 227719 R Similar to Q88TE8 ABC transporter substrate binding protein from Lactobacillus plantarum (297 aa). FASTA: opt: 555 Z-score: 628.8 E(): 3.9e-27 Smith-Waterman score: 555; 30.935identity in 278 aa overlap ORF ftt0209c; periplasmic solute binding family protein complement(226802..227719) Francisella tularensis subsp. tularensis FSC198 4200795 YP_666400.1 CDS FTF0211c NC_008245.1 229135 229599 R Similar to Q9F6B1 Outer membrane lipoprotein Pcp from Edwardsiella tarda (155 aa). FASTA: opt: 294 Z-score: 329.0 E(): 2e-10 Smith-Waterman score: 294; 35.032 identity in 157 aa overlap ORF ftt0211c; outer membrane lipoprotein complement(229135..229599) Francisella tularensis subsp. tularensis FSC198 4200797 YP_666401.1 CDS wrbA NC_008245.1 229610 230206 R Similar to Q9I509 Trp repressor binding protein WrbA from Pseudomonas aeruginosa (198 aa). FASTA: opt: 727 Z-score: 948.0 E(): 6.5e-45 Smith-Waterman score: 727; 54.974 identity in 191 aa overlap; trp repressor binding protein complement(229610..230206) Francisella tularensis subsp. tularensis FSC198 4200688 YP_666402.1 CDS rbn NC_008245.1 230213 231400 D Similar to RBN_ECOLI (P32146) tRNA processing ribonuclease BN from E. coli (290 aa). FASTA: opt: 535 Z-score: 578.5 E(): 2.5e-24 Smith-Waterman score: 535; 33.813 identity in 278 aa overlap; tRNA processing ribonuclease BN 230213..231400 Francisella tularensis subsp. tularensis FSC198 4200597 YP_666403.1 CDS FTF0214 NC_008245.1 231419 231976 D Similar to Q9I2E6 Probable transporter from Pseudomonas aeruginosa (191 aa). FASTA: Q8PGT5 PnuC protein from Xanthomonas axonopodois (191 aa). FASTA: opt: 216 Z-score: 281.0 E(): 8.5e-08 Smith-Waterman score: 216; 27.072 identity in 181 aa overlap. Contains a frameshift in Schu S4 but intact in FSC 198; transporter 231419..231976 Francisella tularensis subsp. tularensis FSC198 4200798 YP_666404.1 CDS priA NC_008245.1 231990 234143 D Similar to Q9KNQ3 Primosomal protein N` from Vibrio cholerae (734 aa). FASTA: opt: 1587 Z-score: 1770.8 E(): 9.7e-91 Smith-Waterman score: 1619; 37.823 identity in 735 aa overlap; primosomal protein N' 231990..234143 Francisella tularensis subsp. tularensis FSC198 4199940 YP_666405.1 CDS isftu1 NC_008245.1 234273 235057 D ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and also mariner elements, show that this transposase shares strongly conserved residues, including a fully conserved dipeptide,Asp-Glu (DE), and a block consisting of a fully conserved Asp and highly conserved Glu, separated by 34 or 35 residues (D35E). The conserved dipeptide is only present if ribosomal frameshifting occurs.; transposase join(234273..234599,234599..235057) Francisella tularensis subsp. tularensis FSC198 4199619 YP_666406.1 CDS FTF0219c NC_008245.1 235996 236991 R Similar to Q81FW2 Low-affinity inorganic phosphate transport protein from Bacillus cereus (332 aa). FASTA: opt: 932 Z-score: 1065.7 E(): 1.8e-51 Smith-Waterman score: 932; 42.470 identity in 332 aa overlap ORF ftt0219c; phosphate transport protein complement(235996..236991) Francisella tularensis subsp. tularensis FSC198 4200343 YP_666407.1 CDS FTF0220c NC_008245.1 237009 237665 R Similar to Q8XMV6 Hypothetical protein CPE0582 from Clostridium perfringens (210 aa). FASTA: opt: 207 Z-score: 248.6 E(): 5.9e-06 Smith-Waterman score: 207; 24.883 identity in 213 aa overlap ORF ftt0220c; hypothetical protein complement(237009..237665) Francisella tularensis subsp. tularensis FSC198 4200344 YP_666408.1 CDS acpA NC_008245.1 237902 239446 D acid phosphatase 237902..239446 Francisella tularensis subsp. tularensis FSC198 4199753 YP_666409.1 CDS ybgK NC_008245.1 239453 240229 R Similar to YBGK_HAEIN (P44298) Hypothetical protein HI1730 from Haemophilus influenzae (309 aa). FASTA: opt: 308 Z-score: 386.7 E(): 1.2e-13 Smith-Waterman score: 352; 32.453 identity in 265 aa overlap; hydrolase subunit complement(239453..240229) Francisella tularensis subsp. tularensis FSC198 4200702 YP_666410.1 CDS ybgL NC_008245.1 240271 240969 R Similar to Y993_PYRAB (Q9V005) Hypothetical UPF0271 protein PYRAB09930 from Pyrococcus abyssi (255 aa). FASTA: opt: 430 Z-score: 541.0 E(): 3e-22 Smith-Waterman score: 430; 35.294 identity in 238 aa overlap; LamB/YcsF family protein complement(240271..240969) Francisella tularensis subsp. tularensis FSC198 4200703 YP_666411.1 CDS isftu1 NC_008245.1 242754 243538 R ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and also mariner elements, show that this transposase shares strongly conserved residues, including a fully conserved dipeptide,Asp-Glu (DE), and a block consisting of a fully conserved Asp and highly conserved Glu, separated by 34 or 35 residues (D35E). The conserved dipeptide is only present if ribosomal frameshifting occurs.; transposase complement(join(242754..243212,243212..243538)) Francisella tularensis subsp. tularensis FSC198 4199620 YP_666412.1 CDS FTF0227c NC_008245.1 243562 243756 R ORF ftt0227c; hypothetical protein complement(243562..243756) Francisella tularensis subsp. tularensis FSC198 4200347 YP_666413.1 CDS orn NC_008245.1 243791 244327 R 3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease complement(243791..244327) Francisella tularensis subsp. tularensis FSC198 4200086 YP_666414.1 CDS efp NC_008245.1 244330 244899 R Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P complement(244330..244899) Francisella tularensis subsp. tularensis FSC198 4199670 YP_666415.1 CDS FTF0230c NC_008245.1 244939 245346 R Similar to Q87B50 Type IV pilin from Xylella fastidiosa (142 aa). FASTA: opt: 224 Z-score: 300.3 E(): 7.8e-09 Smith-Waterman score: 224; 32.090 identity in 134 aa overlap The pili fiber building block protein has a highly distinct primary structure; a short positively charged leader sequence, and a highly conserved and highly hydrophobic amino-terminal domain which forms the core of the pilus fiber; A variety of studies suggest that the invariant glycine (G) at -1 is required for prepilin cleavage and assembly and that the glutamate (E) at + 5 is essential for assembly and efficient N-terminal methylation but not cleavage. The region near the carboxy terminus is often hydrophilic and is stabilized by one or two disulfide bridges that may be involved in recognition of receptors. The genes with these characteristics are usually termed pilA, pilE, pilV, pilW, pilX and FimU. (Mattick John S.. 'Type IV Pili and twitching motility'. Annu. Rev. Microbiol. 2002. 56:289-314.) This protein has all the characteristics described above. ORF ftt0230c; Type IV pili fiber building block protein complement(244939..245346) Francisella tularensis subsp. tularensis FSC198 4200348 YP_666416.1 CDS htrB NC_008245.1 245359 246282 R Similar to HTRB_ECOLI (P24187) Lipid A biosynthesis lauroyl acyltransferase from E. coli (306 aa). FASTA: opt: 542 Z-score: 697.7 E(): 5.7e-31 Smith-Waterman score: 542; 32.895 identity in 304 aa overlap (8-307:14-306) n.b.Paralog of FTF0232c; acyltransferase complement(245359..246282) Francisella tularensis subsp. tularensis FSC198 4200649 YP_666417.1 CDS ddg NC_008245.1 246343 247242 R Similar to Q8ZNA3 (Q8ZNA3) Cold shock-induced palmitoleoyl transferase from Salmonella typhimurium (306 aa). FASTA: opt: 629 Z-score: 782.5 E(): 1.1e-35 Smith-Waterman score: 629; 36.755 identity in 302 aa overlap Paralog of FTF0231c; acyltransferase complement(246343..247242) Francisella tularensis subsp. tularensis FSC198 4199529 YP_666418.1 CDS yidC NC_008245.1 247249 248904 R Similar to 60IM_COXBU (P45650) 60 kDa inner-membrane protein homolog from Coxiella burnetti (566 aa). FASTA: opt: 1434 Z-score: 1537.8 E(): 8.4e-78 Smith-Waterman score: 1434; 41.815 identity in 562 aa overlap; inner-membrane protein complement(247249..248904) Francisella tularensis subsp. tularensis FSC198 4199108 YP_666419.1 CDS FTF0234c NC_008245.1 248913 249125 R Similar to Q8RHA5 Hypothetical protein FN0003 from Fusobacterium nucleatum (82 aa). FASTA: opt: 273 Z-score: 406.9 E(): 8.2e-15 Smith-Waterman score: 273; 53.623 identity in 69 aa overlap ORF ftt0234c; hypothetical protein complement(248913..249125) Francisella tularensis subsp. tularensis FSC198 4200349 YP_666420.1 CDS rnpA NC_008245.1 249137 249538 R Similar to RNPA_VIBCH (Q9KVY2) Ribonuclease P protein component from Vibrio cholerae (118 aa). FASTA: opt: 189 Z-score: 256.8 E(): 2.1e-06 Smith-Waterman score: 189; 35.870 identity in 92 aa overlap; ribonuclease P protein component complement(249137..249538) Francisella tularensis subsp. tularensis FSC198 4200768 YP_666421.1 CDS rpmH NC_008245.1 249480 249614 R in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 complement(249480..249614) Francisella tularensis subsp. tularensis FSC198 4199008 YP_666422.1 CDS FTF0237c NC_008245.1 249706 250164 R ORF ftt0237c; hypothetical protein complement(249706..250164) Francisella tularensis subsp. tularensis FSC198 4200350 YP_666423.1 CDS aroE1 NC_008245.1 250291 251064 D Similar to AROE_VIBVU (Q8DDD4) Shikimate 5-dehydrogenase from Vibrio vulnificus (277 aa). FASTA: opt: 567 Z-score: 672.1 E(): 1.5e-29 Smith-Waterman score: 567; 37.984 identity in 258 aa overlap; shikimate 5-dehydrogenase 250291..251064 Francisella tularensis subsp. tularensis FSC198 4199435 YP_666424.1 CDS murC NC_008245.1 251131 252486 D Similar to Q9F1M9 MurC from Shewanella violacae (494 aa). FASTA: opt: 1010 Z-score: 1212.3 E(): 1.2e-59 Smith-Waterman score: 1010; 36.761 identity in 457 aa overlap; UDP-N-acetylmuramate--L-alanine ligase 251131..252486 Francisella tularensis subsp. tularensis FSC198 4200106 YP_666425.1 CDS FTF0240 NC_008245.1 252479 253351 D Similar to Q87SH3 Conserved hypothetical protein from Vibrio parahaemolyticus (287 aa). FASTA: opt: 744 Z-score: 882.7 E(): 2.8e-41 Smith-Waterman score: 744; 46.996 identity in 283 aa overlap ORF ftt0240; tetrapyrrole methyltransferase family protein 252479..253351 Francisella tularensis subsp. tularensis FSC198 4200351 YP_666426.1 CDS FTF0241c NC_008245.1 253362 253832 R ORF ftt0241c; hypothetical protein complement(253362..253832) Francisella tularensis subsp. tularensis FSC198 4200352 YP_666427.1 CDS FTF0242 NC_008245.1 254172 254735 D Similar to Q83DS9 Hypothetical protein CBU0616 from Coxiella burnetii (196 aa). FASTA: opt: 376 Z-score: 484.1 E(): 4.5e-19 Smith-Waterman score: 376; 37.634 identity in 186 aa overlap ORF ftt0242; hypothetical protein 254172..254735 Francisella tularensis subsp. tularensis FSC198 4200353 YP_666428.1 CDS FTF0243 NC_008245.1 254808 255587 D weak similarity to M. musculus protein,1700056O17 Rik protein (233 aa) ORF ftt0243; hypothetical protein 254808..255587 Francisella tularensis subsp. tularensis FSC198 4200354 YP_666429.1 CDS FTF0244 NC_008245.1 255571 258312 D Similar to Q8R5Z3 DNA/RNA helicase (DEAD/DEAH box family) from Fusobacterium nucleatum (942 aa). FASTA: opt: 2318 Z-score: 2654.5 E(): 5.8e-140 Smith-Waterman score: 2473; 45.087 identity in 916 aa overlap ORF ftt0244; DNA/RNA helicase 255571..258312 Francisella tularensis subsp. tularensis FSC198 4200355 YP_666430.1 CDS usp NC_008245.1 258388 259224 D Similar to Q8PWX4 Universal stress protein from Methanosarcina maizae (323 aa). FASTA: opt: 347 Z-score: 418.2 E(): 2.1e-15 Smith-Waterman score: 347; 31.849 identity in 292 aa overlap; universal stress protein 258388..259224 Francisella tularensis subsp. tularensis FSC198 4198986 YP_666431.1 CDS isftu1 NC_008245.1 259584 260368 D ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and also mariner elements, show that this transposase shares strongly conserved residues, including a fully conserved dipeptide,Asp-Glu (DE), and a block consisting of a fully conserved Asp and highly conserved Glu, separated by 34 or 35 residues (D35E). The conserved dipeptide is only present if ribosomal frameshifting occurs.; transposase join(259584..259910,259910..260368) Francisella tularensis subsp. tularensis FSC198 4199621 YP_666432.1 CDS FTF0248 NC_008245.1 260538 260909 D ORF ftt0248; hypothetical protein 260538..260909 Francisella tularensis subsp. tularensis FSC198 4200357 YP_666433.1 CDS feoB NC_008245.1 261010 263253 D Similar to Q8ZJH5 Ferrous iron transport protein B from Yersinia pestis (771 aa). FASTA: opt: 1928 Z-score: 2034.7 E(): 1.9e-105 Smith-Waterman score: 2307; 45.396 identity in 771 aa overlap; ferrous iron transport protein 261010..263253 Francisella tularensis subsp. tularensis FSC198 4199409 YP_666434.1 CDS ppdK NC_008245.1 264065 266713 D catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase 264065..266713 Francisella tularensis subsp. tularensis FSC198 4199933 YP_666435.1 CDS ilvE NC_008245.1 267113 268000 D Similar to Q8Y1X0 Probable branched-chain amino acid aminotransferase protein from Ralstonia solanacearum (309 aa). FASTA: opt: 706 Z-score: 903.1 E(): 2.1e-42 Smith-Waterman score: 706; 39.931 identity in 288 aa overlap; branched-chain amino acid aminotransferase 267113..268000 Francisella tularensis subsp. tularensis FSC198 4200665 YP_666436.1 CDS leuA NC_008245.1 268011 269384 D Similar to Q9C5X5 2-isopropylmalate synthase from Arabidopsis thaliana (503 aa). FASTA: opt: 493 Z-score: 601.2 E(): 1.4e-25 Smith-Waterman score: 635; 31.373 identity in 408 aa overlap. This CDS is disrupted by the insertion of an ISFtu1 element occurring very near the C-terminal end. It is not clear whether this insertion affects the function of the protein; 2-isopropylmalate synthase 268011..269384 Francisella tularensis subsp. tularensis FSC198 4199513 YP_666437.1 CDS isftu1 NC_008245.1 269481 270265 R ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and also mariner elements, show that this transposase shares strongly conserved residues, including a fully conserved dipeptide,Asp-Glu (DE), and a block consisting of a fully conserved Asp and highly conserved Glu, separated by 34 or 35 residues (D35E). The conserved dipeptide is only present if ribosomal frameshifting occurs.; transposase complement(join(269481..269939,269939..270265)) Francisella tularensis subsp. tularensis FSC198 4199622 YP_666438.1 CDS FTF0254c NC_008245.1 270408 270779 R ORF ftt0254c; hypothetical protein complement(270408..270779) Francisella tularensis subsp. tularensis FSC198 4200358 YP_666439.1 CDS FTF0255c NC_008245.1 270772 271713 R ORF ftt0255c; hypothetical protein complement(270772..271713) Francisella tularensis subsp. tularensis FSC198 4200359 YP_666440.1 CDS FTF0256c NC_008245.1 272050 273018 R Similar to Q87T79 Putative lipopolysaccharide A protein from Vibrio parahaemolyticus (311 aa). FASTA: opt: 835 Z-score: 996.3 E(): 1.3e-47 Smith-Waterman score: 910; 43.671 identity in 316 aa overlap ORF ftt0256c; lipopolysaccharide protein complement(272050..273018) Francisella tularensis subsp. tularensis FSC198 4200360 YP_666441.1 CDS FTF0257 NC_008245.1 273207 275063 D Similar to Q8YNW1 Ribonuclease II family protein from Anabaena sp. (686 aa). FASTA: opt: 557 Z-score: 649.1 E(): 2.9e-28 Smith-Waterman score: 763; 28.290 identity in 661 aa overlap ORF ftt0257; ribonuclease II family protein 273207..275063 Francisella tularensis subsp. tularensis FSC198 4200361 YP_666442.1 CDS FTF0258 NC_008245.1 275394 276062 D Similar to Q83AC9 Carboxylesterase/phospholipase family protein from Coxiella burnetii (200 aa). FASTA: opt: 599 Z-score: 736.0 E(): 4.2e-33 Smith-Waterman score: 599; 45.813 identity in 203 aa overlap ORF ftt0258; carboxylesterase/phospholipase family protein 275394..276062 Francisella tularensis subsp. tularensis FSC198 4200362 YP_666443.1 CDS hemC NC_008245.1 276059 276961 D transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 276059..276961 Francisella tularensis subsp. tularensis FSC198 4200372 YP_666444.1 CDS crcB NC_008245.1 276962 277354 D may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 276962..277354 Francisella tularensis subsp. tularensis FSC198 4200275 YP_666445.1 CDS FTF0261 NC_008245.1 277351 277758 D The predicted signal peptide are in conflict with the membrane lipoprotein lipid attachment site ORF ftt0261; hypothetical protein 277351..277758 Francisella tularensis subsp. tularensis FSC198 4200401 YP_666446.1 CDS FTF0262 NC_008245.1 277898 278035 D The predicted signal peptide and the membrane lipoprotein lipid attachment site are in conflict with each other ORF ftt0262; lipoprotein 277898..278035 Francisella tularensis subsp. tularensis FSC198 4200402 YP_666447.1 CDS FTF0263 NC_008245.1 278088 278468 D ORF ftt0263; hypothetical protein 278088..278468 Francisella tularensis subsp. tularensis FSC198 4200403 YP_666448.1 CDS FTF0264c NC_008245.1 278465 278638 R Similar to Q8Y1X1 Hypothetical protein RSc0566 from Ralstonia solancearum (65 aa). FASTA: opt: 160 Z-score: 236.6 E(): 2.5e-05 Smith-Waterman score: 160; 50.000 identity in 36 aa overlap ORF ftt0264c; hypothetical protein complement(278465..278638) Francisella tularensis subsp. tularensis FSC198 4200404 YP_666449.1 CDS FTF0265 NC_008245.1 278767 280566 D Similar to Q83AV7 ABC transporter,permease protein from Coxiella burnetii (581 aa). FASTA: opt: 976 Z-score: 1115.9 E(): 2.9e-54 Smith-Waterman score: 1738; 45.318 identity in 598 aa overlap ORF ftt0265; ABC transporter membrane protein 278767..280566 Francisella tularensis subsp. tularensis FSC198 4200405 YP_666450.1 CDS FTF0266 NC_008245.1 280585 281901 D Similar to Q83AV8 ABC transporter, ATP-binding protein from Coxiella burnetii (432 aa). FASTA: opt: 1556 Z-score: 1713.5 E(): 1.5e-87 Smith-Waterman score: 1556; 54.673 identity in 428 aa overlap ORF ftt0266; ABC transporter ATP-binding protein 280585..281901 Francisella tularensis subsp. tularensis FSC198 4200406 YP_666451.1 CDS FTF0267 NC_008245.1 282026 283144 D ORF ftt0267; hypothetical protein 282026..283144 Francisella tularensis subsp. tularensis FSC198 4200407 YP_666452.1 CDS FTF0268 NC_008245.1 283238 285124 D Similar to Q88MV1 Sodium/hydrogen exchanger family protein from Pseudomonas putida (601 aa). FASTA: opt: 1318 Z-score: 1419.4 E(): 3.6e-71 Smith-Waterman score: 1318; 37.993 identity in 608 aa overlap ORF ftt0268; Sodium/hydrogen exchanger (antiporter) family protein 283238..285124 Francisella tularensis subsp. tularensis FSC198 4200408 YP_666453.1 CDS FTF0269 NC_008245.1 285109 285648 D Similar to Q8EKP8 Carbonic anhydrase,family 3 from Shewanella oneidensis (182 aa). FASTA: opt: 639 Z-score: 840.8 E(): 6.1e-39 Smith-Waterman score: 639; 50.000 identity in 178 aa overlap ORF ftt0269; carbonic anhydrase 285109..285648 Francisella tularensis subsp. tularensis FSC198 4200409 YP_666454.1 CDS lolB NC_008245.1 285599 286234 D Similar to Q83AQ2 Outer membrane lipoprotein LolB,putative from Coxiella burnetii (210 aa). FASTA: opt: 395 Z-score: 508.7 E(): 1.9e-20 Smith-Waterman score: 395; 33.668 identity in 199 aa overlap; lipoprotein releasing system, subunit B, outer membrane lipoprotein 285599..286234 Francisella tularensis subsp. tularensis FSC198 4199559 YP_666455.1 CDS ipk NC_008245.1 286222 287049 D An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 286222..287049 Francisella tularensis subsp. tularensis FSC198 4199301 YP_666456.1 CDS FTF0272 NC_008245.1 287238 287558 D ORF ftt0272; hypothetical protein 287238..287558 Francisella tularensis subsp. tularensis FSC198 4200410 YP_666457.1 CDS isftu1 NC_008245.1 287582 288366 D ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and also mariner elements, show that this transposase shares strongly conserved residues, including a fully conserved dipeptide,Asp-Glu (DE), and a block consisting of a fully conserved Asp and highly conserved Glu, separated by 34 or 35 residues (D35E). The conserved dipeptide is only present if ribosomal frameshifting occurs.; transposase join(287582..287908,287908..288366) Francisella tularensis subsp. tularensis FSC198 4199623 YP_666458.1 CDS FTF0274 NC_008245.1 288480 288698 D ORF ftt0274; hypothetical protein 288480..288698 Francisella tularensis subsp. tularensis FSC198 4200411 YP_666459.1 CDS FTF0277c NC_008245.1 290443 290541 R Similar to Q937K9 YbgT protein from Erwinia chrysanthemi (38 aa). FASTA: opt: 81 Z-score: 153.9 E(): 1 Smith-Waterman score: 81; 42.857 identity in 28 aa overlap ORF ftt0277c; hypothetical protein complement(290443..290541) Francisella tularensis subsp. tularensis FSC198 4200414 YP_666460.1 CDS cydB NC_008245.1 290557 291750 R Similar to AAO69749 (Q8XGM0) Cytochrome d ubiquinol oxidase subunit II from Salmonella typhi (379 aa). FASTA: opt: 645 Z-score: 711.2 E(): 1e-31 Smith-Waterman score: 1022; 40.506identity in 395 aa overlap; cytochrome d terminal oxidase, polypeptide subunit II complement(290557..291750) Francisella tularensis subsp. tularensis FSC198 4200283 YP_666461.1 CDS cydA NC_008245.1 291761 293539 R Similar to AAP96534 (Q7VKT6) Cytochrome D ubiquinol oxidase, subunit I from Haemophilus ducreyi (516 aa). FASTA: opt: 1311 Z-score: 1457.7 E(): 2.7e-73 Smith-Waterman score: 1688; 47.478identity in 575 aa overlap Schu S4 seems to have extra sequence in between 340-420 aa; cytochrome d terminal oxidase, polypeptide subunit I complement(291761..293539) Francisella tularensis subsp. tularensis FSC198 4200282 YP_666462.1 CDS yajR NC_008245.1 293968 295335 R Similar to AAO89830 (Q83EP3) Major facilitator family transporter from Coxiella burnetii (458 aa). FASTA: opt: 1379 Z-score: 1410.6 E(): 1.1e-70 Smith-Waterman score: 1379; 46.102 identity in 449 aa overlap; major facilitator transporter complement(293968..295335) Francisella tularensis subsp. tularensis FSC198 4200700 YP_666463.1 CDS cyoA NC_008245.1 295696 296598 D Similar to Q87DQ7 Cytochrome O ubiquinol oxidase subunit II from Xylella fastidiosa (319 aa). FASTA: opt: 956 Z-score: 1145.6 E(): 6.4e-56 Smith-Waterman score: 956; 49.477 identity in 287 aa overlap; cytochrome O ubiquinol oxidase subunit II 295696..296598 Francisella tularensis subsp. tularensis FSC198 4199516 YP_666464.1 CDS cyoB NC_008245.1 296637 298667 D Similar to AAO70008 (Q8XG02) Cytochrome o ubiquinol oxidase subunit I from Salmonella typhi (663 aa). FASTA: opt: 3045 Z-score: 3221.2 E(): 1.6e-171 Smith-Waterman score: 3045; 64.361identity in 665 aa overlap; cytochrome O ubiquinol oxidase subunit I 296637..298667 Francisella tularensis subsp. tularensis FSC198 4199517 YP_666465.1 CDS cyoC NC_008245.1 298664 299266 D Similar to Q87IH7 Cytochrome o ubiquinol oxidase,subunit III from Vibrio parahaemolyticus (200 aa). FASTA: opt: 768 Z-score: 931.9 E(): 5.1e-44 Smith-Waterman score: 768; 55.276identity in 199 aa overlap; cytochrome O ubiquinol oxidase, subunit III 298664..299266 Francisella tularensis subsp. tularensis FSC198 4199518 YP_666466.1 CDS cyoD NC_008245.1 299268 299600 D Similar to Q8ZC55 Cytochrome O ubiquinol oxidase subunit IV from Yersinia pestis (110 aa). FASTA: opt: 325 Z-score: 419.7 E(): 1.7e-15 Smith-Waterman score: 325; 50.505 identity in 99 aa overlap; cytochrome O ubiquinol oxidase subunit IV 299268..299600 Francisella tularensis subsp. tularensis FSC198 4199519 YP_666467.1 CDS cyoE NC_008245.1 299631 300479 D converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 299631..300479 Francisella tularensis subsp. tularensis FSC198 4199520 YP_666468.1 CDS lpxD2 NC_008245.1 300624 301667 R Similar to Q8A014 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase from Bacteroides thetaiotaomicron (346 aa). FASTA: opt: 687 Z-score: 795.8 E(): 2e-36 Smith-Waterman score: 687; 33.431 identity in 341 aa overlap paralog of FTF1571; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase complement(300624..301667) Francisella tularensis subsp. tularensis FSC198 4199648 YP_666469.1 CDS FTF0287c NC_008245.1 301735 302430 R Similar to Q8XIW2 Hypothetical protein CPE2001 from Clostridium perfringens (229 aa). FASTA: opt: 806 Z-score: 994.2 E(): 1.7e-47 Smith-Waterman score: 806; 51.948 identity in 231 aa overlap ORF ftt0287c; hypothetical protein complement(301735..302430) Francisella tularensis subsp. tularensis FSC198 4200415 YP_666470.1 CDS pdxY NC_008245.1 302430 303281 R Similar to Q8D4Q2 Pyridoxal/pyridoxine/pyridoxamine kinase from Vibrio vulnificus (290 aa). FASTA: opt: 611 Z-score: 766.0 E(): 8.9e-35 Smith-Waterman score: 611; 38.545identity in 275 aa overlap; pyridoxal kinase complement(302430..303281) Francisella tularensis subsp. tularensis FSC198 4199238 YP_666471.1 CDS FTF0289c NC_008245.1 303288 303722 R ORF ftt0289c; hypothetical protein complement(303288..303722) Francisella tularensis subsp. tularensis FSC198 4200416 YP_666472.1 CDS moxR NC_008245.1 303868 304824 D Similar to Q87YN6 MoxR protein, putative, from Pseudomonas syringae (319 aa). FASTA: opt: 1309 Z-score: 1518.5 E(): 9.9e-77 Smith-Waterman score: 1309; 61.489 identity in 309 aa overlap; methanol dehydrogenase regulatory protein 303868..304824 Francisella tularensis subsp. tularensis FSC198 4199850 YP_666473.1 CDS FTF0291 NC_008245.1 304837 305748 D Similar to Q87YN5 Conserved hypothetical protein from Pseudomonas syringae (314 aa). FASTA: opt: 561 Z-score: 693.3 bits: 136.4 E(): 1e-30 Smith-Waterman score: 561; 30.479 identity in 292 aa overlap ORF ftt0291; hypothetical protein 304837..305748 Francisella tularensis subsp. tularensis FSC198 4200417 YP_666474.1 CDS FTF0292 NC_008245.1 305738 306214 D Similar to Q8D3W9 Conserved hypothetical protein from Vibrio vulnificus (156 aa). FASTA: opt: 228 Z-score: 276.8 E(): 1.5e-07 Smith-Waterman score: 228; 28.481 identity in 158 aa overlap ORF ftt0292; hypothetical protein 305738..306214 Francisella tularensis subsp. tularensis FSC198 4200418 YP_666475.1 CDS FTF0293 NC_008245.1 306193 307212 D Similar to Q88LA6 Von Willebrand factor type A domain protein from Pseuodmonas putida (358 aa). FASTA: opt: 905 Z-score: 1015.4 E(): 1.1e-48 Smith-Waterman score: 905; 45.122 identity in 328 aa overlap ORF ftt0293; hypothetical protein 306193..307212 Francisella tularensis subsp. tularensis FSC198 4200419 YP_666476.1 CDS FTF0295 NC_008245.1 308945 310570 D Similar to Q8ECP0 Conserved hypothetical protein from Shewanella oneidensis (555 aa). FASTA: opt: 529 Z-score: 628.4 E(): 4.1e-27 Smith-Waterman score: 529; 24.371 identity in 517 aa overlap ORF ftt0295; hypothetical protein 308945..310570 Francisella tularensis subsp. tularensis FSC198 4200421 YP_666477.1 CDS pcp NC_008245.1 310571 311248 D Similar to PCP_CLOPE (Q8XKH1) Pyrrolidone-carboxylate peptidase from Clostridium perfringens (215 aa). FASTA: opt: 710 Z-score: 844.3 E(): 3.9e-39 Smith-Waterman score: 710; 52.020identity in 198 aa overlap; pyrrolidone-carboxylate peptidase 310571..311248 Francisella tularensis subsp. tularensis FSC198 4199228 YP_666478.1 CDS FTF0297 NC_008245.1 311256 311738 D ORF ftt0297; putative cytochrome c-type biogenesis protein 311256..311738 Francisella tularensis subsp. tularensis FSC198 4200422 YP_666479.1 CDS holC NC_008245.1 311769 312209 D Similar to Q8XWQ9 Probable DNA polymerase III (CHI subunit) protein from Ralstonia solanacearum (142 aa). FASTA: opt: 142 Z-score: 187.9 E(): 0.013 Smith-Waterman score: 142; 30.000identity in 120 aa overlap; DNA polymerase III subunit chi 311769..312209 Francisella tularensis subsp. tularensis FSC198 4200199 YP_666480.1 CDS valS NC_008245.1 312341 315100 D valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 312341..315100 Francisella tularensis subsp. tularensis FSC198 4200138 YP_666481.1 CDS FTF0300 NC_008245.1 315129 315983 D ORF ftt0300; hypothetical protein 315129..315983 Francisella tularensis subsp. tularensis FSC198 4200423 YP_666482.1 CDS FTF0301 NC_008245.1 316056 316925 D ORF ftt0301; hypothetical protein 316056..316925 Francisella tularensis subsp. tularensis FSC198 4200424 YP_666483.1 CDS FTF0302 NC_008245.1 317109 317444 D ORF ftt0302; hypothetical protein 317109..317444 Francisella tularensis subsp. tularensis FSC198 4200425 YP_666484.1 CDS lldD1 NC_008245.1 317441 318598 R Similar to Q9JTX1 L-lactate dehydrogenase from Neisseria meningitidis (390 aa). FASTA: opt: 1591 Z-score: 1977.5 E(): 3e-102 Smith-Waterman score: 1591; 60.789 identity in 380 aa overlap; L-lactate dehydrogenase complement(317441..318598) Francisella tularensis subsp. tularensis FSC198 4199556 YP_666485.1 CDS nfnB NC_008245.1 318625 319278 R catalyzes the reduction of nitroaromatic compounds such as nitrofurazone, quinones and the anti-tumor agent CB1954; NAD(P)H-dependent; oxygen insensitive; dihydropteridine reductase complement(318625..319278) Francisella tularensis subsp. tularensis FSC198 4200239 YP_666486.1 CDS FTF0305 NC_008245.1 319418 319795 D Similar to Q88NZ1 MutT/nudix family protein from Pseuodomonas putida (137 aa). FASTA: opt: 224 Z-score: 293.2 E(): 1.8e-08 Smith-Waterman score: 224; 34.545 identity in 110 aa overlap ORF ftt0305; MutT/nudix family protein 319418..319795 Francisella tularensis subsp. tularensis FSC198 4200426 YP_666487.1 CDS fumC NC_008245.1 319968 321359 D class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 319968..321359 Francisella tularensis subsp. tularensis FSC198 4199201 YP_666488.1 CDS gltX NC_008245.1 321489 322895 D Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 321489..322895 Francisella tularensis subsp. tularensis FSC198 4199800 YP_666489.1 CDS FTF0308 NC_008245.1 322886 323863 D ORF ftt0308; hypothetical protein 322886..323863 Francisella tularensis subsp. tularensis FSC198 4200427 YP_666490.1 CDS isftu2 NC_008245.1 323887 324630 R ISFtu2. Transposase, member of the IS5 family. Identical to Q8GM03 putative transposase from Francisella tularensis (247 aa).; transposase complement(323887..324630) Francisella tularensis subsp. tularensis FSC198 4200191 YP_666491.1 CDS FTF0310 NC_008245.1 324926 326380 D Similar to Q8XT33 Probable amino-acid permease transmembrane protein from Ralstonia solanacearum (543 aa). FASTA: opt: 999 Z-score: 1146.0 E(): 5.5e-5 Smith-Waterman score: 999; 34.924 identity in 461 aa overlap ORF ftt0310; amino acid permease 324926..326380 Francisella tularensis subsp. tularensis FSC198 4200428 YP_666492.1 CDS FTF0311c NC_008245.1 326712 327635 R Similar to Q9KKV6 Hypothetical protein VCA0994 from Vibrio cholerae (326 aa). FASTA: opt: 558 Z-score: 686.8 E(): 2.3e-30 Smith-Waterman score: 558; 31.949 identity in 313 aa overlap ORF ftt0311c; hypothetical protein complement(326712..327635) Francisella tularensis subsp. tularensis FSC198 4200429 YP_666493.1 CDS folA NC_008245.1 327717 328217 R Similar to Q9K7B6 Dihydrofolate reductase from Bacillus halodurans (163 aa). FASTA: opt: 465 Z-score: 598.3 E(): 2e-25 Smith-Waterman score: 465; 41.566 identity in 166 aa overlap; dihydrofolate reductase type I complement(327717..328217) Francisella tularensis subsp. tularensis FSC198 4199413 YP_666494.1 CDS rpsB NC_008245.1 328449 329168 D one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 328449..329168 Francisella tularensis subsp. tularensis FSC198 4200334 YP_666495.1 CDS tsf NC_008245.1 329190 330059 D EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 329190..330059 Francisella tularensis subsp. tularensis FSC198 4198972 YP_666496.1 CDS pyrH NC_008245.1 330063 330812 D Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 330063..330812 Francisella tularensis subsp. tularensis FSC198 4200592 YP_666497.1 CDS frr NC_008245.1 330841 331398 D Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 330841..331398 Francisella tularensis subsp. tularensis FSC198 4199190 YP_666498.1 CDS uppS NC_008245.1 331431 332204 D catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate; undecaprenyl pyrophosphate synthase 331431..332204 Francisella tularensis subsp. tularensis FSC198 4198985 YP_666499.1 CDS cdsA NC_008245.1 332218 333012 D Similar to Q88MH5 Phosphatidate cytidylyltransferase from Pseudomonas putida (271 aa). FASTA: 398 opt: 534 Z-score: 626.6 E(): 5.2e-27 Smith-Waterman score: 536; 35.926 identity in 270 aa overlap; phosphatidate cytidylyltransferase 332218..333012 Francisella tularensis subsp. tularensis FSC198 4200320 YP_666500.1 CDS dut NC_008245.1 333022 333468 D catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 333022..333468 Francisella tularensis subsp. tularensis FSC198 4199666 YP_666501.1 CDS pgsA NC_008245.1 333472 334068 D Similar to Q8XFD0 Phosphotidylglycerophosphate synthetase from Salmonella typhi (182 aa). FASTA: opt: 575 Z-score: 728.4 E(): 1.1e-32 Smith-Waterman score: 618; 50.000identity in 188 aa overlap; phosphatidylglycerophosphate synthetase 333472..334068 Francisella tularensis subsp. tularensis FSC198 4199245 YP_666502.1 CDS rpsL NC_008245.1 334203 334577 D interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 334203..334577 Francisella tularensis subsp. tularensis FSC198 4198950 YP_666503.1 CDS rpsG NC_008245.1 334616 335089 D binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 334616..335089 Francisella tularensis subsp. tularensis FSC198 4200339 YP_666504.1 CDS fusA NC_008245.1 335104 337218 D EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 335104..337218 Francisella tularensis subsp. tularensis FSC198 4199203 YP_666505.1 CDS rpsJ NC_008245.1 337239 337556 D NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 337239..337556 Francisella tularensis subsp. tularensis FSC198 4200342 YP_666506.1 CDS rplC NC_008245.1 337660 338295 D binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 337660..338295 Francisella tularensis subsp. tularensis FSC198 4200775 YP_666507.1 CDS rplD NC_008245.1 338325 338948 D L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 338325..338948 Francisella tularensis subsp. tularensis FSC198 4200776 YP_666508.1 CDS rplW NC_008245.1 338945 339244 D binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 338945..339244 Francisella tularensis subsp. tularensis FSC198 4198999 YP_666509.1 CDS rplB NC_008245.1 339266 340090 D one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 339266..340090 Francisella tularensis subsp. tularensis FSC198 4200774 YP_666510.1 CDS rpsS NC_008245.1 340105 340383 D protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 340105..340383 Francisella tularensis subsp. tularensis FSC198 4198957 YP_666511.1 CDS rplV NC_008245.1 340399 340734 D binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 340399..340734 Francisella tularensis subsp. tularensis FSC198 4198998 YP_666512.2 CDS rpsC NC_008245.1 340749 >341408 D truncated; forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 340749..>341408 Francisella tularensis subsp. tularensis FSC198 4200335 YP_666513.1 CDS rplP NC_008245.1 341421 341834 D located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 341421..341834 Francisella tularensis subsp. tularensis FSC198 4198992 YP_666514.1 CDS rpmC NC_008245.1 341834 342034 D one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 341834..342034 Francisella tularensis subsp. tularensis FSC198 4199004 YP_666515.1 CDS rpsQ NC_008245.1 342047 342298 D primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 342047..342298 Francisella tularensis subsp. tularensis FSC198 4198955 YP_666516.1 CDS rplN NC_008245.1 342390 342758 D binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 342390..342758 Francisella tularensis subsp. tularensis FSC198 4198990 YP_666517.1 CDS rplX NC_008245.1 342780 343097 D assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 342780..343097 Francisella tularensis subsp. tularensis FSC198 4199000 YP_666518.1 CDS rplE NC_008245.1 343109 343648 D part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 343109..343648 Francisella tularensis subsp. tularensis FSC198 4200777 YP_666519.1 CDS rpsN NC_008245.1 343667 343972 D located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 343667..343972 Francisella tularensis subsp. tularensis FSC198 4198952 YP_666520.1 CDS rpsH NC_008245.1 343989 344387 D binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 343989..344387 Francisella tularensis subsp. tularensis FSC198 4200340 YP_666521.1 CDS rplF NC_008245.1 344406 344942 D ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 344406..344942 Francisella tularensis subsp. tularensis FSC198 4200778 YP_666522.1 CDS rplR NC_008245.1 344965 345318 D binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 344965..345318 Francisella tularensis subsp. tularensis FSC198 4198994 YP_666523.1 CDS rpsE NC_008245.1 345346 345846 D located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 345346..345846 Francisella tularensis subsp. tularensis FSC198 4200337 YP_666524.1 CDS rpmD NC_008245.1 345853 346038 D L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 345853..346038 Francisella tularensis subsp. tularensis FSC198 4199005 YP_666525.1 CDS rplO NC_008245.1 346045 346476 D late assembly protein; 50S ribosomal protein L15 346045..346476 Francisella tularensis subsp. tularensis FSC198 4198991 YP_666526.1 CDS secY NC_008245.1 346487 347812 D forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 346487..347812 Francisella tularensis subsp. tularensis FSC198 4200740 YP_666527.1 CDS rpmJ NC_008245.1 347836 347949 D smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 347836..347949 Francisella tularensis subsp. tularensis FSC198 4200325 YP_666528.1 CDS rpsM NC_008245.1 348066 348422 D located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 348066..348422 Francisella tularensis subsp. tularensis FSC198 4198951 YP_666529.1 CDS rpsK NC_008245.1 348462 348851 D located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 348462..348851 Francisella tularensis subsp. tularensis FSC198 4198949 YP_666530.1 CDS rpsD NC_008245.1 348873 349493 D primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 348873..349493 Francisella tularensis subsp. tularensis FSC198 4200336 YP_666531.1 CDS rpoA1 NC_008245.1 349551 350522 D catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 349551..350522 Francisella tularensis subsp. tularensis FSC198 4200326 YP_666532.1 CDS rplQ NC_008245.1 350567 351004 D is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 350567..351004 Francisella tularensis subsp. tularensis FSC198 4198993 YP_666533.1 CDS isftu1 NC_008245.1 351158 351942 D ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and also mariner elements, show that this transposase shares strongly conserved residues, including a fully conserved dipeptide,Asp-Glu (DE), and a block consisting of a fully conserved Asp and highly conserved Glu, separated by 34 or 35 residues (D35E). The conserved dipeptide is only present if ribosomal frameshifting occurs.; transposase join(351158..351484,351484..351942) Francisella tularensis subsp. tularensis FSC198 4199624 YP_666534.1 CDS FTF0354 NC_008245.1 352871 353866 D Duplicate of FTF0378 and FTF1263 ORF ftt0354; hypothetical protein 352871..353866 Francisella tularensis subsp. tularensis FSC198 4200430 YP_666535.1 CDS isftu1 NC_008245.1 354158 354942 R ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and also mariner elements, show that this transposase shares strongly conserved residues, including a fully conserved dipeptide,Asp-Glu (DE), and a block consisting of a fully conserved Asp and highly conserved Glu, separated by 34 or 35 residues (D35E). The conserved dipeptide is only present if ribosomal frameshifting occurs.; transposase complement(join(354158..354616,354616..354942)) Francisella tularensis subsp. tularensis FSC198 4199625 YP_666536.1 CDS htpG NC_008245.1 355104 356990 D molecular chaperone; heat shock protein 90 355104..356990 Francisella tularensis subsp. tularensis FSC198 4200210 YP_666537.1 CDS isftu1 NC_008245.1 357314 358098 R ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and also mariner elements, show that this transposase shares strongly conserved residues, including a fully conserved dipeptide,Asp-Glu (DE), and a block consisting of a fully conserved Asp and highly conserved Glu, separated by 34 or 35 residues (D35E). The conserved dipeptide is only present if ribosomal frameshifting occurs.; transposase complement(join(357314..357772,357772..358098)) Francisella tularensis subsp. tularensis FSC198 4199626 YP_666538.1 CDS FTF0359 NC_008245.1 359366 359836 D ORF ftt0359; hypothetical protein 359366..359836 Francisella tularensis subsp. tularensis FSC198 4200432 YP_666539.1 CDS FTF0360 NC_008245.1 359973 360797 D Similar to Q82V84 Short-chain dehydrogenase/reductase (SDR) superfamily from Nitrosomonas europaea (279 aa). FASTA: opt: 829 Z-score: 982.8 E(): 7.5e-47 Smith-Waterman score: 829; 49.632 identity in 272 aa overlap ORF ftt0360; short-chain dehydrogenase 359973..360797 Francisella tularensis subsp. tularensis FSC198 4200433 YP_666540.1 CDS FTF0361c NC_008245.1 360819 362168 R Similar to Q8Z506 Putative amino acid transporter from Salmonella typhi (473 aa). FASTA: opt: 717 Z-score: 754.8 E(): 3.8e-34 Smith-Waterman score: 755; 29.783 identity in 460 aa overlap ORF ftt0361c; amino acid transporter complement(360819..362168) Francisella tularensis subsp. tularensis FSC198 4200434 YP_666541.1 CDS FTF0362c NC_008245.1 362427 363299 R ORF ftt0362c; hypothetical protein complement(362427..363299) Francisella tularensis subsp. tularensis FSC198 4200435 YP_666542.1 CDS isftu1 NC_008245.1 363467 364251 D ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and also mariner elements, show that this transposase shares strongly conserved residues, including a fully conserved dipeptide,Asp-Glu (DE), and a block consisting of a fully conserved Asp and highly conserved Glu, separated by 34 or 35 residues (D35E). The conserved dipeptide is only present if ribosomal frameshifting occurs.; transposase join(363467..363793,363793..364251) Francisella tularensis subsp. tularensis FSC198 4199627 YP_666543.1 CDS FTF0364c NC_008245.1 364375 364824 R ORF ftt0364c; hypothetical protein complement(364375..364824) Francisella tularensis subsp. tularensis FSC198 4200436 YP_666544.1 CDS poxF NC_008245.1 365305 366036 D Similar to Q8PFB8 Phenol hydroxylase from Xanthomonas axonopodis (365 aa). FASTA: opt: 567 Z-score: 717.5 E(): 4.5e-32 Smith-Waterman score: 567; 38.211 identity in 246 aa overlap The protein seems to be shorter (<115 aa) than the matching proteins.; phenol hydroxylase 365305..366036 Francisella tularensis subsp. tularensis FSC198 4199742 YP_666545.1 CDS rpmE NC_008245.1 366158 366373 D RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 366158..366373 Francisella tularensis subsp. tularensis FSC198 4199006 YP_666546.1 CDS gshA NC_008245.1 366584 368089 R Similar to Q88AR1 Glutamate--cysteine ligase from Pseudomonas syringae (529 aa). FASTA: opt: 1113 Z-score: 1281.1 E(): 1.8e-63 Smith-Waterman score: 1113; 39.250 identity in 507 aa overlap; glutamate--cysteine ligase complement(366584..368089) Francisella tularensis subsp. tularensis FSC198 4200304 YP_666547.1 CDS mviN NC_008245.1 368142 369686 R Similar to AAO89943 (Q83ED5) Integral membrane protein MviN from Coxiella burnetii (515 aa). FASTA: opt: 836 Z-score: 887.1 E(): 1.6e-41 Smith-Waterman score: 836; 30.452 identity in 509 aa overlap; virulence factor MviN complement(368142..369686) Francisella tularensis subsp. tularensis FSC198 4200116 YP_666548.1 CDS FTF0369c NC_008245.1 369709 370770 R ORF ftt0369c; hypothetical protein complement(369709..370770) Francisella tularensis subsp. tularensis FSC198 4200437 YP_666549.1 CDS yjeE NC_008245.1 370853 371263 R Similar to Q8Z189 Hypothetical protein yjeE from Salmonella typhi (153 aa). FASTA: opt: 517 Z-score: 623.3 E(): 7.9e-27 Smith-Waterman score: 517; 56.489 identity in 131 aa overlap; nucleotide-binding protein, yjeE complement(370853..371263) Francisella tularensis subsp. tularensis FSC198 4199112 YP_666550.1 CDS folC NC_008245.1 371241 372422 R Similar to Q8ECR5 FolC bifunctional protein from Shewanella oneidensis (431 aa). FASTA: opt: 507 Z-score: 630.2 E(): 3.3e-27 Smith-Waterman score: 627; 32.274 identity in 409 aa overlap; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase complement(371241..372422) Francisella tularensis subsp. tularensis FSC198 4199415 YP_666551.1 CDS accD NC_008245.1 372437 373345 R Similar to Q8XFJ5 Acetyl-CoA carboxylase beta subunit from Salmonella typhi (304 aa). FASTA: opt: 1197 Z-score: 1430.2 E(): 9.1e-72 Smith-Waterman score: 1197; 62.116 identity in 293 aa overlap; Acetyl-CoA carboxylase beta subunit complement(372437..373345) Francisella tularensis subsp. tularensis FSC198 4199749 YP_666552.1 CDS ndk NC_008245.1 373381 373803 R catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase complement(373381..373803) Francisella tularensis subsp. tularensis FSC198 4200238 YP_666553.1 CDS pyrG NC_008245.1 373876 375516 R CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase complement(373876..375516) Francisella tularensis subsp. tularensis FSC198 4200591 YP_666554.1 CDS FTF0376c NC_008245.1 377434 378492 R Weak hits at position aa 250-350 to many cytochrome oxidase subunit I eg:(Q85L50). ORF ftt0376c; hypothetical protein complement(377434..378492) Francisella tularensis subsp. tularensis FSC198 4200439 YP_666555.1 CDS isftu1 NC_008245.1 378859 379643 D ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and also mariner elements, show that this transposase shares strongly conserved residues, including a fully conserved dipeptide,Asp-Glu (DE), and a block consisting of a fully conserved Asp and highly conserved Glu, separated by 34 or 35 residues (D35E). The conserved dipeptide is only present if ribosomal frameshifting occurs.; transposase join(378859..379188,379188..379643) Francisella tularensis subsp. tularensis FSC198 4199628 YP_666556.1 CDS FTF0378c NC_008245.1 379935 380930 R Duplicate of FTF0354 and FTF1263 ORF ftt0378c; hypothetical protein complement(379935..380930) Francisella tularensis subsp. tularensis FSC198 4200440 YP_666557.1 CDS gdh NC_008245.1 381967 383316 R converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; glutamate dehydrogenase complement(381967..383316) Francisella tularensis subsp. tularensis FSC198 4199282 YP_666558.1 CDS isftu2 NC_008245.1 383655 384398 D ISFtu2. Transposase, member of the IS5 family. Identical to Q8GM03 putative transposase from Francisella tularensis (247 aa).; transposase 383655..384398 Francisella tularensis subsp. tularensis FSC198 4199287 YP_666559.1 CDS FTF0382 NC_008245.1 384523 384627 D ORF ftt0382; hypothetical protein 384523..384627 Francisella tularensis subsp. tularensis FSC198 4200441 YP_666560.1 CDS FTF0383 NC_008245.1 385638 385973 D ORF ftt0383; hypothetical protein 385638..385973 Francisella tularensis subsp. tularensis FSC198 4200442 YP_666561.1 CDS psd NC_008245.1 385946 386797 R catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine; phosphatidylserine decarboxylase complement(385946..386797) Francisella tularensis subsp. tularensis FSC198 4199946 YP_666562.1 CDS FTF0385 NC_008245.1 386897 387877 D ORF ftt0385; hypothetical protein 386897..387877 Francisella tularensis subsp. tularensis FSC198 4200443 YP_666563.1 CDS nadM NC_008245.1 387886 388929 D NadM-Nudix subfamily; involved in creation of nicotanimide adenine dinucleotide NAD from either biosynthetic or salvage pathways; bifunctional nicotinamide mononucleotide adenylyltransferase/ADP-ribose pyrophosphatase 387886..388929 Francisella tularensis subsp. tularensis FSC198 4200233 YP_666564.1 CDS glmU NC_008245.1 388943 390310 D Similar to Q9KNH7 UDP-N-acetylglucosamine pyrophosphorylase from Vibrio cholerae (453 aa). FASTA: opt: 1597 Z-score: 1863.6 E(): 6.5e-96 Smith-Waterman score: 1597; 53.201 identity in 453 aa overlap; UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase 388943..390310 Francisella tularensis subsp. tularensis FSC198 4199788 YP_666565.1 CDS glmS NC_008245.1 390331 392169 D Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 390331..392169 Francisella tularensis subsp. tularensis FSC198 4199787 YP_666566.1 CDS FTF0389 NC_008245.1 392253 392777 D Similar to Q9RWR2 Acetyltransferase, putative, from Deinococcus radiodurans (188 aa). FASTA: opt: 188 Z-score: 245.7 E(): 8.5e-06 Smith-Waterman score: 188; 28.105 identity in 153 aa overlap ORF ftt0389; acetyltransferase 392253..392777 Francisella tularensis subsp. tularensis FSC198 4200444 YP_666567.1 CDS rpsU NC_008245.1 392770 392967 R a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 complement(392770..392967) Francisella tularensis subsp. tularensis FSC198 4198959 YP_666568.1 CDS cspC NC_008245.1 392967 393170 R Similar to Q8D6M5 Cold shock protein from Vibrio vulnificus (70 aa). FASTA: opt: 272 Z-score: 403.6 E(): 1.4e-14 Smith-Waterman score: 272; 58.571 identity in 70 aa overlap; cold shock protein complement(392967..393170) Francisella tularensis subsp. tularensis FSC198 4200280 YP_666569.1 CDS FTF0392c NC_008245.1 393418 393747 R Similar to Q8TT97 Hypothetical protein MA0540 from Methanosarcina mazei (95 aa). FASTA: opt: 151 Z-score: 197.5 E(): 0.0038 Smith-Waterman score: 151; 35.789 identity in 95 aa overlap ORF ftt0392c; hypothetical protein complement(393418..393747) Francisella tularensis subsp. tularensis FSC198 4200445 YP_666570.1 CDS map NC_008245.1 393874 394644 D Similar to Q886P4 Methionine aminopeptidase,type I from Pseudomonas syringae (260 aa). FASTA: opt: 1243 Z-score: 1568.2 E(): 1.9e-79 Smith-Waterman score: 1243; 70.120 identity in 251 aa overlap; methionine aminopeptidase 393874..394644 Francisella tularensis subsp. tularensis FSC198 4199661 YP_666571.1 CDS FTF0394 NC_008245.1 394646 395494 D ORF ftt0394; hypothetical protein 394646..395494 Francisella tularensis subsp. tularensis FSC198 4200446 YP_666572.1 CDS FTF0395 NC_008245.1 395540 396253 D Similar to Q9L5J1 hypothetical protein from Salmonella typhi (259 aa). FASTA: opt: 585 Z-score: 707.5 E(): 1.6e-31 Smith-Waterman score: 680; 46.743 identity in 261 aa overlap ORF ftt0395; hypothetical protein 395540..396253 Francisella tularensis subsp. tularensis FSC198 4200447 YP_666573.1 CDS parC NC_008245.1 396386 398611 D decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 396386..398611 Francisella tularensis subsp. tularensis FSC198 4200095 YP_666574.1 CDS mtn NC_008245.1 398611 399297 D enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 398611..399297 Francisella tularensis subsp. tularensis FSC198 4200103 YP_666575.1 CDS FTF0398c NC_008245.1 399284 399883 R ORF ftt0398c; hypothetical protein complement(399284..399883) Francisella tularensis subsp. tularensis FSC198 4200448 YP_666576.1 CDS FTF0399c NC_008245.1 399876 400994 R Similar to Q885D8 BNR/Asp-box repeat protein from Pseudomonas syringae (432 aa). FASTA: opt: 536 Z-score: 654.4 E(): 1.5e-28 Smith-Waterman score: 536; 31.922 identity in 307 aa overlap ORF ftt0399c; BNR/Asp-box repeat-containing protein complement(399876..400994) Francisella tularensis subsp. tularensis FSC198 4200449 YP_666577.1 CDS slt NC_008245.1 401193 403169 D Similar to Q88L07 Soluble lytic transglycosylase,putative from Pseudomonas putida (657 aa). FASTA: opt: 596 Z-score: 646.0 E(): 3.9e-28 Smith-Waterman score: 819; 27.822 identity in 629 aa overlap.; soluble lytic murein transglycosylase 401193..403169 Francisella tularensis subsp. tularensis FSC198 4200744 YP_666578.1 CDS FTF0401 NC_008245.1 403459 404181 D Partial homology to carboxy terminus of Q9CLV4a Hypothetical protein PM1097 from Pasteurella multocida (417 aa). FASTA: opt: 269 Z-score: 330.3 E(): 1.7e-10 Smith-Waterman score: 269; 26.050identity in 238 aa overlap ORF ftt0401; hypothetical protein 403459..404181 Francisella tularensis subsp. tularensis FSC198 4200450 YP_666579.1 CDS dnaE NC_008245.1 404538 408017 D Similar to DP3A_SALTY (P14567) DNA polymerase III alpha subunit from Salmonella typhimurium (1160 aa). FASTA: opt: 3099 Z-score: 3288.3 E(): 2.6e-175 Smith-Waterman score: 3099; 44.781identity in 1121 aa overlap.; DNA polymerase III subunit alpha 404538..408017 Francisella tularensis subsp. tularensis FSC198 4199352 YP_666580.1 CDS def1 NC_008245.1 408093 408728 D Similar to DEF_LEPIN (Q93LE9) Peptide deformylase from Leptospira interrogans (178 aa). FASTA: opt: 312 Z-score: 399.2 E(): 2.4e-14 Smith-Waterman score: 312; 35.758 identity in 165 aa overlap; peptide deformylase 408093..408728 Francisella tularensis subsp. tularensis FSC198 4199534 YP_666581.1 CDS lolC NC_008245.1 409432 410694 D Similar to Q83CV1 Putative lipoprotein ABC transporter,permease protein from Coxiella burnetii (414 aa). FASTA: opt: 1273 Z-score: 1436.4 E(): 4.1e-72 Smith-Waterman score: 1273; 48.104 identity in 422 aa overlap; lipoprotein releasing system, subunit C,putative membrane protein 409432..410694 Francisella tularensis subsp. tularensis FSC198 4199560 YP_666582.1 CDS lolD NC_008245.1 410687 411382 D Similar to LOLD_NEIMA (P57030) Lipoprotein releasing system ATP-binding transport protein from Neisseria meningitidis (231 aa). FASTA: opt: 791 Z-score: 892.8 E(): 7e-42 Smith-Waterman score: 791; 51.770 identity in 226 aa overlap; lipoprotein releasing system, subunit D, ABC transporter ATP-binding protein 410687..411382 Francisella tularensis subsp. tularensis FSC198 4199561 YP_666583.1 CDS cadA NC_008245.1 411499 413640 D Similar to DCLY_ECOLI (P23892) Lysine decarboxylase, inducible from E. coli (715 aa) FASTA: opt: 2608 Z-score: 3095.0 E(): 1.7e-164 Smith-Waterman score: 2608; 53.912 identity in 703 aa overlap; lysine decarboxylase, inducable 411499..413640 Francisella tularensis subsp. tularensis FSC198 4200312 YP_666584.1 CDS gcvT NC_008245.1 413732 414808 D catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 413732..414808 Francisella tularensis subsp. tularensis FSC198 4199281 YP_666585.1 CDS gcvH1 NC_008245.1 414864 415247 D Similar to Q8FE66 Glycine cleavage system H protein from E coli (130 aa). FASTA: opt: 526 Z-score: 699.9 E(): 4.3e-31 Smith-Waterman score: 526; 60.938 identity in 128 aa overlap; glycine cleavage system H protein 414864..415247 Francisella tularensis subsp. tularensis FSC198 4199277 YP_666586.1 CDS gcvP1 NC_008245.1 415311 416678 D acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein; glycine dehydrogenase subunit 1 415311..416678 Francisella tularensis subsp. tularensis FSC198 4199279 YP_666587.1 CDS gcvP2 NC_008245.1 416684 418129 D acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; glycine dehydrogenase subunit 2 416684..418129 Francisella tularensis subsp. tularensis FSC198 4199280 YP_666588.1 CDS aroE2 NC_008245.1 418249 419094 R Similar to Q8FQC7 Putative shikimate 5-dehydrogenase from Corynebacterium efficiens(269 aa). FASTA: opt: 283 Z-score: 321.7 E(): 4.6e-10 Smith-Waterman score: 287; 28.077 identity in 260 aa overlap.; shikimate 5-dehydrogenase complement(418249..419094) Francisella tularensis subsp. tularensis FSC198 4199436 YP_666589.1 CDS pulB NC_008245.1 419120 422332 R Similar to Q8XK16 Pullulanase from Clostridium perfringens (1064 aa). FASTA: opt: 3419 Z-score: 3958.4 E(): 1.4e-212 Smith-Waterman score: 3419; 48.369identity in 1042 aa overlap Other FASTA hits have lower scores due to generally being smaller in size. Q8XK16 is an electronic annotation; pullulonase complement(419120..422332) Francisella tularensis subsp. tularensis FSC198 4199950 YP_666590.1 CDS glgB NC_008245.1 422366 424288 R catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching protein complement(422366..424288) Francisella tularensis subsp. tularensis FSC198 4199783 YP_666591.1 CDS pgm NC_008245.1 424590 426224 D catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; phosphoglucomutase 424590..426224 Francisella tularensis subsp. tularensis FSC198 4199244 YP_666592.1 CDS glgA NC_008245.1 427540 429009 D catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; glycogen synthase 427540..429009 Francisella tularensis subsp. tularensis FSC198 4199782 YP_666593.1 CDS malP NC_008245.1 429114 431387 D Similar to Q8DN49 Maltodextrin phosphorylase from Streptococcus pneumoniae (752 aa). FASTA: opt: 2938 Z-score: 3443.0 E(): 6.9e-184 Smith-Waterman score: 2938; 59.569 identity in 742 aa overlap; maltodextrin phosphorylase 429114..431387 Francisella tularensis subsp. tularensis FSC198 4199658 YP_666594.1 CDS malA NC_008245.1 431431 432894 D amylomaltase; acts to release glucose from maltodextrins; 4-alpha-glucanotransferase 431431..432894 Francisella tularensis subsp. tularensis FSC198 4199657 YP_666595.1 CDS glyQ NC_008245.1 432968 433876 D glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 432968..433876 Francisella tularensis subsp. tularensis FSC198 4200289 YP_666596.1 CDS murE NC_008245.1 434087 435526 D Similar to MURE_NEIMB (Q9K0Y9) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase from Neisseria meningitidis (492 aa). FASTA: opt: 1037 Z-score: 1223.7, E(): 2.9e-60 Smith-Waterman score: 1037; 40.795 identity in 478 aa overlap; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 434087..435526 Francisella tularensis subsp. tularensis FSC198 4200108 YP_666597.1 CDS murF NC_008245.1 436318 437676 D Similar to Q87SG8 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate -D-alanyl-D-alanyl ligase from Vibrio parahaemolyticus (454 aa). FASTA: opt: 870 Z-score: 1005.8 E(): 3.9e-48 Smith-Waterman score: 870; 35.011 identity in 457 aa overlap deleted EC_number 6.3.2.15; UDP-N--acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate-D-alanyl-D-alanyl ligase 436318..437676 Francisella tularensis subsp. tularensis FSC198 4200109 YP_666598.1 CDS FTF0423 NC_008245.1 437685 437864 D ORF ftt0423; hypothetical protein 437685..437864 Francisella tularensis subsp. tularensis FSC198 4200452 YP_666599.1 CDS FTF0424 NC_008245.1 437995 438504 D ORF ftt0424; hypothetical protein 437995..438504 Francisella tularensis subsp. tularensis FSC198 4200453 YP_666600.1 CDS asd NC_008245.1 438560 439654 R catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase complement(438560..439654) Francisella tularensis subsp. tularensis FSC198 4199688 YP_666601.1 CDS thrC1 NC_008245.1 442964 444250 D catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 442964..444250 Francisella tularensis subsp. tularensis FSC198 4199141 YP_666602.1 CDS speH NC_008245.1 444891 445325 D Similar to SPEH_METJA (Q57763) S-adenosylmethionine decarboxylase proenzyme from Methanococcus jannaschii (124 aa). FASTA: opt: 355 Z-score: 487.2, E(): 3e-19 Smith-Waterman score: 355; 44.737 identity in 114 aa overlap; S-adenosylmethionine decarboxylase 444891..445325 Francisella tularensis subsp. tularensis FSC198 4199082 YP_666603.1 CDS speE NC_008245.1 445325 446194 D catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase 445325..446194 Francisella tularensis subsp. tularensis FSC198 4199081 YP_666604.1 CDS speA NC_008245.1 446220 447629 D Similar to Q8A2B1 Putative arginine decarboxylase from Bacteroides thetaiotamicron (630 aa). FASTA: opt: 571 Z-score: 678.2 E(): 6.9e-30 Smith-Waterman score: 689; 28.755 identity in 546 aa overlap; putative arginine decarboxylase 446220..447629 Francisella tularensis subsp. tularensis FSC198 4199080 YP_666605.1 CDS FTF0433 NC_008245.1 447679 447867 D ORF ftt0433; hypothetical protein 447679..447867 Francisella tularensis subsp. tularensis FSC198 4200454 YP_666606.1 CDS FTF0434 NC_008245.1 447848 448834 D Similar to Q8KCB6 Hypothetical protein CT1508 from Chlorobium tepidum (347 aa). FASTA: opt: 742 Z-score: 939.4 E(): 2e-44 Smith-Waterman score: 837; 38.484 identity in 343 aa overlap PAD_porph is a possible virulence factor for P. gingivalis: PMID: 10377098 ORF ftt0434; hypothetical protein 447848..448834 Francisella tularensis subsp. tularensis FSC198 4200455 YP_666607.1 CDS FTF0435 NC_008245.1 448836 449696 D Similar to Q87NU4 Putative carbon-nitrogen hydrolase from Vibrio parahaemolyticus (288 aa). FASTA: opt: 1139 Z-score: 1419.0 E(): 3.8e-71 Smith-Waterman score: 1139; 57.971 identity in 276 aa overlap. Possible candidate for citrulline ureidase ORF ftt0435; carbon-nitrogen hydrolase family protein 448836..449696 Francisella tularensis subsp. tularensis FSC198 4200456 YP_666608.1 CDS lpxH NC_008245.1 449713 450429 R catalyzes the formation of 2,3=diacylglucosamine 1-phosphate from UDP-2,3=diacylglucosamine; UDP-2,3-diacylglucosamine hydrolase complement(449713..450429) Francisella tularensis subsp. tularensis FSC198 4199649 YP_666609.1 CDS pyrE NC_008245.1 450419 451045 R involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase complement(450419..451045) Francisella tularensis subsp. tularensis FSC198 4199132 YP_666610.1 CDS mpl NC_008245.1 451205 452575 D Similar to MPL_ECOLI (P37773) UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diamino pimelate ligase (murein peptide ligase) from E coli (457 aa). FASTA: opt: 1392, Z-score: 1656.5, E(): 2.3e-84,Smith-Waterman score: 1392; 47.912 identity in 455 aa overlap; UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 451205..452575 Francisella tularensis subsp. tularensis FSC198 4199851 YP_666611.1 CDS yjfH NC_008245.1 452572 453228 D Similar to YJFH_ECOLI (P39290) hypothetical tRNA/rRNA methyltransferase yjfH from E. coli (243 aa). FASTA: opt: 556, Z-score: 695.5, E(): 7.5e-31 Smith-Waterman score: 556; 43.128 identity in 211 aa overlap. This CDS is disrupted by the insertion of an ISFtu1 element close to the C-terminal. It is not clear whether this insertion affects the function of the protein; tRNA/rRNA methyltransferase 452572..453228 Francisella tularensis subsp. tularensis FSC198 4199029 YP_666612.1 CDS isftu1 NC_008245.1 453302 454086 R ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and also mariner elements, show that this transposase shares strongly conserved residues, including a fully conserved dipeptide,Asp-Glu (DE), and a block consisting of a fully conserved Asp and highly conserved Glu, separated by 34 or 35 residues (D35E). The conserved dipeptide is only present if ribosomal frameshifting occurs.; transposase complement(join(453302..453760,453760..454086)) Francisella tularensis subsp. tularensis FSC198 4199629 YP_666613.1 CDS FTF0442c NC_008245.1 454957 456150 R Similar to Q8EU72 Bicyclomycin resistance protein from Oceanobacillus iheyensis (412 aa). FASTA: opt: 614 Z-score: 668.2 E(): 2.5e-29 Smith-Waterman score: 614; 30.179identity in 391 aa overlap ORF ftt0442c; major facilitator transporter complement(454957..456150) Francisella tularensis subsp. tularensis FSC198 4199010 YP_666614.1 CDS FTF0443 NC_008245.1 456422 457465 D Similar to Q83C03 Conserved domain protein from Coxiella burnetii (377 aa). FASTA: opt: 359 Z-score: 409.9 E(): 6.1e-15 Smith-Waterman score: 380; 27.350 identity in 351 aa overlap ORF ftt0443; hypothetical protein 456422..457465 Francisella tularensis subsp. tularensis FSC198 4199011 YP_666615.1 CDS tet NC_008245.1 457536 458774 D Similar to Q83CB9 Multidrug transporter, putative from Coxiella burnetii (412 aa). FASTA: opt: 558 Z-score: 638.9 E(): 1.1e-27 Smith-Waterman score: 558; 25.854identity in 410 aa overlap. Similar to tetA and tetC which are situated on a plasmid in E. coli; multidrug transporter (tetracycline resistance protein) 457536..458774 Francisella tularensis subsp. tularensis FSC198 4199137 YP_666616.1 CDS FTF0446 NC_008245.1 460705 462147 D Similar to Q83RB7 Putative transport protein from Shigella flexneri (500 aa). FASTA: opt: 567 Z-score: 573.2 E(): 4.9e-24 Smith-Waterman score: 578; 26.122 identity in 490 aa overlap ORF ftt0446; proton-dependent oligopeptide transport (POT) family protein 460705..462147 Francisella tularensis subsp. tularensis FSC198 4199012 YP_666617.1 CDS FTF0447c NC_008245.1 462291 463631 R Similar to Q83DW3 Hypothetical protein from Coxiella burnetii (497 aa). FASTA: opt: 334 Z-score: 356.6 E(): 5.7e-12 Smith-Waterman score: 336; 24.129 identity in 402 aa overlap ORF ftt0447c; hypothetical protein complement(462291..463631) Francisella tularensis subsp. tularensis FSC198 4199013 YP_666618.1 CDS glnS NC_008245.1 463652 465298 R catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase complement(463652..465298) Francisella tularensis subsp. tularensis FSC198 4199790 YP_666619.1 CDS pckA NC_008245.1 465443 467035 D PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 465443..467035 Francisella tularensis subsp. tularensis FSC198 4200097 YP_666620.1 CDS mraY NC_008245.1 467110 468207 D First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 467110..468207 Francisella tularensis subsp. tularensis FSC198 4199853 YP_666621.1 CDS murD NC_008245.1 468207 469457 D Similar to MURD_CHLCV (Q821S1) UDP-N-acetylmuramoylalanine--D-glutamate ligase from Chlamydophila caviae (419 aa) FASTA: opt: 516 Z-score: 615.2 E(): 2.2e-26 Smith-Waterman score: 549; 28.000 identity in 425 aa overlap; UDP-N-acetylmuramoylalanine--D-glutamate ligase 468207..469457 Francisella tularensis subsp. tularensis FSC198 4200107 YP_666622.1 CDS ftsW NC_008245.1 469467 470672 D Similar to Q9KPG6 Cell division protein FtsW from Vibrio cholerae (398 aa). FASTA: opt: 1114 Z-score: 1237.3 E(): 5e-61 Smith-Waterman score: 1114; 44.892 identity in 372 aa overlap; cell division protein FtsW 469467..470672 Francisella tularensis subsp. tularensis FSC198 4199197 YP_666623.1 CDS FTF0453c NC_008245.1 470680 471486 R Similar to Q83DW2 Hypothetical protein from Coxiella burnetii (273 aa). FASTA: opt: 554 Z-score: 648.8 E(): 3e-28 Smith-Waterman score: 554; 37.407identity in 270 aa overlap ORF ftt0453c; hypothetical protein complement(470680..471486) Francisella tularensis subsp. tularensis FSC198 4199014 YP_666624.1 CDS yfdH NC_008245.1 471585 472541 D Similar to Q83DW4 Glycosyl transferase, group 2 family protein from Coxiella burnetii (324 aa). FASTA: opt: 896 Z-score: 1055.7 E(): 6.5e-51 Smith-Waterman score: 896; 43.189identity in 301 aa overlap; glycosyl transferase family protein 471585..472541 Francisella tularensis subsp. tularensis FSC198 4199098 YP_666625.1 CDS FTF0455c NC_008245.1 472933 474696 R Similar to Q8XQM9 Probable transmembrane protein from Ralstonia solanacearum (551 aa). FASTA: opt: 683 Z-score: 749.4 E(): 7.6e-34 Smith-Waterman score: 683; 29.174 identity in 545 aa overlap ORF ftt0455c; dolichyl-phosphate-mannose-protein mannosyltransferase family protein complement(472933..474696) Francisella tularensis subsp. tularensis FSC198 4199015 YP_666626.1 CDS FTF0456c NC_008245.1 474788 475081 R Similar to Y941_COXBU Hypothetical UPF0269 protein CBU0941 from Coxiella burnetii (90 aa). FASTA: opt: 346 Z-score: 470.4 E(): 2.6e-18 Smith-Waterman score: 346; 55.422 identity in 83 aa overlap ORF ftt0456c; hypothetical protein complement(474788..475081) Francisella tularensis subsp. tularensis FSC198 4199016 YP_666627.1 CDS yccK NC_008245.1 475072 475386 R Similar to Q9CNM6 Hypothetical protein PM0401 from Pasteurella multocida (109 aa). initn: 382 init1: 382 opt: 382 Z-score: 511.4 bits: 99.7 E(): 1.4e-20 Smith-Waterman score: 382; 58.586identity (58.58639ngapped) in 99 aa overlap; anaerobic sulfite reductase subunit complement(475072..475386) Francisella tularensis subsp. tularensis FSC198 4199096 YP_666628.1 CDS sspA NC_008245.1 475472 476104 D Similar to SSPA_HAESO (P31784) Stringent starvation protein A homolog from Haemophilus somnus (212 aa). FASTA: opt: 377 Z-score: 473.8 E(): 1.7e-18 Smith-Waterman score: 377; 35.106 identity in 188 aa overlap; stringent starvation protein A 475472..476104 Francisella tularensis subsp. tularensis FSC198 4199085 YP_666629.1 CDS sohB NC_008245.1 476116 477135 D SohB; periplasmic protein; member of the peptidase S49 family; putative periplasmic protease 476116..477135 Francisella tularensis subsp. tularensis FSC198 4199079 YP_666630.1 CDS holB NC_008245.1 477143 478054 D Similar to Q8D3A6 HolB protein from Wigglesworthia glossinidia brevipalpis (329 aa). FASTA: opt: 315 Z-score: 378.8 E(): 3.3e-13 Smith-Waterman score: 315; 27.304 identity in 293 aa overlap; DNA polymerase III, delta prime subunit 477143..478054 Francisella tularensis subsp. tularensis FSC198 4200198 YP_666631.1 CDS yhbY NC_008245.1 478065 478343 D Similar to Q87LZ3 Putative RNA-binding protein containing KH domain from Vibrio parahaemolyticus (98 aa). FASTA: opt: 289 Z-score: 405.9 E(): 1e-14 Smith-Waterman score: 289; 52.222 identity in 90 aa overlap; RNA-binding protein 478065..478343 Francisella tularensis subsp. tularensis FSC198 4199104 YP_666632.1 CDS hemB NC_008245.1 478351 479325 D catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 478351..479325 Francisella tularensis subsp. tularensis FSC198 4200371 YP_666633.1 CDS yibK NC_008245.1 479329 479796 D Similar to Q8E8X2 RNA methyltransferase, TrmH family, group 2 from Shewanella oneidensis (154 aa). FASTA: opt: 569 Z-score: 759.8 E(): 2e-34 Smith-Waterman score: 569; 57.616 identity in 151 aa overlap; tRNA/rRNA methyltransferase 479329..479796 Francisella tularensis subsp. tularensis FSC198 4199107 YP_666634.1 CDS ansB NC_008245.1 479914 480978 D Similar to ASG2_HAEIN (P43843) Probable L-asparaginase periplasmic [Precursor] from Haemophilus influenzae (349 aa). FASTA: opt: 897 Z-score: 1034.7 E(): 9.6e-50 Smith-Waterman score: 897; 43.966 identity in 348 aa overlap. No signal peptide predicted; periplasmic L-asparaginase II 479914..480978 Francisella tularensis subsp. tularensis FSC198 4199425 YP_666635.1 CDS FTF0465 NC_008245.1 481702 481890 D ORF ftt0465; hypothetical protein 481702..481890 Francisella tularensis subsp. tularensis FSC198 4199017 YP_666636.1 CDS argS NC_008245.1 481942 483687 R catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase complement(481942..483687) Francisella tularensis subsp. tularensis FSC198 4199430 YP_666637.1 CDS ostA1 NC_008245.1 483813 486419 D Similar to OSTA_XYLFT (Q87AI9) Organic solvent tolerance protein from Xylella fastidiosa (792 aa). FASTA: opt: 700 Z-score: 808.7 E(): 3.7e-37 Smith-Waterman score: 775; 26.572 identity in 636 aa overlap; organic solvent tolerance protein 483813..486419 Francisella tularensis subsp. tularensis FSC198 4200087 YP_666638.1 CDS surA NC_008245.1 486401 487822 D Similar to Q8ZIK4 Survival protein SurA (Peptidyl-prolyl cis-trans isomerase) from Yersinia pestis (434 aa). FASTA: opt: 532 Z-score: 586.9 E(): 8.4e-25 Smith-Waterman score: 532; 25.176 identity in 425 aa overlap; peptidyl-prolyl cis-trans isomerase 486401..487822 Francisella tularensis subsp. tularensis FSC198 4199093 YP_666639.1 CDS ksgA NC_008245.1 487824 488612 D catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 487824..488612 Francisella tularensis subsp. tularensis FSC198 4199510 YP_666640.1 CDS apaH NC_008245.1 488624 489451 D hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; diadenosine tetraphosphatase 488624..489451 Francisella tularensis subsp. tularensis FSC198 4199426 YP_666641.1 CDS aroD NC_008245.1 489455 489892 D catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 489455..489892 Francisella tularensis subsp. tularensis FSC198 4199434 YP_666642.1 CDS accB NC_008245.1 489897 490370 D Similar to BCCP_PSEAE (P37799) Biotin carboxyl carrier protein of acetyl-CoA carboxylase from Pseudomonas aeruginosa (156 aa). FASTA: opt: 466 Z-score: 537.8 E(): 4.6e-22 Smith-Waterman score: 466; 48.148 identity in 162 aa overlap; Acetyl-CoA carboxylase, biotin carboxyl carrier protein subunit 489897..490370 Francisella tularensis subsp. tularensis FSC198 4199747 YP_666643.1 CDS accC NC_008245.1 490435 491790 D Similar to Q9KV62 Acetyl-CoA carboxylase, biotin carboxylase subunit from Vibrio cholerae (447 aa). FASTA: opt: 2119 Z-score: 2505.5 E(): 1.2e-131 Smith-Waterman score: 2119; 70.270 identity in 444 aa overlap; Acetyl-CoA carboxylase, biotin carboxylase subunit 490435..491790 Francisella tularensis subsp. tularensis FSC198 4199748 YP_666644.1 CDS FTF0474 NC_008245.1 491884 492564 D ORF ftt0474; hypothetical protein 491884..492564 Francisella tularensis subsp. tularensis FSC198 4199018 YP_666645.1 CDS msc NC_008245.1 492590 493708 D Similar to Q87G16 (Q87G16) Putative membrane protein from Vibrio parahaemolyticus (365 aa). FASTA: opt: 362 Z-score: 432.0 E(): 3.6e-16 Smith-Waterman score: 412; 29.167 identity in 384 aa overlap; mechanosensitive ion channel protein 492590..493708 Francisella tularensis subsp. tularensis FSC198 4200099 YP_666646.1 CDS poxA NC_008245.1 493713 494636 R Similar to Q83AR3 (Q83AR3) Lysyl-tRNA synthetase-related protein from Coxiella burnetii (321 aa). FASTA: opt: 727 Z-score: 890.9 E(): 9.9e-42 Smith-Waterman score: 727; 42.088 identity in 297 aa overlap; lysyl-tRNA synthetase complement(493713..494636) Francisella tularensis subsp. tularensis FSC198 4199741 YP_666647.1 CDS birA NC_008245.1 494633 495415 R Similar to Q83CV0 BirA bifunctional protein from Coxiella burnetii (323 aa). FASTA: opt: 375 Z-score: 457.7 E(): 1.3e-17 Smith-Waterman score: 375; 31.004 identity in 229 aa overlap; transcription repressor BirA complement(494633..495415) Francisella tularensis subsp. tularensis FSC198 4200309 YP_666648.1 CDS recJ NC_008245.1 495412 497154 R Similar to RECJ_HAEIN (P45112) single-stranded-DNA-specific exonuclease from Haemophilus influenzae (575 aa). FASTA: opt: 869 Z-score: 996.6 E(): 1.3e-47 Smith-Waterman score: 902; 32.028identity in 562 aa overlap; single-stranded-DNA-specific exonuclease complement(495412..497154) Francisella tularensis subsp. tularensis FSC198 4200605 YP_666649.1 CDS perM NC_008245.1 497148 498254 R Similar to Q9I4W6 Hypothetical protein PA1007 from Pseudomonas aeruginosa (357 aa). FASTA: opt: 1016 Z-score: 1092.5 E(): 5.8e-53 Smith-Waterman score: 1016; 40.698 identity in 344 aa overlap; PerM family protein complement(497148..498254) Francisella tularensis subsp. tularensis FSC198 4199241 YP_666650.1 CDS xasA NC_008245.1 498356 499765 R Similar to Q8YBJ1 Glutamate:gamma-aminobutyrate antiporter from Brucella melitensis (510 aa). FASTA: opt: 983 Z-score: 1079.5 E(): 3.1e-52 Smith-Waterman score: 983; 34.698 identity in 464 aa overlap; glutamate:gamma-aminobutyric acid antiporter family protein complement(498356..499765) Francisella tularensis subsp. tularensis FSC198 4200692 YP_666651.1 CDS potF NC_008245.1 499849 501030 D Similar to Q92RX4 Probable putrescine-binding periplasmic protein from Rhizobium meliloti (364 aa). FASTA: opt: 847 Z-score: 993.2 E(): 2e-47 Smith-Waterman score: 847; 35.714 identity in 350 aa overlap; putrescine-binding periplasmic protein 499849..501030 Francisella tularensis subsp. tularensis FSC198 4199737 YP_666652.1 CDS FTF0482c NC_008245.1 501283 502098 R ORF ftt0482c; lipoprotein complement(501283..502098) Francisella tularensis subsp. tularensis FSC198 4199019 YP_666653.1 CDS FTF0483c NC_008245.1 502317 503204 R Similar to AAP95905 (AAP95905) Hypothetical protein from Haemophilus ducreyi 35000HP (342 aa). FASTA: opt: 686 Z-score: 815.5 E(): 1.6e-37 Smith-Waterman score: 686; 40.678 identity in 295 aa overlap ORF ftt0483c; hypothetical protein complement(502317..503204) Francisella tularensis subsp. tularensis FSC198 4199020 YP_666654.1 CDS FTF0484 NC_008245.1 503358 504077 D ORF ftt0484; hypothetical protein 503358..504077 Francisella tularensis subsp. tularensis FSC198 4199021 YP_666655.1 CDS FTF0485 NC_008245.1 504145 504807 D ORF ftt0485; hypothetical protein 504145..504807 Francisella tularensis subsp. tularensis FSC198 4199022 YP_666656.1 CDS mutL NC_008245.1 504815 506617 D Similar to MUTL_RICPR (Q9ZC88) DNA mismatch repair protein mutL from Rickettsia prowazekii (595 aa). FASTA: opt: 1236 Z-score: 1435.6 E(): 4.5e-72 Smith-Waterman score: 1236; 37.291 identity in 598 aa overlap; DNA mismatch repair protein 504815..506617 Francisella tularensis subsp. tularensis FSC198 4200112 YP_666657.1 CDS FTF0487 NC_008245.1 506974 507708 D Similar to Q83AI9 Membrane protein,putative from Coxiella burnetii (401 aa). FASTA: 306 opt: 370 Z-score: 417.4 E(): 2.3e-15 Smith-Waterman score: 370; 30.342 identity in 234 aa overlap ORF ftt0487; hypothetical protein 506974..507708 Francisella tularensis subsp. tularensis FSC198 4199023 YP_666658.1 CDS FTF0488c NC_008245.1 507715 508848 R Similar to Q83BM0 Major facilitator family transporter from Coxiella burnetii (428 aa). FASTA: opt: 319 Z-score: E(): 3.7e-11 Smith-Waterman score: 319; 21.951 identity in 369 aa overlap ORF ftt0488c; major facilitator transporter complement(507715..508848) Francisella tularensis subsp. tularensis FSC198 4199024 YP_666659.1 CDS trxB NC_008245.1 508990 509940 R Similar to Q8ZGC9 Thioredoxin reductase from Yersinia pestis (320 aa). FASTA: opt: 1525 Z-score: 1798.2 E(): 2.9e-92 Smith-Waterman score: 1525; 70.927 identity in 313 aa overlap; thioredoxin reductase complement(508990..509940) Francisella tularensis subsp. tularensis FSC198 4198971 YP_666660.1 CDS FTF0490c NC_008245.1 510032 511249 R Similar Q888K0 Phospholipase D family protein from Pseudomonas syringae (pv. tomato) (422 aa). FASTA: opt: 440 Z-score: 514.4 E(): 9.2e-21 Smith-Waterman score: 440; 25.840 identity in 387 aa overlap ORF ftt0490c; phospholipase D complement(510032..511249) Francisella tularensis subsp. tularensis FSC198 4199025 YP_666661.1 CDS gph NC_008245.1 511292 511966 R Similar to Q82SZ4 Phosphoglycolate phosphatase from Nitrosomonas europaea (240 aa). FASTA: opt: 432 Z-score: 532.2 E(): 9.4e-22 Smith-Waterman score: 432; 33.486 identity in 218 aa overlap; phosphoglycolate phosphatase complement(511292..511966) Francisella tularensis subsp. tularensis FSC198 4200293 YP_666662.1 CDS lysR NC_008245.1 512007 512933 R Similar to Q87J66 Transcriptional regulator, LysR family from Vibrio parahaemolyticus (311 aa). FASTA: opt: 675 Z-score: 768.6 E(): 6.4e-35 Smith-Waterman score: 675; 33.115 identity in 305 aa overlap; LysR family transcriptional regulator complement(512007..512933) Francisella tularensis subsp. tularensis FSC198 4199654 YP_666663.1 CDS cutC NC_008245.1 514232 514954 R Similar Q9CNA6 Hypothetical protein PM0526 from Pasteurella multocida (244 aa). FASTA: opt: 521 Z-score: 651.2 E(): 2.2e-28 Smith-Waterman score: 521; 40.175 identity in 229 aa overlap; CutC family protein complement(514232..514954) Francisella tularensis subsp. tularensis FSC198 4200281 YP_666664.1 CDS FTF0495 NC_008245.1 515287 515790 D Similar to Q9K0Q8 Hypothetical protein NMB0526 from Neisseria meningitidis (serogroup B) (172 aa). FASTA: opt: 455 Z-score: 573.9 E(): 4.5e-24 Smith-Waterman score: 455; 42.353 identity in 170 aa overlap ORF ftt0495; hypothetical protein 515287..515790 Francisella tularensis subsp. tularensis FSC198 4199027 YP_666665.1 CDS FTF0496 NC_008245.1 515796 516560 D Similar to Q935B8 Hypothetical protein HCM2.0044c from Salmonella typhi (251 aa). FASTA: opt: 242 Z-score: 297.7 E(): 1.1e-08 Smith-Waterman score: 296; 28.000 identity in 250 aa overlap ORF ftt0496; hypothetical protein 515796..516560 Francisella tularensis subsp. tularensis FSC198 4199028 YP_666666.1 CDS FTF0499 NC_008245.1 519151 519873 D Similar to Q8ZA05 Hypothetical protein YPO4021 from Yersinia pestis (414 aa). FASTA: opt: 230 Z-score: 284.7 E(): 5.7e-08 Smith-Waterman score: 230; 24.779 identity in 226 aa overlap ORF ftt0499; hypothetical protein 519151..519873 Francisella tularensis subsp. tularensis FSC198 4199385 YP_666667.1 CDS FTF0500 NC_008245.1 520103 520363 D ORF ftt0500; hypothetical protein 520103..520363 Francisella tularensis subsp. tularensis FSC198 4199386 YP_666668.1 CDS FTF0501c NC_008245.1 520495 521535 R Similar to Q9I0I7 Hypothetical protein PA2651 from Pseudomonas aeruginosa (352 aa). FASTA: opt: 382 Z-score: 397.1 E(): 3.2e-14 Smith-Waterman score: 382; 26.686 identity in 341 aa overlap ORF ftt0501c; hypothetical protein complement(520495..521535) Francisella tularensis subsp. tularensis FSC198 4199387 YP_666669.1 CDS FTF0502c NC_008245.1 521919 522344 R ORF ftt0502c; hypothetical protein complement(521919..522344) Francisella tularensis subsp. tularensis FSC198 4199388 YP_666670.1 CDS sucD NC_008245.1 522456 523328 R Similar to Q9JUS9 Putative succinyl-CoA synthetase alpha from Neisseria meningitidis (serogroup A) (296 aa). FASTA: opt: 1574 Z-score: 1817.5 E(): 2.4e-93 Smith-Waterman score: 1574; 81.661identity in 289 aa overlap; succinyl-CoA synthetase, alpha subunit complement(522456..523328) Francisella tularensis subsp. tularensis FSC198 4199090 YP_666671.1 CDS sucC NC_008245.1 523360 524523 R catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta complement(523360..524523) Francisella tularensis subsp. tularensis FSC198 4199089 YP_666672.1 CDS FTF0505 NC_008245.1 524693 526606 D ORF ftt0505; hypothetical protein 524693..526606 Francisella tularensis subsp. tularensis FSC198 4199389 YP_666673.1 CDS FTF0506c NC_008245.1 526614 526928 R ORF ftt0506c; hypothetical protein complement(526614..526928) Francisella tularensis subsp. tularensis FSC198 4199390 YP_666674.1 CDS FTF0507 NC_008245.1 527587 528354 D Similar to Q9X610 BcfH from Salmonella typhimurium (269 aa). FASTA: opt: 305 Z-score: 371.4 E(): 8.5e-13 Smith-Waterman score: 305; 31.122 identity in 196 aa overlap ORF ftt0507; lipoprotein 527587..528354 Francisella tularensis subsp. tularensis FSC198 4199391 YP_666675.1 CDS dusA NC_008245.1 528361 529344 R Similar to Y926_SYNY3 (P72872) Hypothetical protein sll0926 from Synechocystis sp. (strain PCC 6803) (334 aa). FASTA: opt: 1129 Z-score: 1337.0 E(): 1.4e-66 Smith-Waterman score: 1129; 51.911 identity in 314 aa overlap; tRNA-dihydrouridine synthase A complement(528361..529344) Francisella tularensis subsp. tularensis FSC198 4199362 YP_666676.1 CDS FTF0509c NC_008245.1 529378 530178 R Similar to Q8DBN3 Conserved hypothetical protein from Vibrio vulnificus (184 aa). FASTA: opt: 275 Z-score: 356.8 E(): 5.5e-12 Smith-Waterman score: 275; 30.208 identity in 192 aa overlap ORF ftt0509c; hypothetical protein complement(529378..530178) Francisella tularensis subsp. tularensis FSC198 4199392 YP_666677.1 CDS gyrB NC_008245.1 530354 532771 D Similar to GYRB_SALTY (Q60008) DNA gyrase subunit B from Salmonella typhimurium (803 aa). FASTA: opt: 3370 Z-score: 3873.3 E(): 7.5e-208 Smith-Waterman score: 3370; 63.321 identity in 807 aa overlap; DNA gyrase subunit B 530354..532771 Francisella tularensis subsp. tularensis FSC198 4200368 YP_666678.1 CDS FTF0511 NC_008245.1 532901 533764 D with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate; pyridoxal biosynthesis lyase PdxS 532901..533764 Francisella tularensis subsp. tularensis FSC198 4199393 YP_666679.2 CDS FTF0512 NC_008245.1 533767 534306 D with PdxST is involved in the biosynthesis of pyridoxal 5'-phosphate; PdxT catalyzes the hydrolysis of glutamine to glutamate and ammonia; PdxS utilizes the ammonia to synthesize pyridoxal 5'-phosphate; glutamine amidotransferase subunit PdxT 533767..534306 Francisella tularensis subsp. tularensis FSC198 4199394 YP_666680.1 CDS isftu1 NC_008245.1 534410 535194 R ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and also mariner elements, show that this transposase shares strongly conserved residues, including a fully conserved dipeptide,Asp-Glu (DE), and a block consisting of a fully conserved Asp and highly conserved Glu, separated by 34 or 35 residues (D35E). The conserved dipeptide is only present if ribosomal frameshifting occurs.; transposase complement(join(534410..534868,534868..535194)) Francisella tularensis subsp. tularensis FSC198 4199630 YP_666681.1 CDS FTF0515 NC_008245.1 536411 536587 D ORF ftt0515; hypothetical protein 536411..536587 Francisella tularensis subsp. tularensis FSC198 4199395 YP_666682.1 CDS prmA NC_008245.1 541265 542110 D Similar to Q9CLW2 PrmA (Ribosomal protein L11 methyltransferase) from Pasteurella multocida (293 aa). FASTA: opt: 572 Z-score: 685.5 E(): 2.7e-30 Smith-Waterman score: 580; 33.677 identity in 291 aa overlap; 50S ribosomal protein L11 methyltransferase 541265..542110 Francisella tularensis subsp. tularensis FSC198 4199942 YP_666683.1 CDS FTF0519 NC_008245.1 542100 543083 D Similar to Q9KGG5 Transcriptional regulator involved in nitrogen regulation, NifR3/Smm1 family from Bacillus halodurans (334 aa). FASTA: opt: 1134 Z-score: 1336.1 E(): 1.6e-66 Smith-Waterman score: 1134; 52.484 identity in 322 aa overlap ORF ftt0519; Nif3 family protein 542100..543083 Francisella tularensis subsp. tularensis FSC198 4199398 YP_666684.1 CDS FTF0520 NC_008245.1 543313 543906 D ORF ftt0520; hypothetical protein 543313..543906 Francisella tularensis subsp. tularensis FSC198 4199399 YP_666685.1 CDS FTF0522 NC_008245.1 544433 545410 D Similar to Q8EGY1 Type I restriction-modification system, M subunit, putative from Shewanella oneidensis (684 aa). FASTA: opt: 278 Z-score: 287.3 E(): 4.1e-08 Smith-Waterman score: 291; 31.081 identity in 222 aa overlap ORF ftt0522; hypothetical protein 544433..545410 Francisella tularensis subsp. tularensis FSC198 4199056 YP_666686.1 CDS FTF0523 NC_008245.1 545535 546761 D Similar to Q89Z57 Type I restriction enzyme EcoAI specificity protein from Bacteroides thetaiotamicron (474 aa). FASTA: opt: 208 Z-score: 239.0 E(): 2e-05 Smith-Waterman score: 246; 24.363 identity in 353 aa overlap ORF ftt0523; hypothetical protein 545535..546761 Francisella tularensis subsp. tularensis FSC198 4199057 YP_666687.1 CDS FTF0524 NC_008245.1 547003 547389 D Similar to Q8KBB0 Hypothetical protein CT1879 from Chlorobium tepidum (193 aa). FASTA: opt: 467 Z-score: 629.2 E(): 3.7e-27 Smith-Waterman score: 467; 60.656 identity in 122 aa overlap ORF ftt0524; hypothetical protein 547003..547389 Francisella tularensis subsp. tularensis FSC198 4199058 YP_666688.1 CDS FTF0525 NC_008245.1 547436 548092 D Similar to RA50_THEVO DNA double-strand break repair rad50 ATPase from Thermoplasma volcanicum (895 aa). FASTA: opt: 188 Z-score: 215.6 E(): 0.0004 Smith-Waterman score: 188; 25.926 identity in 216 aa overlap. Similarity to N terminal domain ORF ftt0525; hypothetical protein 547436..548092 Francisella tularensis subsp. tularensis FSC198 4199059 YP_666689.1 CDS FTF0526 NC_008245.1 548098 548304 D ORF ftt0526; hypothetical protein 548098..548304 Francisella tularensis subsp. tularensis FSC198 4199060 YP_666690.1 CDS FTF0527 NC_008245.1 548325 549128 D ORF ftt0527; hypothetical protein 548325..549128 Francisella tularensis subsp. tularensis FSC198 4199061 YP_666691.1 CDS FTF0528 NC_008245.1 549125 549502 D ORF ftt0528; hypothetical protein 549125..549502 Francisella tularensis subsp. tularensis FSC198 4199062 YP_666692.1 CDS FTF0530c NC_008245.1 550577 551179 R Similar to Q97FB4 Intracellular protease/amidase related enzyme from Clostridium acetobutylicum (201 aa). FASTA: opt: 703 Z-score: 884.5 E(): 2.2e-41 Smith-Waterman score: 703; 51.531 identity in 196 aa overlap ORF ftt0530c; DJ-1/PfpI family protein complement(550577..551179) Francisella tularensis subsp. tularensis FSC198 4199063 YP_666693.1 CDS grxC NC_008245.1 553181 554413 R Similar to (glutaredoxin 3) Q8ZJM8 Glutaredoxin 3 from Yersinia pestis (82 aa). FASTA: opt: 181 Z-score: 263.7 E(): 8.5e-07 Smith-Waterman score: 181; 40.260 identity in 77 aa overlap,(ribonucleoside-diphosphate reductase) Q8QYZ8 Ribonucleoside-diphosphate reductase,beta subunit-like protein from Rana tigrina ranavirus (387 aa). FASTA: opt: 1124 Z-score: 1382.6 E(): 4.1e-69 Smith-Waterman score: 1124; 51.703 identity in 323 aa overlap; bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta complement(553181..554413) Francisella tularensis subsp. tularensis FSC198 4200303 YP_666694.1 CDS grxA NC_008245.1 554420 554680 R Similar to GLR1_ECOLI (P00277) Glutaredoxin 1 from Escherichia coli (85 aa). FASTA: opt: 191 Z-score: 274.9 E(): 2e-07 Smith-Waterman score: 191; 40.000identity in 80 aa overlap; glutaredoxin complement(554420..554680) Francisella tularensis subsp. tularensis FSC198 4200301 YP_666695.1 CDS nrdA NC_008245.1 554684 556456 R Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha complement(554684..556456) Francisella tularensis subsp. tularensis FSC198 4200242 YP_666696.1 CDS mdh NC_008245.1 556660 557619 R Catalyzes the reversible oxidation of malate to oxaloacetate; malate dehydrogenase complement(556660..557619) Francisella tularensis subsp. tularensis FSC198 4199663 YP_666697.1 CDS FTF0536 NC_008245.1 557767 558282 D ORF ftt0536; hypothetical protein 557767..558282 Francisella tularensis subsp. tularensis FSC198 4199065 YP_666698.1 CDS FTF0537 NC_008245.1 558298 558933 D Similar to Q8PD67 Ubiquinone biosynthesis protein from Xanthomonas campestris (217 aa). FASTA: opt: 710 Z-score: 878.4 E(): 4.9e-41 Smith-Waterman score: 710; 51.887 identity in 212 aa overlap (2-211:8-217) ORF ftt0537; ubiquinone biosynthesis protein 558298..558933 Francisella tularensis subsp. tularensis FSC198 4199066 YP_666699.1 CDS FTF0538c NC_008245.1 558942 559511 R Similar to Q87LS3 Hypothetical protein from Vibrio parahaemolyticus (203 aa). FASTA: opt: 267 Z-score: 350.1 E(): 1.3e-11 Smith-Waterman score: 320; 31.795 identity in 195 aa overlap ORF ftt0538c; lipoprotein complement(558942..559511) Francisella tularensis subsp. tularensis FSC198 4199067 YP_666700.1 CDS FTF0540c NC_008245.1 560336 561826 R ORF ftt0540c; hypothetical protein complement(560336..561826) Francisella tularensis subsp. tularensis FSC198 4199069 YP_666701.1 CDS yqaB NC_008245.1 561881 562480 R Similar to YQAB_ECOLI (P77475) Hypothetical protein yqaB from Escherichia coli (188 aa). FASTA: opt: 336 Z-score: 422.2 E(): 1.3e-15 Smith-Waterman score: 336; 33.889 identity in 180 aa overlap; haloacid dehalogenase complement(561881..562480) Francisella tularensis subsp. tularensis FSC198 4199034 YP_666702.1 CDS FTF0543 NC_008245.1 563221 564597 D ORF ftt0543; hypothetical protein 563221..564597 Francisella tularensis subsp. tularensis FSC198 4199071 YP_666703.1 CDS phnA NC_008245.1 564703 565035 D Similar to PHNA_ECOLI PhnA protein from Escherichia coli (111 aa). FASTA: opt: 521 Z-score: 674.6 E(): 1.1e-29 Smith-Waterman score: 521; 66.972identity in 109 aa overlap; phosphonoacetate hydrolase 564703..565035 Francisella tularensis subsp. tularensis FSC198 4199726 YP_666704.1 CDS FTF0545 NC_008245.1 565041 565256 D ORF ftt0545; hypothetical protein 565041..565256 Francisella tularensis subsp. tularensis FSC198 4199072 YP_666705.1 CDS FTF0546 NC_008245.1 565260 565871 D ORF ftt0546; hypothetical protein 565260..565871 Francisella tularensis subsp. tularensis FSC198 4199073 YP_666706.1 CDS FTF0547 NC_008245.1 566226 566759 D ORF ftt0547; hypothetical protein 566226..566759 Francisella tularensis subsp. tularensis FSC198 4199074 YP_666707.1 CDS dnaQ NC_008245.1 566811 567503 D Similar to Q83EK2 DNA polymerase III, epsilon subunit from Coxiella burnetii (232 aa). FASTA: opt: 699 Z-score: 870.8 E(): 1.3e-40 Smith-Waterman score: 699; 49.550 identity in 222 aa overlap; DNA polymerase III subunit epsilon 566811..567503 Francisella tularensis subsp. tularensis FSC198 4199358 YP_666708.1 CDS vanY NC_008245.1 567497 567970 D Similar to Q87AM4 Peptidase (202 aa). FASTA: opt: 481 Z-score: 603.7 E(): 9.8e-26 Smith-Waterman score: 481; 50.000 identity in 142 aa overlap; D-alanyl-D-alanine carboxypeptidase 567497..567970 Francisella tularensis subsp. tularensis FSC198 4200139 YP_666709.1 CDS FTF0550 NC_008245.1 567930 569366 D Similar to Q8EHZ3 TPR domain protein from Shewanella oneidensis (466 aa). FASTA: opt: 304 Z-score: 346.2 E(): 2.2e-11 Smith-Waterman score: 331; 23.333 identity) in 480 aa overlap ORF ftt0550; hypothetical protein 567930..569366 Francisella tularensis subsp. tularensis FSC198 4199075 YP_666710.1 CDS FTF0552 NC_008245.1 570799 572295 D Similar to Q8P9Q7 Aldehyde dehydrogenase from Xanthomonas campestris (510 aa). FASTA: opt: 1972 Z-score: 2329.9 E(): 6.9e-122 Smith-Waterman score: 1972; 60.285 identity in 491 aa overlap ORF ftt0552; aldehyde dehydrogenase 570799..572295 Francisella tularensis subsp. tularensis FSC198 4200384 YP_666711.1 CDS FTF0553 NC_008245.1 572300 573079 D Similar to Q8EJ53 Conserved hypothetical protein from Shewanella oneidensis (267 aa). FASTA: opt: 859 Z-score: 1057.9 E(): 4.9e-51 Smith-Waterman score: 859; 52.809 identity in 267 aa overlap ORF ftt0553; hypothetical protein 572300..573079 Francisella tularensis subsp. tularensis FSC198 4200385 YP_666712.1 CDS FTF0554 NC_008245.1 573163 573435 D Similar to Q99SH0 Hypothetical protein SAV2087 from Stafylococcus aureus (97 aa). FASTA: opt: 243 Z-score: 331.6 E(): 1.4e-10 Smith-Waterman score: 243; 45.455 identity in 77 aa overlap ORF ftt0554; hypothetical protein 573163..573435 Francisella tularensis subsp. tularensis FSC198 4200386 YP_666713.1 CDS FTF0555 NC_008245.1 573449 574180 D Similar to Q930P5 Hypothetical protein RA0150 from Rhizobium meliloti (262 aa). FASTA: opt: 924 Z-score: 1048.2 E(): 1.7e-50 Smith-Waterman score: 924; 54.202 identity in 238 aa overlap. Some similarity to glutaredoxin ORF ftt0555; hypothetical protein 573449..574180 Francisella tularensis subsp. tularensis FSC198 4200387 YP_666714.1 CDS oxyR NC_008245.1 574183 575052 R Similar to O06466 Oxidative stress transcriptional regulator from Xanthomonas campestris (313 aa). FASTA: opt: 707 Z-score: 842.2 E(): 5.1e-39 Smith-Waterman score: 707; 36.207 identity in 290 aa overlap; oxidative stress transcriptional regulator complement(574183..575052) Francisella tularensis subsp. tularensis FSC198 4200089 YP_666715.1 CDS FTF0557 NC_008245.1 575150 575674 D Similar to Q92MY1 Hypothetical protein R02467 from Rhizobium meliloti (180 aa). FASTA: opt: 821 Z-score: 1055.0 E(): 7.2e-51 Smith-Waterman score: 821; 66.092 identity in 174 aa overlap ORF ftt0557; AhpC/TSA family protein 575150..575674 Francisella tularensis subsp. tularensis FSC198 4200388 YP_666716.1 CDS FTF0558 NC_008245.1 575677 576288 D Similar to Q8XU62 Hypothetical protein RSc3331 from Ralstonia solanacearum (201 aa). FASTA: opt: 602 Z-score: 724.0 E(): 2e-32 Smith-Waterman score: 602; 48.020 identity in 202 aa overlap ORF ftt0558; short chain dehydrogenase 575677..576288 Francisella tularensis subsp. tularensis FSC198 4200389 YP_666717.1 CDS cmk NC_008245.1 576305 576970 R Similar to KCY_PASMU (P57875) Cytidylate kinase from Pasteurella multocida (227 aa). FASTA: opt: 748 Z-score: 879.9 E(): 4.1e-41 Smith-Waterman score: 748; 53.425 identity in 219 aa overlap; cytidylate kinase complement(576305..576970) Francisella tularensis subsp. tularensis FSC198 4200269 YP_666718.1 CDS serC NC_008245.1 576957 578009 R catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase complement(576957..578009) Francisella tularensis subsp. tularensis FSC198 4200742 YP_666719.1 CDS isftu1 NC_008245.1 578329 579113 D ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and also mariner elements, show that this transposase shares strongly conserved residues, including a fully conserved dipeptide,Asp-Glu (DE), and a block consisting of a fully conserved Asp and highly conserved Glu, separated by 34 or 35 residues (D35E). The conserved dipeptide is only present if ribosomal frameshifting occurs.; transposase join(578329..578655,578655..579113) Francisella tularensis subsp. tularensis FSC198 4199631 YP_666720.1 CDS potG NC_008245.1 579495 580616 D Similar to Q8EHF2 Polyamine ABC transporter,ATP-binding protein from Shewanella oneidensis (378 aa). FASTA: opt: 1366 Z-score: 1557.5 E(): 7.3e-79 Smith-Waterman score: 1366; 55.496 identity in 373 aa overlap; polyamine transporter, ABC transporter,ATP-binding protein 579495..580616 Francisella tularensis subsp. tularensis FSC198 4199738 YP_666721.1 CDS potH NC_008245.1 580580 581497 D Similar to Q8FJE8 Putrescine transport system permease protein from Escherichia coli (314 aa). FASTA: opt: 949 Z-score: 1040.4 E(): 4.7e-50 Smith-Waterman score: 949; 43.878 identity in 294 aa overlap; polyamine transporter, subunit H, ABC transporter, membrane protein 580580..581497 Francisella tularensis subsp. tularensis FSC198 4199739 YP_666722.1 CDS potI NC_008245.1 581511 582317 D Similar to Q8EHF0 Polyamine ABC transporter,permease protein from Shewanella oneidensis (271 aa). FASTA: opt: 873 Z-score: 1010.7 E(): 2.1e-48 Smith-Waterman score: 873; 46.241 identity in 266 aa overlap; polyamine transporter, subunit I, ABC transporter, membrane protein 581511..582317 Francisella tularensis subsp. tularensis FSC198 4199740 YP_666723.1 CDS isftu2 NC_008245.1 582461 583204 R ISFtu2. Transposase, member of the IS5 family. Identical to Q8GM03 putative transposase from Francisella tularensis (247 aa).; transposase complement(582461..583204) Francisella tularensis subsp. tularensis FSC198 4199288 YP_666724.1 CDS FTF0566 NC_008245.1 583350 583616 D ORF ftt0566; hypothetical protein 583350..583616 Francisella tularensis subsp. tularensis FSC198 4200390 YP_666725.1 CDS FTF0568 NC_008245.1 585822 586472 D Similar to Q26545 Phosphoserine phosphohydrolase-like protein trans-spliced from Schistosoma mansoni (223 aa). FASTA: opt: 319 Z-score: 380.8 E(): 2.5e-13 Smith-Waterman score: 319; 29.493 identity in 217 aa overlap. Similar to eukaryotic proteins. Historical HGT-event? ORF ftt0568; hypothetical protein 585822..586472 Francisella tularensis subsp. tularensis FSC198 4200392 YP_666726.1 CDS FTF0569c NC_008245.1 586461 587483 R Similar to Q8P3T2 Integral membrane protein from Xanthomonas campestris (347 aa). FASTA: opt: 906 Z-score: 1071.1 E(): 9e-52 Smith-Waterman score: 906; 41.739 identity in 345 aa overlap ORF ftt0569c; hypothetical protein complement(586461..587483) Francisella tularensis subsp. tularensis FSC198 4200393 YP_666727.1 CDS FTF0570 NC_008245.1 587563 587961 D ORF ftt0570; hypothetical protein 587563..587961 Francisella tularensis subsp. tularensis FSC198 4200394 YP_666728.1 CDS FTF0571 NC_008245.1 587973 588680 D Partially similar to Q96F61 Hypothetical protein from Homo sapiens (409 aa). FASTA: opt: 403 Z-score: 516.3 E(): 7.3e-21 Smith-Waterman score: 403; 34.171 identity in 199 aa overlap ORF ftt0571; hypothetical protein 587973..588680 Francisella tularensis subsp. tularensis FSC198 4200395 YP_666729.1 CDS FTF0572 NC_008245.1 588805 590259 D Similar to Q8Z269 Putative PTR2 family transport protein from Salmonella typhi (489 aa). FASTA: opt: 729 Z-score: 778.1 E(): 1.9e-35 Smith-Waterman score: 770; 30.524identity in 439 aa overlap ORF ftt0572; proton-dependent oligopeptide transport (POT) family protein 588805..590259 Francisella tularensis subsp. tularensis FSC198 4200396 YP_666730.1 CDS alr NC_008245.1 590310 591407 D Similar to Q81EB9 Alanine racemase from Bacillus cereus (408 aa). FASTA: opt: 573 Z-score: 679.1 E(): 6.2e-30 Smith-Waterman score: 573; 29.863 identity in 365 aa overlap; alanine racemase 590310..591407 Francisella tularensis subsp. tularensis FSC198 4199760 YP_666731.1 CDS pheA NC_008245.1 593182 594024 D Similar to Q8KBW6 Prephenate dehydratase from chlorobium tepidum (280 aa). FASTA: opt: 624 Z-score: 792.7 E(): 2.9e-36 Smith-Waterman score: 624; 38.489 identity in 278 aa overlap; prephenate dehydratase 593182..594024 Francisella tularensis subsp. tularensis FSC198 4199246 YP_666732.1 CDS FTF0576 NC_008245.1 594050 594718 D Similar to Q894N2 Putative zinc metallopeptidase from Clostridium tetani (236 aa). FASTA: opt: 434 Z-score: 526.0 E(): 2.1e-21 Smith-Waterman score: 434; 36.245 identity in 229 aa overlap ORF ftt0576; hypothetical protein 594050..594718 Francisella tularensis subsp. tularensis FSC198 4200398 YP_666733.1 CDS sdaA NC_008245.1 594774 596147 D Similar to Q8EEW4 L-serine dehydratase 1 from Shewanella oneidensis (458 aa). FASTA: opt: 1442 Z-score: 1806.4 E(): 1e-92 Smith-Waterman score: 1442; 48.922 identity in 464 aa overlap; L-serine dehydratase 1 594774..596147 Francisella tularensis subsp. tularensis FSC198 4200726 YP_666734.1 CDS csdB NC_008245.1 596250 597473 D Similar to Q8ZDZ4 Putative selenocysteine lyase from Yersinia pestis (406 aa). FASTA: opt: 1343 Z-score: 1645.0 E(): 9.9e-84 Smith-Waterman score: 1343; 48.507 identity in 402 aa overlap; selenocysteine lyase 596250..597473 Francisella tularensis subsp. tularensis FSC198 4200277 YP_666735.1 CDS FTF0579 NC_008245.1 597494 597850 D Similar to AAP95950 HesB family protein from Haemophilus ducreyi (107 aa). FASTA: opt: 288 Z-score: 392.8 E(): 5.5e-14 Smith-Waterman score: 288; 41.121 identity in 107 aa overlap ORF ftt0579; hesB family protein 597494..597850 Francisella tularensis subsp. tularensis FSC198 4200399 YP_666736.1 CDS FTF0580 NC_008245.1 597864 598415 D Similar to Q83BY3 Hypothetical protein from Coxiella burnetii (180 aa). FASTA: opt: 593 Z-score: 750.6 E(): 6.4e-34 Smith-Waterman score: 593; 48.045 identity in 179 aa overlap ORF ftt0580; hypothetical protein 597864..598415 Francisella tularensis subsp. tularensis FSC198 4200400 YP_666737.1 CDS coaD NC_008245.1 598427 598915 D Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 598427..598915 Francisella tularensis subsp. tularensis FSC198 4200270 YP_666738.1 CDS fdx NC_008245.1 598920 599165 D ferredoxin. Identical to Q47937 Ferredoxin from Francisella novicida. Similar to Q88AH4 Ferredoxin from pseudomonas syringae (83 aa). FASTA: opt: 431 Z-score: 563.2 E(): 1.8e-23 Smith-Waterman score: 431; 65.432 identity in 81 aa overlap; ferredoxin 598920..599165 Francisella tularensis subsp. tularensis FSC198 4199407 YP_666739.1 CDS fopA1 NC_008245.1 599272 600453 D No transmembrane helix predicted; outer membrane associated protein 599272..600453 Francisella tularensis subsp. tularensis FSC198 4199419 YP_666740.1 CDS FTF0584 NC_008245.1 601115 604486 D ORF ftt0584; hypothetical protein 601115..604486 Francisella tularensis subsp. tularensis FSC198 4200457 YP_666741.1 CDS FTF0586 NC_008245.1 605855 606433 D Similar to Q9YCL9 Hypothetical protein APE1239 from Aeropyrum pernix (221 aa). FASTA: opt: 238 Z-score: 303.8 E(): 5e-09 Smith-Waterman score: 238; 25.683 identity in 183 aa overlap. Weakly conserved. ORF ftt0586; hypothetical protein 605855..606433 Francisella tularensis subsp. tularensis FSC198 4200459 YP_666742.1 CDS isftu2 NC_008245.1 606857 607600 R ISFtu2. Transposase, member of the IS5 family. Identical to Q8GM03 putative transposase from Francisella tularensis (247 aa).; transposase complement(606857..607600) Francisella tularensis subsp. tularensis FSC198 4199289 YP_666743.1 CDS aroA NC_008245.1 607763 609040 D Similar to AROA_VIBPA (Q87QX9) 3-phosphoshikimate 1-carboxyvinyltransferase from Vibrio parahaemolyticus (426 aa). FASTA: opt: 928 Z-score: 1157.4 E(): 1.4e-56 Smith-Waterman score: 928; 36.916 identity in 428 aa overlap; 3-phosphoshikimate 1-carboxyvinyltransferase 607763..609040 Francisella tularensis subsp. tularensis FSC198 4199431 YP_666744.1 CDS FTF0589 NC_008245.1 609043 609633 D ORF ftt0589; hypothetical protein 609043..609633 Francisella tularensis subsp. tularensis FSC198 4200460 YP_666745.1 CDS rnhA NC_008245.1 609584 610066 D Similar to RNH_PSEAE (Q9I2S9) Ribonuclease H from Pseudomonas aeruginosa (148 aa). FASTA: opt: 673 Z-score: 830.4 E(): 2.3e-38 Smith-Waterman score: 673; 62.937 identity in 143 aa overlap; ribonuclease H 609584..610066 Francisella tularensis subsp. tularensis FSC198 4200766 YP_666746.1 CDS ansA NC_008245.1 610068 611105 D Similar to Q8EEG1 L-asparaginase I from Shewanella oneidensis (337 aa). FASTA: opt: 1041 Z-score: 1293.4 E(): 3.7e-64 Smith-Waterman score: 1041; 49.258identity in 337 aa overlap; L-asparaginase 610068..611105 Francisella tularensis subsp. tularensis FSC198 4199424 YP_666747.1 CDS cynT NC_008245.1 611176 611862 D Similar to Q87AM3 Carbonic anhydrase from xylella fastidiosa (220 aa). FASTA: opt: 577 Z-score: 733.9 E(): 5.5e-33 Smith-Waterman score: 722; 45.536 identity in 224 aa overlap; carbonic anhydrase 611176..611862 Francisella tularensis subsp. tularensis FSC198 4200286 YP_666748.1 CDS FTF0593c NC_008245.1 612149 612754 R ORF ftt0593c; hypothetical protein complement(612149..612754) Francisella tularensis subsp. tularensis FSC198 4200461 YP_666749.1 CDS FTF0594c NC_008245.1 612818 613690 R Similar to Q87N89 Hypothetical protein from Vibrio parahaemolyticus (344 aa). FASTA: opt: 706 Z-score: 859.6 E(): 5.5e-40 Smith-Waterman score: 706; 42.160 identity in 287 aa overlap ORF ftt0594c; hypothetical protein complement(612818..613690) Francisella tularensis subsp. tularensis FSC198 4200462 YP_666750.1 CDS rubA NC_008245.1 613699 613869 R Similar to Q88C68 Rubredoxin from Pseudomonas putida (55 aa). FASTA: opt: 334 Z-score: 465.9 E(): 4.6e-18 Smith-Waterman score: 334; 78.431 identity in 51 aa overlap; rubredoxin complement(613699..613869) Francisella tularensis subsp. tularensis FSC198 4198963 YP_666751.1 CDS FTF0596c NC_008245.1 613956 614573 R ORF ftt0596c; hypothetical protein complement(613956..614573) Francisella tularensis subsp. tularensis FSC198 4200463 YP_666752.1 CDS FTF0597 NC_008245.1 614685 616079 D Similar to Q9K5Z6 Hypothetical UPF0061 protein BH393 from Bacillus halodurans (492 aa). FASTA: opt: 1251 Z-score: 1519.2 E(): 1e-76 Smith-Waterman score: 1357; 48.233 identity in 481 aa overlap ORF ftt0597; hypothetical protein 614685..616079 Francisella tularensis subsp. tularensis FSC198 4200464 YP_666753.1 CDS FTF0598c NC_008245.1 616111 617391 R Similar to Q8XLU3 Probable transmembrane symporter from Clostridium perfringens (435 aa). FASTA: opt: 881 Z-score: 961.9 E(): 1.1e-45 Smith-Waterman score: 881; 33.721identity in 430 aa overlap ORF ftt0598c; Sodium-dicarboxylate symporter family protein complement(616111..617391) Francisella tularensis subsp. tularensis FSC198 4200465 YP_666754.1 CDS FTF0599 NC_008245.1 617587 618615 D Similar to Q9AAR1 SIS domain protein from Caulobacter crescentus (358 aa). FASTA: opt: 864 Z-score: 1052.1 E(): 1e-50 Smith-Waterman score: 864; 42.353 identity in 340 aa overlap. Putative Glucosamine-fructose-6-phosphate aminotransferase ORF ftt0599; SIS domain-containing protein 617587..618615 Francisella tularensis subsp. tularensis FSC198 4200466 YP_666755.1 CDS FTF0601 NC_008245.1 620200 620319 D ORF ftt0601; hypothetical protein 620200..620319 Francisella tularensis subsp. tularensis FSC198 4200468 YP_666756.1 CDS FTF0602c NC_008245.1 620946 622424 R ORF ftt0602c; hypothetical protein complement(620946..622424) Francisella tularensis subsp. tularensis FSC198 4200469 YP_666757.1 CDS FTF0603 NC_008245.1 622984 623163 D ORF ftt0603; hypothetical protein 622984..623163 Francisella tularensis subsp. tularensis FSC198 4200470 YP_666758.1 CDS FTF0604 NC_008245.1 623681 624115 D Similar to Q9CNR2 NhaP NA+/H+ antiporter Conserved hypothetical membrane protein from Pasteurella multocida (441 aa). FASTA: opt: 315 Z-score: 391.3 E(): 6.6e-14 Smith-Waterman score: 315; 39.850 identity in 133 aa overlap. Matches to a central part of an Nhap protein ORF ftt0604; hypothetical protein 623681..624115 Francisella tularensis subsp. tularensis FSC198 4200471 YP_666759.1 CDS FTF0605c NC_008245.1 624301 624489 R ORF ftt0605c; hypothetical protein complement(624301..624489) Francisella tularensis subsp. tularensis FSC198 4200472 YP_666760.1 CDS ispG NC_008245.1 625293 626510 D catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 625293..626510 Francisella tularensis subsp. tularensis FSC198 4199303 YP_666761.1 CDS FTF0608 NC_008245.1 626525 627103 D Similar to Q9KHC2 Hypothetical 27.0 kDa protein from secondary endosymbiont of Glycaspis brimblecombei (244 aa). FASTA: opt: 467 Z-score: 605.3 E(): 8e-26 Smith-Waterman score: 467; 44.751identity in 181 aa overlap ORF ftt0608; hypothetical protein 626525..627103 Francisella tularensis subsp. tularensis FSC198 4200474 YP_666762.1 CDS FTF0609 NC_008245.1 627254 629047 D Similar to Q83F75 Peptidase, M24 family protein from Coxiella burnetii (597 aa). FASTA: opt: 1665 Z-score: 1963.9 E(): 1.7e-101 Smith-Waterman score: 1665; 45.286 identity in 594 aa overlap ORF ftt0609; peptidase, M24 family protein 627254..629047 Francisella tularensis subsp. tularensis FSC198 4200475 YP_666763.1 CDS FTF0610 NC_008245.1 629145 630209 D Similar to Q8DFB3 DNA/RNA endonuclease G from Vibrio vulnificus (247 aa). FASTA: opt: 682 Z-score: 838.7 E(): 8e-39 Smith-Waterman score: 682; 46.311 identity in 244 aa overlap ORF ftt0610; DNA/RNA endonuclease family protein 629145..630209 Francisella tularensis subsp. tularensis FSC198 4200476 YP_666764.1 CDS FTF0611c NC_008245.1 630200 631063 R Similar to Q9L6I3 Extended-spectrum beta-lactamase BES-1 from Serratia marcescens (292 aa).FASTA: opt: 621 Z-score: 723.1 E(): 2.2e-32 Smith-Waterman score: 621; 34.397 identity in 282 aa overlap ORF ftt0611c; beta-lactamase complement(630200..631063) Francisella tularensis subsp. tularensis FSC198 4200611 YP_666765.1 CDS FTF0612 NC_008245.1 631499 632311 D ORF ftt0612; hypothetical protein 631499..632311 Francisella tularensis subsp. tularensis FSC198 4200612 YP_666766.1 CDS FTF0613c NC_008245.1 632632 633051 R This ORF is longer. ORF ftt0613c; hypothetical protein complement(632632..633051) Francisella tularensis subsp. tularensis FSC198 4200613 YP_666767.1 CDS FTF0614c NC_008245.1 633297 634787 R Similar to Q820B4 Apolipoprotein N-acyltransferase from Coxiella burnetii (485 aa). FASTA: opt: 984 Z-score: 1082.0 E(): 2.2e-52 Smith-Waterman score: 984; 35.903 identity in 493 aa overlap ORF ftt0614c; apolipoprotein N-acyltransferase complement(633297..634787) Francisella tularensis subsp. tularensis FSC198 4200614 YP_666768.1 CDS FTF0615c NC_008245.1 634787 635647 R Similar to Q8EHP0 Magnesium and cobalt efflux protein CorC from Shewanella oneidensis (291 aa). FASTA: opt: 676 Z-score: 772.4 E(): 3.9e-35 Smith-Waterman score: 676; 39.847 identity in 261 aa overlap ORF ftt0615c; metal ion transporter protein complement(634787..635647) Francisella tularensis subsp. tularensis FSC198 4200615 YP_666769.1 CDS FTF0616c NC_008245.1 635619 636125 R Similar to Q8EHN9 Hypothetical UPF0054 protein SO117 from Shewanella oneidensis (153 aa). FATSA: opt: 433 Z-score: 547.4 E(): 1.3e-22 Smith-Waterman score: 433; 44.025identity in 159 aa overlap ORF ftt0616c; hypothetical protein complement(635619..636125) Francisella tularensis subsp. tularensis FSC198 4200616 YP_666770.1 CDS phoH NC_008245.1 636100 637083 R Simliar to Q87VY0 PhoH-like protein from Pseudomonas syringae (340 aa). FASTA: opt: 1132 Z-score: 1306.4 E(): 7.1e-65 Smith-Waterman score: 1132; 52.923 identity in 325 aa overlap; phoH-like protein complement(636100..637083) Francisella tularensis subsp. tularensis FSC198 4199727 YP_666771.1 CDS yleA NC_008245.1 637102 638430 R catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase complement(637102..638430) Francisella tularensis subsp. tularensis FSC198 4199033 YP_666772.1 CDS FTF0619 NC_008245.1 638653 639327 D Similar to O67476 O-methyltransferase from Aquifex aeolicus (212 aa). FASTA: opt: 382 Z-score: 477.6 E(): 1e-18 Smith-Waterman score: 382; 33.495 identity in 206 aa overlap. ORF ftt0619; o-methyltransferase family protein 638653..639327 Francisella tularensis subsp. tularensis FSC198 4200617 YP_666773.1 CDS FTF0620 NC_008245.1 639336 640079 D Similar to Q8PER3 Acid phosphatase from Xanthomonas axonopodis (310 aa). FASTA: opt: 238 Z-score: 293.2 E(): 1.9e-08 Smith-Waterman score: 238; 24.583 identity in 240 aa overlap. ORF ftt0620; HAD superfamily protein 639336..640079 Francisella tularensis subsp. tularensis FSC198 4200618 YP_666774.1 CDS tdk NC_008245.1 640095 640688 D catalyzes the formation of thymidine 5'-phosphate from thymidine; thymidine kinase 640095..640688 Francisella tularensis subsp. tularensis FSC198 4199136 YP_666775.1 CDS FTF0622c NC_008245.1 640731 641195 R ORF ftt0622c; hypothetical protein complement(640731..641195) Francisella tularensis subsp. tularensis FSC198 4200619 YP_666776.1 CDS tig NC_008245.1 641350 642666 D Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 641350..642666 Francisella tularensis subsp. tularensis FSC198 4199145 YP_666777.1 CDS clpP NC_008245.1 642692 643297 D hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 642692..643297 Francisella tularensis subsp. tularensis FSC198 4200267 YP_666778.1 CDS clpX NC_008245.1 643321 644574 D binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 643321..644574 Francisella tularensis subsp. tularensis FSC198 4200268 YP_666779.1 CDS lon NC_008245.1 644599 646923 D Similar to Q8Z8V0 Lon protease from Salmonella typhi (784 aa). FASTA: opt: 2734 Z-score: 2797.3 E(): 6.4e-148 Smith-Waterman score: 2734; 54.450 identity in 764 aa overlap.; DNA-binding, ATP-dependent protease La 644599..646923 Francisella tularensis subsp. tularensis FSC198 4199562 YP_666780.1 CDS hupB NC_008245.1 647010 647282 D Similar to Q93TM3 Histone-like protein HU form B from Pseudomonas putida (strain KT2440) (90 aa). FASTA: opt: 380 Z-score: 519.0 E(): 5.2e-21 Smith-Waterman score: 380; 68.539 identity in 89 aa overlap.; histone-like protein HU form B 647010..647282 Francisella tularensis subsp. tularensis FSC198 4200650 YP_666781.1 CDS FTF0628 NC_008245.1 647394 648824 D Similar to PPID_BUCAP (Q8K987) Peptidyl-prolyl cis-trans isomerase from Buchnera aphidicola (subsp. Schizaphis graminum) (621 aa). FASTA: opt: 298 Z-score: 309.1E(): 2.5e-09 Smith-Waterman score: 298; 23.362 identity in 351 aa overlap. 200 aa shorter (in C-term) than most of the homologs. ORF ftt0628; hypothetical protein 647394..648824 Francisella tularensis subsp. tularensis FSC198 4200620 YP_666782.1 CDS miaA NC_008245.1 648825 649751 D IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 648825..649751 Francisella tularensis subsp. tularensis FSC198 4199844 YP_666783.1 CDS hfq NC_008245.1 649862 650191 D Similar to HFQ_PASMU (Q9CMC6) Hfq protein from Pasteurella multocida (95 aa). FASTA: opt: 384 Z-score: 504.4 E(): 3.3e-20 Smith-Waterman score: 384; 68.182 identity in 88 aa overlap. Plays a role in degradation of RNA transcripts.; host factor I for bacteriophage Q beta replication 649862..650191 Francisella tularensis subsp. tularensis FSC198 4200193 YP_666784.1 CDS hflX NC_008245.1 650243 651550 D Similar to Q87VJ5 GTP-binding protein HflX from Pseudomonas syringae (pv. tomato) (433 aa). FASTA: opt: 1331 Z-score: 1520.3 E(): 8.6e-77 Smith-Waterman score: 1331; 49.302 identity in 430 aa overlap. Together with HflC-HflK involved in stability of phage lambda cII repressor; protease, GTP-binding subunit 650243..651550 Francisella tularensis subsp. tularensis FSC198 4200192 YP_666785.1 CDS FTF0632c NC_008245.1 651561 652751 R Similar to O53772 Putative oxidoreductase (Monooxygenase) from Mycobacterium tuberculosis (388 aa). FASTA: opt: 832 Z-score: 997.9 E(): 1.1e-47 Smith-Waterman score: 832; 35.550 identity in 391 aa overlap. ORF ftt0632c; hypothetical protein complement(651561..652751) Francisella tularensis subsp. tularensis FSC198 4200621 YP_666786.1 CDS hflK NC_008245.1 652923 653990 D Similar to Q8FAK7 HflK protein from Escherichia coli (419 aa). FASTA: opt: 843 Z-score: 932.9 E(): 4.5e-44 Smith-Waterman score: 843; 40.0 identity in 330 aa overlap. With HflC, part of modulator for protease specific for FtsH phage lambda cII repressor.; hypothetical protein 652923..653990 Francisella tularensis subsp. tularensis FSC198 4200382 YP_666787.1 CDS hflC NC_008245.1 653992 654918 D Similar to Q8EJ66 HflC protein from Shewanella oneidensis (297 aa). FASTA: opt: 799 Z-score: 895.3 E(): 5.6e-42 Smith-Waterman score: 799; 42.466 identity in 292 aa overlap. With HflK, part of modulator for protease specific for FtsH phage lambda cII repressor.; hypothetical protein 653992..654918 Francisella tularensis subsp. tularensis FSC198 4200381 YP_666788.1 CDS wzb NC_008245.1 654919 655404 D Similar to O35016 YFKJ protein from Bacillus subtilis (156 aa). FASTA: opt: 391 Z-score: 494.5 E(): 1.2e-19 Smith-Waterman score: 391; 38.608 identity in 158 aa overlap.; low molecular weight (LMW) phosphotyrosine protein phosphatase 654919..655404 Francisella tularensis subsp. tularensis FSC198 4200689 YP_666789.1 CDS engB NC_008245.1 655401 655994 D binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 655401..655994 Francisella tularensis subsp. tularensis FSC198 4199676 YP_666790.1 CDS FTF0638 NC_008245.1 657431 657781 D Putative fragment. Weak similarity to leuA LE12_METJA (Q58595) 2-isopropylmalate synthase 2 from Methanococcus jannaschii (518 aa). FASTA: opt: 119 Z-score: 151.8 E(): 1.5 Smith-Waterman score: 119; 26.316 identity in 114 aa overlap (6-115:356-467). Next downstream ORF also has similarity to leuA. ORF ftt0638; hypothetical protein 657431..657781 Francisella tularensis subsp. tularensis FSC198 4200622 YP_666791.1 CDS FTF0639 NC_008245.1 657823 657933 D Putative fragment. Weak similarity to leuA LE12_METJA (Q58595) 2-isopropylmalate synthase 2 from Methanococcus jannaschii (518 aa). FASTA: opt: 86 Z-score: 142.0 E(): 5.1 Smith-Waterman score: 86; 50.000 identity in 32 aa overlap (1-32:479-510). Next upstream ORF also have similarity to leuA. ORF ftt0639; hypothetical protein 657823..657933 Francisella tularensis subsp. tularensis FSC198 4200623 YP_666792.1 CDS ilvD NC_008245.1 657957 659612 D catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 657957..659612 Francisella tularensis subsp. tularensis FSC198 4200664 YP_666793.1 CDS ilvH NC_008245.1 661475 661792 D Similar to Q8A610 Acetohydroxyacid synthase small subunit (187 aa). FASTA: opt: 159 Z-score: 221.3 E(): 0.0002 Smith-Waterman score: 159; 33.333 identity in 75 aa overlap.; acetolactate synthase small subunit 661475..661792 Francisella tularensis subsp. tularensis FSC198 4200666 YP_666794.1 CDS mfd NC_008245.1 662987 666412 R Similar to Q9CM06 Mfd from Pasteurella multocida (1145 aa). FASTA: opt: 3312 Z-score: 3697.7 E(): 4.5e-198 Smith-Waterman score: 3312; 44.794 identity in 1143 aa overlap.; transcription-repair coupling factor complement(662987..666412) Francisella tularensis subsp. tularensis FSC198 4199841 YP_666795.1 CDS FTF0645c NC_008245.1 666457 667143 R Similar to YCCA_ECOLI (P06967) Hypothetical protein yccA from Escherichia coli (219 aa). FASTA: opt: 588 Z-score: 603.2 E(): 1.1e-25 Smith-Waterman score: 588; 48.416 identity in 221 aa overlap. ORF ftt0645c; hypothetical protein complement(666457..667143) Francisella tularensis subsp. tularensis FSC198 4200624 YP_666796.1 CDS FTF0646c NC_008245.1 667259 668518 R ORF ftt0646c; hypothetical protein complement(667259..668518) Francisella tularensis subsp. tularensis FSC198 4200625 YP_666797.1 CDS FTF0647c NC_008245.1 668518 668949 R Similar to Q82WE7 Hypothetical protein from Nitrosomonas europaea (164 aa). FASTA: opt: 383 Z-score: 490.4 E(): 2e-19 Smith-Waterman score: 383; 41.606 identity in 137 aa overlap. ORF ftt0647c; hypothetical protein complement(668518..668949) Francisella tularensis subsp. tularensis FSC198 4200626 YP_666798.1 CDS nth NC_008245.1 668946 669584 R Similar to Q9HYB4 Endonuclease III from Pseudomonas aeruginosa (212 aa). FASTA: opt: 916 Z-score: 1153.9 E(): 2.2e-56 Smith-Waterman score: 916; 67.308identity in 208 aa overlap.; endonuclease III complement(668946..669584) Francisella tularensis subsp. tularensis FSC198 4200243 YP_666799.1 CDS rnfB NC_008245.1 669577 670206 R Similar to Q83B23 4Fe-4S binding domain protein from Coxiella burnetii (213 aa). FASTA: opt: 552 Z-score: 680.7 E(): 5e-30 Smith-Waterman score: 552; 42.788 identity in 208 aa overlap.; Iron-sulfur cluster-binding protein complement(669577..670206) Francisella tularensis subsp. tularensis FSC198 4200764 YP_666800.1 CDS grxB NC_008245.1 670208 670852 R cofactor involved in the reduction of disulfides; glutaredoxin complement(670208..670852) Francisella tularensis subsp. tularensis FSC198 4200302 YP_666801.1 CDS FTF0651 NC_008245.1 670914 672482 D Similar to Q9L9P6 IraB from Legionella pneumophila (501 aa). FASTA: opt: 1486 Z-score: 1640.1 E(): 1.8e-83 Smith-Waterman score: 1486; 46.708 identity in 486 aa overlap. ORF ftt0651; proton-dependent oligopeptide transport (POT) family protein 670914..672482 Francisella tularensis subsp. tularensis FSC198 4200627 YP_666802.1 CDS ftnA NC_008245.1 672485 672982 R Similar to Q899N4 Ferritin from Clostridium tetani (169 aa). FASTA: opt: 527 Z-score: 679.5 E(): 5.9e-30 Smith-Waterman score: 527; 45.783identity in 166 aa overlap.; Ferritin-like protein complement(672485..672982) Francisella tularensis subsp. tularensis FSC198 4199191 YP_666803.1 CDS lipA NC_008245.1 673189 674172 D catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 673189..674172 Francisella tularensis subsp. tularensis FSC198 4199554 YP_666804.1 CDS elbB NC_008245.1 674202 674861 D Similar to Q87IN9 Sigma cross-reacting protein 27A from Vibrio parahaemolyticus (216 aa). FASTA: opt: 683 Z-score: 873.4 E(): 9.3e-41 Smith-Waterman score: 683; 49.074 identity in 216 aa overlap.; isoprenoid biosynthesis protein with amidotransferase-like domain 674202..674861 Francisella tularensis subsp. tularensis FSC198 4199671 YP_666805.1 CDS FTF0655 NC_008245.1 674877 675623 D Similar to YO32_SHEON (Q8EEF0) Hypothetical UPF0082 protein SO2432 from Shewanella oneidensis (248 aa). FASTA: opt: 1090 Z-score: 1308.8 E(): 5.2e-65 Smith-Waterman score: 1090; 64.516 identity in 248 aa overlap. ORF ftt0655; hypothetical protein 674877..675623 Francisella tularensis subsp. tularensis FSC198 4200628 YP_666806.1 CDS ruvC NC_008245.1 675699 676235 D endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 675699..676235 Francisella tularensis subsp. tularensis FSC198 4198967 YP_666807.1 CDS ruvA NC_008245.1 677520 678173 D plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 677520..678173 Francisella tularensis subsp. tularensis FSC198 4198965 YP_666808.1 CDS FTF0659 NC_008245.1 678199 679611 D Similar to Q87TH5 Conserved hypothetical protein from Vibrio parahaemolyticus (514 aa). FASTA: opt: 1129 Z-score: 1083.4 E(): 1.9e-52 Smith-Waterman score: 1132; 42.000 identity in 450 aa overlap ORF ftt0659; DNA recombination protein RmuC family protein 678199..679611 Francisella tularensis subsp. tularensis FSC198 4199479 YP_666809.1 CDS FTF0660 NC_008245.1 679660 680247 D ORF ftt0660; hypothetical protein 679660..680247 Francisella tularensis subsp. tularensis FSC198 4199480 YP_666810.1 CDS FTF0661c NC_008245.1 680269 680565 R Similar to Q82LF3 Hypothetical protein from Streptomyces avermitilis (109 aa). FASTA: opt: 260 Z-score: 364.1 E(): 2.2e-12 Smith-Waterman score: 260; 47.778 identity in 90 aa overlap. The homologs are of different sizes. ORF ftt0661c; hypothetical protein complement(680269..680565) Francisella tularensis subsp. tularensis FSC198 4199481 YP_666811.1 CDS FTF0662c NC_008245.1 680728 681111 R Similar to Q9KMT3 Hypothetical protein VCA0237 from Vibrio cholerae (189 aa). FASTA: opt: 308 Z-score: 400.0 E(): 2.2e-14 Smith-Waterman score: 308; 42.857 identity in 112 aa overlap. ORF ftt0662c; hypothetical protein complement(680728..681111) Francisella tularensis subsp. tularensis FSC198 4199482 YP_666812.1 CDS FTF0663 NC_008245.1 681224 682036 D ORF ftt0663; hypothetical protein 681224..682036 Francisella tularensis subsp. tularensis FSC198 4199483 YP_666813.1 CDS hdc NC_008245.1 682023 683159 R catalyzes the formation of histamine from L-histidine; histidine decarboxylase complement(682023..683159) Francisella tularensis subsp. tularensis FSC198 4200369 YP_666814.1 CDS FTF0665c NC_008245.1 683267 683872 R Similar to Q88IX8 Class II aldolase/adducin domain protein from Pseudomonas putida (strain KT2440) (251 aa). FASTA: opt: 472 Z-score: 599.3 E(): 1.7e-25 Smith-Waterman score: 472; 38.579identity in 197 aa overlap. ORF ftt0665c; aldolase/adducin class II family protein complement(683267..683872) Francisella tularensis subsp. tularensis FSC198 4199484 YP_666815.1 CDS FTF0666c NC_008245.1 683963 684544 R Similar to Q896H4 DNA-3-methyladenine glycosylase from Clostridium tetani (203 aa). FASTA: opt: 451 Z-score: 589.0 E(): 6.4e-25 Smith-Waterman score: 451; 42.784 identity in 194 aa overlap. ORF ftt0666c; methylpurine-DNA glycosylase family protein complement(683963..684544) Francisella tularensis subsp. tularensis FSC198 4199485 YP_666816.1 CDS FTF0667 NC_008245.1 684672 685175 D ORF ftt0667; hypothetical protein 684672..685175 Francisella tularensis subsp. tularensis FSC198 4199486 YP_666817.1 CDS FTF0668 NC_008245.1 685175 685807 D Similar to Q8A546 Putative membrane transporter involved in nicotinamide mononucleotide transport from Bacteroides thetaiotaomicron (188 aa). FASTA: opt: 333 Z-score: 403.8 E(): 1.3e-14 Smith-Waterman score: 333; 29.016identity in 193 aa overlap. ORF ftt0668; nicotinamide mononucleotide transport (NMT) family protein 685175..685807 Francisella tularensis subsp. tularensis FSC198 4199487 YP_666818.1 CDS FTF0669 NC_008245.1 685905 687080 D Similar to Q8GRF6 MagA protein from Magnetospirillum magnetotacticum (Aquaspirillum magnetotacticum) (432 aa). FASTA: opt: 769 Z-score: 826.0 E(): 4.1e-38 Smith-Waterman score: 769; 31.635identity in 373 aa overlap. ORF ftt0669; Sodium/hydrogen exchanger family protein 685905..687080 Francisella tularensis subsp. tularensis FSC198 4199488 YP_666819.1 CDS FTF0670c NC_008245.1 687413 687877 R ORF ftt0670c; hypothetical protein complement(687413..687877) Francisella tularensis subsp. tularensis FSC198 4199489 YP_666820.1 CDS FTF0671 NC_008245.1 688190 689470 D Similar to Q83DX6 Major facilitator family transporter from Coxiella burnetii (421 aa). FASTA: opt: 689 Z-score: 731.9 E(): 7.1e-33 Smith-Waterman score: 689; 29.197identity in 411 aa overlap. ORF ftt0671; major facilitator transporter 688190..689470 Francisella tularensis subsp. tularensis FSC198 4199490 YP_666821.1 CDS FTF0673c NC_008245.1 690742 691749 R Similar to Q8DF84 Predicted deacylase from Vibrio vulnificus (352 aa). FASTA: opt: 789 Z-score: 951.5 E(): 4.2e-45 Smith-Waterman score: 789; 34.328 identity in 335 aa overlap. ORF ftt0673c; hypothetical protein complement(690742..691749) Francisella tularensis subsp. tularensis FSC198 4199492 YP_666822.1 CDS prsA NC_008245.1 691960 692928 D Similar to KPRS_RALSO (Q8Y2E1) Ribose-phosphate pyrophosphokinase from Ralstonia solanacearum (Pseudomonas solanacearum) (316 aa). FASTA: opt: 1269 Z-score: 1520.3 E(): 8.6e-77 Smith-Waterman score: 1269; 58.413 identity in 315 aa overlap.; ribose-phosphate pyrophosphokinase 691960..692928 Francisella tularensis subsp. tularensis FSC198 4199945 YP_666823.1 CDS rplY NC_008245.1 693028 693318 D the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25 693028..693318 Francisella tularensis subsp. tularensis FSC198 4199001 YP_666824.1 CDS FTF0676 NC_008245.1 693414 694673 D Similar to Q83E77 Hypothetical protein from Coxiella burnetii (417 aa). FASTA: opt: 1049 Z-score: 1211.5 E(): 1.4e-59 Smith-Waterman score: 1049; 40.049 identity in 407 aa overlap. ORF ftt0676; hypothetical protein 693414..694673 Francisella tularensis subsp. tularensis FSC198 4199493 YP_666825.1 CDS FTF0677c NC_008245.1 694878 695654 R Similar to Q8Z984 Putative methyltransferase from Salmonella typhi (256 aa). FASTA: opt: 707 Z-score: 818.1 E(): 1.1e-37 Smith-Waterman score: 707; 42.570 identity in 249 aa overlap. ORF ftt0677c; hypothetical protein complement(694878..695654) Francisella tularensis subsp. tularensis FSC198 4199494 YP_666826.1 CDS FTF0678c NC_008245.1 696263 696538 R ORF ftt0678c; hypothetical protein complement(696263..696538) Francisella tularensis subsp. tularensis FSC198 4199495 YP_666827.1 CDS FTF0679c NC_008245.1 696553 697644 R translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD complement(696553..697644) Francisella tularensis subsp. tularensis FSC198 4199496 YP_666828.1 CDS pth NC_008245.1 697663 698238 R Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase complement(697663..698238) Francisella tularensis subsp. tularensis FSC198 4199948 YP_666829.1 CDS blaA NC_008245.1 698231 699115 R Similar to BLAC_YEREN (Q01166) Beta-lactamase precursor from Yersinia enterocolitica (294 aa). FASTA: opt: 670 Z-score: 829.7 E(): 2.5e-38 Smith-Waterman score: 670; 36.268 identity in 284 aa overlap.; Beta-lactamase class A complement(698231..699115) Francisella tularensis subsp. tularensis FSC198 4200310 YP_666830.1 CDS FTF0682c NC_008245.1 699124 699969 R ORF ftt0682c; hypothetical protein complement(699124..699969) Francisella tularensis subsp. tularensis FSC198 4199497 YP_666831.1 CDS pilD NC_008245.1 700009 700827 R Similar to Q888U2 Type IV pilus prepilin peptidase PilD from Pseudomonas syringae (pv. tomato) (290 aa). FASTA: opt: 784 Z-score: 898.0 E(): 4e-42 Smith-Waterman score: 784; 44.531identity in 256 aa overlap. Cleaves the leader peptide of the fiber building block proteins and methylates the resulting N-terminal residue.; Type IV pili leader peptidase and methylase complement(700009..700827) Francisella tularensis subsp. tularensis FSC198 4199731 YP_666832.1 CDS sthA NC_008245.1 700831 702246 R catalyzes the conversion of NADPH to NADH; soluble pyridine nucleotide transhydrogenase complement(700831..702246) Francisella tularensis subsp. tularensis FSC198 4199086 YP_666833.1 CDS FTF0685c NC_008245.1 702500 703483 R Similar to KCH_ECOLI (P31069) Putative potassium channel protein (417 aa). FASTA: opt: 381 Z-score: 423.3 E(): 1.1e-15 Smith-Waterman score: 381; 31.203identity in 266 aa overlap. ORF ftt0685c; potassium channel protein complement(702500..703483) Francisella tularensis subsp. tularensis FSC198 4199036 YP_666834.1 CDS FTF0686c NC_008245.1 703563 704867 R Similar to Q83E30 Proton/peptide symporter family protein from Coxiella burnetii (492 aa). FASTA: opt: 609 Z-score: 644.8 E(): 5e-28 Smith-Waterman score: 609; 26.545 identity in 437 aa overlap. The start is approx 55 aa later than the homologs. ORF ftt0686c; proton-dependent oligopeptide transport (POT) family protein complement(703563..704867) Francisella tularensis subsp. tularensis FSC198 4199037 YP_666835.1 CDS hslU NC_008245.1 705114 706481 R heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU complement(705114..706481) Francisella tularensis subsp. tularensis FSC198 4200208 YP_666836.1 CDS hslV NC_008245.1 706489 707040 R heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit complement(706489..707040) Francisella tularensis subsp. tularensis FSC198 4200209 YP_666837.1 CDS FTF0689 NC_008245.1 707232 707981 D ORF ftt0689; hypothetical protein 707232..707981 Francisella tularensis subsp. tularensis FSC198 4199038 YP_666838.1 CDS lplA NC_008245.1 707984 708886 R Similar to Q9KS71 Lipoate-protein ligase A from Vibrio cholerae (338 aa). FASTA: opt: 699 Z-score: 831.1 E(): 2.1e-38 Smith-Waterman score: 699; 38.545identity in 275 aa overlap.; lipoate-protein ligase A complement(707984..708886) Francisella tularensis subsp. tularensis FSC198 4199566 YP_666839.1 CDS tyrS NC_008245.1 708999 710189 D catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 708999..710189 Francisella tularensis subsp. tularensis FSC198 4198975 YP_666840.1 CDS isftu1 NC_008245.1 710690 711474 R ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and also mariner elements, show that this transposase shares strongly conserved residues, including a fully conserved dipeptide,Asp-Glu (DE), and a block consisting of a fully conserved Asp and highly conserved Glu, separated by 34 or 35 residues (D35E). The conserved dipeptide is only present if ribosomal frameshifting occurs.; transposase complement(join(710690..711148,711148..711474)) Francisella tularensis subsp. tularensis FSC198 4199632 YP_666841.1 CDS mutM NC_008245.1 711545 712369 R Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase complement(711545..712369) Francisella tularensis subsp. tularensis FSC198 4200113 YP_666842.1 CDS FTF0694 NC_008245.1 712463 714562 D Similar to AAP18158 2-acyl-glycerophospho-ethanolamine acyltransferase,acyl-acyl-carrier protein synthetase from Shigella flexneri (719 aa). FASTA: opt: 735 Z-score: 862.5 E(): 3.8e-40 Smith-Waterman score: 826; 33.661identity in 508 aa overlap. n. b. No match between aa 1 and 196. Several domains missing compared to AAP18158 ORF ftt0694; hypothetical protein 712463..714562 Francisella tularensis subsp. tularensis FSC198 4199039 YP_666843.1 CDS mraW NC_008245.1 714568 715485 D Similar to AAP95225 S-adenosyl-methyltransferase MraW from Haemophilus ducreyi (313 aa). FASTA: opt: 918 Z-score: 1107.1 E(): 8.9e-54 Smith-Waterman score: 918; 49.677identity in 310 aa overlap.; S-adenosyl-methyltransferase MraW 714568..715485 Francisella tularensis subsp. tularensis FSC198 4199852 YP_666844.1 CDS FTF0696 NC_008245.1 715482 715832 D Weak similarity to cell division protein ftsL. ORF ftt0696; hypothetical protein 715482..715832 Francisella tularensis subsp. tularensis FSC198 4199040 YP_666845.1 CDS ftsI NC_008245.1 715825 717519 D Similar to Q83F33 Penicillin-binding protein 3 from Coxiella burnetii (548 aa). FASTA: opt: 1361 Z-score: 1597.9 E(): 4.1e-81 Smith-Waterman score: 1361; 40.325 identity in 553 aa overlap.; penicillin binding protein (peptidoglycan synthetase) 715825..717519 Francisella tularensis subsp. tularensis FSC198 4199194 YP_666846.1 CDS rpsO NC_008245.1 717625 717891 D primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 717625..717891 Francisella tularensis subsp. tularensis FSC198 4198953 YP_666847.1 CDS pnp NC_008245.1 717948 720029 D Similar to Q83D87 Polyribonucleotide nucleotidyltransferase from Coxiella burnetii (696 aa). FASTA: opt: 2437 Z-score: 2800.2 E(): 4.4e-148 Smith-Waterman score: 2437; 54.401identity in 693 aa overlap.; polynucleotide phosphorylase/polyadenylase 717948..720029 Francisella tularensis subsp. tularensis FSC198 4199735 YP_666848.1 CDS FTF0700 NC_008245.1 720035 720385 D essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors; iron-sulfur cluster insertion protein ErpA 720035..720385 Francisella tularensis subsp. tularensis FSC198 4199041 YP_666849.1 CDS kdsA NC_008245.1 720395 721243 D catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 720395..721243 Francisella tularensis subsp. tularensis FSC198 4199506 YP_666850.1 CDS udk NC_008245.1 721254 721919 D functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor; uridine kinase 721254..721919 Francisella tularensis subsp. tularensis FSC198 4198981 YP_666851.1 CDS rpoZ NC_008245.1 721912 722130 D Similar to RPOZ_PSEPK (Q88C82) Probable DNA-directed RNA polymerase omega chain from Pseudomonas putida (strain KT2440) (87 aa). FASTA: opt: 194 Z-score: 293.6 E(): 1.8e-08 Smith-Waterman score: 194; 52.857 identity in 70 aa overlap.; DNA-directed RNA polymerase subunit omega 721912..722130 Francisella tularensis subsp. tularensis FSC198 4200332 YP_666852.1 CDS FTF0704 NC_008245.1 722395 722967 D ORF ftt0704; hypothetical protein 722395..722967 Francisella tularensis subsp. tularensis FSC198 4199042 YP_666853.1 CDS rumA NC_008245.1 723056 724405 D in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]; 23S rRNA 5-methyluridine methyltransferase 723056..724405 Francisella tularensis subsp. tularensis FSC198 4198964 YP_666854.1 CDS FTF0707 NC_008245.1 725336 726130 D Similar to Q9CK00 Hypothetical protein PM1838 from Pasteurella multocida (234 aa). FASTA: opt: 456 Z-score: 507.2 E(): 2.3e-20 Smith-Waterman score: 456; 34.483identity in 232 aa overlap. ORF ftt0707; nicotinamide mononucleotide transport (NMT) family protein 725336..726130 Francisella tularensis subsp. tularensis FSC198 4199043 YP_666855.1 CDS FTF0708 NC_008245.1 726218 727471 D Similar to Q83BD8 Major facilitator family transporter from Coxiella burnetii (411 aa). FASTA: opt: 868 Z-score: 941.6 E(): 1.5e-44 Smith-Waterman score: 868; 37.912identity in 364 aa overlap. ORF ftt0708; major facilitator transporter 726218..727471 Francisella tularensis subsp. tularensis FSC198 4199044 YP_666856.1 CDS eno NC_008245.1 727580 728950 D enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 727580..728950 Francisella tularensis subsp. tularensis FSC198 4199677 YP_666857.1 CDS ftsB NC_008245.1 728958 729248 D Similar to FTSB_VIBPA (Q87LQ1) Cell division protein ftsB homolog from Vibrio parahaemolyticus (93 aa). FASTA: opt: 198 Z-score: 273.8 E(): 2.3e-07 Smith-Waterman score: 198; 37.209 identity in 86 aa overlap.; cell division protein 728958..729248 Francisella tularensis subsp. tularensis FSC198 4199193 YP_666858.1 CDS ispD NC_008245.1 729238 729927 D Similar to ISPD_PASMU (P57953) 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (238 aa). FASTA: opt: 506 Z-score: 656.8 E(): 1.1e-28 Smith-Waterman score: 506; 39.381 identity in 226 aa overlap.; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 729238..729927 Francisella tularensis subsp. tularensis FSC198 4199300 YP_666859.1 CDS sdaC1 NC_008245.1 729932 731194 R Similar to SDAC_HAEIN (P44615) Serine transporter from Haemophilus influenzae (412 aa). FASTA: opt: 785 Z-score: 854.1 E(): 1.1e-39 Smith-Waterman score: 785; 33.099 identity in 426 aa overlap.; serine transporter complement(729932..731194) Francisella tularensis subsp. tularensis FSC198 4200727 YP_666860.1 CDS tdh NC_008245.1 731196 732251 R converts threonine and NAD to 1,2-amino-3-oxobutanoate and NADH; functions in threonine catabolism; L-threonine 3-dehydrogenase complement(731196..732251) Francisella tularensis subsp. tularensis FSC198 4199135 YP_666861.1 CDS kbl NC_008245.1 732274 733470 R catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine; 2-amino-3-ketobutyrate coenzyme A ligase complement(732274..733470) Francisella tularensis subsp. tularensis FSC198 4199500 YP_666862.1 CDS FTF0715 NC_008245.1 734003 736285 D Similar to Q9ZIX2 Chitinase c from Pseudoalteromonas sp. S9 (869 aa). FASTA: opt: 331 Z-score: 370.4 E(): 9.6e-13 Smith-Waterman score: 583; 24.111 identity in 900 aa overlap. The homologs are of varying sizes. ORF ftt0715; chitinase family 18 protein 734003..736285 Francisella tularensis subsp. tularensis FSC198 4199045 YP_666863.1 CDS upp NC_008245.1 736464 737108 D Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase 736464..737108 Francisella tularensis subsp. tularensis FSC198 4198984 YP_666864.1 CDS FTF0718 NC_008245.1 738116 738460 D ORF ftt0718; hypothetical protein 738116..738460 Francisella tularensis subsp. tularensis FSC198 4199046 YP_666865.1 CDS FTF0719 NC_008245.1 738517 739740 D Aa 139-320 identical to AAP97846 Hypothetical protein (Fragment) from Francisella tularensis ssp. tularensis strain SchuS4 (184 aa). Similar to Q881T0 Proline/betaine transporter from Pseudomonas syringae (pv. tomato) (438 aa). FASTA: opt: 561 Z-score: 633.8 E(): 2.1e-27 Smith-Waterman score: 561; 25.616 identity in 406 aa overlap. ORF ftt0719; major facilitator transporter 738517..739740 Francisella tularensis subsp. tularensis FSC198 4199047 YP_666866.1 CDS dgt NC_008245.1 739724 741049 R Similar to DGT1_VIBPA (Q87R73) Deoxyguanosinetriphosphate triphosphohydrolase-like protein from Vibrio parahaemolyticus (440 aa). FASTA: opt: 587 Z-score: 683.8 E(): 3.4e-30 Smith-Waterman score: 661; 33.781identity in 447 aa overlap.; deoxyguanosinetriphosphate triphosphohydrolase complement(739724..741049) Francisella tularensis subsp. tularensis FSC198 4199348 YP_666867.1 CDS katG NC_008245.1 741153 743378 R Similar to CATA_YERPE (Q9X6B0) Peroxidase/catalase (EC 1.11.1.6) from Yersinia pestis (737 aa). FASTA: opt: 3041 Z-score: 3508.0 E(): 1.7e-187 Smith-Waterman score: 3041; 59.189 identity in 740 aa overlap.; peroxidase/catalase complement(741153..743378) Francisella tularensis subsp. tularensis FSC198 4199499 YP_666868.1 CDS isftu1 NC_008245.1 744242 745026 R ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and also mariner elements, show that this transposase shares strongly conserved residues, including a fully conserved dipeptide,Asp-Glu (DE), and a block consisting of a fully conserved Asp and highly conserved Glu, separated by 34 or 35 residues (D35E). The conserved dipeptide is only present if ribosomal frameshifting occurs.; transposase complement(join(744242..744700,744700..745026)) Francisella tularensis subsp. tularensis FSC198 4199633 YP_666869.1 CDS FTF0723c NC_008245.1 745333 746121 R Similar to Q88H18 Oxidoreductase, short chain dehydrogenase/reductase family Pseudomonas putida (strain KT2440) (248 aa). FASTA: opt: 792 Z-score: 881.9 E(): 3.1e-41 Smith-Waterman score: 792; 47.984 identity in 248 aa overlap. ORF ftt0723c; short-chain dehydrogenase complement(745333..746121) Francisella tularensis subsp. tularensis FSC198 4199048 YP_666870.1 CDS glpT NC_008245.1 747524 748840 R Similar to Q81V41 Glycerol-3-phosphate transporter from Bacillus anthracis (strain Ames) (449 aa). FASTA: opt: 1382 Z-score: 1521.3 E(): 7.6e-77 Smith-Waterman score: 1382; 48.268identity in 433 aa overlap.; glycerol-3-phosphate transporter complement(747524..748840) Francisella tularensis subsp. tularensis FSC198 4199798 YP_666871.1 CDS FTF0726c NC_008245.1 748947 749981 R Similar to Q89FW5 Blr6584 protein from Bradyrhizobium japonicum (342 aa). FASTA: opt: 636 Z-score: 743.1 E(): 1.7e-33 Smith-Waterman score: 743; 36.336identity in 333 aa overlap. ORF ftt0726c; glycerophosphoryl diester phosphodiesterase family protein complement(748947..749981) Francisella tularensis subsp. tularensis FSC198 4199049 YP_666872.1 CDS FTF0727 NC_008245.1 750119 750799 D Similar to Q83FA0 Lipoprotein, putative from Coxiella burnetii (326 aa). FASTA: opt: 255 Z-score: 290.7 E(): 2.7e-08 Smith-Waterman score: 255; 26.606 identity in 218 aa overlap. n. b. The ORF is 100 aa shorter than all homologs (C-term). ORF ftt0727; hypothetical protein 750119..750799 Francisella tularensis subsp. tularensis FSC198 4199050 YP_666873.1 CDS ybhF NC_008245.1 751072 752004 D Similar to Q89II5 ABC transporter ATP-binding protein (310 aa). FASTA: opt: 1060 Z-score: 1223.8 E(): 2.8e-60 Smith-Waterman score: 1060; 54.605 identity in 304 aa overlap.; ABC transporter ATP-binding protein 751072..752004 Francisella tularensis subsp. tularensis FSC198 4200704 YP_666874.1 CDS ybhR NC_008245.1 752001 753119 D Similar to Q8Y316 Probable transmembrane protein from Ralstonia solanacearum (Pseudomonas solanacearum) (381 aa). FASTA: opt: 1138 Z-score: 1260.3 E(): 2.6e-62 Smith-Waterman score: 1138; 45.722 identity in 374 aa overlap.; ABC transporter membrane protein 752001..753119 Francisella tularensis subsp. tularensis FSC198 4200706 YP_666875.1 CDS isftu2 NC_008245.1 753217 753960 D ISFtu2. Transposase, member of the IS5 family. Identical to Q8GM03 putative transposase from Francisella tularensis (247 aa).; transposase 753217..753960 Francisella tularensis subsp. tularensis FSC198 4199290 YP_666876.1 CDS FTF0731c NC_008245.1 754200 754646 R ORF ftt0731c; hypothetical protein complement(754200..754646) Francisella tularensis subsp. tularensis FSC198 4199051 YP_666877.1 CDS FTF0732 NC_008245.1 754743 755090 D ORF ftt0732; hypothetical protein 754743..755090 Francisella tularensis subsp. tularensis FSC198 4199052 YP_666878.1 CDS FTF0733 NC_008245.1 755119 755589 D Similar to Q9A7J3 Glutathione peroxidase from Caulobacter crescentus (160 aa). FASTA: opt: 605 Z-score: 801.1 E(): 9.9e-37 Smith-Waterman score: 605; 55.696 identity in 158 aa overlap. ORF ftt0733; glutathione peroxidase 755119..755589 Francisella tularensis subsp. tularensis FSC198 4199053 YP_666879.1 CDS FTF0736 NC_008245.1 757877 758524 D Similar to Q8REM4 Hypothetical protein FN1075 (215 aa). FASTA: opt: 221 Z-score: 288.5 E(): 3.5e-08 Smith-Waterman score: 221; 25.463identity in 216 aa overlap. ORF ftt0736; hypothetical protein 757877..758524 Francisella tularensis subsp. tularensis FSC198 4199171 YP_666880.1 CDS FTF0737c NC_008245.1 758535 758663 R ORF ftt0737c; hypothetical protein complement(758535..758663) Francisella tularensis subsp. tularensis FSC198 4199172 YP_666881.1 CDS yjeF NC_008245.1 758831 760375 D Similar to Q82Y67 Possible sugar kinase from Nitrosomonas europaea (505 aa). FASTA: Z-score: 922.3 E(): 1.8e-43 Smith-Waterman score: 856; 35.529 identity in 501 aa overlap.; carbohydrate kinase family protein (YjeF-related protein) 758831..760375 Francisella tularensis subsp. tularensis FSC198 4199113 YP_666882.1 CDS hslR NC_008245.1 760359 760727 R Similar to Q88AZ6 Heat shock protein 15 from Pseudomonas syringae (pv. tomato) (135 aa). FASTA: Z-score: 549.3 E(): 1.1e-22 Smith-Waterman score: 447; 58.824 identity in 119 aa overlap.; heat shock protein 15 (HSP15) complement(760359..760727) Francisella tularensis subsp. tularensis FSC198 4200207 YP_666883.1 CDS ostA2 NC_008245.1 761131 763296 R Similar to OSTA_XYLFT (Q87AI9) Organic solvent tolerance protein from Xylella fastidiosa (strain Temecula1 / ATCC 700964) (792 aa). FASTA: opt: 653 Z-score: 763.8 E(): 1.2e-34 Smith-Waterman score: 678; 24.212 identity in 698 aa overlap.; organic solvent tolerance protein complement(761131..763296) Francisella tularensis subsp. tularensis FSC198 4200088 YP_666884.1 CDS FTF0741c NC_008245.1 763318 763548 R ORF ftt0741c; hypothetical protein complement(763318..763548) Francisella tularensis subsp. tularensis FSC198 4199173 YP_666885.1 CDS FTF0742 NC_008245.1 763856 765844 D ORF ftt0742; lipoprotein 763856..765844 Francisella tularensis subsp. tularensis FSC198 4199174 YP_666886.1 CDS FTF0743 NC_008245.1 766525 767340 D Similar to Q87Q96 Conserved hypothetical protein from Vibrio parahaemolyticus (274 aa). FASTA: opt: 950 Z-score: 1132.9 E(): 3.3e-55 Smith-Waterman score: 950; 49.259 identity in 270 aa overlap. ORF ftt0743; hypothetical protein 766525..767340 Francisella tularensis subsp. tularensis FSC198 4199175 YP_666887.1 CDS FTF0744c NC_008245.1 767439 767858 R ORF ftt0744c; hypothetical protein complement(767439..767858) Francisella tularensis subsp. tularensis FSC198 4199176 YP_666888.1 CDS FTF0745c NC_008245.1 767880 768236 R ORF ftt0745c; hypothetical protein complement(767880..768236) Francisella tularensis subsp. tularensis FSC198 4199177 YP_666889.1 CDS FTF0746c NC_008245.1 768334 769125 R Similar to Q88NQ5 Membrane protein, putative from Pseudomonas putida (strain KT2440) (662 aa). FASTA: opt: 267 Z-score: 319.4 E(): 6.8e-10 Smith-Waterman score: 269; 27.179 identity in 195 aa overlap. ORF ftt0746c; hypothetical protein complement(768334..769125) Francisella tularensis subsp. tularensis FSC198 4199178 YP_666890.1 CDS FTF0747c NC_008245.1 769115 769900 R Similar to Q88NQ3 Membrane fusion protein,putative (289 aa). FASTA: opt: 721 Z-score: 853.4 E(): 1.2e-39 Smith-Waterman score: 721; 41.434identity in 251 aa overlap. Similar to ydhJ and yhcQ in E. coli. ORF ftt0747c; hypothetical protein complement(769115..769900) Francisella tularensis subsp. tularensis FSC198 4199179 YP_666891.1 CDS FTF0748 NC_008245.1 770280 770999 D Similar to Q93PU6 Putative regulatory protein TtgV from Pseudomonas putida (259 aa). FASTA: opt: 485 Z-score: 588.0 E(): 7.4e-25 Smith-Waterman score: 485; 33.473 identity in 239 aa overlap. ORF ftt0748; hypothetical protein 770280..770999 Francisella tularensis subsp. tularensis FSC198 4199180 YP_666892.1 CDS FTF0749c NC_008245.1 771059 772045 R Aa 8-183 identical to AAP97845 Hypothetical protein (Fragment) from Francisella tularensis ssp. tularensis strain SchuS4 (176 aa). Similar to Q8CL71 Hypothetical from Yersinia pestis (311 aa). FASTA: opt: 842 Z-score: 992.9 E(): 2e-47 Smith-Waterman score: 842; 44.710 identity in 293 aa overlap ORF ftt0749c; hypothetical protein complement(771059..772045) Francisella tularensis subsp. tularensis FSC198 4199181 YP_666893.1 CDS FTF0750 NC_008245.1 772251 773237 D Similar to Q83AM1 Radical SAM domain protein from Coxiella burnetii (342 aa). FASTA: opt: 1094 Z-score: 1304.2 E(): 9.4e-65 Smith-Waterman score: 1094; 48.930 identity in 327 aa overlap. ORF ftt0750; hypothetical protein 772251..773237 Francisella tularensis subsp. tularensis FSC198 4199182 YP_666894.1 CDS cspA NC_008245.1 773308 773511 R Similar to Q89UH2 Cold shock protein from Bradyrhizobium japonicum (70 aa). FASTA: opt: 297 Z-score: 443.7 E(): 8e-17 Smith-Waterman score: 297; 66.176 identity in 68 aa overlap.; cold shock protein complement(773308..773511) Francisella tularensis subsp. tularensis FSC198 4200279 YP_666895.1 CDS FTF0752c NC_008245.1 773710 773907 R ORF ftt0752c; hypothetical protein complement(773710..773907) Francisella tularensis subsp. tularensis FSC198 4199183 YP_666896.1 CDS rpsU NC_008245.1 774283 774483 D a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 774283..774483 Francisella tularensis subsp. tularensis FSC198 4198960 YP_666897.1 CDS FTF0754c NC_008245.1 774541 774720 R ORF ftt0754c; hypothetical protein complement(774541..774720) Francisella tularensis subsp. tularensis FSC198 4199184 YP_666898.1 CDS FTF0755 NC_008245.1 775136 775630 D ORF ftt0755; hypothetical protein 775136..775630 Francisella tularensis subsp. tularensis FSC198 4199185 YP_666899.1 CDS FTF0756 NC_008245.1 775721 776860 D Similar to Q83BX5 Cation-efflux family protein from Coxiella burnetii (378 aa). FASTA: opt: 773 Z-score: 908.9 E(): 9.8e-43 Smith-Waterman score: 774; 34.605 identity in 367 aa overlap. ORF ftt0756; cation-efflux family protein 775721..776860 Francisella tularensis subsp. tularensis FSC198 4199186 YP_666900.1 CDS galU NC_008245.1 776877 777740 D Similar to Q9K0G7 UTP--glucose-1-phosphate uridylyltransferase from Neisseria meningitidis (serogroup B) (289 aa). FASTA: opt: 1017 Z-score: 1291.1 E(): 5e-64 Smith-Waterman score: 1017; 57.439 identity in 289 aa overlap.; UTP--glucose-1-phosphate uridylyltransferase 776877..777740 Francisella tularensis subsp. tularensis FSC198 4199271 YP_666901.1 CDS FTF0759 NC_008245.1 779213 780130 D Similar to YYAM_BACSU (P37511) Hypothetical transport protein yyaM from Bacillus subtilis (305 aa). FASTA: opt: 402 Z-score: 452.6 E(): 2.6e-17 Smith-Waterman score: 402; 25.614 identity in 285 aa overlap. ORF ftt0759; hypothetical protein 779213..780130 Francisella tularensis subsp. tularensis FSC198 4199187 YP_666902.1 CDS FTF0760c NC_008245.1 780133 780339 R ORF ftt0760c; lipoprotein complement(780133..780339) Francisella tularensis subsp. tularensis FSC198 4199188 YP_666903.1 CDS FTF0761c NC_008245.1 780424 780717 R ORF ftt0761c; hypothetical protein complement(780424..780717) Francisella tularensis subsp. tularensis FSC198 4199189 YP_666904.1 CDS recF NC_008245.1 780739 781788 R Similar to RECF_PROMI (P22839) DNA replication and repair protein from Proteus mirabilis (362 aa). FASTA: opt: 874 Z-score: 1010.7 E(): 2.1e-48 Smith-Waterman score: 874; 37.394 identity in 353 aa overlap.; DNA replication and repair protein RecF complement(780739..781788) Francisella tularensis subsp. tularensis FSC198 4200603 YP_666905.1 CDS yjjV NC_008245.1 781792 782538 R Similar to YJJV_ECOLI (P39408) Putative deoxyribonuclease yjjV (259 aa). FASTA: opt: 503 Z-score: 595.3 E(): 2.9e-25 Smith-Waterman score: 503; 31.048 identity in 248 aa overlap.; TatD related DNAse family protein complement(781792..782538) Francisella tularensis subsp. tularensis FSC198 4199032 YP_666906.1 CDS glyS NC_008245.1 782731 784815 D Similar to SYGB_COXBU (P45651) Glycyl-tRNA synthetase beta chain from Coxiella burnetii (689 aa). FASTA: opt: 1810 Z-score: 2108.8 E(): 1.4e-109 Smith-Waterman score: 1810; 42.939 identity in 694 aa overlap.; glycyl-tRNA synthetase subunit beta 782731..784815 Francisella tularensis subsp. tularensis FSC198 4200290 YP_666907.1 CDS isftu1 NC_008245.1 784955 785739 D ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and also mariner elements, show that this transposase shares strongly conserved residues, including a fully conserved dipeptide,Asp-Glu (DE), and a block consisting of a fully conserved Asp and highly conserved Glu, separated by 34 or 35 residues (D35E). The conserved dipeptide is only present if ribosomal frameshifting occurs.; transposase join(784955..785281,785281..785739) Francisella tularensis subsp. tularensis FSC198 4199634 YP_666908.1 CDS deoD NC_008245.1 785908 786630 D Similar to Q9PQL0 Purine-nucleoside phosphorylase from Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (239 aa). FASTA: opt: 697 Z-score: 837.2 E(): 9.7e-39 Smith-Waterman score: 697; 47.534 identity in 223 aa overlap.; purine nucleoside phosphorylase 785908..786630 Francisella tularensis subsp. tularensis FSC198 4199346 YP_666909.1 CDS FTF0767c NC_008245.1 786627 787076 R ORF ftt0767c; hypothetical protein complement(786627..787076) Francisella tularensis subsp. tularensis FSC198 4199912 YP_666910.1 CDS FTF0768c NC_008245.1 787080 788108 R ORF ftt0768c; hypothetical protein complement(787080..788108) Francisella tularensis subsp. tularensis FSC198 4199913 YP_666911.1 CDS secA NC_008245.1 788240 790960 D functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 788240..790960 Francisella tularensis subsp. tularensis FSC198 4200733 YP_666912.1 CDS rplU NC_008245.1 793029 793343 D Similar to AAP95195 50S ribosomal protein L21 from Haemophilus ducreyi (103 aa). FASTA: opt: 435 Z-score: 570.3 E(): 7.1e-24 Smith-Waterman score: 435; 66.019 identity in 103 aa overlap.; 50S ribosomal protein L21 793029..793343 Francisella tularensis subsp. tularensis FSC198 4198997 YP_666913.1 CDS rpmA NC_008245.1 793374 793628 D involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 793374..793628 Francisella tularensis subsp. tularensis FSC198 4199002 YP_666914.1 CDS FTF0774 NC_008245.1 794015 794392 D Similar to Q8DJY4 Tll1086 protein from Synechococcus elongatus (Thermosynechococcus elongatus) (126 aa). FASTA: opt: 516 Z-score: 715.9 E(): 5.5e-32 Smith-Waterman score: 516; 64.348 identity in 115 aa overlap. ORF ftt0774; hypothetical protein 794015..794392 Francisella tularensis subsp. tularensis FSC198 4199914 YP_666915.1 CDS rnd NC_008245.1 795628 796722 R Similar to Q8YGF6 Ribonuclease D from Brucella melitensis (385 aa). FASTA: opt: 538 Z-score: 584.5 E(): 1.2e-24 Smith-Waterman score: 538; 28.919 identity in 370 aa overlap.; ribonuclease D complement(795628..796722) Francisella tularensis subsp. tularensis FSC198 4199226 YP_666916.1 CDS uvrC NC_008245.1 796831 798669 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 796831..798669 Francisella tularensis subsp. tularensis FSC198 4200135 YP_666917.1 CDS FTF0778 NC_008245.1 798736 799110 D ORF ftt0778; hypothetical protein 798736..799110 Francisella tularensis subsp. tularensis FSC198 4199915 YP_666918.1 CDS isftu1 NC_008245.1 799188 799972 D ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and also mariner elements, show that this transposase shares strongly conserved residues, including a fully conserved dipeptide,Asp-Glu (DE), and a block consisting of a fully conserved Asp and highly conserved Glu, separated by 34 or 35 residues (D35E). The conserved dipeptide is only present if ribosomal frameshifting occurs.; transposase join(799188..799514,799514..799972) Francisella tularensis subsp. tularensis FSC198 4199635 YP_666919.1 CDS FTF0780c NC_008245.1 800248 800517 R ORF ftt0780c; hypothetical protein complement(800248..800517) Francisella tularensis subsp. tularensis FSC198 4199916 YP_666920.1 CDS FTF0781c NC_008245.1 800507 801220 R Similar to Q82UL5 Hypothetical protein from Nitrosomonas europaea (239 aa). FASTA: opt: 736 Z-score: 920.8 E(): 2.1e-43 Smith-Waterman score: 736; 54.680 identity in 203 aa overlap. The family of possible lysine decarboxylase proteins shares a highly conserved motif PGGXGTXXE that is probably functionally important. This protein has that motif. ORF ftt0781c; hypothetical protein complement(800507..801220) Francisella tularensis subsp. tularensis FSC198 4199917 YP_666921.1 CDS fabI NC_008245.1 801506 802288 D Similar to Q87YS1 Enoyl-(acyl-carrier-protein) reductase from Pseudomonas syringae (pv. tomato) (264 aa). FASTA: opt: 1071 Z-score: 1313.1 E(): 3e-65 Smith-Waterman score: 1071; 62.595 identity in 262 aa overlap.; enoyl-[acyl-carrier-protein] reductase (NADH) 801506..802288 Francisella tularensis subsp. tularensis FSC198 4199682 YP_666922.1 CDS ars NC_008245.1 802435 803397 D Similar to Q9CPJ8 Arylsulfatase from Pasteurella multocida (327 aa). FASTA: opt: 544 Z-score: 669.4 E(): 2.2e-29 Smith-Waterman score: 544; 31.420 identity in 331 aa overlap.; arylsulfatase 802435..803397 Francisella tularensis subsp. tularensis FSC198 4199685 YP_666923.1 CDS FTF0784 NC_008245.1 803409 803738 D ORF ftt0784; hypothetical protein 803409..803738 Francisella tularensis subsp. tularensis FSC198 4199918 YP_666924.1 CDS FTF0785 NC_008245.1 803726 804547 D Similar to Q88K93 Conserved hypothetical protein (277 aa). FASTA: opt: 718 Z-score: 855.8 E(): 8.9e-40 Smith-Waterman score: 718; 42.308identity in 260 aa overlap. ORF ftt0785; hypothetical protein 803726..804547 Francisella tularensis subsp. tularensis FSC198 4199919 YP_666925.1 CDS FTF0786 NC_008245.1 804544 805242 D ORF ftt0786; hypothetical protein 804544..805242 Francisella tularensis subsp. tularensis FSC198 4199920 YP_666926.1 CDS FTF0787 NC_008245.1 805253 805843 D Similar to Q8EDN3 Conserved hypothetical protein from Shewanella oneidensis (197 aa). FASTA: opt: 435 Z-score: 540.9 E(): 3.1e-22 Smith-Waterman score: 435; 42.935 identity in 184 aa overlap. ORF ftt0787; DoxD-like family protein 805253..805843 Francisella tularensis subsp. tularensis FSC198 4199921 YP_666927.1 CDS kdsD NC_008245.1 805847 806830 R Similar to Q8KLW6 Hypothetical protein from Pseudomonas stutzeri (Pseudomonas perfectomarina) (324 aa). FASTA: opt: 1095 Z-score: 1307.1 E(): 6.5e-65 Smith-Waterman score: 1095; 54.489 identity in 323 aa overlap. Homologs are involved in sialic acid capsule biosynthesis in some pathogenic strains of Escherichia coli.; arabinose phosphate isomerase complement(805847..806830) Francisella tularensis subsp. tularensis FSC198 4199508 YP_666928.1 CDS rpe NC_008245.1 806955 807623 D Similar to Q8EK14 Ribulose-phosphate 3-epimerase (225 aa). FASTA: opt: 953 Z-score: 1164.4 E(): 5.8e-57 Smith-Waterman score: 953; 65.766identity in 222 aa overlap.; D-ribulose-phosphate 3-epimerase 806955..807623 Francisella tularensis subsp. tularensis FSC198 4200770 YP_666929.1 CDS FTF0790 NC_008245.1 807604 808998 D Similar to Q9FDJ5 Putative glycosyltransferase from Lactobacillus rhamnosus (466 aa). FASTA: opt: 733 Z-score: 876.0 E(): 6.7e-41 Smith-Waterman score: 733; 33.333 identity in 399 aa overlap. ORF ftt0790; sugar transferase 807604..808998 Francisella tularensis subsp. tularensis FSC198 4199922 YP_666930.1 CDS galE NC_008245.1 808991 810010 D UDP-glucose 4-epimerase 808991..810010 Francisella tularensis subsp. tularensis FSC198 4199208 YP_666931.1 CDS FTF0792 NC_008245.1 810014 811243 D Similar to Q9HTC0 Glycosyltransferase WbpZ from Pseudomonas aeruginosa (381 aa). FASTA: opt: 621 Z-score: 721.7 E(): 2.6e-32 Smith-Waterman score: 1019; 38.725 identity in 408 aa overlap. ORF ftt0792; glycosyl transferases group 1 family protein 810014..811243 Francisella tularensis subsp. tularensis FSC198 4199923 YP_666932.1 CDS FTF0793 NC_008245.1 811240 812922 D Similar to Q8DMA7 ATP-binding protein of ABC transporter from Synechococcus elongatus (Thermosynechococcus elongatus) (610 aa). FASTA: opt: 1084 Z-score: 1105.1 E(): 1.2e-53 Smith-Waterman score: 1084; 35.159 identity in 566 aa overlap. ORF ftt0793; ABC transporter ATP-binding and membrane protein 811240..812922 Francisella tularensis subsp. tularensis FSC198 4199924 YP_666933.1 CDS FTF0794 NC_008245.1 812936 814222 D Similar to AAP76675 Phosphoserine phosphatase (EC 3.1.3.3) from Helicobacter hepaticus (199 aa). FASTA: opt: 751 Z-score: 908.2 E(): 1.1e-42 Smith-Waterman score: 751; 55.385 identity in 195 aa overlap (18-212:4-198) AND to AAP76674 Hypothetical protein from Helicobacter hepaticus (213 aa). FASTA: opt: 823 Z-score: 994.3 E(): 1.7e-47 Smith-Waterman score: 823; 57.212 identity in 208 aa overlap (221-428:6-213). Seems to be two genes in some organisms. ORF ftt0794; hypothetical protein 812936..814222 Francisella tularensis subsp. tularensis FSC198 4199925 YP_666934.1 CDS FTF0795 NC_008245.1 814161 814844 D Similar to AAP76671 Hypothetical protein cfa from Helicobacter hepaticus (210 aa). FASTA: opt: 627 Z-score: 745.4 E(): 1.3e-33 Smith-Waterman score: 627; 44.660 identity in 206 aa overlap. ORF ftt0795; hypothetical protein 814161..814844 Francisella tularensis subsp. tularensis FSC198 4199926 YP_666935.1 CDS FTF0796 NC_008245.1 814848 815609 D ORF ftt0796; hypothetical protein 814848..815609 Francisella tularensis subsp. tularensis FSC198 4199927 YP_666936.1 CDS FTF0797 NC_008245.1 815618 816577 D Similar to O85000 Galactosyl transferase from Streptococcus pneumoniae (323 aa). FASTA: opt: 577 Z-score: 682.7 E(): 3.9e-30 Smith-Waterman score: 577; 40.171 identity in 234 aa overlap. Same homolog as for next downstream ORF. ORF ftt0797; glycosyl transferase family protein 815618..816577 Francisella tularensis subsp. tularensis FSC198 4199928 YP_666937.1 CDS FTF0798 NC_008245.1 816594 817601 D Similar to O85000 Galactosyl transferase from Streptococcus pneumoniae (323 aa). FASTA: opt: 499 Z-score: 609.1 E(): 4.9e-26 Smith-Waterman score: 499; 34.454 identity in 238 aa overlap. Same homolog as for next upstream ORF. ORF ftt0798; glycosyl transferase family protein 816594..817601 Francisella tularensis subsp. tularensis FSC198 4199929 YP_666938.1 CDS FTF0799 NC_008245.1 817604 818617 D Similar to Q00481 Second mannosyl transferase from Salmonella enterica (336 aa). FASTA: opt: 651 Z-score: 775.2 E(): 2.7e-35 Smith-Waterman score: 651; 35.455 identity in 330 aa overlap. ORF ftt0799; glycosyl transferases group 1 family protein 817604..818617 Francisella tularensis subsp. tularensis FSC198 4199930 YP_666939.1 CDS FTF0800 NC_008245.1 818636 819298 D Similar to Q8FV27 Hydrolase, haloacid dehalogenase-like family from Brucella suis (234 aa). FASTA: opt: 422 Z-score: 503.3 E(): 3.8e-20 Smith-Waterman score: 422; 33.486identity in 218 aa overlap. ORF ftt0800; haloacid dehalogenase-like hydrolase family protein 818636..819298 Francisella tularensis subsp. tularensis FSC198 4199931 YP_666940.1 CDS FTF0801c NC_008245.1 819580 820686 R Similar to Q9YG89 310AA long hypothetical sugar kinase from Aeropyrum pernix (310 aa). FASTA: opt: 245 Z-score: 292.6 E(): 2.1e-08 Smith-Waterman score: 311; 25.795 identity in 283 aa overlap. ORF ftt0801c; carbohydrate/purine kinase pfkB family protein complement(819580..820686) Francisella tularensis subsp. tularensis FSC198 4199969 YP_666941.1 CDS cphB NC_008245.1 820889 821707 D Similar to CPHB_SYNY8 (P56946) Cyanophycinase from Synechocystis sp. (strain PCC 6308) (272 aa). FASTA: opt: 701 Z-score: 857.3 E(): 7.4e-40 Smith-Waterman score: 701; 41.667 identity in 264 aa overlap.; cyanophycinase 820889..821707 Francisella tularensis subsp. tularensis FSC198 4200274 YP_666942.1 CDS ans NC_008245.1 821923 822786 D Similar to Q9ABX3 Asparaginase family protein from Caulobacter crescentus (292 aa). FASTA: 146 opt: 465 Z-score: 567.7 E(): 1e-23 Smith-Waterman score: 465; 35.606 identity in 264 aa overlap.; asparaginase 821923..822786 Francisella tularensis subsp. tularensis FSC198 4199423 YP_666943.1 CDS FTF0804 NC_008245.1 823458 824714 D Similar to O54543 (O54543) CITA from Legionella pneumophila (418 aa). FASTA: opt: 905 Z-score: 915.1 E(): 4.5e-43 Smith-Waterman score: 905; 33.254 identity in 418 aa overlap. ORF ftt0804; major facilitator transporter 823458..824714 Francisella tularensis subsp. tularensis FSC198 4199970 YP_666944.1 CDS capB NC_008245.1 824790 826007 D Similar to CAD71904 Capsule biosynthesis protein CapB from Rhodopirellula baltica (441 aa). FASTA: opt: 1155 Z-score: 1414.5 E(): 6.8e-71 Smith-Waterman score: 1156; 46.763 identity (50.914 ungapped) in 417 aa overlap.; capsule biosynthesis protein capB 824790..826007 Francisella tularensis subsp. tularensis FSC198 4200313 YP_666945.1 CDS capC NC_008245.1 826032 826496 D Similar to Q8REZ4 CapC protein from Fusobacterium nucleatum (152 aa). FASTA: opt: 360 Z-score: 420.9 E(): 1.5e-15 Smith-Waterman score: 360; 35.616 identity in 146 aa overlap.; capsule biosynthesis protein CapC 826032..826496 Francisella tularensis subsp. tularensis FSC198 4200314 YP_666946.1 CDS FTF0807 NC_008245.1 826498 827709 D Similar to CAD71902 Hypothetical protein from Rhodopirellula baltica (404 aa). FASTA: opt: 477 Z-score: 563.9 E(): 1.6e-23 Smith-Waterman score: 553; 31.633 identity in 392 aa overlap. ORF ftt0807; hypothetical protein 826498..827709 Francisella tularensis subsp. tularensis FSC198 4199971 YP_666947.1 CDS spoT NC_008245.1 827769 829892 D Similar to SPOT_ECOLI Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase from Escherichia coli (702 aa). FASTA: opt: 1849 Z-score: 2107.7 E(): 1.7e-109 Smith-Waterman score: 1849; 41.210 identity in 711 aa overlap.; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase/(p)ppGpp synthase 827769..829892 Francisella tularensis subsp. tularensis FSC198 4199083 YP_666948.1 CDS recR NC_008245.1 829900 830502 R involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR complement(829900..830502) Francisella tularensis subsp. tularensis FSC198 4200607 YP_666949.1 CDS ybaB NC_008245.1 830502 830840 R Similar to YBAB_ECOLI Hypothetical UPF0133 protein ybaB from Escherichia coli (109 aa). FASTA: opt: 332 Z-score: 403.8 E(): 1.3e-14 Smith-Waterman score: 332; 49.074identity in 108 aa overlap.; hypothetical protein complement(830502..830840) Francisella tularensis subsp. tularensis FSC198 4200701 YP_666950.1 CDS murG NC_008245.1 830850 831965 R UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase complement(830850..831965) Francisella tularensis subsp. tularensis FSC198 4200110 YP_666951.1 CDS gcvH2 NC_008245.1 832069 832449 D Similar to GCS1_SULTO Probable glycine cleavage system H from Sulfolobus tokodaii (142 aa). FASTA: opt: 397 Z-score: 525.8 E(): 2.1e-21 Smith-Waterman score: 397; 43.089 identity in 123 aa overlap.; glycine cleavage system protein H 832069..832449 Francisella tularensis subsp. tularensis FSC198 4199278 YP_666952.1 CDS FTF0813 NC_008245.1 832439 832735 D ORF ftt0813; hypothetical protein 832439..832735 Francisella tularensis subsp. tularensis FSC198 4199972 YP_666953.1 CDS FTF0814c NC_008245.1 832821 833420 R ORF ftt0814c; hypothetical protein complement(832821..833420) Francisella tularensis subsp. tularensis FSC198 4199973 YP_666954.1 CDS FTF0815c NC_008245.1 833428 833676 R ORF ftt0815c; hypothetical protein complement(833428..833676) Francisella tularensis subsp. tularensis FSC198 4199974 YP_666955.1 CDS FTF0816c NC_008245.1 833720 834613 R Similar to Q8EHY2 Chitin-binding protein,putative from Shewanella oneidensis (491 aa). FASTA: opt: 532 Z-score: 628.3 E(): 4.2e-27 Smith-Waterman score: 532; 43.500 identity in 200 aa overlap. ORF ftt0816c; chitin binding protein complement(833720..834613) Francisella tularensis subsp. tularensis FSC198 4199975 YP_666956.1 CDS thrS NC_008245.1 835053 836957 D catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 835053..836957 Francisella tularensis subsp. tularensis FSC198 4199143 YP_666957.1 CDS infC NC_008245.1 837033 837500 D Similar to IF3_ECOLI Translation initiation factor IF-3 from Escherichia coli (180 aa). FASTA: opt: 674 Z-score: 836.1 E(): 1.1e-38 Smith-Waterman score: 674; 64.103 identity in 156 aa overlap.; translation initiation factor IF-3 837033..837500 Francisella tularensis subsp. tularensis FSC198 4199611 YP_666958.1 CDS rpmI NC_008245.1 837543 837740 D Similar to RL35_ECOLI 50S ribosomal protein L35 from Escherichia coli (64 aa). FASTA: opt: 247 Z-score: 385.9 E(): 1.3e-13 Smith-Waterman score: 247; 62.500 identity in 64 aa overlap.; 50S ribosomal protein L35 837543..837740 Francisella tularensis subsp. tularensis FSC198 4200324 YP_666959.1 CDS rplT NC_008245.1 837776 838132 D binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 837776..838132 Francisella tularensis subsp. tularensis FSC198 4198996 YP_666960.1 CDS FTF0821 NC_008245.1 838174 838878 D Similar to Q9KRB9 Hypothetical protein VC1723 from Vibrio cholerae (229 aa). FASTA: opt: 344 Z-score: 394.7 E(): 4.3e-14 Smith-Waterman score: 344; 29.075 identity in 227 aa overlap. ORF ftt0821; hypothetical protein 838174..838878 Francisella tularensis subsp. tularensis FSC198 4199976 YP_666961.1 CDS isftu1 NC_008245.1 839170 839954 D ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and also mariner elements, show that this transposase shares strongly conserved residues, including a fully conserved dipeptide,Asp-Glu (DE), and a block consisting of a fully conserved Asp and highly conserved Glu, separated by 34 or 35 residues (D35E). The conserved dipeptide is only present if ribosomal frameshifting occurs.; transposase join(839170..839496,839496..839954) Francisella tularensis subsp. tularensis FSC198 4199636 YP_666962.1 CDS FTF0823 NC_008245.1 840178 840825 D Similar to Q9K8B7 Mutator MutT protein from Bacillus halodurans (207 aa). FASTA: opt: 413 Z-score: 505.4 E(): 2.9e-20 Smith-Waterman score: 413; 36.649identity in 191 aa overlap. ORF ftt0823; MutT protein 840178..840825 Francisella tularensis subsp. tularensis FSC198 4199977 YP_666963.1 CDS arsC1 NC_008245.1 840843 841196 D Similar to Q8CPW9 Arsenate reductase from Staphylococcus epidermidis (117 aa). FASTA: opt: 276 Z-score: 376.2 E(): 4.6e-13 Smith-Waterman score: 276; 32.759 identity in 116 aa overlap.; arsenate reductase 840843..841196 Francisella tularensis subsp. tularensis FSC198 4199686 YP_666964.1 CDS FTF0825c NC_008245.1 841220 841555 R hypothetical lipoprotein, no significant homologs. ORF ftt0825c; hypothetical protein complement(841220..841555) Francisella tularensis subsp. tularensis FSC198 4199978 YP_666965.1 CDS FTF0826c NC_008245.1 841732 841977 R ORF ftt0826c; lipoprotein complement(841732..841977) Francisella tularensis subsp. tularensis FSC198 4199979 YP_666966.1 CDS FTF0827c NC_008245.1 842055 843368 R Similar to YIEG_ECOLI Hypothetical protein yieG from Escherichia coli (445 aa). FASTA: opt: 945 Z-score: 1037.7 E(): 6.6e-50 Smith-Waterman score: 945; 34.633 identity in 436 aa overlap. ORF ftt0827c; hypothetical protein complement(842055..843368) Francisella tularensis subsp. tularensis FSC198 4199980 YP_666967.1 CDS FTF0829c NC_008245.1 845033 846748 R Similar to Q845W9 Aspartate:alanine antiporter from Pseudomonas dacunhae (561 aa). FASTA: opt: 1359 Z-score: 1502.2 bits: 287.8 E(): 8.8e-76 Smith-Waterman score: 1359; 38.351 identity in 558 aa overlap. ORF ftt0829c; aspartate:alanine antiporter complement(845033..846748) Francisella tularensis subsp. tularensis FSC198 4199982 YP_666968.1 CDS FTF0831c NC_008245.1 847903 849156 R Weakly similar to Q8A8H3 Outer membrane protein,OmpA family from Bacteroides thetaiotaomicron (266 aa). FASTA: opt: 184 Z-score: 220.7 E(): 0.00021 Smith-Waterman score: 184; 29.299 identity in 157 aa overlap. ORF ftt0831c; OmpA family protein complement(847903..849156) Francisella tularensis subsp. tularensis FSC198 4199984 YP_666969.1 CDS fkpB NC_008245.1 849348 849812 D Similar to FKBX_ECOLI (P22563) FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase from Escherichia coli (148 aa). FASTA: opt: 357 Z-score: 475.0 E(): 1.4e-18 Smith-Waterman score: 357; 38.129 identity in 139 aa overlap.; FKBP-type 16 kDa peptidyl-prolyl cis-transisomerase 849348..849812 Francisella tularensis subsp. tularensis FSC198 4199411 YP_666970.1 CDS ispH NC_008245.1 849793 850749 D catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 849793..850749 Francisella tularensis subsp. tularensis FSC198 4199304 YP_666971.1 CDS aroQ NC_008245.1 850751 851113 D Similar to CHMU_BACSU Chorismate mutase from Bacillus subtilis (127 aa). FASTA: opt: 360 Z-score: 492.8 E(): 1.5e-19 Smith-Waterman score: 360; 48.305identity in 118 aa overlap.; chorismate mutase 850751..851113 Francisella tularensis subsp. tularensis FSC198 4199439 YP_666972.1 CDS FTF0835 NC_008245.1 851122 851943 D Similar to Q8EBE8 CDP-diacylglycerol--serine O-phosphatidyltransferase from Shewanella oneidensis (269 aa). FASTA: opt: 456 Z-score: 550.1 E(): 9.5e-23 Smith-Waterman score: 564; 37.209 identity in 258 aa overlap. ORF ftt0835; CDP-alcohol phosphatidyltransferase 851122..851943 Francisella tularensis subsp. tularensis FSC198 4199985 YP_666973.1 CDS FTF0836c NC_008245.1 851948 852172 R ORF ftt0836c; hypothetical protein complement(851948..852172) Francisella tularensis subsp. tularensis FSC198 4199986 YP_666974.1 CDS tolQ NC_008245.1 852313 853032 D Similar to TOLQ_ECOLI TolQ protein from Escherichia coli (230 aa). FASTA: opt: 568 Z-score: 690.3 E(): 1.5e-30 Smith-Waterman score: 568; 38.991 identity in 218 aa overlap.; TolQ protein 852313..853032 Francisella tularensis subsp. tularensis FSC198 4199151 YP_666975.1 CDS tolR NC_008245.1 853042 853488 D Similar to TOLR_ECOLI TolR protein from Escherichia coli (142 aa). FASTA: opt: 303 Z-score: 379.2 bits: 76.1 E(): 3.2e-13 Smith-Waterman score: 303; 39.259identity in 135 aa overlap.; TolR protein 853042..853488 Francisella tularensis subsp. tularensis FSC198 4199857 YP_666976.1 CDS tolA NC_008245.1 853475 854386 D FTF0839 Contains similarity to Pfam domain PF06519 (TolA protein), Score=-66.2, E-value=1.4e-05; tolA protein 853475..854386 Francisella tularensis subsp. tularensis FSC198 4199148 YP_666977.1 CDS tolB NC_008245.1 854386 855705 D Similar to TOLB_ECOLI TolB protein precursor from Eschericia coli (430 aa). FASTA: opt: 692 Z-score: 785.2 E(): 7.6e-36 Smith-Waterman score: 717; 31.685identity in 445 aa overlap. TolB appears more highly conserved in other species: potential paralog; TolB protein precursor 854386..855705 Francisella tularensis subsp. tularensis FSC198 4199149 YP_666978.1 CDS FTF0841 NC_008245.1 855709 855960 D ORF ftt0841; lipoprotein 855709..855960 Francisella tularensis subsp. tularensis FSC198 4199987 YP_666979.1 CDS FTF0842 NC_008245.1 855979 856602 D Similar to PAL_ECOLI Peptidoglycan-associated lipoprotein from Escherichia coli (173 aa). FASTA: opt: 306 Z-score: 383.2 E(): 1.9e-13 Smith-Waterman score: 306; 33.333 identity in 162 aa overlap. ORF ftt0842; peptidoglycan-associated lipoprotein 855979..856602 Francisella tularensis subsp. tularensis FSC198 4200006 YP_666980.1 CDS FTF0845 NC_008245.1 858830 859105 D Similar to Q9K315 Hypothetical protein VCA0343 OR VCA029 from Vibrio cholerae (83 aa). FASTA: opt: 250 Z-score: 356.2 E(): 6e-12 Smith-Waterman score: 250; 58.462 identity (58.4620ngapped) in 65 aa overlap. ORF ftt0845; hypothetical protein 858830..859105 Francisella tularensis subsp. tularensis FSC198 4200009 YP_666981.1 CDS FTF0846 NC_008245.1 859086 860585 D Similar to Q9KS67 Deoxyribodipyrimidine photolyase,putative from Vibrio cholerae (504 aa). FASTA: opt: 1071 Z-score: 1263.0 E(): 1.8e-62 Smith-Waterman score: 1097; 37.817 identity in 513 aa overlap. ORF ftt0846; deoxyribodipyrimidine photolyase 859086..860585 Francisella tularensis subsp. tularensis FSC198 4200010 YP_666982.1 CDS FTF0847 NC_008245.1 860639 862114 D Similar to Q8U6P2 Hypothetical protein Atu4765 (507 aa). FASTA: opt: 1800 Z-score: 2192.9 415.3 E(): 3e-114 Smith-Waterman score: 1800; 53.608identity in 485 aa overlap. ORF ftt0847; hypothetical protein 860639..862114 Francisella tularensis subsp. tularensis FSC198 4200011 YP_666983.1 CDS FTF0848 NC_008245.1 862111 862248 D Similar to Q8P3G1 Hypothetical protein XCC4110 from Xanthomonas campestris (51 aa). FASTA: opt: 243 Z-score: 366.5 E(): 1.6e-12 Smith-Waterman score: 243; 63.636 identity in 44 aa overlap ORF ftt0848; hypothetical protein 862111..862248 Francisella tularensis subsp. tularensis FSC198 4200012 YP_666984.1 CDS FTF0849 NC_008245.1 862374 863303 D Similar to Q81YH5 Bile acid transporter family protein from Bacillus anthracis (322 aa). FASTA: initn: 551 init1: 399 opt: 605 Z-score: 641.1 E(): 8.1e-28 Smith-Waterman score: 605; 32.432identity in 296 aa overlap. ORF ftt0849; bile acid symporter family protein 862374..863303 Francisella tularensis subsp. tularensis FSC198 4200013 YP_666985.1 CDS FTF0850 NC_008245.1 863353 863976 D Similar to Q930D7 Hypothetical protein RA0261 Rhizobium meliloti (222 aa). FASTA: opt: 521 Z-score: 614.9 E(): 2.3e-26 Smith-Waterman score: 521; 42.424 identity in 198 aa overlap. ORF ftt0850; hypothetical protein 863353..863976 Francisella tularensis subsp. tularensis FSC198 4200014 YP_666986.1 CDS FTF0851 NC_008245.1 864000 864758 D Similar to Q83C04 Membrane protein, putative from Coxiella burnetii (263 aa). FASTA: opt: 338 Z-score: 387.6 E(): 1.1e-13 Smith-Waterman score: 341; 28.625 identity in 269 aa overlap. ORF ftt0851; hypothetical protein 864000..864758 Francisella tularensis subsp. tularensis FSC198 4200015 YP_666987.1 CDS FTF0853 NC_008245.1 866452 867690 D Similar to Q8PY17 Arsenite permease from Methanosarcina mazei (420 aa). FASTA: opt: 1294 Z-score: 1359.3 E(): 8e-68 Smith-Waterman score: 1294; 49.144 identity in 409 aa overlap. ORF ftt0853; arsenite permease family protein 866452..867690 Francisella tularensis subsp. tularensis FSC198 4200017 YP_666988.1 CDS FTF0854c NC_008245.1 867669 868091 R Similar to Q8EM34 Hypothetical conserved protein from Oceanobacillus iheyensis (123 aa). FASTA: opt: 271 Z-score: 341.6 E(): 3.9e-11 Smith-Waterman score: 271; 37.190 identity in 121 aa overlap. ORF ftt0854c; hypothetical protein complement(867669..868091) Francisella tularensis subsp. tularensis FSC198 4200018 YP_666989.1 CDS FTF0855c NC_008245.1 868111 868470 R Weakly similar to Q9KR35 Hypothetical protein VC1812 from Vibrio cholerae (139 aa). FASTA: opt: 184 Z-score: 256.0 E(): 2.3e-06 Smith-Waterman score: 184; 29.245 identity in 106 aa overlap. ORF ftt0855c; hypothetical protein complement(868111..868470) Francisella tularensis subsp. tularensis FSC198 4200019 YP_666990.1 CDS ubiA NC_008245.1 868484 869338 R UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin; 4-hydroxybenzoate polyprenyltransferase complement(868484..869338) Francisella tularensis subsp. tularensis FSC198 4198976 YP_666991.1 CDS FTF0857c NC_008245.1 869341 869847 R Weakly similar to similar to Q83F94 Chorismate--pyruvate lyase, putative from Coxiella burnetii (185 aa). FASTA: opt: 178 Z-score: 231.0 E(): 5.6e-05 Smith-Waterman score: 178; 27.215identity in 158 aa overlap ORF ftt0857c; hypothetical protein complement(869341..869847) Francisella tularensis subsp. tularensis FSC198 4200020 YP_666992.1 CDS rph NC_008245.1 869946 870653 D RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 869946..870653 Francisella tularensis subsp. tularensis FSC198 4200771 YP_666993.1 CDS FTF0859c NC_008245.1 870707 871030 R ORF ftt0859c; hypothetical protein complement(870707..871030) Francisella tularensis subsp. tularensis FSC198 4200021 YP_666994.1 CDS FTF0860c NC_008245.1 871135 871386 R ORF ftt0860c; hypothetical protein complement(871135..871386) Francisella tularensis subsp. tularensis FSC198 4200022 YP_666995.1 CDS FTF0861c NC_008245.1 871449 872042 R Similar to FMA2_BACNO (P17824) Fimbrial protein precursor (Pilin) from Bacteroides nodosus (Dichelobacter nodosus) (160 aa). FASTA: opt: 169 Z-score: 222.1 E(): 0.00018 Smith-Waterman score: 169; 34.646 identity in 127 aa overlap The pili fiber building block protein has a highly distinct primary structure; a short positively charged leader sequence, and a highly conserved and highly hydrophobic amino-terminal domain which forms the core of the pilus fiber; A variety of studies suggest that the invariant glycine (G) at -1 is required for prepilin cleavage and assembly and that the glutamate (E) at + 5 is essential for assembly and efficient N-terminal methylation but not cleavage. The region near the carboxy terminus is often hydrophilic and is stabilized by one or two disulfide bridges that may be involved in recognition of receptors. The genes with these characteristics are usually termed pilA, pilE, pilV, pilW, pilX and FimU. (Mattick John S.. 'Type IV Pili and twitching motility'. Annu. Rev. Microbiol. 2002. 56:289-314.) This protein has all the characteristics described above, but shows a weak global homology. ORF ftt0861c; Type IV pili fiber building block protein complement(871449..872042) Francisella tularensis subsp. tularensis FSC198 4200023 YP_666996.1 CDS htpX NC_008245.1 872147 873220 R putative metalloprotease; heat shock protein HtpX complement(872147..873220) Francisella tularensis subsp. tularensis FSC198 4200648 YP_666997.1 CDS FTF0863c NC_008245.1 873224 873799 R Similar to Q83DZ3 LemA protein from Coxiella burnetii (192 aa) initn: 723 init1: 655 opt: 732 Z-score: 803.2 bits: 155.4 E(): 7.6e-37 Smith-Waterman score: 732; 60.417 identity in 192 aa overlap. ORF ftt0863c; LemA-like protein complement(873224..873799) Francisella tularensis subsp. tularensis FSC198 4200024 YP_666998.1 CDS FTF0864c NC_008245.1 873847 874743 R Similar to Q87XZ5 Transcriptional regulator, LysR family, from Pseudomonas syringae (308 aa). FASTA: opt: 591 Z-score: 726.5 E(): 1.4e-32 Smith-Waterman score: 591; 34.948 identity in 289 aa overlap. ORF ftt0864c; LysR family transcriptional regulator complement(873847..874743) Francisella tularensis subsp. tularensis FSC198 4200025 YP_666999.1 CDS isftu2 NC_008245.1 876718 877461 D ISFtu2. Transposase, member of the IS5 family. Identical to Q8GM03 putative transposase from Francisella tularensis (247 aa).; transposase 876718..877461 Francisella tularensis subsp. tularensis FSC198 4199291 YP_667000.1 CDS FTF0868c NC_008245.1 878966 879331 R Similar to Q9RA93 ArsR from Sinorhizobium sp. As4 (115 aa). FASTA: opt: 185 Z-score: 259.0 bits: 53.3 E(): 1.6e-06 Smith-Waterman score: 185; 27.184 identity in 103 aa overlap. ORF ftt0868c; arsenical restistance operon repressor complement(878966..879331) Francisella tularensis subsp. tularensis FSC198 4199594 YP_667001.1 CDS FTF0869 NC_008245.1 879474 880127 D ORF ftt0869; hypothetical protein 879474..880127 Francisella tularensis subsp. tularensis FSC198 4199595 YP_667002.1 CDS FTF0870c NC_008245.1 880139 880270 R ORF ftt0870c; hypothetical protein complement(880139..880270) Francisella tularensis subsp. tularensis FSC198 4199596 YP_667003.1 CDS gpsA NC_008245.1 880447 881445 D NAD(P)+; catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 880447..881445 Francisella tularensis subsp. tularensis FSC198 4200296 YP_667004.1 CDS FTF0872c NC_008245.1 881446 881982 R ORF ftt0872c; hypothetical protein complement(881446..881982) Francisella tularensis subsp. tularensis FSC198 4199597 YP_667005.1 CDS radA NC_008245.1 881987 883357 R Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA complement(881987..883357) Francisella tularensis subsp. tularensis FSC198 4200595 YP_667006.1 CDS FTF0874c NC_008245.1 883365 884135 R ORF ftt0874c; hypothetical protein complement(883365..884135) Francisella tularensis subsp. tularensis FSC198 4199598 YP_667007.1 CDS FTF0875c NC_008245.1 884132 884731 R Similar to YOHD_ECOLI (P33366) Hypothetical protein yohD from Escherichia coli (192 aa). FASTA: opt: 311 Z-score: 379.7 bits: 77.1 E(): 2.9e-13 Smith-Waterman score: 311; 24.870 identity (25.806 ungapped) in 193 aa overlap. ORF ftt0875c; hypothetical protein complement(884132..884731) Francisella tularensis subsp. tularensis FSC198 4199599 YP_667008.1 CDS aroC NC_008245.1 884734 885792 R catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase complement(884734..885792) Francisella tularensis subsp. tularensis FSC198 4199433 YP_667009.1 CDS FTF0877c NC_008245.1 885957 886586 R ORF ftt0877c; hypothetical protein complement(885957..886586) Francisella tularensis subsp. tularensis FSC198 4199600 YP_667010.1 CDS msrB NC_008245.1 886605 887117 R this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B complement(886605..887117) Francisella tularensis subsp. tularensis FSC198 4200102 YP_667011.1 CDS sodC NC_008245.1 887278 887835 D superoxide dismutase (Cu-Zn) precusor. Identical to SODC_FRATU from F. tularensis LVS.; superoxide dismuate (Cu-Zn) precusor 887278..887835 Francisella tularensis subsp. tularensis FSC198 4199078 YP_667012.1 CDS FTF0881c NC_008245.1 888603 889997 R Similar to AAP09927 Arginine permease from Bacillus cereus (474 aa). FASTA: opt: 1041 Z-score: 1224.1 E(): 2.5e-60 Smith-Waterman score: 1041; 35.604 identity in 455 aa overlap. ORF ftt0881c; amino acid permease complement(888603..889997) Francisella tularensis subsp. tularensis FSC198 4199602 YP_667013.1 CDS aspC1 NC_008245.1 891762 892952 R catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase complement(891762..892952) Francisella tularensis subsp. tularensis FSC198 4199689 YP_667014.1 CDS FTF0885 NC_008245.1 893241 894020 D Similar to Q8D6R6 Predicted Co/Zn/Cd cation transporter from Vibrio vulnificus (297 aa). FASTA: opt: 344 Z-score: 414.1 E(): 3.3e-15 Smith-Waterman score: 344; 25.296 identity in 253 aa overlap. ORF ftt0885; cation transporter 893241..894020 Francisella tularensis subsp. tularensis FSC198 4199605 YP_667015.1 CDS FTF0886 NC_008245.1 894126 895775 D Similar to P52118 DNA repair protein recN (Recombination protein (554 aa) fasta scores; opt: 1371 Z-score: 1221.7 E(): 3.4e-60 Smith-Waterman score: 1371; 39.674 identity in 552 aa overlap. ORF ftt0886; DNA repair protein recN 894126..895775 Francisella tularensis subsp. tularensis FSC198 4199606 YP_667016.1 CDS FTF0887c NC_008245.1 896347 896721 R ORF ftt0887c; hypothetical protein complement(896347..896721) Francisella tularensis subsp. tularensis FSC198 4199607 YP_667017.1 CDS FTF0888c NC_008245.1 896714 897310 R Similar to Q59607 Pilin precursor from Neisseria gonorrhoeae (169 aa). FASTA: opt: 244 Z-score: 305.7 E(): 3.5e-09 Smith-Waterman score: 244; 30.435 identity in 138 aa overlap. The pili fiber building block protein has a highly distinct primary structure; a short positively charged leader sequence, and a highly conserved and highly hydrophobic amino-terminal domain which forms the core of the pilus fiber; A variety of studies suggest that the invariant glycine (G) at -1 is required for prepilin cleavage and assembly and that the glutamate (E) at + 5 is essential for assembly and efficient N-terminal methylation but not cleavage. The region near the carboxy terminus is often hydrophilic and is stabilized by one or two disulfide bridges that may be involved in recognition of receptors. The genes with these characteristics are usually termed pilA, pilE, pilV, pilW, pilX and FimU. (Mattick John S.. 'Type IV Pili and twitching motility'. Annu. Rev. Microbiol. 2002. 56:289-314.) This protein has all the characteristics described above. ORF ftt0888c; Type IV pili fiber building block protein complement(896714..897310) Francisella tularensis subsp. tularensis FSC198 4199608 YP_667018.1 CDS FTF0889c NC_008245.1 897980 898420 R Similar to Q820M2 Fimbrial protein pilin:bacterial general secretion pathway protein H from Nitrosomonas europaea (136 aa). FASTA: opt: 216 Z-score: 280.1 E(): 1e-07 Smith-Waterman score: 218; 32.639 identity in 144 aa overlap. The pili fiber building block protein has a highly distinct primary structure; a short positively charged leader sequence, and a highly conserved and highly hydrophobic amino-terminal domain which forms the core of the pilus fiber; A variety of studies suggest that the invariant glycine (G) at -1 is required for prepilin cleavage and assembly and that the glutamate (E) at + 5 is essential for assembly and efficient N-terminal methylation but not cleavage. The region near the carboxy terminus is often hydrophilic and is stabilized by one or two disulfide bridges that may be involved in recognition of receptors. The genes with these characteristics are usually termed pilA, pilE, pilV, pilW, pilX and FimU. (Mattick John S.. 'Type IV Pili and twitching motility'. Annu. Rev. Microbiol. 2002. 56:289-314.) This protein has all the characteristics described above. ORF ftt0889c; Type IV pili fiber building block protein complement(897980..898420) Francisella tularensis subsp. tularensis FSC198 4199363 YP_667019.1 CDS FTF0890c NC_008245.1 898551 898958 R Similar to Q8Y1X9 Type 4 fimbrial pilin signal peptide protein from Ralstonia solanacearum (168 aa). FASTA: opt: 278 Z-score: 327.6 E(): 2.1e-10 Smith-Waterman score: 292; 38.095identity in 147 aa overlap. The pili fiber building block protein has a highly distinct primary structure; a short positively charged leader sequence, and a highly conserved and highly hydrophobic amino-terminal domain which forms the core of the pilus fiber; A variety of studies suggest that the invariant glycine (G) at -1 is required for prepilin cleavage and assembly and that the glutamate (E) at + 5 is essential for assembly and efficient N-terminal methylation but not cleavage. The region near the carboxy terminus is often hydrophilic and is stabilized by one or two disulfide bridges that may be involved in recognition of receptors. The genes with these characteristics are usually termed pilA, pilE, pilV, pilW,pilX and FimU. (Mattick John S.. 'Type IV Pili and twitching motility'. Annu. Rev. Microbiol. 2002. 56:289-314.) This protein has all the characteristics described above. ORF ftt0890c; Type IV pili fiber building block protein complement(898551..898958) Francisella tularensis subsp. tularensis FSC198 4199364 YP_667020.1 CDS FTF0891 NC_008245.1 899342 900061 D Similar to Q98NS1 Hypothetical protein mlr0012 from Rhizobium loti (244 aa). FASTA: opt: 327 Z-score: 404.4 bits: 82.2 E(): 1.2e-14 Smith-Waterman score: 327; 32.308 identity in 195 aa overlap. ORF ftt0891; hypothetical protein 899342..900061 Francisella tularensis subsp. tularensis FSC198 4199365 YP_667021.1 CDS folD NC_008245.1 900200 901048 D catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 900200..901048 Francisella tularensis subsp. tularensis FSC198 4199416 YP_667022.1 CDS purM NC_008245.1 901282 902325 D catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 901282..902325 Francisella tularensis subsp. tularensis FSC198 4199122 YP_667023.1 CDS purCD NC_008245.1 902325 904637 D Amino acids 1-327 (PurC) similar to AAR06292 SAICAR synthetase from Nicotiana tabacum (399 aa). BLAST: Expect = e-105 Identities = 187/322 (58), Positives = 236/322 (73), Gaps = 6/322 (1). Amino acids 328-770 (PurD) similar to ZP_00077753 Phosphoribosylamine-glycine ligase from Methanosarcina barkeri (433). BLAST: Expect = e-108 Identities = 204/436 (46), Positives = 285/436 (65), Gaps = 3/436 (0); fusion protein PurC/PurD 902325..904637 Francisella tularensis subsp. tularensis FSC198 4199116 YP_667024.1 CDS purN NC_008245.1 904641 905216 D Similar to Q8DBC3 Folate-dependent phosphoribosylglycinamide formyltransferase from Vibrio vulnificus (212 aa). FASTA: opt: 530 Z-score: 633.0 E(): 2.1e-27 Smith-Waterman score: 530; 45.263 identity in 190 aa overlap.; phosphoribosylglycinamide formyltransferase 904641..905216 Francisella tularensis subsp. tularensis FSC198 4199123 YP_667025.1 CDS purE NC_008245.1 905333 905824 D Similar to P72157 Phosphoribosylaminoimidazole carboxylase catalytic subunit from Psudomonas aeruginosa (163 aa). FASTA: opt: 719 Z-score: 894.1 E(): 6.6e-42 Smith-Waterman score: 719; 70.988 identity n 162 aa overlap; phosphoribosylaminoimidazole carboxylase,catalyic subunit 905333..905824 Francisella tularensis subsp. tularensis FSC198 4199117 YP_667026.1 CDS purK NC_008245.1 905828 906925 D With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit 905828..906925 Francisella tularensis subsp. tularensis FSC198 4199120 YP_667027.1 CDS FTF0898c NC_008245.1 906922 907275 R Similar to Q88N88 Conserved hypothetical protein TIGR002 from Pseudomonas putida (124 aa). FASTA: opt: 291 Z-score: 402.6 E(): 1.6e-14 Smith-Waterman score: 291; 38.938 identity in 113 aa overlap. ORF ftt0898c; hypothetical protein complement(906922..907275) Francisella tularensis subsp. tularensis FSC198 4199366 YP_667028.1 CDS prlC NC_008245.1 907342 909363 R Similar to P27298 Oligopeptidase A from Escherichia coli (680 aa). FASTA: opt: 1936 Z-score: 2040.0 E(): 8.9e-106 Smith-Waterman score: 1936; 43.722 identity in 677 aa overlap.; oligopeptidase A complement(907342..909363) Francisella tularensis subsp. tularensis FSC198 4199941 YP_667029.1 CDS FTF0900 NC_008245.1 909455 909826 D ORF ftt0900; hypothetical protein 909455..909826 Francisella tularensis subsp. tularensis FSC198 4199367 YP_667030.1 CDS lpnA NC_008245.1 909907 910356 D Paralog to conserved hypothetical lipoprotein lpnB.; lipoprotein 909907..910356 Francisella tularensis subsp. tularensis FSC198 4199567 YP_667031.1 CDS FTF0902 NC_008245.1 910515 910994 D paralog of FTF0903 ORF ftt0902; hypothetical protein 910515..910994 Francisella tularensis subsp. tularensis FSC198 4199368 YP_667032.1 CDS FTF0903 NC_008245.1 911094 911597 D paralog of FTF0902 ORF ftt0903; hypothetical protein 911094..911597 Francisella tularensis subsp. tularensis FSC198 4199369 YP_667033.1 CDS lpnB NC_008245.1 911630 912097 D Similar to P18149 17 kDa major membrane protein precursor from Francisella tularensis ssp. holarctica strain LVS (149 aa). FASTA: opt: 274 Z-score: 359.1 E(): 4.1e-12 Smith-Waterman score: 274; 32.468 identity (33.5570ngapped) in 154 aa overlap. Paralog to conserved hypothetical lipoprotein lpnA.; lipoprotein 911630..912097 Francisella tularensis subsp. tularensis FSC198 4199568 YP_667034.1 CDS FTF0905 NC_008245.1 912170 913612 D Similar to Q8KQ19 PilO from Pseudomonas aeruginosa (461 aa). FASTA: opt: 283 Z-score: 329.7 E(): 1.6e-10 Smith-Waterman score: 283; 25.284 identity in 352 aa overlap. PilO is required for glycosylation of Pseudomonas aeruginosa pilin. ORF ftt0905; Type IV pili glycosylation protein 912170..913612 Francisella tularensis subsp. tularensis FSC198 4199370 YP_667035.1 CDS topA NC_008245.1 913666 915960 R catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining; maintains net negative superhelicity; DNA topoisomerase I complement(913666..915960) Francisella tularensis subsp. tularensis FSC198 4199858 YP_667036.1 CDS parA NC_008245.1 916159 916800 D Similar to Q9F260 Partition protein from Actinobacillus actinomycetemcomitans (213 aa). FASTA: opt: 286 Z-score: 339.2 E(): 4.8e-11 mith-Waterman score: 286; 29.245 identity in 212 aa overlap; chmomosome partition protein A 916159..916800 Francisella tularensis subsp. tularensis FSC198 4200093 YP_667037.1 CDS parB NC_008245.1 916793 917707 D Similar to Q9CJA4 Chromosome partitioning protein from Lactococcus lactis (261 aa). FASTA: opt: 399 Z-score: 442.0 E(): 9e-17 Smith-Waterman score: 399; 33.333 identity in 264 aa overlap; chromosome partition protein B 916793..917707 Francisella tularensis subsp. tularensis FSC198 4200094 YP_667038.1 CDS FTF0909 NC_008245.1 917721 918428 D Similar to Q88LT5 Glutamine amidotransferase, class I from Pseudomonas putida (244 aa). FASTA: opt: 589 Z-score: 771.5 bits: 150.1 E(): 4.4e-35 Smith-Waterman score: 589; 36.325identity in 234 aa overlap. ORF ftt0909; glutamine amidotransferase 917721..918428 Francisella tularensis subsp. tularensis FSC198 4199371 YP_667039.1 CDS FTF0910 NC_008245.1 918431 919312 D Weakly similar to Q8GNM7 Lysophospholipase A from Legionella pneumophila (309 aa). FASTA: 86 opt: 302 Z-score: 378.8 bits: 78.1 E(): 3.3e-13 Smith-Waterman score: 360; 29.795 identity in 292 aa overlap. ORF ftt0910; hypothetical protein 918431..919312 Francisella tularensis subsp. tularensis FSC198 4199372 YP_667040.1 CDS FTF0911 NC_008245.1 919309 919899 D Similar with Q87NK1 Hypothetical protein from Vibrio parahaemolyticus (195 aa) fasta scores; opt: 523 Z-score: 649.0 E(): 2.7e-28 Smith-Waterman score: 523; 42.857 identity in 189 aa overlap ORF ftt0911; hypothetical protein 919309..919899 Francisella tularensis subsp. tularensis FSC198 4199373 YP_667041.1 CDS rrmJ NC_008245.1 919959 920579 R Similar to Q8EHM3 Ribosomal RNA large subunit methyltransferase J from Shewanella oneidensis (209 aa). FASTA: opt: 730 Z-score: 844.0 E(): 3.7e-39 Smith-Waterman score: 730; 53.202identity in 203 aa overlap; ribosomal large subunit methyltransferase J complement(919959..920579) Francisella tularensis subsp. tularensis FSC198 4198962 YP_667042.1 CDS FTF0913 NC_008245.1 920737 921204 D ORF ftt0913; hypothetical protein 920737..921204 Francisella tularensis subsp. tularensis FSC198 4199374 YP_667043.1 CDS lspA NC_008245.1 921199 921684 R lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase complement(921199..921684) Francisella tularensis subsp. tularensis FSC198 4199651 YP_667044.1 CDS ileS NC_008245.1 921671 924478 R IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase complement(921671..924478) Francisella tularensis subsp. tularensis FSC198 4200661 YP_667045.1 CDS ribF NC_008245.1 924571 925491 R Similar to Q9CKF8 RibF from Pasteurella multocida (311 aa). FASTA: opt: 845 Z-score: 994.4 E(): 1.5e-47 Smith-Waterman score: 845; 44.481 identity in 308 aa overlap; riboflavin biosynthesis protein RibF complement(924571..925491) Francisella tularensis subsp. tularensis FSC198 4199216 YP_667046.1 CDS maeA NC_008245.1 925642 927456 D malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; malate dehydrogenase 925642..927456 Francisella tularensis subsp. tularensis FSC198 4199656 YP_667047.1 CDS FTF0918 NC_008245.1 927619 929292 D ORF ftt0918; hypothetical protein 927619..929292 Francisella tularensis subsp. tularensis FSC198 4199375 YP_667048.1 CDS FTF0919 NC_008245.1 929309 930754 D ORF ftt0919; hypothetical protein 929309..930754 Francisella tularensis subsp. tularensis FSC198 4199376 YP_667049.1 CDS isftu1 NC_008245.1 930889 931673 D ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and also mariner elements, show that this transposase shares strongly conserved residues, including a fully conserved dipeptide,Asp-Glu (DE), and a block consisting of a fully conserved Asp and highly conserved Glu, separated by 34 or 35 residues (D35E). The conserved dipeptide is only present if ribosomal frameshifting occurs.; transposase join(930889..931215,931215..931673) Francisella tularensis subsp. tularensis FSC198 4199637 YP_667050.1 CDS FTF0922 NC_008245.1 932841 933395 D Similarity to Q98JM3 Probable fatty acid hydroxylase from Rhizobium loti (164 aa). FASTA: opt: 305 Z-score: 383.8 E(): 1.6e-13 Smith-Waterman score: 305; 31.902 identity in 163 aa overlap. ORF ftt0922; fatty acid hydroxylase 932841..933395 Francisella tularensis subsp. tularensis FSC198 4199378 YP_667051.1 CDS rlmL NC_008245.1 933470 935623 D catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA; 23S rRNA m(2)G2445 methyltransferase 933470..935623 Francisella tularensis subsp. tularensis FSC198 4199379 YP_667052.1 CDS FTF0924 NC_008245.1 935725 936123 D ORF ftt0924; hypothetical protein 935725..936123 Francisella tularensis subsp. tularensis FSC198 4199380 YP_667053.1 CDS fmt NC_008245.1 936128 937069 D Similarity to P44787 Methionyl-tRNA formyltransferase from Haemophilus ducreyi (318 aa). FASTA: opt: 949 Z-score: 1086.2 E(): 1.2e-52 Smith-Waterman score: 958; 48.387 identity in 310 aa overlap; methionyl-tRNA formyltransferase 936128..937069 Francisella tularensis subsp. tularensis FSC198 4199412 YP_667054.1 CDS gshB NC_008245.1 937073 938047 D catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 937073..938047 Francisella tularensis subsp. tularensis FSC198 4200363 YP_667055.1 CDS hemL NC_008245.1 938037 939332 D Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 938037..939332 Francisella tularensis subsp. tularensis FSC198 4200378 YP_667056.1 CDS FTF0928c NC_008245.1 939353 941020 R SImilar to Q8RD12 Beta-glucosidase-related glycosidases from Thermoanaerobacter tengcongensis (591 aa). FASTA: opt: 1047 Z-score: 1141.5 E(): 9.9e-56 Smith-Waterman score: 1062; 35.106 identity in 564 aa overlap. ORF ftt0928c; beta-glucosidase complement(939353..941020) Francisella tularensis subsp. tularensis FSC198 4199381 YP_667057.1 CDS FTF0931 NC_008245.1 942762 944021 D Similar to Q89YS8 Glucose/galactose transporter from Bacteroides thetaiotaomicron (415 aa). FASTA: opt: 1125 Z-score: 1176.3 bits: 226.6 E(): 1.3e-57 Smith-Waterman score: 1125; 41.446 identity in 415 aa overlap ORF ftt0931; major facilitator transporter 942762..944021 Francisella tularensis subsp. tularensis FSC198 4200027 YP_667058.1 CDS FTF0932 NC_008245.1 944056 944907 D Similar to Q8A1Q9 ROK family transcriptional repressor from Bacteroides thetaiotaomicron (298 aa). FASTA: opt: 482 Z-score: 605.6 E(): 7.7e-26 Smith-Waterman score: 482; 30.769 identity in 286 aa overlap ORF ftt0932; ROK family protein 944056..944907 Francisella tularensis subsp. tularensis FSC198 4200028 YP_667059.1 CDS bioD NC_008245.1 945833 946510 R Similar to AAO90524 Dethiobiotin synthetase from Coxiella burnetii (242 aa). FASTA: opt: 464 Z-score: 551.2 E(): 7.5e-23 Smith-Waterman score: 464; 34.498 identity in 229 aa overlap; dethiobiotin synthetase complement(945833..946510) Francisella tularensis subsp. tularensis FSC198 4200306 YP_667060.1 CDS bioC NC_008245.1 946514 947251 R Similar to AAO90525 Biotin synthesis protein BioC,putative from Coxiella burnetii (248 aa) FASTA: opt: 232 Z-score: 273.5 E(): 2.2e-07 Smith-Waterman score: 232; 23.293 identity in 249 aa overlap; biotin synthesis protein BioC complement(946514..947251) Francisella tularensis subsp. tularensis FSC198 4200305 YP_667061.1 CDS bioF NC_008245.1 947229 948356 R Similar to AAO90527 8-amino-7-oxononanoate synthase (384 aa) fasta scores; opt: 763 Z-score: 912.3 E(): 5.8e-43 Smith-Waterman score: 763; 39.053identity in 338 aa overlap; 8-amino-7-oxononanoate synthase complement(947229..948356) Francisella tularensis subsp. tularensis FSC198 4200307 YP_667062.1 CDS bioB NC_008245.1 948350 949291 R Similar to AAO90528 Biotin synthase from Coxiella burnetii (321 aa) FASTA: opt: 1220 Z-score: 1430.1 E(): 8.3e-72 Smith-Waterman score: 1220; 60.396 identity in 303 aa overlap; biotin synthase complement(948350..949291) Francisella tularensis subsp. tularensis FSC198 4199704 YP_667063.1 CDS bioA NC_008245.1 949337 950668 D Similar to AAO90529 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase from Coxiella burnetii (442 aa). FASTA: opt: 1486 Z-score: 1733.9 E(): 9.9e-89 Smith-Waterman score: 1486; 50.588 identity in 425 aa overlap; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 949337..950668 Francisella tularensis subsp. tularensis FSC198 4199703 YP_667064.1 CDS add1 NC_008245.1 950778 951722 R catalyzes the formation of inosine from adenosine; adenosine deaminase complement(950778..951722) Francisella tularensis subsp. tularensis FSC198 4199756 YP_667065.1 CDS FTF0940c NC_008245.1 951870 952370 R Similar to Q88CI3 Conserved hypothetical protein from Pseudomonas putida (160 aa). FASTA: opt: 297 Z-score: 384.8 E(): 1.4e-13 Smith-Waterman score: 297; 32.653 identity in 147 aa overlap ORF ftt0940c; hypothetical protein complement(951870..952370) Francisella tularensis subsp. tularensis FSC198 4200030 YP_667066.1 CDS FTF0941c NC_008245.1 952386 953306 R Similar to Q97VW1 Lipase (lipP-1) from Sulfolobus solfataricus (305 aa). FASTA: opt: 488 Z-score: 622.4 E(): 8.9e-27 Smith-Waterman score: 488; 32.990 identity in 291 aa overlap. ORF ftt0941c; lipase/esterase complement(952386..953306) Francisella tularensis subsp. tularensis FSC198 4200031 YP_667067.1 CDS folK NC_008245.1 953319 954584 R Similar to Q821E2 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate synthase from Chlamydophila caviae (447 aa). FASTA: opt: 517 Z-score: 602.2 E(): 1.2e-25 Smith-Waterman score: 604; 30.664 identity in 437 aa overlap; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase complement(953319..954584) Francisella tularensis subsp. tularensis FSC198 4199418 YP_667068.1 CDS folB NC_008245.1 954586 954939 R Similar to O84620 Probable dihydroneopterin aldolase (124 aa) fasta scores; opt: 191 Z-score: 262.4 E(): 9.2e-07 Smith-Waterman score: 191; 30.189identity in 106 aa overlap; dihydroneopterin aldolase complement(954586..954939) Francisella tularensis subsp. tularensis FSC198 4199414 YP_667069.1 CDS FTF0944 NC_008245.1 955009 956391 D Similar to Q9CHK3 O-succinylbenzoic acid-CoA ligase from Lactococcus lactis (420 aa). opt: 373 Z-score: 423.0 E(): 1e-15 Smith-Waterman score: 434; 27.692 identity in 390 aa overlap ORF ftt0944; AMP-binding family protein 955009..956391 Francisella tularensis subsp. tularensis FSC198 4200032 YP_667070.1 CDS FTF0945 NC_008245.1 956384 958147 D Similar to Q8ESD8 Para-aminobenzoate synthase component II (585 aa) fasta scores; opt: 1108 Z-score: 1235.5 E(): 5.7e-61 Smith-Waterman score: 1108; 33.851 identity in 579 aa overlap. ORF ftt0945; chorismate binding family protein 956384..958147 Francisella tularensis subsp. tularensis FSC198 4200033 YP_667071.1 CDS trpG1 NC_008245.1 958149 958703 D Similarity to Q972A0 Putative anthranilate synthase component from Sulfolobus tokodaii (193 aa). FASTA: opt: 499 Z-score: 620.3 E(): 1.1e-26 Smith-Waterman score: 499; 40.741 identity in 189 aa overlap. Closely related to pabA proteins as they possess a shared domain feature; anthranilate synthase component II 958149..958703 Francisella tularensis subsp. tularensis FSC198 4200720 YP_667072.1 CDS FTF0948c NC_008245.1 959924 960988 R Similar to Q92QZ5 Putative oxidoreductase protein from Rhizobium meliloti (347 aa). FASTA: opt: 1125 Z-score: 1304.5 E(): 8.2e-65 Smith-Waterman score: 1125; 50.140 identity in 357 aa overlap. putative pseudogene: flanked by pseudogenes ORF ftt0948c; aldo/keto reductase complement(959924..960988) Francisella tularensis subsp. tularensis FSC198 4200035 YP_667073.1 CDS folE NC_008245.1 963351 963971 R involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I complement(963351..963971) Francisella tularensis subsp. tularensis FSC198 4199417 YP_667074.1 CDS rhlE NC_008245.1 964098 965423 D Similar to Q8D6C6 Superfamily II DNA and RNA helicase from Vibrio vulnificus (509 aa). FASTA: opt: 1533 Z-score: 1649.9 E(): 4.8e-84 Smith-Waterman score: 1533; 56.036 identity in 439 aa overlap; ATP-dependent RNA helicase RhlE 964098..965423 Francisella tularensis subsp. tularensis FSC198 4199210 YP_667075.1 CDS FTF0953c NC_008245.1 965420 966961 R Similar to Q9KTB5 Proton/peptide symporter family protein from Vibrio cholerae (514 aa). FASTA: opt: 1329 Z-score: 1443.3 E(): 1.5e-72 Smith-Waterman score: 1329; 42.629identity in 502 aa overlap. ORF ftt0953c; proton-dependent oligopeptide transport (POT) family protein complement(965420..966961) Francisella tularensis subsp. tularensis FSC198 4200038 YP_667076.1 CDS FTF0954c NC_008245.1 967099 967419 R Similar to O29392 Hypothetical protein AF0869 from Archaeoglobus fulgidus (108 aa). FASTA: opt: 272 Z-score: 377.5 E(): 3.9e-13 Smith-Waterman score: 272; 42.056 identity in 107 aa overlap ORF ftt0954c; hypothetical protein complement(967099..967419) Francisella tularensis subsp. tularensis FSC198 4200039 YP_667077.1 CDS gor NC_008245.1 967430 968791 R catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense; glutathione reductase complement(967430..968791) Francisella tularensis subsp. tularensis FSC198 4200292 YP_667078.1 CDS FTF0956c NC_008245.1 968829 969548 R Similar to AAO50751 (Q86L42) Hypothetical protein from Dictyostelium discoideum (239 aa). FASTA: opt: 229 Z-score: 273.3 E(): 2.3e-07 Smith-Waterman score: 253; 29.437 identity in 231 aa overlap ORF ftt0956c; hypothetical protein complement(968829..969548) Francisella tularensis subsp. tularensis FSC198 4200040 YP_667079.1 CDS FTF0957c NC_008245.1 969548 970051 R Similar to Q83YE2 Shy8 from Streptomyces hygroscopicus (163 aa). FASTA: opt: 343 Z-score: 413.4 bits: 82.8 E(): 3.9e-15 Smith-Waterman score: 343; 36.420 identity in 162 aa overlap. ORF ftt0957c; hypothetical protein complement(969548..970051) Francisella tularensis subsp. tularensis FSC198 4200041 YP_667080.1 CDS FTF0958c NC_008245.1 970054 970761 R Similar to Q9HWL9 Probable short-chain dehydrogenase from Pseudomonas aeruginosa (238 aa). FASTA: opt: 848 Z-score: 1032.8 E(): 1.1e-49 Smith-Waterman score: 848; 55.932 identity in 236 aa overlap ORF ftt0958c; short chain dehydrogenase complement(970054..970761) Francisella tularensis subsp. tularensis FSC198 4200042 YP_667081.1 CDS xthA NC_008245.1 970782 971570 R Similar to Q83EM1 Exodeoxyribonuclease III from Coxiella burnetii (259 aa). FASTA: opt: 991 Z-score: 1173.5 E(): 1.6e-57 Smith-Waterman score: 991; 54.789 identity in 261 aa overlap; exodeoxyribonuclease III complement(970782..971570) Francisella tularensis subsp. tularensis FSC198 4200696 YP_667082.1 CDS FTF0960 NC_008245.1 971854 972837 D Simiar to Q8EAC2 Conserved hypothetical protein Shewanella oneidensis (371 aa). FASTA: opt: 607 Z-score: 717.9 E(): 3.9e-32 Smith-Waterman score: 607; 32.622 identity in 328 aa overlap ORF ftt0960; hypothetical protein 971854..972837 Francisella tularensis subsp. tularensis FSC198 4200043 YP_667083.1 CDS mdaB NC_008245.1 972845 973435 D Similar to P40717 Modulator of drug activity B from Escherichia coli (193 aa). FASTA: opt: 900 Z-score: 1129.6 E(): 4.5e-55 Smith-Waterman score: 900; 63.542 identity in 192 aa overlap.; modulator of drug activity B 972845..973435 Francisella tularensis subsp. tularensis FSC198 4199662 YP_667084.1 CDS FTF0962 NC_008245.1 973551 974213 D Similar to Q87Z85 ThiJ/PfpI family protein from Pseudomonas syringae (225 aa). FASTA: opt: 570 Z-score: 665.3 E(): 3.3e-29 Smith-Waterman score: 570; 38.991 identity in 218 aa overlap ORF ftt0962; ThiJ/PfpI family protein 973551..974213 Francisella tularensis subsp. tularensis FSC198 4199323 YP_667085.1 CDS aroG NC_008245.1 974283 975395 R catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase complement(974283..975395) Francisella tularensis subsp. tularensis FSC198 4199437 YP_667086.1 CDS ffh NC_008245.1 975427 976803 R Similar to Q9CLN6 Ffh from Pasteurella multocida (458 aa). FASTA: opt: 1851 Z-score: 1789.9 E(): 7.5e-92 Smith-Waterman score: 1851; 61.790 identity in 458 aa overlap; signal recognition particle protein, Ffh complement(975427..976803) Francisella tularensis subsp. tularensis FSC198 4199410 YP_667087.1 CDS FTF0965c NC_008245.1 977147 978052 R Similar to Q928M9 Hypothetical protein lin2503 from Listeria innocua (279 aa). FASTA: opt: 733 Z-score: 821.7 E(): 6.4e-38 Smith-Waterman score: 733; 41.852 identity in 270 aa overlap. ORF ftt0965c; hypothetical protein complement(977147..978052) Francisella tularensis subsp. tularensis FSC198 4199324 YP_667088.1 CDS infA NC_008245.1 978146 978364 D stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 978146..978364 Francisella tularensis subsp. tularensis FSC198 4199609 YP_667089.1 CDS FTF0968c NC_008245.1 979326 980741 R Similar to Q83BZ0 Amino acid antiporter from Coxiella burnetii (474 aa). FASTA: 432 opt: 1275 Z-score: 1361.2 E(): 6.3e-68 Smith-Waterman score: 1275; 40.171 identity in 468 aa overlap. ORF ftt0968c; amino acid antiporter complement(979326..980741) Francisella tularensis subsp. tularensis FSC198 4199326 YP_667090.1 CDS trkA NC_008245.1 980806 982179 R involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; potassium transporter peripheral membrane protein complement(980806..982179) Francisella tularensis subsp. tularensis FSC198 4199861 YP_667091.1 CDS FTF0970 NC_008245.1 982332 982742 D Similar to Q8PIG4 Hypothetical protein XAC2934 from Xanthomonas axonopodis (152 aa). FASTA: opt: 281 Z-score: 360.3 E(): 3.2e-12 Smith-Waterman score: 281; 33.588 identity in 131 aa overlap ORF ftt0970; hypothetical protein 982332..982742 Francisella tularensis subsp. tularensis FSC198 4199327 YP_667092.1 CDS FTF0971 NC_008245.1 982749 984194 D with SufCD activates cysteine desulfurase SufS; cysteine desulfurase activator complex subunit SufB 982749..984194 Francisella tularensis subsp. tularensis FSC198 4199328 YP_667093.1 CDS FTF0972 NC_008245.1 984233 984982 D Similar to Q8PIG2 ABC transporter ATP-binding protein from Xanthomonas axonopodis (254 aa). FASTA: opt: 1080 Z-score: 1117.5 E(): 2.1e-54 Smith-Waterman score: 1080; 65.041 identity in 246 aa overlap. ORF ftt0972; ABC transporter ATP-binding protein 984233..984982 Francisella tularensis subsp. tularensis FSC198 4199329 YP_667094.1 CDS FTF0973 NC_008245.1 984986 986140 D Similar to Q83BX9 Hypothetical protein CBU1358 Coxiella burnetii (426 aa). FASTA: opt: 433 Z-score: 493.2 E(): 1.3e-19 Smith-Waterman score: 460; 29.282 identity in 362 aa overlap ORF ftt0973; hypothetical protein 984986..986140 Francisella tularensis subsp. tularensis FSC198 4199330 YP_667095.1 CDS FTF0975 NC_008245.1 987109 987798 D Weakly similar to Q83CZ8 Hypothetical protein Coxiella burnetii (227 aa) 76 opt: 235 Z-score: 276.0 bits: 58.3 E(): 1.8e-07 Smith-Waterman score: 235; 25.000 identity in 236 aa overlap. ORF ftt0975; hypothetical protein 987109..987798 Francisella tularensis subsp. tularensis FSC198 4199332 YP_667096.1 CDS trxA2 NC_008245.1 987802 988128 D Similar to P37395 Thioredoxin from Cyanidium caldarium (107 aa) fasta scores; opt: 333 Z-score: 452.0 E(): 2.5e-17 Smith-Waterman score: 333; 45.098identity in 102 aa overlap; thioredoxin 987802..988128 Francisella tularensis subsp. tularensis FSC198 4198970 YP_667097.1 CDS FTF0977c NC_008245.1 988527 988820 R Similar to Q89DD5 Bsl7504 protein from Bradyrhizobium japonicum (99 aa). FASTA: opt: 209 Z-score: 292.0 E(): 2e-08 Smith-Waterman score: 209; 38.462 identity in 91 aa overlap ORF ftt0977c; hypothetical protein complement(988527..988820) Francisella tularensis subsp. tularensis FSC198 4199333 YP_667098.1 CDS FTF0978c NC_008245.1 988824 989429 R ORF ftt0978c; hypothetical protein complement(988824..989429) Francisella tularensis subsp. tularensis FSC198 4199334 YP_667099.1 CDS FTF0979c NC_008245.1 989483 990850 R amino-acid permease, similarity to P39137 Amino-acid permease rocE from Bacillus subtilis (467 aa). FASTA: opt: 1272 Z-score: 1431.9 E(): 6.6e-72 Smith-Waterman score: 1272; 40.919 identity in 457 aa overlap. ORF ftt0979c; amino-acid permease complement(989483..990850) Francisella tularensis subsp. tularensis FSC198 4199335 YP_667100.1 CDS FTF0980 NC_008245.1 991085 992326 D Similar to Q8UKI4 Aminotransferase, class II from Agrobacterium tumefaciens (413 aa). FASTA: opt: 486 Z-score: 559.2 E(): 2.7e-23 Smith-Waterman score: 554; 28.493 identity in 365 aa overlap ORF ftt0980; hypothetical protein 991085..992326 Francisella tularensis subsp. tularensis FSC198 4199336 YP_667101.1 CDS FTF0981 NC_008245.1 992659 993789 D Weak homology to two-component sensory protein. ORF ftt0981; hypothetical protein 992659..993789 Francisella tularensis subsp. tularensis FSC198 4199337 YP_667102.1 CDS FTF0982 NC_008245.1 993882 994025 D ORF ftt0982; hypothetical protein 993882..994025 Francisella tularensis subsp. tularensis FSC198 4199338 YP_667103.1 CDS FTF0983 NC_008245.1 994009 994152 D ORF ftt0983; hypothetical protein 994009..994152 Francisella tularensis subsp. tularensis FSC198 4199339 YP_667104.1 CDS mutT NC_008245.1 994739 995149 R Similar to Q87SF6 Mutator MutT protein from Vibrio parahaemolyticus (132 aa). FASTA: opt: 268 Z-score: 340.9 E(): 3.9e-11 Smith-Waterman score: 268; 29.545identity in 132 aa overlap.; Mutator protein complement(994739..995149) Francisella tularensis subsp. tularensis FSC198 4200115 YP_667105.1 CDS FTF0985 NC_008245.1 995188 995772 D Similar to Q8EBZ9 Conserved hypothetical protein from Shewanella oneidensis (187 aa). FASTA: opt: 386 Z-score: 477.0 E(): 1e-18 Smith-Waterman score: 386; 36.022 identity in 186 aa overlap ORF ftt0985; hypothetical protein 995188..995772 Francisella tularensis subsp. tularensis FSC198 4199340 YP_667106.1 CDS FTF0986 NC_008245.1 995774 996184 D Similar to Q9L3I7 Putative Holliday junction resolvase from Aeromonas hydrophila (140 aa). FASTA: opt: 336 Z-score: 430.0 E(): 4.7e-16 Smith-Waterman score: 336; 36.567 identity in 134 aa overlap Putative Holliday junction resolvase predicted in other proteins ORF ftt0986; hypothetical protein 995774..996184 Francisella tularensis subsp. tularensis FSC198 4199341 YP_667107.1 CDS FTF0987 NC_008245.1 996277 996474 D ORF ftt0987; hypothetical protein 996277..996474 Francisella tularensis subsp. tularensis FSC198 4199342 YP_667108.1 CDS FTF0988 NC_008245.1 996597 996785 D ORF ftt0988; hypothetical protein 996597..996785 Francisella tularensis subsp. tularensis FSC198 4199305 YP_667109.1 CDS FTF0989 NC_008245.1 996879 998774 D Similar to Q9I271 Hypothetical protein PA2044 from Pseudomonas aeruginosa (624 aa). FASTA: opt: 447 Z-score: 484.0 E(): 4.2e-19 Smith-Waterman score: 447; 22.203 identity in 572 aa overlap. ORF ftt0989; hypothetical protein 996879..998774 Francisella tularensis subsp. tularensis FSC198 4199306 YP_667110.1 CDS leuS NC_008245.1 998882 1001323 D leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 998882..1001323 Francisella tularensis subsp. tularensis FSC198 4199514 YP_667111.1 CDS FTF0991 NC_008245.1 1001331 1001906 D ORF ftt0991; lipoprotein 1001331..1001906 Francisella tularensis subsp. tularensis FSC198 4199307 YP_667112.1 CDS FTF0992 NC_008245.1 1001967 1003157 D Similar to Q8A7A2 Putative membrane protein from Bacteroides thetaiotaomicron (391 aa). FASTA: opt: 908 Z-score: 1062.3 E(): 2.6e-51 Smith-Waterman score: 908; 37.637 identity in 364 aa overlap. ORF ftt0992; hypothetical protein 1001967..1003157 Francisella tularensis subsp. tularensis FSC198 4199308 YP_667113.1 CDS dcd NC_008245.1 1003164 1003730 R Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase complement(1003164..1003730) Francisella tularensis subsp. tularensis FSC198 4199527 YP_667114.1 CDS FTF0994c NC_008245.1 1003742 1004602 R Similar to Q8XWU1 Probable MRP protein ATP-binding from Ralstonia solanacearum. (362 aa). FASTA: opt: 1008 Z-score: 1105.3 E(): 1e-53 Smith-Waterman score: 1008; 52.688 identity in 279 aa overlap. ORF ftt0994c; MRP like protein complement(1003742..1004602) Francisella tularensis subsp. tularensis FSC198 4199309 YP_667115.1 CDS FTF0995 NC_008245.1 1004676 1005908 D Similarity to Q8UDH1 MFS permease[proline/betaine] from Agrobacterium tumefaciens (443 aa). FASTA: opt: 727 Z-score: 824.0 E(): 4.8e-38 Smith-Waterman score: 828; 35.507identity in 414 aa overlap ORF ftt0995; major facilitator transporter 1004676..1005908 Francisella tularensis subsp. tularensis FSC198 4199310 YP_667116.1 CDS ybhO NC_008245.1 1007478 1008908 D Similar to P71040 Probable cardiolipin synthetase 2 from Bacillus subtilis (482 aa). FASTA: opt: 835 Z-score: 944.7 E(): 9.1e-45 Smith-Waterman score: 835; 32.525 identity in 495 aa overlap; cardiolipin synthetase 1007478..1008908 Francisella tularensis subsp. tularensis FSC198 4200705 YP_667117.1 CDS FTF0998 NC_008245.1 1009074 1010063 D ORF ftt0998; hypothetical protein 1009074..1010063 Francisella tularensis subsp. tularensis FSC198 4199312 YP_667118.1 CDS cobS NC_008245.1 1010831 1012057 R Similar to Q8FUU8 Cobalamin synthesis protein/P47K family protein from Brucella suis (400 aa). FASTA: opt: 1643 Z-score: 1956.7 E(): 4.3e-101 Smith-Waterman score: 1643; 58.396 identity in 399 aa overlap.; cobalamin (vitamin B12) synthesis protein/P47K family protein complement(1010831..1012057) Francisella tularensis subsp. tularensis FSC198 4200272 YP_667119.1 CDS FTF1001 NC_008245.1 1012199 1012630 D Similar to Q8ZJ15 Putative regulatory protein from Yersinia pestis (169 aa). FASTA: opt: 313 Z-score: 406.8 E(): 9.2e-15 Smith-Waterman score: 313; 36.429 identity in 140 aa overlap. ORF ftt1001; regulatory protein 1012199..1012630 Francisella tularensis subsp. tularensis FSC198 4199314 YP_667120.1 CDS pheT NC_008245.1 1012673 1015045 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta complement(1012673..1015045) Francisella tularensis subsp. tularensis FSC198 4199725 YP_667121.1 CDS pheS NC_008245.1 1015066 1016079 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha complement(1015066..1016079) Francisella tularensis subsp. tularensis FSC198 4199724 YP_667122.1 CDS FTF1004c NC_008245.1 1016165 1017058 R Similar to Q9RX03 Hypothetical protein DR0512 from Deinococcus radiodurans (301 aa). Similar to opt: 577 Z-score: 644.6 E(): 5.1e-28 Smith-Waterman score: 577; 33.094 identity in 278 aa overlap. ORF ftt1004c; hypothetical protein complement(1016165..1017058) Francisella tularensis subsp. tularensis FSC198 4199315 YP_667123.1 CDS yhiP NC_008245.1 1017083 1018558 R Similar to Q8X5Q8 Putative transport protein from Escherichia coli (489 aa). FASTA: opt: 1050 Z-score: 1137.7 E(): 1.8e-55 Smith-Waterman score: 1050; 35.569 identity in 492 aa overlap.; proton-dependent oligopeptide transporter (POT) family protein complement(1017083..1018558) Francisella tularensis subsp. tularensis FSC198 4199106 YP_667124.1 CDS FTF1006 NC_008245.1 1018802 1020010 D ORF ftt1006; hypothetical protein 1018802..1020010 Francisella tularensis subsp. tularensis FSC198 4199316 YP_667125.1 CDS FTF1007c NC_008245.1 1019995 1020717 R ORF ftt1007c; hypothetical protein complement(1019995..1020717) Francisella tularensis subsp. tularensis FSC198 4199317 YP_667126.1 CDS FTF1008c NC_008245.1 1020778 1020942 R ORF ftt1008c; hypothetical protein complement(1020778..1020942) Francisella tularensis subsp. tularensis FSC198 4199318 YP_667127.1 CDS FTF1009 NC_008245.1 1021070 1021606 D ORF ftt1009; hypothetical protein 1021070..1021606 Francisella tularensis subsp. tularensis FSC198 4199319 YP_667128.1 CDS FTF1010 NC_008245.1 1021621 1021824 D Similar to Q81BZ8 Transcriptional regulator,Cro/CI family protein from Bacillus cereus (strain ATCC 14579 / DSM 31) (71 aa). FASTA: opt: 263 Z-score: 391.6 E(): 6.4e-14 Smith-Waterman score: 263; 60.606 identity in 66 aa overlap. ORF ftt1010; helix-turn-helix family protein 1021621..1021824 Francisella tularensis subsp. tularensis FSC198 4199320 YP_667129.1 CDS FTF1011 NC_008245.1 1021936 1022124 D ORF ftt1011; hypothetical protein 1021936..1022124 Francisella tularensis subsp. tularensis FSC198 4199321 YP_667130.1 CDS ruvB NC_008245.1 1023111 1024157 R promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB complement(1023111..1024157) Francisella tularensis subsp. tularensis FSC198 4198966 YP_667131.1 CDS FTF1014c NC_008245.1 1024221 1024946 R Similar to YWFD_BACSU (P39640) Hypothetical oxidoreductase ywfD from Bacillus subtilis (255 aa). FASTA: opt: 410 Z-score: 474.7 E(): 1.5e-18 Smith-Waterman score: 471; 38.710 identity in 248 aa overlap. ORF ftt1014c; short chain dehydrogenase family protein complement(1024221..1024946) Francisella tularensis subsp. tularensis FSC198 4200667 YP_667132.1 CDS FTF1015 NC_008245.1 1025064 1025654 D ORF ftt1015; hypothetical protein 1025064..1025654 Francisella tularensis subsp. tularensis FSC198 4200668 YP_667133.1 CDS FTF1016c NC_008245.1 1025664 1026293 R Similar to Q9JQY7 Putative lipase (GDSL lipase family protein) from Neisseria meningitidis (213 aa). FASTA: opt: 358 Z-score: 439.3 E(): 1.4e-16 Smith-Waterman score: 358; 32.203 identity in 177 aa overlap. ORF ftt1016c; GDSL-like lipase/acylhydrolase family protein complement(1025664..1026293) Francisella tularensis subsp. tularensis FSC198 4200669 YP_667134.1 CDS FTF1017c NC_008245.1 1026315 1026650 R ORF ftt1017c; hypothetical protein complement(1026315..1026650) Francisella tularensis subsp. tularensis FSC198 4200670 YP_667135.1 CDS dxs NC_008245.1 1026666 1028513 R catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase complement(1026666..1028513) Francisella tularensis subsp. tularensis FSC198 4199668 YP_667136.1 CDS guaA NC_008245.1 1028595 1030145 R contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase complement(1028595..1030145) Francisella tularensis subsp. tularensis FSC198 4200365 YP_667137.1 CDS FTF1020c NC_008245.1 1030233 1031780 R Similar to Q83EA0 Amino acid permease family protein from Coxiella burnetii (531 aa). FASTA: opt: 925 Z-score: 996.3 E(): 1.3e-47 Smith-Waterman score: 947; 29.379 identity in 531 aa overlap. ORF ftt1020c; amino acid permease complement(1030233..1031780) Francisella tularensis subsp. tularensis FSC198 4200671 YP_667138.1 CDS truA NC_008245.1 1031833 1032609 R mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A complement(1031833..1032609) Francisella tularensis subsp. tularensis FSC198 4200724 YP_667139.1 CDS FTF1022c NC_008245.1 1032612 1034444 R Similar to Y125_PYRHO (O57865) Hypothetical protein PH0125 from Pyrococcus horikoshii (257 aa) (from 1-260). FASTA: opt: 520 Z-score: 632.1 E(): 2.6e-27 Smith-Waterman score: 520; 35.600 identity in 250 aa overlap AND Q97VT8 Lipase (lipP-2) (EC 3.1.1.3) from Sulfolobus solfataricus (311 aa) (from 300-610). FASTA: opt: 613 Z-score: 743.7 E(): 1.6e-33 Smith-Waterman score: 613; 34.586 identity in 266 aa overlap Possible merged protein due to a missing stop codon between 2 CDSs? ORF ftt1022c; hypothetical protein complement(1032612..1034444) Francisella tularensis subsp. tularensis FSC198 4200672 YP_667140.1 CDS FTF1023c NC_008245.1 1034457 1035050 R Similar to Q8EGL6 Fumarylacetoacetate hydrolase family protein from Shewanella oneidensis (208 aa). FASTA: opt: 599 Z-score: 746.5 E(): 1.1e-33 Smith-Waterman score: 599; 51.913 identity in 183 aa overlap. ORF ftt1023c; fumarylacetoacetate hydrolase family protein complement(1034457..1035050) Francisella tularensis subsp. tularensis FSC198 4200673 YP_667141.1 CDS yhbG NC_008245.1 1035099 1035830 R Similar to Q8ZB44 Probable ABC transporter ATP-binding protein from Yersinia pestis (241 aa). FASTA: opt: 1091 Z-score: 1233.5 E(): 8.2e-61 Smith-Waterman score: 1091; 65.690 identity in 239 aa overlap.; ABC transporter ATP-binding protein complement(1035099..1035830) Francisella tularensis subsp. tularensis FSC198 4199102 YP_667142.1 CDS FTF1025c NC_008245.1 1035904 1036737 R ORF ftt1025c; hypothetical protein complement(1035904..1036737) Francisella tularensis subsp. tularensis FSC198 4200674 YP_667143.1 CDS FTF1026c NC_008245.1 1036724 1037350 R ORF ftt1026c; hypothetical protein complement(1036724..1037350) Francisella tularensis subsp. tularensis FSC198 4200675 YP_667144.1 CDS yrbI NC_008245.1 1037358 1037906 R Similar to AAP18518 Hypothetical protein yrbI from Escherichia coli (188 aa). FASTA: initn: 454 init1: 247 opt: 453 Z-score: 558.6 bits: 110.0 E(): 3.2e-23 Smith-Waterman score: 453; 50.000 identity in 152 aa overlap.; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase complement(1037358..1037906) Francisella tularensis subsp. tularensis FSC198 4199035 YP_667145.1 CDS ppa NC_008245.1 1037997 1038518 R Similar to IPYR_YERPE (Q8ZB98) Inorganic pyrophosphatase from Yersinia pestis (175 aa). FASTA: opt: 762 Z-score: 1001.4 E(): 6.9e-48 Smith-Waterman score: 762; 62.209 identity in 172 aa overlap.; inorganic pyrophosphatase complement(1037997..1038518) Francisella tularensis subsp. tularensis FSC198 4199932 YP_667146.1 CDS dacD NC_008245.1 1038675 1040009 D Similar to Q87VW4 D-alanyl-D-alanine carboxypeptidase from Pseudomonas syringae (pv. tomato) (386 aa). FASTA: opt: 602 Z-score: 704.0 E(): 2.5e-31 Smith-Waterman score: 794; 36.409 identity in 401 aa overlap.; D-alanyl-D-alanine carboxypeptidase 1038675..1040009 Francisella tularensis subsp. tularensis FSC198 4199526 YP_667147.1 CDS FTF1030 NC_008245.1 1040042 1040326 D Similar to YE87_NITEU (Q82UJ7) Hypothetical UPF0250 protein NE1487 from Nitrosomonas europaea (87 aa). FASTA: opt: 235 Z-score: 328.5 E(): 2.1e-10 Smith-Waterman score: 235; 36.471 identity in 85 aa overlap. ORF ftt1030; hypothetical protein 1040042..1040326 Francisella tularensis subsp. tularensis FSC198 4200676 YP_667148.1 CDS lipB NC_008245.1 1040336 1040956 D lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; lipoate-protein ligase B 1040336..1040956 Francisella tularensis subsp. tularensis FSC198 4199555 YP_667149.1 CDS ndh NC_008245.1 1045025 1046287 R Similar to Q8UDU6 NADH dehydrogenase from Agrobacterium tumefaciens (strain C58 / ATCC 33970) (438 aa). FASTA: opt: 826 Z-score: 983.7 E(): 6.7e-47 Smith-Waterman score: 826; 32.854 identity in 417 aa overlap.; NADH dehydrogenase complement(1045025..1046287) Francisella tularensis subsp. tularensis FSC198 4200237 YP_667150.1 CDS rpoD NC_008245.1 1046394 1048127 R Similar to P77890 LprpoD (RNA polymerase sigma factor) from Legionella pneumophila (620 aa). FASTA: opt: 1367 Z-score: 1480.9 E(): 1.4e-74 Smith-Waterman score: 1624; 47.182 identity in 621 aa overlap.; RNA polymerase sigma-70 factor complement(1046394..1048127) Francisella tularensis subsp. tularensis FSC198 4200330 YP_667151.1 CDS dnaG NC_008245.1 1048147 1049964 R Similar to Q8DEG2 DNA primase from Vibrio vulnificus (587 aa). FASTA: opt: 1152 Z-score: 1324.3 E(): 7.2e-66 Smith-Waterman score: 1155; 39.679 identity in 499 aa overlap.; DNA primase complement(1048147..1049964) Francisella tularensis subsp. tularensis FSC198 4199353 YP_667152.1 CDS FTF1037c NC_008245.1 1049985 1050431 R Similar to Q87SL6 Conserved hypothetical protein from Vibrio parahaemolyticus (147 aa). FASTA: opt: 473 Z-score: 548.0 E(): 1.2e-22 Smith-Waterman score: 473; 47.586 identity in 145 aa overlap. ORF ftt1037c; hypothetical protein complement(1049985..1050431) Francisella tularensis subsp. tularensis FSC198 4200678 YP_667153.1 CDS rpsU NC_008245.1 1050492 1050689 R a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 complement(1050492..1050689) Francisella tularensis subsp. tularensis FSC198 4198961 YP_667154.1 CDS dacB1 NC_008245.1 1050945 1052348 D Similar to Q83FD1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase from Coxiella burnetii (477 aa). FASTA: opt: 654 Z-score: 780.3 E(): 1.4e-35 Smith-Waterman score: 654; 29.436 identity in 479 aa overlap.; D-alanyl-D-alanine carboxypeptidase 1050945..1052348 Francisella tularensis subsp. tularensis FSC198 4199524 YP_667155.1 CDS FTF1040 NC_008245.1 1052349 1052960 D Similar to Q8EBG1 Conserved hypothetical protein from Shewanella oneidensis (205 aa). FASTA: opt: 610 Z-score: 776.5 E(): 2.3e-35 Smith-Waterman score: 610; 45.810 identity in 179 aa overlap. ORF ftt1040; lipoprotein 1052349..1052960 Francisella tularensis subsp. tularensis FSC198 4200679 YP_667156.1 CDS FTF1041 NC_008245.1 1052976 1053392 D Similar to Q8ESG1 Hypothetical conserved protein from Oceanobacillus iheyensis (134 aa). FASTA: opt: 215 Z-score: 303.3 E(): 5.3e-09 Smith-Waterman score: 215; 32.773 identity in 119 aa overlap. ORF ftt1041; hypothetical protein 1052976..1053392 Francisella tularensis subsp. tularensis FSC198 4200680 YP_667157.1 CDS FTF1042 NC_008245.1 1053385 1054188 D TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs; C32 tRNA thiolase 1053385..1054188 Francisella tularensis subsp. tularensis FSC198 4200681 YP_667158.1 CDS FTF1043 NC_008245.1 1054202 1055014 D Similar to O32766 Macrophage infectivity potentiator from Legionella hackeliae (249 aa). FASTA: opt: 235 Z-score: 273.3 E(): 2.5e-07 Smith-Waterman score: 343; 27.599 identity in 279 aa overlap. ORF ftt1043; FKBP-type peptidyl-prolyl cis-trans isomerase family protein 1054202..1055014 Francisella tularensis subsp. tularensis FSC198 4200682 YP_667159.1 CDS ispB NC_008245.1 1055032 1056009 R Similar to Q8EB79 Octaprenyl-diphosphate synthase from Shewanella oneidensis (323 aa). FASTA: opt: 1117 Z-score: 1360.2 E(): 7.1e-68 Smith-Waterman score: 1117; 53.704 identity in 324 aa overlap.; octaprenyl-diphosphate synthase complement(1055032..1056009) Francisella tularensis subsp. tularensis FSC198 4199299 YP_667160.1 CDS FTF1045c NC_008245.1 1056099 1056530 R ORF ftt1045c; hypothetical protein complement(1056099..1056530) Francisella tularensis subsp. tularensis FSC198 4200683 YP_667161.1 CDS FTF1046c NC_008245.1 1056611 1057234 R ORF ftt1046c; hypothetical protein complement(1056611..1057234) Francisella tularensis subsp. tularensis FSC198 4200684 YP_667162.1 CDS FTF1047c NC_008245.1 1057906 1058268 R ORF ftt1047c; hypothetical protein complement(1057906..1058268) Francisella tularensis subsp. tularensis FSC198 4200685 YP_667163.1 CDS FTF1048c NC_008245.1 1058320 1058886 R ORF ftt1048c; hypothetical protein complement(1058320..1058886) Francisella tularensis subsp. tularensis FSC198 4200686 YP_667164.1 CDS cysN NC_008245.1 1059932 1061344 R Similar to CYSN_VIBPA (Q87SX9) Sulfate adenylyltransferase subunit 1 from Vibrio parahaemolyticus (476 aa). FASTA: opt: 1823 Z-score: 2170.8 E(): 5e-113 Smith-Waterman score: 1823; 59.488 identity in 469 aa overlap.; sulfate adenylyltransferase complement(1059932..1061344) Francisella tularensis subsp. tularensis FSC198 4199522 YP_667165.1 CDS FTF1051c NC_008245.1 1061783 1061947 R ORF ftt1051c; hypothetical protein complement(1061783..1061947) Francisella tularensis subsp. tularensis FSC198 4199801 YP_667166.1 CDS FTF1052c NC_008245.1 1062407 1062613 R ORF ftt1052c; hypothetical protein complement(1062407..1062613) Francisella tularensis subsp. tularensis FSC198 4199802 YP_667167.1 CDS rimI NC_008245.1 1064341 1064829 R Similar to RIMI_ECOLI (P09453) Ribosomal-protein-alanine acetyltransferase (148 aa). FASTA: opt: 237 Z-score: 305.5 E(): 4e-09 Smith-Waterman score: 237; 36.585 identity in 123 aa overlap.; ribosomal-protein-alanine acetyltransferase complement(1064341..1064829) Francisella tularensis subsp. tularensis FSC198 4199218 YP_667168.1 CDS FTF1055c NC_008245.1 1064807 1065232 R ORF ftt1055c; hypothetical protein complement(1064807..1065232) Francisella tularensis subsp. tularensis FSC198 4199804 YP_667169.1 CDS rluB NC_008245.1 1065232 1066047 R Similar to Q8ZEG0 Ribosomal large subunit pseudouridine synthase B from Yersinia pestis (318 aa). FASTA: opt: 938 Z-score: 1164.9 E(): 5.4e-57 Smith-Waterman score: 938; 56.705identity in 261 aa overlap.; ribosomal large subunit pseudouridine synthase B complement(1065232..1066047) Francisella tularensis subsp. tularensis FSC198 4199221 YP_667170.1 CDS FTF1057c NC_008245.1 1066040 1066945 R Similar to Q9KRM4 Fimbrial biogenesis and twitching motility protein, putative from Vibrio cholerae (237 aa). FASTA: opt: 249 Z-score: 293.4 E(): 1.9e-08 Smith-Waterman score: 249; 25.346 identity in 217 aa overlap. Tetratrico peptide repeat (TPR) containing protein. Shows a weak similarity to the lipoprotein pilF (Pseudomonas) that has an N-terminal type II (lipoprotein) signal sequence,followed by six tandem degenerated 34-amino acid repeats,which are involved in protein-protein interactions. ORF ftt1057c; Type IV pili lipoprotein complement(1066040..1066945) Francisella tularensis subsp. tularensis FSC198 4199805 YP_667171.1 CDS FTF1058c NC_008245.1 1066935 1068047 R Similar to Y2A6_PSEAE (Q51385) Hypothetical protein PA3806 from Pseudomonas aeruginosa (379 aa). FASTA: opt: 1458 Z-score: 1752.5 E(): 1e-89 Smith-Waterman score: 1458; 60.434 identity in 369 aa overlap. ORF ftt1058c; radical SAM superfamily protein complement(1066935..1068047) Francisella tularensis subsp. tularensis FSC198 4199806 YP_667172.1 CDS dnaB NC_008245.1 1068078 1069475 R Similar to DNAB_PASMU (Q9CNL6) Replicative DNA helicase from Pasteurella multocida (467 aa). FASTA: opt: 1484 Z-score: 1719.2 E(): 7.2e-88 Smith-Waterman score: 1484; 51.016 identity in 443 aa overlap.; replicative DNA helicase complement(1068078..1069475) Francisella tularensis subsp. tularensis FSC198 4199351 YP_667173.1 CDS rplI NC_008245.1 1069563 1070018 R in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 complement(1069563..1070018) Francisella tularensis subsp. tularensis FSC198 4200779 YP_667174.1 CDS rpsR NC_008245.1 1070037 1070255 R binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 complement(1070037..1070255) Francisella tularensis subsp. tularensis FSC198 4198956 YP_667175.1 CDS rpsF NC_008245.1 1070271 1070606 R binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 complement(1070271..1070606) Francisella tularensis subsp. tularensis FSC198 4200338 YP_667176.1 CDS hemF NC_008245.1 1071284 1072210 D catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 1071284..1072210 Francisella tularensis subsp. tularensis FSC198 4200375 YP_667177.1 CDS FTF1064 NC_008245.1 1072235 1072825 D Shows weak similarity to histidine acid phosphatase family. ORF ftt1064; hypothetical protein 1072235..1072825 Francisella tularensis subsp. tularensis FSC198 4199807 YP_667178.1 CDS isftu1 NC_008245.1 1073364 1074148 R ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and also mariner elements, show that this transposase shares strongly conserved residues, including a fully conserved dipeptide,Asp-Glu (DE), and a block consisting of a fully conserved Asp and highly conserved Glu, separated by 34 or 35 residues (D35E). The conserved dipeptide is only present if ribosomal frameshifting occurs.; transposase complement(join(1073364..1073822,1073822..1074148)) Francisella tularensis subsp. tularensis FSC198 4199638 YP_667179.1 CDS FTF1066c NC_008245.1 1074317 1074691 R ORF ftt1066c; hypothetical protein complement(1074317..1074691) Francisella tularensis subsp. tularensis FSC198 4199808 YP_667180.1 CDS FTF1068c NC_008245.1 1078007 1078585 R ORF ftt1068c; hypothetical protein complement(1078007..1078585) Francisella tularensis subsp. tularensis FSC198 4199809 YP_667181.1 CDS FTF1069c NC_008245.1 1078674 1079579 R ORF ftt1069c; hypothetical protein complement(1078674..1079579) Francisella tularensis subsp. tularensis FSC198 4199810 YP_667182.1 CDS FTF1071c NC_008245.1 1082848 1083354 R Similar to Q82XK5 Putative antirestriction protein from Nitrosomonas europaea (171 aa). FASTA: opt: 426 Z-score: 519.1 E(): 5e-21 Smith-Waterman score: 426; 42.771 identity in 166 aa overlap. ORF ftt1071c; hypothetical protein complement(1082848..1083354) Francisella tularensis subsp. tularensis FSC198 4199812 YP_667183.1 CDS FTF1072 NC_008245.1 1083998 1084627 D ORF ftt1072; hypothetical protein 1083998..1084627 Francisella tularensis subsp. tularensis FSC198 4199813 YP_667184.1 CDS FTF1073c NC_008245.1 1084783 1085154 R ORF ftt1073c; hypothetical protein complement(1084783..1085154) Francisella tularensis subsp. tularensis FSC198 4199814 YP_667185.1 CDS isftu1 NC_008245.1 1085388 1086172 D ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and also mariner elements, show that this transposase shares strongly conserved residues, including a fully conserved dipeptide,Asp-Glu (DE), and a block consisting of a fully conserved Asp and highly conserved Glu, separated by 34 or 35 residues (D35E). The conserved dipeptide is only present if ribosomal frameshifting occurs.; transposase join(1085388..1085714,1085714..1086172) Francisella tularensis subsp. tularensis FSC198 4199639 YP_667186.1 CDS FTF1075 NC_008245.1 1087056 1087283 D Similar to Y4MF_RHISN (P55565) Hypothetical transcriptional regulator y4mF from Rhizobium sp. (strain NGR234) (76 aa). FASTA: opt: 205 Z-score: 292.4 E(): 2.1e-08 Smith-Waterman score: 205; 47.059identity in 68 aa overlap. ORF ftt1075; transcriptional regulator 1087056..1087283 Francisella tularensis subsp. tularensis FSC198 4199815 YP_667187.1 CDS hipA NC_008245.1 1087268 1088542 D Similar to Q82V03 Possible HipA protein from Nitrosomonas europaea (429 aa). FASTA: opt: 1021 Z-score: 1249.8 E(): 1e-61 Smith-Waterman score: 1021; 41.162 identity in 413 aa overlap.; transcriptional regulator 1087268..1088542 Francisella tularensis subsp. tularensis FSC198 4200194 YP_667188.1 CDS FTF1077c NC_008245.1 1088666 1089052 R Putative pseudogene. Bases 3-128 similar to the same homolog as for next upstream ORF, FRPC_NEIMC (P55127) Iron-regulated protein frpC from Neisseria meningitidis (serogroup C) (1829 aa). FASTA: opt: 118 Z-score: 143.0 bits: 35.9 E(): 4.5 Smith-Waterman score: 120; 26.351 identity in 148 aa overlap (3-128:582-728). ORF ftt1077c; hypothetical protein complement(1088666..1089052) Francisella tularensis subsp. tularensis FSC198 4199816 YP_667189.1 CDS FTF1078c NC_008245.1 1089033 1089845 R Similar to FRPC_NEIMC (P55127) Iron-regulated protein frpC from Neisseria meningitidis (serogroup C) (1829 aa). FASTA: opt: 567 Z-score: 644.8 E(): 5.1e-28 Smith-Waterman score: 567; 53.416identity in 161 aa overlap (103-260:414-574). Putative pseudogene. Bases 103-260 similar to the same homolog as for the next downstream ORF. ORF ftt1078c; hypothetical protein complement(1089033..1089845) Francisella tularensis subsp. tularensis FSC198 4199817 YP_667190.1 CDS FTF1079c NC_008245.1 1089860 1090120 R ORF ftt1079c; hypothetical protein complement(1089860..1090120) Francisella tularensis subsp. tularensis FSC198 4199818 YP_667191.1 CDS FTF1080c NC_008245.1 1090137 1091015 R ORF ftt1080c; hypothetical protein complement(1090137..1091015) Francisella tularensis subsp. tularensis FSC198 4199819 YP_667192.1 CDS FTF1081c NC_008245.1 1091015 1091818 R ORF ftt1081c; hypothetical protein complement(1091015..1091818) Francisella tularensis subsp. tularensis FSC198 4199573 YP_667193.1 CDS FTF1082 NC_008245.1 1092044 1092466 D ORF ftt1082; hypothetical protein 1092044..1092466 Francisella tularensis subsp. tularensis FSC198 4199574 YP_667194.1 CDS FTF1083c NC_008245.1 1092482 1092739 R ORF ftt1083c; hypothetical protein complement(1092482..1092739) Francisella tularensis subsp. tularensis FSC198 4199575 YP_667195.1 CDS rdgC NC_008245.1 1092744 1093604 R Required for efficient pilin antigenic variation; recombination associated protein complement(1092744..1093604) Francisella tularensis subsp. tularensis FSC198 4200598 YP_667196.1 CDS FTF1085 NC_008245.1 1093786 1094784 D Similar to YM90_SHEON (Q8EES8) Hypothetical UPF0176 protein SO229 from Shewanella oneidensis (333 aa). FASTA: initn: 1561 init1: 1472 opt: 1479 Z-score: 1729.8 E(): 1.9e-88 Smith-Waterman score: 1479; 63.636identity in 330 aa overlap. ORF ftt1085; hypothetical protein 1093786..1094784 Francisella tularensis subsp. tularensis FSC198 4199576 YP_667197.1 CDS FTF1086c NC_008245.1 1094915 1095745 R Similar to Q8EFU7 Conserved hypothetical protein from Shewanella oneidensis (279 aa). FASTA: 351 opt: 789 Z-score: 963.7 E(): 8.8e-46 Smith-Waterman score: 789; 45.290 identity in 276 aa overlap. ORF ftt1086c; hypothetical protein complement(1094915..1095745) Francisella tularensis subsp. tularensis FSC198 4199577 YP_667198.1 CDS rep NC_008245.1 1095801 1097816 R Similar to REP_HAEIN (P44804) ATP-dependent DNA helicase rep from Haemophilus influenzae (670 aa). FASTA: opt: 2055 Z-score: 2350.5 E(): 5e-123 Smith-Waterman score: 2055; 47.806 identity in 661 aa overlap.; ATP-dependent DNA helicase complement(1095801..1097816) Francisella tularensis subsp. tularensis FSC198 4200610 YP_667199.1 CDS FTF1088c NC_008245.1 1097810 1098556 R ORF ftt1088c; hypothetical protein complement(1097810..1098556) Francisella tularensis subsp. tularensis FSC198 4199578 YP_667200.1 CDS FTF1089 NC_008245.1 1099164 1099685 D Similar to Q8EW31 Hypothetical protein from Mycoplasma penetrans (194 aa). FASTA: opt: 235 Z-score: 294.7 E(): 1.6e-08 Smith-Waterman score: 235; 31.515 identity in 165 aa overlap. ORF ftt1089; isochorismatase hydrolase family protein 1099164..1099685 Francisella tularensis subsp. tularensis FSC198 4199579 YP_667201.1 CDS FTF1090 NC_008245.1 1099682 1100359 D Similar to Q8A546 Putative membrane transporter involved in nicotinamide mononucleotide transport from Bacteroides thetaiotaomicron (188 aa). FASTA: opt: 285 Z-score: 336.8 E(): 7.2e-11 Smith-Waterman score: 302; 29.592 identity in 196 aa overlap. ORF ftt1090; hypothetical protein 1099682..1100359 Francisella tularensis subsp. tularensis FSC198 4199580 YP_667202.1 CDS FTF1091 NC_008245.1 1100372 1100860 D Similar to Q9AD62 Putative hydrolase (193 aa). FASTA: opt: 251 Z-score: 311.7 E(): 1.8e-09 Smith-Waterman score: 251; 32.075identity in 159 aa overlap. ORF ftt1091; isochorismatase hydrolase family protein 1100372..1100860 Francisella tularensis subsp. tularensis FSC198 4199581 YP_667203.1 CDS FTF1092c NC_008245.1 1101017 1101475 R ORF ftt1092c; hypothetical protein complement(1101017..1101475) Francisella tularensis subsp. tularensis FSC198 4199582 YP_667204.1 CDS talA NC_008245.1 1101498 1102463 R Similar to Q8EBH2 Transaldolase from Shewanella oneidensis (318 aa). FASTA: opt: 1030 Z-score: 1249.3 E(): 1.1e-61 Smith-Waterman score: 1030; 50.938 identity in 320 aa overlap.; transaldolase B complement(1101498..1102463) Francisella tularensis subsp. tularensis FSC198 4199095 YP_667205.1 CDS FTF1094c NC_008245.1 1102597 1104012 R Similar to Q83DX0 Cytosol aminopeptidase family protein from Coxiella burnetii (458 aa). FASTA: opt: 1273 Z-score: 1536.1 E(): 1.1e-77 Smith-Waterman score: 1273; 41.830 identity in 459 aa overlap. ORF ftt1094c; cytosol aminopeptidase complement(1102597..1104012) Francisella tularensis subsp. tularensis FSC198 4199583 YP_667206.1 CDS FTF1095c NC_008245.1 1103979 1105361 R Similar to Q88DA4 Outer membrane efflux protein from Pseudomonas putida (strain KT2440) (477 aa). FASTA: opt: 405 Z-score: 484.1 E(): 4.5e-19 Smith-Waterman score: 405; 22.907 identity in 454 aa overlap. Not a membrane protein. ORF ftt1095c; hypothetical protein complement(1103979..1105361) Francisella tularensis subsp. tularensis FSC198 4199584 YP_667207.1 CDS alaS NC_008245.1 1105369 1107966 R Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase complement(1105369..1107966) Francisella tularensis subsp. tularensis FSC198 4199759 YP_667208.1 CDS FTF1097 NC_008245.1 1108122 1108568 D ORF ftt1097; hypothetical protein 1108122..1108568 Francisella tularensis subsp. tularensis FSC198 4199585 YP_667209.1 CDS FTF1099c NC_008245.1 1110657 1110992 R ORF ftt1099c; hypothetical protein complement(1110657..1110992) Francisella tularensis subsp. tularensis FSC198 4199587 YP_667210.1 CDS FTF1100 NC_008245.1 1111095 1111430 D Similar to Q83DY7 Iojap-related protein from Coxiella burnetii (116 aa). FASTA: opt: 326 Z-score: 425.2 E(): 8.6e-16 Smith-Waterman score: 326; 41.509 identity in 106 aa overlap. ORF ftt1100; hypothetical protein 1111095..1111430 Francisella tularensis subsp. tularensis FSC198 4199588 YP_667211.1 CDS FTF1103 NC_008245.1 1112915 1114012 D Similar to Q8Z9P6 Putative exported protein from Salmonella typhi (281 aa). FASTA: opt: 392 Z-score: 435.6 E(): 2.3e-16 Smith-Waterman score: 392; 33.491 identity in 212 aa overlap. ORF ftt1103; lipoprotein 1112915..1114012 Francisella tularensis subsp. tularensis FSC198 4199590 YP_667212.1 CDS msrA1 NC_008245.1 1115496 1116350 R this fusion consists of methionine sulfoxide B reductase at the N-terminus and A at the C-terminus; A and B are stereospecific enzymes that recognize the damaged produces of oxidative stress, S and R epimers of methionine sulfoxide, respectively; a fusion protein of these enzymes with thioredoxin provides protection against oxidative stress in Neisseria gonorrhoeae; bifunctional methionine sulfoxide reductase B/A protein complement(1115496..1116350) Francisella tularensis subsp. tularensis FSC198 4200100 YP_667213.1 CDS tspO NC_008245.1 1116479 1116955 D Similar to Q8TID9 Benzodiazepine receptor TspO from Methanosarcina acetivorans (160 aa). FASTA: opt: 417 Z-score: 464.9 E(): 5.3e-18 Smith-Waterman score: 417; 40.994 identity in 161 aa overlap.; tryptophan-rich sensory protein 1116479..1116955 Francisella tularensis subsp. tularensis FSC198 4198973 YP_667214.1 CDS FTF1108 NC_008245.1 1119041 1119793 D Similar to Q891T6 23S rRNA methyltransferase (EC 2.1.1.-) from Clostridium tetani (260 aa). FASTA: opt: 442 Z-score: 545.7 E(): 1.7e-22 Smith-Waterman score: 442; 34.091 identity in 264 aa overlap. ORF ftt1108; rRNA methyltransferase 1119041..1119793 Francisella tularensis subsp. tularensis FSC198 4199591 YP_667215.1 CDS FTF1109 NC_008245.1 1119887 1120855 D Similar to Q8U768 Choloylglycine hydrolase family protein from Agrobacterium tumefaciens (strain C58 / ATCC 33970) (355 aa). FASTA: opt: 362 Z-score: 436.7 E(): 2e-16 Smith-Waterman score: 424; 28.956 identity in 297 aa overlap. ORF ftt1109; choloylglycine hydrolase family protein 1119887..1120855 Francisella tularensis subsp. tularensis FSC198 4200211 YP_667216.1 CDS FTF1110 NC_008245.1 1121020 1121373 D ORF ftt1110; hypothetical protein 1121020..1121373 Francisella tularensis subsp. tularensis FSC198 4200212 YP_667217.1 CDS isftu2 NC_008245.1 1121469 1122212 D ISFtu2. Transposase, member of the IS5 family. Identical to Q8GM03 putative transposase from Francisella tularensis (247 aa).; transposase 1121469..1122212 Francisella tularensis subsp. tularensis FSC198 4199292 YP_667218.1 CDS rpoH NC_008245.1 1122260 1123138 R binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 complement(1122260..1123138) Francisella tularensis subsp. tularensis FSC198 4200331 YP_667219.1 CDS FTF1113c NC_008245.1 1123162 1123692 R ORF ftt1113c; hypothetical protein complement(1123162..1123692) Francisella tularensis subsp. tularensis FSC198 4200213 YP_667220.1 CDS secF NC_008245.1 1123724 1124668 R forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF complement(1123724..1124668) Francisella tularensis subsp. tularensis FSC198 4200738 YP_667221.1 CDS secD NC_008245.1 1124687 1126624 R part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD complement(1124687..1126624) Francisella tularensis subsp. tularensis FSC198 4200736 YP_667222.1 CDS yajC NC_008245.1 1126681 1127037 R Similar to Q8XFR4 (Q8XFR4) Putative membrane protein (Preprotein translocase IISP family, membrane subunit) from Salmonella typhi (110 aa). FASTA: opt: 347 Z-score: 458.8 E(): 1.2e-17 Smith-Waterman score: 347; 47.664 identity in 107 aa overlap.; preprotein translocase family protein complement(1126681..1127037) Francisella tularensis subsp. tularensis FSC198 4200699 YP_667223.1 CDS FTF1117c NC_008245.1 1127591 1128163 R Similar to Q9HZE2 Hypothetical protein PA3066 from Pseudomonas aeruginosa (190 aa). FASTA: opt: 359 Z-score: 477.3 E(): 1.1e-18 Smith-Waterman score: 359; 35.638 identity in 188 aa overlap. ORF ftt1117c; isochorismatase hydrolase family protein complement(1127591..1128163) Francisella tularensis subsp. tularensis FSC198 4200214 YP_667224.1 CDS FTF1118c NC_008245.1 1128175 1129050 R Similar to Q9KKY7 Hypothetical protein VCA0963 from Vibrio cholerae (307 aa). FASTA: opt: 340 Z-score: 385.2 E(): 1.5e-13 Smith-Waterman score: 340; 22.603 identity in 292 aa overlap. ORF ftt1118c; hypothetical protein complement(1128175..1129050) Francisella tularensis subsp. tularensis FSC198 4200215 YP_667225.1 CDS FTF1119 NC_008245.1 1129155 1130030 D Similar to Q8D460 Transcriptional regulator from Vibrio vulnificus (296 aa). FASTA: opt: 459 Z-score: 575.9 E(): 3.5e-24 Smith-Waterman score: 459; 29.197 identity in 274 aa overlap. ORF ftt1119; LysR transcriptional regulator family protein 1129155..1130030 Francisella tularensis subsp. tularensis FSC198 4200216 YP_667226.1 CDS tgt NC_008245.1 1130037 1131140 R Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase complement(1130037..1131140) Francisella tularensis subsp. tularensis FSC198 4199138 YP_667227.1 CDS FTF1122c NC_008245.1 1132114 1132584 R ORF ftt1122c; lipoprotein complement(1132114..1132584) Francisella tularensis subsp. tularensis FSC198 4200218 YP_667228.1 CDS ygiH NC_008245.1 1133166 1133780 D Similar to Y647_YERPE (Q8ZI67) Hypothetical UPF0078 protein YPO0647/Y3532 (216 aa). FASTA: opt: 604 Z-score: 713.6 E(): 7.4e-32 Smith-Waterman score: 604; 48.500 identity in 200 aa overlap.; hypothetical protein 1133166..1133780 Francisella tularensis subsp. tularensis FSC198 4199101 YP_667229.1 CDS metN NC_008245.1 1133743 1134819 D Similar to AAP15732 ATP-binding component of a transporter from Shigella flexneri (343 aa). FASTA: opt: 1070 Z-score: 1232.1 E(): 9.7e-61 Smith-Waterman score: 1070; 46.221 identity in 344 aa overlap.; D-methionine transport protein, ABC transporter,ATP-binding subunit 1133743..1134819 Francisella tularensis subsp. tularensis FSC198 4199840 YP_667230.1 CDS metIQ NC_008245.1 1134797 1136269 D Similar to METQ_SALTI (Q8Z992) D-methionine-binding lipoprotein metQ [Precursor] from Salmonella typhi (271 aa). FASTA: opt: 815 Z-score: 926.6 E(): 1e-43 Smith-Waterman score: 815; 51.020identity in 245 aa overlap. The FASTA-hits do not include the first 220 aa. Probably two genes, metI and metQ, in other organisms.; D-methionine binding transport protein, ABC transporter, membrane and periplasmic protein 1134797..1136269 Francisella tularensis subsp. tularensis FSC198 4199838 YP_667231.1 CDS FTF1126 NC_008245.1 1136340 1137551 D Similar to Q83BG9 Tryptophan/tyrosine permease family protein from Coxiella burnetii (426 aa). FASTA: opt: 560 Z-score: 604.8 E(): 8.5e-26 Smith-Waterman score: 560; 27.750identity in 400 aa overlap. ORF ftt1126; aromatic amino acid HAAP transporter 1136340..1137551 Francisella tularensis subsp. tularensis FSC198 4200219 YP_667232.1 CDS FTF1127 NC_008245.1 1137617 1138375 D Similar to Q83F83 Rhodanese domain protein from Coxiella burnetii (124 aa). FASTA: opt: 447 Z-score: 559.4 E(): 2.9e-23 Smith-Waterman score: 447; 51.240 identity in 121 aa overlap. ORF ftt1127; rhodanese-like family protein 1137617..1138375 Francisella tularensis subsp. tularensis FSC198 4200220 YP_667233.1 CDS ispF NC_008245.1 1138388 1138867 D catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 1138388..1138867 Francisella tularensis subsp. tularensis FSC198 4199302 YP_667234.1 CDS FTF1129c NC_008245.1 1138872 1140557 R Similar to CPHA_ANAVA (O86109) Cyanophycin synthetase from Anabaena variabilis (901 aa). FASTA: opt: 2470 Z-score: 2850.7 E(): 6.8e-151 Smith-Waterman score: 2506; 46.787 identity in 887 aa overlap. Probable paralog of cphA since the protein sequences show considerable divergence and gene length differ. ORF ftt1129c; hypothetical protein complement(1138872..1140557) Francisella tularensis subsp. tularensis FSC198 4200221 YP_667235.1 CDS cphA NC_008245.1 1140583 1143405 R catalyze the formation of cyanophycin which may act to store excess nitrogen; cyanophycin synthetase complement(1140583..1143405) Francisella tularensis subsp. tularensis FSC198 4200273 YP_667236.1 CDS glpQ NC_008245.1 1144261 1145013 R Similar to Q83DQ4 Glycerophosphoryl diester phosphodiesterase,putative (250 aa). FASTA: opt: 306 Z-score: 366.0 E(): 1.7e-12 Smith-Waterman score: 306; 28.916identity in 249 aa overlap.; glycerophosphoryl diester phosphodiesterase complement(1144261..1145013) Francisella tularensis subsp. tularensis FSC198 4199797 YP_667237.1 CDS pilB NC_008245.1 1145172 1146950 D Similar to O68431 Pilus assembly protein PilB from Pseudomonas syringae (pv. tomato) (575 aa). FASTA: opt: 1381 Z-score: 1521.6 E(): 7.3e-77 Smith-Waterman score: 1592; 44.597 identity in 583 aa overlap. PilB is required for pili assembly. Homologous to pilT but which has the opposite effect. Homologs exists in other systems.; Type IV pili nucleotide binding protein, ABC transporter ATP-binding protein 1145172..1146950 Francisella tularensis subsp. tularensis FSC198 4199729 YP_667238.1 CDS pilC NC_008245.1 1146965 1148194 D Similar to Q888U1 Type IV pilus biogenesis protein PilC from Pseudomonas syringae (pv. tomato) (405 aa). FASTA: opt: 1017 Z-score: 1153.2 E(): 2.4e-56 Smith-Waterman score: 1017; 39.055identity in 402 aa overlap. Termed pilF in N. gonorrhoeae.; Type IV pili polytopic inner membrane protein 1146965..1148194 Francisella tularensis subsp. tularensis FSC198 4199730 YP_667239.1 CDS FTF1136c NC_008245.1 1149438 1149773 R ORF ftt1136c; hypothetical protein complement(1149438..1149773) Francisella tularensis subsp. tularensis FSC198 4200224 YP_667240.1 CDS FTF1137c NC_008245.1 1149790 1150050 R ORF ftt1137c; hypothetical protein complement(1149790..1150050) Francisella tularensis subsp. tularensis FSC198 4200225 YP_667241.1 CDS hemH NC_008245.1 1150184 1151185 D protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 1150184..1151185 Francisella tularensis subsp. tularensis FSC198 4200376 YP_667242.1 CDS FTF1140 NC_008245.1 1153402 1153599 D ORF ftt1140; hypothetical protein 1153402..1153599 Francisella tularensis subsp. tularensis FSC198 4200226 YP_667243.1 CDS isftu1 NC_008245.1 1153853 1154637 R ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and also mariner elements, show that this transposase shares strongly conserved residues, including a fully conserved dipeptide,Asp-Glu (DE), and a block consisting of a fully conserved Asp and highly conserved Glu, separated by 34 or 35 residues (D35E). The conserved dipeptide is only present if ribosomal frameshifting occurs.; transposase complement(join(1153853..1154311,1154311..1154637)) Francisella tularensis subsp. tularensis FSC198 4199640 YP_667244.1 CDS FTF1143 NC_008245.1 1154974 1155219 D ORF ftt1143; hypothetical protein 1154974..1155219 Francisella tularensis subsp. tularensis FSC198 4200228 YP_667245.1 CDS chaB NC_008245.1 1156275 1156481 D Similar to Q8XGJ2 Cation transport regulator ChaB from Salmonella typhi (76 aa). FASTA: opt: 267 Z-score: 394.9 E(): 4.2e-14 Smith-Waterman score: 267; 54.412 identity in 68 aa overlap.; cation transport regulator 1156275..1156481 Francisella tularensis subsp. tularensis FSC198 4200321 YP_667246.1 CDS dfp NC_008245.1 1157589 1158764 R Similar to DFP_HAEIN (P44953) DNA/pantothenate metabolism flavoprotein homolog from Haemophilus influenzae (400 aa). FASTA: opt: 1012 Z-score: 1206.6 E(): 2.6e-59 Smith-Waterman score: 1012; 43.577identity in 397 aa overlap.; 4'-phosphopantothenoylcysteine decarboxylase complement(1157589..1158764) Francisella tularensis subsp. tularensis FSC198 4199347 YP_667247.1 CDS yjhB NC_008245.1 1158777 1159961 R Similar to YJHB_ECOLI (P39352) Hypothetical metabolite transport protein yjhB from Escherichia coli (405 aa). FASTA: opt: 383 Z-score: 393.4 E(): 5.1e-14 Smith-Waterman score: 383; 26.425 identity in 386 aa overlap.; major facilitator transporter complement(1158777..1159961) Francisella tularensis subsp. tularensis FSC198 4199030 YP_667248.1 CDS FTF1149c NC_008245.1 1160037 1161545 R Similar to Q8XT33 Probable amino-acid permease transmembrane from Ralstonia solanacearum (Pseudomonas solanacearum) (543 aa). FASTA: opt: 960 Z-score: 1077.6 E(): 3.9e-52 Smith-Waterman score: 969; 35.730 identity in 445 aa overlap. ORF ftt1149c; amino acid transporter family protein complement(1160037..1161545) Francisella tularensis subsp. tularensis FSC198 4199460 YP_667249.1 CDS putA NC_008245.1 1161705 1165778 R proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the protein from Pseudomonas does not have this domain; bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase complement(1161705..1165778) Francisella tularensis subsp. tularensis FSC198 4199126 YP_667250.1 CDS FTF1151c NC_008245.1 1165786 1166073 R Similar to Q87LM9 Conserved hypothetical protein from Vibrio parahaemolyticus (86 aa). FASTA: opt: 176 Z-score: 242.1 E(): 1.4e-05 Smith-Waterman score: 176; 32.857 identity in 70 aa overlap. ORF ftt1151c; hypothetical protein complement(1165786..1166073) Francisella tularensis subsp. tularensis FSC198 4199461 YP_667251.1 CDS FTF1152 NC_008245.1 1166287 1166670 D ORF ftt1152; hypothetical protein 1166287..1166670 Francisella tularensis subsp. tularensis FSC198 4199462 YP_667252.1 CDS FTF1153c NC_008245.1 1166737 1166961 R ORF ftt1153c; hypothetical protein complement(1166737..1166961) Francisella tularensis subsp. tularensis FSC198 4199463 YP_667253.1 CDS aroB NC_008245.1 1167019 1168098 R catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase complement(1167019..1168098) Francisella tularensis subsp. tularensis FSC198 4199432 YP_667254.1 CDS aroK NC_008245.1 1168095 1168625 R type I enzyme similar to type II but differentially regulated; major shikimate kinase in fully repressed cells; catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase I complement(1168095..1168625) Francisella tularensis subsp. tularensis FSC198 4199438 YP_667255.1 CDS pilQ NC_008245.1 1168751 1170535 R Similar to Q8EK21 Type IV pilus biogenesis protein PilQ from Shewanella oneidensis (684 aa). FASTA: opt: 1014 Z-score: 1145.2 E(): 6.8e-56 Smith-Waterman score: 1014; 31.658 identity in 597 aa overlap. The nearest gene neighbours show similarity to pilN, pilO and pilP. Also required for type II protein secretion.; Type IV pilin multimeric outer membrane protein complement(1168751..1170535) Francisella tularensis subsp. tularensis FSC198 4199732 YP_667256.1 CDS FTF1157c NC_008245.1 1170548 1171138 R Similar to Q8DCM3 Tfp pilus assembly protein PilP from Vibrio vulnificus (170 aa). FASTA: opt: 176 Z-score: 222.1 E(): 0.00018 Smith-Waterman score: 176; 29.921 identity in 127 aa overlap. Weak similarity to the lipoprotein pilP, which appears to be required for stabilisation of pilQ multimer formation. The nearest gene neighbours show similarity to pilN, pilO and pilQ, which indicates that this protein could be pilP ORF ftt1157c; Type IV pili lipoprotein complement(1170548..1171138) Francisella tularensis subsp. tularensis FSC198 4199464 YP_667257.1 CDS FTF1158c NC_008245.1 1171144 1171740 R Similar to Q8PH76 Fimbrial assembly membrane protein from Xanthomonas axonopodis (pv. citri) (221 aa). FASTA: opt: 144 Z-score: 177.4 E(): 0.055 Smith-Waterman score: 144; 25.946 identity in 185 aa overlap. Weak similarity to type IV pili glycosylation protein (pilO). The nearest gene neighbours show similarity to pilN, pilP and pilQ, which indicates that this protein could be pilO. PilO is required for glycosylation of Pseudomonas aeruginosa pilin. ORF ftt1158c; Type IV pili glycosylation protein complement(1171144..1171740) Francisella tularensis subsp. tularensis FSC198 4199465 YP_667258.1 CDS FTF1159c NC_008245.1 1171734 1172297 R Similar to Q52540 Membrane protein PilN from Pseudomonas syringae (199 aa). FASTA: opt: 143 Z-score: 182.6 E(): 0.028 Smith-Waterman score: 143; 23.704 identity in 135 aa overlap. The nearest gene neighbours show similarity to pilO, pilP and pilQ, which indicates that this protein could be pilN. PilN is also required for type II protein secretion. ORF ftt1159c; Type IV pili associated protein complement(1171734..1172297) Francisella tularensis subsp. tularensis FSC198 4199466 YP_667259.1 CDS FTF1160c NC_008245.1 1172299 1173303 R ORF ftt1160c; hypothetical protein complement(1172299..1173303) Francisella tularensis subsp. tularensis FSC198 4199467 YP_667260.1 CDS adk NC_008245.1 1173430 1174086 D essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 1173430..1174086 Francisella tularensis subsp. tularensis FSC198 4199758 YP_667261.1 CDS FTF1163c NC_008245.1 1177427 1177843 R ORF ftt1163c; hypothetical protein complement(1177427..1177843) Francisella tularensis subsp. tularensis FSC198 4199469 YP_667262.1 CDS era NC_008245.1 1177858 1178751 R Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era complement(1177858..1178751) Francisella tularensis subsp. tularensis FSC198 4199678 YP_667263.1 CDS aspC2 NC_008245.1 1178865 1180058 R Similar to Q83E19 Aspartate aminotransferase from Coxiella burnetii (394 aa). FASTA: opt: 1067 Z-score: 1292.7 E(): 4.1e-64 Smith-Waterman score: 1067; 41.645 identity in 389 aa overlap.; aspartate aminotransferase complement(1178865..1180058) Francisella tularensis subsp. tularensis FSC198 4199690 YP_667264.1 CDS FTF1166c NC_008245.1 1180068 1180874 R Similar to Q8D5X6 Predicted glutamine amidotransferase from Vibrio vulnificus (253 aa). FASTA: opt: 654 Z-score: 813.9 E(): 1.9e-37 Smith-Waterman score: 654; 42.466identity in 219 aa overlap. ORF ftt1166c; glutamine amidotransferases class-II family protein complement(1180068..1180874) Francisella tularensis subsp. tularensis FSC198 4199470 YP_667265.1 CDS FTF1167c NC_008245.1 1180878 1181516 R Similar to Q8EE04 (Q8EE04) Conserved hypothetical protein from Shewanella oneidensis (236 aa). FASTA: opt: 349 Z-score: 425.3 E(): 8.5e-16 Smith-Waterman score: 359; 32.273 identity in 220 aa overlap. ORF ftt1167c; glycoprotease family protein complement(1180878..1181516) Francisella tularensis subsp. tularensis FSC198 4199471 YP_667266.1 CDS nagA NC_008245.1 1181520 1182653 R Similar to Q99VS2 NagA protein (Probable N-acetylglucosamine-6-phosphate deacetylase) from Staphylococcus aureus (393 aa). FASTA: opt: 1006 Z-score: 1213.0 E(): 1.1e-59 Smith-Waterman score: 1006; 43.523 identity in 386 aa overlap.; N-acetylglucosamine-6-phosphate deacetylase complement(1181520..1182653) Francisella tularensis subsp. tularensis FSC198 4200234 YP_667267.1 CDS FTF1169 NC_008245.1 1182716 1183588 D Similar to Q8EE00 GTP-binding protein (313 aa). FASTA: opt: 793 Z-score: 926.5 E(): 1e-43 Smith-Waterman score: 793; 44.218 identity in 294 aa overlap. ORF ftt1169; GTP-binding protein 1182716..1183588 Francisella tularensis subsp. tularensis FSC198 4199472 YP_667268.1 CDS FTF1170 NC_008245.1 1183652 1185400 D ORF ftt1170; lipoprotein 1183652..1185400 Francisella tularensis subsp. tularensis FSC198 4199473 YP_667269.1 CDS hsdM NC_008245.1 1185390 1186856 R Similar to Q8RN13 HsdM from Campylobacter jejuni (494 aa). FASTA: opt: 2001 Z-score: 2374.3 E(): 2.3e-124 Smith-Waterman score: 2001; 59.719 identity in 499 aa overlap.; DNA-methyltransferase, type I restriction-modification enzyme subunit M complement(1185390..1186856) Francisella tularensis subsp. tularensis FSC198 4200202 YP_667270.1 CDS csp NC_008245.1 1186843 1187274 R Similar to Q9HSS3 Cold shock protein from Halobacterium sp. (strain NRC-1 / ATCC 700922 / JCM 11081) (74 aa). FASTA: opt: 170 Z-score: 221.1 E(): 0.0002 Smith-Waterman score: 170; 40.323identity in 62 aa overlap. CDS is longer than FASTA matches. Homology is to first 70 aa of protein only and no matches found for 2nd half of CDS; cold shock protein (DNA-binding) complement(1186843..1187274) Francisella tularensis subsp. tularensis FSC198 4200278 YP_667271.1 CDS FTF1174c NC_008245.1 1188786 1188995 R ORF ftt1174c; hypothetical protein complement(1188786..1188995) Francisella tularensis subsp. tularensis FSC198 4199474 YP_667272.1 CDS FTF1175c NC_008245.1 1189195 1189833 R ORF ftt1175c; hypothetical protein complement(1189195..1189833) Francisella tularensis subsp. tularensis FSC198 4199475 YP_667273.1 CDS FTF1177c NC_008245.1 1192509 1193567 R ORF ftt1177c; hypothetical protein complement(1192509..1193567) Francisella tularensis subsp. tularensis FSC198 4199476 YP_667274.1 CDS FTF1178c NC_008245.1 1193624 1193872 R ORF ftt1178c; hypothetical protein complement(1193624..1193872) Francisella tularensis subsp. tularensis FSC198 4199477 YP_667275.1 CDS bipA NC_008245.1 1194292 1196109 D Similar to Q9KNJ4 GTP-binding protein TypA from Vibrio cholerae (609 aa). FASTA: opt: 2972 Z-score: 3319.9 E(): 5e-177 Smith-Waterman score: 2972; 73.045identity in 601 aa overlap.; GTP binding translational elongation factor Tu and G family protein 1194292..1196109 Francisella tularensis subsp. tularensis FSC198 4200308 YP_667276.1 CDS ggt NC_008245.1 1197052 1198857 R Similar to Q8EFL9 Gamma-glutamyltranspeptidase from Shewanella oneidensis (579 aa). FASTA: opt: 2002 Z-score: 2308.7 E(): 1.1e-120 Smith-Waterman score: 2002; 54.545 identity in 572 aa overlap.; gamma-glutamyltranspeptidase complement(1197052..1198857) Francisella tularensis subsp. tularensis FSC198 4199283 YP_667277.1 CDS FTF1183c NC_008245.1 1199909 1201114 R Similar to YFCK_ECO57 (Q8XCQ7) Hypothetical protein yfcK from Escherichia coli (668 aa). FASTA: opt: 495 Z-score: 572.0 E(): 5.7e-24 Smith-Waterman score: 495; 28.087 identity in 413 aa overlap. ORF ftt1183c; lipoprotein complement(1199909..1201114) Francisella tularensis subsp. tularensis FSC198 4200250 YP_667278.1 CDS FTF1184c NC_008245.1 1201156 1201461 R Similar to Y369_VIBVU (Q8DF55) Hypothetical protein VV10369 from Vibrio vulnificus (117 aa). FASTA: opt: 238 Z-score: 320.2 E(): 6.1e-10 Smith-Waterman score: 238; 41.304 identity in 92 aa overlap. ORF ftt1184c; hypothetical protein complement(1201156..1201461) Francisella tularensis subsp. tularensis FSC198 4200251 YP_667279.1 CDS FTF1185c NC_008245.1 1201461 1201892 R Similar to Q8ZH13 Hypothetical protein YPO1102 from Yersinia pestis (144 aa). FASTA: opt: 463 Z-score: 623.4 E(): 7.9e-27 Smith-Waterman score: 463; 43.662 39dentity in 142 aa overlap. ORF ftt1185c; hypothetical protein complement(1201461..1201892) Francisella tularensis subsp. tularensis FSC198 4200252 YP_667280.1 CDS smpB NC_008245.1 1201967 1202440 D binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 1201967..1202440 Francisella tularensis subsp. tularensis FSC198 4199076 YP_667281.1 CDS FTF1187 NC_008245.1 1202441 1203196 D TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs; C32 tRNA thiolase 1202441..1203196 Francisella tularensis subsp. tularensis FSC198 4200253 YP_667282.1 CDS FTF1188 NC_008245.1 1203468 1204103 D ORF ftt1188; hypothetical protein 1203468..1204103 Francisella tularensis subsp. tularensis FSC198 4200254 YP_667283.1 CDS xseA NC_008245.1 1205899 1207284 R bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit complement(1205899..1207284) Francisella tularensis subsp. tularensis FSC198 4200695 YP_667284.1 CDS FTF1191 NC_008245.1 1207437 1208597 D Similar to Q8RFU4 N-acyl-L-amino acid amidohydrolase from Fusobacterium nucleatum (subsp. nucleatum) (393 aa). FASTA: opt: 945 Z-score: 1170.3 E(): 2.7e-57 Smith-Waterman score: 945; 38.259 identity in 379 aa overlap. ORF ftt1191; aminoacylase 1207437..1208597 Francisella tularensis subsp. tularensis FSC198 4200256 YP_667285.1 CDS FTF1193c NC_008245.1 1209880 1210398 R Similar to Q8ZBY8 Hypothetical protein YPO3242 (Putative amidotransferase) from Yersinia pestis (257 aa). FASTA: opt: 251 Z-score: 317.2 E(): 8.9e-10 Smith-Waterman score: 251; 26.609 identity in 233 aa overlap. ORF ftt1193c; hypothetical protein complement(1209880..1210398) Francisella tularensis subsp. tularensis FSC198 4200258 YP_667286.1 CDS FTF1194c NC_008245.1 1210415 1211341 R Similar to Q884M8 Conserved hypothetical protein from Pseudomonas syringae (pv. tomato) (319 aa). FASTA: opt: 460 Z-score: 588.5 E(): 6.9e-25 Smith-Waterman score: 460; 30.435identity in 322 aa overlap. Putative pseudogene (upstream sequence matches homologs). ORF ftt1194c; lipoprotein complement(1210415..1211341) Francisella tularensis subsp. tularensis FSC198 4200259 YP_667287.1 CDS FTF1196c NC_008245.1 1213016 1214299 R Similar to Q9ZC87 Proline/betaine transporter (PROP7) from Rickettsia prowazekii (423 aa). FASTA: opt: 746 Z-score: 810.0 E(): 3.2e-37 Smith-Waterman score: 746; 31.450identity in 407 aa overlap. ORF ftt1196c; major facilitator transporter complement(1213016..1214299) Francisella tularensis subsp. tularensis FSC198 4200261 YP_667288.1 CDS murI NC_008245.1 1214384 1215181 R Similar to MURI_NEIMC (Q9RMM3) Glutamate racemase (EC 5.1.1.3) from Neisseria meningitidis (serogroup C) (270 aa). FASTA: opt: 826 Z-score: 958.8 E(): 1.6e-45 Smith-Waterman score: 826; 48.473identity in 262 aa overlap.; glutamate racemase complement(1214384..1215181) Francisella tularensis subsp. tularensis FSC198 4200111 YP_667289.1 CDS FTF1198c NC_008245.1 1215181 1216011 R ORF ftt1198c; hypothetical protein complement(1215181..1216011) Francisella tularensis subsp. tularensis FSC198 4200262 YP_667290.1 CDS uvrB NC_008245.1 1216015 1218021 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B complement(1216015..1218021) Francisella tularensis subsp. tularensis FSC198 4200134 YP_667291.1 CDS sbcB NC_008245.1 1218023 1219471 R Similar to Q83BX4 Exodeoxyribonuclease I,putative from Coxiella burnetii (458 aa). FASTA: opt: 677 Z-score: 797.9 E(): 1.5e-36 Smith-Waterman score: 1190; 39.875 identity in 479 aa overlap.; exodeoxyribonuclease I complement(1218023..1219471) Francisella tularensis subsp. tularensis FSC198 4198968 YP_667292.1 CDS FTF1201c NC_008245.1 1219605 1220327 R Similar to Q9KKP5 Oxidoreductase,short-chain dehydrogenase/reductase family from Vibrio cholerae (239 aa). FASTA: opt: 1097 Z-score: 1344.5 E(): 5.4e-67 Smith-Waterman score: 1097; 72.458identity in 236 aa overlap. ORF ftt1201c; oxidoreductase, short-chain dehydrogenase family protein complement(1219605..1220327) Francisella tularensis subsp. tularensis FSC198 4200263 YP_667293.1 CDS FTF1202 NC_008245.1 1220443 1221342 D Similar to Q9KKP4 Transcriptional regulator, LysR family from Vibrio cholerae (301 aa). FASTA: opt: 661 Z-score: 794.3 E(): 2.4e-36 Smith-Waterman score: 661; 36.120identity in 299 aa overlap. ORF ftt1202; LysR family transcriptional regulator 1220443..1221342 Francisella tularensis subsp. tularensis FSC198 4200264 YP_667294.1 CDS FTF1203c NC_008245.1 1221353 1222258 R ORF ftt1203c; hypothetical protein complement(1221353..1222258) Francisella tularensis subsp. tularensis FSC198 4200265 YP_667295.1 CDS FTF1204c NC_008245.1 1222245 1223327 R ORF ftt1204c; hypothetical protein complement(1222245..1223327) Francisella tularensis subsp. tularensis FSC198 4200266 YP_667296.1 CDS gidA NC_008245.1 1223470 1225353 D GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 1223470..1225353 Francisella tularensis subsp. tularensis FSC198 4199284 YP_667297.1 CDS FTF1206 NC_008245.1 1225365 1225757 D ORF ftt1206; hypothetical protein 1225365..1225757 Francisella tularensis subsp. tularensis FSC198 4200477 YP_667298.1 CDS FTF1207 NC_008245.1 1225771 1227141 D ORF ftt1207; hypothetical protein 1225771..1227141 Francisella tularensis subsp. tularensis FSC198 4200478 YP_667299.1 CDS rpiA NC_008245.1 1227143 1227817 D Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 1227143..1227817 Francisella tularensis subsp. tularensis FSC198 4200772 YP_667300.1 CDS isftu1 NC_008245.1 1229891 1230675 R ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and also mariner elements, show that this transposase shares strongly conserved residues, including a fully conserved dipeptide,Asp-Glu (DE), and a block consisting of a fully conserved Asp and highly conserved Glu, separated by 34 or 35 residues (D35E). The conserved dipeptide is only present if ribosomal frameshifting occurs.; transposase complement(join(1229891..1230349,1230349..1230675)) Francisella tularensis subsp. tularensis FSC198 4199641 YP_667301.1 CDS FTF1211c NC_008245.1 1230737 1231129 R CDS is disrupted by the insertion of an ISFtu1 element occurring very near the C-terminal end. It is not clear whether this insertion affects the function of the protein ORF ftt1211c; hypothetical protein complement(1230737..1231129) Francisella tularensis subsp. tularensis FSC198 4200480 YP_667302.1 CDS gloA NC_008245.1 1231129 1231512 R Similar to LGUL_VIBPA (P46235) Probable lactoylglutathione lyase from Vibrio parahaemolyticus (138 aa). FASTA: opt: 549 Z-score: 759.1 E(): 2.2e-34 Smith-Waterman score: 549; 64.516 identity in 124 aa overlap.; lactoylglutathione lyase complement(1231129..1231512) Francisella tularensis subsp. tularensis FSC198 4199791 YP_667303.1 CDS FTF1213 NC_008245.1 1231628 1232341 D Similar to YPDP_BACSU (P54163) Hypothetical protein ypdP from Bacillus subtilis (229 aa). FASTA: opt: 472 Z-score: 563.3 E(): 1.7e-23 Smith-Waterman score: 472; 40.435 identity in 230 aa overlap. ORF ftt1213; YhhQ family protein 1231628..1232341 Francisella tularensis subsp. tularensis FSC198 4200481 YP_667304.1 CDS FTF1214c NC_008245.1 1232595 1233386 R Similar to Q8XN14 Hypothetical protein CPE0524 from Clostridium perfringens (264 aa). FASTA: opt: 486 Z-score: 584.5 E(): 1.1e-24 Smith-Waterman score: 486; 31.939 identity in 263 aa overlap. ORF ftt1214c; haloacid dehalogenase-like hydrolase family protein complement(1232595..1233386) Francisella tularensis subsp. tularensis FSC198 4200482 YP_667305.1 CDS queA NC_008245.1 1234021 1235043 R Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase complement(1234021..1235043) Francisella tularensis subsp. tularensis FSC198 4200594 YP_667306.1 CDS FTF1216c NC_008245.1 1235063 1235524 R ORF ftt1216c; hypothetical protein complement(1235063..1235524) Francisella tularensis subsp. tularensis FSC198 4200483 YP_667307.1 CDS visC NC_008245.1 1235546 1236781 R Similar to Q83F72 VisC protein from Coxiella burnetii (411 aa). FASTA: opt: 645 Z-score: 778.5 E(): 1.8e-35 Smith-Waterman score: 858; 37.192 identity in 406 aa overlap.; monooxygenase family protein complement(1235546..1236781) Francisella tularensis subsp. tularensis FSC198 4200140 YP_667308.1 CDS ubiH NC_008245.1 1236771 1237982 R Similar to Q87UH4 2-octaprenyl-6-methoxyphenyl hydroxylase from Pseudomonas syringae (pv. tomato) (395 aa). FASTA: opt: 654 Z-score: 770.5 E(): 5e-35 Smith-Waterman score: 654; 32.143 identity in 392 aa overlap.; 2-octaprenyl-6-methoxyphenyl hydroxylase complement(1236771..1237982) Francisella tularensis subsp. tularensis FSC198 4198980 YP_667309.1 CDS FTF1219c NC_008245.1 1237991 1238527 R Similar to YGA1_PSEPK (Q88CI0) Hypothetical UPF0149 protein PP5201 from Pseudomonas putida (strain KT2440) (184 aa). FASTA: opt: 269 Z-score: 349.3 E(): 1.4e-11 Smith-Waterman score: 269; 34.637identity in 179 aa overlap. ORF ftt1219c; hypothetical protein complement(1237991..1238527) Francisella tularensis subsp. tularensis FSC198 4200484 YP_667310.1 CDS FTF1220 NC_008245.1 1238928 1239476 D Similar to Q8ZM70 Putative ligase from Salmonella typhimurium (182 aa). FASTA: opt: 317 Z-score: 411.1 E(): 5.2e-15 Smith-Waterman score: 317; 32.727 identity in 165 aa overlap. ORF ftt1220; 5-formyltetrahydrofolate cyclo-ligase 1238928..1239476 Francisella tularensis subsp. tularensis FSC198 4200485 YP_667311.1 CDS FTF1221 NC_008245.1 1239479 1239745 D ORF ftt1221; hypothetical protein 1239479..1239745 Francisella tularensis subsp. tularensis FSC198 4200486 YP_667312.1 CDS dedA2 NC_008245.1 1239752 1240378 D Similar to Q89YU2 Conserved hypothetical protein,putative membrane protein from Bacteroides thetaiotaomicron (213 aa). FASTA: opt: 602 Z-score: 702.4 E(): 3.1e-31 Smith-Waterman score: 602; 42.857identity in 210 aa overlap.; DedA family protein 1239752..1240378 Francisella tularensis subsp. tularensis FSC198 4199533 YP_667313.1 CDS dedA1 NC_008245.1 1240434 1241081 D Similar to Q8R8Y8 Hypothetical protein DedA2 from Thermoanaerobacter tengcongensis (209 aa). FAST: opt: 674 Z-score: 828.7 E(): 2.9e-38 Smith-Waterman score: 674; 45.894 identity in 207 aa overlap.; DedA family protein 1240434..1241081 Francisella tularensis subsp. tularensis FSC198 4199532 YP_667314.1 CDS recO NC_008245.1 1241157 1241855 R Similar to RECO_VIBVU (Q8DC74) DNA repair protein recO from Vibrio vulnificus (243 aa). FASTA: opt: 244 Z-score: 288.3 E(): 3.6e-08 Smith-Waterman score: 244; 29.130 identity in 230 aa overlap.; DNA repair protein recO complement(1241157..1241855) Francisella tularensis subsp. tularensis FSC198 4200606 YP_667315.1 CDS FTF1225c NC_008245.1 1241839 1242168 R ORF ftt1225c; hypothetical protein complement(1241839..1242168) Francisella tularensis subsp. tularensis FSC198 4200487 YP_667316.1 CDS iscS NC_008245.1 1242161 1243336 R Similar to ISCS_VIBCH (Q9KTY2) Cysteine desulfurase (EC 4.4.1.-) from Vibrio cholerae (404 aa). FASTA: opt: 1104 Z-score: 1336.0 E(): 1.6e-66 Smith-Waterman score: 1104; 45.812 identity in 382 aa overlap.; cysteine desulfarase complement(1242161..1243336) Francisella tularensis subsp. tularensis FSC198 4199613 YP_667317.1 CDS rne NC_008245.1 1243586 1246243 D Similar to Q9KQG8 Ribonuclease E from Vibrio cholerae (1052 aa). FASTA: opt: 1928 Z-score: 1743.2 E(): 3.3e-89 Smith-Waterman score: 1943; 43.377 identity in 770 aa overlap.; ribonuclease E 1243586..1246243 Francisella tularensis subsp. tularensis FSC198 4199227 YP_667318.1 CDS lgt NC_008245.1 1246258 1247064 D transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 1246258..1247064 Francisella tularensis subsp. tularensis FSC198 4199515 YP_667319.1 CDS thyA NC_008245.1 1247049 1247873 D ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase 1247049..1247873 Francisella tularensis subsp. tularensis FSC198 4199144 YP_667320.1 CDS serA NC_008245.1 1247876 1249120 D catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 1247876..1249120 Francisella tularensis subsp. tularensis FSC198 4200741 YP_667321.1 CDS mesJ NC_008245.1 1249121 1250317 D Similar to Q83BJ9 MesJ protein from Coxiella burnetii (449 aa). FASTA: opt: 639 Z-score: 733.1 E(): 6.1e-33 Smith-Waterman score: 726; 31.387identity in 411 aa overlap. Thought to be a cell cycle protein; PP-loop family protein 1249121..1250317 Francisella tularensis subsp. tularensis FSC198 4199665 YP_667322.1 CDS isftu1 NC_008245.1 1250462 1251246 D ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and also mariner elements, show that this transposase shares strongly conserved residues, including a fully conserved dipeptide,Asp-Glu (DE), and a block consisting of a fully conserved Asp and highly conserved Glu, separated by 34 or 35 residues (D35E). The conserved dipeptide is only present if ribosomal frameshifting occurs.; transposase join(1250462..1250788,1250788..1251246) Francisella tularensis subsp. tularensis FSC198 4199642 YP_667323.1 CDS yjdL NC_008245.1 1251320 1252648 R Similar to YJDL_ECOLI (P39276) Hypothetical transporter yjdL from Escherichia coli (485 aa).FASTA: opt: 1064 Z-score: 1135.9 E(): 2.2e-55 Smith-Waterman score: 1064; 38.222 identity in 450 aa overlap.This CDS is disrupted by the insertion of an ISFtu1 element occurring very near the C-terminal end. It is not clear whether this insertion affects the function of the protein; proton-dependent oligopeptide transport (POT) family protein complement(1251320..1252648) Francisella tularensis subsp. tularensis FSC198 4199111 YP_667324.1 CDS FTF1234 NC_008245.1 1252899 1254044 D Similar to Q8YIA2 Choloylglycine hydrolase (EC 3.5.1.24) from Brucella melitensis (367 aa). FASTA: opt: 387 Z-score: 460.1 E(): 9.7e-18 Smith-Waterman score: 574; 34.718 identity in 337 aa overlap. ORF ftt1234; choloylglycine hydrolase family protein 1252899..1254044 Francisella tularensis subsp. tularensis FSC198 4200488 YP_667325.1 CDS lpcC NC_008245.1 1254045 1255109 R Similar to Q8FZH8 Lipopolysaccharide core biosynthesis mannosyltransferase LpcC from Brucella suis (354 aa). FASTA: opt: 825 Z-score: 1005.6 E(): 4e-48 Smith-Waterman score: 825; 38.352 identity in 352 aa overlap.; glycosyl transferases group 1 family protein complement(1254045..1255109) Francisella tularensis subsp. tularensis FSC198 4199564 YP_667326.1 CDS FTF1236 NC_008245.1 1255279 1256367 D ORF ftt1236; hypothetical protein 1255279..1256367 Francisella tularensis subsp. tularensis FSC198 4200489 YP_667327.1 CDS FTF1237 NC_008245.1 1256375 1257265 D Similar to Q8A3T1 Putative stress protein from Bacteroides thetaiotaomicron (309 aa). FASTA: opt: 308 Z-score: 375.2 E(): 5.2e-13 Smith-Waterman score: 348; 26.599 identity in 297 aa overlap. ORF ftt1237; glycosyl transferase family protein 1256375..1257265 Francisella tularensis subsp. tularensis FSC198 4200490 YP_667328.1 CDS FTF1238c NC_008245.1 1257291 1258622 R ORF ftt1238c; hypothetical protein complement(1257291..1258622) Francisella tularensis subsp. tularensis FSC198 4200491 YP_667329.1 CDS FTF1239 NC_008245.1 1258830 1260101 D ORF ftt1239; hypothetical protein 1258830..1260101 Francisella tularensis subsp. tularensis FSC198 4200492 YP_667330.1 CDS FTF1240c NC_008245.1 1260116 1260664 R Similar to YJGA_HAEIN (P45076) Hypothetical protein HI1151 from Haemophilus influenzae (178 aa). FASTA: opt: 359 Z-score: 390.6 E(): 7.3e-14 Smith-Waterman score: 359; 35.928 identity in 167 aa overlap. ORF ftt1240c; hypothetical protein complement(1260116..1260664) Francisella tularensis subsp. tularensis FSC198 4200493 YP_667331.1 CDS glyA NC_008245.1 1260768 1262021 D catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 1260768..1262021 Francisella tularensis subsp. tularensis FSC198 4200288 YP_667332.1 CDS FTF1242 NC_008245.1 1262303 1263565 D ORF ftt1242; hypothetical protein 1262303..1263565 Francisella tularensis subsp. tularensis FSC198 4200494 YP_667333.1 CDS mreA NC_008245.1 1263447 1265300 R Similar to EAA32028 Hypothetical protein from Neurospora crassa (567 aa). FASTA: opt: 643 Z-score: 759.7 E(): 2e-34 Smith-Waterman score: 793; 29.879 identity in 579 aa overlap.; FAD binding family protein complement(1263447..1265300) Francisella tularensis subsp. tularensis FSC198 4199854 YP_667334.1 CDS yfiO NC_008245.1 1265377 1266201 R Similar to Q8XYX9 Probable transmembrane protein from Ralstonia solanacearum (Pseudomonas solanacearum) (289 aa). FASTA: opt: 563 Z-score: 689.8 E(): 1.6e-30 Smith-Waterman score: 563; 32.558 identity in 258 aa overlap.; lipoprotein complement(1265377..1266201) Francisella tularensis subsp. tularensis FSC198 4199100 YP_667335.1 CDS rluD NC_008245.1 1266290 1267288 D Similar to Q87S65 Ribosomal large subunit pseudouridine from Vibrio parahaemolyticus (325 aa). FASTA: opt: 917 Z-score: 1118.2 E(): 2.2e-54 Smith-Waterman score: 917; 47.468 identity in 316 aa overlap.; ribosomal large subunit pseudouridine synthase D 1266290..1267288 Francisella tularensis subsp. tularensis FSC198 4199223 YP_667336.1 CDS FTF1246 NC_008245.1 1267230 1268078 D Similar to Q8EEM6 Bax protein, putative from Shewanella oneidensis (255 aa). FASTA: opt: 369 Z-score: 448.5 E(): 4.3e-17 Smith-Waterman score: 369; 31.081 identity in 222 aa overlap. ORF ftt1246; hypothetical protein 1267230..1268078 Francisella tularensis subsp. tularensis FSC198 4200495 YP_667337.1 CDS FTF1247 NC_008245.1 1268153 1269253 D Similar to Q9A5X9 ABC transporter,permease protein,putative from Caulobacter crescentus.(371 aa). FASTA: opt: 755 Z-score: 860.3 E(): 5e-40 Smith-Waterman score: 755; 36.095 identity in 338 aa overlap. ORF ftt1247; ABC transporter membrane protein 1268153..1269253 Francisella tularensis subsp. tularensis FSC198 4200496 YP_667338.1 CDS FTF1248 NC_008245.1 1269268 1270029 D Similar to Q83DK2 ABC transporter,ATP-binding protein from Coxiella burnetii (268 aa). FASTA: opt: 674 Z-score: 783.9 E(): 9e-36 Smith-Waterman score: 674; 46.188 identity in 223 aa overlap. ORF ftt1248; ABC transporter ATP-binding protein 1269268..1270029 Francisella tularensis subsp. tularensis FSC198 4200497 YP_667339.1 CDS FTF1249 NC_008245.1 1270039 1270764 D Similar to Q9HZ27 Hypothetical protein PA3213 from Pseudomonas aeruginosa (312 aa). FASTA: opt: 282 Z-score: 315.9 E(): 1.1e-09 Smith-Waterman score: 282; 23.661 identity in 224 aa overlap. The archetype (Rv0169) for mce related family proteins, was isolated as being necessary for colonization of, and survival within, the macrophage MEDLINE:93377076. ORF ftt1249; cell entry (mce) related family protein 1270039..1270764 Francisella tularensis subsp. tularensis FSC198 4200498 YP_667340.1 CDS FTF1250 NC_008245.1 1270769 1271467 D ORF ftt1250; hypothetical protein 1270769..1271467 Francisella tularensis subsp. tularensis FSC198 4200499 YP_667341.1 CDS FTF1251c NC_008245.1 1271457 1272143 R Similar to Q8EDF8 Conserved hypothetical protein from Shewanella oneidensis (234 aa). FASTA: opt: 692 Z-score: 805.5 E(): 5.6e-37 Smith-Waterman score: 692; 44.828 identity in 232 aa overlap. ORF ftt1251c; hypothetical protein complement(1271457..1272143) Francisella tularensis subsp. tularensis FSC198 4200500 YP_667342.1 CDS FTF1252 NC_008245.1 1272214 1272942 D in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 1272214..1272942 Francisella tularensis subsp. tularensis FSC198 4200501 YP_667343.1 CDS FTF1253 NC_008245.1 1273172 1274659 D Similar to Q9KTB5 Proton/peptide symporter family protein from Vibrio cholerae (514 aa). FASTA: opt: 1234 Z-score: 1376.6 E(): 8.7e-69 Smith-Waterman score: 1245; 42.050identity in 478 aa overlap. ORF ftt1253; proton-dependent oligopeptide transport (POT) family protein 1273172..1274659 Francisella tularensis subsp. tularensis FSC198 4200502 YP_667344.1 CDS fadD1 NC_008245.1 1274767 1276458 D Similar to Q89UU0 Long-chain-fatty-acid-CoA ligase from Bradyrhizobium japonicum (561 aa). FASTA: opt: 1308 Z-score: 1621.3 E(): 2.1e-82 Smith-Waterman score: 1308; 38.324 identity in 561 aa overlap.; Acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase) 1274767..1276458 Francisella tularensis subsp. tularensis FSC198 4199402 YP_667345.1 CDS FTF1255c NC_008245.1 1276446 1277294 R Similar to Q8PAT1 Transcriptional regulator from Xanthomonas campestris (pv. campestris) (287 aa). FASTA: opt: 689 Z-score: 866.5 E(): 2.3e-40 Smith-Waterman score: 689; 37.354identity in 257 aa overlap. ORF ftt1255c; transcriptional regulator araC family protein complement(1276446..1277294) Francisella tularensis subsp. tularensis FSC198 4200503 YP_667346.1 CDS emrB NC_008245.1 1277438 1278967 D Similar to Q83DE1 Drug resistance transporter,EmrB/QacA family from Coxiella burnetii (526 aa). FASTA: opt: 1037 Z-score: 1145.4 E(): 6.6e-56 Smith-Waterman score: 1037; 31.928 identity in 498 aa overlap.; major facilitator transporter 1277438..1278967 Francisella tularensis subsp. tularensis FSC198 4199674 YP_667347.1 CDS emrA1 NC_008245.1 1278989 1280011 D Similar to Q83DE0 Multidrug resistance protein from Coxiella burnetii (331 aa). FASTA: opt: 742 Z-score: 834.3 E(): 1.4e-38 Smith-Waterman score: 742; 37.695 identity in 321 aa overlap.; HlyD family secretion protein 1278989..1280011 Francisella tularensis subsp. tularensis FSC198 4199672 YP_667348.1 CDS FTF1258 NC_008245.1 1280021 1281493 D Similar to Q93NK3 Putative outer membrane protein from Pseudomonas syringae (pv. syringae) (475 aa). FASTA: opt: 594 Z-score: 697.2 E(): 6e-31 Smith-Waterman score: 594; 28.970 identity in 466 aa overlap. ORF ftt1258; outer membrane efflux protein 1280021..1281493 Francisella tularensis subsp. tularensis FSC198 4200504 YP_667349.1 CDS nadE NC_008245.1 1281622 1282371 D Similar to NADE_MYCPN (P75216) Probable NH(3)-dependent NAD(+) synthetase Mycoplasma pneumoniae (248 aa). FASTA: opt: 601 Z-score: 760.1 E(): 1.9e-34 Smith-Waterman score: 601; 40.928identity in 237 aa overlap.; NH(3)-dependent NAD(+) synthetase 1281622..1282371 Francisella tularensis subsp. tularensis FSC198 4200232 YP_667350.1 CDS FTF1260 NC_008245.1 1282475 1282897 D ORF ftt1260; hypothetical protein 1282475..1282897 Francisella tularensis subsp. tularensis FSC198 4200505 YP_667351.1 CDS isftu1 NC_008245.1 1283806 1284590 D ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and also mariner elements, show that this transposase shares strongly conserved residues, including a fully conserved dipeptide,Asp-Glu (DE), and a block consisting of a fully conserved Asp and highly conserved Glu, separated by 34 or 35 residues (D35E). The conserved dipeptide is only present if ribosomal frameshifting occurs.; transposase join(1283806..1284132,1284132..1284590) Francisella tularensis subsp. tularensis FSC198 4199643 YP_667352.1 CDS FTF1263c NC_008245.1 1284882 1285877 R Duplicate of FTF0354 and FTF0378. ORF ftt1263c; hypothetical protein complement(1284882..1285877) Francisella tularensis subsp. tularensis FSC198 4200507 YP_667353.1 CDS isftu1 NC_008245.1 1286806 1287590 R ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and also mariner elements, show that this transposase shares strongly conserved residues, including a fully conserved dipeptide,Asp-Glu (DE), and a block consisting of a fully conserved Asp and highly conserved Glu, separated by 34 or 35 residues (D35E). The conserved dipeptide is only present if ribosomal frameshifting occurs.; transposase complement(join(1286806..1287264,1287264..1287590)) Francisella tularensis subsp. tularensis FSC198 4199644 YP_667354.1 CDS yhhW NC_008245.1 1287614 1288327 R Similar to YC10_PSEAE (Q9I4C8) Hypothetical protein PA1210 from Pseudomonas aeruginosa (232 aa). FASTA: opt: 602 Z-score: 765.5 E(): 9.5e-35 Smith-Waterman score: 602; 41.667 identity in 228 aa overlap. This CDS is disrupted by the insertion of an ISFtu1 element occurring very near the C-terminal end. It is not clear whether this insertion affects the function of the protein.; pirin family protein complement(1287614..1288327) Francisella tularensis subsp. tularensis FSC198 4199105 YP_667355.1 CDS FTF1267 NC_008245.1 1288427 1289323 D Similar to Q8E7Z8 Transcriptional regulator, LysR family from Shewanella oneidensis (289 aa). FASTA: opt: 561 Z-score: 683.5 E(): 3.5e-30 Smith-Waterman score: 561; 32.423identity in 293 aa overlap. ORF ftt1267; LysR transcriptional regulator family protein 1288427..1289323 Francisella tularensis subsp. tularensis FSC198 4200508 YP_667356.1 CDS dnaJ1 NC_008245.1 1289337 1290461 R chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ complement(1289337..1290461) Francisella tularensis subsp. tularensis FSC198 4199354 YP_667357.1 CDS dnaK NC_008245.1 1290550 1292478 R heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK complement(1290550..1292478) Francisella tularensis subsp. tularensis FSC198 4199356 YP_667358.1 CDS grpE NC_008245.1 1292579 1293166 R with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE complement(1292579..1293166) Francisella tularensis subsp. tularensis FSC198 4200300 YP_667359.1 CDS mltA NC_008245.1 1293255 1294421 D Similar to Q81ZZ6 Putative membrane-bound lytic murein transglycosylase A transmembrane protein from Nitrosomonas europaea (440 aa). FASTA: opt: 821 Z-score: 989.7 E(): 3.1e-47 Smith-Waterman score: 821; 39.769 identity in 347 aa overlap.; membrane-bound lytic murein transglycosylase A (MLT) family protein 1293255..1294421 Francisella tularensis subsp. tularensis FSC198 4199849 YP_667360.1 CDS FTF1272 NC_008245.1 1294414 1295598 D Similar to Q8KB91 Protoporphyrinogen oxidase,putative from Chlorobium tepidum (399 aa). FASTA: opt: 594 Z-score: 698.0 E(): 5.5e-31 Smith-Waterman score: 673; 31.552 identity in 393 aa overlap. ORF ftt1272; hypothetical protein 1294414..1295598 Francisella tularensis subsp. tularensis FSC198 4200509 YP_667361.2 CDS rplM NC_008245.1 1295737 1296165 D in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 1295737..1296165 Francisella tularensis subsp. tularensis FSC198 4198989 YP_667362.2 CDS rpsI NC_008245.1 1296181 1296570 D forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 1296181..1296570 Francisella tularensis subsp. tularensis FSC198 4200341 YP_667363.1 CDS mglA NC_008245.1 1296630 1297247 D Similar to O52734 Macrophage growth locus A from Francisella novicida strain U112 (205 aa). FASTA: opt: 1275 Z-score: 1587.7 E(): 1.5e-80 Smith-Waterman score: 1275; 99.512 identity in 205 aa overlap (1-205:1-205).; macrophage growth locus subunit A 1296630..1297247 Francisella tularensis subsp. tularensis FSC198 4199842 YP_667364.1 CDS mglB NC_008245.1 1297249 1297656 D Identical to O52735 Macrophage growth locus B from Francisella novicida strain U112 (135 aa).; ClpXP protease specificity-enhancing factor 1297249..1297656 Francisella tularensis subsp. tularensis FSC198 4199843 YP_667365.1 CDS FTF1277c NC_008245.1 1297653 1298924 R Similar to Q88EE1 Sodium-solute symporter, putative from Pseudomonas putida (strain KT2440) (459 aa). FASTA: opt: 279 Z-score: 311.8 E(): 1.8e-09 Smith-Waterman score: 300; 20.863identity in 417 aa overlap. ORF ftt1277c; Sodium-solute symporter family protein complement(1297653..1298924) Francisella tularensis subsp. tularensis FSC198 4200510 YP_667366.1 CDS rnhB NC_008245.1 1298917 1299480 R RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII complement(1298917..1299480) Francisella tularensis subsp. tularensis FSC198 4200767 YP_667367.1 CDS yfhQ NC_008245.1 1299482 1300225 R Similar to Q8ZCR9 Putative SpoU-family rRNA methylase from Yersinia pestis (257 aa). FASTA: opt: 688 Z-score: 847.8 E(): 2.5e-39 Smith-Waterman score: 688; 47.755 identity in 245 aa overlap.; SpoU rRNA methylase family protein complement(1299482..1300225) Francisella tularensis subsp. tularensis FSC198 4199099 YP_667368.1 CDS ptsN NC_008245.1 1300218 1300673 R Similar to Q88PA0 Phosphotransferase system,nitrogen regulatory IIA protein from Pseudomonas putida (strain KT2440) (154 aa). FASTA: opt: 239 Z-score: 318.2 E(): 7.8e-10 Smith-Waterman score: 239; 26.316identity in 152 aa overlap.; PEP-dependent sugar PTS system family protein complement(1300218..1300673) Francisella tularensis subsp. tularensis FSC198 4199949 YP_667369.1 CDS yhbH NC_008245.1 1300710 1301006 R Similar to RP5M_PSEPK (P15592) Probable sigma(54) modulation protein from Pseudomonas putida (102 aa). FASTA: opt: 336 Z-score: 439.6 E(): 1.4e-16 Smith-Waterman score: 336; 54.839 identity in 93 aa overlap.; sigma-54 modulation protein complement(1300710..1301006) Francisella tularensis subsp. tularensis FSC198 4199103 YP_667370.1 CDS FTF1282 NC_008245.1 1301125 1301370 D ORF ftt1282; hypothetical protein 1301125..1301370 Francisella tularensis subsp. tularensis FSC198 4200511 YP_667371.1 CDS trmE NC_008245.1 1301376 1302728 D in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 1301376..1302728 Francisella tularensis subsp. tularensis FSC198 4199864 YP_667372.1 CDS FTF1284c NC_008245.1 1302738 1302932 R ORF ftt1284c; hypothetical protein complement(1302738..1302932) Francisella tularensis subsp. tularensis FSC198 4200512 YP_667373.1 CDS FTF1285c NC_008245.1 1302964 1303854 R Similar to Q8D448 Transcriptional regulator from Vibrio vulnificus (303 aa). FASTA: opt: 372 Z-score: 436.1 E(): 2.1e-16 Smith-Waterman score: 372; 28.571 identity in 294 aa overlap. ORF ftt1285c; LysR transcriptional regulator family protein complement(1302964..1303854) Francisella tularensis subsp. tularensis FSC198 4200513 YP_667374.1 CDS cbs NC_008245.1 1305262 1306185 D Similar to Q9BH24 Cystathionine beta-synthase 5 from Trypanosoma cruzi (384 aa). FASTA: opt: 540 Z-score: 651.0 E(): 2.3e-28 Smith-Waterman score: 542; 31.494 identity in 308 aa overlap.; cystathionine beta-synthase (cystein synthase) 1305262..1306185 Francisella tularensis subsp. tularensis FSC198 4200317 YP_667375.1 CDS FTF1288 NC_008245.1 1306439 1307008 D Similar to Q8Z651 Putative membrane protein from Salmonella typhi (204 aa). FASTA: opt: 462 Z-score: 553.9 E(): 5.9e-23 Smith-Waterman score: 462; 36.667 identity in 180 aa overlap. ORF ftt1288; hypothetical protein 1306439..1307008 Francisella tularensis subsp. tularensis FSC198 4200515 YP_667376.1 CDS metG NC_008245.1 1313866 1315890 D methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 1313866..1315890 Francisella tularensis subsp. tularensis FSC198 4199837 YP_667377.1 CDS FTF1291 NC_008245.1 1315856 1317130 D Similar to EXUT_BACSU (O34456) Hexuronate transporter from Bacillus subtilis (422 aa). FASTA: opt: 655 Z-score: 716.7 E(): 5e-32 Smith-Waterman score: 659; 28.250 identity in 400 aa overlap. ORF ftt1291; major facilitator transporter 1315856..1317130 Francisella tularensis subsp. tularensis FSC198 4200517 YP_667378.1 CDS FTF1292c NC_008245.1 1317127 1317729 R Similar to Q88YM1 Hypothetical protein from Lactobacillus plantarum (215 aa). FASTA: opt: 420 Z-score: 532.1 E(): 9.5e-22 Smith-Waterman score: 420; 35.025 identity in 197 aa overlap. ORF ftt1292c; hypothetical protein complement(1317127..1317729) Francisella tularensis subsp. tularensis FSC198 4200518 YP_667379.1 CDS FTF1293c NC_008245.1 1317779 1318393 R Similar to Q9KSS8 Hypothetical protein VC1178 from Vibrio cholerae (206 aa). FASTA: opt: 558 Z-score: 715.6 E(): 5.8e-32 Smith-Waterman score: 558; 42.703 identity in 185 aa overlap. ORF ftt1293c; Sua5_yciO_yrdC family protein complement(1317779..1318393) Francisella tularensis subsp. tularensis FSC198 4200519 YP_667380.1 CDS ispZ NC_008245.1 1318454 1318984 D Similar to ISPZ_RALSO (Q8XYL2) Probable intracellular septation protein from Ralstonia solanacearum (Pseudomonas solanacearum) (186 aa). FASTA: opt: 549 Z-score: 659.0 E(): 8.2e-29 Smith-Waterman score: 549; 38.150 identity in 173 aa overlap.; intracellular septation protein A family protein 1318454..1318984 Francisella tularensis subsp. tularensis FSC198 4199498 YP_667381.1 CDS glk1 NC_008245.1 1319323 1320339 R Similar to GLK_ANASP (P58616) Glucokinase from Anabaena sp. (strain PCC 7120) (342 aa). FASTA: opt: 735 Z-score: 904.6 E(): 1.7e-42 Smith-Waterman score: 735; 36.735 identity in 343 aa overlap.; glucose kinase complement(1319323..1320339) Francisella tularensis subsp. tularensis FSC198 4199785 YP_667382.1 CDS ubiE NC_008245.1 1320433 1321185 D Similar to Q8D1I3 COQ5 methyltransferase from Yersinia pestis (251 aa). FASTA: opt: 1184 Z-score: 1440.7 E(): 2.4e-72 Smith-Waterman score: 1184; 70.800 identity in 250 aa overlap.; menaquinone biosynthesis methyltransferase 1320433..1321185 Francisella tularensis subsp. tularensis FSC198 4198978 YP_667383.1 CDS FTF1297 NC_008245.1 1321169 1321774 D ORF ftt1297; hypothetical protein 1321169..1321774 Francisella tularensis subsp. tularensis FSC198 4200520 YP_667384.1 CDS ubiB NC_008245.1 1321767 1323425 D Similar to Q83A88 Ubiquinone biosynthesis protein AarF, putative from Coxiella burnetii (541 aa). FASTA: opt: 1682 Z-score: 2006.3 E(): 7.3e-104 Smith-Waterman score: 1682; 48.269 identity in 520 aa overlap. unrelated to the ABC transporter proteins.; 2-polyprenylphenol 6-hydroxylase 1321767..1323425 Francisella tularensis subsp. tularensis FSC198 4198977 YP_667385.1 CDS hitA NC_008245.1 1323431 1323769 D Similar to Q82WM8 HIT (Histidine triad) family from Nitrosomonas europaea (116 aa). FASTA: opt: 424 Z-score: 574.5 E(): 4.1e-24 Smith-Waterman score: 424; 53.571 identity in 112 aa overlap.; histidine triad (HIT) family protein 1323431..1323769 Francisella tularensis subsp. tularensis FSC198 4200196 YP_667386.1 CDS FTF1300c NC_008245.1 1323786 1323917 R ORF ftt1300c; hypothetical protein complement(1323786..1323917) Francisella tularensis subsp. tularensis FSC198 4200521 YP_667387.1 CDS FTF1302 NC_008245.1 1324916 1325746 D ORF ftt1302; hypothetical protein 1324916..1325746 Francisella tularensis subsp. tularensis FSC198 4200523 YP_667388.1 CDS FTF1303c NC_008245.1 1325748 1326623 R ORF ftt1303c; hypothetical protein complement(1325748..1326623) Francisella tularensis subsp. tularensis FSC198 4200524 YP_667389.1 CDS murB NC_008245.1 1326702 1327550 R Similar to MURB_THEMA (Q9X239) UDP-N-acetylenolpyruvoylglucosamine reductase from Thermotoga maritima (284 aa). FASTA: opt: 577 Z-score: 699.7 E(): 4.4e-31 Smith-Waterman score: 577; 39.273 identity in 275 aa overlap.; UDP-N-acetylenolpyruvoylglucosamine reductase complement(1326702..1327550) Francisella tularensis subsp. tularensis FSC198 4200105 YP_667390.1 CDS murA NC_008245.1 1327558 1328892 R Similar to Q814X9 UDP-N-acetylglucosamine 1-carboxyvinyltransferase from Bacillus cereus (strain ATCC 14579 / DSM 31) (434 aa). FASTA: opt: 697 Z-score: 859.3 E(): 5.6e-40 Smith-Waterman score: 765; 33.333 identity in 438 aa overlap.; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(1327558..1328892) Francisella tularensis subsp. tularensis FSC198 4200104 YP_667391.1 CDS engA NC_008245.1 1328831 1330228 R EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA complement(1328831..1330228) Francisella tularensis subsp. tularensis FSC198 4199675 YP_667392.1 CDS FTF1307c NC_008245.1 1330444 1330980 R ORF ftt1307c; hypothetical protein complement(1330444..1330980) Francisella tularensis subsp. tularensis FSC198 4200525 YP_667393.1 CDS FTF1308c NC_008245.1 1331025 1331633 R ORF ftt1308c; hypothetical protein complement(1331025..1331633) Francisella tularensis subsp. tularensis FSC198 4200526 YP_667394.1 CDS hflB NC_008245.1 1332772 1334688 R Similar to FTSH_ECO57 (Q8X9L0) Cell division protease ftsH from Escherichia coli O157:H7 (644 aa). FASTA: opt: 2569 Z-score: 2823.5 E(): 2.2e-149 Smith-Waterman score: 2569; 60.125 identity in 642 aa overlap.; ATP-dependent metalloprotease complement(1332772..1334688) Francisella tularensis subsp. tularensis FSC198 4200380 YP_667395.1 CDS yieO NC_008245.1 1334911 1336317 D Similar to Q8UHQ9 MFS permease from Agrobacterium tumefaciens (strain C58 / ATCC 33970) (475 aa). FASTA: opt: 757 Z-score: 760.1 E(): 1.9e-34 Smith-Waterman score: 766; 32.735 identity in 446 aa overlap.; major facilitator transporter 1334911..1336317 Francisella tularensis subsp. tularensis FSC198 4199109 YP_667396.1 CDS uvrA NC_008245.1 1336323 1339145 R Similar to UVRA_PSEAE (Q9HWG0) UvrABC system protein A (UvrA protein) from Pseudomonas aeruginosa (945 aa). FASTA: opt: 4062 Z-score: 4339.5 E():0 Smith-Waterman score: 4062; 63.800identity in 942 aa overlap.; DNA excision repair protein subunit A complement(1336323..1339145) Francisella tularensis subsp. tularensis FSC198 4198988 YP_667397.1 CDS greA NC_008245.1 1339184 1339666 R necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA complement(1339184..1339666) Francisella tularensis subsp. tularensis FSC198 4200297 YP_667398.1 CDS FTF1314c NC_008245.1 1339700 1340284 R Similar to Q8EBJ4 Type IV pilus biogenesis protein (164 aa). FASTA: opt: 157 Z-score: 204.8 E(): 0.0016 Smith-Waterman score: 157; 27.607 identity in 163 aa overlap. The pili fiber building block protein has a highly distinct primary structure; a short positively charged leader sequence, and a highly conserved and highly hydrophobic amino-terminal domain which forms the core of the pilus fiber; A variety of studies suggest that the invariant glycine (G) at -1 is required for prepilin cleavage and assembly and that the glutamate (E) at + 5 is essential for assembly and efficient N-terminal methylation but not cleavage. The region near the carboxy terminus is often hydrophilic and is stabilized by one or two disulfide bridges that may be involved in recognition of receptors. The genes with these characteristics are usually termed pilA, pilE, pilV, pilW, pilX and FimU. (Mattick John S.. 'Type IV Pili and twitching motility'. Annu. Rev. Microbiol. 2002. 56:289-314.) This protein has all the characteristics described above, except the glutamate (E) at + 5, but shows a weak global homology. ORF ftt1314c; Type IV pili fiber building block protein complement(1339700..1340284) Francisella tularensis subsp. tularensis FSC198 4200527 YP_667399.1 CDS pgi NC_008245.1 1340285 1341907 R functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase complement(1340285..1341907) Francisella tularensis subsp. tularensis FSC198 4199242 YP_667400.1 CDS FTF1316c NC_008245.1 1341894 1342547 R Similar to Q8R9T9 Thiamine pyrophosphokinase from Thermoanaerobacter tengcongensis (211 aa). FASTA: opt: 221 Z-score: 278.6 E(): 1.3e-07 Smith-Waterman score: 238; 25.943 identity in 212 aa overlap. ORF ftt1316c; thiamine pyrophospokinase complement(1341894..1342547) Francisella tularensis subsp. tularensis FSC198 4200528 YP_667401.1 CDS guaB NC_008245.1 1342613 1344073 R Similar to Q88P22 Inosine-5-monophosphate dehydrogenase from Pseudomonas putida (strain KT2440) (489 aa). FASTA: opt: 2187 Z-score: 2403.4 E(): 5.6e-126 Smith-Waterman score: 2187; 68.033 identity in 488 aa overlap.; inosine-5-monophosphate dehydrogenase complement(1342613..1344073) Francisella tularensis subsp. tularensis FSC198 4200366 YP_667402.1 CDS pepA NC_008245.1 1344174 1345613 R Similar to Q887M0 Cytosol aminopeptidase from Pseudomonas syringae (pv. tomato) (496 aa). FASTA: opt: 1161 Z-score: 1388.1 E(): 2e-69 Smith-Waterman score: 1165; 42.540 identity in 496 aa overlap.; cytosol aminopeptidase complement(1344174..1345613) Francisella tularensis subsp. tularensis FSC198 4199239 YP_667403.1 CDS FTF1319 NC_008245.1 1345779 1346861 D Similar to Q8EH61 Conserved hypothetical protein from Shewanella oneidensis (370 aa). FASTA: opt: 370 Z-score: 433.4 E(): 3e-16 Smith-Waterman score: 370; 21.508 identity in 358 aa overlap. ORF ftt1319; YjgP/YjgQ family permease 1345779..1346861 Francisella tularensis subsp. tularensis FSC198 4200529 YP_667404.1 CDS FTF1320 NC_008245.1 1346861 1347922 D Similar to Q8ZK26 Putative permease from Salmonella typhimurium (360 aa). FASTA: opt: 510 Z-score: 585.0 E(): 1.1e-24 Smith-Waterman score: 511; 27.147 identity in 361 aa overlap. ORF ftt1320; YjgP/YjgQ family permease 1346861..1347922 Francisella tularensis subsp. tularensis FSC198 4200530 YP_667405.1 CDS FTF1321 NC_008245.1 1347930 1349183 D Similar to Q83AI4 Peptidase, M16 family from Coxiella burnetii (459 aa). FASTA: opt: 868 Z-score: 1053.1 E(): 9.1e-51 Smith-Waterman score: 868; 34.158 identity in 404 aa overlap. ORF ftt1321; peptidase M16 family protein 1347930..1349183 Francisella tularensis subsp. tularensis FSC198 4200531 YP_667406.1 CDS FTF1322 NC_008245.1 1349190 1350413 D Similar to Q83AI5 Peptidase, M16 family from Coxiella burnetii (443 aa). FASTA: opt: 605 Z-score: 727.1 E(): 1.3e-32 Smith-Waterman score: 605; 28.607 identity in 402 aa overlap. ORF ftt1322; peptidase M16 family protein 1349190..1350413 Francisella tularensis subsp. tularensis FSC198 4200532 YP_667407.1 CDS FTF1323 NC_008245.1 1350414 1350992 D Similar to YHHF_HAEIN (P44869) Putative methylase HI0767 from Haemophilus influenzae (193 aa). FASTA: opt: 455 Z-score: 588.3 E(): 7e-25 Smith-Waterman score: 455; 42.697 identity in 178 aa overlap. ORF ftt1323; methylase 1350414..1350992 Francisella tularensis subsp. tularensis FSC198 4200533 YP_667408.1 CDS FTF1324 NC_008245.1 1351026 1351676 D Similar to Q9CM99 Hypothetical protein PM0935 from Pasteurella multocida (226 aa). FASTA: opt: 523 Z-score: 599.4 E(): 1.7e-25 Smith-Waterman score: 523; 39.151 identity in 212 aa overlap. ORF ftt1324; hypothetical protein 1351026..1351676 Francisella tularensis subsp. tularensis FSC198 4200552 YP_667409.1 CDS miaE NC_008245.1 1351729 1352340 R Similar to Q88KV1 TRNA-(ms(2)io(6)a)-hydroxylase,putative from Pseudomonas putida (strain KT2440)(205 aa). FASTA: opt: 660 Z-score: 867.5 E(): 2e-40 Smith-Waterman score: 660; 50.777 identity in 193 aa overlap.; tRNA-(ms(2)io(6)a)-hydroxylase complement(1351729..1352340) Francisella tularensis subsp. tularensis FSC198 4199845 YP_667410.1 CDS udp NC_008245.1 1352456 1353259 D Similar to Q9CKN8 Udp from Pasteurella multocida (252 aa). FASTA: opt: 817 Z-score: 1065.9 E(): 1.8e-51 Smith-Waterman score: 817; 48.760 identity in 242 aa overlap.; uridine phosphorylase 1352456..1353259 Francisella tularensis subsp. tularensis FSC198 4198982 YP_667411.1 CDS cdd NC_008245.1 1353280 1353681 D Similar to Q8RCG7 Cytidine deaminase from Thermoanaerobacter tengcongensis (135 aa). FASTA: opt: 413 Z-score: 565.4 E(): 1.3e-23 Smith-Waterman score: 413; 52.273 identity in 132 aa overlap.; cytidine deaminase 1353280..1353681 Francisella tularensis subsp. tularensis FSC198 4200319 YP_667412.1 CDS FTF1328c NC_008245.1 1353879 1356908 R Similar to Q8EDV0 Oxidoreductase,FAD-binding,putative from Shewanella oneidensis (1013 aa). FASTA: opt: 1758 Z-score: 1886.5 E(): 3.1e-97 Smith-Waterman score: 2679; 40.573 identity in 1013 aa overlap. Contains a frameshift after aa 89. ORF ftt1328c; hypothetical protein complement(1353879..1356908) Francisella tularensis subsp. tularensis FSC198 4200553 YP_667413.1 CDS gpmI NC_008245.1 1357128 1358666 D catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 1357128..1358666 Francisella tularensis subsp. tularensis FSC198 4200295 YP_667414.1 CDS serS NC_008245.1 1358681 1359961 D catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 1358681..1359961 Francisella tularensis subsp. tularensis FSC198 4200743 YP_667415.1 CDS cscK NC_008245.1 1360071 1360970 D Similar to Q97IW7 Fructokinase from Clostridium acetobutylicum (288 aa). FASTA: opt: 932 Z-score: 1175.6 E(): 1.4e-57 Smith-Waterman score: 932; 47.603identity in 292 aa overlap.; fructokinase 1360071..1360970 Francisella tularensis subsp. tularensis FSC198 4200276 YP_667416.1 CDS FTF1332 NC_008245.1 1361048 1362307 D Similar to Q9X4C7 Repeat unit exporter from Escherichia coli (419 aa). FASTA: opt: 324 Z-score: 369.2 E(): 1.1e-12 Smith-Waterman score: 324; 22.604 identity in 407 aa overlap. ORF ftt1332; polysaccharide biosynthesis protein (export protein) 1361048..1362307 Francisella tularensis subsp. tularensis FSC198 4200554 YP_667417.1 CDS FTF1333c NC_008245.1 1362311 1362511 R ORF ftt1333c; hypothetical protein complement(1362311..1362511) Francisella tularensis subsp. tularensis FSC198 4200555 YP_667418.1 CDS FTF1334c NC_008245.1 1362539 1363048 R ORF ftt1334c; hypothetical protein complement(1362539..1363048) Francisella tularensis subsp. tularensis FSC198 4200556 YP_667419.1 CDS cydD NC_008245.1 1363425 1365206 D in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; cysteine/glutathione ABC transporter membrane/ATP-binding protein 1363425..1365206 Francisella tularensis subsp. tularensis FSC198 4200285 YP_667420.1 CDS cydC NC_008245.1 1365203 1366852 D in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; cysteine/glutathione ABC transporter membrane/ATP-binding protein 1365203..1366852 Francisella tularensis subsp. tularensis FSC198 4200284 YP_667421.1 CDS dctA NC_008245.1 1366854 1368104 R Similar to DTA2_PSEAE (Q9I4F5) C4-dicarboxylate transport protein from Pseudomonas aeruginosa (436 aa). FASTA: opt: 1534 Z-score: 1703.1 E(): 5.7e-87 Smith-Waterman score: 1534; 55.206identity in 413 aa overlap.; C4-dicarboxylate transport protein complement(1366854..1368104) Francisella tularensis subsp. tularensis FSC198 4199528 YP_667422.1 CDS FTF1338c NC_008245.1 1368243 1368623 R Similar to Q99WA6 SA0455 protein (Translation initiation inhibitor homologue) from Staphylococcus aureus (126 aa). FASTA: 452 opt: 452 Z-score: 597.7 E(): 2.1e-25 Smith-Waterman score: 452; 61.017 identity in 118 aa overlap. ORF ftt1338c; translation initiation inhibitor complement(1368243..1368623) Francisella tularensis subsp. tularensis FSC198 4200557 YP_667423.1 CDS FTF1339c NC_008245.1 1368623 1370167 R Similar to Q87N13 Sulfate permease family protein from Vibrio parahaemolyticus (519 aa). FASTA: opt: 1333 Z-score: 1472.3 E(): 4.1e-74 Smith-Waterman score: 1602; 47.398 identity in 538 aa overlap. ORF ftt1339c; sulfate permease family protein complement(1368623..1370167) Francisella tularensis subsp. tularensis FSC198 4200558 YP_667424.1 CDS isftu2 NC_008245.1 1370286 1371029 R ISFtu2. Transposase, member of the IS5 family. Identical to Q8GM03 putative transposase from Francisella tularensis (247 aa).; transposase complement(1370286..1371029) Francisella tularensis subsp. tularensis FSC198 4199294 YP_667425.1 CDS FTF1341 NC_008245.1 1371230 1371886 D Similiar to CAD85637 (Q82TY8) Putative integral membrane transmembrane protein from Nitrosomonas europaea (221 aa). FASTA: 670 Z-score: 817.1 E(): 1.2e-37 50.226identity in 221 aa overlap ORF ftt1341; hypothetical protein 1371230..1371886 Francisella tularensis subsp. tularensis FSC198 4200559 YP_667426.1 CDS FTF1342 NC_008245.1 1372000 1373055 D Similar to Q08861 Gamma-aminobutyric acid-grated chloride- ion channel/receptor, zeta subunit, precusor from Lymnaea stagnalis (437 aa). FASTA: opt: 357 Z-score: 407.4 E(): 7.7e-15 Smith-Waterman score: 360; 23.510 identity in 302 aa overlap ORF ftt1342; hypothetical protein 1372000..1373055 Francisella tularensis subsp. tularensis FSC198 4200560 YP_667427.1 CDS FTF1343c NC_008245.1 1373350 1374159 R ORF ftt1343c; hypothetical protein complement(1373350..1374159) Francisella tularensis subsp. tularensis FSC198 4200561 YP_667428.1 CDS pdpA1 NC_008245.1 1379766 1382228 D Similar to AAP58968.1 (Q7X3I9) PdpA from Francisella novicida (820 aa). BLAST Score = 1545 bits (4000), Expect = 0.0 Identities = 777/820 (94), Positives = 787/820 (95) Identical to FTF1699. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625; hypothetical protein 1379766..1382228 Francisella tularensis subsp. tularensis FSC198 4199230 YP_667429.1 CDS pdpB1 NC_008245.1 1382233 1385514 D Similar to AAP58967.1 (Q7X3J0) PdpB from Francisella novicida (1093 aa). BLAST Score = 1914 bits (4959), Expect = 0.0 Identities = 975/1093 (89),Positives = 988/1093 (90) Identical to FTF1700. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625; hypothetical protein 1382233..1385514 Francisella tularensis subsp. tularensis FSC198 4199232 YP_667430.1 CDS FTF1346 NC_008245.1 1385504 1385881 D Identical to FTF1701. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625 ORF ftt1346; hypothetical protein 1385504..1385881 Francisella tularensis subsp. tularensis FSC198 4200562 YP_667431.1 CDS FTF1347 NC_008245.1 1385894 1386388 D Similar to AAP58969.1 (Q7XI38) unknown protein from Francisella novicida (164 aa). BLAST Score = 305 bits (780), Expect = 2e-82 Identities = 163/164 (99),Positives = 163/164 (99) Identical to FTF1702. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625 ORF ftt1347; hypothetical protein 1385894..1386388 Francisella tularensis subsp. tularensis FSC198 4200563 YP_667432.1 CDS FTF1348 NC_008245.1 1386393 1388123 D 1-213 aa similar to AAP58970.1 (Q7X3I7) unknown Francisella novicida (212 aa). BLAST Score 352 ,Expect = 1e-95 Identities = 177/209 (84), Positives = 189/209 (90). 330-580aa similar to AAP58971.1 (Q7X3I6) unknown protein from Francisella tularensis subsp. novicida (251 aa). BLAST Score = 483 bits (1244), Expect = e-135 Identities = 243/251 (96), Positives = 249/251 (99). Identical to FTF1703. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625. Protein fusion product of two hypothetical proteins in F. novicida. ORF ftt1348; hypothetical protein 1386393..1388123 Francisella tularensis subsp. tularensis FSC198 4200564 YP_667433.1 CDS FTF1349 NC_008245.1 1388124 1388645 D Similar to AAP58972.1 (Q7X3I5) unknown protein from Francisella novicida (173 aa). BLAST Score = 336, Expect = 1e-91 Identities = 170/173 (98), Positives = 171/173 (98) Identical to FTF1704. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625 ORF ftt1349; hypothetical protein 1388124..1388645 Francisella tularensis subsp. tularensis FSC198 4200565 YP_667434.1 CDS FTF1350 NC_008245.1 1388658 1390088 D Similar to AAP58973.1 (Q7X3I4) unknown protein from Francisella novicida (476 aa). BLAST Score = 864 bits (2233), Expect = 0.0 Identities = 433/476 (90),Positives = 437/476 (91) Identical to FTF1705. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625 ORF ftt1350; hypothetical protein 1388658..1390088 Francisella tularensis subsp. tularensis FSC198 4200566 YP_667435.1 CDS FTF1351 NC_008245.1 1390101 1390724 D Similar to AAP58974.1 (Q7X3I3) unknown protein from Francisella novicida (207 aa). BLAST Score = 391 bits (1005), Expect = e-108 Identities = 194/207 (93),Positives = 195/207 (94) Identical to FTF1706. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625 ORF ftt1351; hypothetical protein 1390101..1390724 Francisella tularensis subsp. tularensis FSC198 4200567 YP_667436.1 CDS FTF1352 NC_008245.1 1390746 1391897 D Similar to AAP58975.1 (Q7X3I2) unknown protein from Francisella novicida (262 aa), BLAST Score = 443 bits (1140), Expect = e-12 Identities = 229/262 (87),Positives = 235/262 (89) This protein is identical to FTF1707. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625 ORF ftt1352; hypothetical protein 1390746..1391897 Francisella tularensis subsp. tularensis FSC198 4200568 YP_667437.1 CDS FTF1353 NC_008245.1 1391863 1392636 D Similar to AAP58976.1 (Q7X3I1) unknown protein from Francisella novicida (257 aa). BLAST Score = 412, Expect = e-114 Identities = 213/257 (82), Positives = 213/257 (82) Identical to FTF1708. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625. ORF ftt1353; hypothetical protein 1391863..1392636 Francisella tularensis subsp. tularensis FSC198 4200569 YP_667438.1 CDS pdpC1 NC_008245.1 1392676 1396662 D Similar to AAP58966.1 PdpC from Francisella novicida (1218 aa). BLAST Score = 2172, Expect = 0.0 Identities = 1089/1220 (89), Positives = 1120/1220 (91),Gaps = 3/1220 (0) Identical to FTF1709. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625; hypothetical protein 1392676..1396662 Francisella tularensis subsp. tularensis FSC198 4199234 YP_667439.1 CDS FTF1355 NC_008245.1 1396680 1397255 D Similar to AAP58977.1 (Q7X3I0) unknown protein from Francisella novicida (188 aa). BLAST Score = 321, Expect = 3e-87 Identities = 156/174 (89), Positives = 162/174 (93) Identical to FTF1710. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625 ORF ftt1355; hypothetical protein 1396680..1397255 Francisella tularensis subsp. tularensis FSC198 4200570 YP_667440.1 CDS iglD1 NC_008245.1 1397262 1398467 R Similar to AAP58965.1 (Q7C3J6) IglD from Francisella novicida (398 aa). BLAST Score = 746, Expect = 0.0 Identities = 382/398 (95), Positives = 383/398 (96) Identical to FTF1711. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625; intracellular growth locus, subunit D complement(1397262..1398467) Francisella tularensis subsp. tularensis FSC198 4200659 YP_667441.1 CDS iglC1 NC_008245.1 1398479 1399114 R Similar to AAP58964.1 (Q7X3J5) IglC (23 kDa protein) from Francisella novicida (211 aa). BLAST Score = 405, Expect = e-112 Identities = 209/211 (99), Positives = 210/211 (99) Identical to FTF1712. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625; intracellular growth locus, subunit C complement(1398479..1399114) Francisella tularensis subsp. tularensis FSC198 4200657 YP_667442.1 CDS iglB1 NC_008245.1 1399125 1400669 R Similar to AAP58963.1 (Q7X3J4) IglB from Francisella novicida (514 aa). BLAST Score = 997, Expect = 0.0 Identities = 496/514 (96), Positives = 499/514 (97) Identical to FTF1713. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625; intracellular growth locus, subunit B complement(1399125..1400669) Francisella tularensis subsp. tularensis FSC198 4200655 YP_667443.1 CDS iglA1 NC_008245.1 1400659 1401249 R Similar to AAP58962.1 (Q7X3J5) IglA from Francisella novicida (184 aa). BLAST Score = 350, Expect = 6e-96 Identities = 181/184 (98), Positives = 181/184 (98) Identical to FTF1714. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625; intracellular growth locus, subunit A complement(1400659..1401249) Francisella tularensis subsp. tularensis FSC198 4200653 YP_667444.1 CDS pdpD1 NC_008245.1 1401294 1404881 R Similar to AAP58961.1 (Q7C3J6) PdpD from Francisella novicida (1245 aa). BLAST Score = 2194, Expect = 0.0 Identities = 1133/1245 (91), Positives = 1154/1245 (92), Gaps = 50/1245 (4) Identical to FTF1715. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625; hypothetical protein complement(1401294..1404881) Francisella tularensis subsp. tularensis FSC198 4199236 YP_667445.1 CDS isftu1 NC_008245.1 1407237 1408021 R ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and also mariner elements, show that this transposase shares strongly conserved residues, including a fully conserved dipeptide,Asp-Glu (DE), and a block consisting of a fully conserved Asp and highly conserved Glu, separated by 34 or 35 residues (D35E). The conserved dipeptide is only present if ribosomal frameshifting occurs.; transposase complement(join(1407237..1407695,1407695..1408021)) Francisella tularensis subsp. tularensis FSC198 4199646 YP_667446.1 CDS fbaB NC_008245.1 1410047 1411111 R class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis; fructose-1,6-bisphosphate aldolase complement(1410047..1411111) Francisella tularensis subsp. tularensis FSC198 4199405 YP_667447.1 CDS pyk NC_008245.1 1411124 1412560 R Similar to AAO91275 (Q83AU7) Pyruvate kinase from Coxiella burnetii (477 aa). FASTA: opt: 1622 Z-score: 1687.6 E(): 3.8e-86 Smith-Waterman score: 1622; 53.249identity in 477 aa overlap domain, score 55.8,E-value 8.1e-14; pyruvate kinase complement(1411124..1412560) Francisella tularensis subsp. tularensis FSC198 4199128 YP_667448.1 CDS pgk NC_008245.1 1412576 1413754 R Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase complement(1412576..1413754) Francisella tularensis subsp. tularensis FSC198 4199243 YP_667449.1 CDS gapA NC_008245.1 1413773 1414819 R Similar to Q8XKT9 Glyceraldehyde-3-phosphate dehydrogenase from Clostridium perfringens (332 aa). FASTA: opt: 1511 Z-score: 1671.9 E(): 2.8e-85 Smith-Waterman score: 1511; 71.341identity in 328 aa overlap; glyceraldehyde-3-phosphate dehydrogenase complement(1413773..1414819) Francisella tularensis subsp. tularensis FSC198 4199272 YP_667450.1 CDS tktA NC_008245.1 1414812 1416803 R catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase complement(1414812..1416803) Francisella tularensis subsp. tularensis FSC198 4199146 YP_667451.1 CDS FTF1370 NC_008245.1 1416943 1417446 D Similar to AAN42711 (Q83LI4) Orf, conserved hypothetical protein from Shigella flexneri (173 aa). FASTA: opt: 194 Z-score: 254.2 E(): 2.6e-06 Smith-Waterman score: 194; 26.708 identity in 161 aa overlap ORF ftt1370; hypothetical protein 1416943..1417446 Francisella tularensis subsp. tularensis FSC198 4199953 YP_667452.1 CDS rpmF NC_008245.1 1417490 1417672 D some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 1417490..1417672 Francisella tularensis subsp. tularensis FSC198 4199224 YP_667453.1 CDS plsX NC_008245.1 1417771 1418817 D involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; putative glycerol-3-phosphate acyltransferase PlsX 1417771..1418817 Francisella tularensis subsp. tularensis FSC198 4199734 YP_667454.1 CDS fabH NC_008245.1 1418914 1419885 D Similar to Q9JW56 Putative 3-oxoacyl-[acyl-carrier-protein] synthase III from Neisseria meningitidis (320 aa). FASTA: opt: 1148 Z-score: 1323.1 E(): 7.6e-66 Smith-Waterman score: 1148; 54.859 identity in 319 aa overlap; 3-oxoacyl-ACP synthase 1418914..1419885 Francisella tularensis subsp. tularensis FSC198 4199681 YP_667455.1 CDS FTF1374 NC_008245.1 1419933 1420853 D Similar to Q9CJS7 FabD from Pasteurella multocida (312 aa). FASTA: opt: 984 Z-score: 1099.0 E(): 2.3e-53 Smith-Waterman score: 984;50.163 identity in 307 aa overlap ORF ftt1374; malonyl CoA-acyl carrier protein transacylase 1419933..1420853 Francisella tularensis subsp. tularensis FSC198 4199954 YP_667456.1 CDS fabG NC_008245.1 1420867 1421610 D Similar to Q9CJS6 FabG from Pasteurella multocida (242 aa). FASTA: opt: 1029 Z-score: 1192.2 E(): 1.5e-58 Smith-Waterman score: 1029; 66.667 identity in 240 aa overlap; 3-oxoacyl-(acyl-carrier-protein) reductase 1420867..1421610 Francisella tularensis subsp. tularensis FSC198 4199680 YP_667457.1 CDS acpP NC_008245.1 1421706 1421990 D carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 1421706..1421990 Francisella tularensis subsp. tularensis FSC198 4199754 YP_667458.1 CDS fabF NC_008245.1 1422070 1423329 D Similar to Q8Y0J0 Probable 3-oxoacyl-[acyl-carrier-protein] synthase II from Ralstonia solanacearum (410 aa). FASTA: opt: 1679 Z-score: 1887.3 E(): 2.8e-97 Smith-Waterman score: 1679; 59.233 identity in 417 aa overlap; 3-oxoacyl-ACP synthase 1422070..1423329 Francisella tularensis subsp. tularensis FSC198 4199679 YP_667459.1 CDS suhB NC_008245.1 1426910 1427698 D Similar to P22783 Inositol-1-monophosphatase from E. coli (267 aa). FASTA: opt: 630 Z-score: 759.0 E(): 2e-34 Smith-Waterman score: 656; 36.882identity in 263 aa overlap; inositol-1-monophosphatase 1426910..1427698 Francisella tularensis subsp. tularensis FSC198 4199091 YP_667460.1 CDS sun NC_008245.1 1427698 1428978 D Similar to P44788 SUN protein (FMU protein) from Haemophilus influenzae (451 aa). FASTA: opt: 956 Z-score: 1079.4 E(): 2.9e-52 Smith-Waterman score: 956; 39.401 identity in 434 aa overlap; Sun protein 1427698..1428978 Francisella tularensis subsp. tularensis FSC198 4199092 YP_667461.1 CDS FTF1384c NC_008245.1 1428956 1429447 R Similar to Q8D9X5 Probable acetyltransferase from Vibrio vulnificus (141 aa). FASTA: opt: 183 Z-score: 242.0 E(): 1.3e-05 Smith-Waterman score: 183; 27.132 identity in 129 aa overlap ORF ftt1384c; acetyltransferase complement(1428956..1429447) Francisella tularensis subsp. tularensis FSC198 4199959 YP_667462.1 CDS FTF1385c NC_008245.1 1429540 1429809 R ORF ftt1385c; hypothetical protein complement(1429540..1429809) Francisella tularensis subsp. tularensis FSC198 4199960 YP_667463.1 CDS isftu1 NC_008245.1 1429800 1430584 D ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and also mariner elements, show that this transposase shares strongly conserved residues, including a fully conserved dipeptide,Asp-Glu (DE), and a block consisting of a fully conserved Asp and highly conserved Glu, separated by 34 or 35 residues (D35E). The conserved dipeptide is only present if ribosomal frameshifting occurs.; transposase join(1429800..1430126,1430126..1430584) Francisella tularensis subsp. tularensis FSC198 4199647 YP_667464.1 CDS ligN NC_008245.1 1431030 1433066 R Similar to P43813 DNA ligase from Haemophilus influenzae (679 aa). FASTA: opt: 2154 Z-score: 2353.2 E(): 3.2e-123 Smith-Waterman score: 2154; 48.817 identity in 676 aa overlap; DNA ligase complement(1431030..1433066) Francisella tularensis subsp. tularensis FSC198 4199553 YP_667465.1 CDS FTF1388 NC_008245.1 1433374 1434090 D Similar to AAO81619 (Q833S4) Conserved domain protein from Enterococcus faecalis (281 aa). FASTA: opt: 171 Z-score: 214.0 E(): 0.00046 Smith-Waterman score: 194;26.337 identity in 243 aa overlap ORF ftt1388; hypothetical protein 1433374..1434090 Francisella tularensis subsp. tularensis FSC198 4199961 YP_667466.1 CDS panB NC_008245.1 1434092 1434886 D catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 1434092..1434886 Francisella tularensis subsp. tularensis FSC198 4200090 YP_667467.1 CDS panC NC_008245.1 1434873 1435658 D Similar to AAO89975 (Q83EA3) Pantoate-beta-alanine ligase from Coxiella burnetii (257 aa). FASTA: opt: 692 Z-score: 830.8 E(): 2e-38 Smith-Waterman score: 692; 40.927 identity in 259 aa overlap; pantoate-beta-alanine ligase 1434873..1435658 Francisella tularensis subsp. tularensis FSC198 4200091 YP_667468.1 CDS panD NC_008245.1 1435652 1435987 D Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 1435652..1435987 Francisella tularensis subsp. tularensis FSC198 4200092 YP_667469.1 CDS FTF1392 NC_008245.1 1435991 1436761 D type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase 1435991..1436761 Francisella tularensis subsp. tularensis FSC198 4199962 YP_667470.1 CDS recD NC_008245.1 1436770 1438638 R Similar to Q9RPH5 RecD from Mycobacterium smegmatis (554 aa). FASTA: opt: 593 Z-score: 627.7 E(): 4.1e-27 Smith-Waterman score: 776; 32.510 identity in 486 aa overlap; exodeoxyribonuclease V subunit alpha complement(1436770..1438638) Francisella tularensis subsp. tularensis FSC198 4200602 YP_667471.1 CDS recB NC_008245.1 1438604 1442257 R Similar to Q8EF45 Exodeoxyribonuclease V,beta subunit from Shewanella oneidensis (1259 aa). FASTA: opt: 742 Z-score: 770.7 E(): 4.5e-35 Smith-Waterman score: 1544; 30.448identity in 1317 aa overlap; exodeoxyribonuclease V subunit beta complement(1438604..1442257) Francisella tularensis subsp. tularensis FSC198 4200600 YP_667472.1 CDS FTF1395c NC_008245.1 1442329 1443759 R Similar Q8A303 ATP-dependent DNA helicase from Bacteriodes thetaiotamicron (511 aa). FASTA: opt: 496 Z-score: 533.4 E(): 7.4e-22 Smith-Waterman score: 815; 32.200 identity in 500 aa overlap ORF ftt1395c; ATP-dependent DNA helicase complement(1442329..1443759) Francisella tularensis subsp. tularensis FSC198 4199963 YP_667473.1 CDS FTF1396c NC_008245.1 1443902 1444480 R Similar to AAO81663 (Q833N3) Conserved hypothetical protein from Entercoccus faecalis (203 aa). FASTA: opt: 155 Z-score: 198.6 E(): 0.0033 Smith-Waterman score: 155; 25.850 identity in 147 aa overlap ORF ftt1396c; hypothetical protein complement(1443902..1444480) Francisella tularensis subsp. tularensis FSC198 4199964 YP_667474.1 CDS recC NC_008245.1 1444416 1447655 R Similar to P44945 Exodeoxyribonuclease V gamma chain from Haemophilus influenzae (1121 aa). FASTA: opt: 1139 Z-score: 1214.3 E(): 8.7e-60 Smith-Waterman score: 1433; 28.344 identity in 1129 aa overlap; exodeoxyribonuclease V subunit gamma complement(1444416..1447655) Francisella tularensis subsp. tularensis FSC198 4200601 YP_667475.1 CDS FTF1399 NC_008245.1 1449494 1450363 D Similar to Q8KH10 Conserved hypothetical integral membrane (299 aa). FASTA: opt: 516 Z-score: 612.8 E(): 2.8e-26 Smith-Waterman score: 516; 29.818 identity in 275 aa overlap ORF ftt1399; hypothetical protein 1449494..1450363 Francisella tularensis subsp. tularensis FSC198 4199966 YP_667476.1 CDS FTF1400c NC_008245.1 1450377 1450763 R ORF ftt1400c; hypothetical protein complement(1450377..1450763) Francisella tularensis subsp. tularensis FSC198 4199967 YP_667477.1 CDS FTF1401 NC_008245.1 1450920 1451585 D Similar to Q8HA35 Repressor (217 aa). FASTA: opt: 183 Z-score: 217.7 E(): 0.00028 Smith-Waterman score: 225; 29.167 identity in 216 aa overlap ORF ftt1401; prophage repressor protein 1450920..1451585 Francisella tularensis subsp. tularensis FSC198 4199968 YP_667478.1 CDS FTF1402c NC_008245.1 1452157 1453791 R ORF ftt1402c; hypothetical protein complement(1452157..1453791) Francisella tularensis subsp. tularensis FSC198 4199761 YP_667479.1 CDS feoA NC_008245.1 1453808 1454032 R Similar to P33649 Ferrous iron transport protein A from E. coli (75 aa). FASTA: opt: 148 Z-score: 228.5 E(): 7.1e-05 Smith-Waterman score: 148; 31.081 identity in 74 aa overlap; ferrous iron transport protein A complement(1453808..1454032) Francisella tularensis subsp. tularensis FSC198 4199408 YP_667480.1 CDS FTF1404 NC_008245.1 1454141 1454848 D Similar to Q8E9Y6 Cell division protein FtsN from Shewanella oneidensis (231 aa). FASTA: opt: 157 Z-score: 187.2 E(): 0.014 Smith-Waterman score: 180; 27.094 identity in 203 aa overlap ORF ftt1404; cell division protein 1454141..1454848 Francisella tularensis subsp. tularensis FSC198 4199762 YP_667481.1 CDS gloB NC_008245.1 1454926 1455684 R Similar to Q47677 Probable hydroxyacylglutathione hydrolase from E. coli (251 aa). FASTA: opt: 426 Z-score: 519.2 E(): 4.6e-21 Smith-Waterman score: 426; 36.290 identity in 248 aa overlap; hydroxyacylglutathione hydrolase complement(1454926..1455684) Francisella tularensis subsp. tularensis FSC198 4199792 YP_667482.1 CDS FTF1406c NC_008245.1 1455698 1456855 R ORF ftt1406c; hypothetical protein complement(1455698..1456855) Francisella tularensis subsp. tularensis FSC198 4199763 YP_667483.1 CDS FTF1407c NC_008245.1 1456852 1457937 R ORF ftt1407c; hypothetical protein complement(1456852..1457937) Francisella tularensis subsp. tularensis FSC198 4199764 YP_667484.1 CDS hemD NC_008245.1 1457903 1458652 R Similar to Q980U3 Uroporphyrinogen III synthase,putative from Sulfolobus solfataricus (237 aa). FASTA: opt: 171 Z-score: 213.0 E(): 0.00052 Smith-Waterman score: 171; 34.746 identity in 118 aa overlap; uroporphyrinogen III synthase complement(1457903..1458652) Francisella tularensis subsp. tularensis FSC198 4200373 YP_667485.1 CDS FTF1409c NC_008245.1 1458653 1459069 R Similar to Q8PK22 Hypothetical protein from Xanthomonas axonopodis (145 aa). FASTA: opt: 415 Z-score: 523.5 E(): 2.6e-21 Smith-Waterman score: 415; 45.652 identity in 138 aa overlap ORF ftt1409c; hypothetical protein complement(1458653..1459069) Francisella tularensis subsp. tularensis FSC198 4199765 YP_667486.1 CDS FTF1410 NC_008245.1 1459767 1460312 D Similar to Q8XTB4 Probable transmembrane protein from Ralstonia solanacearum (184 aa). FASTA: opt: 443 Z-score: 558.2 E(): 3e-23 Smith-Waterman score: 443; 42.045 identity in 176 aa overlap ORF ftt1410; hypothetical protein 1459767..1460312 Francisella tularensis subsp. tularensis FSC198 4199766 YP_667487.1 CDS proS NC_008245.1 1462901 1464598 D catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 1462901..1464598 Francisella tularensis subsp. tularensis FSC198 4199944 YP_667488.1 CDS FTF1413 NC_008245.1 1464744 1465874 D Similar to Q886Y5 Aminotransferase, classes I and II from Pseudomonas syringae (382 aa). FASTA: opt: 929 Z-score: 1036.9 E(): 6.6e-50 Smith-Waterman score: 929; 37.076 identity in 383 aa overlap ORF ftt1413; aminotransferase 1464744..1465874 Francisella tularensis subsp. tularensis FSC198 4199768 YP_667489.1 CDS FTF1414 NC_008245.1 1465874 1466356 D ORF ftt1414; hypothetical protein 1465874..1466356 Francisella tularensis subsp. tularensis FSC198 4199769 YP_667490.1 CDS FTF1415 NC_008245.1 1466464 1467366 D ORF ftt1415; hypothetical protein 1466464..1467366 Francisella tularensis subsp. tularensis FSC198 4199770 YP_667491.1 CDS FTF1416c NC_008245.1 1467418 1467831 R ORF ftt1416c; lipoprotein complement(1467418..1467831) Francisella tularensis subsp. tularensis FSC198 4199771 YP_667492.1 CDS FTF1417 NC_008245.1 1467985 1468770 D Similar to Q8ZRJ8 Putative amidohydrolase from Salmonella typhimurium (255 aa). FASTA: opt: 723 Z-score: 882.8 E(): 2.6e-41 Smith-Waterman score: 723; 43.359 identity in 256 aa overlap ORF ftt1417; carbon-nitrogen hydrolase 1467985..1468770 Francisella tularensis subsp. tularensis FSC198 4199772 YP_667493.1 CDS nusB NC_008245.1 1468754 1469179 R Similar to Q889Q5 N utilization substance protein B from Pseudomonas syringae (165 aa). FASTA: opt: 274 Z-score: 347.8 E(): 1.6e-11 Smith-Waterman score: 274; 32.847 identity in 137 aa overlap; N utilisation substance protein B complement(1468754..1469179) Francisella tularensis subsp. tularensis FSC198 4200758 YP_667494.1 CDS FTF1419 NC_008245.1 1469366 1469692 D ORF ftt1419; lipoprotein 1469366..1469692 Francisella tularensis subsp. tularensis FSC198 4199773 YP_667495.1 CDS FTF1420 NC_008245.1 1469825 1470292 D ORF ftt1420; hypothetical protein 1469825..1470292 Francisella tularensis subsp. tularensis FSC198 4199774 YP_667496.1 CDS FTF1421 NC_008245.1 1470511 1470960 D Similar to Q88E79 Conserved hypothetical protein from Pseudomonas putida (150 aa). FASTA: opt: 511 Z-score: 638.2 E(): 1.1e-27 Smith-Waterman score: 511; 46.809 identity in 141 aa overlap ORF ftt1421; hypothetical protein 1470511..1470960 Francisella tularensis subsp. tularensis FSC198 4199775 YP_667497.1 CDS FTF1422 NC_008245.1 1471000 1471620 D Similar to Q87UK0 Oxidoreductase, 2OG-Fe(II) oxygenase family (244 aa). FASTA: opt: 400 Z-score: 493.2 E(): 1.3e-19 33.163 identity in 196 aa overlap ORF ftt1422; oxidoreductase 1471000..1471620 Francisella tularensis subsp. tularensis FSC198 4199776 YP_667498.1 CDS FTF1423c NC_008245.1 1471613 1472362 R Similar to Q8NQW1 Predicted permease from Corynebacterium glutamicum (250 aa). FASTA: opt: 472 Z-score: 553.4 E(): 5.6e-23 Smith-Waterman score: 472; 35.573 identity in 253 aa overlap. ORF ftt1423c; hypothetical protein complement(1471613..1472362) Francisella tularensis subsp. tularensis FSC198 4199777 YP_667499.1 CDS FTF1424c NC_008245.1 1472364 1473044 R Similar to Q89VN8 Bll1007 protein from Bradyrhizobium japonicum (345 aa). FASTA: opt: 834 Z-score: 1018.3 E(): 7.2e-49 Smith-Waterman score: 834; 53.509 identity in 228 aa overlap ORF ftt1424c; hypothetical protein complement(1472364..1473044) Francisella tularensis subsp. tularensis FSC198 4199778 YP_667500.1 CDS naoX NC_008245.1 1473089 1474783 R Similar to Q8XMF5 NADH oxidase from Clostridium perfringens (566 aa). FASTA: opt: 2055 Z-score: 2177.9 E(): 1.8e-113 57.117 identity in 548 aa overlap; NADH oxidase complement(1473089..1474783) Francisella tularensis subsp. tularensis FSC198 4200235 YP_667501.1 CDS FTF1426c NC_008245.1 1474805 1475323 R Similar to Q8YQC8 Hypothetical protein from Anabaena sp. (177 aa). FASTA: opt: 465 Z-score: 572.2 E(): 5e-24 Smith-Waterman score: 465; 43.023 identity in 172 aa overlap ORF ftt1426c; hypothetical protein complement(1474805..1475323) Francisella tularensis subsp. tularensis FSC198 4199779 YP_667502.1 CDS isftu1 NC_008245.1 1475863 1476647 D ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and also mariner elements, show that this transposase shares strongly conserved residues, including a fully conserved dipeptide,Asp-Glu (DE), and a block consisting of a fully conserved Asp and highly conserved Glu, separated by 34 or 35 residues (D35E). The conserved dipeptide is only present if ribosomal frameshifting occurs.; transposase join(1475863..1476189,1476189..1476647) Francisella tularensis subsp. tularensis FSC198 4200173 YP_667503.1 CDS FTF1428c NC_008245.1 1476808 1477323 R Similar to AAP10414 (Q81AS7) Acetyltransferase from Bacillus cereus (174 aa). FASTA: opt: 372 Z-score: 461.6 E(): 7.3e-18 Smith-Waterman score: 372; 40.341 identity in 176 aa overlap ORF ftt1428c; acetyltransferase complement(1476808..1477323) Francisella tularensis subsp. tularensis FSC198 4199780 YP_667504.1 CDS rhtC NC_008245.1 1478503 1479138 D Similar Q8DDM9 to Putative threonine efflux protein from Vibrio vulnificus (223 aa). FASTA: opt: 310 Z-score: 386.3 E(): 1.1e-13 Smith-Waterman score: 310; 29.577 identity in 213 aa overlap; threonine efflux protein 1478503..1479138 Francisella tularensis subsp. tularensis FSC198 4199212 YP_667505.1 CDS ppnK NC_008245.1 1479135 1480025 R Similar to Q89AR9 Putative inorganic polyphosphate/ATP-NAD kinase from Buchnera aphidicola (292 aa). FASTA: opt: 682 Z-score: 800.3 E(): 1e-36 Smith-Waterman score: 682; 38.776 identity in 294 aa overlap; inorganic phosphate/ATP-NAD kinase complement(1479135..1480025) Francisella tularensis subsp. tularensis FSC198 4199935 YP_667506.1 CDS gtrB NC_008245.1 1480214 1481158 D Similar to Q55487 Putative glycosyl transferase from Synechocystis sp. (318 aa). FASTA: opt: 1079 Z-score: 1283.0 E(): 1.3e-63 Smith-Waterman score: 1079; 50.000 identity in 298 aa overlap; glycosyl transferase family protein 1480214..1481158 Francisella tularensis subsp. tularensis FSC198 4200364 YP_667507.1 CDS yadH NC_008245.1 1481162 1481941 R Similar Q88LN3 ABC transporter,permease protein from Pseudomonas putida (259 aa). FASTA: opt: 890 Z-score: 979.2 E(): 1.1e-46 Smith-Waterman score: 890; 50.193 identity in 259 aa overlap; ABC transporter membrane protein complement(1481162..1481941) Francisella tularensis subsp. tularensis FSC198 4200697 YP_667508.1 CDS yagD NC_008245.1 1481950 1482873 R Similar to Q9CNG2 YagD from Pasteurella multocida (312 aa). FASTA: opt: 1028 Z-score: 1082.3 E(): 2e-52 Smith-Waterman score: 1028; 50.662 identity in 302 aa overlap; ABC transporter ATP-binding protein complement(1481950..1482873) Francisella tularensis subsp. tularensis FSC198 4200698 YP_667509.1 CDS isftu2 NC_008245.1 1483056 1483799 D ISFtu2. Transposase, member of the IS5 family. Identical to Q8GM03 putative transposase from Francisella tularensis (247 aa).; transposase 1483056..1483799 Francisella tularensis subsp. tularensis FSC198 4199295 YP_667510.1 CDS FTF1439c NC_008245.1 1485078 1485845 R Similar to Q87N28 Putative deoxyribonuclease from vibrio parahaemolyticus (255 aa). FASTA: opt: 787 Z-score: 917.1 E(): 3.1e-43 Smith-Waterman score: 787; 44.314 identity in 255 aa overlap ORF ftt1439c; deoxyribonuclease complement(1485078..1485845) Francisella tularensis subsp. tularensis FSC198 4200066 YP_667511.1 CDS FTF1441 NC_008245.1 1487511 1487996 D Similar to Q8YQ94 Hypothetical protein from Anabaena sp. (144 aa). FASTA: opt: 497 Z-score: 629.3 E(): 3.4e-27 Smith-Waterman score: 497; 54.610 identity in 141 aa overlap ORF ftt1441; hypothetical protein 1487511..1487996 Francisella tularensis subsp. tularensis FSC198 4200068 YP_667512.1 CDS rpoA2 NC_008245.1 1488614 1489570 R catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha complement(1488614..1489570) Francisella tularensis subsp. tularensis FSC198 4200327 YP_667513.1 CDS FTF1443c NC_008245.1 1489658 1490560 R Similar to Q87ZS7 ATPase, AAA family from Pseudomonas syringae (440 aa). FASTA: opt: 1018 Z-score: 1104.6 E(): 1.1e-53 Smith-Waterman score: 1096; 43.243 identity in 407 aa overlap ORF ftt1443c; recombination factor protein RarA complement(1489658..1490560) Francisella tularensis subsp. tularensis FSC198 4200069 YP_667514.1 CDS ppx NC_008245.1 1491128 1492063 R Similar to P44828 Putative exopolyphosphatase from Pneumophilus influenzae (323 aa). FASTA: opt: 730 Z-score: 856.9 E(): 7.1e-40 Smith-Waterman score: 730; 41.275 identity in 298 aa overlap; exopolyphosphatase complement(1491128..1492063) Francisella tularensis subsp. tularensis FSC198 4199936 YP_667515.1 CDS trxA1 NC_008245.1 1492252 1492575 D Similar to Q9JYY9 Thioredoxin from Neisseria meningitidis (110 aa). FASTA: opt: 452 Z-score: 595.9 E(): 2.4e-25 Smith-Waterman score: 452; 62.000 identity in 100 aa overlap; thioredoxin 1492252..1492575 Francisella tularensis subsp. tularensis FSC198 4198969 YP_667516.1 CDS rho NC_008245.1 1492618 1493880 D An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 1492618..1493880 Francisella tularensis subsp. tularensis FSC198 4199211 YP_667517.1 CDS manB NC_008245.1 1494992 1496476 R Similar to Q8UCV4 Phosphomannomutase from Agrobacterium tumefaciens (506 aa). FASTA: opt: 1226 Z-score: 1345.0 E(): 4.6e-67 Smith-Waterman score: 1226; 41.127 identity in 479 aa overlap; phosphomannomutase complement(1494992..1496476) Francisella tularensis subsp. tularensis FSC198 4199659 YP_667518.1 CDS manC NC_008245.1 1496507 1497913 R Similar to Q9ETR3 GDP-mannose pyrophosphorylase from Salmonella enterica (464 aa). FASTA: opt: 1571 Z-score: 1720.2 E(): 5.8e-88 Smith-Waterman score: 1571; 50.647 identity in 464 aa overlap; mannose-1-phosphate guanyltransferase complement(1496507..1497913) Francisella tularensis subsp. tularensis FSC198 4199660 YP_667519.1 CDS wbtM NC_008245.1 1498880 1499926 R Similar to Q9RDY1 RmlB protein from Legionella pneumophila (351 aa). FASTA: opt: 1490 Z-score: 1729.8 E(): 1.7e-88 Smith-Waterman score: 1490; 64.392 identity in 337 aa overlap; dTDP-D-glucose 4,6-dehydratase complement(1498880..1499926) Francisella tularensis subsp. tularensis FSC198 4200687 YP_667520.1 CDS wbtL NC_008245.1 1500443 1501327 R Similar to O66250 Glucose-1-phosphate-thymidylyltransferase from Actinobacillus actinomycetemcomitans (290 aa). FASTA: opt: 1336 Z-score: 1567.4 E(): 1.9e-79 Smith-Waterman score: 1336; 67.466 identity in 292 aa overlap; glucose-1-phosphate thymidylyltransferase complement(1500443..1501327) Francisella tularensis subsp. tularensis FSC198 4200152 YP_667521.1 CDS wbtK NC_008245.1 1501352 1502212 R Similar to Q8ECG2 Glycosyl transferase, group 2 family protein from Shewanella oneidensis (298 aa). FASTA: opt: 724 Z-score: 845.9 E(): 2.9e-39 Smith-Waterman score: 724; 39.789 identity in 284 aa overlap; glycosyltransferase complement(1501352..1502212) Francisella tularensis subsp. tularensis FSC198 4200151 YP_667522.1 CDS wzx NC_008245.1 1502205 1503692 R Similar to AAO39697(Q84DG4) O antigen flippase from E. coli (464 aa). FASTA: opt: 861 Z-score: 954.5 E(): 2.6e-45 Smith-Waterman score: 861; 31.343identity in 469 aa overlap; O-antigen flippase complement(1502205..1503692) Francisella tularensis subsp. tularensis FSC198 4200690 YP_667523.1 CDS wbtJ NC_008245.1 1503697 1504422 R Similar to Q50721 Hypothetical protein Rv3404c precurser from Mycobacterium tuberculosis (234 aa). FASTA: opt: 562 Z-score: 656.5 E(): 1e-28 Smith-Waterman score: 562; 43.243 identity in 185 aa overlap; hypothetical protein complement(1503697..1504422) Francisella tularensis subsp. tularensis FSC198 4200150 YP_667524.1 CDS wbtI NC_008245.1 1504419 1505501 R Similarity to Q97GL6 Sugar transaminase, involved in dTDP-4-amino-4,6-dideoxyglucose biosynthesis from Clostridium acetobutylicum (364 aa). FASTA: opt: 1344 Z-score: 1521.8 E(): 6.5e-77 Smith-Waterman score: 1344; 59.155 identity in 355 aa overlap; sugar transamine/perosamine synthetase complement(1504419..1505501) Francisella tularensis subsp. tularensis FSC198 4200149 YP_667525.1 CDS wbtH NC_008245.1 1505494 1507380 R Similar to Q8GGB6 Asparagine synthase-like protein from Pseudomonas aeruginosa (627 aa). FASTA: opt: 1855 Z-score: 2052.2 E(): 1.9e-106 Smith-Waterman score: 1855; 46.022 identity in 641 aa overlap; asparagine synthase complement(1505494..1507380) Francisella tularensis subsp. tularensis FSC198 4200148 YP_667526.1 CDS wbtG NC_008245.1 1507380 1508480 R Similar to Q8ECG6 Glycosyl transferase group 1 family protein from Shewanella oneidensis (373 aa). FASTA: opt: 531 Z-score: 625.5 E(): 5.5e-27 Smith-Waterman score: 531; 32.353 identity in 374 aa overlap; glycosyl transferase family protein complement(1507380..1508480) Francisella tularensis subsp. tularensis FSC198 4200147 YP_667527.1 CDS wzy NC_008245.1 1508477 1509706 R membrane protein/O-antigen polymerase (personal communication from authors); membrane protein/O-antigen protein complement(1508477..1509706) Francisella tularensis subsp. tularensis FSC198 4200691 YP_667528.1 CDS wbtF NC_008245.1 1509723 1510694 R Similar to Q8KN66 WbpP from Pseudomonas aeruginosa (341 aa). FASTA: opt: 1033 Z-score: 1225.7 E(): 2e-60 Smith-Waterman score: 1033; 51.562identity in 320 aa overlap; NAD dependent epimerase complement(1509723..1510694) Francisella tularensis subsp. tularensis FSC198 4200146 YP_667529.1 CDS wbtE NC_008245.1 1510694 1512004 R Similar to Q8EMC3 Vi polysaccharide biosynthesis from Oceanobacillus iheyensis (437 aa). FASTA: opt: 1817 Z-score: 2048.6 E(): 2.9e-106 Smith-Waterman score: 1817; 59.268 identity in 437 aa overlap; UDP-glucose/GDP-mannose dehydrogenase complement(1510694..1512004) Francisella tularensis subsp. tularensis FSC198 4200145 YP_667530.1 CDS wbtD NC_008245.1 1512022 1513113 R Similar to Q8EMF7 Galacturonosyl transferase from Oceanobacillus iheyensis (362 aa). FASTA: opt: 908 Z-score: 1050.2 E(): 1.2e-50 Smith-Waterman score: 908; 40.223 identity in 358 aa overlap; galacturonosyl transferase complement(1512022..1513113) Francisella tularensis subsp. tularensis FSC198 4200144 YP_667531.1 CDS wbtC NC_008245.1 1513103 1513894 R Similar to Q9K6L4 UDP-glucose 4-epimerase from Bacillus halodurans (282 aa). FASTA: opt: 758 Z-score: 904.3 E(): 1.6e-42 Smith-Waterman score: 758; 45.455 identity in 264 aa overlap; UDP-glucose 4-epimerase complement(1513103..1513894) Francisella tularensis subsp. tularensis FSC198 4200143 YP_667532.1 CDS wbtB NC_008245.1 1513896 1514513 R Similarity to Q9K6L3 Galactosyltransferase from Bacillus halodurans (207 aa). FASTA: opt: 902 Z-score: 1122.0 E(): 1.2e-54 Smith-Waterman score: 902; 66.667 identity in 195 aa overlap; galactosyl transferase complement(1513896..1514513) Francisella tularensis subsp. tularensis FSC198 4200142 YP_667533.1 CDS wbtA NC_008245.1 1514521 1516257 R Similar to Q9S4V4 PglF from Campylobacter jejuni (590 aa). FASTA: opt: 1343 Z-score: 1435.9 E(): 3.9e-72 Smith-Waterman score: 1378; 43.543identity in 604 aa overlap; dTDP-glucose 4,6-dehydratase complement(1514521..1516257) Francisella tularensis subsp. tularensis FSC198 4200141 YP_667534.1 CDS isftu2 NC_008245.1 1516359 1517102 R ISFtu2. Transposase, member of the IS5 family. Identical to Q8GM03 putative transposase from Francisella tularensis (247 aa).; transposase complement(1516359..1517102) Francisella tularensis subsp. tularensis FSC198 4199296 YP_667535.1 CDS nadB NC_008245.1 1518207 1519694 R Similar to Q8XQG4 L-aspartate oxidase 2 from Ralstonia solanacearum (536 aa). FASTA: opt: 1043 Z-score: 1161.3 E(): 7.8e-57 Smith-Waterman score: 1043; 38.008 identity in 492 aa overlap; L-aspartate oxidase complement(1518207..1519694) Francisella tularensis subsp. tularensis FSC198 4200230 YP_667536.1 CDS nadC NC_008245.1 1519697 1520560 R Similar to Q8DC25 Nicotinate-nucleotide pyrophosphorylase from Vibrio vulnificus (295 aa). FASTA: opt: 888 Z-score: 999.5 E(): 8e-48 Smith-Waterman score: 888; 53.737 identity in 281 aa overlap; nicotinate-nucleotide pyrophosphorylase complement(1519697..1520560) Francisella tularensis subsp. tularensis FSC198 4200231 YP_667537.1 CDS nadA NC_008245.1 1520569 1521594 R 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase complement(1520569..1521594) Francisella tularensis subsp. tularensis FSC198 4200117 YP_667538.1 CDS gmk NC_008245.1 1521615 1522187 R Essential for recycling GMP and indirectly, cGMP; guanylate kinase complement(1521615..1522187) Francisella tularensis subsp. tularensis FSC198 4200291 YP_667539.1 CDS deaD NC_008245.1 1522304 1524013 R Similar to DEAD_KLEPN (P33906) Cold-shock DEAD-box protein A (ATP-dependent RNA helicase deaD) from Klebsiella pneumoniae (642 aa). FASTA: opt: 1669 Z-score: 1759.9 E(): 3.5e-90 Smith-Waterman score: 1669; 45.070 identity in 568 aa overlap; cold-shock DEAD-box protein A complement(1522304..1524013) Francisella tularensis subsp. tularensis FSC198 4199531 YP_667540.1 CDS ppiC NC_008245.1 1524078 1524356 R Identical to Q9ETL6 Putative parvulin (Putative peptidyl-prolyl cis-trans isomerase) from Francisella tularensis ssp. tularensis strain SchuS4 (FSC237) (92 aa).; peptidyl-prolyl cis-trans isomerase complement(1524078..1524356) Francisella tularensis subsp. tularensis FSC198 4199934 YP_667541.1 CDS galP2 NC_008245.1 1524451 1525845 R Similar to GALP__ECOLI Galactose-proton symporter from E. coli (464 aa). FASTA: opt: 965 Z-score: 1103.1 E(): 1.4e-53 Smith-Waterman score: 965; 36.226 identity in 461 aa overlap; major facilitator superfamily galactose-proton symporter complement(1524451..1525845) Francisella tularensis subsp. tularensis FSC198 4199269 YP_667542.1 CDS galP1 NC_008245.1 1525877 1527259 R Similar to AAO70555 (Q8XEV6) Galactose-proton symport from Salmonella typhimurium (464 aa). FASTA: opt: 1295 Z-score: 1483.7 E(): 8.6e-75 Smith-Waterman score: 1295; 45.140 identity in 463 aa overlap; major facilitator superfamily galactose-proton symporter complement(1525877..1527259) Francisella tularensis subsp. tularensis FSC198 4199268 YP_667543.1 CDS galT NC_008245.1 1527350 1528375 D catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P; galactose-1-phosphate uridylyltransferase 1527350..1528375 Francisella tularensis subsp. tularensis FSC198 4199270 YP_667544.1 CDS galK NC_008245.1 1528378 1529526 D Similar to GAL1_ACTPL Galactokinase from Actinobacillus pleuropneumoniae (384 aa) FASTA: opt: 959 Z-score: 1098.0 E(): 2.6e-53 Smith-Waterman score: 959; 38.710identity in 372 aa overlap; galactokinase 1528378..1529526 Francisella tularensis subsp. tularensis FSC198 4199266 YP_667545.1 CDS FTF1477c NC_008245.1 1529523 1529918 R Similar to Q88NK0 Conserved hypothetical protein from Pseudomonas putida (139 aa). FASTA: opt: 362 Z-score: 463.4 E(): 5.9e-18 Smith-Waterman score: 362; 40.458 identity in 131 aa overlap ORF ftt1477c; hypothetical protein complement(1529523..1529918) Francisella tularensis subsp. tularensis FSC198 4200070 YP_667546.1 CDS kdsB NC_008245.1 1529911 1530663 R CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase complement(1529911..1530663) Francisella tularensis subsp. tularensis FSC198 4199507 YP_667547.1 CDS FTF1479c NC_008245.1 1530656 1530844 R Similarity to Q8DAV0 Conserved hypothetical protein from Vibrio vulnificus (59 aa). FASTA: opt: 252 Z-score: 369.5 E(): 1e-12 Smith-Waterman score: 252; 56.140 identity in 57 aa overlap ORF ftt1479c; hypothetical protein complement(1530656..1530844) Francisella tularensis subsp. tularensis FSC198 4200071 YP_667548.1 CDS FTF1480c NC_008245.1 1531229 1531408 R ORF ftt1480c; hypothetical protein complement(1531229..1531408) Francisella tularensis subsp. tularensis FSC198 4200072 YP_667549.1 CDS isftu1 NC_008245.1 1531569 1532353 R ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and also mariner elements, show that this transposase shares strongly conserved residues, including a fully conserved dipeptide,Asp-Glu (DE), and a block consisting of a fully conserved Asp and highly conserved Glu, separated by 34 or 35 residues (D35E). The conserved dipeptide is only present if ribosomal frameshifting occurs.; transposase complement(join(1531569..1532027,1532027..1532353)) Francisella tularensis subsp. tularensis FSC198 4200175 YP_667550.1 CDS lpd NC_008245.1 1532726 1534138 R Similar to AAO90013 (Q83E67) Dihydrolipoamide dehydrogenase from Coxiella burnetti (474 aa). FASTA: opt: 2052 Z-score: 2129.3 E(): 9.5e-111 Smith-Waterman score: 2052; 65.890 identity in 472 aa overlap.; dihydrolipoamide dehydrogenase complement(1532726..1534138) Francisella tularensis subsp. tularensis FSC198 4199565 YP_667551.1 CDS aceF NC_008245.1 1534152 1536047 R E2 component of pyruvate dehydrogenase multienzyme complex; in Escherichia coli AceF contains three N-terminal lipoyl domains; dihydrolipoamide acetyltransferase complement(1534152..1536047) Francisella tularensis subsp. tularensis FSC198 4199751 YP_667552.1 CDS aceE NC_008245.1 1536065 1538746 R E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 complement(1536065..1538746) Francisella tularensis subsp. tularensis FSC198 4199750 YP_667553.1 CDS FTF1486c NC_008245.1 1539046 1540182 R Similar to AAO91321 (Q83AQ3) Hypothetical protein from Coxiella burnetti (388 aa). FASTA: opt: 858 Z-score: 1007.0 E(): 3.1e-48 Smith-Waterman score: 858 38.504 identity in 361 aa overlap ORF ftt1486c; hypothetical protein complement(1539046..1540182) Francisella tularensis subsp. tularensis FSC198 4200074 YP_667554.1 CDS coaE NC_008245.1 1540310 1540924 D catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 1540310..1540924 Francisella tularensis subsp. tularensis FSC198 4200271 YP_667555.1 CDS trpS NC_008245.1 1541221 1542225 D catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 1541221..1542225 Francisella tularensis subsp. tularensis FSC198 4200723 YP_667556.1 CDS FTF1489 NC_008245.1 1542227 1542952 D ORF ftt1489; hypothetical protein 1542227..1542952 Francisella tularensis subsp. tularensis FSC198 4200075 YP_667557.1 CDS FTF1490 NC_008245.1 1542962 1544260 D Similar to Q9RZK7 NA+/H+ antiporter, putative, from Deinococcus radiodurans (422 aa). FASTA: opt: 529 Z-score: 612.1 E(): 3.1e-26 Smith-Waterman score: 771; 36.211 identity in 417 aa overlap ORF ftt1490; Na+/H+ antiporter 1542962..1544260 Francisella tularensis subsp. tularensis FSC198 4200076 YP_667558.1 CDS FTF1491c NC_008245.1 1544659 1544973 R ORF ftt1491c; hypothetical protein complement(1544659..1544973) Francisella tularensis subsp. tularensis FSC198 4200077 YP_667559.1 CDS FTF1492c NC_008245.1 1545069 1545695 R ORF ftt1492c; hypothetical protein complement(1545069..1545695) Francisella tularensis subsp. tularensis FSC198 4200078 YP_667560.1 CDS FTF1493c NC_008245.1 1546185 1546580 R ORF ftt1493c; hypothetical protein complement(1546185..1546580) Francisella tularensis subsp. tularensis FSC198 4200079 YP_667561.1 CDS murQ NC_008245.1 1546582 1547466 R catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway; N-acetylmuramic acid 6-phosphate etherase complement(1546582..1547466) Francisella tularensis subsp. tularensis FSC198 4199875 YP_667562.1 CDS FTF1495c NC_008245.1 1547463 1549427 R ORF ftt1495c; hypothetical protein complement(1547463..1549427) Francisella tularensis subsp. tularensis FSC198 4199876 YP_667563.1 CDS FTF1496c NC_008245.1 1549436 1550449 R ORF ftt1496c; hypothetical protein complement(1549436..1550449) Francisella tularensis subsp. tularensis FSC198 4199877 YP_667564.1 CDS FTF1497c NC_008245.1 1550430 1550933 R ORF ftt1497c; hypothetical protein complement(1550430..1550933) Francisella tularensis subsp. tularensis FSC198 4199878 YP_667565.1 CDS accA NC_008245.1 1550953 1551900 R catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha complement(1550953..1551900) Francisella tularensis subsp. tularensis FSC198 4199746 YP_667566.1 CDS muts NC_008245.1 1552034 1554607 D This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 1552034..1554607 Francisella tularensis subsp. tularensis FSC198 4200114 YP_667567.1 CDS secB2 NC_008245.1 1554679 1555122 D molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB 1554679..1555122 Francisella tularensis subsp. tularensis FSC198 4200735 YP_667568.1 CDS FTF1502 NC_008245.1 1556563 1557780 D Similar to AAP17334 (TRYP_ECOLI) Tyrosine-specific transport protein from E. coli (403 aa). FASTA: opt: 741 Z-score: 839.5 E(): 6.5e-39 Smith-Waterman score: 741; 32.663identity in 398 aa overlap ORF ftt1502; aromatic amino acid HAAP transporter 1556563..1557780 Francisella tularensis subsp. tularensis FSC198 4199880 YP_667569.1 CDS xerC NC_008245.1 1557790 1558668 D Similar to Q88B11 Integrase/recombinase XerC from Pseudomonas syringae (295 aa). FASTA: opt: 790 Z-score: 939.6 E(): 1.7e-44 Smith-Waterman score: 790; 42.177 identity in 294 aa overlap.; integrase/recombinase XerC 1557790..1558668 Francisella tularensis subsp. tularensis FSC198 4200693 YP_667570.1 CDS FTF1504 NC_008245.1 1558668 1559393 D Similar to YHIQ_NEIGO P72077 Hypothetical 27.3kDa protein from Neisseria gonorrhoeae (254 aa). FASTA: opt: 350 Z-score: 423.8 E(): 9.3e-16 Smith-Waterman score: 350; 36.073 identity in 219 aa overlap. ORF ftt1504; hypothetical protein 1558668..1559393 Francisella tularensis subsp. tularensis FSC198 4199881 YP_667571.1 CDS FTF1505c NC_008245.1 1559400 1560014 R ORF ftt1505c; hypothetical protein complement(1559400..1560014) Francisella tularensis subsp. tularensis FSC198 4199882 YP_667572.1 CDS FTF1506 NC_008245.1 1560102 1560680 D ORF ftt1506; hypothetical protein 1560102..1560680 Francisella tularensis subsp. tularensis FSC198 4199883 YP_667573.1 CDS FTF1507 NC_008245.1 1560757 1561389 D ORF ftt1507; hypothetical protein 1560757..1561389 Francisella tularensis subsp. tularensis FSC198 4199884 YP_667574.1 CDS relA NC_008245.1 1561505 1563448 R Similar to Q8EBQ4 GTP pyrophosphokinase from Shewenella oneidensis (735 aa). FASTA: opt: 1566 Z-score: 1723.7 E(): 3.7e-88 Smith-Waterman score: 1639; 39.744 identity in 624 aa overlap; GTP pyrophosphokinase complement(1561505..1563448) Francisella tularensis subsp. tularensis FSC198 4200609 YP_667575.1 CDS FTF1509c NC_008245.1 1563817 1564173 R ORF ftt1509c; hypothetical protein complement(1563817..1564173) Francisella tularensis subsp. tularensis FSC198 4199885 YP_667576.1 CDS FTF1510c NC_008245.1 1564207 1565403 R Similar to Q8DAB5 Tyrosine-specific transport protein from Vibrio vulnificus (401 aa). FASTA: opt: 804 Z-score: 930.6 E(): 5.5e-44 Smith-Waterman score: 804; 35.309 identity in 405 aa overlap ORF ftt1510; aromatic amino acid HAAP transporter complement(1564207..1565403) Francisella tularensis subsp. tularensis FSC198 4199886 YP_667577.1 CDS FTF1511 NC_008245.1 1565594 1566478 D Similar to AAO90839 Membrane protein, putative from Coxiella burnetii (305 aa). FASTA: opt: 693 Z-score: 824.9 E(): 4.3e-38 Smith-Waterman score: 693; 38.776 identity in 294 aa overlap. ORF ftt1511; hypothetical protein 1565594..1566478 Francisella tularensis subsp. tularensis FSC198 4199887 YP_667578.1 CDS dnaJ2 NC_008245.1 1566468 1567394 R Similar to CAD85066 (Q82VD9) DnaJ N-terminal domain:DnaJ C terminal domain from Nitrosomonas europaea (314 aa). FASTA opt: 800 Z-score: 823.9 E(): 4.8e-38 39.482 identity in 309 aa overlap.; heat shock protein, hsp40 complement(1566468..1567394) Francisella tularensis subsp. tularensis FSC198 4199355 YP_667579.1 CDS FTF1514c NC_008245.1 1568324 1568695 R ORF ftt1514c; hypothetical protein complement(1568324..1568695) Francisella tularensis subsp. tularensis FSC198 4199889 YP_667580.1 CDS FTF1515c NC_008245.1 1568703 1569302 R Similar to Q8XMV7 Hypothetical protein CPE0581 from Clostridium perfrigens (195 aa). FASTA: opt: 348 Z-score: 432.5 E(): 3.1e-16 Smith-Waterman score: 348; 33.333 identity in 189 aa overlap. FTF1563 is more likely to be phosphatidylcoline synthase. ORF ftt1515c; hypothetical protein complement(1568703..1569302) Francisella tularensis subsp. tularensis FSC198 4199890 YP_667581.1 CDS FTF1517c NC_008245.1 1570720 1571439 R Similar to Q92KR0 hypothetical transmembrane protein from Rhizobium meliloti (266aa). FASTA: opt: 566 Z-score: 664.8 E(): 3.5e-29 Smith-Waterman score: 566; 40.090 identity in 222 aa overlap. ORF ftt1517c; hypothetical protein complement(1570720..1571439) Francisella tularensis subsp. tularensis FSC198 4199891 YP_667582.1 CDS ogt NC_008245.1 1571469 1572041 D Similar to Q8A7W3 methylated-DNA--protein-cysteine methyltransferase from Bacteroides thetaiotaomicron (181aa). FASTA: opt: 443 Z-score: 536.8 bits: 106.7 E(): 4.8e-22 Smith-Waterman score: 443; 44.375 identity in 160 aa overlap. ogt in E.coli is a bifunctional protein containing an autotranscriptional activator at its carboxy domain and a methylated-DNA--protein-cysteine methyltransferase (MGMT) domain at its carboxy terminus. In Bacillus subtilis these two functions are independent and are referred to as adaA and adaB respectively; methylated-DNA--protein-cysteine methyltransferase 1571469..1572041 Francisella tularensis subsp. tularensis FSC198 4200760 YP_667583.1 CDS gabP NC_008245.1 1572525 1573862 R Similar to Q8A4M6 glutamate/gamma-aminobutyrate anti-porter from Bacteroides thetaiotaomicron. FASTA: opt: 911 Z-score: 1001.3 E(): 6.4e-48 Smith-Waterman score: 911; 31.696identity in 448 aa overlap.; glutamate/gamma-aminobutyrate anti-porter complement(1572525..1573862) Francisella tularensis subsp. tularensis FSC198 4199206 YP_667584.1 CDS FTF1522c NC_008245.1 1575113 1575703 R Similar to Q8P4A2, hypothetical protein XCC3808 from Xanthamonas campestris (258aa). FASTA: opt:421 Z-score: 521.1 E(): 3.6e-21 Smith-Waterman score: 421; 34.536 identity in 194 aa overlap ORF ftt1522c; hypothetical protein complement(1575113..1575703) Francisella tularensis subsp. tularensis FSC198 4199893 YP_667585.1 CDS isftu2 NC_008245.1 1576072 1576815 R ISFtu2. Transposase, member of the IS5 family. Identical to Q8GM03 putative transposase from Francisella tularensis (247 aa).; transposase complement(1576072..1576815) Francisella tularensis subsp. tularensis FSC198 4199297 YP_667586.1 CDS hrpA NC_008245.1 1577297 1581565 R Similar to Q8ZE61 ATP-dependent helicase from Yersinia pestis (1280 aa). FASTA: opt: 2018 Z-score: 2071.8 E(): 1.5e-107 Smith-Waterman score: 2974; 38.714 identity in 1400 aa overlap; ATp-dependent helicase complement(1577297..1581565) Francisella tularensis subsp. tularensis FSC198 4200201 YP_667587.1 CDS FTF1525c NC_008245.1 1581589 1582476 R ORF ftt1525c; hypothetical protein complement(1581589..1582476) Francisella tularensis subsp. tularensis FSC198 4200118 YP_667588.1 CDS idh NC_008245.1 1582490 1584733 R Similar to Q8EDW2 Isocitrate dehydrogenase,NADP-dependent from Shewanella oneidensis (741 aa). FASTA: opt: 3146 Z-score: 3332.9 E(): 8.6e-178 65.574identity in 732 aa overlap; isocitrate dehydrogenase complement(1582490..1584733) Francisella tularensis subsp. tularensis FSC198 4200652 YP_667589.1 CDS arsC2 NC_008245.1 1584737 1585102 R Similar to Q87MH6 Arsenate reductase from Vibrio parahaemolyticus (116 aa). FASTA: opt: 287 Z-score: 374.9 E(): 5e-13 Smith-Waterman score: 287; 38.739 identity in 111 aa overlap; arsenate reductase complement(1584737..1585102) Francisella tularensis subsp. tularensis FSC198 4199687 YP_667590.1 CDS fadD2 NC_008245.1 1585318 1587006 D Similar to Q8EE09 Long-chain-fatty-acid--CoA ligase from Shewanella oneidensis (557 aa). FASTA: opt: 1556 Z-score: 1747.3 E(): 1.8e-89 Smith-Waterman score: 1556; 42.908identity in 557 aa overlap; long chain fatty acid CoA ligase 1585318..1587006 Francisella tularensis subsp. tularensis FSC198 4199403 YP_667591.2 CDS fadE NC_008245.1 1587044 1589284 D functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; acyl-CoA dehydrogenase 1587044..1589284 Francisella tularensis subsp. tularensis FSC198 4199404 YP_667592.1 CDS fadB/acbP NC_008245.1 1589357 1592053 D N-terminal (85 aa) similar to CBP_YEAST (P31787) Acyl-CoA-binding protein (ACBP) from Saccharomyces cerevisiae (86 aa). FASTA opt: 206 Z-score: 281.8 E(): 7.6e-08 Smith-Waterman score: 206; 44.444identity in 72 aa overlap. C-terminus (110-898) similar to Q8P986 3-hydroxacyl-CoA dehydrogenase from Xanthomonas campestris (790 aa). FASTA: opt: 2495 Z-score: 2747.5 E(): 3.5e-145 Smith-Waterman score: 2495;48.228 identity in 790 aa overlap No match to first 110 aa with Q8P986 or any other 3-hydroxacyl-CoA dehydrogenase. Acyl-CoA-binding protein has only been described in eukaryotes unknown EC_number 5.2.2.3; bifunctional 3-hydroxacyl-CoA dehydrogenase/acyl-CoA-binding protein 1589357..1592053 Francisella tularensis subsp. tularensis FSC198 4199401 YP_667593.1 CDS fadA NC_008245.1 1592066 1593253 D Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 1592066..1593253 Francisella tularensis subsp. tularensis FSC198 4199684 YP_667594.1 CDS FTF1532 NC_008245.1 1593315 1593803 D Similar to Q8ABB1 Conserved hypothetical protein from Bacteriodes thetaiotaomicron (163 aa). FASTA: opt: 237 Z-score: 310.7 E(): 1.9e-09 Smith-Waterman score: 237; 27.097 identity in 155 aa overlap ORF ftt1532; hypothetical protein 1593315..1593803 Francisella tularensis subsp. tularensis FSC198 4200119 YP_667595.1 CDS FTF1534c NC_008245.1 1595463 1596878 R Similar to Q8P596 Pre-B cell enhancing factor related protein from Xanthomonas campestris (468 aa). FASTA: opt: 1453 Z-score: 1660.8 E(): 1.2e-84 Smith-Waterman score: 1453; 49.260 identity in 473 aa overlap ORF ftt1534c; putative nicotinate phosphoribosyltransferase complement(1595463..1596878) Francisella tularensis subsp. tularensis FSC198 4200121 YP_667596.1 CDS FTF1536c NC_008245.1 1598221 1599135 R Similar to Q8RGP8 Hypothetical protein from Mycoplasma penetrans (310 aa). FASTA: opt: 805 Z-score: 956.1 E(): 2.1e-45 Smith-Waterman score: 805; 42.308 identity in 312 aa overlap ORF ftt1536c; hypothetical protein complement(1598221..1599135) Francisella tularensis subsp. tularensis FSC198 4200123 YP_667597.1 CDS FTF1537c NC_008245.1 1599275 1600669 R Similar to Q8DAW7 Conserved hypothetical protein from Vibrio vulnificus (448 aa). FASTA: opt: 455 Z-score: 511.9 E(): 1.2e-20 Smith-Waterman score: 520; 26.539 identity in 471 aa overlap ORF ftt1537c; hypothetical protein complement(1599275..1600669) Francisella tularensis subsp. tularensis FSC198 4200124 YP_667598.1 CDS FTF1538c NC_008245.1 1600675 1601658 R ORF ftt1538c; hypothetical protein complement(1600675..1601658) Francisella tularensis subsp. tularensis FSC198 4200125 YP_667599.1 CDS FTF1539c NC_008245.1 1601669 1603099 R Similar to Q9PJ34 Putative periplasmic protein from Campylobacter jejuni (445 aa). FASTA: opt: 520 Z-score: 539.8 E(): 3.2e-22 Smith-Waterman score: 530; 27.673 identity in 477 aa overlap ORF ftt1539c; hypothetical protein complement(1601669..1603099) Francisella tularensis subsp. tularensis FSC198 4200126 YP_667600.1 CDS FTF1540c NC_008245.1 1603156 1603764 R Similar to Q8EHZ4 Conserved hypothetical protein from Shewanella oneidensis (197 aa). FASTA: opt: 542 Z-score: 654.0 E(): 1.4e-28 Smith-Waterman score: 542; 41.584 identity in 202 aa overlap ORF ftt1540c; hypothetical protein complement(1603156..1603764) Francisella tularensis subsp. tularensis FSC198 4200127 YP_667601.1 CDS FTF1541c NC_008245.1 1603967 1604341 R ORF ftt1541c; hypothetical protein complement(1603967..1604341) Francisella tularensis subsp. tularensis FSC198 4200128 YP_667602.1 CDS omp26 NC_008245.1 1604459 1604995 R Similar to Q57483 Outer membrane protein 26 precursor (197 aa). FASTA: opt: 139 Z-score: 159.9 E(): 0.47 Smith-Waterman score: 139; 25.641 identity in 195 aa overlap; hypothetical protein complement(1604459..1604995) Francisella tularensis subsp. tularensis FSC198 4200763 YP_667603.1 CDS FTF1543 NC_008245.1 1605138 1605827 D Similar to Q8UGQ7 Two component response regulator from Agrobacterium tumefaciens (252 aa). FASTA: opt: 684 Z-score: 819.7 E(): 8.4e-38 Smith-Waterman score: 684; 45.333 identity in 225 aa overlap ORF ftt1543; two component response regulator 1605138..1605827 Francisella tularensis subsp. tularensis FSC198 4200129 YP_667604.1 CDS isftu1 NC_008245.1 1609635 1610419 D ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and also mariner elements, show that this transposase shares strongly conserved residues, including a fully conserved dipeptide,Asp-Glu (DE), and a block consisting of a fully conserved Asp and highly conserved Glu, separated by 34 or 35 residues (D35E). The conserved dipeptide is only present if ribosomal frameshifting occurs.; transposase join(1609635..1609961,1609961..1610419) Francisella tularensis subsp. tularensis FSC198 4200176 YP_667605.1 CDS FTF1549 NC_008245.1 1611130 1611585 D ORF ftt1549; hypothetical protein 1611130..1611585 Francisella tularensis subsp. tularensis FSC198 4200044 YP_667606.1 CDS FTF1550 NC_008245.1 1611679 1612221 D Similar to Q8EBW9 Conserved hypothetical protein (183 aa). FASTA: opt: 505 Z-score: 618.4 E(): 1.4e-26 Smith-Waterman score: 505; 40.237identity in 169 aa overlap ORF ftt1550; hypothetical protein 1611679..1612221 Francisella tularensis subsp. tularensis FSC198 4200045 YP_667607.1 CDS FTF1551 NC_008245.1 1612223 1612966 D Similar to Q888B1 Oxidoreductase,short chain dehydrogenase from Pseudomonas syringae (262 aa). FASTA: opt: 390 Z-score: 468.5 E(): 3e-18 Smith-Waterman score: 445; 32.143 identity in 252 aa overlap ORF ftt1551; oxidoreductase 1612223..1612966 Francisella tularensis subsp. tularensis FSC198 4200046 YP_667608.1 CDS ole1 NC_008245.1 1612980 1613807 D Similar to Q8PMP8 Delta 9 acyl-lipid fatty acid desaturase from Xanthomonas axonopodis (298 aa). FASTA: opt: 851 Z-score: 1027.5 E(): 2.2e-49 Smith-Waterman score: 851; 45.149identity in 268 aa overlap; Delta 9 acyl-lipid fatty acid desaturase 1612980..1613807 Francisella tularensis subsp. tularensis FSC198 4200761 YP_667609.1 CDS rnr NC_008245.1 1613831 1616128 R Similar to Q8EAG7 Ribonuclease R from (808 aa). FASTA: opt: 1840 Z-score: 1989.4 E(): 5.9e-103 Smith-Waterman score: 1863; 41.602 identity in 774 aa overlap; ribonuclease R complement(1613831..1616128) Francisella tularensis subsp. tularensis FSC198 4200769 YP_667610.1 CDS truB NC_008245.1 1616121 1617029 R catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B complement(1616121..1617029) Francisella tularensis subsp. tularensis FSC198 4200725 YP_667611.1 CDS rnc NC_008245.1 1617016 1617708 R cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III complement(1617016..1617708) Francisella tularensis subsp. tularensis FSC198 4199225 YP_667612.1 CDS lepB NC_008245.1 1617715 1618578 R Similar to AAO90612 9 83CL5) Signal peptidase I from Coxiella burnetii (259 aa). FASTA: opt: 716 Z-score: 839.6 E(): 6.5e-39 Smith-Waterman score: 717; 39.416 identity in 274 aa overlap; signal peptidase I complement(1617715..1618578) Francisella tularensis subsp. tularensis FSC198 4199512 YP_667613.1 CDS FTF1557c NC_008245.1 1618583 1619269 R Similar to AAO90736 DNA-binding response regulator from Coxiella burnetii (223 aa). FASTA: opt: 669 Z-score: 771.7 E(): 3.9e-35 Smith-Waterman score: 669; 45.778 identity in 225 aa overlap ORF ftt1557c; two-component response regulator complement(1618583..1619269) Francisella tularensis subsp. tularensis FSC198 4200047 YP_667614.1 CDS proC NC_008245.1 1621046 1621870 R Similar to Q87LJ5 Pyrroline-5-carboxylate reductase from Vibrio parahaemolyticus (272 aa). FASTA: opt: 656 Z-score: 770.0 E(): 4.9e-35 Smith-Waterman score: 656; 39.925identity in 268 aa overlap; pyrroline-5-carboxylate reductase complement(1621046..1621870) Francisella tularensis subsp. tularensis FSC198 4199943 YP_667615.1 CDS FTF1560 NC_008245.1 1621977 1622555 D HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; putative deoxyribonucleotide triphosphate pyrophosphatase 1621977..1622555 Francisella tularensis subsp. tularensis FSC198 4200049 YP_667616.1 CDS kdtA NC_008245.1 1622660 1623955 D Similar to Q87VF9 3-deoxy-D-manno-octulosonic-acid transferase from Pseudomonas syringae (447 aa). FASTA: opt: 1099 Z-score: 1251.3 E(): 7.6e-62 Smith-Waterman score: 1099; 40.143 identity in 421 aa overlap; 3-deoxy-D-manno-octulosonic-acid transferase 1622660..1623955 Francisella tularensis subsp. tularensis FSC198 4199509 YP_667617.1 CDS ispA NC_008245.1 1623952 1624833 D Similar to P45204 Geranyltranstransferase from Haemophilus influenzae (295 aa). FASTA: opt: 728 Z-score: 859.4 E(): 5.1e-40 Smith-Waterman score: 728; 43.972 identity in 282 aa overlap; geranyltranstransferase 1623952..1624833 Francisella tularensis subsp. tularensis FSC198 4199298 YP_667618.1 CDS pcs NC_008245.1 1624881 1625645 D Similar to O51265 Phosphatidyltransferase from Borrelia burgdorferi (234 aa). FASTA: opt: 438 Z-score: 531.7 E(): 9.1e-22 Smith-Waterman score: 496; 35.743 identity in 249 aa overlap; phosphatidylcholine synthase 1624881..1625645 Francisella tularensis subsp. tularensis FSC198 4199229 YP_667619.1 CDS FTF1564 NC_008245.1 1625715 1626524 D Similar to Q9I6Z1 Hypothetical protein PA0141 from Pseudomonas aeruginosa (298 aa). FASTA: opt: 1210 Z-score: 1427.9 E(): 1.1e-71 Smith-Waterman score: 1210; 62.738 identity in 263 aa overlap ORF ftt1564; hypothetical protein 1625715..1626524 Francisella tularensis subsp. tularensis FSC198 4200050 YP_667620.1 CDS FTF1566c NC_008245.1 1628345 1628641 R ORF ftt1566c; hypothetical protein complement(1628345..1628641) Francisella tularensis subsp. tularensis FSC198 4200052 YP_667621.1 CDS FTF1567c NC_008245.1 1628812 1629399 R ORF ftt1567c; hypothetical protein complement(1628812..1629399) Francisella tularensis subsp. tularensis FSC198 4200053 YP_667622.1 CDS lpxB NC_008245.1 1629458 1630600 R catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase complement(1629458..1630600) Francisella tularensis subsp. tularensis FSC198 4199570 YP_667623.1 CDS lpxA NC_008245.1 1630600 1631379 R catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase complement(1630600..1631379) Francisella tularensis subsp. tularensis FSC198 4199569 YP_667624.1 CDS fabZ NC_008245.1 1631382 1631873 R in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase complement(1631382..1631873) Francisella tularensis subsp. tularensis FSC198 4199683 YP_667625.1 CDS lpxD NC_008245.1 1631888 1632901 R adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase complement(1631888..1632901) Francisella tularensis subsp. tularensis FSC198 4199572 YP_667626.1 CDS ompH NC_008245.1 1632920 1633423 R Similar to OMPH_YEREN Cationic 19 kDa outer membrane protein from Yersinia enterocolitica (169 aa). FASTA: opt: 245 Z-score: 251.8 E(): 3.6e-06 Smith-Waterman score: 245; 28.000 identity in 150 aa overlap; outer membrane protein OmpH complement(1632920..1633423) Francisella tularensis subsp. tularensis FSC198 4200080 YP_667627.1 CDS FTF1573c NC_008245.1 1633559 1635937 R Similar to Q88MH2 Outer membrane protein,bacterial surface antigen family from Pseudomonas putida (786 aa). FASTA: opt: 1561 Z-score: 1675.2 E(): 1.9e-85 Smith-Waterman score: 1561; 32.959 identity in 801 aa overlap ORF ftt1573c; outer membrane protein complement(1633559..1635937) Francisella tularensis subsp. tularensis FSC198 4200054 YP_667628.1 CDS dxr NC_008245.1 1635943 1637100 R catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase complement(1635943..1637100) Francisella tularensis subsp. tularensis FSC198 4199667 YP_667629.1 CDS gyrA NC_008245.1 1637106 1639712 R Similar to GYRA_SALTY (P37411) DNA gyrase subunit A from Salmonella typhimurium (878 aa). FASTA: opt: 3442 Z-score: 3640.6 E(): 6.3e-195 Smith-Waterman score: 3442; 60.665 identity in 872 aa overlap; DNA gyrase subunit A complement(1637106..1639712) Francisella tularensis subsp. tularensis FSC198 4200367 YP_667630.1 CDS FTF1576 NC_008245.1 1639971 1640516 D ORF ftt1576; hypothetical protein 1639971..1640516 Francisella tularensis subsp. tularensis FSC198 4200055 YP_667631.1 CDS FTF1577 NC_008245.1 1640552 1641637 D ORF ftt1577; hypothetical protein 1640552..1641637 Francisella tularensis subsp. tularensis FSC198 4200056 YP_667632.1 CDS ung NC_008245.1 1641672 1642334 R Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase complement(1641672..1642334) Francisella tularensis subsp. tularensis FSC198 4198983 YP_667633.1 CDS FTF1579c NC_008245.1 1642331 1645204 R Similar to O25314 Type III restriction enzyme R protein from Helicobacter pylori (1001 aa). FASTA: opt: 1491 Z-score: 1485.7 E(): 6.6e-75 Smith-Waterman score: 2480; 42.828 identity in 990 aa overlap ORF ftt1579c; Type III restriction enzyme complement(1642331..1645204) Francisella tularensis subsp. tularensis FSC198 4200057 YP_667634.1 CDS FTF1580c NC_008245.1 1645441 1645971 R Identical to AAP83333 Hypothetical protein from Francisella tularensis ssp. tularensis strain SchuS4 (FSC237) (176 aa). ORF ftt1580c; hypothetical protein complement(1645441..1645971) Francisella tularensis subsp. tularensis FSC198 4200058 YP_667635.1 CDS FTF1581c NC_008245.1 1646040 1646324 R Similar to Q8DE33 Predicted endonuclease from Vibrio vulnificus (94 aa). FASTA: opt: 387 Z-score: 525.2 E(): 2.1e-21 Smith-Waterman score: 387; 61.798identity in 89 aa overlap ORF ftt1581c; endonuclease complement(1646040..1646324) Francisella tularensis subsp. tularensis FSC198 4200059 YP_667636.1 CDS isftu1 NC_008245.1 1648680 1649464 R ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and also mariner elements, show that this transposase shares strongly conserved residues, including a fully conserved dipeptide,Asp-Glu (DE), and a block consisting of a fully conserved Asp and highly conserved Glu, separated by 34 or 35 residues (D35E). The conserved dipeptide is only present if ribosomal frameshifting occurs.; transposase complement(join(1648680..1649138,1649138..1649464)) Francisella tularensis subsp. tularensis FSC198 4200177 YP_667637.1 CDS FTF1585 NC_008245.1 1649546 1649710 D ORF ftt1585; hypothetical protein 1649546..1649710 Francisella tularensis subsp. tularensis FSC198 4199705 YP_667638.1 CDS FTF1586c NC_008245.1 1649724 1650005 R ORF ftt1586c; hypothetical protein complement(1649724..1650005) Francisella tularensis subsp. tularensis FSC198 4199706 YP_667639.1 CDS FTF1589c NC_008245.1 1651886 1652629 R ORF ftt1589c; hypothetical protein complement(1651886..1652629) Francisella tularensis subsp. tularensis FSC198 4199709 YP_667640.1 CDS ubiG NC_008245.1 1652632 1653327 R Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase complement(1652632..1653327) Francisella tularensis subsp. tularensis FSC198 4198979 YP_667641.1 CDS FTF1591 NC_008245.1 1653430 1654569 D Similar to Q9Z674 Lipoprotein from Zymomonas mobilis (256 aa). FASTA: opt: 352 Z-score: 404.8 E(): 1.1e-14 Smith-Waterman score: 352; 31.739 identity in 230 aa overlap ORF ftt1591; lipoprotein 1653430..1654569 Francisella tularensis subsp. tularensis FSC198 4199710 YP_667642.1 CDS FTF1594 NC_008245.1 1658492 1659484 D Similar to Q8D7C4 Transcriptional regulator from Vibrio vulnificus (301 aa). FASTA: opt: 364 Z-score: 428.7 E(): 5e-16 Smith-Waterman score: 364; 33.010 identity in 206 aa overlap ORF ftt1594; LysR family transcriptional regulator 1658492..1659484 Francisella tularensis subsp. tularensis FSC198 4199713 YP_667643.1 CDS FTF1595 NC_008245.1 1659725 1659880 D ORF ftt1595; hypothetical protein 1659725..1659880 Francisella tularensis subsp. tularensis FSC198 4199714 YP_667644.1 CDS FTF1596 NC_008245.1 1660053 1660451 D ORF ftt1596; hypothetical protein 1660053..1660451 Francisella tularensis subsp. tularensis FSC198 4199715 YP_667645.1 CDS FTF1597 NC_008245.1 1660518 1661975 D ORF ftt1597; hypothetical protein 1660518..1661975 Francisella tularensis subsp. tularensis FSC198 4199716 YP_667646.1 CDS FTF1598 NC_008245.1 1662039 1664873 D This CDS is disrupted by the insertion of an ISFtu1 element occurring very near the C-terminal end. It is not clear whether this insertion affects the function of the protein. ORF ftt1598; hypothetical protein 1662039..1664873 Francisella tularensis subsp. tularensis FSC198 4199717 YP_667647.1 CDS isftu1 NC_008245.1 1664970 1665754 R ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and also mariner elements, show that this transposase shares strongly conserved residues, including a fully conserved dipeptide,Asp-Glu (DE), and a block consisting of a fully conserved Asp and highly conserved Glu, separated by 34 or 35 residues (D35E). The conserved dipeptide is only present if ribosomal frameshifting occurs.; transposase complement(join(1664970..1665428,1665428..1665754)) Francisella tularensis subsp. tularensis FSC198 4200178 YP_667648.1 CDS fumA NC_008245.1 1666239 1667753 R Similar to Q87NJ5 Fumarate hydratase, class I from Vibrio parahaemolyticus (505 aa). FASTA: opt: 2398 Z-score: 2635.2 E(): 6.3e-139 Smith-Waterman score: 2398; 69.384 identity in 503 aa overlap; fumerate hydratase complement(1666239..1667753) Francisella tularensis subsp. tularensis FSC198 4199200 YP_667649.1 CDS recG NC_008245.1 1668508 1670547 R Similar to Q88C73 ATP-dependent DNA helicase RecG from Pseudomonas putida (692 aa). FASTA: opt: 1698 Z-score: 1867.5 E(): 3.6e-96 Smith-Waterman score: 1698; 41.314 identity in 685 aa overlap; ATP-dependent DNA helicase RecG complement(1668508..1670547) Francisella tularensis subsp. tularensis FSC198 4200604 YP_667650.1 CDS FTF1602 NC_008245.1 1670677 1671021 D ORF ftt1602; hypothetical protein 1670677..1671021 Francisella tularensis subsp. tularensis FSC198 4199718 YP_667651.1 CDS rpmB NC_008245.1 1671155 1671391 D required for 70S ribosome assembly; 50S ribosomal protein L28 1671155..1671391 Francisella tularensis subsp. tularensis FSC198 4199003 YP_667652.1 CDS rpmG NC_008245.1 1671418 1671573 D in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 1671418..1671573 Francisella tularensis subsp. tularensis FSC198 4199007 YP_667653.1 CDS minC NC_008245.1 1671608 1672294 D Similar to Q87RC3 Septum site-determining protein MinC from Vibrio parahaemolyticus (220 aa). FASTA: opt: 444 Z-score: 518.9 E(): 4.7e-21 Smith-Waterman score: 444; 39.196 identity in 199 aa overlap; septum site-determining protein MinC 1671608..1672294 Francisella tularensis subsp. tularensis FSC198 4199846 YP_667654.1 CDS minD NC_008245.1 1672334 1673158 D Similar to Q8FWX1 Septum site-determining protein MinD from Brucella suis(271 aa). FASTA: opt: 1091 Z-score: 1181.8 E(): 5.6e-58 Smith-Waterman score: 1091; 62.825 identity in 269 aa overlap; septum site-determining protein MinD 1672334..1673158 Francisella tularensis subsp. tularensis FSC198 4199847 YP_667655.1 CDS minE NC_008245.1 1673161 1673433 D works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE 1673161..1673433 Francisella tularensis subsp. tularensis FSC198 4199848 YP_667656.1 CDS FTF1608 NC_008245.1 1673447 1674250 D Similar to YRBF_HAEIN Probable ABC transporter ATP-binding protein HI1087 from Haemophilus influenzae (264 aa). FASTA: opt: 861 Z-score: 970.8 E(): 3.2e-46 Smith-Waterman score: 861; 50.958identity in 261 aa overlap Equivalent to yrbF of yrb operon in E.coli ORF ftt1608; ABC transporter ATP-binding protein 1673447..1674250 Francisella tularensis subsp. tularensis FSC198 4199719 YP_667657.1 CDS FTF1609 NC_008245.1 1674254 1675018 D Similar Q8VUQ9 Toluene resistance protein Trg1 from Pseudomonas putida (265 aa). FASTA: opt: 793 Z-score: 934.5 E(): 3.4e-44 Smith-Waterman score: 793; 55.869 identity in 213 aa overlap Equivalent to yrbE of yrb operon in E.coli ORF ftt1609; ABC transporter membrane protein 1674254..1675018 Francisella tularensis subsp. tularensis FSC198 4199720 YP_667658.1 CDS FTF1610 NC_008245.1 1675018 1675551 D Similar to YRBD_HAEIN P45029 Hypothetical protein HI1085 from Haemophilus influenzae (167 aa). FASTA: opt: 256 Z-score: 320.6 E(): 5.3e-10 Smith-Waterman score: 281; 37.640identity in 178 aa overlap. Equivalent to yrbD of yrb operon in E.coli ORF ftt1610; hypothetical protein 1675018..1675551 Francisella tularensis subsp. tularensis FSC198 4199721 YP_667659.1 CDS FTF1611 NC_008245.1 1675619 1676287 D Similar to YRBC_ECOLI Protein yrbC precursor from E. coli (211 aa). FASTA: opt: 230 Z-score: 278.3 E(): 1.2e-07 Smith-Waterman score: 230; 26.147 identity in 218 aa overlap Equivalent to yrbC of yrb operon in E.coli ORF ftt1611; hypothetical protein 1675619..1676287 Francisella tularensis subsp. tularensis FSC198 4199722 YP_667660.1 CDS FTF1612 NC_008245.1 1676287 1676580 D Similar to YRBB_ECOLI Hypothetical protein yrbB from E. coli (97 aa). FASTA: opt: 116 Z-score: 165.8 E(): 0.22 Smith-Waterman score: 116; 31.915identity in 47 aa overlap Equivalent to yrbB of yrb operon in E.coli ORF ftt1612; hypothetical protein 1676287..1676580 Francisella tularensis subsp. tularensis FSC198 4199723 YP_667661.1 CDS FTF1613 NC_008245.1 1676597 1676833 D Similar to Q8ZB55 BolA-like protein from Yersinia pestis (87 aa). FASTA: opt: 163 Z-score: 236.9 E(): 2.4e-05 Smith-Waterman score: 163; 35.526 identity in 76 aa overlap Equivalent to yrbA of yrb operon in E.coli ORF ftt1613; BolA-like protein 1676597..1676833 Francisella tularensis subsp. tularensis FSC198 4199247 YP_667662.1 CDS FTF1614c NC_008245.1 1677113 1677796 R ORF ftt1614c; hypothetical protein complement(1677113..1677796) Francisella tularensis subsp. tularensis FSC198 4199248 YP_667663.1 CDS isftu1 NC_008245.1 1678030 1678814 D ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and also mariner elements, show that this transposase shares strongly conserved residues, including a fully conserved dipeptide,Asp-Glu (DE), and a block consisting of a fully conserved Asp and highly conserved Glu, separated by 34 or 35 residues (D35E). The conserved dipeptide is only present if ribosomal frameshifting occurs.; transposase join(1678030..1678356,1678356..1678814) Francisella tularensis subsp. tularensis FSC198 4200179 YP_667664.1 CDS cysS NC_008245.1 1679286 1680680 D catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 1679286..1680680 Francisella tularensis subsp. tularensis FSC198 4199523 YP_667665.1 CDS hemK NC_008245.1 1680684 1681628 D involved in methylation of ribosomal protein L3; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 1680684..1681628 Francisella tularensis subsp. tularensis FSC198 4200377 YP_667666.1 CDS isftu1 NC_008245.1 1683279 1684063 D ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and also mariner elements, show that this transposase shares strongly conserved residues, including a fully conserved dipeptide,Asp-Glu (DE), and a block consisting of a fully conserved Asp and highly conserved Glu, separated by 34 or 35 residues (D35E). The conserved dipeptide is only present if ribosomal frameshifting occurs.; transposase join(1683279..1683605,1683605..1684063) Francisella tularensis subsp. tularensis FSC198 4200180 YP_667667.1 CDS FTF1621c NC_008245.1 1684472 1685323 R ORF ftt1621c; hypothetical protein complement(1684472..1685323) Francisella tularensis subsp. tularensis FSC198 4199251 YP_667668.1 CDS FTF1622c NC_008245.1 1685336 1686256 R ORF ftt1622c; hypothetical protein complement(1685336..1686256) Francisella tularensis subsp. tularensis FSC198 4199252 YP_667669.1 CDS FTF1623c NC_008245.1 1686275 1686595 R ORF ftt1623c; hypothetical protein complement(1686275..1686595) Francisella tularensis subsp. tularensis FSC198 4199253 YP_667670.1 CDS FTF1624c NC_008245.1 1686667 1686987 R ORF ftt1624c; hypothetical protein complement(1686667..1686987) Francisella tularensis subsp. tularensis FSC198 4199254 YP_667671.1 CDS FTF1625c NC_008245.1 1687087 1687677 R ORF ftt1625c; hypothetical protein complement(1687087..1687677) Francisella tularensis subsp. tularensis FSC198 4199255 YP_667672.1 CDS FTF1626c NC_008245.1 1687688 1689094 R ORF ftt1626c; hypothetical protein complement(1687688..1689094) Francisella tularensis subsp. tularensis FSC198 4199256 YP_667673.1 CDS FTF1627c NC_008245.1 1689091 1689894 R ORF ftt1627c; hypothetical protein complement(1689091..1689894) Francisella tularensis subsp. tularensis FSC198 4199257 YP_667674.1 CDS FTF1628c NC_008245.1 1690295 1691605 R Similar to Q88C61 putative metal ion transporter from Pseudomonas putida (446 aa). FASTA: opt: 1033 Z-score: 1180.6 E(): 6.5e-58 Smith-Waterman score: 1035; 40.455 identity in 440 aa overlap ORF ftt1628c; metal ion transporter complement(1690295..1691605) Francisella tularensis subsp. tularensis FSC198 4199258 YP_667675.1 CDS FTF1629c NC_008245.1 1691616 1693295 R ORF ftt1629c; hypothetical protein complement(1691616..1693295) Francisella tularensis subsp. tularensis FSC198 4199259 YP_667676.1 CDS putP NC_008245.1 1693366 1694832 R Similar to PUTP_ECOLI Sodium/proline symporter from E. coli (501 aa). FASTA: opt: 1536 Z-score: 1735.2 E(): 8.4e-89 Smith-Waterman score: 1536; 46.531identity in 490 aa overlap; Sodium/proline permease complement(1693366..1694832) Francisella tularensis subsp. tularensis FSC198 4199127 YP_667677.1 CDS glpX NC_008245.1 1695138 1696124 R type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II complement(1695138..1696124) Francisella tularensis subsp. tularensis FSC198 4200294 YP_667678.1 CDS FTF1632c NC_008245.1 1696144 1696782 R Similar to AAO91263 (Q83AV9) Hypothetical protein from Coxiella burnetti (205 aa). FASTA: opt: 552 Z-score: 685.2 E(): 2.6e-30 Smith-Waterman score: 552; 41.000 identity in 200 aa overlap ORF ftt1632c; hypothetical protein complement(1696144..1696782) Francisella tularensis subsp. tularensis FSC198 4199260 YP_667679.1 CDS FTF1633c NC_008245.1 1696791 1698245 R Similiar to AAP09999 (Q81BU4) Lysine-specific permease from Bacillus cereus (491 aa). FASTA: opt: 1734 Z-score: 1972.4 bits: 374.4 E(): 5.2e-102 Smith-Waterman score: 1817; 53.459 identity in 477 aa overlap ORF ftt1633c; amino acid transporter complement(1696791..1698245) Francisella tularensis subsp. tularensis FSC198 4199261 YP_667680.1 CDS FTF1634c NC_008245.1 1698493 1699161 R ORF ftt1634c; hypothetical protein complement(1698493..1699161) Francisella tularensis subsp. tularensis FSC198 4199262 YP_667681.1 CDS ftsK NC_008245.1 1699283 1701784 D Similar to Q9I0M3 Cell division protein FtsK from Rickettsia prowazekii (811 aa). FASTA: opt: 2030 Z-score: 2059.0 E(): 7.7e-107 Smith-Waterman score: 2197; 45.808 identity in 823 aa overlap; cell division protein 1699283..1701784 Francisella tularensis subsp. tularensis FSC198 4199195 YP_667682.1 CDS lolA NC_008245.1 1701785 1702402 D Similar to LOLA_PSEAE (Q9I0M4) Outer-membrane lipoproteins carrier from Pseudomonas aeruginosa (208 aa). FASTA: opt: 384 Z-score: 440.9 E(): 1e-16 Smith-Waterman score: 384; 30.476 identity in 210 aa overlap; lipoprotein releasing system subunit A, outer membrane lipoproteins carrier 1701785..1702402 Francisella tularensis subsp. tularensis FSC198 4199558 YP_667683.1 CDS FTF1637c NC_008245.1 1702800 1703003 R ORF ftt1637c; hypothetical protein complement(1702800..1703003) Francisella tularensis subsp. tularensis FSC198 4199263 YP_667684.1 CDS trkH NC_008245.1 1703115 1704569 D Similar to Q9KNI3 Potassium uptake protein TrkH from Vibrio cholerae (485 aa). FASTA: opt: 1470 Z-score: 1682.5 E(): 7.3e-86 Smith-Waterman score: 1470; 43.827 identity in 486 aa overlap; potassium uptake protein 1703115..1704569 Francisella tularensis subsp. tularensis FSC198 4199862 YP_667685.1 CDS FTF1639c NC_008245.1 1704584 1705129 R ORF ftt1639c; hypothetical protein complement(1704584..1705129) Francisella tularensis subsp. tularensis FSC198 4199264 YP_667686.1 CDS FTF1644 NC_008245.1 1708673 1710097 D Similar to O86076 Sucrose hydrolase from E. coli (477 aa). FASTA: opt: 787 Z-score: 912.8 E(): 5.4e-43 Smith-Waterman score: 787; 31.929 identity in 451 aa overlap ORF ftt1644; Beta-fructofuranosidase 1708673..1710097 Francisella tularensis subsp. tularensis FSC198 4199820 YP_667687.1 CDS FTF1645 NC_008245.1 1710116 1711348 D Similar to Q8EDM5 Conserved hypothetical protein from Shewanella oneidensis (384 aa). FASTA: opt: 372 Z-score: 419.7 E(): 1.6e-15 Smith-Waterman score: 372; 23.018 identity in 391 aa overlap ORF ftt1645; hypothetical protein 1710116..1711348 Francisella tularensis subsp. tularensis FSC198 4199821 YP_667688.1 CDS dtd NC_008245.1 1711590 1711919 D hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase 1711590..1711919 Francisella tularensis subsp. tularensis FSC198 4199361 YP_667689.1 CDS pyrD NC_008245.1 1712290 1713036 R Similar to Q9WYG8 Dihydroorotate dehydrogenase from Pyrobaculum aerophilum (297 aa). FASTA: opt: 148 Z-score: 178.6 E(): 0.043 Smith-Waterman score: 191; 26.568 identity in 271 aa overlap; diyroorotate dehydrogenase complement(1712290..1713036) Francisella tularensis subsp. tularensis FSC198 4199131 YP_667690.1 CDS pyrF NC_008245.1 1713038 1713682 R Similar to PYRF_STAAM (Q9LCT0) Orotidine 5'-phosphate decarboxylase from Bradyrhizobium japonicum (237 aa). FASTA: opt: 228 z-score: 280.6 E(): 8.8e-08 Smith-Waterman score: 243; 28.061identity in 196 aa overlap; orotidine 5'-phosphate decarboxylase complement(1713038..1713682) Francisella tularensis subsp. tularensis FSC198 4199133 YP_667691.1 CDS FTF1650c NC_008245.1 1717374 1717922 R Similar to Q93LJ4 Periplasmic monofunctional chorismate mutase from Salmonella typhimurium (181 aa). FASTA: opt: 186 Z-score: 223.0 E(): 0.00014 Smith-Waterman score: 186; 31.746 identity in 126 aa overlap ORF ftt1650; chorismate mutase complement(1717374..1717922) Francisella tularensis subsp. tularensis FSC198 4199823 YP_667692.1 CDS FTF1651 NC_008245.1 1718074 1718700 D Similar to Q8KDD5 Hypothetical protein from Chlorobium tepidum (215 aa). FASTA: opt: 569 z-score: 706.8 E(): 1.6e-31 Smith-Waterman score: 569; 40.580 identity in 207 aa overlap ORF ftt1651; hypothetical protein 1718074..1718700 Francisella tularensis subsp. tularensis FSC198 4199824 YP_667693.1 CDS FTF1652c NC_008245.1 1718701 1719570 R Similar to Q8EFC8 Transcriptional regulator, LysR family from Shewanella oneidensis (291 aa). FASTA: opt: 443 Z-score: 527.9 E(): 1.5e-21 Smith-Waterman score: 443; 29.831 identity in 295 aa overlap ORF ftt1652c; LysR family transcriptional regulator complement(1718701..1719570) Francisella tularensis subsp. tularensis FSC198 4199825 YP_667694.1 CDS FTF1653 NC_008245.1 1719696 1720103 D ORF ftt1653; hypothetical protein 1719696..1720103 Francisella tularensis subsp. tularensis FSC198 4199826 YP_667695.1 CDS emrA2 NC_008245.1 1720192 1721157 D Similar to AAO90332 (Q83DE0) Multidrug resistance protein from Coxiella burnetii (331 aa). FASTA: opt: 406 z-score: 447.9 E(): 4.2e-17 Smith-Waterman score: 406; 28.135 identity in 327 aa overlap; HlyD family secretion protein 1720192..1721157 Francisella tularensis subsp. tularensis FSC198 4199673 YP_667696.1 CDS FTF1655 NC_008245.1 1721132 1722196 D ORF ftt1655; hypothetical protein 1721132..1722196 Francisella tularensis subsp. tularensis FSC198 4199827 YP_667697.1 CDS FTF1656c NC_008245.1 1722312 1722863 R Similiar to Q8PGE2 Hypothetical protein from Xanthomonas axonopodis(186 aa). FASTA: opt: 578 Z-score: 703.0 E(): 2.6e-31 Smith-Waterman score: 578; 51.462 identity in 171 aa overlap ORF ftt1656c; hypothetical protein complement(1722312..1722863) Francisella tularensis subsp. tularensis FSC198 4199828 YP_667698.1 CDS FTF1657c NC_008245.1 1723327 1723530 R ORF ftt1657c; hypothetical protein complement(1723327..1723530) Francisella tularensis subsp. tularensis FSC198 4199829 YP_667699.1 CDS FTF1658c NC_008245.1 1723577 1723831 R Similar to BAC68773 (Q82P70) Hypothetical protein from Streptomyces avermitilis (95 aa). FASTA: opt: 135 Z-score: 188.6 E(): 0.012 Smith-Waterman score: 135; 25.316 identity in 79 aa overlap ORF ftt1658c; hypothetical protein complement(1723577..1723831) Francisella tularensis subsp. tularensis FSC198 4199830 YP_667700.1 CDS FTF1659 NC_008245.1 1724084 1725109 D ORF ftt1659; hypothetical protein 1724084..1725109 Francisella tularensis subsp. tularensis FSC198 4199831 YP_667701.1 CDS pyrC NC_008245.1 1725137 1726483 R Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase complement(1725137..1726483) Francisella tularensis subsp. tularensis FSC198 4199130 YP_667702.1 CDS tmpT NC_008245.1 1726615 1727295 D catalyzes the S-adenosylmethionine-dependent transmethylation of thiopurine compounds; may be involved in selenium cycling by forming dimethylselenide and/or dimethyldiselenide; thiopurine S-methyltransferase 1726615..1727295 Francisella tularensis subsp. tularensis FSC198 4199147 YP_667703.1 CDS carA NC_008245.1 1728889 1730055 D catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 1728889..1730055 Francisella tularensis subsp. tularensis FSC198 4200315 YP_667704.1 CDS carB NC_008245.1 1730060 1733344 D four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 1730060..1733344 Francisella tularensis subsp. tularensis FSC198 4200316 YP_667705.1 CDS pyrB NC_008245.1 1733486 1734406 D Similar to PYRB_METJA Aspartate carbamoyltransferase from Methanococcus jannaschii (306 aa). FASTA: opt: 943 Z-score: 1081.5 E(): 2.2e-52 Smith-Waterman score: 943; 49.338 identity in 302 aa overlap; aspartate carbamoyltransferase 1733486..1734406 Francisella tularensis subsp. tularensis FSC198 4199129 YP_667706.1 CDS FTF1666c NC_008245.1 1734419 1735306 R Similar to AAP10961 (Q819E3) 3-hydroxyisobutyrate dehydrogenase from Bacillus cereus (292 aa). FASTA: opt: 384 z-score: 452.2 E(): 2.4e-17 Smith-Waterman score: 384; 24.483 identity in 290 aa overlap ORF ftt1666c; 3-hydroxyisobutyrate dehydrogenase complement(1734419..1735306) Francisella tularensis subsp. tularensis FSC198 4199833 YP_667707.1 CDS FTF1667 NC_008245.1 1735794 1736030 D ORF ftt1667; hypothetical protein 1735794..1736030 Francisella tularensis subsp. tularensis FSC198 4199834 YP_667708.1 CDS sdaC2 NC_008245.1 1736357 1737580 D Similar to Q8ZGH6 Serine transporter from Yersinia pestis (433 aa). FASTA: opt: 1336 Z-score: 1510.1 E(): 2.9e-76 Smith-Waterman score: 1336; 46.078identity in 408 aa overlap.; serine transporter 1736357..1737580 Francisella tularensis subsp. tularensis FSC198 4200728 YP_667709.1 CDS isftu1 NC_008245.1 1738564 1739348 D ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and also mariner elements, show that this transposase shares strongly conserved residues, including a fully conserved dipeptide,Asp-Glu (DE), and a block consisting of a fully conserved Asp and highly conserved Glu, separated by 34 or 35 residues (D35E). The conserved dipeptide is only present if ribosomal frameshifting occurs.; transposase join(1738564..1738890,1738890..1739348) Francisella tularensis subsp. tularensis FSC198 4200182 YP_667710.1 CDS ribD NC_008245.1 1740427 1741494 D Similar to RIBD_AQUAE Riboflavin biosynthesis protein ribD from Aquiflex aeolicus (356 aa). FASTA: opt: 915 z-score: 1060.1 E(): 3.4e-51 Smith-Waterman score: 916; 43.824 identity in 340 aa overlap; riboflavin biosynthesis protein ribD 1740427..1741494 Francisella tularensis subsp. tularensis FSC198 4199215 YP_667711.1 CDS ribB NC_008245.1 1741487 1742092 D catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 1741487..1742092 Francisella tularensis subsp. tularensis FSC198 4199214 YP_667712.1 CDS ribA NC_008245.1 1742085 1743296 D Similar to GCH2_AQUAE Riboflavin biosynthesis protein ribA from Aquiflex aeolicus (406 aa). FASTA: opt: 1135 z-score: 1316.5 E(): 1.8e-65 Smith-Waterman score: 1135; 46.305 identity in 406 aa overlap; riboflavin biosynthesis protein ribA/GTP-cyclohydrolase II 1742085..1743296 Francisella tularensis subsp. tularensis FSC198 4199213 YP_667713.1 CDS ribH NC_008245.1 1743306 1743749 D Similar to AAO90192 (Q83DP8) Riboflavin synthase,beta subunit from Coxiella burnetii (151 aa). FASTA: opt: 496 z-score: 645.4 E(): 4.2e-28 Smith-Waterman score: 496; 53.571 identity in 140 aa overlap; riboflavin synthase beta subunit (6,7-dimethl-8-ribityllumazine synthase) 1743306..1743749 Francisella tularensis subsp. tularensis FSC198 4199217 YP_667714.1 CDS def2 NC_008245.1 1743746 1744270 D Similar to DEF_NEIMA (Q9JQN0) Peptide deformylase from Neisseria meningitidis (167 aa). FASTA: opt: 465 z-score: 571.7 E(): 5.4e-24 Smith-Waterman score: 465; 46.914 identity in 162 aa overlap; peptide deformylase 1743746..1744270 Francisella tularensis subsp. tularensis FSC198 4199343 YP_667715.1 CDS FTF1676 NC_008245.1 1744352 1745344 D ORF ftt1676; hypothetical protein 1744352..1745344 Francisella tularensis subsp. tularensis FSC198 4199835 YP_667716.1 CDS mnmA NC_008245.1 1745364 1746509 R catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA complement(1745364..1746509) Francisella tularensis subsp. tularensis FSC198 4199865 YP_667717.1 CDS lepA NC_008245.1 1746457 1748241 R binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA complement(1746457..1748241) Francisella tularensis subsp. tularensis FSC198 4199511 YP_667718.1 CDS rpsT NC_008245.1 1748511 1748783 D binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 1748511..1748783 Francisella tularensis subsp. tularensis FSC198 4198958 YP_667719.1 CDS olmA NC_008245.1 1748857 1749213 R Similar to Q8KTI1 Outer membrane lipoprotein OmlA from Azaobacter vinelandii (171 aa). FASTA: opt: 208 Z-score: 273.7 E(): 2.1e-07 Smith-Waterman score: 208; 30.392 identity in 102 aa overlap; outer membrane lipoprotein complement(1748857..1749213) Francisella tularensis subsp. tularensis FSC198 4200762 YP_667720.1 CDS lpcA NC_008245.1 1749221 1749817 R Similar to Q8EK08 Phosphoheptose isomerase from Shewanella oneidensis (197 aa). FASTA: opt: 705 z-score: 847.8 E(): 2.3e-39 Smith-Waterman score: 705; 53.684 identity in 190 aa overlap; phosphoheptose isomerase complement(1749221..1749817) Francisella tularensis subsp. tularensis FSC198 4199563 YP_667721.1 CDS FTF1683c NC_008245.1 1752366 1753517 R Similar to Q8NM37 Permeases of the major facilitator superfamily from Corynebacterium glutamicum (398 aa). FASTA: opt: 440 z-score: 489.8 E(): 2e-19 Smith-Waterman score: 440; 24.211 identity in 380 aa overlap ORF ftt1683c; major facilitator transporter complement(1752366..1753517) Francisella tularensis subsp. tularensis FSC198 4200153 YP_667722.1 CDS FTF1684 NC_008245.1 1753614 1754516 D Similar to Q8D3N4 Transcriptional regulator from Vibrio vulnificus (307 aa). FASTA: opt: 510 Z-score: 590.3 E(): 5e-25 32.975 identity in 279 aa overlap ORF ftt1684; transcriptional regulator 1753614..1754516 Francisella tularensis subsp. tularensis FSC198 4200154 YP_667723.1 CDS FTF1685 NC_008245.1 1754718 1755443 D ORF ftt1685; hypothetical protein 1754718..1755443 Francisella tularensis subsp. tularensis FSC198 4200155 YP_667724.1 CDS FTF1686c NC_008245.1 1755597 1756265 R Similar to Q894C5 Proline synthetase associated protein from Clostridium tetani (225 aa). FASTA: opt: 462 z-score: 549.8 E(): 8.9e-23 37.220 identity in 223 aa overlap ORF ftt1686c; hypothetical protein complement(1755597..1756265) Francisella tularensis subsp. tularensis FSC198 4200156 YP_667725.1 CDS gidB NC_008245.1 1756262 1756879 R glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB complement(1756262..1756879) Francisella tularensis subsp. tularensis FSC198 4199781 YP_667726.1 CDS FTF1688 NC_008245.1 1756979 1758184 D Similar to Q8EFB8 Tyrosine-specific transport protein from Shewanella oneidensis (395 aa). FASTA: opt: 854 z-score: 967.0 E(): 5.2e-46 38.378 identity in 370 aa overlap ORF ftt1688; aromatic amino acid HAAP transporter 1756979..1758184 Francisella tularensis subsp. tularensis FSC198 4200157 YP_667727.1 CDS FTF1689c NC_008245.1 1758181 1758873 R Similar to CAD84514 (Q82WQ9) Possible transmembrane protein from Nitrosomonas europaea (223 aa). FASTA: opt: 294 z-score: 358.6 E(): 4e-12 25.481 identity in 208 aa overlap ORF ftt1689c; hypothetical protein complement(1758181..1758873) Francisella tularensis subsp. tularensis FSC198 4200158 YP_667728.1 CDS FTF1690 NC_008245.1 1759277 1759942 D Similar to Q9ABA7 NADH dehydrogenase from Caulobacter crescentus (220 aa). FASTA: opt: 429 z-score: 535.0 E(): 6e-22 35.545 identity in 211 aa overlap ORF ftt1690; NADH dehydrogenase 1759277..1759942 Francisella tularensis subsp. tularensis FSC198 4200159 YP_667729.1 CDS FTF1691 NC_008245.1 1760213 1760737 D This CDS is disrupted by the insertion of an ISFtu1 element occurring very near the C-terminal end. It is not clear whether this insertion affects the function of the protein. ORF ftt1691; hypothetical protein 1760213..1760737 Francisella tularensis subsp. tularensis FSC198 4200160 YP_667730.1 CDS isftu1 NC_008245.1 1760761 1761545 D ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and also mariner elements, show that this transposase shares strongly conserved residues, including a fully conserved dipeptide,Asp-Glu (DE), and a block consisting of a fully conserved Asp and highly conserved Glu, separated by 34 or 35 residues (D35E). The conserved dipeptide is only present if ribosomal frameshifting occurs.; transposase join(1760761..1761087,1761087..1761545) Francisella tularensis subsp. tularensis FSC198 4200183 YP_667731.1 CDS FTF1693c NC_008245.1 1761688 1762452 R Similar to Q87SC0 conserved hypothetical protein from Vibrio parahaemolyticus (258 aa). FASTA: opt: 724 z-score: 845.1 E(): 3.2e-39 46.094 identity in 256 aa overlap ORF ftt1693c; hypothetical protein complement(1761688..1762452) Francisella tularensis subsp. tularensis FSC198 4200161 YP_667732.1 CDS FTF1694c NC_008245.1 1763093 1763527 R Similar to Q8ZCK6 Putative membrane protein (Hypothetical) from Yersinia pestis (175 aa). FASTA: opt:353 z-score 450 E():2.9e-17 35.9identity in 142 aa overlap ORF ftt1694c; hypothetical protein complement(1763093..1763527) Francisella tularensis subsp. tularensis FSC198 4200162 YP_667733.1 CDS groES NC_008245.1 1763778 1764065 D 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 1763778..1764065 Francisella tularensis subsp. tularensis FSC198 4200299 YP_667734.1 CDS groEL NC_008245.1 1764103 1765737 D 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL 1764103..1765737 Francisella tularensis subsp. tularensis FSC198 4200298 YP_667735.1 CDS isftu1 NC_008245.1 1765953 1766737 R ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and also mariner elements, show that this transposase shares strongly conserved residues, including a fully conserved dipeptide,Asp-Glu (DE), and a block consisting of a fully conserved Asp and highly conserved Glu, separated by 34 or 35 residues (D35E). The conserved dipeptide is only present if ribosomal frameshifting occurs.; transposase complement(join(1765953..1766411,1766411..1766737)) Francisella tularensis subsp. tularensis FSC198 4200184 YP_667736.1 CDS fdh NC_008245.1 1766795 1767511 R Similar to FDH_PSESR Formate dehydrogenase from Pseudomonas sp. (strain 101) (400 aa). FASTA: opt: 1074 z-score: 1253.7, E(): 5.5e-62, 66.949 identity in 236 aa overlap. This CDS is disrupted by the insertion of an ISFtu1 element occurring very near the C-terminal end. It is not clear whether this insertion affects the function of the protein.; formate dehydrogenase complement(1766795..1767511) Francisella tularensis subsp. tularensis FSC198 4199406 YP_667737.1 CDS pdpA2 NC_008245.1 1773101 1775563 D Similar to AAP58968.1 (Q7X3I9) PdpA from Francisella novicida (820 aa). BLAST Score = 1545 bits (4000), Expect = 0.0 Identities = 777/820 (94), Positives = 787/820 (95). Identical to FTF1344. It is part of the duplicated region 1767715..1801625 which is identical to 1374371..1408281; hypothetical protein 1773101..1775563 Francisella tularensis subsp. tularensis FSC198 4199231 YP_667738.1 CDS pdpB2 NC_008245.1 1775568 1778849 D Similar to AAP58967.1 (Q7X3J0) PdpB from Francisella novicida (1093 aa). BLAST Score = 1914 bits (4959), Expect = 0.0 Identities = 975/1093 (89),Positives = 988/1093 (90). This protein is identical to FTF1345. It is part of the duplicated region 1767715..1801625 which is identical to 1374371..140828; hypothetical protein 1775568..1778849 Francisella tularensis subsp. tularensis FSC198 4199233 YP_667739.1 CDS FTF1701 NC_008245.1 1778839 1779216 D Identical to FTF1346. It is part of the duplicated region 1767715..1801625 which is identical to 1374371..1408281 ORF ftt1701; hypothetical protein 1778839..1779216 Francisella tularensis subsp. tularensis FSC198 4200163 YP_667740.1 CDS FTF1702 NC_008245.1 1779229 1779723 D Similar to AAP58969.1 (Q7XI38) unknown protein from Francisella novicida (164 aa). BLAST Score = 305 bits (780), Expect = 2e-82 Identities = 163/164 (99),Positives = 163/164 (99). Identical to FTF1347. It is part of the duplicated region 1767715..1801625 which is identical to 1374371..1408281 ORF ftt1702; hypothetical protein 1779229..1779723 Francisella tularensis subsp. tularensis FSC198 4200164 YP_667741.1 CDS FTF1703 NC_008245.1 1779728 1781458 D 1-213 aa similar to AAP58970.1 (Q7X3I7) unknown Francisella novicida (212 aa). BLAST Score 352 ,Expect = 1e-95 Identities = 177/209 (84), Positives = 189/209 (90). 330-580 aa similar to AAP58971.1 (Q7X3I6) unknown protein from Francisella tularensis subsp. novicida (251 aa). BLAST Score = 483 bits (1244), Expect = e-135 Identities = 243/251 (96), Positives = 249/251 (99). Identical to FTF1348. It is part of the duplicated region 1767715..1801625 which is identical to 1374371..1408281. Protein fusion product of two hypothetical proteins in F. novicida. ORF ftt1703; hypothetical protein 1779728..1781458 Francisella tularensis subsp. tularensis FSC198 4200165 YP_667742.1 CDS FTF1704 NC_008245.1 1781459 1781980 D Similar to AAP58972.1 (Q7X3I5) unknown protein from Francisella novicida (173 aa). BLAST Score = 336, Expect = 1e-91 Identities = 170/173 (98), Positives = 171/173 (98). Identical to FTF1349. It is part of the duplicated region 1767715..1801625 which is identical to 1374371..1408281 ORF ftt1704; hypothetical protein 1781459..1781980 Francisella tularensis subsp. tularensis FSC198 4200166 YP_667743.1 CDS FTF1705 NC_008245.1 1781993 1783423 D Similar to AAP58973.1 (Q7X3I4) unknown protein from Francisella novicida (476 aa). BLAST Score = 864 bits (2233), Expect = 0.0 Identities = 433/476 (90),Positives = 437/476 (91). Identical to FTF1350. It is part of the duplicated region 1767715..1801625 which is identical to 1374371..1408281 ORF ftt1705; hypothetical protein 1781993..1783423 Francisella tularensis subsp. tularensis FSC198 4200167 YP_667744.1 CDS FTF1706 NC_008245.1 1783436 1784059 D Similar to AAP58974.1 (Q7X3I3) unknown protein from Francisella novicida (207 aa). BLAST Score = 391 bits (1005), Expect = e-108 Identities = 194/207 (93),Positives = 195/207 (94). Identical to FTF1351. It is part of the duplicated region 1767715..1801625 which is identical to 1374371..1408281 ORF ftt1706; hypothetical protein 1783436..1784059 Francisella tularensis subsp. tularensis FSC198 4200168 YP_667745.1 CDS FTF1707 NC_008245.1 1784081 1785232 D Similar to AAP58975.1 (Q7X3I2) unknown protein from Francisella novicida (262 aa), BLAST Score = 443 bits (1140), Expect = e-12 Identities = 229/262 (87),Positives = 235/262 (89). Identical to FTF1352. It is part of the duplicated region 1767715..1801625 which is identical to 1374371..1408281 ORF ftt1707; hypothetical protein 1784081..1785232 Francisella tularensis subsp. tularensis FSC198 4200169 YP_667746.1 CDS FTF1708 NC_008245.1 1785198 1785971 D Similar to AAP58976.1 (Q7X3I1) unknown protein from Francisella novicida (257 aa). BLAST Score = 412, Expect = e-114 Identities = 213/257 (82), Positives = 213/257 (82). Identical to FTF1353. It is part of the duplicated region 1767715..1801625 which is identical to 1374371..1408281 ORF ftt1708; hypothetical protein 1785198..1785971 Francisella tularensis subsp. tularensis FSC198 4200170 YP_667747.1 CDS pdpC2 NC_008245.1 1786011 1789997 D Similar to AAP58966.1 PdpC from Francisella novicida (1218 aa). BLAST Score = 2172, Expect = 0.0 Identities = 1089/1220 (89), Positives = 1120/1220 (91),Gaps = 3/1220 (0). Identical to FTF1354. It is part of the duplicated region 1767715..1801625 which is identical to 1374371..1408281; hypothetical protein 1786011..1789997 Francisella tularensis subsp. tularensis FSC198 4199235 YP_667748.1 CDS FTF1710 NC_008245.1 1790015 1790590 D Similar to AAP58977.1 (Q7X3I0) unknown protein from Francisella novicida (188 aa). BLAST Score = 321, Expect = 3e-87 Identities = 156/174 (89), Positives = 162/174 (93). Identical to FTF1355. It is part of the duplicated region 1767715..1801625 which is identical to 1374371..1408281 ORF ftt1710; hypothetical protein 1790015..1790590 Francisella tularensis subsp. tularensis FSC198 4200171 YP_667749.1 CDS iglD2 NC_008245.1 1790597 1791802 R Similar to AAP58965.1 (Q7C3J6) IglD from Francisella novicida (398 aa). BLAST Score = 746, Expect = 0.0 Identities = 382/398 (95), Positives = 383/398 (96) Identical to FTF1356. It is part of the duplicated region 1767715..1801625 which is identical to 1374371..1408281; intracellular growth locus, subunit D complement(1790597..1791802) Francisella tularensis subsp. tularensis FSC198 4200660 YP_667750.1 CDS iglC2 NC_008245.1 1791814 1792449 R Similar to AAP58964.1 (Q7X3J5) IglC from Francisella novicida (23 kDa protein) (211 aa). BLAST Score = 405,Expect = e-112 Identities = 209/211 (99),Positives = 210/211 (99). Identical to FTF1357. It is part of the duplicated region 1767715..1801625 which is identical to 1374371..1408281; intracellular growth locus, subunit C complement(1791814..1792449) Francisella tularensis subsp. tularensis FSC198 4200658 YP_667751.1 CDS iglB2 NC_008245.1 1792460 1794004 R Similar to AAP58963.1 (Q7X3J4) IglB from Francisella novicida (514 aa). BLAST Score = 997, Expect = 0.0 Identities = 496/514 (96), Positives = 499/514 (97). Identical to FTF1358. It is part of the duplicated region 1767715..1801625 which is identical to 1374371..1408281; intracellular growth locus, subunit B complement(1792460..1794004) Francisella tularensis subsp. tularensis FSC198 4200656 YP_667752.1 CDS iglA2 NC_008245.1 1793994 1794584 R Similar to AAP58962.1 (Q7X3J5) IglA from Francisella novicida (184 aa). BLAST Score = 350, Expect = 6e-96 Identities = 181/184 (98), Positives = 181/184 (98). Identical to FTF1359. It is part of the duplicated region 1767715..1801625 which is identical to 1374371..1408281; intracellular growth locus, subunit A complement(1793994..1794584) Francisella tularensis subsp. tularensis FSC198 4200654 YP_667753.1 CDS pdpD2 NC_008245.1 1794629 1798216 R Similar to AAP58961.1 (Q7C3J6) PdpD from Francisella novicida (1245 aa). BLAST Score = 2194, Expect = 0.0 Identities = 1133/1245 (91), Positives = 1154/1245 (92), Gaps = 50/1245 (4). Identical to FTF1360. It is part of the duplicated region 1767715..1801625 which is identical to 1374371..1408281; hypothetical protein complement(1794629..1798216) Francisella tularensis subsp. tularensis FSC198 4199237 YP_667754.1 CDS isftu1 NC_008245.1 1800572 1801356 R ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and also mariner elements, show that this transposase shares strongly conserved residues, including a fully conserved dipeptide,Asp-Glu (DE), and a block consisting of a fully conserved Asp and highly conserved Glu, separated by 34 or 35 residues (D35E). The conserved dipeptide is only present if ribosomal frameshifting occurs.; transposase complement(join(1800572..1801030,1801030..1801356)) Francisella tularensis subsp. tularensis FSC198 4200185 YP_667755.1 CDS purL NC_008245.1 1801914 1805786 R catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase complement(1801914..1805786) Francisella tularensis subsp. tularensis FSC198 4199121 YP_667756.1 CDS purF NC_008245.1 1805786 1807276 R Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase complement(1805786..1807276) Francisella tularensis subsp. tularensis FSC198 4199118 YP_667757.1 CDS gad NC_008245.1 1807370 1808716 R Similar to Q8FHG5 Glutamate decarboxylase beta from E. coli (489 aa). FASTA: opt: 1709 Z-score: 1968.5 bits: 373.6 E(): 8.6e-102 Smith-Waterman score: 1709; 57.011 identity in 435 aa overlap; glutamate decarboxylase complement(1807370..1808716) Francisella tularensis subsp. tularensis FSC198 4199207 YP_667758.1 CDS FTF1723c NC_008245.1 1808727 1809371 R Similar to GSP_BACBR (P40683) 4'-phosphopantetheinyl transferase from Bacillus brevis (237 aa). FASTA: opt: 224 Z-score: 292.3 E(): 2.2e-08 Smith-Waterman score: 224; 33.929 identity in 112 aa overlap ORF ftt1723c; hypothetical protein complement(1808727..1809371) Francisella tularensis subsp. tularensis FSC198 4199896 YP_667759.1 CDS tolC NC_008245.1 1809377 1810906 R Similar to TOLC_ECOLI (P02930) Outer membrane protein tolC precursor from E. coli (495 aa). FASTA: opt: 548 Z-score: 649.7 E(): 2.7e-28 Smith-Waterman score: 548; 28.000 identity in 425 aa overlap; outer membrane protein tolC complement(1809377..1810906) Francisella tularensis subsp. tularensis FSC198 4199150 YP_667760.1 CDS pcm NC_008245.1 1810915 1811535 R Similar to Q9JXU0 Protein-L-isoaspartate O-methyltransferase from Neisseria meningitidis (218 aa). FASTA: opt: 335 Z-score: 438.9 E(): 1.5e-16 Smith-Waterman score: 335; 33.659 identity in 205 aa overlap; protein-L-isoaspartate O-methyltransferase complement(1810915..1811535) Francisella tularensis subsp. tularensis FSC198 4200098 YP_667761.1 CDS yegQ NC_008245.1 1811855 1813186 D Similar to YEGQ_ECOLI (P76403) Putative protease yegQ from E. coli (453 aa). FASTA: opt: 1828 Z-score: 2215.7 E(): 1.6e-115 Smith-Waterman score: 1828; 61.745identity in 447 aa overlap Truncated ortholog (188 aa) previously reported in Schu as O68834 Hypothetical 21.3 kDa protein and AAC12939 unknown; protease yegQ 1811855..1813186 Francisella tularensis subsp. tularensis FSC198 4199097 YP_667762.1 CDS FTF1727c NC_008245.1 1813227 1814417 R Similar to Q83CE1 Drug resistance transporter,Bcr/CflA family from Coxiella burnetii (398 aa). FASTA: opt: 957 Z-score: 1006.0 E(): 3.8e-48 Smith-Waterman score: 957; 38.542identity in 384 aa overlap ORF ftt1727c; multidrug resistance protein, membrane located complement(1813227..1814417) Francisella tularensis subsp. tularensis FSC198 4199897 YP_667763.1 CDS nhaD NC_008245.1 1814583 1816010 D Similar to Q8D4S6 Na+/H+ antiporter NhaD from Vibrio vulnificus (478 aa). FASTA: opt: 1428 Z-score: 1679.2 E(): 1.2e-85 Smith-Waterman score: 1592; 50.617identity in 486 aa overlap; Na+/H+ antiporter 1814583..1816010 Francisella tularensis subsp. tularensis FSC198 4200241 YP_667764.1 CDS FTF1730c NC_008245.1 1817661 1819535 R Similar to Q97MC6 Amino acid transporter from Clostridium acetobutylicum (620 aa). FASTA: opt: 1338 Z-score: 1514.2 E(): 1.9e-76 Smith-Waterman score: 1338; 37.745 identity in 612 aa overlap ORF ftt1730c; amino acid transporter complement(1817661..1819535) Francisella tularensis subsp. tularensis FSC198 4199898 YP_667765.1 CDS obgE NC_008245.1 1819542 1820546 R essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE complement(1819542..1820546) Francisella tularensis subsp. tularensis FSC198 4199899 YP_667766.1 CDS FTF1732c NC_008245.1 1820622 1821818 R Similar to Q8FGM8 Tyrosine-specific transport protein from E. coli (403 aa). FASTA: opt: 724 Z-score: 839.2 E(): 6.8e-39 Smith-Waterman score: 724; 35.638 identity in 376 aa overlap ORF ftt1732; aromatic amino acid HAAP transporter complement(1820622..1821818) Francisella tularensis subsp. tularensis FSC198 4199900 YP_667767.1 CDS FTF1733 NC_008245.1 1821945 1822256 D ORF ftt1733; hypothetical protein 1821945..1822256 Francisella tularensis subsp. tularensis FSC198 4199901 YP_667768.1 CDS kdpD NC_008245.1 1823837 1826518 R Similar to Q8U9E1 Two component sensor kinase from Agrobacterium tumefaciens (900 aa). FASTA: opt: 1625 Z-score: 1777.7 E(): 3.6e-91 Smith-Waterman score: 1625; 32.745 identity in 907 aa overlap; two component sensor protein kdpD complement(1823837..1826518) Francisella tularensis subsp. tularensis FSC198 4199504 YP_667769.1 CDS kdpC NC_008245.1 1826622 1827176 R Similar to Q8R8I7 K+-transporting ATPase, c chain from Thermoanaerobacter tengcogenesis (193 aa). FASTA: opt: 404 Z-score: 471.4 E(): 2.1e-18 Smith-Waterman score: 404; 43.333identity in 180 aa overlap; potassium-transporting ATPase C chain complement(1826622..1827176) Francisella tularensis subsp. tularensis FSC198 4199503 YP_667770.1 CDS kdpB NC_008245.1 1827193 1829232 R Similar to ATKB_RHIME (Q92XJ0) Potassium-transporting ATPase B chain from Rhizobium meliloti (680 aa). FASTA: opt: 2393 Z-score: 2638.7 E(): 4.4e-139 Smith-Waterman score: 2393; 55.490 identity in 683 aa overlap; potassium-transporting ATPase B chain complement(1827193..1829232) Francisella tularensis subsp. tularensis FSC198 4199502 YP_667771.1 CDS isftu1 NC_008245.1 1831691 1832475 R ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and also mariner elements, show that this transposase shares strongly conserved residues, including a fully conserved dipeptide,Asp-Glu (DE), and a block consisting of a fully conserved Asp and highly conserved Glu, separated by 34 or 35 residues (D35E). The conserved dipeptide is only present if ribosomal frameshifting occurs.; transposase complement(join(1831691..1832149,1832149..1832475)) Francisella tularensis subsp. tularensis FSC198 4200186 YP_667772.1 CDS ipdC NC_008245.1 1833212 1834909 R Similar to Q8TT45 Indolepyruvate decarboxylase Methanosarcina activorans (550 aa). FASTA: opt: 1265 Z-score: 1467.5 E(): 7.6e-74 Smith-Waterman score: 1265; 36.909 identity in 550 aa overlap; indolepyruvate decarboxylase complement(1833212..1834909) Francisella tularensis subsp. tularensis FSC198 4199612 YP_667773.1 CDS FTF1746 NC_008245.1 1835440 1836363 D Similar to Q87YG1 Signal peptide peptidase SppA,36K type from Pseudomonas syringae (332 a). FASTA: opt: 839 Z-score: 1007.2 E(): 3.3e-48 Smith-Waterman score: 839; 46.622 identity in 296 aa overlap ORF ftt1746; peptidase 1835440..1836363 Francisella tularensis subsp. tularensis FSC198 4199906 YP_667774.1 CDS FTF1747 NC_008245.1 1836417 1836992 D Similar to AAO90156 (Q83DT1) Outer membrane protein OmpH, putative, from Coxiella burnetii (165 aa). FASTA: opt: 175 Z-score: 183.6 E(): 0.022 Smith-Waterman score: 216; 26.816 identity in 179 aa overlap ORF ftt1747; outer membrane protein 1836417..1836992 Francisella tularensis subsp. tularensis FSC198 4199907 YP_667775.1 CDS glpe NC_008245.1 1837128 1837550 D Similar to AAO91018 (Q83BI7) Rhodanese domain protein Coxiella burnetii (144 aa). FASTA: opt: 279 Z-score: 342.5 E(): 3.5e-11 Smith-Waterman score: 279; 33.094 identity in 139 aa overlap; thiosulfate sulfurtransferase 1837128..1837550 Francisella tularensis subsp. tularensis FSC198 4199794 YP_667776.1 CDS secB1 NC_008245.1 1837577 1838026 D molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB 1837577..1838026 Francisella tularensis subsp. tularensis FSC198 4200734 YP_667777.1 CDS recA NC_008245.1 1838048 1839127 D catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 1838048..1839127 Francisella tularensis subsp. tularensis FSC198 4200599 YP_667778.1 CDS recX NC_008245.1 1839114 1839566 D Similar to RECX_HAEIN (P43706) Regulatory protein recX from Haemophilus influenzae (126 aa). FASTA: opt: 243 Z-score: 314.3 E(): 1.3e-09 Smith-Waterman score: 243; 31.967 identity in 122 aa overlap; regulatory protein recX 1839114..1839566 Francisella tularensis subsp. tularensis FSC198 4200608 YP_667779.1 CDS ssb NC_008245.1 1839739 1840215 D Similar to SSB_HAEIN P44409 Single-strand binding protein (SSB) from Haemophilus influenzae (168 aa). FASTA: opt: 437 Z-score: 543.8 E(): 1.9e-22 Smith-Waterman score: 437; 44.578identity in 166 aa overlap; single-strand binding protein 1839739..1840215 Francisella tularensis subsp. tularensis FSC198 4199084 YP_667780.1 CDS tdcD NC_008245.1 1840321 1841475 D Similar to ACKA_CLOTS (Q59331) Acetate kinase (Acetokinase) from Clostridium thermosaccharolyticum (400 aa). FASTA: opt: 1204 Z-score: 1394.5 E(): 8e-70 Smith-Waterman score: 1204; 49.873 identity in 395 aa overlap; propionate kinase 1840321..1841475 Francisella tularensis subsp. tularensis FSC198 4199134 YP_667781.1 CDS pta NC_008245.1 1841485 1843581 D catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate; phosphate acetyltransferase 1841485..1843581 Francisella tularensis subsp. tularensis FSC198 4199947 YP_667782.1 CDS isftu1 NC_008245.1 1844589 1845373 R ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and also mariner elements, show that this transposase shares strongly conserved residues, including a fully conserved dipeptide,Asp-Glu (DE), and a block consisting of a fully conserved Asp and highly conserved Glu, separated by 34 or 35 residues (D35E). The conserved dipeptide is only present if ribosomal frameshifting occurs.; transposase complement(join(1844589..1845047,1845047..1845373)) Francisella tularensis subsp. tularensis FSC198 4200187 YP_667783.1 CDS FTF1758c NC_008245.1 1846810 1847403 R Similar to Q8D0W2 Putative cytochrome from Yersinia pestis (199 aa). FASTA: opt: 273 Z-score: 328.7 E(): 1.9e-10 Smith-Waterman score: 273; 27.979identity in 193 aa overlap ORF ftt1758c; B-type cytochrome complement(1846810..1847403) Francisella tularensis subsp. tularensis FSC198 4199909 YP_667784.1 CDS nhaA NC_008245.1 1848371 1849522 D exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH; pH-dependent sodium/proton antiporter 1848371..1849522 Francisella tularensis subsp. tularensis FSC198 4200240 YP_667785.1 CDS FTF1761 NC_008245.1 1849587 1850306 D Similar to YAFD_ECOLI (P30865) Hypothetical protein yafD from E. coli (266 aa). FASTA: opt: 320 Z-score: 403.2 E(): 1.5e-14 Smith-Waterman score: 320; 34.498 identity in 229 aa overlap ORF ftt1761; hypothetical protein 1849587..1850306 Francisella tularensis subsp. tularensis FSC198 4199911 YP_667786.1 CDS FTF1762c NC_008245.1 1850312 1851052 R Similar to Q9F728 Putative N-acylhomoserine lactone synthase from Pseudomonas fluorescens (259 aa). FASTA: opt: 408 Z-score: 521.4 E(): 3.8e-21 Smith-Waterman score: 408; 34.498 identity in 229 aa overlap ORF ftt1762c; acetyltransferase protein complement(1850312..1851052) Francisella tularensis subsp. tularensis FSC198 4199535 YP_667787.1 CDS FTF1763c NC_008245.1 1851066 1851818 R Similar to Q9F728 Putative N-acylhomoserine lactone syntase from Pseudomonas fluorescens (259 aa). FASTA: opt: 442 Z-score: 546.9 E(): 1.4e-22 Smith-Waterman score: 442; 37.963 identity in 216 aa overlap. ORF ftt1763c; acetyltransferase protein complement(1851066..1851818) Francisella tularensis subsp. tularensis FSC198 4199536 YP_667788.1 CDS FTF1764c NC_008245.1 1851981 1852304 R Similar to FER_PSEST (P08811) Ferredoxin from Pseudomonas stutzeri (106 aa). FASTA: opt: 535 Z-score: 674.6 E(): 1.1e-29 Smith-Waterman score: 535; 65.714identity in 105 aa overlap ORF ftt1764c; ferredoxin complement(1851981..1852304) Francisella tularensis subsp. tularensis FSC198 4199537 YP_667789.1 CDS FTF1765 NC_008245.1 1852524 1853177 D ORF ftt1765; hypothetical protein 1852524..1853177 Francisella tularensis subsp. tularensis FSC198 4199538 YP_667790.1 CDS FTF1766 NC_008245.1 1853255 1853911 D Similar to Q8YLW7 O-methyltransferase from Anabaena sp. (220 aa). FASTA: opt: 622 Z-score: 791.6 E(): 3.4e-36 Smith-Waterman score: 622; 43.836identity in 219 aa overlap ORF ftt1766; O-methyltransferase 1853255..1853911 Francisella tularensis subsp. tularensis FSC198 4199539 YP_667791.1 CDS purT NC_008245.1 1853913 1855073 R non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis; phosphoribosylglycinamide formyltransferase 2 complement(1853913..1855073) Francisella tularensis subsp. tularensis FSC198 4199124 YP_667792.1 CDS FTF1768c NC_008245.1 1855127 1856947 R Similar to Q9KQP6 Chitinase from Vibrio cholerae (846 aa). FASTA: opt: 242 Z-score: 272.3 E(): 2.8e-07 Smith-Waterman score: 279; 21.309 identity in 718 aa overlap. ORF ftt1768c; chitinase complement(1855127..1856947) Francisella tularensis subsp. tularensis FSC198 4199540 YP_667793.1 CDS clpB NC_008245.1 1857569 1860148 R Similar to FASTA: AAO89660 (Q83F55) ClpB protein from Coxiella burnetii (859 aa). FASTA: opt: 3593 Z-score: 3223.6 E(): 1.1e-171 Smith-Waterman score: 3593; 65.357 identity in 840 aa overlap; ClpB protein complement(1857569..1860148) Francisella tularensis subsp. tularensis FSC198 4200323 YP_667794.1 CDS FTF1771 NC_008245.1 1861167 1861520 D ORF ftt1771; hypothetical protein 1861167..1861520 Francisella tularensis subsp. tularensis FSC198 4199542 YP_667795.1 CDS trpA NC_008245.1 1861575 1862384 R catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha complement(1861575..1862384) Francisella tularensis subsp. tularensis FSC198 4200716 YP_667796.1 CDS trpB NC_008245.1 1862384 1863574 R catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta complement(1862384..1863574) Francisella tularensis subsp. tularensis FSC198 4200717 YP_667797.1 CDS clcA NC_008245.1 1864990 1866519 R Similar to CLCA_ECOLI (P37019) Voltage-gated ClC-type chloride channel from E. coli (473 aa). FASTA: opt: 1120 Z-score: 1211.7 E(): 1.3e-59 Smith-Waterman score: 1120; 39.545 identity in 440 aa overlap; voltage-gated ClC-type chloride channel clcA complement(1864990..1866519) Francisella tularensis subsp. tularensis FSC198 4200322 YP_667798.1 CDS FTF1776c NC_008245.1 1866590 1866988 R ORF ftt1776c; hypothetical protein complement(1866590..1866988) Francisella tularensis subsp. tularensis FSC198 4199544 YP_667799.1 CDS FTF1777c NC_008245.1 1866991 1867401 R ORF ftt1777c; hypothetical protein complement(1866991..1867401) Francisella tularensis subsp. tularensis FSC198 4199545 YP_667800.1 CDS FTF1778c NC_008245.1 1867422 1867814 R ORF ftt1778c; hypothetical protein complement(1867422..1867814) Francisella tularensis subsp. tularensis FSC198 4199546 YP_667801.1 CDS isftu1 NC_008245.1 1868647 1869431 D ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and also mariner elements, show that this transposase shares strongly conserved residues, including a fully conserved dipeptide,Asp-Glu (DE), and a block consisting of a fully conserved Asp and highly conserved Glu, separated by 34 or 35 residues (D35E). The conserved dipeptide is only present if ribosomal frameshifting occurs.; transposase join(1868647..1868973,1868973..1869431) Francisella tularensis subsp. tularensis FSC198 4200188 YP_667802.1 CDS FTF1781c NC_008245.1 1869670 1870419 R ORF ftt1781c; hypothetical protein complement(1869670..1870419) Francisella tularensis subsp. tularensis FSC198 4199548 YP_667803.1 CDS yjjK NC_008245.1 1870361 1872040 R ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; putative ABC transporter ATP-binding protein complement(1870361..1872040) Francisella tularensis subsp. tularensis FSC198 4199031 YP_667804.1 CDS FTF1783 NC_008245.1 1872208 1873494 D Similar to Q83A52 Major facilitator family transporter from Coxiella burnetii (443 aa). FASTA: opt: 751 Z-score: 809.6 E(): 3.3e-37 Smith-Waterman score: 751; 34.204identity in 421 aa overlap ORF ftt1783; major facilitator transporter 1872208..1873494 Francisella tularensis subsp. tularensis FSC198 4199549 YP_667805.1 CDS FTF1784c NC_008245.1 1873475 1873783 R ORF ftt1784c; hypothetical protein complement(1873475..1873783) Francisella tularensis subsp. tularensis FSC198 4199550 YP_667806.1 CDS FTF1785c NC_008245.1 1873795 1874007 R ORF ftt1785c; hypothetical protein complement(1873795..1874007) Francisella tularensis subsp. tularensis FSC198 4199551 YP_667807.1 CDS FTF1787c NC_008245.1 1875041 1875652 R Similar to Q8UGV8 LysE family transporter from Agrobactium tumifaciens (202 aa). FASTA: opt: 346 Z-score: 414.9 E(): 3.2e-15 Smith-Waterman score: 346; 30.102 identity in 196 aa overlap ORF ftt1787c; amino acid transporter LysE complement(1875041..1875652) Francisella tularensis subsp. tularensis FSC198 4199988 YP_667808.1 CDS FTF1789 NC_008245.1 1876953 1877747 D Similar to Q83C04 Membrane protein, putative, from Coxiella burnetii (263 aa). FASTA: opt: 496 Z-score: 540.4 E(): 3.3e-22 Smith-Waterman score: 496; 30.038 identity in 263 aa overlap ORF ftt1789; hypothetical protein 1876953..1877747 Francisella tularensis subsp. tularensis FSC198 4199989 YP_667809.1 CDS FTF1791 NC_008245.1 1878156 1878518 D ORF ftt1791; hypothetical protein 1878156..1878518 Francisella tularensis subsp. tularensis FSC198 4199991 YP_667810.1 CDS pepN NC_008245.1 1879650 1882244 R Similar to AMPN_ECOLI (P04825) Aminopeptidase N from E. coli (869 aa). FASTA: opt: 2226 Z-score: 2532.9 E(): 3.4e-133 Smith-Waterman score: 2751; 48.856identity in 874 aa overlap; aminopeptidase N complement(1879650..1882244) Francisella tularensis subsp. tularensis FSC198 4199240 YP_667811.1 CDS FTF1794 NC_008245.1 1882428 1882856 D Similar to Q9WYK7 Heat shock protein, class I from Thermatoga maritima (147 aa). FASTA: opt: 288 Z-score: 346.4 E(): 2.1e-11 Smith-Waterman score: 288; 37.879 identity in 132 aa overlap ORF ftt1794; heat shock protein 1882428..1882856 Francisella tularensis subsp. tularensis FSC198 4199993 YP_667812.1 CDS trpC NC_008245.1 1882853 1884214 R monomeric bifunctional protein; functions in tryptophan biosynthesis pathway; phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate; bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase complement(1882853..1884214) Francisella tularensis subsp. tularensis FSC198 4200718 YP_667813.1 CDS FTF1796c NC_008245.1 1884305 1884718 R Similar to Q9KF27 Hypothetical protein BH0670 from Bacillus halodurans (159 aa). FASTA: opt: 208 Z-score: 278.0 E(): 1.4e-07 Smith-Waterman score: 208; 28.682 identity in 129 aa overlap ORF ftt1796c; hypothetical protein complement(1884305..1884718) Francisella tularensis subsp. tularensis FSC198 4199994 YP_667814.1 CDS msrA2 NC_008245.1 1884723 1885412 R Similar to MSA2_CAUCR (Q9A9E9) Peptide methionine sulfoxide reductase from Caulobacter crescentus (196 aa). FASTA opt: 510 Z-score: 598.2 E(): 2e-25 Smith-Waterman score: 510; 39.024 identity in 205 aa overlap; peptide methionine sulfoxide reductase MsrA complement(1884723..1885412) Francisella tularensis subsp. tularensis FSC198 4200101 YP_667815.1 CDS FTF1798c NC_008245.1 1885496 1885864 R ORF ftt1798c; hypothetical protein complement(1885496..1885864) Francisella tularensis subsp. tularensis FSC198 4199995 YP_667816.1 CDS FTF1800c NC_008245.1 1886267 1886719 R ORF ftt1800c; hypothetical protein complement(1886267..1886719) Francisella tularensis subsp. tularensis FSC198 4199997 YP_667817.1 CDS trpE NC_008245.1 1888373 1889917 R with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I complement(1888373..1889917) Francisella tularensis subsp. tularensis FSC198 4200719 YP_667818.1 CDS trpR NC_008245.1 1889926 1890213 R Similar to TRPR_ECOLI (P03032) Trp operon repressor from E. coli (107 aa). FASTA: opt: 175 Z-score: 239.1 E(): 2e-05 Smith-Waterman score: 175; 32.584 identity in 89 aa overlap; trp operon repressor complement(1889926..1890213) Francisella tularensis subsp. tularensis FSC198 4200722 YP_667819.1 CDS rng NC_008245.1 1890687 1892183 R Similar to RNG_ECOLI (P25537) Ribonuclease G from E. coli (488 aa). FASTA: opt: 1439 Z-score: 1642.1 E(): 1.4e-83 Smith-Waterman score: 1439; 45.418 identity in 491 aa overlap; ribonuclease G complement(1890687..1892183) Francisella tularensis subsp. tularensis FSC198 4200765 FTFt01 tRNA FTFt01 NC_008245.1 48587 48660 D tRNA-Met 48587..48660 Francisella tularensis subsp. tularensis FSC198 4199454 FTFt02 tRNA FTFt02 NC_008245.1 84535 84617 D tRNA-Leu 84535..84617 Francisella tularensis subsp. tularensis FSC198 4199450 FTFt03 tRNA FTFt03 NC_008245.1 149754 149835 D tRNA-Tyr 149754..149835 Francisella tularensis subsp. tularensis FSC198 4200712 FTFt04 tRNA FTFt04 NC_008245.1 149840 149910 D tRNA-Gly 149840..149910 Francisella tularensis subsp. tularensis FSC198 4199444 FTFt05 tRNA FTFt05 NC_008245.1 149942 150014 D tRNA-Thr 149942..150014 Francisella tularensis subsp. tularensis FSC198 4200709 FTFt06 tRNA FTFt06 NC_008245.1 151266 151341 D tRNA-Trp 151266..151341 Francisella tularensis subsp. tularensis FSC198 4200711 FTFt07 tRNA FTFt07 NC_008245.1 287069 287143 D tRNA-Gln 287069..287143 Francisella tularensis subsp. tularensis FSC198 4199440 FTFt08 tRNA FTFt08 NC_008245.1 326575 326650 D tRNA-Glu 326575..326650 Francisella tularensis subsp. tularensis FSC198 4199441 FTFt09 tRNA FTFt09 NC_008245.1 722196 722268 D tRNA-Val 722196..722268 Francisella tularensis subsp. tularensis FSC198 4200714 FTFt10 tRNA FTFt10 NC_008245.1 774909 774993 R tRNA-Ser complement(774909..774993) Francisella tularensis subsp. tularensis FSC198 4200708 FTFt11 tRNA FTFt11 NC_008245.1 822845 822920 D tRNA-Phe 822845..822920 Francisella tularensis subsp. tularensis FSC198 4199457 FTFt12 tRNA FTFt12 NC_008245.1 822938 823014 D tRNA-Pro 822938..823014 Francisella tularensis subsp. tularensis FSC198 4199458 FTFt13 tRNA FTFt13 NC_008245.1 823023 823099 D tRNA-Arg 823023..823099 Francisella tularensis subsp. tularensis FSC198 4199871 FTFt14 tRNA FTFt14 NC_008245.1 823127 823199 D tRNA-His 823127..823199 Francisella tularensis subsp. tularensis FSC198 4199445 FTFt15 tRNA FTFt15 NC_008245.1 823209 823291 D tRNA-Leu 823209..823291 Francisella tularensis subsp. tularensis FSC198 4199452 FTFt16 tRNA FTFt16 NC_008245.1 864804 864890 D tRNA-Ser 864804..864890 Francisella tularensis subsp. tularensis FSC198 4200707 FTFt17 tRNA FTFt17 NC_008245.1 932641 932714 R tRNA-Val complement(932641..932714) Francisella tularensis subsp. tularensis FSC198 4200713 FTFt18 tRNA FTFt18 NC_008245.1 1310489 1310564 R tRNA-Ala complement(1310489..1310564) Francisella tularensis subsp. tularensis FSC198 4199866 FTFt19 tRNA FTFt19 NC_008245.1 1310582 1310655 R tRNA-Ile complement(1310582..1310655) Francisella tularensis subsp. tularensis FSC198 4199446 FTFt20 tRNA FTFt20 NC_008245.1 1313494 1313569 R tRNA-Val complement(1313494..1313569) Francisella tularensis subsp. tularensis FSC198 4200715 FTFt21 tRNA FTFt21 NC_008245.1 1313597 1313688 R tRNA-Ser complement(1313597..1313688) Francisella tularensis subsp. tularensis FSC198 4199459 FTFt22 tRNA FTFt22 NC_008245.1 1353783 1353858 R tRNA-Lys complement(1353783..1353858) Francisella tularensis subsp. tularensis FSC198 4199453 FTFt23 tRNA FTFt23 NC_008245.1 1377608 1377683 R tRNA-Ala complement(1377608..1377683) Francisella tularensis subsp. tularensis FSC198 4199867 FTFt24 tRNA FTFt24 NC_008245.1 1377701 1377774 R tRNA-Ile complement(1377701..1377774) Francisella tularensis subsp. tularensis FSC198 4199447 FTFt25 tRNA FTFt25 NC_008245.1 1451788 1451876 R tRNA-Leu complement(1451788..1451876) Francisella tularensis subsp. tularensis FSC198 4199451 FTFt26 tRNA FTFt26 NC_008245.1 1451882 1451955 R tRNA-Cys complement(1451882..1451955) Francisella tularensis subsp. tularensis FSC198 4199874 FTFt27 tRNA FTFt27 NC_008245.1 1451974 1452045 R tRNA-Gly complement(1451974..1452045) Francisella tularensis subsp. tularensis FSC198 4199443 FTFt28 tRNA FTFt28 NC_008245.1 1459298 1459370 D tRNA-Asn 1459298..1459370 Francisella tularensis subsp. tularensis FSC198 4199872 FTFt29 tRNA FTFt29 NC_008245.1 1488520 1488606 R tRNA-Leu complement(1488520..1488606) Francisella tularensis subsp. tularensis FSC198 4199449 FTFt30 tRNA FTFt30 NC_008245.1 1540957 1541033 D tRNA-Arg 1540957..1541033 Francisella tularensis subsp. tularensis FSC198 4199869 FTFt31 tRNA FTFt31 NC_008245.1 1541048 1541119 D tRNA-Gly 1541048..1541119 Francisella tularensis subsp. tularensis FSC198 4199442 FTFt32 tRNA FTFt32 NC_008245.1 1626589 1626665 D tRNA-Met 1626589..1626665 Francisella tularensis subsp. tularensis FSC198 4199455 FTFt33 tRNA FTFt33 NC_008245.1 1706031 1706104 D tRNA-Met 1706031..1706104 Francisella tularensis subsp. tularensis FSC198 4199456 FTFt34 tRNA FTFt34 NC_008245.1 1763008 1763083 R tRNA-Arg complement(1763008..1763083) Francisella tularensis subsp. tularensis FSC198 4199870 FTFt35 tRNA FTFt35 NC_008245.1 1770943 1771018 R tRNA-Ala complement(1770943..1771018) Francisella tularensis subsp. tularensis FSC198 4199868 FTFt36 tRNA FTFt36 NC_008245.1 1771036 1771109 R tRNA-Ile complement(1771036..1771109) Francisella tularensis subsp. tularensis FSC198 4199448 FTFt37 tRNA FTFt37 NC_008245.1 1890470 1890546 R tRNA-Asp complement(1890470..1890546) Francisella tularensis subsp. tularensis FSC198 4199873 FTFt38 tRNA FTFt38 NC_008245.1 1890551 1890626 R tRNA-Thr complement(1890551..1890626) Francisella tularensis subsp. tularensis FSC198 4200710 FTFr01 rRNA FTFr01 NC_008245.1 408789 408911 D 5S ribosomal RNA 408789..408911 Francisella tularensis subsp. tularensis FSC198 4200004 FTFr02 rRNA FTFr02 NC_008245.1 1307389 1307505 R 5S ribosomal RNA complement(1307389..1307505) Francisella tularensis subsp. tularensis FSC198 4200005 FTFr03 rRNA FTFr03 NC_008245.1 1307550 1310415 R 23S ribosomal RNA complement(1307550..1310415) Francisella tularensis subsp. tularensis FSC198 4200001 FTFr04 rRNA FTFr04 NC_008245.1 1310748 1312277 R 16S ribosomal RNA complement(1310748..1312277) Francisella tularensis subsp. tularensis FSC198 4199998 FTFr05 rRNA FTFr05 NC_008245.1 1374508 1374624 R 5S ribosomal RNA complement(1374508..1374624) Francisella tularensis subsp. tularensis FSC198 4199743 FTFr06 rRNA FTFr06 NC_008245.1 1374669 1377534 R 23S ribosomal RNA complement(1374669..1377534) Francisella tularensis subsp. tularensis FSC198 4200002 FTFr07 rRNA FTFr07 NC_008245.1 1377867 1379396 R 16S ribosomal RNA complement(1377867..1379396) Francisella tularensis subsp. tularensis FSC198 4199999 FTFr08 rRNA FTFr08 NC_008245.1 1767843 1767959 R 5S ribosomal RNA complement(1767843..1767959) Francisella tularensis subsp. tularensis FSC198 4199744 FTFr09 rRNA FTFr09 NC_008245.1 1768004 1770869 R 23S ribosomal RNA complement(1768004..1770869) Francisella tularensis subsp. tularensis FSC198 4200003 FTFr10 rRNA FTFr10 NC_008245.1 1771202 1772731 R 16S ribosomal RNA complement(1771202..1772731) Francisella tularensis subsp. tularensis FSC198 4200000