-- dump date 20140619_101700 -- class Genbank::CDS -- table cds_note -- id note YP_002941922.1 PFAM: integrase family protein; KEGG: bay:RBAM_018520 phage integrase family site specific recombinase YP_002941923.1 KEGG: gka:GKP04 replication protein YP_002941924.1 TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: bca:BCE_4605 DNA-cytosine methyltransferase family protein YP_002941925.1 KEGG: bca:BCE_4604 type II restriction endonuclease, putative YP_002941927.1 KEGG: hypothetical protein YP_002941929.1 KEGG: gtn:GTNG_3462 putative DNA binding protein YP_002948209.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself. YP_002948210.1 binds the polymerase to DNA and acts as a sliding clamp YP_002948211.1 TIGRFAM: S4 domain protein YaaA; KEGG: gka:GK0003 hypothetical protein YP_002948212.1 Required for DNA replication; binds preferentially to single-stranded, linear DNA YP_002948213.1 negatively supercoils closed circular double-stranded DNA YP_002948214.1 negatively supercoils closed circular double-stranded DNA YP_002948215.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: gka:GK0007 hypothetical protein YP_002948216.1 KEGG: gtn:GTNG_0008 YaaC YP_002948217.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate YP_002948218.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; beta-lactamase; Penicillin-binding protein 5 domain protein; KEGG: gka:GK0010 serine-type D-Ala-D-Ala carboxypeptidase YP_002948219.1 with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate YP_002948220.1 with PdxST is involved in the biosynthesis of pyridoxal 5'-phosphate; PdxT catalyzes the hydrolysis of glutamine to glutamate and ammonia; PdxS utilizes the ammonia to synthesize pyridoxal 5'-phosphate YP_002948222.1 KEGG: gtn:GTNG_0013 seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like YP_002948223.1 PFAM: deoxynucleoside kinase; KEGG: afl:Aflv_0014 deoxyadenosine/deoxycytidine kinase YP_002948224.1 PFAM: deoxynucleoside kinase; KEGG: afl:Aflv_0015 deoxyguanosine kinase YP_002948225.1 PFAM: glycoside hydrolase family 18; peptidoglycan-binding LysM; SMART: chitinase II; peptidoglycan-binding LysM; KEGG: gtn:GTNG_0014 spore peptidoglycan hydrolase, N-acetylglucosaminidase YP_002948226.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: gtn:GTNG_0015 cytosine deaminase YP_002948227.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA YP_002948228.1 PFAM: conserved hypothetical protein; KEGG: gka:GK0018 hypothetical protein YP_002948229.1 involved in a recombinational process of DNA repair, independent of the recBC complex YP_002948230.1 KEGG: gtn:GTNG_0019 hypothetical cytosolic protein YP_002948231.1 TIGRFAM: pro-sigmaK processing inhibitor BofA; PFAM: sigmaK-factor processing regulatory BofA; KEGG: gtn:GTNG_0020 inhibitor of the pro-sigma K processing machinery YP_002948232.1 KEGG: gka:GK0022 hypothetical protein YP_002948233.1 PFAM: Orn/Lys/Arg decarboxylase major region; Soluble liver antigen/liver pancreas antigen; Orn/Lys/Arg decarboxylase domain protein; aminotransferase class I and II; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: gtn:GTNG_0022 lysine decarboxylase-like protein YP_002948234.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP) YP_002948235.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the subunit beta on the DNA YP_002948236.1 PFAM: PSP1 domain protein; KEGG: gtn:GTNG_0025 signal peptidase II YP_002948237.1 in Bacillus subtilis this protein is involved in the negative regulation of DNA replication initiation; interacts with DnaN and DnaA YP_002948238.1 PFAM: methyltransferase small; RNA methylase; KEGG: gtn:GTNG_0027 methyltransferase YP_002948239.1 PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: gtn:GTNG_0028 corrin/porphyrin methyltransferase YP_002948240.1 TIGRFAM: AbrB family transcriptional regulator; PFAM: SpoVT/AbrB domain protein; KEGG: gtn:GTNG_0029 transition state regulator YP_002948241.1 TIGRFAM: methionyl-tRNA synthetase; methionyl-tRNA synthetase subunit beta; PFAM: tRNA synthetase class I (M); t-RNA-binding domain protein; KEGG: gtn:GTNG_0030 methionine-tRNA ligase/methionyl-tRNA synthetase YP_002948242.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: gtn:GTNG_0031 deoxyribonuclease TatD family YP_002948243.1 PFAM: 3D domain protein; protein of unknown function DUF348; G5 domain protein; KEGG: gtn:GTNG_0032 hypothetical protein YP_002948244.1 KEGG: gka:GK0034 hypothetical protein; TIGRFAM: primase/topoisomerase like protein; PFAM: TOPRIM domain protein; SMART: Toprim sub domain protein YP_002948245.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin YP_002948246.1 TIGRFAM: sporulation peptidase YabG; PFAM: peptidase U57 YabG; KEGG: gtn:GTNG_0036 sporulation-specific protease YabG YP_002948247.1 PFAM: protein of unknown function DUF1021; KEGG: gtn:GTNG_0037 hypothetical protein YP_002948248.1 KEGG: gtn:GTNG_0038 small acid-soluble spore protein, minoralpha/beta-type SASP YP_002948249.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis YP_002948250.1 TIGRFAM: pur operon repressor; PFAM: purine repressor ; phosphoribosyltransferase; KEGG: gka:GK0040 purine operon repressor YP_002948251.1 TIGRFAM: endoribonuclease L-PSP; PFAM: endoribonuclease L-PSP; KEGG: gka:GK0041 translation initiation inhibitor YP_002948252.1 stage V sporulation protein G; essential for spore formation and a negative regulator of asymmetric septation in Bacillus; involved in methicillin-resistance, biofilm formation and capsular polysaccharide synthesis in Staphylococcus YP_002948253.1 forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis YP_002948254.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP YP_002948255.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response YP_002948256.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation YP_002948257.1 KEGG: gtn:GTNG_0047 hypothetical protein YP_002948258.1 KEGG: gtn:GTNG_0048 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: transcription factor CarD; helicase; DEAD/DEAH box helicase; TRCF domain protein; type III restriction protein res subunit; SMART: DEAD-like helicases ; helicase YP_002948259.1 TIGRFAM: stage V sporulation protein T; transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: gtn:GTNG_0049 stage V sporulation protein T YP_002948260.1 PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: gtn:GTNG_0050 stage V sporulation protein B-like protein YP_002948261.1 TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: gtn:GTNG_0051 tetrapyrrole methylase family protein, MazG family protein YP_002948262.1 PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: gtn:GTNG_0052 heat shock protein 15 YP_002948263.1 TIGRFAM: sporulation protein YabP; PFAM: YabP family protein; KEGG: gka:GK0053 hypothetical protein YP_002948264.1 TIGRFAM: spore cortex biosynthesis protein YabQ; KEGG: gtn:GTNG_0054 spore cortex biosynthesis protein YP_002948265.1 PFAM: septum formation initiator; KEGG: gtn:GTNG_0055 cell-division initiation protein YP_002948266.1 PFAM: RNA binding S1 domain protein; SMART: RNA binding S1 domain protein; KEGG: gka:GK0056 hypothetical protein YP_002948267.1 KEGG: gtn:GTNG_0057 serine phosphatase; TIGRFAM: stage II sporulation protein E; PFAM: stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein YP_002948268.1 KEGG: gka:GK0058 hypothetical protein YP_002948269.1 SMART: serine/threonine protein kinase; KEGG: gka:GK0059 serine/threonine protein kinase YP_002948270.1 TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; protein of unkown function DUF1946 PP-loop ATpase; KEGG: gtn:GTNG_0060 cell cycle protein MesJ YP_002948271.1 KEGG: gtn:GTNG_0061 hypoxanthine-guanine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_002948272.1 KEGG: gka:GK0062 cell-division protein and general stress protein (class III heat-shock); TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; peptidase M41 FtsH extracellular; ATPase AAA central domain protein; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA YP_002948273.1 type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP YP_002948274.1 becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers YP_002948275.1 TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta; KEGG: gka:GK0065 cysteine synthase(O-acetyl-L-serine sulfhydrylase) YP_002948276.1 PFAM: transposase IS4 family protein; KEGG: npu:Npun_BR216 hypothetical protein YP_002948277.1 TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: gtn:GTNG_0067 para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II YP_002948278.1 catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate YP_002948279.1 KEGG: gtn:GTNG_0069 dihydropteroate synthase, dihydropteroatepyrophosphorylase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS YP_002948280.1 KEGG: gtn:GTNG_0070 dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; PFAM: dihydroneopterin aldolase YP_002948281.1 KEGG: gtn:GTNG_0071 2-amino-4-hydroxy-6- hydroxymethyldihydropteridinepyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK YP_002948282.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: gka:GK0072 hypothetical protein YP_002948283.1 PFAM: transposase IS4 family protein; KEGG: npu:Npun_BR216 hypothetical protein YP_002948284.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1 YP_002948285.1 PFAM: transposase IS4 family protein; KEGG: gka:GK2942 hypothetical protein YP_002948286.1 PFAM: Firmicute transcriptional repressor of class III stress genes; KEGG: gka:GK0075 transcriptional regulator YP_002948287.1 PFAM: UvrB/UvrC protein; KEGG: gka:GK0076 hypothetical protein YP_002948288.1 PFAM: ATP:guanido phosphotransferase; KEGG: gka:GK0077 ATP:guanido phosphotransferase YP_002948289.1 PFAM: ATPase AAA; ATPase AAA central domain protein; UvrB/UvrC protein; Torsin; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: ATPase AAA; KEGG: gtn:GTNG_0078 negative regulator of genetic competence ClpC/MecB YP_002948290.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents YP_002948291.1 PFAM: PilT protein domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: nucleotide binding protein PINc; KEGG: gka:GK0080 hypothetical protein YP_002948292.1 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers YP_002948293.1 catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate YP_002948294.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation YP_002948295.1 TIGRFAM: serine O-acetyltransferase; KEGG: gtn:GTNG_0084 serine acetyltransferase YP_002948296.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA YP_002948297.1 PFAM: ribonuclease III; SMART: ribonuclease III; KEGG: gka:GK0086 hypothetical protein YP_002948298.1 TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: gka:GK0087 tRNA/rRNA methyltransferase YP_002948299.1 PFAM: protein of unknown function DUF901; KEGG: gtn:GTNG_0088 hypothetical cytosolic protein YP_002948300.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates YP_002948301.1 TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33; KEGG: afl:Aflv_0089 ribosomal protein L33 YP_002948302.1 forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force YP_002948303.1 Modulates Rho-dependent transcription termination YP_002948304.1 binds directly to 23S ribosomal RNA YP_002948305.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA YP_002948306.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit YP_002948307.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors YP_002948308.1 PFAM: methyltransferase small; methyltransferase type 12; KEGG: gtn:GTNG_0097 16S rRNA m(2)G 1207 methyltransferase YP_002948309.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; subunit beta is part of the catalytic core which binds with a sigma factor to produce the holoenzyme YP_002948310.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter YP_002948311.1 in Bacillus subtilis this non-essential protein associates with the ribosome YP_002948312.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance YP_002948313.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit YP_002948314.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene YP_002948315.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu YP_002948316.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex YP_002948317.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin YP_002948318.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA YP_002948319.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel YP_002948320.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation YP_002948321.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA YP_002948322.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center YP_002948323.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation YP_002948324.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e YP_002948325.1 one of the stabilizing components for the large ribosomal subunit YP_002948326.1 primary binding protein; helps mediate assembly; involved in translation fidelity YP_002948327.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase YP_002948328.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel YP_002948329.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13 YP_002948330.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif YP_002948331.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit YP_002948332.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance YP_002948333.1 binds 5S rRNA along with protein L5 and L25 YP_002948334.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance YP_002948335.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7 YP_002948336.1 late assembly protein YP_002948337.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase YP_002948338.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP YP_002948339.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn YP_002948340.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3 YP_002948341.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif YP_002948342.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA YP_002948343.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3 YP_002948344.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme YP_002948345.1 is a component of the macrolide binding site in the peptidyl transferase center YP_002948346.1 with CbiNQ forms the ABC transporter for cobalt import; Bacillus spp. have two adjacent copies of this gene YP_002948347.1 with CbiNQ forms the ABC transporter for cobalt import; Bacillus spp. have two adjacent copies of this gene YP_002948348.1 PFAM: cobalt transporter; KEGG: gtn:GTNG_0135 cobalt transporter CbiQ-like protein YP_002948349.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability YP_002948350.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit YP_002948351.1 forms a direct contact with the tRNA during translation YP_002948352.1 KEGG: gtn:GTNG_0139 hypothetical cytosolic protein YP_002948353.1 KEGG: gtn:GTNG_0140 N-acetylmuramoyl-L-alanine amidase; TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin YP_002948354.1 KEGG: gka:GK0143 ATPase involved in chromosome partitioning YP_002948355.1 KEGG: gtn:GTNG_0142 spore germination protein GerD YP_002948356.1 KEGG: gka:GK0147 KinB signaling pathway activation protein YP_002948357.1 TIGRFAM: polysaccharide deacetylase family sporulation protein PdaB; PFAM: polysaccharide deacetylase; KEGG: gtn:GTNG_0144 polysaccharide deacetylase YP_002948358.1 TIGRFAM: arginase; PFAM: arginase/agmatinase/formiminoglutamase; KEGG: gtn:GTNG_0145 arginase YP_002948359.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription: this protein is involved in detoxification and protection against antimicrobial YP_002948360.1 KEGG: gtn:GTNG_0148 hypothetical protein YP_002948361.1 PFAM: protein of unknown function DUF147; KEGG: gka:GK0152 hypothetical protein YP_002948362.1 PFAM: YbbR family protein; KEGG: gka:GK0153 hypothetical protein YP_002948363.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate YP_002948364.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source YP_002948365.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: gtn:GTNG_0153 hypothetical protein YP_002948366.1 PFAM: transposase mutator type; KEGG: gtn:GTNG_0322 transposase (04) YP_002948367.1 TIGRFAM: transposase, IS605 OrfB family; transposase; PFAM: transposase IS605 OrfB; KEGG: noc:Noc_2686 transposase YP_002948368.1 PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: afl:Aflv_2104 transposase YP_002948369.1 KEGG: bph:Bphy_2122 hypothetical protein YP_002948370.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: tpd:Teth39_0165 integral membrane sensor signal transduction histidine kinase YP_002948371.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: cth:Cthe_1288 two component transcriptional regulator YP_002948372.1 TIGRFAM: transposase, IS605 OrfB family; transposase; PFAM: transposase IS605 OrfB; KEGG: noc:Noc_2686 transposase YP_002948373.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: gtn:GTNG_0408 YoaV YP_002948374.1 KEGG: gtn:GTNG_1177 hypothetical protein YP_002948375.1 KEGG: dsy:DSY4503 hypothetical protein YP_002948376.1 PFAM: transcriptional regulator PadR family protein; KEGG: bha:BH0406 hypothetical protein YP_002948377.1 KEGG: bha:BH0407 hypothetical protein YP_002948378.1 PFAM: DSBA oxidoreductase; KEGG: gka:GK0202 protein-disulfide isomerase YP_002948379.1 PFAM: DinB family protein; KEGG: gka:GK0203 hypothetical protein YP_002948380.1 KEGG: gka:GK0209 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin YP_002948381.1 PFAM: sulfatase; KEGG: gka:GK0211 sulfatase YP_002948382.1 TIGRFAM: sporulation protein YtaF; PFAM: protein of unknown function DUF204; KEGG: gka:GK0214 hypothetical protein YP_002948383.1 PFAM: SpoOM family protein; KEGG: gka:GK0215 sporulation-control protein YP_002948384.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell YP_002948385.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: afl:Aflv_2809 DNA-binding response regulator, NarL family (REC-HTH domains) YP_002948386.1 PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: afl:Aflv_2808 signal transduction histidine kinase YP_002948387.1 PFAM: transposase IS200-family protein; KEGG: amt:Amet_3817 transposase IS200-family protein YP_002948388.1 KEGG: afl:Aflv_2013 transposase; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB YP_002948389.1 KEGG: afl:Aflv_2813 hypothetical protein YP_002948390.1 KEGG: afl:Aflv_2812 membrane protein, predicted permease YP_002948391.1 PFAM: transposase IS66; KEGG: gka:GK2663 transposase YP_002948392.1 KEGG: afl:Aflv_2812 membrane protein, predicted permease YP_002948393.1 KEGG: afl:Aflv_2811 membrane protein, predicted permease YP_002948394.1 PFAM: integrase catalytic region; KEGG: gka:GK0167 transposase of IS653-like element YP_002948395.1 KEGG: dsy:DSY1060 hypothetical protein YP_002948396.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis YP_002948397.1 PFAM: polysaccharide deacetylase; KEGG: gka:GK0220 chitooligosaccharide deacetylase YP_002948398.1 PFAM: hypothetical protein; KEGG: gtn:GTNG_0196 alkaline phosphatase like protein YP_002948399.1 PFAM: monogalactosyldiacylglycerol synthase; KEGG: gtn:GTNG_0197 alkaline phosphatase like protein YP_002948400.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli YP_002948401.1 TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: gtn:GTNG_0199 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D -alanyl ligase YP_002948402.1 KEGG: gka:GK0225 carboxylesterase precursor YP_002948403.1 PFAM: DEAD/DEAH box helicase; helicase domain protein; SMART: DEAD-like helicases ; helicase; KEGG: gka:GK0226 ATP-dependent RNA helicase YP_002948404.1 PFAM: rhomboid family protein; KEGG: gtn:GTNG_0202 hypothetical protein YP_002948405.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids YP_002948406.1 KEGG: gtn:GTNG_0204 hypothetical protein YP_002948407.1 KEGG: gtn:GTNG_0205 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein YP_002948408.1 KEGG: gka:GK0232 hypothetical protein YP_002948409.1 PFAM: PemK family protein; KEGG: afl:Aflv_0199 toxin-antitoxin addiction module toxin component MazF (an endoRNAse) YP_002948410.1 PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; RNA binding S1 domain protein; KEGG: gtn:GTNG_0209 S1 RNA binding domain protein YP_002948411.1 KEGG: afl:Aflv_0201 hypothetical protein YP_002948412.1 PFAM: protein of unknown function DUF335 SprT; SMART: protein of unknown function SprT; KEGG: gtn:GTNG_0210 hypothetical protein YP_002948413.1 PFAM: protein of unknown function UPF0079; KEGG: gtn:GTNG_0211 ATP/GTP hydrolase YP_002948414.1 PFAM: peptidase M22 glycoprotease; KEGG: gka:GK0237 glycoprotein endopeptidase YP_002948415.1 TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: gtn:GTNG_0213 ribosomal-protein-alanine acetyltransferase YP_002948416.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity YP_002948417.1 PFAM: transposase IS66; KEGG: gka:GK2663 transposase YP_002948418.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; transposase IS891/IS1136/IS1341 family; KEGG: gka:GK2338 transposase YP_002948419.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gtn:GTNG_0215 ABC transporter ATP-binding protein Uup YP_002948420.1 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis YP_002948421.1 modulates transcription in response to the NADH/NAD(+) redox state YP_002948422.1 PFAM: transposase IS4 family protein; KEGG: gka:GK2942 hypothetical protein YP_002948423.1 TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: gtn:GTNG_0218 component of the twin-arginine pre-protein translocation pathway YP_002948424.1 TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: gka:GK0244 hypothetical protein YP_002948425.1 KEGG: btk:BT9727_0236 hypothetical protein YP_002948426.1 PFAM: hypothetical protein; KEGG: gka:GK0246 hypothetical protein YP_002948427.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring YP_002948428.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth YP_002948429.1 PFAM: sodium/hydrogen exchanger; KEGG: gtn:GTNG_0224 Na+/H+ antiporter NapA-like protein YP_002948430.1 PFAM: TrkA-C domain protein; KEGG: gtn:GTNG_0225 TrkA domain protein YP_002948431.1 TIGRFAM: transposase, IS605 OrfB family; transposase; PFAM: transposase IS605 OrfB; KEGG: noc:Noc_2686 transposase YP_002948432.1 PFAM: transglutaminase; SMART: transglutaminase; KEGG: gka:GK0253 hypothetical protein YP_002948433.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway YP_002948434.1 PFAM: xanthine/uracil/vitamin C permease; KEGG: gka:GK0255 hypothetical protein YP_002948435.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gtn:GTNG_0235 ribosomal-protein-serine acetyltransferase YP_002948436.1 KEGG: gtn:GTNG_0271 SpaI YP_002948437.1 KEGG: gka:GK0310 lantibiotic ABC transporter permease YP_002948438.1 KEGG: gka:GK0311 lantibiotic ABC transporter permease YP_002948439.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK0312 lantibiotic ABC transporter ATP-binding protein YP_002948440.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: gtn:GTNG_0269 subtilin biosynthesis regulatory protein SpaR YP_002948441.1 KEGG: gka:GK0307 lantibiotic biosynthesis protein (sensory transduction protein kinase) YP_002948442.1 PFAM: transposase IS4 family protein; KEGG: drm:Dred_2628 transposase, IS4 family protein YP_002948443.1 KEGG: gka:GK3302 transposase YP_002948444.1 PFAM: protein of unknown function UPF0236; KEGG: gka:GK1720 hypothetical protein YP_002948445.1 PFAM: transposase IS4 family protein; KEGG: gka:GK3310 transposase YP_002948446.1 PFAM: heat shock protein Hsp20; KEGG: gka:GK0256 small heat shock protein YP_002948447.1 PFAM: transposase IS4 family protein; KEGG: gka:GK2942 hypothetical protein YP_002948448.1 KEGG: gtn:GTNG_0237 phosphoribosylaminoimidazole carboxylase I; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase YP_002948449.1 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway YP_002948450.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide YP_002948451.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase YP_002948452.1 With PurL and PurQ catalyzes the conversion of formylglycinamide ribonucleotide, ATP, and glutamine to formylglycinamidine ribonucleotide, ADP, and glutamate in the fourth step of the purine biosynthetic pathway YP_002948453.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis YP_002948454.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis YP_002948455.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway YP_002948456.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis YP_002948457.1 glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate YP_002948458.1 involved in de novo purine biosynthesis YP_002948459.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis YP_002948460.1 KEGG: gtn:GTNG_0249 hypothetical protein YP_002948461.1 PFAM: amidohydrolase; KEGG: gtn:GTNG_0250 adenine deaminase YP_002948462.1 KEGG: gtn:GTNG_0251 hypothetical protein YP_002948463.1 TIGRFAM: TrpR like protein, YerC/YecD; PFAM: Trp repressor; KEGG: gka:GK0273 hypothetical protein YP_002948464.1 PcrB-like protein; GGGP synthase; member of prenyltransferases that transfer isoprenoid groups to nonisoprenoid acceptors; functions in form GGGP from glycerol-1-phosphate (G-1-P) and geranylgeranyl pyrophosphate (GGPP); important in lipid metabolism and especially important as the ether linkages in archaea are different than those in bacteria; GGGP synthase lies at the branch point for membrane lipid biosynthesis; cytosolic; T acidophilum protein acts as a homodimer while M thermoautotrophicum protein has been reported to function as a pentamer YP_002948465.1 TIGRFAM: ATP-dependent DNA helicase PcrA; PFAM: UvrD/REP helicase; KEGG: gtn:GTNG_0255 ATP-dependent DNA helicase YP_002948466.1 this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB YP_002948467.1 PFAM: CamS sex pheromone cAM373 family protein; KEGG: gka:GK0277 hypothetical protein YP_002948468.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; transposase IS891/IS1136/IS1341 family; KEGG: gka:GK2338 transposase YP_002948469.1 catalyzes the conversion of 1-proline-5-carboxylate dehydrogenase to L-glutamate YP_002948470.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: bwe:BcerKBAB4_4703 MerR family transcriptional regulator YP_002948471.1 PFAM: ABC transporter; ABC transporter transmembrane region; SMART: ATPase AAA; KEGG: btl:BALH_1731 multidrug resistance ABC transporter ATP-binding and permease YP_002948472.1 PFAM: Erythromycin esterase; KEGG: lsp:Bsph_4494 erythromycin esterase-like protein YP_002948474.1 regulates expression of hut operon by antitermination mechanism; forms a homohexamer; binds both magnesium and L-histidine and then binds RNA sequences within the terminator region and destabilizes the terminator structure YP_002948475.1 catalyzes the degradation of histidine to urocanate and ammmonia YP_002948476.1 KEGG: gka:GK0279 hypothetical protein YP_002948477.1 TIGRFAM: transposase, IS605 OrfB family; transposase; PFAM: transposase IS605 OrfB; KEGG: noc:Noc_2686 transposase YP_002948478.1 KEGG: gka:GK1414 hypothetical protein YP_002948479.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain YP_002948480.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA YP_002948481.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA YP_002948482.1 TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: bha:BH2937 immunogenic protein YP_002948483.1 TIGRFAM: TRAP transporter 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transporter permease DctM subunit; citrate transporter; KEGG: bha:BH2938 hypothetical protein YP_002948484.1 PFAM: aminotransferase class-III; KEGG: bha:BH2941 glutamate-1-semialdehyde 2,1-aminomutase YP_002948485.1 PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: bha:BH2940 hypothetical protein YP_002948486.1 KEGG: gtn:GTNG_0422 hypothetical protein YP_002948487.1 KEGG: gtn:GTNG_0423 hypothetical protein YP_002948488.1 KEGG: gtn:GTNG_3214 hypothetical protein YP_002948489.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gtn:GTNG_0275 glycine betaine/L-proline ABC transporter (permease) YP_002948490.1 KEGG: gka:GK0314 glycine betaine/carnitine/choline ABC transporter ATP-binding protein; TIGRFAM: glycine betaine/L-proline ABC transporter ATPase; PFAM: ABC transporter; hypothetical protein; SMART: ATPase AAA; hypothetical protein YP_002948491.1 PFAM: substrate-binding region of ABC-type glycine betaine transporter; KEGG: gka:GK0315 hypothetical protein YP_002948492.1 KEGG: gka:GK0316 coiled-coil protein YP_002948493.1 KEGG: afl:Aflv_0267 hypothetical protein YP_002948494.1 KEGG: afl:Aflv_0268 hypothetical protein YP_002948495.1 KEGG: afl:Aflv_0269 predicted ATPase YP_002948496.1 KEGG: afl:Aflv_0270 DNA topoisomerase IV subunit A, contains toprim domain YP_002948497.1 PFAM: peptidase S58 DmpA; KEGG: gka:GK0323 D-aminopeptidase YP_002948498.1 TIGRFAM: CRISPR-associated protein, TM1802 family; CRISPR-associated protein, Csh1 family; KEGG: tpd:Teth39_0122 CRISPR-associated Csh1 family protein YP_002948499.1 TIGRFAM: CRISPR-associated protein, Csh2 family; CRISPR-associated protein, CT1132 family; PFAM: CRISPR-associated protein TM1801; KEGG: mae:Maeo_1072 CRISPR-associated Csh2 family protein YP_002948500.1 TIGRFAM: CRISPR-associated protein Cas5, Hmari subtype; CRISPR-associated protein Cas5; KEGG: tpd:Teth39_0124 CRISPR-associated Cas5 family Hmari subtype protein YP_002948501.1 KEGG: tpd:Teth39_0125 CRISPR-associated helicase Cas3; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated HD domain protein; PFAM: helicase; SMART: helicase YP_002948502.1 TIGRFAM: CRISPR-associated protein Cas4; PFAM: protein of unknown function DUF83; KEGG: dsy:DSY2765 hypothetical protein YP_002948503.1 TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; KEGG: pth:PTH_1914 hypothetical protein YP_002948504.1 TIGRFAM: CRISPR-associated protein Cas2; PFAM: protein of unknown function DUF196; KEGG: tpd:Teth39_0135 CRISPR-associated Cas2 family protein YP_002948505.1 TIGRFAM: CRISPR-associated protein Cas6; PFAM: protein of unknown function DUF57; KEGG: gtn:GTNG_0279 hypothetical protein YP_002948506.1 KEGG: csc:Csac_0050 hypothetical protein YP_002948507.1 TIGRFAM: CRISPR-associated protein, TM1812 family; CRISPR-associated protein DxTHG motif; KEGG: tex:Teth514_1838 CRISPR-associated TM1812 family protein YP_002948508.1 TIGRFAM: CRISPR-associated RAMP protein, Cmr1 family; KEGG: cts:Ctha_0941 CRISPR-associated RAMP protein, Cmr1 family YP_002948509.1 TIGRFAM: CRISPR-associated protein, Crm2 family; KEGG: tte:TTE2639 hydrolase YP_002948510.1 KEGG: cts:Ctha_0946 CRISPR-associated protein, Cmr3 family YP_002948511.1 TIGRFAM: CRISPR-associated RAMP protein, Cmr4 family; PFAM: protein of unknown function DUF324; KEGG: cts:Ctha_0944 CRISPR-associated RAMP protein, Cmr4 family YP_002948512.1 TIGRFAM: CRISPR-associated protein, Cmr5 family; KEGG: cts:Ctha_0943 CRISPR-associated protein, Cmr5 family YP_002948513.1 TIGRFAM: CRISPR-associated RAMP protein, Cmr6 family; PFAM: protein of unknown function DUF324; KEGG: cbf:CLI_2215 CRISPR-associated RAMP Cmr6 family protein YP_002948514.1 KEGG: hypothetical protein YP_002948515.1 KEGG: bce:BC2528 hypothetical protein YP_002948516.1 KEGG: gka:GK0723 spermidine/putrescine ABC transporter ATP-binding protein; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA YP_002948517.1 KEGG: afl:Aflv_2822 spermidine/putrescine transport system permease YP_002948518.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gtn:GTNG_0625 spermidine/putrescine ABC transporter (permease) YP_002948519.1 PFAM: extracellular solute-binding protein family 1; KEGG: gtn:GTNG_0626 spermidine/putrescine ABC transporter spermidine/putrescine-binding protein YP_002948520.1 KEGG: bat:BAS1355 hypothetical protein YP_002948521.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; transposase IS891/IS1136/IS1341 family; KEGG: gka:GK2338 transposase YP_002948522.1 KEGG: hypothetical protein YP_002948523.1 PFAM: transposase IS4 family protein; KEGG: gka:GK2942 hypothetical protein YP_002948524.1 PFAM: transposase mutator type; KEGG: gtn:GTNG_0322 transposase (04) YP_002948525.1 KEGG: gtn:GTNG_0295 hypothetical protein YP_002948526.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: gka:GK0340 epidermal surface antigen YP_002948527.1 similar to YegS from E. coli YP_002948528.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; transposase IS891/IS1136/IS1341 family; KEGG: gka:GK2338 transposase YP_002948529.1 TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; protein of unknown function Met10; (uracil-5)-methyltransferase; KEGG: afl:Aflv_0289 methyltransferase YP_002948530.1 PFAM: recombinase; Resolvase domain; KEGG: gka:GK0884 site-specific recombinase YP_002948532.1 KEGG: bcz:pE33L466_0159 hypothetical protein YP_002948533.1 KEGG: btl:BALH_2211 hypothetical protein YP_002948535.1 TIGRFAM: DNA binding domain protein, excisionase family; PFAM: regulatory protein MerR; KEGG: tpd:Teth39_0091 DNA binding domain-containing protein YP_002948536.1 TIGRFAM: DNA binding domain protein, excisionase family; KEGG: det:DET0882 excisionase family DNA-binding protein YP_002948538.1 PFAM: PemK family protein; KEGG: cbl:CLK_3745 PemK family protein YP_002948539.1 KEGG: hypothetical protein YP_002948540.1 KEGG: gtn:GTNG_2941 hypothetical protein YP_002948542.1 KEGG: bcy:Bcer98_0959 group-specific protein YP_002948543.1 PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: gka:GK3439 transposase YP_002948544.1 PFAM: protein of unknown function DUF181; KEGG: bld:BLi01044 hypothetical protein YP_002948545.1 KEGG: bwe:BcerKBAB4_1162 hypothetical protein YP_002948546.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES; KEGG: lsp:Bsph_3678 sorbitol dehydrogenase YP_002948547.1 TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase; KEGG: afl:Aflv_0332 NUDIX family hydrolase YP_002948548.1 PFAM: type III restriction protein res subunit; helicase domain protein; SMART: DEAD-like helicases ; helicase; KEGG: afl:Aflv_0333 N-terminal HKD family nuclease fused to DNA/RNA helicase domain YP_002948549.1 PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; KEGG: gka:GK0359 dehydrogenase YP_002948550.1 PFAM: nucleotidyl transferase; transferase hexapeptide repeat containing protein; KEGG: gtn:GTNG_0335 nucleoside-diphosphate-sugar pyrophosphorylase YP_002948551.1 PFAM: glycosyl transferase group 1; KEGG: gka:GK0361 hypothetical protein YP_002948552.1 KEGG: gka:GK0362 hypothetical protein YP_002948553.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; KEGG: gka:GK0363 phosphomannomutase YP_002948554.1 KEGG: mba:Mbar_A2182 hypothetical protein YP_002948555.1 PFAM: transposase mutator type; KEGG: gtn:GTNG_0322 transposase (04) YP_002948556.1 PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; KEGG: gka:GK0364 hypothetical protein YP_002948557.1 KEGG: gka:GK0365 hypothetical protein YP_002948558.1 PFAM: sulfate transporter/antisigma-factor antagonist STAS; KEGG: gka:GK0366 anti-sigma factor antagonist YP_002948559.1 KEGG: gtn:GTNG_0342 sigma factor SigB regulation protein RsbU-like protein; TIGRFAM: PAS sensor protein; PFAM: stage II sporulation E family protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: protein phosphatase 2C domain protein; PAC repeat-containing protein; PAS domain containing protein YP_002948560.1 PFAM: RDD domain containing protein; KEGG: gka:GK0368 hypothetical protein YP_002948561.1 KEGG: gtn:GTNG_1264 hypothetical protein YP_002948562.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: gka:GK0369 methyl-accepting chemotaxis protein YP_002948563.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine YP_002948565.1 PFAM: hydantoinase B/oxoprolinase; KEGG: msm:MSMEG_3973 N-methylhydantoinase YP_002948566.1 PFAM: hydantoinase/oxoprolinase; hydantoinaseoxoprolinase domain protein; KEGG: rde:RD1_3584 hydantoin utilization protein A YP_002948567.1 PFAM: aminotransferase class-III; KEGG: bha:BH1035 aminotransferase YP_002948568.1 PFAM: aldehyde dehydrogenase; KEGG: bha:BH0995 succinate-semialdehyde dehydrogenase YP_002948569.1 PFAM: aminotransferase class I and II; KEGG: gka:GK0372 aspartate aminotransferase YP_002948570.1 PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; KEGG: gka:GK0373 acetolactate synthase 2 catalytic subunit YP_002948571.1 PFAM: aldehyde dehydrogenase; KEGG: gka:GK0374 aldehyde dehydrogenase YP_002948572.1 PFAM: saccharopine dehydrogenase; KEGG: gtn:GTNG_0350 L-lysine dehydrogenase YP_002948573.1 KEGG: chy:CHY_0093 hypothetical protein YP_002948574.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: gtn:GTNG_0360 somatin-like protein YP_002948575.1 PFAM: integral membrane protein TerC; KEGG: gtn:GTNG_0364 hypothetical protein YP_002948576.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: gka:GK0387 D-isomer specific 2-hydroxyacid dehydrogenase YP_002948577.1 PFAM: protein of unknown function DUF162; KEGG: gtn:GTNG_0366 hypothetical protein YP_002948578.1 TIGRFAM: iron-sulfur cluster binding protein; PFAM: protein of unknown function DUF162; KEGG: afl:Aflv_2008 uncharacterized conserved protein containing a ferredoxin-like domain YP_002948579.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: gtn:GTNG_0368 (S)-2-hydroxy-acid oxidase iron-sulfur chain YP_002948580.1 PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: gka:GK0396 GntR family transcriptional regulator YP_002948581.1 TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: gka:GK0398 L-lactate permease YP_002948582.1 TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; cell division protein FtsA; KEGG: gtn:GTNG_0373 cell-shape determining protein YP_002948583.1 PFAM: NLP/P60 protein; KEGG: gtn:GTNG_0375 cell wall lytic activity YP_002948584.1 KEGG: gka:GK0401 hypothetical protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein YP_002948585.1 KEGG: gtn:GTNG_0377 hypothetical protein YP_002948586.1 KEGG: gka:GK0403 hypothetical protein YP_002948587.1 TIGRFAM: siroheme synthase; KEGG: gka:GK0404 siroheme synthase YP_002948588.1 PFAM: LmbE family protein; KEGG: gka:GK0407 hypothetical protein YP_002948589.1 PFAM: protein of unknown function DUF1806; KEGG: gtn:GTNG_0381 hypothetical protein YP_002948590.1 KEGG: gka:GK0409 hypothetical protein YP_002948591.1 catalyzes the hydrolysis of acylphosphate YP_002948592.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: gtn:GTNG_0384 ferrochelatase YP_002948593.1 catalyzes 2 sequential methylations, the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III, and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1 YP_002948594.1 PFAM: transposase IS4 family protein; KEGG: gka:GK2942 hypothetical protein YP_002948595.1 KEGG: bcy:Bcer98_1147 hypothetical protein YP_002948596.1 PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: bcy:Bcer98_1146 ferredoxin--nitrite reductase YP_002948597.1 KEGG: gtn:GTNG_0386 adenylylsulfate kinase; TIGRFAM: adenylylsulfate kinase; PFAM: adenylylsulfate kinase YP_002948598.1 ATP sulfurylase; ATPS; converts ATP and sulfate to 5'phosphosulfate and pyrophosphate; in some organisms this enzyme is involved in the incorporation of inorganic sulfate while in others it is involved in the production of ATP in the reverse direction; the enzyme from Thermus thermophilus is dimeric and binds a zinc ion that is coordinated by cysteine and histidine residues that are not found in all related proteins but is found in some thermophilic organisms YP_002948599.1 TIGRFAM: phosphoadenosine phosphosulfate reductase; adenylylsulfate reductase, thioredoxin dependent; PFAM: phosphoadenosine phosphosulfate reductase; KEGG: gka:GK0416 phosphoadenylyl-sulfate reductase (thioredoxin-dependent) YP_002948600.1 KEGG: bat:BAS3432 sporulation kinase A; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein YP_002948601.1 PFAM: protein of unknown function DUF1128; KEGG: gtn:GTNG_0390 hypothetical protein YP_002948602.1 KEGG: gtn:GTNG_0391 low molecular weight phosphotyrosine protein, phosphatase family protein; PFAM: protein-tyrosine phosphatase, low molecular weight; SMART: protein-tyrosine phosphatase, low molecular weight YP_002948604.1 TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN; KEGG: gtn:GTNG_0392 ribonuclease BN YP_002948605.1 KEGG: bcy:Bcer98_0396 hypothetical protein YP_002948606.1 KEGG: gka:GK0421 hypothetical protein YP_002948607.1 PFAM: major facilitator superfamily MFS_1; KEGG: gka:GK0422 multidrug-efflux transporter YP_002948608.1 TIGRFAM: calcium/proton antiporter, CaCA family; calcium/proton exchanger; PFAM: sodium/calcium exchanger membrane region; KEGG: gtn:GTNG_0395 calcium/proton exchanger YP_002948609.1 KEGG: gka:GK0424 hypothetical protein YP_002948610.1 PFAM: YfkB-like domain protein; radical SAM domain protein; KEGG: afl:Aflv_0326 radical SAM superfamily enzyme YP_002948611.1 TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, subunit alpha; hydro-lyase, Fe-S type, tartrate/fumarate subfamily subunit beta; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: gka:GK0426 fumarate hydratase class I (fumarase) YP_002948612.1 TIGRFAM: delta-lactam-biosynthetic de-N-acetylase; PFAM: polysaccharide deacetylase; KEGG: gtn:GTNG_0399 spore coat N-acetylmuramic acid deacetylase YP_002948613.1 KEGG: afl:Aflv_0330 3-methyladenine DNA glycosylase; PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein YP_002948614.1 TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; (uracil-5)-methyltransferase; KEGG: gtn:GTNG_0401 RNA methyltransferase-like protein YP_002948615.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: lsp:Bsph_3725 hypothetical protein YP_002948616.1 KEGG: gka:GK0212 trk family K(+) transporter; TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter YP_002948617.1 PFAM: transposase IS4 family protein; KEGG: gka:GK2942 hypothetical protein YP_002948619.1 KEGG: gtn:GTNG_2784 succinyl-CoA, coenzyme A transferase; TIGRFAM: succinate CoA transferase; PFAM: acetyl-CoA hydrolase/transferase YP_002948620.1 PFAM: LytTr DNA-binding region; KEGG: gtn:GTNG_2785 transcriptional regulatory protein YP_002948621.1 KEGG: afl:Aflv_1239 hypothetical protein YP_002948622.1 PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: gka:GK0445 acyl-CoA dehydrogenase YP_002948623.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: gka:GK0446 hypothetical protein YP_002948624.1 PFAM: penicillin-binding protein transpeptidase; NTF2 domain protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: bld:BLi01505 PbpC YP_002948625.1 catalyzes the formation of 2-oxoglutarate from isocitrate YP_002948626.1 KEGG: oih:OB0796 hypothetical protein YP_002948627.1 KEGG: gka:GK2575 peroxiredoxin; TIGRFAM: peroxiredoxin; PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; redoxin YP_002948628.1 TIGRFAM: alkyl hydroperoxide reductase subunit F; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; KEGG: afl:Aflv_2772 alkyl hydroperoxide reductase large subunit YP_002948629.1 PFAM: glycosyl transferase family 8; KEGG: gka:GK0447 hypothetical protein YP_002948630.1 KEGG: afl:Aflv_0340 hypothetical protein YP_002948631.1 KEGG: gka:GK0449 hypothetical protein YP_002948632.1 KEGG: gka:GK0450 hypothetical protein YP_002948633.1 TIGRFAM: transposase, IS605 OrfB family; transposase; PFAM: transposase IS605 OrfB; KEGG: noc:Noc_2686 transposase YP_002948634.1 binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities YP_002948635.1 PFAM: protein of unknown function DUF1811; KEGG: gka:GK0453 hypothetical protein YP_002948636.1 KEGG: gka:GK0454 hypothetical protein YP_002948637.1 SASP K; found in the forespore compartment YP_002948638.1 KEGG: bat:BAS0489 hypothetical protein YP_002948639.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: gtn:GTNG_0462 hypothetical protein YP_002948640.1 PFAM: protein of unknown function DUF1641; KEGG: gka:GK0458 hypothetical protein YP_002948641.1 TIGRFAM: formate dehydrogenase, subunit alpha; PFAM: molybdopterin oxidoreductase; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: gka:GK0459 formate dehydrogenase chain A YP_002948642.1 KEGG: gka:GK0460 hypothetical protein YP_002948643.1 involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth YP_002948644.1 PFAM: major facilitator superfamily MFS_1; KEGG: gtn:GTNG_0467 oxalate:formate antiporter YP_002948645.1 KEGG: gtn:GTNG_0468 A/G-specific adenine DNA glycosylase; TIGRFAM: A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; helix-hairpin-helix motif; NUDIX hydrolase; SMART: HhH-GPD family protein; iron-sulfur cluster loop YP_002948646.1 KEGG: gka:GK0464 hypothetical protein YP_002948647.1 Catalyzes a key regulatory step in fatty acid biosynthesis YP_002948648.1 TIGRFAM: small, acid-soluble spore protein, gamma-type; PFAM: acid-soluble spore protein gamma-type; KEGG: gtn:GTNG_0471 small, acid-soluble spore protein B YP_002948649.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; transposase IS891/IS1136/IS1341 family; KEGG: gka:GK2338 transposase YP_002948650.1 KEGG: bay:RBAM_008760 YgaB YP_002948651.1 PFAM: protein of unknown function DUF402; KEGG: gtn:GTNG_0473 hypothetical protein YP_002948652.1 PFAM: ABC transporter; ABC transporter transmembrane region; SMART: ATPase AAA; KEGG: gtn:GTNG_0474 unidentified transporter-ATP binding protein YP_002948653.1 PFAM: transposase IS4 family protein; KEGG: drm:Dred_2628 transposase, IS4 family protein YP_002948654.1 KEGG: gtn:GTNG_0476 oligopeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_002948655.1 KEGG: gtn:GTNG_0477 oligopeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_002948656.1 PFAM: extracellular solute-binding protein family 5; KEGG: gtn:GTNG_0478 dipeptide transporter protein DppA YP_002948657.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gtn:GTNG_0479 dipeptide ABC transporter (permease) DppB YP_002948658.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gka:GK0469 dipeptide ABC transporter (permease) YP_002948659.1 PFAM: protein of unknown function DUF939; KEGG: gtn:GTNG_0481 integral membrane protein YP_002948660.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: gka:GK1355 recombinase of Bh.Int-like element YP_002948661.1 PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase subunit alpha domain protein; glutamine amidotransferase class-II; glutamate synthase; KEGG: afl:Aflv_0362 glutamate synthase large subunit YP_002948662.1 converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate YP_002948663.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: afl:Aflv_0364 ABC-type uncharacterized transporter, ATPase component YP_002948664.1 PFAM: protein of unknown function DUF990; KEGG: gtn:GTNG_0485 daunorubicin resistance transmembrane protein YP_002948665.1 PFAM: protein of unknown function DUF990; KEGG: gka:GK0474 hypothetical protein YP_002948666.1 Converts (S)-lactate and NAD(+) to pyruvate and NADH YP_002948667.1 TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: bld:BLi00367 LctP YP_002948668.1 PFAM: transposase IS4 family protein; KEGG: npu:Npun_BR216 hypothetical protein YP_002948669.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bld:BLi04269 hypothetical protein YP_002948670.1 PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: bwe:BcerKBAB4_2539 histidine kinase YP_002948671.1 PFAM: transcriptional regulator; response regulator receiver; SMART: response regulator receiver; KEGG: bca:BCE_4531 DNA-binding response regulator YP_002948672.1 PFAM: ion transporter; KEGG: gka:GK0476 K+ channel subunit YP_002948673.1 PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; redoxin; KEGG: gtn:GTNG_0489 bacterioferritin comigratory protein YP_002948674.1 PFAM: ferric-uptake regulator; KEGG: gtn:GTNG_0490 transcriptional regulator Fur family YP_002948675.1 KEGG: gtn:GTNG_0491 hypothetical protein YP_002948676.1 PFAM: protein of unknown function UPF0236; KEGG: gka:GK1720 hypothetical protein YP_002948677.1 KEGG: gtn:GTNG_0492 hypothetical protein YP_002948678.1 PFAM: B3/4 domain protein; KEGG: gtn:GTNG_0493 hypothetical protein YP_002948679.1 KEGG: gka:GK0482 hypothetical protein; TIGRFAM: iron-sulfur cluster binding protein; PFAM: hypothetical protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; PBS lyase HEAT domain protein repeat-containing protein; SMART: PBS lyase HEAT domain protein repeat-containing protein YP_002948680.1 KEGG: gka:GK0483 hypothetical protein YP_002948681.1 TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: gtn:GTNG_0496 rRNA methylase YP_002948682.1 KEGG: gka:GK0485 hypothetical protein YP_002948683.1 PFAM: PrkA AAA domain protein; PrkA serine kinase; SMART: PrkA AAA domain protein; KEGG: gtn:GTNG_0497 serine protein kinase YP_002948684.1 PFAM: transposase IS4 family protein; KEGG: drm:Dred_2628 transposase, IS4 family protein YP_002948685.1 TIGRFAM: sporulation protein YhbH; PFAM: protein of unknown function DUF444; KEGG: gtn:GTNG_0498 hypothetical protein YP_002948686.1 KEGG: gtn:GTNG_0499 hypothetical protein YP_002948688.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: gtn:GTNG_0500 sugar-binding transcriptional regulator LacI family YP_002948689.1 PFAM: response regulator receiver; Helix-turn-helix type 11 domain protein; regulatory protein DeoR; SMART: response regulator receiver; KEGG: gtn:GTNG_0501 two-component response regulator YP_002948690.1 KEGG: gka:GK0559 two-component sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein YP_002948691.1 TIGRFAM: TRAP dicarboxylate transporter DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: gtn:GTNG_0503 C4-dicarboxylate binding protein YP_002948692.1 involved in the transport of C4-dicarboxylates across the membrane YP_002948693.1 TIGRFAM: flavoprotein WrbA; PFAM: flavodoxin/nitric oxide synthase; NADPH-dependent FMN reductase; NAD(P)H dehydrogenase (quinone); KEGG: bpu:BPUM_3713 trp repressor binding protein YP_002948694.1 PFAM: aldo/keto reductase; KEGG: gtn:GTNG_0505 oxidoreductase, AldO/KetO reductase family YP_002948695.1 PFAM: peptidase membrane zinc metallopeptidase KEGG: gtn:GTNG_0506 hypothetical protein YP_002948696.1 PFAM: protein of unknown function DUF21; hypothetical protein; transporter-associated region; KEGG: gka:GK0564 hemolysin YP_002948697.1 KEGG: gtn:GTNG_0508 ribosomal large subunit pseudouridine synthase D; TIGRFAM: pseudouridine synthase; PFAM: pseudouridine synthase YP_002948698.1 KEGG: gtn:GTNG_0509 hypothetical protein YP_002948699.1 PFAM: thioredoxin domain; KEGG: gka:GK0567 hypothetical protein YP_002948700.1 PFAM: disulfide bond formation protein DsbB; KEGG: gtn:GTNG_0511 disulfide oxidoreductase YP_002948701.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: afl:Aflv_2271 oligo-1,4-1,6-alpha-glucosidase (sucrase-maltase-isomaltase) YP_002948702.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: gka:GK0569 inosine-5-monophosphate dehydrogenase YP_002948703.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: gtn:GTNG_0513 phosphoglucomutase YP_002948704.1 TIGRFAM: transposase, IS605 OrfB family; transposase; PFAM: transposase IS605 OrfB; KEGG: noc:Noc_2686 transposase YP_002948705.1 PFAM: NADPH-dependent FMN reductase; NAD(P)H dehydrogenase (quinone); KEGG: bwe:BcerKBAB4_2096 azobenzene reductase YP_002948706.1 KEGG: gtn:GTNG_0514 hypothetical protein YP_002948707.1 KEGG: gka:GK0573 alkaline phosphatase YP_002948708.1 PFAM: ATPase AAA; KEGG: gka:GK0575 hypothetical protein YP_002948709.1 KEGG: gka:GK1708 transposase YP_002948711.1 KEGG: gka:GK0576 transposase of IS654-like element YP_002948712.1 KEGG: gka:GK0577 hypothetical protein YP_002948713.1 PFAM: zinc/iron permease; KEGG: gka:GK0578 hypothetical protein YP_002948714.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: gka:GK0580 ArsR family transcriptional regulator YP_002948715.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: gka:GK0581 cation efflux transporter YP_002948716.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gka:GK0582 trk family potassium transporter YP_002948717.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: gka:GK0584 cadmium efflux system accessory protein (cadmium-binding protein) YP_002948718.1 TIGRFAM: ATPase P; ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: gka:GK0585 cadmium-transporting ATPase YP_002948719.1 PFAM: SpoVR family protein; KEGG: gtn:GTNG_0517 stage V sporulation protein R YP_002948720.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: gtn:GTNG_0518 Bd-type quinol oxidase subunit I YP_002948721.1 KEGG: gka:GK2083 cytochrome bd-type ubiquinol oxidase subunit II YP_002948722.1 KEGG: gka:GK0606 hypothetical protein YP_002948723.1 PFAM: DsrE family protein; KEGG: gka:GK2076 hypothetical protein YP_002948724.1 PFAM: glutaredoxin; KEGG: gka:GK2075 glutaredoxin YP_002948725.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: afl:Aflv_2039 SAM-dependent methyltransferase YP_002948726.1 KEGG: gka:GK2072 hypothetical protein YP_002948727.1 PFAM: protein of unknown function DUF156; KEGG: gtn:GTNG_1984 hypothetical protein YP_002948728.1 PFAM: SirA family protein; KEGG: gtn:GTNG_1983 molybdopterin biosynthesis MoeB-like protein YP_002948729.1 KEGG: gtn:GTNG_1982 NADH dehydrogenase YP_002948730.1 PFAM: rhodanese; SMART: Rhodanese domain protein; KEGG: gka:GK2068 hypothetical protein YP_002948731.1 PFAM: rhodanese; SMART: Rhodanese domain protein; KEGG: gka:GK2067 hypothetical protein YP_002948732.1 PFAM: SirA family protein; Rhodanese domain protein; SMART: rhodanese; KEGG: gka:GK2066 hypothetical protein YP_002948733.1 PFAM: beta-lactamase; SMART: Rhodanese domain protein; KEGG: gka:GK2065 hypothetical protein YP_002948734.1 PFAM: SirA family protein; KEGG: gtn:GTNG_1983 molybdopterin biosynthesis MoeB-like protein YP_002948735.1 PFAM: protein of unknown function DUF81; KEGG: gka:GK2064 hypothetical protein YP_002948736.1 KEGG: gka:GK0607 hypothetical protein YP_002948737.1 PFAM: alcohol dehydrogenase GroES; alcohol dehydrogenase zinc-binding domain protein; KEGG: afw:Anae109_0322 alcohol dehydrogenase YP_002948738.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: pmy:Pmen_1500 ArsR family transcriptional regulator YP_002948739.1 PFAM: Luciferase-like monooxygenase; KEGG: bmj:BMULJ_05868 favin-dependent monooxygenase YP_002948740.1 TIGRFAM: acetaldehyde dehydrogenase (acetylating); PFAM: aldehyde dehydrogenase; KEGG: ssa:SSA_0523 aldehyde dehydrogenase YP_002948741.1 KEGG: gka:GK3302 transposase YP_002948742.1 PFAM: NUDIX hydrolase; KEGG: gtn:GTNG_1562 NTP pyrophosphohydrolase YP_002948743.1 PFAM: transposase IS4 family protein; KEGG: gka:GK1900 transposase YP_002948744.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK0291 ABC transporter ATP-binding protein YP_002948745.1 KEGG: gka:GK0290 hypothetical protein YP_002948746.1 KEGG: gka:GK0289 hypothetical protein YP_002948747.1 KEGG: gka:GK0288 NADH dehydrogenase (ubiquinone) chain 4 YP_002948748.1 KEGG: gka:GK0287 hypothetical protein YP_002948749.1 TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: drm:Dred_3222 YbaK/EbsC protein YP_002948750.1 TIGRFAM: transposase, IS605 OrfB family; transposase; PFAM: transposase IS605 OrfB; KEGG: noc:Noc_2686 transposase YP_002948751.1 KEGG: mma:MM_3154 hypothetical protein YP_002948752.1 TIGRFAM: transposase ; transposase, IS605 OrfB family; KEGG: btl:BALH_1567 IS605 family transposase YP_002948753.1 PFAM: small multidrug resistance protein; KEGG: gtn:GTNG_0521 molecular chaperone YP_002948754.1 KEGG: cbf:CLI_0076 hypothetical protein YP_002948755.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: esi:Exig_0136 ECF subfamily RNA polymerase sigma-24 factor YP_002948756.1 PFAM: antibiotic biosynthesis monooxygenase; KEGG: bcl:ABC0214 hypothetical protein YP_002948757.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: rxy:Rxyl_0902 protein of unknown function DUF6, transmembrane YP_002948758.1 PFAM: protein of unknown function DUF1232; KEGG: gka:GK0609 hypothetical protein YP_002948759.1 PFAM: ribonucleotide reductase; KEGG: gka:GK0912 ribonucleoside-diphosphate reductase subunit beta YP_002948760.1 Catalyzes the rate-limiting step in dNTP synthesis YP_002948761.1 PFAM: carbon starvation protein CstA; KEGG: gtn:GTNG_0525 carbon starvation protein A YP_002948762.1 PFAM: protein of unknown function DUF466; KEGG: gtn:GTNG_0526 hypothetical protein YP_002948763.1 KEGG: gtn:GTNG_0527 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein YP_002948764.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: afl:Aflv_2324 glycosidase YP_002948765.1 KEGG: gtn:GTNG_0529 metal-dependent hydrolase YP_002948766.1 PFAM: major facilitator superfamily MFS_1; KEGG: gka:GK0617 antibiotic resistance protein (antibiotic efflux protein) YP_002948767.1 PFAM: protein of unknown function Met10; SMART: PUA domain containing protein; KEGG: afl:Aflv_2321 SAM-dependent methyltransferase YP_002948768.1 PFAM: TENA/THI-4 domain protein; KEGG: gka:GK0618 transcriptional regulator YP_002948769.1 KEGG: gka:GK0619 hypothetical protein YP_002948770.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK0620 hypothetical protein YP_002948771.1 PFAM: cobalt transporter; KEGG: gtn:GTNG_0534 ABC-type cobalt transporter, permease CbiQ-like protein YP_002948772.1 regulates the production of extracellular enzymes YP_002948773.1 with ThiF, ThiG, and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate YP_002948774.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate YP_002948775.1 catalyzes the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD or ThiS in the molybdopterin or thiamin pyrophosphate biosynthesis pathways YP_002948776.1 TIGRFAM: transposase, IS605 OrfB family; transposase; PFAM: transposase IS605 OrfB; KEGG: noc:Noc_2686 transposase YP_002948777.1 PFAM: protein of unknown function DUF21; hypothetical protein; transporter-associated region; SMART: hypothetical protein; KEGG: gka:GK0628 hypothetical protein YP_002948778.1 PFAM: small acid-soluble spore protein alpha/beta type; KEGG: gka:GK0629 small acid-soluble spore protein YP_002948779.1 KEGG: gtn:GTNG_0542 hypothetical protein YP_002948780.1 PFAM: ABC transporter; TOBE domain protein; transport-associated OB domain protein; SMART: ATPase AAA; KEGG: gtn:GTNG_0543 sugar ABC transporter ATP-binding protein YP_002948781.1 PFAM: helix-turn-helix Fis-type; KEGG: gka:GK0632 hypothetical protein YP_002948782.1 KEGG: gka:GK0633 hypothetical protein YP_002948783.1 KEGG: gka:GK0634 hypothetical protein YP_002948784.1 KEGG: gtn:GTNG_0546 hypothetical protein YP_002948785.1 KEGG: gtn:GTNG_0547 hypothetical protein YP_002948786.1 KEGG: gtn:GTNG_0548 hypothetical protein YP_002948787.1 PFAM: RimK domain protein ATP-grasp; KEGG: gtn:GTNG_0549 hypothetical protein YP_002948788.1 PFAM: protein of unknown function DUF964; KEGG: gka:GK0640 hypothetical protein YP_002948789.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase type 3; Haloacid dehalogenase domain protein hydrolase; KEGG: gtn:GTNG_0552 hydrolase, haloacid dehalogenase-like family YP_002948790.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III YP_002948791.1 TIGRFAM: transposase, IS605 OrfB family; transposase; PFAM: transposase IS605 OrfB; KEGG: noc:Noc_2686 transposase YP_002948792.1 KEGG: gtn:GTNG_0554 hypothetical protein YP_002948793.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: afl:Aflv_1274 ABC-type Na+ efflux pump, ATPase component YP_002948794.1 KEGG: gka:GK0645 sodium ABC transporter permease YP_002948795.1 catalyzes the exonucleic cleavage of mRNA yielding nucleioside 5'-phosphates YP_002948796.1 KEGG: gka:GK0648 hypothetical protein YP_002948797.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine YP_002948798.1 KEGG: gka:GK0650 hypothetical protein YP_002948799.1 hpr; ScoC; MarR family; protease production regulatory protein YP_002948800.1 PFAM: protein of unknown function DUF1878; KEGG: gka:GK0653 hypothetical protein YP_002948801.1 KEGG: afl:Aflv_2288 hypothetical protein YP_002948802.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: gka:GK0656 post-translocation molecular chaperone YP_002948803.1 PFAM: histidine triad (HIT) protein; KEGG: gtn:GTNG_0565 bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) YP_002948804.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bld:BLi01085 EcsA YP_002948805.1 PFAM: ABC transporter; KEGG: gka:GK0659 ABC transporter (permease) YP_002948806.1 PFAM: antibiotic biosynthesis monooxygenase; KEGG: afl:Aflv_2281 uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides YP_002948807.1 KEGG: gka:GK0660 hypothetical protein YP_002948808.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III YP_002948809.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic YP_002948810.1 catalyzes the formation of protoporphyrin IX from protoporphyrinogen IX YP_002948811.1 PFAM: regulatory protein TetR; KEGG: gka:GK0664 TetR/AcrR family transcriptional regulator YP_002948812.1 TIGRFAM: YhgE/Pip N-terminal domain protein; YhgE/Pip C-terminal domain protein; KEGG: gka:GK0328 hypothetical protein YP_002948813.1 KEGG: gka:GK0666 hypothetical protein YP_002948814.1 PFAM: beta-lactamase; KEGG: gtn:GTNG_0574 metal-dependent hydrolase YP_002948815.1 activates fatty acids by binding to coenzyme A YP_002948816.1 PFAM: protein of unknown function DUF534; KEGG: gka:GK0669 ABC transporter (substrate-binding protein) YP_002948817.1 PFAM: inner-membrane translocator; KEGG: gka:GK0670 ABC transporter (permease) YP_002948818.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK0671 ABC transporter ATP-binding protein YP_002948819.1 TIGRFAM: D-amino acid aminotransferase; PFAM: aminotransferase class IV; KEGG: gtn:GTNG_0579 D-alanine aminotransferase YP_002948820.1 PFAM: AzlC family protein; KEGG: gtn:GTNG_0580 branched-chain amino acid transporter YP_002948821.1 PFAM: branched-chain amino acid transport; KEGG: gtn:GTNG_0581 hypothetical protein YP_002948822.1 PFAM: electron transporter SCO1/SenC; KEGG: gtn:GTNG_0582 SCO1/SenC family lipoprotein YP_002948823.1 KEGG: afl:Aflv_2242 Zn-dependent protease with chaperone function YP_002948824.1 TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: gka:GK0676 isocitrate lyase YP_002948825.1 KEGG: gtn:GTNG_0584 hypothetical protein YP_002948826.1 PFAM: ComK family protein; KEGG: gka:GK0678 competence transcription factor YP_002948827.1 PFAM: hypothetical protein; KEGG: gtn:GTNG_0586 hypothetical protein YP_002948828.1 KEGG: gtn:GTNG_0587 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein YP_002948829.1 TIGRFAM: ATP-dependent nuclease subunit B; KEGG: gka:GK0681 ATP-dependent deoxyribonuclease subunit B YP_002948830.1 TIGRFAM: recombination helicase AddA; PFAM: UvrD/REP helicase; KEGG: gtn:GTNG_0589 ATP-dependent nuclease, subunit A YP_002948831.1 TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; KEGG: gtn:GTNG_0590 exonuclease SbcD-like protein YP_002948832.1 PFAM: SMC domain protein; KEGG: gtn:GTNG_0591 YirY YP_002948833.1 KEGG: gka:GK0685 spore germination protein YP_002948834.1 KEGG: gka:GK0686 spore germination protein YP_002948835.1 KEGG: gtn:GTNG_0594 spore germination protein GerPD YP_002948836.1 KEGG: gtn:GTNG_0595 spore germination protein GerPC YP_002948837.1 KEGG: gtn:GTNG_0596 spore germination protein GerPB YP_002948838.1 KEGG: gka:GK0690 spore germination protein YP_002948839.1 KEGG: gtn:GTNG_0598 spore germination protein YP_002948840.1 KEGG: gka:GK0692 spore germination protein YP_002948841.1 PFAM: AMP-dependent synthetase and ligase; KEGG: afl:Aflv_2219 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II YP_002948842.1 PFAM: protein of unknown function DUF405; protein of unknown function DUF418; KEGG: gka:GK0694 hypothetical protein YP_002948844.1 PFAM: fumarylacetoacetate hydrolase; KEGG: gtn:GTNG_0603 fumarylacetoacetate hydrolase family protein YP_002948845.1 TIGRFAM: ornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: afl:Aflv_2206 ornithine aminotransferase YP_002948846.1 PFAM: protein of unknown function DUF1516; KEGG: gka:GK0697 hypothetical protein YP_002948847.1 KEGG: gka:GK0698 hypothetical protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; hypothetical protein; GGDEF domain containing protein; hypothetical protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein YP_002948848.1 KEGG: gtn:GTNG_0606 hypothetical protein YP_002948849.1 KEGG: gtn:GTNG_0607 asparagine synthetase, glutamine-hydrolyzing; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferase class-II YP_002948850.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: gtn:GTNG_0608 MATE efflux family protein YP_002948851.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: gka:GK0702 AraC/XylS family transcriptional regulator YP_002948852.1 PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein Ig domain protein region domain protein; SMART: alpha amylase catalytic sub domain; KEGG: gtn:GTNG_0610 neopullulanase YP_002948853.1 KEGG: gka:GK1708 transposase YP_002948854.1 PFAM: binding-protein-dependent transporters inner membrane component; hypotheticalprotein?; KEGG: gtn:GTNG_0612 maltose/maltodextrin transporter permease YP_002948855.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gka:GK0706 maltose/maltodextrin transporter (permease) YP_002948856.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: gka:GK0707 alpha-amylase YP_002948857.1 KEGG: gka:GK0708 transcriptional regulator involved in carbon catabolite control; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_002948858.1 PFAM: alpha amylase catalytic region; glycoside hydrolase starch-binding; cell surface receptor IPT/TIG domain protein; SMART: alpha amylase catalytic sub domain; alpha amylase all-beta; KEGG: tpd:Teth39_0672 alpha amylase, catalytic region YP_002948859.1 PFAM: extracellular solute-binding protein family 1; KEGG: tpd:Teth39_0669 extracellular solute-binding protein YP_002948860.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: tpd:Teth39_0670 binding-protein-dependent transport systems inner membrane component YP_002948861.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: tpd:Teth39_0671 binding-protein-dependent transport systems inner membrane component YP_002948862.1 PFAM: glycoside hydrolase family 31; KEGG: aba:acid345_0650 alpha-glucosidase YP_002948863.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gtn:GTNG_0620 oxidoreductase (short-chain hydrogenase:reductase family) YP_002948864.1 TIGRFAM: methionine synthase; PFAM: homocysteine S-methyltransferase; methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; dihydropteroate synthase DHPS; Vitamin B12 dependent methionine synthase activation region; KEGG: gka:GK0716 5-methyltetrahydrofolate--homocysteine S-methyltransferase YP_002948865.1 catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine; expressed in B. subtilis under methionine starvation conditions YP_002948866.1 nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription YP_002948867.1 SMART: RNA binding S1 domain protein; KEGG: afl:Aflv_2658 uncharacterized protein conserved in bacteria containing two ribosomal protein S1-like RNA-binding domains YP_002948868.1 PFAM: basic membrane lipoprotein; KEGG: afl:Aflv_2163 uncharacterized ABC-type transporter, periplasmic component/surface lipoprotein YP_002948869.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: afl:Aflv_2162 methyl-accepting chemotaxis protein YP_002948870.1 KEGG: gka:GK0743 hypothetical protein YP_002948871.1 TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: gtn:GTNG_0632 hypothetical protein YP_002948872.1 KEGG: gtn:GTNG_0633 hypothetical protein YP_002948873.1 KEGG: gka:GK0746 hypothetical protein YP_002948874.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase type 3; haloacid dehalogenase; sucrose-6F-phosphate phosphohydrolase; KEGG: gtn:GTNG_0634 hydrolase HAD superfamily YP_002948875.1 KEGG: gtn:GTNG_0635 hypothetical protein YP_002948876.1 PFAM: protein of unknown function DUF59; KEGG: gka:GK0753 hypothetical protein YP_002948877.1 KEGG: gtn:GTNG_0644 hypothetical protein YP_002948878.1 KEGG: gtn:GTNG_0645 molybdopterin-guanine dinucleotide biosynthesis protein A YP_002948879.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; transposase IS891/IS1136/IS1341 family; KEGG: gka:GK2338 transposase YP_002948880.1 PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: gka:GK3439 transposase YP_002948881.1 KEGG: gtn:GTNG_0659 molybdenum cofactor biosynthesis protein A; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: radical SAM domain protein; molybdenum cofactor synthesis protein; SMART: Elongator protein 3/MiaB/NifB YP_002948882.1 PFAM: protein of unknown function DUF542 ScdA domain protein; hemerythrin HHE cation binding domain protein; KEGG: gtn:GTNG_0660 nitric oxide-dependent regulator YP_002948883.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; MoeA domain protein domain IV; molybdopterin binding domain; KEGG: gka:GK0772 molybdopterin cofactor biosynthesis protein YP_002948884.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: gka:GK0773 molybdopterin-guanine dinucleotide biosynthesis protein YP_002948885.1 PFAM: molybdopterin biosynthesis MoaE protein; KEGG: gka:GK0774 molybdopterin converting factor (subunit 2) YP_002948886.1 TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; KEGG: gtn:GTNG_0665 molybdopterin (MPT) converting factor, subunit 1 YP_002948887.1 KEGG: gka:GK0776 hypothetical protein YP_002948888.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate YP_002948889.1 bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate YP_002948890.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate YP_002948891.1 TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: gka:GK0793 acetylornithine aminotransferase YP_002948892.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers YP_002948893.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity YP_002948894.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation YP_002948895.1 KEGG: gtn:GTNG_0677 hypothetical protein YP_002948897.1 KEGG: gtn:GTNG_0678 ATP-dependent Clp protease ATP-binding subunit ClpB; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; ATPase AAA; Torsin; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: ATPase AAA YP_002948898.1 KEGG: gka:GK0801 hypothetical protein YP_002948899.1 KEGG: gka:GK0802 hypothetical protein YP_002948900.1 KEGG: gka:GK0803 hypothetical protein YP_002948901.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs YP_002948902.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP YP_002948903.1 KEGG: gka:GK0806 hypothetical protein YP_002948904.1 KEGG: gka:GK0807 hypothetical protein YP_002948905.1 KEGG: gtn:GTNG_0688 hypothetical protein YP_002948906.1 KEGG: afl:Aflv_2135 tryptophanyl-tRNA synthetase; TIGRFAM: tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib YP_002948907.1 KEGG: gka:GK0810 hypothetical protein YP_002948908.1 PFAM: extracellular solute-binding protein family 5; KEGG: gtn:GTNG_0691 oligopeptide-binding protein OppA YP_002948909.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gtn:GTNG_0692 oligopeptide transporter permease protein OppB YP_002948910.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gka:GK0813 oligopeptide ABC transporter (permease) YP_002948911.1 KEGG: gka:GK0814 oligopeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_002948912.1 PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; KEGG: gka:GK0815 oligopeptide ABC transporter ATP-binding protein YP_002948913.1 KEGG: afl:Aflv_2128 hypothetical protein YP_002948914.1 PFAM: transposase mutator type; KEGG: gtn:GTNG_0322 transposase (04) YP_002948915.1 the anti-alpha factor Spx interacts with RNA polymerase subunit alpha C-terminal domain in a region that interacts with the sigma 70 subunit and may interfere with activation of promoters; in Bacillus subtilis this protein is a substrate for ClpXP protease; blocks transcription of the competence regulatory gene encoded by the srf operon; regulates a number of genes involved in thiol homeostasis including trxA and trxB; monomeric member of ArsC family of proteins; does not bind DNA; contains a disulfide bond between C10 and C13 which may sense disulfide stress YP_002948916.1 PFAM: integral membrane protein TerC; KEGG: gtn:GTNG_0698 integral membrane protein YP_002948917.1 enables recognition and targeting of proteins for proteolysis, involved in negative regulation of competence YP_002948918.1 catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol) YP_002948919.1 PFAM: Competence CoiA family protein; KEGG: gtn:GTNG_0701 hypothetical protein YP_002948920.1 TIGRFAM: oligoendopeptidase F; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; oligopeptidase F; KEGG: gtn:GTNG_0702 oligopeptidase F YP_002948921.1 KEGG: gtn:GTNG_0703 hypothetical protein YP_002948922.1 KEGG: gka:GK0824 hypothetical protein YP_002948923.1 PFAM: globin; KEGG: gka:GK0825 hypothetical protein YP_002948924.1 PFAM: lytic transglycosylase catalytic; KEGG: gtn:GTNG_0706 lytic transglycosylase YP_002948925.1 PFAM: adenylate cyclase; KEGG: gtn:GTNG_0707 hypothetical protein YP_002948926.1 KEGG: gtn:GTNG_0708 hypothetical protein YP_002948927.1 PFAM: RelA/SpoT domain protein; KEGG: gka:GK0829 hypothetical protein YP_002948928.1 catalyzes the phosphorylation of NAD to NADP YP_002948929.1 KEGG: gtn:GTNG_0711 ribosomal large subunit pseudouridine synthase D-like protein; TIGRFAM: pseudouridine synthase; PFAM: pseudouridine synthase YP_002948930.1 asymmetrical; catalyzes the formation of NTP and NMP from P(1),P(4)-bis(5'-nucleosyl) tetraphosphate; acts on bis(5'-guanosyl) tetraphosphate, bis(5'-xanthosyl)-tetraphosphate, on bis(5'-adenosyl)-tetraphosphate, and bis(5'-uridyl)-tetraphosphate YP_002948931.1 PFAM: cell cycle protein; KEGG: gka:GK0833 stage V sporulation protein E YP_002948932.1 Catalyzes a key regulatory step in fatty acid biosynthesis YP_002948933.1 KEGG: gka:GK0835 hypothetical protein YP_002948934.1 PFAM: protein of unknown function DUF1360; KEGG: gka:GK0844 hypothetical protein YP_002948936.1 KEGG: gtn:GTNG_0729 hypothetical protein YP_002948937.1 KEGG: gka:GK0850 hypothetical protein YP_002948938.1 PFAM: protein of unknown function DUF1657; KEGG: gka:GK0851 hypothetical protein YP_002948939.1 KEGG: gka:GK0852 hypothetical protein YP_002948940.1 TIGRFAM: stage V sporulation protein AC; PFAM: SpoVA protein; KEGG: gka:GK0853 stage V sporulation protein AC YP_002948941.1 TIGRFAM: stage V sporulation protein AD; PFAM: stage V sporulation AD family protein; KEGG: gka:GK0854 stage V sporulation protein AD YP_002948942.1 TIGRFAM: stage V sporulation protein AE; PFAM: SpoVA protein; KEGG: gka:GK0855 stage V sporulation protein AE YP_002948943.1 PFAM: protein of unknown function DUF1657; KEGG: gka:GK0856 hypothetical protein YP_002948944.1 PFAM: protein of unknown function DUF421; protein of unknown function DUF1657; KEGG: gka:GK0857 hypothetical protein YP_002948945.1 KEGG: gka:GK0858 hypothetical protein YP_002948946.1 PFAM: thioredoxin domain; KEGG: gka:GK0859 thioredoxin YP_002948947.1 KEGG: gtn:GTNG_0740 hypothetical protein YP_002948948.1 KEGG: bcl:ABC0238 hypothetical protein YP_002948949.1 KEGG: gka:GK0862 hypothetical protein YP_002948950.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gtn:GTNG_0742 hypothetical protein YP_002948951.1 similar to 2'-5' RNA ligase YP_002948952.1 PFAM: esterase; KEGG: gka:GK0865 hypothetical protein YP_002948953.1 catalyzes the formation of cysteine from cystathionine; in B. subtilis also has O-acetylhomoserine thiolyase activity YP_002948954.1 catalyzes the formation of L-homocysteine from cystathionine YP_002948955.1 PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: gtn:GTNG_2048 transposase YP_002948956.1 PFAM: membrane-flanked domain; KEGG: gtn:GTNG_0774 hypothetical protein YP_002948957.1 PFAM: membrane-flanked domain; KEGG: gtn:GTNG_0775 hypothetical protein YP_002948959.1 PFAM: aldehyde dehydrogenase; KEGG: bsu:BSU38830 aldehyde dehydrogenase YP_002948960.1 PFAM: OsmC family protein; KEGG: oih:OB3035 hypothetical protein YP_002948961.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis YP_002948962.1 PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; malic protein NAD-binding; KEGG: tte:TTE1344 glutamate dehydrogenase/leucine dehydrogenase YP_002948963.1 PFAM: transposase mutator type; KEGG: gtn:GTNG_0322 transposase (04) YP_002948964.1 PFAM: diacylglycerol kinase; SMART: diacylglycerol kinase; KEGG: gtn:GTNG_0809 hypothetical protein YP_002948965.1 KEGG: bwe:BcerKBAB4_4447 hypothetical protein YP_002948966.1 PFAM: transposase IS4 family protein; KEGG: gka:GK2942 hypothetical protein YP_002948967.1 KEGG: cbl:CLK_A0269 IS transposase YP_002948968.1 TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein; KEGG: bce:BC5067 camphor resistance protein CrcB YP_002948969.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling YP_002948970.1 PFAM: protein of unknown function DUF1212; KEGG: gka:GK0922 hypothetical protein YP_002948971.1 KEGG: gka:GK0923 hypothetical protein YP_002948972.1 TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: gka:GK0924 amidohydrolase YP_002948973.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gka:GK0925 hypothetical protein YP_002948974.1 PFAM: mandelate racemase/muconate lactonizing protein; KEGG: gtn:GTNG_0815 N-acylamino acid racemase YP_002948975.1 TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: gka:GK0928 sodium:solute symporter YP_002948976.1 PFAM: protein of unknown function DUF485; KEGG: gtn:GTNG_0817 hypothetical protein YP_002948977.1 KEGG: cbl:CLK_A0269 IS transposase YP_002948978.1 PFAM: amino acid permease-associated region; Amino acid transporter transmembrane; KEGG: gka:GK0930 amino acid transporter YP_002948979.1 heat shock-induced YP_002948980.1 KEGG: gtn:GTNG_0820 hypothetical membrane associated protein YP_002948981.1 PFAM: small acid-soluble spore protein alpha/beta type; KEGG: gtn:GTNG_0821 small acid-soluble spore protein (major alpha-type SASP) YP_002948982.1 KEGG: afl:Aflv_2020 hypothetical protein YP_002948983.1 KEGG: gtn:GTNG_0828 hypothetical protein YP_002948984.1 KEGG: gka:GK0940 hypothetical protein YP_002948986.1 PFAM: cobalamin B12-binding domain protein; radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: gtn:GTNG_0831 Mg-protoporphyrin IX monomethyl ester oxidativecyclase YP_002948987.1 KEGG: gtn:GTNG_0832 two-component sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; hypothetical protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein YP_002948988.1 KEGG: gka:GK0945 methylated-DNA-protein-cysteine S-methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; methylguanine DNA methyltransferase ribonuclease domain protein YP_002948989.1 PFAM: inner-membrane translocator; KEGG: gtn:GTNG_0834 methylthioribose transporter permease YP_002948990.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gtn:GTNG_0835 ABC-type sugar (aldose) transporter, ATPase component YP_002948991.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: gka:GK0948 ribose ABC transporter (substrate-binding protein) YP_002948992.1 isomerizes methylthioribose-1-phosphate into methylthioribulose-1-phosphate; involved in methionine salvage pathway YP_002948993.1 phosphorylates methylthioribose to form methylthioribose-1-phosphate; involved in methionine salvage pathway YP_002948994.1 PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: gka:GK0951 hypothetical protein YP_002948995.1 produces methionine from 2-keto-4-methylthiobutyrate and glutamine in vitro; mutations do not affect methionine salvage in vivo however YP_002948996.1 converts 2,3-diketo-5-methylthiopentyl-1-phosphate into 2-hydroxy 3-keto-5-methylthiopentenyl-1-phosphate; involved in methionine salvage YP_002948997.1 converts 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate to 1,2-dihydroxy-3-keto-5-methylthiopentene; involved in methionine salvage YP_002948998.1 converts methylthioribulose-1-phosphate into 2,3-diketo-5-methylthiopentyl-1-phosphate; involved in methionine salvage YP_002948999.1 PFAM: acireductone dioxygenase; Cupin 2 conserved barrel domain protein; KEGG: gtn:GTNG_0844 5-methylthio-3-oxo-1-penten-1,2-diol dioxygenase YP_002949000.1 PFAM: zinc/iron permease; KEGG: gka:GK0957 divalent heavy-metal cation transporter YP_002949001.1 PFAM: regulatory protein MarR; transcriptional regulator PadR family protein; SMART: regulatory protein MarR; KEGG: gka:GK0958 MarR family transcriptional regulator YP_002949002.1 PFAM: propanediol utilization protein; KEGG: gka:GK0959 hypothetical protein YP_002949003.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; hypothetical protein; peptidase S9B dipeptidylpeptidase IV domain protein; KEGG: gka:GK0961 acylaminoacyl-peptidase YP_002949004.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; transposase IS891/IS1136/IS1341 family; KEGG: gka:GK2338 transposase YP_002949005.1 TIGRFAM: oligoendopeptidase, M3 family; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: gka:GK0963 oligoendopeptidase F YP_002949006.1 PFAM: DNA polymerase beta domain protein region; KEGG: mem:Memar_1162 DNA polymerase subunit beta YP_002949007.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gtn:GTNG_0852 acetyltransferase YP_002949008.1 PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: gka:GK3439 transposase YP_002949009.1 PFAM: regulatory protein TetR; KEGG: gtn:GTNG_0855 TetR family transcriptional regulator family YP_002949010.1 KEGG: hypothetical protein YP_002949014.1 PFAM: protein of unknown function UPF0236; KEGG: gka:GK3431 hypothetical protein YP_002949015.1 PFAM: transposase IS66; KEGG: gka:GK2663 transposase YP_002949017.1 PFAM: transposase IS4 family protein; KEGG: gka:GK1010 transposase YP_002949018.1 PFAM: transposase IS4 family protein; KEGG: gtn:GTNG_3446 IS982 family transposase YP_002949021.1 PFAM: alcohol dehydrogenase GroES; alcohol dehydrogenase zinc-binding domain protein; KEGG: hma:rrnAC1975 alcohol dehydrogenase YP_002949022.1 PFAM: aldehyde dehydrogenase; KEGG: bcl:ABC0047 aldehyde dehydrogenase YP_002949024.1 PFAM: ATPase AAA; ATPase AAA central domain protein; UvrB/UvrC protein; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: gtn:GTNG_0856 ATP-dependent Clp protease-like (class III stress gene) YP_002949025.1 KEGG: gtn:GTNG_0857 hypothetical protein YP_002949026.1 KEGG: gka:GK0970 hypothetical protein YP_002949027.1 PFAM: GerA spore germination protein; KEGG: gka:GK0972 spore germination protein YP_002949028.1 TIGRFAM: germination protein, Ger(x)C family; PFAM: Spore germination protein; KEGG: gka:GK0974 spore germination protein YP_002949029.1 TIGRFAM: exsB protein; PFAM: ExsB family protein; PP-loop domain protein; KEGG: afl:Aflv_1971 predicted PP-loop superfamily ATPase YP_002949030.1 PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: gka:GK0976 6-pyruvoyl tetrahydrobiopterin synthase YP_002949031.1 TIGRFAM: 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE; PFAM: radical SAM protein; KEGG: gka:GK0977 coenzyme PQQ synthesis YP_002949032.1 KEGG: gtn:GTNG_0868 hypothetical protein YP_002949033.1 PFAM: cell wall hydrolase SleB; peptidoglycan-binding LysM; SMART: peptidoglycan-binding LysM; KEGG: gtn:GTNG_0869 spore cortex-lytic enzyme-like protein YP_002949034.1 KEGG: gka:GK0982 hypothetical protein YP_002949035.1 KEGG: gtn:GTNG_0871 hypothetical protein YP_002949036.1 KEGG: gka:GK0985 hypothetical protein YP_002949037.1 PFAM: nitroreductase; KEGG: gtn:GTNG_0875 NAD(P)H nitroreductase YP_002949038.1 KEGG: gka:GK0988 hypothetical protein YP_002949039.1 PFAM: alpha/beta hydrolase fold; KEGG: gtn:GTNG_0876 hydrolase YP_002949040.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase type 3; sucrose-6F-phosphate phosphohydrolase; KEGG: afl:Aflv_1943 predicted hydrolase of the HAD superfamily YP_002949041.1 PFAM: CAT RNA-binding domain protein; PRD domain protein; KEGG: gtn:GTNG_0877 transcription antiterminator YP_002949042.1 PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: gka:GK3439 transposase YP_002949043.1 TIGRFAM: PTS system, glucose-specific IIBC subunit; PTS system, glucose subfamily, IIsubunit alpha; PTS system, glucose-like IIB subunint; PTS system, maltose and glucose-specific subfamily, IIC subunit; PFAM: phosphotransferase system EIIC; sugar-specific permease EIIA 1 domain; phosphotransferase system PTS EIIB protein; KEGG: gka:GK0991 PTS system, glucose-specific enzyme II, A component YP_002949044.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: gtn:GTNG_0879 phosphocarrier protein HPr YP_002949045.1 KEGG: gtn:GTNG_0880 phosphotransferase system enzyme I; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; PEP-utilising protein mobile region YP_002949046.1 TIGRFAM: sporulation protein YyaC; PFAM: protein of unknown function DUF1256; KEGG: gtn:GTNG_0881 hypothetical protein YP_002949047.1 KEGG: gtn:GTNG_0883 hypothetical protein YP_002949048.1 PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: gka:GK1020 methyl-accepting chemotaxis protein YP_002949049.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide YP_002949050.1 component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA YP_002949051.1 PFAM: cupin; KEGG: bwe:BcerKBAB4_5567 cupin 2 domain-containing protein YP_002949052.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gtn:GTNG_0888 3-oxoacyl-(acyl carrier protein) reductase-like protein YP_002949053.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; NADP oxidoreductase coenzyme F420-dependent; KEGG: gka:GK1027 3-hydroxyisobutyrate dehydrogenase YP_002949054.1 PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: gka:GK1028 acyl-CoA dehydrogenase YP_002949055.1 Involved in the nonphosphorylative, ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate YP_002949056.1 PFAM: aminoglycoside phosphotransferase; KEGG: gka:GK1032 hypothetical protein YP_002949057.1 PFAM: 2-phosphosulfolactate phosphatase; KEGG: gtn:GTNG_0895 hypothetical protein YP_002949059.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES; KEGG: gka:GK1034 NADPH:quinone oxidoreductase YP_002949060.1 PFAM: aminotransferase class I and II; KEGG: gka:GK1035 aminotransferase A YP_002949061.1 PFAM: conserved hypothetical protein; KEGG: gtn:GTNG_0898 hypothetical protein YP_002949062.1 TIGRFAM: magnesium and cobalt transporter CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: gka:GK1037 divalent cation transporter YP_002949063.1 KEGG: sth:STH2696 hypothetical protein YP_002949064.1 PFAM: Domain of unknown function DUF1906; KEGG: gka:GK1038 hypothetical protein YP_002949065.1 PFAM: CheW domain protein; response regulator receiver; SMART: CheW domain protein; response regulator receiver; KEGG: afl:Aflv_1927 chemotaxis protein CheV (CheW-REC domains) YP_002949066.1 KEGG: gtn:GTNG_0902 hypothetical protein YP_002949067.1 PFAM: metallophosphoesterase; KEGG: gtn:GTNG_0903 Ser/Thr protein phosphatase family protein YP_002949068.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gka:GK1044 short chain dehydrogenase YP_002949069.1 PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: gka:GK1045 hypothetical protein YP_002949070.1 KEGG: gka:GK1046 hypothetical protein YP_002949071.1 KEGG: gka:GK1047 hypothetical protein YP_002949072.1 PFAM: hypothetical protein; KEGG: gtn:GTNG_0908 hypothetical protein YP_002949073.1 PFAM: tetrahydrodipicolinate succinyltransferase domain protein; transferase; KEGG: gtn:GTNG_0911 tetrahydrodipicolinate succinylase YP_002949074.1 KEGG: gtn:GTNG_0912 N-acetyldiaminopimelate deacetylase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_002949075.1 PFAM: protein of unknown function UPF0180; KEGG: gka:GK1051 hypothetical protein YP_002949076.1 PFAM: beta-lactamase; RNA-metabolising metallo-beta-lactamase; KEGG: gka:GK1053 hypothetical protein YP_002949077.1 PFAM: protein of unknown function DUF1447; KEGG: gka:GK1054 hypothetical protein YP_002949078.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase type 3; haloacid dehalogenase; sucrose-6F-phosphate phosphohydrolase; KEGG: gka:GK1056 hypothetical protein YP_002949079.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+) YP_002949080.1 KEGG: oih:OB1411 hypothetical protein YP_002949081.1 KEGG: gka:GK1058 dehydrogenase E1 component, alpha subunit (lipoamide); TIGRFAM: pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha; PFAM: dehydrogenase E1 component YP_002949082.1 PFAM: transketolase; transketolase domain protein; KEGG: gka:GK1059 dehydrogenase E1 component subunit beta (lipoamide) YP_002949083.1 PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; KEGG: gtn:GTNG_0924 branched-chain alpha-keto acid dehydrogenase subunit E2 YP_002949084.1 E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide YP_002949085.1 KEGG: bpu:BPUM_3098 hypothetical protein YP_002949087.1 KEGG: gtn:GTNG_0926 hypothetical protein YP_002949088.1 PFAM: Domain of unknown function DUF1885; KEGG: bce:BC3968 hypothetical protein YP_002949089.1 KEGG: afl:Aflv_1888 hypothetical protein YP_002949090.1 KEGG: afl:Aflv_1887 uncharacterized conserved protein, contains two CXXC motifs YP_002949091.1 PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class V; KEGG: gka:GK1065 lysine decarboxylase (LDC) YP_002949092.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: gtn:GTNG_0930 2-nitropropane dioxygenase-releated protein YP_002949093.1 PFAM: protein of unknown function UPF0223; KEGG: gtn:GTNG_0931 hypothetical protein YP_002949094.1 KEGG: gka:GK1067 hypothetical protein YP_002949095.1 PFAM: inositol monophosphatase; KEGG: gtn:GTNG_0933 inositol monophosphatase family protein YP_002949096.1 KEGG: gka:GK1069 hypothetical protein YP_002949097.1 TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; Miro domain protein; elongation factor Tu domain 2 protein; KEGG: gtn:GTNG_0935 GTP-binding protein TypA YP_002949098.1 KEGG: gka:GK1071 hypothetical protein YP_002949099.1 KEGG: gka:GK1072 hypothetical protein YP_002949100.1 KEGG: gka:GK1073 hypothetical protein YP_002949101.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: afl:Aflv_1877 hypothetical protein YP_002949102.1 TIGRFAM: sporulation lipoprotein, YhcN/YlaJ family; KEGG: gtn:GTNG_0939 lipoprotein YP_002949103.1 KEGG: gka:GK3302 transposase YP_002949104.1 KEGG: gka:GK1076 hypothetical protein YP_002949105.1 depletion of this protein in Bacillus subtilis results in defects in cell morphology; crystal structure of Staphylococcus protein shows homodimer; ligand binding protein YP_002949106.1 PFAM: cell cycle protein; KEGG: gtn:GTNG_0943 cell-division protein YP_002949107.1 biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate YP_002949108.1 PFAM: cytochrome oxidase assembly; KEGG: gka:GK1080 heme O oxygenase YP_002949109.1 converts protoheme IX and farnesyl diphosphate to heme O YP_002949110.1 KEGG: gtn:GTNG_0947 cytochrome Caa3-type oxidase II; TIGRFAM: cytochrome C oxidase subunit II; PFAM: cytochrome C class I; cytochrome C oxidase subunit II; cytochrome C oxidase subunit II transmembrane region YP_002949111.1 KEGG: afl:Aflv_1867 cytochrome Caa3 oxidase (subunit I); TIGRFAM: cytochrome C oxidase subunit I; PFAM: cytochrome C oxidase subunit I YP_002949112.1 PFAM: cytochrome C oxidase subunit III; KEGG: gka:GK1084 cytochrome C oxidase subunit III YP_002949113.1 KEGG: gtn:GTNG_0950 cytochrome Caa3-type oxidase IV; TIGRFAM: cytochrome C oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV YP_002949114.1 TIGRFAM: cytochrome C oxidase assembly factor CtaG; KEGG: gtn:GTNG_0951 CtaG protein YP_002949115.1 PFAM: protein of unknown function DUF420; KEGG: gka:GK1087 hypothetical protein YP_002949116.1 KEGG: gka:GK1088 hypothetical protein YP_002949117.1 PFAM: protein of unknown function YugN-like; KEGG: gka:GK1089 hypothetical protein YP_002949118.1 PFAM: SCP-like extracellular; KEGG: gka:GK1091 hypothetical protein YP_002949119.1 KEGG: gtn:GTNG_0957 hypothetical protein YP_002949120.1 KEGG: gtn:GTNG_0958 hypothetical protein YP_002949121.1 KEGG: gka:GK1094 hypothetical protein YP_002949122.1 PFAM: protein of unknown function DUF1333; KEGG: gka:GK1095 hypothetical protein YP_002949123.1 KEGG: gka:GK1096 hypothetical protein YP_002949124.1 KEGG: gtn:GTNG_0962 hypothetical protein YP_002949125.1 TIGRFAM: methyltransferase; PFAM: protein of unknown function methylase KEGG: afl:Aflv_1851 N6-adenine-specific methylase YP_002949126.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA YP_002949127.1 TIGRFAM: sporulation integral membrane protein YlbJ; PFAM: nucleoside recognition protein; KEGG: gtn:GTNG_0965 hypothetical protein YP_002949128.1 PFAM: patatin; KEGG: gtn:GTNG_0966 phospholipase YP_002949129.1 PFAM: PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; KEGG: gtn:GTNG_0967 YlbL protein YP_002949130.1 PFAM: protein of unknown function DUF795; KEGG: gtn:GTNG_0968 hypothetical protein YP_002949131.1 PFAM: protein of unknown function DUF177; KEGG: gka:GK1104 hypothetical protein YP_002949132.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not YP_002949133.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: afl:Aflv_1843 enoyl-CoA hydratase YP_002949134.1 TIGRFAM: transcription factor, RsfA family; KEGG: gtn:GTNG_0972 DNA-binding protein YP_002949135.1 Ketopantoate reductase; catalyzes the NADPH reduction of Ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis YP_002949136.1 KEGG: gtn:GTNG_0974 hypothetical protein YP_002949137.1 KEGG: gtn:GTNG_0975 hypothetical protein YP_002949138.1 TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: gka:GK1111 S-adenosyl-methyltransferase MraW YP_002949139.1 TIGRFAM: cell division protein FtsL; PFAM: septum formation initiator; KEGG: gtn:GTNG_0977 cell division protein FtsL protein YP_002949140.1 KEGG: gtn:GTNG_0978 high molecular weight penicillin binding protein; PFAM: penicillin-binding protein transpeptidase; PASTA domain containing protein; Penicillin-binding protein dimerisation domain; SMART: PASTA domain containing protein YP_002949141.1 KEGG: gtn:GTNG_0979 stage V sporulation protein D; TIGRFAM: stage V sporulation protein D; PFAM: penicillin-binding protein transpeptidase; PASTA domain containing protein; Penicillin-binding protein dimerisation domain; SMART: PASTA domain containing protein YP_002949142.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate YP_002949143.1 KEGG: gtn:GTNG_0981 hypothetical protein YP_002949144.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan YP_002949145.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation YP_002949146.1 TIGRFAM: stage V sporulation protein E; cell division protein FtsW; rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: gtn:GTNG_0984 stage V sporulation protein E YP_002949147.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis YP_002949148.1 PFAM: polypeptide-transport-associated domain protein FtsQ-type; cell division protein FtsQ; KEGG: gtn:GTNG_0985 cell-division initiation protein (septum formation) YP_002949149.1 PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: gka:GK3439 transposase YP_002949150.1 PFAM: protein of unknown function DUF881; KEGG: gtn:GTNG_0986 hypothetical protein YP_002949151.1 PFAM: protein of unknown function DUF881; KEGG: gtn:GTNG_0987 hypothetical protein YP_002949152.1 PFAM: protein of unknown function DUF1290; KEGG: gtn:GTNG_0988 small basic protein YP_002949153.1 TIGRFAM: cell division protein FtsA; PFAM: cell division protein FtsA; KEGG: gtn:GTNG_0989 cell division protein FtsA YP_002949154.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function YP_002949155.1 TIGRFAM: sigma-E processing peptidase SpoIIGA; PFAM: peptidase U4 sporulation factor SpoIIGA; KEGG: gtn:GTNG_0991 sporulation specific protein SpoIIGA YP_002949156.1 sigma-29; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the mother cell at the onset of sporulation YP_002949157.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed after engulfment; this factor is involved in the transcription of small acid-soluble proteins involved in protecting the forespore chromatin YP_002949158.1 TIGRFAM: sporulation protein, YlmC/YmxH family; PFAM: PRC-barrel domain protein; KEGG: gtn:GTNG_0994 hypothetical protein YP_002949159.1 PFAM: protein of unknown function DUF152; KEGG: gka:GK1130 hypothetical protein YP_002949160.1 PFAM: alanine racemase domain protein; KEGG: gtn:GTNG_0996 hypothetical protein YP_002949161.1 PFAM: protein of unknown function DUF552; KEGG: gka:GK1132 hypothetical protein YP_002949162.1 PFAM: protein of unknown function YGGT; KEGG: gtn:GTNG_0998 hypothetical protein YP_002949163.1 PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: gtn:GTNG_0999 RNA binding protein YP_002949164.1 PFAM: DivIVA family protein; KEGG: gtn:GTNG_1000 cell division protein DivIVA YP_002949165.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme YP_002949166.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis YP_002949167.1 KEGG: gka:GK1146 hypothetical protein; TIGRFAM: pseudouridine synthase; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_002949168.1 regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity YP_002949169.1 TIGRFAM: uracil-xanthine permease; PFAM: xanthine/uracil/vitamin C permease; KEGG: gka:GK1148 uracil transporter YP_002949170.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis YP_002949171.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis YP_002949172.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers YP_002949173.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity YP_002949174.1 responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the pyrD subunit to the ultimate electron acceptor NAD(+) YP_002949175.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway, using a flavin nucleotide as an essential cofactor; subclass 1B is a heterotetramer consisting of two PyrDB subunits, similar to the PyrDsubunit alphas and two PyrK subunits YP_002949176.1 type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase YP_002949177.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate YP_002949178.1 PFAM: protein of unknown function DUF820; KEGG: gka:GK1162 hypothetical protein YP_002949179.1 PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; KEGG: afl:Aflv_1798 fibronectin/fibrinogen-binding protein YP_002949180.1 TIGRFAM: calcium-translocating P-type ATPase, PMCA-type; ATPase P; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; haloacid dehalogenase; KEGG: gtn:GTNG_1017 cation-transporting ATPase, E1-E2 family YP_002949181.1 PFAM: protein of unknown function UPF0236; KEGG: gka:GK1720 hypothetical protein YP_002949182.1 PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: gtn:GTNG_1018 hypothetical protein YP_002949183.1 PFAM: protein of unknown function DUF370; KEGG: gka:GK1166 hypothetical protein YP_002949184.1 Essential for recycling GMP and indirectly, cGMP YP_002949185.1 Promotes RNA polymerase assembly; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and subunit alphas YP_002949186.1 KEGG: gtn:GTNG_1022 phosphopantothenate-cysteine ligase; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; flavoprotein YP_002949187.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity YP_002949188.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+) YP_002949189.1 TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: gtn:GTNG_1025 methionyl-tRNA formyltransferase YP_002949190.1 TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: gtn:GTNG_1026 16S rRNA m(5)C 967 methyltransferase YP_002949191.1 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance YP_002949192.1 PFAM: protein phosphatase 2C-like; stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: gtn:GTNG_1028 protein phosphatase 2C, family protein YP_002949193.1 PFAM: serine/threonine protein kinase-related; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase; tyrosine protein kinase; PASTA domain containing protein; KEGG: gka:GK1176 serine/threonine protein kinase YP_002949194.1 EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity YP_002949195.1 KEGG: afl:Aflv_1784 pentose-5-phosphate-3-epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase YP_002949196.1 TIGRFAM: thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase catalytic region; Thiamin pyrophosphokinase vitamin B1-binding region; KEGG: gtn:GTNG_1032 thiamin pyrophosphokinase YP_002949197.1 involved in the production of the spore cortex and coat YP_002949198.1 required for 70S ribosome assembly YP_002949199.1 PFAM: protein of unknown function DUF322; KEGG: gtn:GTNG_1034 alkaline-shock protein YP_002949200.1 PFAM: Dak phosphatase; KEGG: gtn:GTNG_1035 hypothetical protein YP_002949201.1 KEGG: afl:Aflv_1778 L-serine dehydratase (beta chain); TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, beta subunit; PFAM: serine dehydratase beta chain; amino acid-binding ACT domain protein YP_002949202.1 KEGG: gtn:GTNG_1037 L-serine dehydratase (alpha chain); TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, alpha subunit; PFAM: serine dehydratase alpha chain YP_002949203.1 catalyzes branch migration in Holliday junction intermediates YP_002949204.1 negative regulator of genes involved in fatty acid and phospholipid biosynthesis for gram positive bacteria YP_002949205.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY YP_002949206.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase; KEGG: gtn:GTNG_1042 malonyl CoA-acyl carrier protein transacylase (FabD) YP_002949207.1 catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_002949208.1 carries the fatty acid chain in fatty acid biosynthesis YP_002949209.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity YP_002949210.1 TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: gka:GK1193 chromosome segregation ATPase (SMC) YP_002949211.1 KEGG: afl:Aflv_1767 signal recognition particle GTPase; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: ATPase AAA YP_002949212.1 PFAM: helix-turn-helix protein YlxM/p13 family protein; KEGG: gka:GK1195 hypothetical protein YP_002949213.1 KEGG: afl:Aflv_1765 signal recognition particle GTPase; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: ATPase AAA YP_002949214.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity YP_002949215.1 KEGG: gtn:GTNG_1051 nucleic acid binding protein YP_002949216.1 KEGG: gka:GK1199 hypothetical protein YP_002949217.1 Essential for efficient processing of 16S rRNA YP_002949218.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA YP_002949219.1 TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19; KEGG: afl:Aflv_1759 ribosomal protein L19 YP_002949220.1 KEGG: gtn:GTNG_1056 type I signal peptidase; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein YP_002949221.1 essential GTPase; functions in ribosome assembly; binds a unique part of the 23S rRNA; interacts with ribosomal protein L25(Ctc) YP_002949222.1 PFAM: ribonuclease HII/HIII; KEGG: gtn:GTNG_1058 ribonuclease HII YP_002949223.1 KEGG: gtn:GTNG_1059 hypothetical protein YP_002949224.1 KEGG: gtn:GTNG_1060 flagellar biosynthesis YP_002949225.1 catalyzes the interconversion of succinyl-CoA and succinate YP_002949226.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle YP_002949227.1 TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: gtn:GTNG_1063 DNA processing protein (smf family) YP_002949228.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity YP_002949229.1 TIGRFAM: gid protein; PFAM: glucose-inhibited division protein A; KEGG: afl:Aflv_1749 NAD(FAD)-utilizing enzyme possibly involved in translation (glucose-inhibited division protein) YP_002949230.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs YP_002949231.1 heat shock protein involved in degradation of misfolded proteins YP_002949232.1 heat shock protein involved in degradation of misfolded proteins YP_002949233.1 CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase (By similarity). It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor YP_002949234.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod; Vibrio parahaemolyticus protein is associated with the polar flagella YP_002949235.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod YP_002949236.1 forms a junction between the M-ring and FlgB during flagella biosynthesis YP_002949237.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod YP_002949238.1 One of three proteins involved in switching the direction of the flagellar rotation YP_002949239.1 binds to and inhibits the function of flagella specific ATPase FliI YP_002949240.1 involved in type III protein export during flagellum assembly YP_002949241.1 rod/hook and filament chaperone YP_002949242.1 KEGG: gtn:GTNG_1077 hypothetical protein YP_002949243.1 PFAM: flagellar hook-length control protein; KEGG: afl:Aflv_1735 flagellar hook-length control protein FliK YP_002949244.1 acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod YP_002949245.1 makes up the distal portion of the flagellar basal body rod YP_002949246.1 PFAM: flagellar FlbD family protein; KEGG: gtn:GTNG_1081 flagellar protein D YP_002949247.1 interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring YP_002949248.1 with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation YP_002949249.1 One of three proteins involved in switching the direction of the flagellar rotation YP_002949250.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: gtn:GTNG_1085 two-component response regulator YP_002949251.1 structural component of the flagellum that anchors the rod to the membrane YP_002949252.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus YP_002949253.1 with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus YP_002949254.1 FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus YP_002949255.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export YP_002949256.1 membrane protein involved in the flagellar export apparatus YP_002949257.1 positive regulator of class III flagellar genes YP_002949258.1 PFAM: cobyrinic acid ac-diamide synthase; KEGG: afl:Aflv_1719 antiactivator of flagellar biosynthesis FleN, an ATPase YP_002949259.1 regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins YP_002949260.1 PFAM: ATP-binding region ATPase domain protein; P2 response regulator binding domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; CheW domain protein; SMART: Hpt domain protein; ATP-binding region ATPase domain protein; CheW domain protein; KEGG: afl:Aflv_1717 chemotaxis protein histidine kinase YP_002949261.1 PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: gka:GK1243 chemotaxis signal transduction protein YP_002949262.1 PFAM: CheC domain protein; KEGG: gka:GK1244 chemotactic methyltransferase inhibitor YP_002949263.1 stimulates methylation of MCP proteins; PFAM: CheD family protein; KEGG: afl:Aflv_1714 chemotaxis protein; stimulates methylation of MCP proteins by CheR YP_002949264.1 expressed in late exponential phase; controls the expression of genes coding cell surface proteins involved in chemotaxis, flagellar assembly, and autolysis YP_002949265.1 KEGG: afl:Aflv_1711 hypothetical protein YP_002949266.1 KEGG: afl:Aflv_1710 hypothetical protein YP_002949267.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit YP_002949268.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu YP_002949269.1 Catalyzes the phosphorylation of UMP to UDP YP_002949270.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs YP_002949271.1 catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate YP_002949272.1 PFAM: phosphatidate cytidylyltransferase; KEGG: afl:Aflv_1704 phosphatidate cytidylyltransferase (CDP-diglyceride synthase) YP_002949273.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate YP_002949274.1 KEGG: gtn:GTNG_1110 hypothetical protein; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein YP_002949275.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro) YP_002949276.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; required for leading strand synthesis; PolC exhibits 3' to 5' exonuclease activity YP_002949277.1 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins YP_002949278.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination YP_002949279.1 PFAM: protein of unknown function DUF448; KEGG: gka:GK1261 hypothetical protein YP_002949280.1 PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG: gtn:GTNG_1116 hypothetical protein YP_002949281.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex YP_002949282.1 PFAM: protein of unknown function DUF503; KEGG: afl:Aflv_1694 hypothetical protein YP_002949283.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock YP_002949284.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs YP_002949285.1 catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities YP_002949286.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence YP_002949287.1 PFAM: 3' exoribonuclease; RNA binding S1 domain protein; polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; Exoribonuclease, phosphorolytic domain 2; KH type 1 domain protein; SMART: RNA binding S1 domain protein; KH domain protein; KEGG: gka:GK1269 polynucleotide phosphorylase/polyadenylase YP_002949288.1 TIGRFAM: sporulation protein, polysaccharide deacetylase family; PFAM: polysaccharide deacetylase; KEGG: gka:GK1270 deacetylase YP_002949289.1 PFAM: peptidase M16 domain protein; KEGG: gtn:GTNG_1125 processing peptidase-like protein YP_002949290.1 TIGRFAM: sporulation protein, YlmC/YmxH family; PFAM: PRC-barrel domain protein; KEGG: gtn:GTNG_1126 hypothetical protein YP_002949291.1 catalyzes the synthesis of dipicolinic acid from dihydroxydipicolinic acid; plays a role in spore heat resistance YP_002949292.1 involved in production of dipicolinic acid (pyridine-2,6-dicarboxylic acid, DPA) which is synthesized late in sporulation in the mother cell and accumulates in the spore; mutations in this gene result in a lack of DPA synthesis; presumably functions with SpoVFA to form the synthase enzyme YP_002949293.1 TIGRFAM: transposase, IS605 OrfB family; transposase; PFAM: transposase IS605 OrfB; KEGG: noc:Noc_2686 transposase YP_002949294.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde YP_002949295.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; diaminopimelate sensitive YP_002949296.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis YP_002949297.1 PFAM: beta-lactamase; RNA-metabolising metallo-beta-lactamase; KEGG: gka:GK1278 hypothetical protein YP_002949298.1 PFAM: peptidase S14 ClpP; KEGG: gtn:GTNG_1133 translocation-enhancing protein YP_002949299.1 KEGG: gka:GK1280 hypothetical protein YP_002949300.1 PFAM: cell divisionFtsK/SpoIIIE; SMART: ATPase AAA; KEGG: gtn:GTNG_1135 DNA translocase YP_002949301.1 PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: gka:GK1282 GntR family transcriptional regulator YP_002949302.1 PFAM: basic membrane lipoprotein; KEGG: gtn:GTNG_1137 CD4+ T cell-stimulating antigen, lipoprotein YP_002949303.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gtn:GTNG_1138 sugar ABC transporter ATP-binding protein YP_002949304.1 PFAM: inner-membrane translocator; KEGG: gka:GK1285 sugar ABC transporter (permease) YP_002949305.1 PFAM: inner-membrane translocator; KEGG: gka:GK1286 sugar ABC transporter (permease) YP_002949306.1 PFAM: peptidase M16 domain protein; KEGG: gtn:GTNG_1141 zinc protease YP_002949307.1 PFAM: peptidase M16 domain protein; KEGG: gtn:GTNG_1142 zinc protease YP_002949308.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_002949309.1 KEGG: gka:GK1290 hypothetical protein YP_002949310.1 PFAM: amino acid-binding ACT domain protein; KEGG: gka:GK1291 hypothetical protein YP_002949311.1 SMART: helix-turn-helix domain protein; KEGG: gtn:GTNG_1146 hypothetical protein YP_002949312.1 KEGG: gka:GK1293 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (phosphatidylglycerophosphate synthase) (PGP synthase); TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase YP_002949313.1 TIGRFAM: competence/damage-inducible protein CinA; molybdenum cofactor synthesis protein; PFAM: damage inducible protein CinA; molybdopterin binding domain; KEGG: gka:GK1294 competence damage-inducible protein A YP_002949314.1 PFAM: RecA domain protein; KEGG: gka:GK1295 hypothetical protein YP_002949315.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); KEGG: gka:GK1296 group II intron reverse transcriptase/maturase YP_002949316.1 KEGG: gtn:GTNG_1149 RecA2 protein; TIGRFAM: recA protein; PFAM: RecA domain protein YP_002949317.1 protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP YP_002949318.1 PFAM: metallophosphoesterase; KEGG: gtn:GTNG_1152 IG hypothetical 15594 YP_002949319.1 PFAM: stage V sporulation protein S; KEGG: gka:GK1299 stage V sporulation protein S YP_002949320.1 PFAM: peptidase M19 renal dipeptidase; KEGG: gtn:GTNG_1154 renal dipeptidase family protein YP_002949321.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: afl:Aflv_1525 2-oxoglutarate ferredoxin oxidoreductase, subunit alpha YP_002949322.1 catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin YP_002949323.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A) YP_002949324.1 PFAM: protein of unknown function DUF1333; KEGG: gka:GK1304 hypothetical protein YP_002949325.1 KEGG: gtn:GTNG_1159 spore coat protein E YP_002949326.1 PFAM: acetone carboxylase subunit gamma; KEGG: azc:AZC_2921 acetone carboxylase subunit gamma YP_002949327.1 This protein performs the mismatch recognition step during the DNA repair process YP_002949328.1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex YP_002949329.1 KEGG: bld:BLi01580 YozG YP_002949330.1 PFAM: protein of unknown function DUF161; KEGG: lsp:Bsph_4761 hypothetical protein YP_002949332.1 KEGG: bcz:BCZK1697 amino acid permease YP_002949333.1 PFAM: NLP/P60 protein; peptidoglycan-binding LysM; SMART: peptidoglycan-binding LysM; KEGG: gtn:GTNG_1162 phosphatase-associated protein YP_002949334.1 KEGG: bwe:BcerKBAB4_5553 carbohydrate-binding and sugar hydrolysis YP_002949335.1 KEGG: bwe:BcerKBAB4_5552 lipoprotein YP_002949336.1 KEGG: bwe:BcerKBAB4_5551 hypothetical protein YP_002949337.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bwe:BcerKBAB4_5550 ABC transporter YP_002949338.1 TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: gtn:GTNG_1163 glycine betaine transporter YP_002949339.1 PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: gtn:GTNG_1164 permease, MDR related YP_002949340.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: gka:GK1311 methyl-accepting chemotaxis protein YP_002949341.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity YP_002949342.1 Stimulates the elongation of poly(A) tails YP_002949343.1 KEGG: gka:GK1314 spore formation protein; TIGRFAM: stage V sporulation protein K; PFAM: ATPase AAA; SMART: AAA ATPase YP_002949344.1 activates fatty acids by binding to coenzyme A YP_002949345.1 PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: gtn:GTNG_1171 probable acyl-coA dehydrogenase YP_002949346.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: gtn:GTNG_1172 hypothetical protein YP_002949347.1 PFAM: AMP-dependent synthetase and ligase; KEGG: gtn:GTNG_1173 medium-chain-fatty-acid-CoA ligase YP_002949348.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: afl:Aflv_1513 3-hydroxyacyl-CoA dehydrogenase YP_002949349.1 TIGRFAM: acetyl-CoA acetyltransferase; PFAM: thiolase; KEGG: afl:Aflv_1512 acetyl-CoA acetyltransferase YP_002949350.1 PFAM: protein of unknown function UPF0126; KEGG: afl:Aflv_1511 predicted membrane protein YP_002949351.1 TIGRFAM: GTP-binding proten HflX; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KEGG: afl:Aflv_1510 GTP-binding protein protease modulator YP_002949352.1 PFAM: aluminum resistance protein; Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: afl:Aflv_1509 cystathionine beta-lyase family protein involved in aluminum resistance YP_002949353.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: gka:GK1326 transcriptional repressor of glutamine synthetase YP_002949354.1 KEGG: gtn:GTNG_1182 glutamine synthetase; TIGRFAM: glutamine synthetase; PFAM: glutamine synthetase; glutamine synthetase beta-Grasp YP_002949355.1 Represses a number of genes involved in the response to DNA damage YP_002949356.1 PFAM: peptidoglycan-binding LysM; SMART: peptidoglycan-binding LysM; KEGG: gtn:GTNG_1184 hypothetical protein YP_002949357.1 PFAM: Resolvase domain; KEGG: gka:GK1330 resolvase YP_002949358.1 PFAM: protein of unknown function DUF896; KEGG: gka:GK1331 hypothetical protein YP_002949359.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; transposase IS891/IS1136/IS1341 family; KEGG: gka:GK2338 transposase YP_002949360.1 TIGRFAM: transketolase; PFAM: transketolase central region; transketolase; KEGG: gka:GK1332 transketolase YP_002949361.1 KEGG: gtn:GTNG_1188 hypothetical protein YP_002949362.1 PFAM: protein of unknown function UPF0154; KEGG: gtn:GTNG_1189 hypothetical protein YP_002949363.1 PFAM: ABC transporter; ABC transporter transmembrane region; SMART: ATPase AAA; KEGG: gtn:GTNG_1190 ABC transporter ATP-binding/permease YP_002949364.1 PFAM: ABC transporter; ABC transporter transmembrane region; SMART: ATPase AAA; KEGG: gka:GK1336 ABC transporter ATP-binding protein YP_002949365.1 KEGG: gtn:GTNG_1192 hypothetical protein YP_002949366.1 PFAM: cytochrome C biogenesis protein transmembrane region; KEGG: gtn:GTNG_1194 cytochrome C biogenesis protein CcdA YP_002949367.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: afl:Aflv_1499 CheY-like receiver domain protein YP_002949368.1 PFAM: protein of unknown function DUF1453; KEGG: gka:GK1341 hypothetical protein YP_002949369.1 KEGG: gtn:GTNG_1197 hypothetical protein YP_002949370.1 PFAM: cell wall hydrolase SleB; peptidoglycan-binding LysM; SMART: peptidoglycan-binding LysM; KEGG: gka:GK1343 hypothetical protein YP_002949371.1 PFAM: protein of unknown function UPF0236; KEGG: gka:GK1720 hypothetical protein YP_002949372.1 KEGG: bay:RBAM_017770 CotM YP_002949373.1 SASP P; found in forespore compartment YP_002949374.1 KEGG: gka:GK1345 hypothetical protein YP_002949375.1 TIGRFAM: transposase, IS605 OrfB family; transposase; PFAM: transposase IS605 OrfB; KEGG: noc:Noc_2686 transposase YP_002949376.1 Catalyzes the conversion of citrate to isocitrate YP_002949377.1 TIGRFAM: small, acid-soluble spore protein L; KEGG: gka:GK1348 hypothetical protein YP_002949378.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: gka:GK1350 hypothetical protein YP_002949379.1 KEGG: gka:GK1351 hypothetical protein YP_002949380.1 KEGG: gka:GK1352 hypothetical protein YP_002949381.1 KEGG: gka:GK1354 hypothetical protein YP_002949382.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: gtn:GTNG_1212 major cold shock protein CspB YP_002949383.1 KEGG: afl:Aflv_1484 hypothetical protein YP_002949384.1 PFAM: SpoOM family protein; KEGG: gka:GK1358 sporulation control protein YP_002949385.1 TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: gka:GK1359 glycerol uptake facilitator YP_002949386.1 Converts glycerol and ADP to glycerol-3-phosphate and ADP YP_002949387.1 KEGG: bcy:Bcer98_0555 oligopeptide/dipeptide ABC transporter ATPase; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_002949388.1 PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; KEGG: bwe:BcerKBAB4_0573 ABC transporter related YP_002949389.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bwe:BcerKBAB4_0572 binding-protein-dependent transporters inner membrane component YP_002949390.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bcy:Bcer98_0552 binding-protein-dependent transport systems inner membrane component YP_002949391.1 PFAM: extracellular solute-binding protein family 5; KEGG: bcy:Bcer98_0551 extracellular solute-binding protein YP_002949392.1 KEGG: gtn:GTNG_1218 hypothetical protein YP_002949393.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gka:GK1362 hypothetical protein YP_002949394.1 TIGRFAM: membrane protein AbrB duplication; PFAM: ammonia monooxygenase; KEGG: gka:GK1526 hypothetical protein YP_002949395.1 PFAM: thioesterase superfamily protein; KEGG: gtn:GTNG_1221 thioesterase family protein YP_002949396.1 TIGRFAM: formiminoglutamase; PFAM: arginase/agmatinase/formiminoglutamase; KEGG: gtn:GTNG_1223 formiminoglutamase YP_002949397.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: gka:GK1366 hypothetical protein YP_002949398.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; transposase IS891/IS1136/IS1341 family; KEGG: gka:GK2338 transposase YP_002949399.1 catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism YP_002949400.1 catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway YP_002949401.1 PFAM: nucleoside recognition protein; KEGG: gtn:GTNG_1227 hypothetical protein YP_002949402.1 homopentamer; channel that opens in response to pressure or hypoosmotic shock YP_002949403.1 PFAM: transposase IS4 family protein; KEGG: drm:Dred_2628 transposase, IS4 family protein YP_002949404.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: gtn:GTNG_1230 YeeE/YedE family protein YP_002949405.1 PFAM: SMC domain protein; KEGG: cch:Cag_1302 ATPase-like YP_002949406.1 KEGG: npu:Npun_F4180 zinc finger SWIM domain-containing protein YP_002949407.1 PFAM: ATPase associated with various cellular activities AAA_5; KEGG: gka:GK1378 hypothetical protein YP_002949408.1 PFAM: protein of unknown function DUF524; KEGG: gka:GK1379 hypothetical protein YP_002949409.1 PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: afl:Aflv_1640 predicted pyrophosphatase YP_002949410.1 PFAM: transposase IS66; KEGG: gka:GK2663 transposase YP_002949411.1 PFAM: protein of unkown function DUF1819 inner membrane; KEGG: esi:Exig_0312 hypothetical protein YP_002949412.1 PFAM: Domain of unknown function DUF1788; KEGG: ppd:Ppro_2290 hypothetical protein YP_002949413.1 KEGG: esi:Exig_0314 hypothetical protein YP_002949414.1 PFAM: Eco57I restriction endonuclease; KEGG: chy:CHY_2653 restriction enzyme YP_002949415.1 PFAM: PglZ domain protein; KEGG: chy:CHY_2652 hypothetical protein YP_002949416.1 PFAM: helicase; SNF2-related protein; type III restriction protein res subunit; SMART: helicase; DEAD-like helicases; KEGG: pth:PTH_2441 DNA/RNA helicase YP_002949417.1 KEGG: tme:Tmel_1087 ATP-dependent OLD family endonuclease YP_002949418.1 KEGG: cth:Cthe_1779 hypothetical protein YP_002949420.1 KEGG: gtn:GTNG_3251 hypothetical protein YP_002949421.1 KEGG: lbl:LBL_1552 hypothetical protein YP_002949422.1 PFAM: NERD domain protein; DNA topoisomerase type IA zn finger domain protein; KEGG: fjo:Fjoh_3691 NERD domain-containing protein YP_002949423.1 KEGG: hypothetical protein YP_002949424.1 KEGG: nth:Nther_2520 hypothetical protein YP_002949425.1 KEGG: nth:Nther_2519 hypothetical protein YP_002949427.1 KEGG: bwe:BcerKBAB4_0780 hypothetical protein YP_002949428.1 KEGG: hypothetical protein YP_002949429.1 TIGRFAM: GABA permease; PFAM: amino acid permease-associated region; Spore germination protein; KEGG: gtn:GTNG_1284 gamma-aminobutyrate permease YP_002949430.1 PFAM: purine catabolism PurC domain protein; KEGG: gka:GK1425 hypothetical protein YP_002949431.1 TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: gka:GK1426 aldehyde dehydrogenase YP_002949432.1 PFAM: aminotransferase class-III; KEGG: gtn:GTNG_1286 aminotransferase YP_002949433.1 KEGG: gka:GK1395 hypothetical protein YP_002949434.1 PFAM: protein of unknown function DUF820; KEGG: gka:GK1321 hypothetical protein YP_002949435.1 KEGG: gka:GK1374 hypothetical protein YP_002949436.1 PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: gka:GK3439 transposase YP_002949437.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; transposase IS891/IS1136/IS1341 family; KEGG: gka:GK2338 transposase YP_002949438.1 PFAM: SEC-C motif domain protein; KEGG: gtn:GTNG_3191 hypothetical protein YP_002949440.1 KEGG: gka:GK3263 hypothetical protein YP_002949441.1 KEGG: gtn:GTNG_3194 helicase, PFAM: SNF2-related protein; helicase; SMART: DEAD-like helicases ; helicase domain protein YP_002949442.1 PFAM: zinc finger SWIM domain protein; KEGG: gtn:GTNG_3193 hypothetical membrane associated protein YP_002949443.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; transposase IS891/IS1136/IS1341 family; KEGG: gka:GK2338 transposase YP_002949444.1 KEGG: gtn:GTNG_2794 hypothetical protein YP_002949445.1 PFAM: protein of unknown function DUF820; KEGG: afl:Aflv_0555 endonuclease, Uma2 family (restriction endonuclease fold) YP_002949446.1 KEGG: gka:GK1374 hypothetical protein YP_002949447.1 KEGG: gtn:GTNG_3191 hypothetical protein YP_002949448.1 PFAM: acetamidase/Formamidase; KEGG: gka:GK1391 acetamidase/formamidase YP_002949449.1 KEGG: cef:CE0022 hypothetical protein YP_002949450.1 PFAM: amidase; KEGG: gka:GK1392 glutamyl-tRNA(Gln) amidotransferase subunit A YP_002949451.1 TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES; KEGG: gka:GK1429 hypothetical protein YP_002949452.1 KEGG: ctc:CTC01762 dihydroxyacetone kinase; TIGRFAM: dihydroxyacetone kinase subunit K; PFAM: Dak kinase YP_002949453.1 TIGRFAM: dihydroxyacetone kinase subunit L; PFAM: Dak phosphatase; KEGG: oih:OB2473 hypothetical protein YP_002949454.1 TIGRFAM: dihydroxyacetone kinase, phosphotransfer subunit; PFAM: PTS system fructose subfamily IIA component; KEGG: cno:NT01CX_0687 dihydroxyacetone kinase, phosphotransfer subunit YP_002949455.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: gka:GK1430 LysR family transcriptional regulator YP_002949456.1 PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase subunit alpha domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: gka:GK1431 glutamate synthaselarge subunit YP_002949457.1 glutamate synthase is composed of subunits alpha and beta; subunit beta is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the subunit alpha, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate YP_002949458.1 PFAM: OsmC family protein; KEGG: dth:DICTH_0075 hypothetical protein YP_002949459.1 TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; KEGG: gtn:GTNG_0665 molybdopterin (MPT) converting factor, subunit 1 YP_002949460.1 PFAM: molybdopterin biosynthesis MoaE protein; KEGG: gka:GK0774 molybdopterin converting factor (subunit 2) YP_002949461.1 KEGG: gtn:GTNG_0659 molybdenum cofactor biosynthesis protein A; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: radical SAM domain protein; molybdenum cofactor synthesis protein; SMART: Elongator protein 3/MiaB/NifB YP_002949462.1 PFAM: transcription activator effector binding; KEGG: lsp:Bsph_1734 AraC/XylS family transcriptional regulator YP_002949463.1 KEGG: pna:Pnap_4386 hypothetical protein YP_002949464.1 KEGG: ade:Adeh_3280 hypothetical protein YP_002949465.1 KEGG: bld:BLi04224 hypothetical protein YP_002949466.1 PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: gka:GK1433 hypothetical protein YP_002949467.1 KEGG: gtn:GTNG_1295 hypothetical protein YP_002949468.1 PFAM: beta-lactamase; KEGG: gtn:GTNG_1288 beta-lactamase (cephalosporinase) YP_002949469.1 PFAM: glycoside hydrolase; KEGG: gtn:GTNG_1289 beta-hexosamidase A precursor YP_002949470.1 PFAM: conserved hypothetical protein; KEGG: gtn:GTNG_1290 hypothetical protein YP_002949471.1 PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: gtn:GTNG_2048 transposase YP_002949472.1 PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: gka:GK3439 transposase YP_002949473.1 PFAM: fructosamine kinase; aminoglycoside phosphotransferase; KEGG: gtn:GTNG_1297 hypothetical protein YP_002949474.1 Modulates the activities of several enzymes which are inactive in their acetylated form YP_002949475.1 TIGRFAM: intracellular protease PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: gka:GK1438 intracellular proteinase YP_002949476.1 PFAM: protein of unknown function DUF6 transmembrane; protein of unknown function DUF250; KEGG: gtn:GTNG_1300 transporter EamA family YP_002949477.1 PFAM: DSBA oxidoreductase; KEGG: bca:BCE_2002 2-hydroxychromene-2-carboxylate isomerase family protein YP_002949478.1 PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: gka:GK1440 malic enzyme YP_002949479.1 TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family; PFAM: nucleotidyltransferase substrate binding protein HI0074; KEGG: cbk:CLL_A2111 nucleotidyltransferase substrate binding protein, family YP_002949480.1 PFAM: DNA polymerase beta domain protein region; KEGG: afl:Aflv_1199 predicted nucleotidyltransferase YP_002949481.1 PFAM: ATPase associated with various cellular activities AAA_5; KEGG: mgi:Mflv_3198 ATPase YP_002949482.1 KEGG: mgi:Mflv_3197 McrBC 5-methylcytosine restriction system component-like protein YP_002949483.1 PFAM: transposase IS4 family protein; KEGG: gtn:GTNG_2075 transposase YP_002949484.1 PFAM: glycerol-3-phosphate responsive antiterminator; KEGG: afl:Aflv_1595 glycerol-3-phosphate responsive antiterminator (mRNA-binding) YP_002949485.1 PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA; KEGG: afl:Aflv_1594 ABC-type glycerol-3-phosphate transporter, ATPase component YP_002949486.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: afl:Aflv_1593 ABC-type glycerol-3-phosphate transporter permease YP_002949487.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: afl:Aflv_1592 ABC-type glycerol-3-phosphate transporter, permease YP_002949488.1 PFAM: extracellular solute-binding protein family 1; KEGG: afl:Aflv_1591 ABC-type glycerol-3-phosphate transporter, periplasmic component YP_002949489.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: afl:Aflv_1590 glycerophosphoryl diester phosphodiesterase YP_002949490.1 PFAM: amino acid permease-associated region; KEGG: afl:Aflv_1288 amino acid transporter YP_002949491.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: bld:BLi01509 KinE YP_002949492.1 PFAM: periplasmic solute binding protein; KEGG: afl:Aflv_1289 ABC-type Mn2+ transporter, periplasmic component/surface adhesin YP_002949493.1 KEGG: afl:Aflv_1290 Manganese ABC transporter ATpase YP_002949494.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: afl:Aflv_1290 Manganese ABC transporter ATpase YP_002949495.1 PFAM: ABC transporter; KEGG: bsu:BSU30750 manganese ABC transporter membrane protein YP_002949496.1 PFAM: ABC transporter; KEGG: afl:Aflv_1292 ABC-type Mn2+ transporter, permease YP_002949498.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; transposase IS891/IS1136/IS1341 family; KEGG: gka:GK2338 transposase YP_002949499.1 PFAM: transposase IS4 family protein; KEGG: npu:Npun_BR216 hypothetical protein YP_002949500.1 PFAM: restriction endonuclease; KEGG: gka:GK1390 hypothetical protein YP_002949501.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; phosphotransferase system lactose/cellobiose-specific IIsubunit beta; Helix-turn-helix type 11 domain protein; PRD domain protein; KEGG: bha:BH0220 hypothetical protein YP_002949502.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: bha:BH0221 hypothetical protein YP_002949503.1 PFAM: phosphotransferase system lactose/cellobiose-specific IIsubunit beta; KEGG: bha:BH0222 hypothetical protein YP_002949504.1 membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr YP_002949505.1 PFAM: aryldialkylphosphatase; KEGG: bha:BH0225 hypothetical protein YP_002949506.1 PFAM: creatininase; KEGG: bha:BH0226 creatinine amidohydrolase YP_002949507.1 KEGG: lin:lin2795 hypothetical protein YP_002949508.1 KEGG: gka:GK1441 hypothetical protein YP_002949509.1 PFAM: transposase IS4 family protein; KEGG: drm:Dred_2628 transposase, IS4 family protein YP_002949510.1 KEGG: afl:Aflv_2105 transposase YP_002949511.1 PFAM: transposase IS4 family protein; KEGG: afl:Aflv_2377 transposase YP_002949512.1 PFAM: protein of unknown function UPF0236; KEGG: gka:GK1720 hypothetical protein YP_002949513.1 KEGG: gka:GK1812 hypothetical protein YP_002949514.1 KEGG: gka:GK1811 hypothetical protein YP_002949515.1 KEGG: bcz:BCZK0822 hypothetical protein YP_002949516.1 PFAM: FAD dependent oxidoreductase; KEGG: gtn:GTNG_1252 D-amino acid dehydrogenase small subunit YP_002949517.1 PFAM: SEC-C motif domain protein; KEGG: gka:GK1375 hypothetical protein YP_002949518.1 PFAM: transposase IS4 family protein; KEGG: npu:Npun_BR216 hypothetical protein YP_002949519.1 PFAM: transposase IS66; KEGG: gka:GK2663 transposase YP_002949520.1 malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate YP_002949521.1 PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: gtn:GTNG_2048 transposase YP_002949522.1 TIGRFAM: branched-chain amino acid transporter II carrier protein; PFAM: branched-chain amino acid transporter II carrier protein; KEGG: gtn:GTNG_3188 branched-chain amino acid transporter carrier protein YP_002949523.1 TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: afl:Aflv_1389 Na+/alanine symporter YP_002949524.1 PFAM: transcriptional coactivator/pterin dehydratase; KEGG: gka:GK1984 pterin-4-alpha-carbinolamine dehydratase (pterin carbinolamine dehydratase) YP_002949525.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate YP_002949526.1 KEGG: afl:Aflv_1572 ABC-type multidrug transporter, permease YP_002949527.1 PFAM: regulatory protein TetR; KEGG: afl:Aflv_1571 transcriptional regulator, TetR/AcrR family YP_002949528.1 PFAM: Na+/H+ antiporter NhaC; TRAP C4-dicarboxylate transporter permease DctM subunit; KEGG: bcy:Bcer98_1155 Na+ antiporter NhaC YP_002949529.1 TIGRFAM: transposase, IS605 OrfB family; transposase; PFAM: transposase IS605 OrfB; KEGG: noc:Noc_2686 transposase YP_002949530.1 KEGG: bld:BLi03408 YraG YP_002949531.1 TIGRFAM: polysaccharide deacetylase family sporulation protein PdaB; PFAM: polysaccharide deacetylase; KEGG: afl:Aflv_1209 polysaccharide deacetylase YP_002949532.1 PFAM: formate/nitrite transporter; KEGG: afl:Aflv_1436 formate/nitrite family of transporters YP_002949533.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: bpu:BPUM_0506 GntR family transcriptional regulator YP_002949534.1 PFAM: transposase IS66; KEGG: gka:GK2663 transposase YP_002949535.1 PFAM: amino acid permease-associated region; KEGG: gtn:GTNG_1539 aromatic amino acid permease YP_002949536.1 PFAM: protein of unknown function DUF606; KEGG: gtn:GTNG_1521 hypothetical protein YP_002949537.1 KEGG: btk:BT9727_3179 hypothetical protein YP_002949538.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: gtn:GTNG_3252 transcriptional regulator YP_002949539.1 PFAM: glycosidase PH1107-related; KEGG: gtn:GTNG_3202 hypothetical protein YP_002949540.1 PFAM: extracellular solute-binding protein family 1; KEGG: gka:GK3274 sugar ABC transporter (sugar-binding protein) YP_002949541.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gka:GK3273 sugar ABC transporter (permease) YP_002949542.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gtn:GTNG_3204 sugar ABC transporter (permease) YP_002949543.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; KEGG: dth:DICTH_1692 beta-mannosidase YP_002949544.1 PFAM: YceI family protein; KEGG: gtn:GTNG_1880 hypothetical protein YP_002949545.1 PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: gtn:GTNG_1879 transcriptional regulator RpiR family YP_002949546.1 catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway YP_002949547.1 PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: gtn:GTNG_1877 PTS system, sucrose-specific IIBC component YP_002949548.1 PFAM: protein of unknown function DUF871; KEGG: gtn:GTNG_1876 hypothetical protein YP_002949549.1 PFAM: YcbB domain protein; response regulator receiver; SMART: response regulator receiver; KEGG: gka:GK1981 two-component response regulator YP_002949550.1 PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: gka:GK1980 two-component sensor histidine kinase YP_002949551.1 TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gka:GK1979 glutamine ABC transporter (permease) YP_002949552.1 TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gka:GK1978 glutamine ABC transporter (permease) YP_002949553.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; KEGG: gka:GK1977 glutamine ABC transporter (glutamine-binding protein) YP_002949554.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK1976 glutamine ABC transporter ATP-binding protein YP_002949555.1 PFAM: Auxin Efflux Carrier; KEGG: gtn:GTNG_1838 transporter YP_002949556.1 PFAM: alkaline phosphatase; SMART: alkaline phosphatase; KEGG: bwe:BcerKBAB4_3057 alkaline phosphatase YP_002949557.1 PFAM: protein of unknown function UPF0236; KEGG: gka:GK1720 hypothetical protein YP_002949558.1 KEGG: gtn:GTNG_1837 transcriptional regulator; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_002949559.1 KEGG: gtn:GTNG_1836 gluconokinase; TIGRFAM: gluconate kinase; PFAM: carbohydrate kinase FGGY YP_002949560.1 TIGRFAM: gluconate transporter; PFAM: gluconate transporter; citrate transporter; KEGG: bca:BCE_2303 gluconate transporter permease YP_002949561.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gka:GK1924 hypothetical protein YP_002949563.1 PFAM: aldehyde dehydrogenase; KEGG: gka:GK1919 aldehyde dehydrogenase YP_002949564.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_002949565.1 PFAM: protein of unknown function DUF820; KEGG: gka:GK3449 hypothetical protein YP_002949566.1 PFAM: protein of unknown function UPF0118; KEGG: bcy:Bcer98_1483 hypothetical protein YP_002949567.1 KEGG: nth:Nther_1911 PAS modulated sigma54 specific Fis family transcriptional regulator; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; hypothetical protein; PAS fold domain protein; SMART: AAA ATPase; PAS domain containing protein YP_002949568.1 PFAM: aldehyde dehydrogenase; acyl-CoA reductase; KEGG: lsp:Bsph_4659 aldehyde-dehydrogenase like protein YP_002949569.1 PFAM: beta-lactamase; KEGG: lsp:Bsph_3377 hypothetical protein YP_002949570.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: gka:GK1871 alcohol dehydrogenase YP_002949571.1 KEGG: gka:GK1862 hypothetical protein YP_002949572.1 KEGG: gka:GK1861 hypothetical protein YP_002949573.1 PFAM: transposase IS4 family protein; KEGG: gka:GK2942 hypothetical protein YP_002949574.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: gka:GK1860 transcriptional regulator YP_002949575.1 PFAM: endonuclease I; KEGG: gka:GK1851 hypothetical protein YP_002949576.1 PFAM: sodium symporter; KEGG: gtn:GTNG_1741 transmembrane transporter YP_002949577.1 PFAM: FeoA family protein; KEGG: gtn:GTNG_1740 probable ferrous iron transporter A YP_002949578.1 TIGRFAM: ferrous iron transporter B; small GTP-binding protein; PFAM: Ferrous iron transporter B domain protein; GTP-binding protein HSR1-related; nucleoside recognition protein; ferrous iron transporter; KEGG: gtn:GTNG_1739 ferrous iron transporter B YP_002949579.1 KEGG: gtn:GTNG_1738 hypothetical protein YP_002949580.1 PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: gtn:GTNG_1728 fructose repressor YP_002949581.1 KEGG: gtn:GTNG_1727 1-phosphofructokinase; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein YP_002949582.1 TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose subfamily, IIsubunit alpha; PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose-specific IIsubunit beta; phosphotransferase system EIIC; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: gtn:GTNG_1726 PTS system, fructose-specific enzyme II, BCcomponent YP_002949583.1 KEGG: gka:GK3306 transposase of IS642-like element YP_002949584.1 KEGG: gka:GK0175 transposase YP_002949585.1 KEGG: bha:BH2520 transposase related protein (20) YP_002949586.1 PFAM: transposase IS4 family protein; KEGG: gtn:GTNG_3446 IS982 family transposase YP_002949587.1 PFAM: permease; KEGG: gka:GK1837 hypothetical protein YP_002949588.1 PFAM: protein of unknown function DUF1980; KEGG: gka:GK1836 hypothetical protein YP_002949589.1 KEGG: gka:GK1835 hypothetical protein YP_002949590.1 PFAM: protein of unknown function UPF0047; KEGG: gka:GK1834 hypothetical protein YP_002949591.1 TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: gka:GK1833 methionyl aminopeptidase YP_002949592.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gka:GK1832 two-component sensor histidine kinase YP_002949593.1 KEGG: gka:GK1831 metal-dependent protease YP_002949594.1 KEGG: gka:GK1830 hypothetical protein YP_002949595.1 catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; functions in tetrapyrrole and heme biosynthesis YP_002949596.1 PFAM: hemerythrin HHE cation binding domain protein; KEGG: gtn:GTNG_1716 hypothetical protein YP_002949597.1 KEGG: gtn:GTNG_1715 respiratory nitrate reductase gamma chain; TIGRFAM: respiratory nitrate reductase, subunit gamma; PFAM: nitrate reductase subunit gamma YP_002949598.1 TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; PFAM: nitrate reductase subunit delta; KEGG: gtn:GTNG_1714 nitrate reductase subunit delta YP_002949599.1 KEGG: gtn:GTNG_1712 respiratory nitrate reductase alpha subunit; TIGRFAM: nitrate reductase, subunit alpha; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region YP_002949600.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: gka:GK1826 hypothetical protein YP_002949601.1 KEGG: gka:GK1823 hypothetical protein YP_002949602.1 PFAM: hypothetical protein; KEGG: gka:GK1822 stage III sporulation protein J YP_002949603.1 PFAM: isochorismatase hydrolase; KEGG: gka:GK1820 pyrazinamidase/nicotinamidase YP_002949604.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate YP_002949605.1 TIGRFAM: oligoendopeptidase F; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; oligopeptidase F; KEGG: gtn:GTNG_1704 oligoendopeptidase F YP_002949606.1 PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: gka:GK3439 transposase YP_002949607.1 regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity YP_002949608.1 KEGG: gka:GK1810 cobalamin biosynthesis protein YP_002949609.1 catalyzes the ATP-dependent transport of cobalt YP_002949610.1 periplasmic cobalt binding component of the cobalt transporter YP_002949611.1 TIGRFAM: cobalt ABC transporter inner membrane subunit CbiQ; PFAM: cobalt transporter; KEGG: gka:GK1807 cobalt transporter system (permease) YP_002949612.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK1806 cobalt ABC transporter ATP-binding protein YP_002949613.1 TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; nitrite and sulphite reductase 4Fe-4S region; KEGG: afl:Aflv_2180 precorrin-3B methylase CobJ fused to 4Fe-4S reductase domain YP_002949614.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: gtn:GTNG_1693 Cbi protein YP_002949615.1 PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: gka:GK3439 transposase YP_002949616.1 TIGRFAM: precorrin-6x reductase; PFAM: precorrin-6x reductase CbiJ/CobK; KEGG: gka:GK1803 precorrin-6x reductase YP_002949617.1 PFAM: precorrin-8X methylmutase CbiC/CobH; KEGG: gtn:GTNG_1691 cobalamin biosynthesis protein CbiC YP_002949618.1 Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A YP_002949619.1 KEGG: gka:GK1800 precorrin-6Y C5,15-methyltransferase [decarboxylating] (precorrin-6 methyltransferase); TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_002949620.1 TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: afl:Aflv_2174 precorrin-2 methylase YP_002949621.1 TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: gka:GK1798 precorrin-4 methylase YP_002949622.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: afl:Aflv_2172 cobalamin biosynthesis protein CbiG YP_002949623.1 responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid YP_002949624.1 catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation YP_002949625.1 KEGG: gka:GK1793 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase YP_002949626.1 TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: gtn:GTNG_1682 uroporphyrin-III C-methyltransferase-like protein YP_002949627.1 KEGG: gtn:GTNG_1681 ATP:corrinoid adenosyltransferase; TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP YP_002949628.1 KEGG: gka:GK1790 hypothetical protein YP_002949629.1 KEGG: bce:BC3041 hypothetical protein YP_002949630.1 PFAM: methyltransferase type 11; methionine biosynthesis MetW protein; UbiE/COQ5 methyltransferase; methyltransferase type 12; KEGG: afl:Aflv_1467 SAM-dependent methyltransferase YP_002949631.1 catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis YP_002949632.1 KEGG: gka:GK1786 hypothetical protein YP_002949633.1 PFAM: glutathione peroxidase; KEGG: gka:GK1785 glutathione peroxidase YP_002949634.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bcy:Bcer98_1613 ABC transporter-related protein YP_002949635.1 PFAM: PBS lyase HEAT domain protein repeat-containing protein; SMART: PBS lyase HEAT domain protein repeat-containing protein; KEGG: gka:GK1784 hypothetical protein YP_002949636.1 PFAM: protein of unknown function DUF1094; KEGG: gtn:GTNG_1676 hypothetical protein YP_002949637.1 KEGG: gka:GK1780 hypothetical protein YP_002949638.1 KEGG: gka:GK1779 aspartate aminotransferase YP_002949639.1 TIGRFAM: transposase, IS605 OrfB family; transposase; PFAM: transposase IS605 OrfB; KEGG: noc:Noc_2686 transposase YP_002949640.1 KEGG: gtn:GTNG_1673 hypothetical protein YP_002949641.1 KEGG: gka:GK1777 hypothetical protein YP_002949642.1 ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived YP_002949643.1 PFAM: dihydrofolate reductase region; KEGG: gka:GK1775 dihydrofolate reductase YP_002949644.1 KEGG: gtn:GTNG_1669 hypothetical protein YP_002949645.1 catalyzes the formation of 2-oxobutanoate from L-threonine; biosynthetic YP_002949646.1 KEGG: gtn:GTNG_1667 hypothetical protein YP_002949647.1 TIGRFAM: transposase, IS605 OrfB family; transposase; PFAM: transposase IS605 OrfB; KEGG: noc:Noc_2686 transposase YP_002949648.1 TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: gka:GK1771 hypothetical protein YP_002949649.1 PFAM: electron transporter SCO1/SenC; KEGG: gtn:GTNG_1666 SCO1/SenC family lipoprotein YP_002949650.1 PFAM: lipolytic protein G-D-S-L family; KEGG: gka:GK1769 hypothetical protein YP_002949651.1 KEGG: gka:GK1768 hypothetical protein YP_002949652.1 TIGRFAM: RNA methylase, NOL1/NOP2/sun family; PFAM: Fmu (Sun) domain protein; methyltransferase; KEGG: gtn:GTNG_1663 tRNA and rRNA cytosine-C5-methylase YP_002949653.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX YP_002949654.1 PFAM: OsmC family protein; KEGG: gtn:GTNG_1661 hypothetical protein YP_002949655.1 catalyzes the release of the N-terminal amino acid from a tripeptide YP_002949656.1 KEGG: gtn:GTNG_1657 hypothetical protein YP_002949657.1 PFAM: oxidoreductase molybdopterin binding; KEGG: gtn:GTNG_1656 sulfite oxidase-like protein YuiH YP_002949659.1 KEGG: bld:BLi03797 YunG YP_002949660.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gtn:GTNG_2800 hypothetical protein YP_002949661.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bcy:Bcer98_1556 GCN5-related N-acetyltransferase YP_002949662.1 PFAM: protein of unknown function UPF0157; KEGG: lsp:Bsph_3139 hypothetical protein YP_002949663.1 KEGG: oih:OB0789 hypothetical protein YP_002949664.1 TIGRFAM: transposase, IS605 OrfB family; transposase; PFAM: transposase IS605 OrfB; KEGG: noc:Noc_2686 transposase YP_002949665.1 PFAM: purine or other phosphorylase family 1; KEGG: aoe:Clos_2375 purine phosphorylase family 1 YP_002949666.1 KEGG: esi:Exig_1642 hypothetical protein YP_002949667.1 Catalyzes the transfer of electrons from NADH to ubiquinone YP_002949668.1 KEGG: gka:GK0443 hypothetical protein YP_002949669.1 KEGG: gtn:GTNG_1651 hypothetical protein YP_002949670.1 PFAM: ABC transporter; KEGG: gka:GK1754 ABC transporter YP_002949671.1 PFAM: protein of unknown function UPF0236; KEGG: gka:GK1720 hypothetical protein YP_002949672.1 PFAM: CoA-binding protein; KEGG: gka:GK1752 hypothetical protein YP_002949673.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling YP_002949674.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling YP_002949675.1 KEGG: gtn:GTNG_1645 MerR family transcriptional regulator YP_002949676.1 TIGRFAM: PTS system, trehalose-specific IIBC subunit; PTS system, maltose and glucose-specific subfamily, IIC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: gtn:GTNG_1644 PTS system, trehalose-specific enzyme II, BCcomponent YP_002949677.1 KEGG: afl:Aflv_1440 trehalose-6-phosphate hydrolase; TIGRFAM: alpha,alpha-phosphotrehalase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_002949678.1 KEGG: gtn:GTNG_1642 transcriptional regulator GntR family; TIGRFAM: trehalose operon repressor; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_002949679.1 PFAM: Na+/H+ antiporter NhaC; KEGG: gtn:GTNG_1641 hypothetical protein YP_002949680.1 PFAM: thioesterase superfamily protein; KEGG: gtn:GTNG_1640 hypothetical protein YP_002949681.1 PFAM: aminotransferase class V; KEGG: gtn:GTNG_1639 aminotransferase YP_002949682.1 PFAM: acyl-CoA dehydrogenase type 2 domain; acyl-CoA dehydrogenase domain protein; KEGG: gtn:GTNG_1638 short-chain-specific acyl-CoA dehydrogenase YP_002949683.1 TIGRFAM: spermidine synthase; PFAM: Spermine synthase; KEGG: gka:GK1740 spermidine synthase(putrescine aminopropyltransferase) YP_002949684.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: gka:GK1738 hypothetical protein YP_002949685.1 TIGRFAM: methionine-R-sulfoxide reductase; peptide methionine sulfoxide reductase; PFAM: methionine sulfoxide reductase B; methionine sulfoxide reductase A; KEGG: sth:STH1761 bifunctional methionine sulfoxide reductase A/B protein YP_002949686.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine YP_002949687.1 PFAM: replication terminator protein; KEGG: gka:GK1735 replication terminator protein YP_002949688.1 PFAM: ATPase associated with various cellular activities AAA_5; ATPase AAA; SMART: AAA ATPase; KEGG: afl:Aflv_1432 MoxR-like ATPase YP_002949689.1 SMART: von Willebrand factor A; KEGG: afl:Aflv_1431 nitric oxide reductase activation protein YP_002949690.1 KEGG: gtn:GTNG_1629 hypothetical protein YP_002949691.1 KEGG: gtn:GTNG_1628 hypothetical protein YP_002949692.1 PFAM: integrase; integrase domain protein SAM domain protein; KEGG: gtn:GTNG_1626 integrase/recombinase YP_002949693.1 PFAM: integrase; KEGG: gtn:GTNG_1625 hypothetical protein YP_002949694.1 KEGG: hypothetical protein YP_002949695.1 KEGG: fma:FMG_1372 type I restriction-modification system restriction subunit; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: protein of unknown function DUF450; type III restriction protein res subunit; SMART: DEAD-like helicases YP_002949696.1 PFAM: restriction modification system DNA specificity domain; KEGG: ecw:EcE24377A_0287 type I restriction modification DNA specificity domain-containing protein YP_002949697.1 PFAM: N-6 DNA methylase; KEGG: sha:SH0064 type I restriction-modification system DNA methylase YP_002949698.1 KEGG: bli:BL02385 hypothetical protein YP_002949699.1 PFAM: protein of unknown function DUF450; KEGG: mja:MJECL40 type I restriction enzyme subunit R YP_002949700.1 KEGG: cph:Cpha266_1605 hypothetical protein YP_002949701.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: ckl:CKL_2007 hypothetical protein YP_002949704.1 KEGG: gtn:GTNG_1622 hypothetical protein YP_002949705.1 PFAM: integrase catalytic region; KEGG: gka:GK0167 transposase of IS653-like element YP_002949706.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: gtn:GTNG_1609 two-component response regulator YP_002949707.1 PFAM: transposase mutator type; KEGG: gtn:GTNG_0322 transposase (04) YP_002949709.1 PFAM: blue (type 1) copper domain protein; KEGG: gka:GK0892 hypothetical protein YP_002949710.1 KEGG: aoe:Clos_2043 hypothetical protein YP_002949711.1 PFAM: major facilitator superfamily MFS_1; KEGG: sak:SAK_0299 major facilitator family transporter YP_002949712.1 TIGRFAM: amino acid adenylation protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: bwe:BcerKBAB4_5618 amino acid adenylation domain-containing protein YP_002949713.1 PFAM: transposase mutator type; KEGG: gtn:GTNG_0322 transposase (04) YP_002949715.1 PFAM: nucleotidyl transferase; KEGG: gka:GK3304 mannose-6-phosphate isomerase YP_002949716.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: mba:Mbar_A0035 GDP-fucose synthetase YP_002949717.1 PFAM: transposase IS4 family protein; KEGG: npu:Npun_BR216 hypothetical protein YP_002949718.1 PFAM: transposase IS4 family protein; KEGG: gka:GK3310 transposase YP_002949719.1 PFAM: transposase IS4 family protein; KEGG: gtn:GTNG_3446 IS982 family transposase YP_002949721.1 PFAM: purine or other phosphorylase family 1; KEGG: sso:SSO2706 5'-methylthioadenosine phosphorylase (MtaP) YP_002949722.1 PFAM: peptidase S51 dipeptidase E; KEGG: bha:BH0697 hypothetical protein YP_002949723.1 KEGG: vfi:VF_1334 oxalate/formate antiporter YP_002949724.1 KEGG: afl:Aflv_1670 transposon related protein, Zn-finger domain YP_002949725.1 PFAM: integrase catalytic region; transposase-like Mu; KEGG: afl:Aflv_1669 transposase YP_002949726.1 SMART: ATPase AAA; KEGG: gka:GK0881 hypothetical protein YP_002949728.1 PFAM: NUDIX hydrolase; KEGG: esi:Exig_0301 NUDIX hydrolase YP_002949730.1 KEGG: gka:GK1727 hypothetical protein YP_002949731.1 KEGG: gtn:GTNG_1620 permease YP_002949732.1 PFAM: transposase mutator type; KEGG: gtn:GTNG_0322 transposase (04) YP_002949733.1 PFAM: multicopper oxidase type 3; multicopper oxidase type 1; multicopper oxidase type 2; KEGG: gtn:GTNG_1618 multicopper oxidase family protein YP_002949734.1 TIGRFAM: copper ion binding protein; PFAM: Heavy metal transport/detoxification protein; KEGG: gka:GK0903 mercuric ion-binding protein YP_002949735.1 PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: gka:GK3439 transposase YP_002949736.1 PFAM: protein of unknown function DUF156; KEGG: gka:GK0901 hypothetical protein YP_002949737.1 KEGG: gka:GK0898 hypothetical protein YP_002949739.1 KEGG: afl:Aflv_1216 hypothetical protein YP_002949740.1 KEGG: afl:Aflv_1215 hypothetical protein YP_002949741.1 SMART: ATPase AAA; KEGG: gka:GK1917 hypothetical protein YP_002949742.1 KEGG: gka:GK0892 hypothetical protein YP_002949743.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: gka:GK0891 LysR family transcriptional regulator YP_002949744.1 PFAM: conserved hypothetical protein; KEGG: gka:GK0890 hypothetical protein YP_002949745.1 KEGG: gka:GK0889 hypothetical protein YP_002949746.1 PFAM: transglycosylase; KEGG: gka:GK0886 hypothetical protein YP_002949747.1 TIGRFAM: ATPase P; ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: gka:GK0352 cadmium-transporting ATPase YP_002949748.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: gka:GK0584 cadmium efflux system accessory protein (cadmium-binding protein) YP_002949749.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: afl:Aflv_2450 Retron-type reverse transcriptase YP_002949750.1 KEGG: gtn:GTNG_1613 hypothetical protein YP_002949751.1 PFAM: cytochrome C biogenesis protein transmembrane region; KEGG: gtn:GTNG_1612 hypothetical protein YP_002949752.1 PFAM: glycosyl hydrolase BNR repeat-containing protein; KEGG: gtn:GTNG_1611 BNR repeat domain protein YP_002949753.1 PFAM: hypothetical protein; KEGG: gtn:GTNG_1610 hypothetical protein YP_002949754.1 PFAM: histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: gtn:GTNG_1608 two component system histidine kinase YP_002949755.1 KEGG: lsp:Bsph_2007 N-carbamoyl-L-amino acid hydrolase YP_002949756.1 PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: afl:Aflv_2104 transposase YP_002949757.1 KEGG: bwe:BcerKBAB4_0165 hypothetical protein YP_002949758.1 PFAM: FAD linked oxidase; KEGG: bce:BC0201 L-gulonolactone oxidase YP_002949759.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: afl:Aflv_1418 dehydrogenase YP_002949760.1 KEGG: gka:GK0589 arsenate reductase; TIGRFAM: arsenate reductase (thioredoxin); PFAM: protein-tyrosine phosphatase, low molecular weight; SMART: protein-tyrosine phosphatase, low molecular weight YP_002949761.1 KEGG: afl:Aflv_1953 methyl-accepting chemotaxis protein YP_002949762.1 TIGRFAM: molybdenum ABC transporter periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: bce:BC0221 molybdate-binding protein YP_002949763.1 TIGRFAM: DNA binding domain protein, excisionase family; KEGG: bwe:BcerKBAB4_0187 DNA binding domain-containing protein YP_002949764.1 TIGRFAM: molybdate ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: pca:Pcar_0230 molybdate porter YP_002949765.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: pth:PTH_0677 ABC-type molybdate transporter, ATPase component YP_002949766.1 PFAM: amino acid permease-associated region; Spore germination protein; KEGG: bca:BCE_0660 amino acid permease family protein YP_002949768.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bat:BAS4107 HAD superfamily hydrolase YP_002949769.1 PFAM: ABC transporter; KEGG: afl:Aflv_1419 ABC-type molybdenum transporter, ATPase component YP_002949770.1 TIGRFAM: lipoyltransferase and lipoate-protein ligase; PFAM: biotin/lipoate A/B protein ligase; KEGG: bha:BH0683 lipoate-protein ligase YP_002949771.1 TIGRFAM: transposase, IS605 OrfB family; transposase; PFAM: transposase IS605 OrfB; KEGG: noc:Noc_2686 transposase YP_002949772.1 PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: afl:Aflv_2104 transposase YP_002949773.1 KEGG: afl:Aflv_1344 iron-sulfur protein of HCP family YP_002949774.1 KEGG: bha:BH2943 hypothetical protein; TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: radical SAM protein YP_002949775.1 PFAM: membrane-flanked domain; KEGG: gtn:GTNG_1541 hypothetical protein YP_002949776.1 PFAM: membrane-flanked domain; KEGG: bay:RBAM_004930 YdbS YP_002949777.1 TIGRFAM: YhgE/Pip N-terminal domain protein; YhgE/Pip C-terminal domain protein; KEGG: gtn:GTNG_1522 phage infection protein YP_002949778.1 PFAM: protein of unknown function DUF988; KEGG: bat:BAS1509 hypothetical protein YP_002949779.1 PFAM: transposase mutator type; KEGG: pth:PTH_2357 transposase and inactivated derivatives YP_002949780.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function YP_002949781.1 TIGRFAM: transposase, IS605 OrfB family; transposase; PFAM: transposase IS605 OrfB; KEGG: noc:Noc_2686 transposase YP_002949782.1 PFAM: protein of unknown function DUF21; hypothetical protein; transporter-associated region; KEGG: afl:Aflv_2366 hemolysin-like protein containing CBS domain YP_002949783.1 PFAM: peptidase membrane zinc metallopeptidase KEGG: afl:Aflv_2341 predicted Zn-dependent protease YP_002949784.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: afl:Aflv_2367 MerR family transcriptional regulator YP_002949786.1 PFAM: regulatory protein TetR; KEGG: gtn:GTNG_1508 TetR family transcriptional regulator/AcrR family YP_002949787.1 KEGG: gtn:GTNG_1507 acetyl-CoA acetyltransferase YP_002949788.1 PFAM: MaoC domain protein dehydratase; KEGG: gtn:GTNG_1506 hypothetical protein YP_002949789.1 KEGG: gka:GK1656 hypothetical protein YP_002949790.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gka:GK1655 short chain oxidoreductase YP_002949791.1 KEGG: gtn:GTNG_1503 acyl-CoA dehydrogenase YP_002949792.1 Modulates the activities of several enzymes which are inactive in their acetylated form YP_002949793.1 PFAM: amino acid permease-associated region; KEGG: bat:BAS0596 amino acid permease family protein YP_002949794.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: oih:OB0932 L-2-haloalkanoic acid dehalogenase YP_002949795.1 PFAM: GCN5-related N-acetyltransferase; KEGG: esi:Exig_1490 GCN5-related N-acetyltransferase YP_002949796.1 PFAM: protein of unknown function DUF350; KEGG: bwe:BcerKBAB4_1502 hypothetical protein YP_002949797.1 PFAM: glutathionylspermidine synthase; KEGG: bcy:Bcer98_1313 glutathionylspermidine synthase YP_002949798.1 KEGG: bcz:BCZK1457 group-specific protein YP_002949799.1 KEGG: bcy:Bcer98_1311 hypothetical protein YP_002949800.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bld:BLi00739 YjcK YP_002949801.1 PFAM: transposase IS4 family protein; KEGG: drm:Dred_2628 transposase, IS4 family protein YP_002949802.1 KEGG: lmo:lmo0821 hypothetical protein YP_002949803.1 PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: gtn:GTNG_2048 transposase YP_002949804.1 KEGG: lsp:Bsph_4536 hypothetical protein YP_002949805.1 KEGG: gtn:GTNG_3177 hypothetical protein YP_002949807.1 KEGG: bld:BLi00438 hypothetical protein YP_002949808.1 TIGRFAM: copper ion binding protein; PFAM: Heavy metal transport/detoxification protein; KEGG: afl:Aflv_1219 copper-ion-binding protein YP_002949809.1 TIGRFAM: copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper ion binding protein; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: gka:GK0902 heavy metal-transporting ATPase YP_002949810.1 PFAM: protein of unknown function DUF156; KEGG: gtn:GTNG_1614 hypothetical protein YP_002949811.1 PFAM: DNA polymerase beta domain protein region; KEGG: bcl:ABC1967 hypothetical protein YP_002949812.1 KEGG: bld:BLi03797 YunG YP_002949813.1 KEGG: csc:Csac_2298 major facilitator transporter YP_002949814.1 PFAM: transposase IS66; KEGG: gka:GK2663 transposase YP_002949815.1 PFAM: transposase IS4 family protein; KEGG: gka:GK3310 transposase YP_002949816.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; transposase IS891/IS1136/IS1341 family; KEGG: gka:GK2338 transposase YP_002949817.1 KEGG: afl:Aflv_2040 acyl carrier protein phosphodiesterase YP_002949818.1 KEGG: gtn:GTNG_1496 bacitracin transport permease BcrB YP_002949819.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gtn:GTNG_1495 bacitracin transport ATP-binding protein BcrA YP_002949820.1 PFAM: lipolytic protein G-D-S-L family; KEGG: gtn:GTNG_1494 lipase/acylhydrolase with GDSL-like motif YP_002949821.1 PFAM: beta-lactamase; KEGG: gtn:GTNG_1492 metallo-beta-lactamase family protein YP_002949822.1 PFAM: protein of unknown function DUF81; KEGG: gka:GK1638 hypothetical protein YP_002949823.1 PFAM: AIG2 family protein; KEGG: gka:GK1636 hypothetical protein YP_002949824.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: afl:Aflv_1402 cold shock protein, CspA family YP_002949825.1 PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; redoxin; KEGG: gka:GK1635 hypothetical protein YP_002949826.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; transposase IS891/IS1136/IS1341 family; KEGG: gka:GK2359 transposase YP_002949827.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: bha:BH4037 cadmium-binding protein (cadmium efflux system accessory protein) YP_002949828.1 KEGG: gtn:GTNG_1469 hypothetical protein YP_002949829.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: afl:Aflv_1398 ABC-type multidrug transporter, ATPase component YP_002949830.1 PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: gtn:GTNG_1467 acetoin transport repressor YP_002949831.1 PFAM: protein of unknown function DUF421; KEGG: lsp:Bsph_2612 hypothetical protein YP_002949832.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gka:GK1614 two-component sensor histidine kinase YP_002949833.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bcy:Bcer98_1412 hypothetical protein YP_002949834.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bat:BAS3174 EamA family protein YP_002949835.1 PFAM: protein of unknown function UPF0236; KEGG: gka:GK3431 hypothetical protein YP_002949836.1 PFAM: major facilitator superfamily MFS_1; KEGG: afl:Aflv_1581 permease of the major facilitator superfamily YP_002949837.1 KEGG: gtn:GTNG_1461 hypothetical protein YP_002949838.1 PFAM: glycosyl transferase family 51; KEGG: gka:GK1608 penicillin-binding protein, peptidoglycan glycosyltransferase YP_002949839.1 TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: gka:GK1607 multidrug resistance protein YP_002949840.1 KEGG: gtn:GTNG_1455 multidrug resistance protein A YP_002949841.1 PFAM: regulatory protein MarR; transcriptional regulator TrmB; SMART: regulatory protein MarR; KEGG: gka:GK1605 MarR family transcriptional regulator YP_002949842.1 PFAM: carboxyl transferase; KEGG: gtn:GTNG_1452 propionyl-CoA carboxylase YP_002949843.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_002949844.1 catalyzes the formation of acetoacetate and acetyl-CoA from 3-hydroxy-3-methylglutaryl-CoA YP_002949845.1 composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism YP_002949846.1 an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism YP_002949847.1 PFAM: transposase IS4 family protein; KEGG: gka:GK1010 transposase YP_002949848.1 PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: gka:GK1597 CoA dehydrogenase YP_002949849.1 PFAM: regulatory protein TetR; KEGG: gka:GK1596 TetR/AcrR family transcriptional regulator YP_002949850.1 PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: btl:BALH_4672 FMN reductase, NADPH-dependent YP_002949851.1 KEGG: gtn:GTNG_1443 hypothetical protein YP_002949853.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gka:GK1594 hypothetical protein YP_002949854.1 PFAM: transposase IS4 family protein; KEGG: npu:Npun_BR216 hypothetical protein YP_002949855.1 TIGRFAM: transposase, IS605 OrfB family; transposase; PFAM: transposase IS605 OrfB; KEGG: noc:Noc_2686 transposase YP_002949856.1 catalyzes the formation of 2-oxobutanoate from L-threonine YP_002949857.1 PFAM: major facilitator superfamily MFS_1; KEGG: gtn:GTNG_1439 multidrug-efflux transporter YP_002949858.1 TIGRFAM: transposase, IS605 OrfB family; transposase; PFAM: transposase IS605 OrfB; KEGG: noc:Noc_2686 transposase YP_002949859.1 PFAM: TatD-related deoxyribonuclease; KEGG: gka:GK0184 deoxyribonuclease YP_002949860.1 NorM; MdtK; functions as a Na(+)/drug antiporter; inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones YP_002949861.1 KEGG: bay:RBAM_011820 hypothetical protein YP_002949862.1 KEGG: gka:GK1586 hypothetical protein YP_002949863.1 TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: gtn:GTNG_1434 chloramphenicol-sensitive protein RarD YP_002949864.1 KEGG: gka:GK1587 hypothetical protein YP_002949865.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: gtn:GTNG_1430 cation efflux family protein YP_002949866.1 PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: gka:GK1581 D-alanyl-D-alanine carboxypeptidase YP_002949867.1 catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate YP_002949868.1 PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: gka:GK3439 transposase YP_002949870.1 KEGG: gka:GK1578 hypothetical protein YP_002949871.1 KEGG: gtn:GTNG_1425 hypothetical protein YP_002949872.1 KEGG: gka:GK1576 hypothetical protein YP_002949873.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; transposase IS891/IS1136/IS1341 family; KEGG: gka:GK2338 transposase YP_002949874.1 KEGG: gtn:GTNG_1421 hypothetical protein YP_002949876.1 KEGG: gka:GK1572 hypothetical protein YP_002949877.1 PFAM: protein of unknown function DUF1250; KEGG: gka:GK1571 hypothetical protein YP_002949878.1 KEGG: bha:BH1493 reductase YP_002949879.1 catalyzes the formation of biotin from dethiobiotin and sulfur 2 S-adenosyl-L-methionine YP_002949880.1 KEGG: bpu:BPUM_3399 hypothetical protein YP_002949881.1 PFAM: FAD dependent oxidoreductase; KEGG: gka:GK1569 hypothetical protein YP_002949882.1 PFAM: protein of unknown function DUF502; KEGG: gka:GK1568 hypothetical protein YP_002949883.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: gtn:GTNG_1415 magnesium and cobalt transporter YP_002949884.1 KEGG: gka:GK1566 hypothetical protein YP_002949885.1 PFAM: HesB/YadR/YfhF-family protein; KEGG: gtn:GTNG_1413 hypothetical protein YP_002949886.1 PFAM: thioesterase superfamily protein; KEGG: gtn:GTNG_1412 ComA operon protein 2 YP_002949887.1 KEGG: gka:GK1563 hypothetical protein YP_002949888.1 PFAM: thioesterase superfamily protein; KEGG: gka:GK1562 hypothetical protein YP_002949889.1 TIGRFAM: small, acid-soluble spore protein tlp; KEGG: gtn:GTNG_1409 small acid-soluble spore protein Tlp YP_002949890.1 SASP N; found in forespore compartment YP_002949891.1 KEGG: gka:GK1559 hypothetical protein YP_002949892.1 PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; electron transporter SCO1/SenC; Redoxin domain protein; KEGG: gtn:GTNG_1407 thiol:disulfide interchange protein TlpA YP_002949893.1 KEGG: gka:GK1557 hypothetical protein YP_002949894.1 PFAM: rhodanese; SMART: Rhodanese domain protein; KEGG: gtn:GTNG_1406 thiosulfate sulfurtransferase YP_002949895.1 KEGG: gtn:GTNG_1405 hypothetical protein YP_002949896.1 KEGG: gka:GK1554 hypothetical protein YP_002949897.1 KEGG: aoe:Clos_1890 hypothetical protein YP_002949898.1 PFAM: Dynamin family protein; GTP-binding protein HSR1-related; KEGG: gtn:GTNG_1404 GTPases (dynamin-related) YP_002949899.1 KEGG: gtn:GTNG_1396 hypothetical protein YP_002949900.1 PFAM: cytochrome C oxidase subunit II; blue (type 1) copper domain protein; KEGG: gka:GK1547 cytochrome C oxidase (b(o/a)3-type) chain II YP_002949901.1 PFAM: cytochrome C oxidase subunit I; KEGG: afl:Aflv_1359 cytochrome C oxidase (b(o/a)3-type) chain I YP_002949902.1 PFAM: peptidase M32 carboxypeptidase Taq metallopeptidase; KEGG: gtn:GTNG_1393 thermostable carboxypeptidase 1 YP_002949903.1 SMART: helicase c2; KEGG: gka:GK1544 ATP-dependent helicase YP_002949905.1 PFAM: RNA methylase; KEGG: afl:Aflv_1356 predicted N6-adenine-specific DNA methylase YP_002949906.1 KEGG: afl:Aflv_1355 multidomain signal transduction protein (contains PAS, GGDEF and EAL domains); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein YP_002949907.1 GpsB; guiding PBP1 shuttling; similar to DivIVA YP_002949908.1 PFAM: protein of unknown function DUF1273; KEGG: bcy:Bcer98_1280 hypothetical protein YP_002949909.1 KEGG: afl:Aflv_1353 hypothetical protein YP_002949910.1 KEGG: gtn:GTNG_1389 hypothetical protein YP_002949911.1 PFAM: DEAD/DEAH box helicase; helicase domain protein; SMART: DEAD-like helicases ; helicase; KEGG: gtn:GTNG_1388 ATP-dependent RNA helicase YP_002949912.1 PFAM: transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: gka:GK1536 IclR family transcriptional regulator YP_002949913.1 PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: gtn:GTNG_1385 malate dehydrogenase (malic enzyme) YP_002949914.1 catalyzes the formation of malate from glyoxylate and acetyl-CoA YP_002949915.1 PFAM: FAD linked oxidase; KEGG: gka:GK1532 glycolate oxidase subunit YP_002949916.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: gtn:GTNG_1382 glycolate oxidase iron-sulfur subunit YP_002949917.1 PFAM: FAD linked oxidase; KEGG: gtn:GTNG_1381 glycolate oxidase subunit YP_002949918.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: gka:GK1529 hypothetical protein YP_002949919.1 PFAM: xylose isomerase; KEGG: gtn:GTNG_1379 hydroxypyruvate isomerase protein YP_002949920.1 PFAM: transposase IS4 family protein; KEGG: drm:Dred_2628 transposase, IS4 family protein YP_002949921.1 PFAM: protein of unknown function UPF0005; KEGG: gtn:GTNG_1375 hypothetical protein YP_002949922.1 TIGRFAM: transposase, IS605 OrfB family; transposase; PFAM: transposase IS605 OrfB; KEGG: noc:Noc_2686 transposase YP_002949923.1 TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta; KEGG: gka:GK1525 cysteine synthase YP_002949924.1 KEGG: gka:GK2373 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_002949925.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: gtn:GTNG_2303 two-component response regulator YP_002949926.1 KEGG: gtn:GTNG_2304 lipoprotein YP_002949927.1 KEGG: bca:BCE_0757 proton/peptide symporter family protein; TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region; major facilitator superfamily MFS_1 YP_002949928.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: gtn:GTNG_1368 protease YP_002949930.1 PFAM: protein of unknown function UPF0236; KEGG: gka:GK3431 hypothetical protein YP_002949931.1 PFAM: amino acid permease-associated region; KEGG: btk:BT9727_2834 lysine specific permease YP_002949932.1 TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes YP_002949933.1 TIGRFAM: small acid-soluble spore protein, H-type; PFAM: small acid-soluble spore H family protein; KEGG: gka:GK1514 hypothetical protein YP_002949934.1 KEGG: gka:GK1513 hypothetical protein YP_002949935.1 PFAM: acyltransferase 3; KEGG: gtn:GTNG_1363 hypothetical protein YP_002949936.1 Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate YP_002949937.1 catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine YP_002949938.1 catalyzes the formation of 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP YP_002949939.1 PFAM: transposase IS4 family protein; KEGG: npu:Npun_BR216 hypothetical protein YP_002949940.1 PFAM: glycosyl transferase family 2; KEGG: gtn:GTNG_1359 glycosyltransferase YP_002949941.1 KEGG: gtn:GTNG_1358 hypothetical protein YP_002949942.1 activates fatty acids by binding to coenzyme A YP_002949943.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase; KEGG: bca:BCE_2897 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase YP_002949944.1 PFAM: GCN5-related N-acetyltransferase; KEGG: btl:BALH_3188 acetyltransferase YP_002949945.1 PFAM: lysine exporter (LYSE/YGGA); KEGG: bpu:BPUM_2599 LysE family L-lysine exporter YP_002949946.1 PFAM: LamB/YcsF family protein; KEGG: gka:GK1502 hypothetical protein YP_002949947.1 KEGG: gtn:GTNG_1352 allophanate hydrolase subunit 2; TIGRFAM: urea amidolyase related protein; PFAM: allophanate hydrolase subunit 2; SMART: allophanate hydrolase subunit 2 YP_002949948.1 PFAM: allophanate hydrolase subunit 1; SMART: allophanate hydrolase subunit 1; KEGG: gtn:GTNG_1351 allophanate hydrolase subunit 1 YP_002949949.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bha:BH0577 hypothetical protein YP_002949950.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: bha:BH0578 GntR family transcriptional regulator YP_002949951.1 TIGRFAM: anion transporter; PFAM: sodium/sulfate symporter; KEGG: lsp:Bsph_0838 hypothetical protein YP_002949952.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: gka:GK1497 hypothetical protein YP_002949953.1 PFAM: major facilitator superfamily MFS_1; KEGG: gtn:GTNG_1344 hypothetical protein YP_002949954.1 PFAM: thiol-disulphide oxidoreductase DCC; KEGG: bsu:BSU31500 hypothetical protein YP_002949955.1 PFAM: protein of unknown function DUF159; KEGG: gtn:GTNG_1341 hypothetical protein YP_002949957.1 KEGG: afl:Aflv_1547 hypothetical protein YP_002949958.1 PFAM: transposase IS4 family protein; KEGG: npu:Npun_BR216 hypothetical protein YP_002949959.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; transposase IS891/IS1136/IS1341 family; KEGG: gka:GK2338 transposase YP_002949960.1 PFAM: sodium/hydrogen exchanger; TrkA-C domain protein; TrkA-N domain protein; KEGG: gtn:GTNG_1339 sodium/hydrogen exchanger family protein/TrkA domain protein YP_002949961.1 PFAM: protein of unknown function DUF990; KEGG: gtn:GTNG_1335 conserved membrane protein, multidrug efflux associated YP_002949962.1 PFAM: protein of unknown function DUF990; KEGG: gka:GK1488 hypothetical protein YP_002949963.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gtn:GTNG_1333 ABC transporter ATP-binding protein YP_002949964.1 PFAM: transporter permease; KEGG: lsp:Bsph_0992 hypothetical protein YP_002949965.1 PFAM: transporter permease; KEGG: lin:lin2072 hypothetical protein YP_002949966.1 PFAM: periplasmic binding protein; KEGG: lin:lin2073 hypothetical protein YP_002949967.1 AcsA; in Sinorhizobium meliloti this enzyme is required for acetoacetate activation; similar to acetyl-CoA synthase YP_002949968.1 PFAM: FeoA family protein; KEGG: gka:GK1484 ferrous iron uptake system protein A YP_002949969.1 TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KEGG: gka:GK1483 hypothetical protein YP_002949970.1 PFAM: ferrous iron transporter; nucleoside recognition protein; Ferrous iron transporter B domain protein; KEGG: gka:GK1482 hypothetical protein YP_002949971.1 KEGG: gka:GK1478 hypothetical protein YP_002949972.1 PFAM: phosphoglycerate mutase; KEGG: gka:GK1466 phosphoglycerate mutase YP_002949973.1 PFAM: peptidase U61 LD-carboxypeptidase A; KEGG: esi:Exig_1005 peptidase U61 LD-carboxypeptidase A YP_002949974.1 PFAM: phosphoglycerate mutase; KEGG: bcz:BCZK1571 phosphoglycerate mutase family protein; fructose-2,6-bisphosphatase YP_002949975.1 KEGG: btl:BALH_2620 aminoglycoside N3'-acetyltransferase YP_002949976.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gka:GK1465 hypothetical protein YP_002949977.1 KEGG: gka:GK1464 hypothetical protein YP_002949978.1 PFAM: protein of unknown function DUF147; KEGG: lsp:Bsph_3426 hypothetical protein YP_002949979.1 KEGG: gka:GK1463 hypothetical protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; hypothetical protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein YP_002949980.1 PFAM: ferric iron reductase; KEGG: gtn:GTNG_1321 hypothetical protein YP_002949981.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gtn:GTNG_1320 iron(III) dicitrate transport ATP-binding protein YP_002949982.1 PFAM: transporter permease; KEGG: afl:Aflv_1268 ABC-type Fe3+-siderophore achromobactin transporter, permease YP_002949983.1 PFAM: transporter permease; KEGG: gka:GK1459 iron(III) dicitrate ABC transporter (permease) YP_002949984.1 PFAM: periplasmic binding protein; KEGG: gka:GK1457 iron(III) dicitrate ABC transporter (lipoprotein) YP_002949985.1 KEGG: gtn:GTNG_1316 hypothetical protein YP_002949986.1 KEGG: gka:GK1451 hypothetical protein YP_002949987.1 KEGG: gtn:GTNG_1311 hypothetical protein YP_002949988.1 KEGG: bha:BH1705 hypothetical protein YP_002949989.1 KEGG: gka:GK1448 hypothetical protein YP_002949990.1 PFAM: toxic anion resistance family protein; KEGG: gtn:GTNG_1309 tellurite resistance protein YP_002949991.1 KEGG: gka:GK1446 hypothetical protein YP_002949993.1 PFAM: protein of unknown function DUF541; KEGG: gtn:GTNG_1307 hypothetical protein YP_002949994.1 KEGG: gka:GK1444 hypothetical protein YP_002949995.1 PFAM: major facilitator superfamily MFS_1; KEGG: gtn:GTNG_1305 major facilitator family transporter YP_002949996.1 KEGG: afl:Aflv_1670 transposon related protein, Zn-finger domain YP_002949997.1 SMART: ATPase AAA; KEGG: gka:GK0881 hypothetical protein YP_002949998.1 TIGRFAM: CRISPR-associated protein Cas2; PFAM: protein of unknown function DUF196; KEGG: afl:Aflv_0771 CRISPR-associated protein Cas2 YP_002949999.1 TIGRFAM: CRISPR-associated protein Cas4; PFAM: protein of unknown function DUF83; KEGG: afl:Aflv_0769 CRISPR-associated protein Cas4 (RecB family exonuclease) YP_002950000.1 KEGG: afl:Aflv_0768 CRISPR-associated protein Cas3; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated HD domain protein; PFAM: DEAD/DEAH box helicase; helicase domain protein; SMART: helicase; DEAD-like helicases YP_002950001.1 TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; PFAM: protein of unknown function DUF522; KEGG: afl:Aflv_0767 CRISPR system related protein, RAMP superfamily YP_002950002.1 TIGRFAM: CRISPR-associated regulatory protein, DevR family; CRISPR-associated autoregulator DevR family; KEGG: afl:Aflv_0766 CRISPR system related protein YP_002950003.1 TIGRFAM: CRISPR-associated CXXC_CXXC protein Cst1; KEGG: afl:Aflv_0765 CRISPR system related protein YP_002950004.1 TIGRFAM: CRISPR-associated protein Cas6; KEGG: afl:Aflv_0764 CRISPR system related protein, RAMP superfamily YP_002950005.1 PFAM: transposase IS4 family protein; KEGG: gka:GK3310 transposase YP_002950006.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis YP_002950007.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis YP_002950008.1 PFAM: VanZ family protein; KEGG: bpu:BPUM_0774 teicoplanin resistance protein VanZ YP_002950009.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis YP_002950010.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway YP_002950011.1 KEGG: bwe:BcerKBAB4_3154 hypothetical protein YP_002950012.1 PFAM: GtrA family protein; KEGG: gka:GK2051 hypothetical protein YP_002950013.1 KEGG: afl:Aflv_1273 hypothetical protein YP_002950014.1 catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis YP_002950015.1 catalyzes the dehydration of 3-dehydroquinate to form 3-dehydroshikimate in aromatic amino acid biosynthesis YP_002950016.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase type 3; haloacid dehalogenase; sucrose-6F-phosphate phosphohydrolase; KEGG: gka:GK2059 hypothetical protein YP_002950017.1 PFAM: DNA polymerase beta domain protein region; KEGG: afl:Aflv_1199 predicted nucleotidyltransferase YP_002950018.1 TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family; PFAM: nucleotidyltransferase substrate binding protein HI0074; KEGG: cbk:CLL_A2111 nucleotidyltransferase substrate binding protein, family YP_002950019.1 PFAM: plasmid pRiA4b ORF-3 family protein; KEGG: fre:Franean1_6615 plasmid pRiA4b ORF-3 family protein YP_002950020.1 KEGG: cth:Cthe_1711 hypothetical protein YP_002950021.1 KEGG: gtn:GTNG_1992 hypothetical protein YP_002950022.1 PFAM: peptidase M42 family protein; peptidase M20; KEGG: esi:Exig_0326 peptidase M42 family protein YP_002950023.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; KEGG: aae:aq_1490 RNA polymerase sigma factor RpoD YP_002950024.1 KEGG: spl:Spea_1274 hypothetical protein YP_002950025.1 PFAM: helicase; KEGG: sth:STH1306 DNA helicase YP_002950026.1 PFAM: type III restriction protein res subunit; helicase domain protein; SMART: DEAD-like helicases ; helicase; KEGG: gtn:GTNG_2008 DNA/RNA helicase YP_002950027.1 KEGG: gka:GK2105 hypothetical protein YP_002950028.1 PFAM: transposase IS200-family protein; KEGG: amt:Amet_3817 transposase IS200-family protein YP_002950029.1 KEGG: afl:Aflv_2013 transposase; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB YP_002950030.1 KEGG: gtn:GTNG_2011 hypothetical protein YP_002950031.1 KEGG: gka:GK2124 hypothetical protein YP_002950032.1 catalyzes the formation of glutamate from glutamine YP_002950033.1 catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine YP_002950034.1 KEGG: bay:RBAM_033230 CotG YP_002950035.1 PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: gka:GK3439 transposase YP_002950036.1 PFAM: Spore coat protein CotH; KEGG: bsu:BSU36060 spore coat protein (inner) YP_002950037.1 KEGG: bay:RBAM_033210 CotB YP_002950038.1 KEGG: gka:GK1708 transposase YP_002950039.1 KEGG: gka:GK1707 hypothetical protein YP_002950040.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gtn:GTNG_2027 glyoxalase/bleomycin resistance protein/dioxygenase superfamily YP_002950041.1 KEGG: gtn:GTNG_2028 hypothetical membrane spanning protein YP_002950042.1 KEGG: sep:SE0231 fosfomycin resistance protein FosB YP_002950043.1 PFAM: transposase IS4 family protein; KEGG: gka:GK3310 transposase YP_002950044.1 PFAM: DoxX family protein; KEGG: gtn:GTNG_2031 hypothetical protein YP_002950045.1 PFAM: helix-turn-helix HxlR type; KEGG: bld:BLi00860 YodB YP_002950046.1 PFAM: 5'-3' exonuclease; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2; KEGG: afl:Aflv_1264 5'-3' exonuclease (including N-terminal domain of PolI) YP_002950047.1 TIGRFAM: transposase, IS605 OrfB family; KEGG: dau:Daud_1910 hypothetical protein YP_002950048.1 PFAM: transposase IS4 family protein; KEGG: gka:GK3310 transposase YP_002950050.1 PFAM: peptidase M29 aminopeptidase II; KEGG: gka:GK2140 leucyl aminopeptidase II YP_002950051.1 PFAM: type III restriction protein res subunit; KEGG: aeh:Mlg_1542 DEAD/DEAH box helicase domain-containing protein YP_002950052.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: apa:APP7_0747 methylation subunit, type III restriction-modification system YP_002950053.1 PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicases ; helicase; KEGG: gur:Gura_0592 helicase domain-containing protein YP_002950054.1 PFAM: transposase IS4 family protein; KEGG: gtn:GTNG_2075 transposase YP_002950055.1 KEGG: hypothetical protein YP_002950056.1 KEGG: gtn:GTNG_2081 hypothetical protein YP_002950057.1 PFAM: heat shock protein Hsp20; KEGG: gtn:GTNG_2082 stress response-like protein HSP YP_002950058.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: gtn:GTNG_2083 probable transcriptional regulator YP_002950060.1 KEGG: emi:Emin_0611 hypothetical protein YP_002950061.1 PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: gka:GK3439 transposase YP_002950062.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: gka:GK2149 UDP-glucose 4-epimerase YP_002950063.1 catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism YP_002950064.1 KEGG: gka:GK2151 hypothetical protein YP_002950065.1 PFAM: FAD dependent oxidoreductase; KEGG: gtn:GTNG_2089 glycerol-3-phosphate dehydrogenase, aerobic YP_002950066.1 PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: gka:GK3439 transposase YP_002950067.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: gka:GK3301 transposase YP_002950068.1 PFAM: transposase IS4 family protein; KEGG: npu:Npun_BR216 hypothetical protein YP_002950069.1 PFAM: glycerol-3-phosphate responsive antiterminator; KEGG: gka:GK2154 transcriptional antiterminator of glycerol uptake operon YP_002950070.1 KEGG: gka:GK2155 hypothetical protein YP_002950071.1 PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: gtn:GTNG_2091 two-component sensor histidine kinase YP_002950072.1 TIGRFAM: transposase, IS605 OrfB family; transposase; PFAM: transposase IS605 OrfB; KEGG: noc:Noc_2686 transposase YP_002950073.1 PFAM: heat shock protein Hsp20; KEGG: gtn:GTNG_2094 heat shock protein class I (low molecular weight) YP_002950075.1 KEGG: gtn:GTNG_2095 hypothetical protein YP_002950076.1 KEGG: gtn:GTNG_2096 sporulation-specific SASP protein YP_002950077.1 KEGG: gka:GK2162 hypothetical protein YP_002950078.1 KEGG: gka:GK2163 hypothetical protein YP_002950079.1 KEGG: gka:GK2164 hypothetical protein YP_002950080.1 KEGG: gka:GK2165 hypothetical protein YP_002950081.1 KEGG: gka:GK2166 hypothetical protein YP_002950082.1 functions in homologous recombination, DNA repair, and chromosome segregation; binds preferentially to three- and four-stranded DNA intermediates; introduces specific nick sites in four-stranded DNA substrates; functions similarly to Escherichia coli RuvC YP_002950083.1 TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Fibronectin type III domain protein; KEGG: gka:GK2168 penicillin-binding protein 1A/1B (pbp1) (penicillin-insensitive transglycosylase (peptidoglycan TGase); penicillin-sensitive transpeptidase (dd-transpeptidase)) YP_002950084.1 KEGG: gtn:GTNG_2103 hypothetical protein YP_002950085.1 KEGG: gka:GK2169 endonuclease III (DNA-(apurinic or apyrimidinic site) lyase); TIGRFAM: endonuclease III; PFAM: HhH-GPD family protein; helix-hairpin-helix motif; SMART: HhH-GPD family protein; iron-sulfur cluster loop YP_002950086.1 TIGRFAM: primosome, DnaD subunit; PFAM: DnaD and phage-associated region; KEGG: gtn:GTNG_2105 DNA replication protein DnaD YP_002950087.1 catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_002950088.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate YP_002950089.1 KEGG: gtn:GTNG_2108 hypothetical protein YP_002950090.1 KEGG: gtn:GTNG_2109 hypothetical protein YP_002950091.1 unwinds DNA YP_002950092.1 Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5) YP_002950093.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine YP_002950094.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate YP_002950095.1 KEGG: gka:GK2180 biotin [acetyl-CoA carboxylase] synthetase; transcriptional repressor of the biotin operon; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; biotin operon repressor; PFAM: biotin/lipoate A/B protein ligase; hypothetical protein; biotin protein ligase domain protein YP_002950096.1 catalyzes the addition and repair of the 3'-terminal CCA sequence in tRNA; these proteins belong to the CCA-adding enzyme subfamily 2 which does not have phosphohydrolase activity YP_002950097.1 PFAM: glycosyl transferase group 1; KEGG: gtn:GTNG_2116 glycosyltransferase YP_002950098.1 PFAM: LmbE family protein; KEGG: afl:Aflv_1122 N-acetylglucosaminylphosphatidylinositol de-N-acetylase related enzyme, LmbE family YP_002950099.1 catalyzes the formation of methylglyoxal from glycerone phosphate YP_002950100.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis YP_002950101.1 PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: gka:GK2186 hypothetical protein YP_002950102.1 PFAM: protein of unknown function DUF161; KEGG: gtn:GTNG_2121 hypothetical membrane spanning protein YP_002950103.1 TIGRFAM: sporulation protein YpjB; KEGG: gtn:GTNG_2122 hypothetical protein YP_002950104.1 PFAM: protein of unknown function DUF1405; KEGG: gka:GK2189 hypothetical protein YP_002950105.1 PFAM: cytochrome C class I; KEGG: gka:GK2190 menaquinol-cytochrome C reductase cytochrome b/c subunit YP_002950106.1 electron transporter YP_002950107.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: gka:GK2192 menaquinol-cytochrome C reductase iron-sulfur subunit (Rieske iron-sulfur protein) YP_002950108.1 KEGG: gka:GK2193 hypothetical protein YP_002950109.1 PFAM: protein of unknown function UPF0302 ; conserved hypothetical protein; KEGG: gtn:GTNG_2128 hypothetical protein YP_002950110.1 PFAM: hypotheticalprotein; KEGG: gka:GK2195 hypothetical protein YP_002950111.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis YP_002950112.1 catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate YP_002950113.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis YP_002950114.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis YP_002950115.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate YP_002950116.1 catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis YP_002950117.1 involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water YP_002950118.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate YP_002950119.1 with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine YP_002950120.1 TIGRFAM: chorismate mutase; PFAM: chorismate mutase of the AroH class; KEGG: gka:GK2205 chorismate mutase YP_002950121.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis YP_002950122.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis YP_002950123.1 KEGG: afl:Aflv_1097 methyl-accepting chemotaxis protein (MCP) methyltransferase; PFAM: MCP methyltransferase CheR-type; SMART: MCP methyltransferase CheR-type YP_002950124.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate YP_002950125.1 TIGRFAM: heptaprenyl diphosphate synthase component II; PFAM: polyprenyl synthetase; KEGG: gtn:GTNG_2144 component II of heptaprenyl diphosphate synthase YP_002950126.1 Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone YP_002950127.1 PFAM: Heptaprenyl diphosphate synthase subunit 1; KEGG: gtn:GTNG_2146 component I of heptaprenyl diphosphate synthase YP_002950128.1 tryptophan RNA-binding attenuator protein; binds leader Trp transcript causing transcription termination YP_002950129.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer YP_002950130.1 PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: gtn:GTNG_2149 DNA binding protein HU YP_002950131.1 TIGRFAM: stage IV sporulation protein A; KEGG: gka:GK2217 stage IV sporulation protein A (spore cortex formation and coat assembly) YP_002950132.1 KEGG: gtn:GTNG_2151 hypothetical protein YP_002950133.1 KEGG: gtn:GTNG_2152 hypothetical protein YP_002950134.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate YP_002950135.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains YP_002950136.1 KEGG: gtn:GTNG_2155 hypothetical protein YP_002950137.1 KEGG: gtn:GTNG_2156 hypothetical protein YP_002950138.1 KEGG: gtn:GTNG_2157 hypothetical protein YP_002950139.1 KEGG: bcy:Bcer98_1223 hypothetical protein YP_002950140.1 KEGG: bcy:Bcer98_3657 hypothetical protein YP_002950141.1 TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: bcz:pE33L466_0138 spore germination protein KC YP_002950142.1 TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: bcz:pE33L466_0136 spore germination protein YP_002950143.1 PFAM: GerA spore germination protein; KEGG: bcz:pE33L466_0139 spore germination protein KA YP_002950144.1 catalyzes the isomerization of isopentenyl pyrophosphate to dimethylallyl diphosphate YP_002950145.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins YP_002950146.1 KEGG: gtn:GTNG_2162 L-acyl-sn-glycerol-3-phosphate acetyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_002950147.1 Catalyzes the formation of (d)CDP from ATP and (d)CMP YP_002950148.1 KEGG: gka:GK2228 hypothetical protein YP_002950149.1 PFAM: type IV pilus assembly PilZ; KEGG: gka:GK2229 hypothetical protein YP_002950150.1 TIGRFAM: germination protein YpeB; PFAM: propeptide PepSY amd peptidase M4; KEGG: gtn:GTNG_2166 hypothetical protein YP_002950151.1 TIGRFAM: spore cortex-lytic enzyme; PFAM: cell wall hydrolase SleB; peptidoglycan-binding protein; KEGG: gka:GK2231 sporulation specific N-acetylmuramoyl-L-alanine amidase (spore cortex-lytic enzyme) YP_002950152.1 KEGG: gka:GK2232 hypothetical protein YP_002950153.1 KEGG: afl:Aflv_2013 transposase; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB YP_002950154.1 PFAM: transposase IS200-family protein; KEGG: amt:Amet_3817 transposase IS200-family protein YP_002950155.1 PFAM: transposase IS4 family protein; KEGG: gka:GK2942 hypothetical protein YP_002950156.1 PFAM: asparaginase/glutaminase; KEGG: bld:BLi02433 hypothetical protein YP_002950157.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: afl:Aflv_1069 thioredoxin reductase YP_002950158.1 PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: gka:GK2235 NAD-specific glutamate dehydrogenase (NAD-GDH) YP_002950159.1 enables recognition and targeting of proteins for proteolysis, involved in negative regulation of competence YP_002950160.1 PFAM: metallophosphoesterase; KEGG: afl:Aflv_1064 calcineurin-like phosphohydrolase YP_002950161.1 KEGG: gka:GK2237 hypothetical protein YP_002950162.1 KEGG: gtn:GTNG_2175 CotJA protein YP_002950163.1 KEGG: gtn:GTNG_2176 CotJB protein YP_002950164.1 PFAM: manganese containing catalase; KEGG: gka:GK2239 spore coat peptide assembly protein YP_002950165.1 KEGG: gtn:GTNG_2178 hypothetical protein YP_002950166.1 PFAM: peptidoglycan-binding LysM; SMART: peptidoglycan-binding LysM; KEGG: afl:Aflv_1061 LysM repeat protein YP_002950167.1 PFAM: hypothetical protein; KEGG: gtn:GTNG_2180 CAAX amino terminal protease family YP_002950168.1 KEGG: gtn:GTNG_2181 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: DEAD/DEAH box helicase; helicase; SMART: DEAD-like helicases ; helicase YP_002950169.1 KEGG: gtn:GTNG_2182 hypothetical protein YP_002950170.1 KEGG: gka:GK2245 ferredoxin [4Fe-4S] YP_002950171.1 PFAM: inorganic pyrophosphatase; KEGG: gka:GK2246 inorganic pyrophosphatase (pyrophosphate phospho-hydrolase) YP_002950172.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate YP_002950173.1 TIGRFAM: histidinol phosphate phosphatase HisJ family; PFAM: PHP domain protein; KEGG: gka:GK2248 histidinol phosphatase YP_002950174.1 KEGG: gka:GK2253 negative regulator of sigma-X activity YP_002950175.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; in B. subtilis has been shown to regulate cell envelope modification and may effect antibiotic resistance YP_002950176.1 KEGG: gka:GK2255 hypothetical protein YP_002950177.1 KEGG: gtn:GTNG_2189 hypothetical protein YP_002950178.1 TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: gka:GK2257 hypothetical protein YP_002950179.1 KEGG: gtn:GTNG_2191 hypothetical protein YP_002950180.1 PFAM: phosphoglycerate mutase; KEGG: gtn:GTNG_2192 alpha-ribazole-5'-phosphate phosphatase YP_002950181.1 PFAM: cobalamin-5-phosphate synthase CobS; KEGG: gka:GK2260 cobalamin-5-phosphate synthase YP_002950182.1 PFAM: cobalbumin biosynthesis protein; KEGG: gtn:GTNG_2194 cobinamide kinase, cobinamide phosphateguanylyltransferase YP_002950183.1 TIGRFAM: L-threonine-O-3-phosphate decarboxylase; PFAM: aminotransferase class I and II; KEGG: gtn:GTNG_2195 aminotransferase YP_002950184.1 CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group YP_002950185.1 PFAM: protein of unknown function DUF105; ABC transporter related; SMART: ATPase AAA; KEGG: gka:GK2264 ferric ion ABC transporter (permease) YP_002950186.1 PFAM: transporter permease; KEGG: gka:GK2265 ferric ion ABC transporter (permease) YP_002950187.1 PFAM: periplasmic binding protein; KEGG: gka:GK2266 ferric ion ABC transporter (ferric ion-binding protein) YP_002950188.1 PFAM: protein of unknown function DUF1696; KEGG: gtn:GTNG_2200 hypothetical protein YP_002950189.1 KEGG: bpu:BPUM_0587 hypothetical protein YP_002950190.1 PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: gtn:GTNG_2203 transcriptional regulator GntR family YP_002950191.1 TIGRFAM: glucosamine-6-phosphate isomerase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: gka:GK2276 N-acetylglucosamine-6-phosphate isomerase YP_002950192.1 KEGG: gtn:GTNG_2205 N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; amidohydrolase YP_002950193.1 KEGG: gtn:GTNG_2206 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; hypothetical protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; histidine kinase HAMP region domain protein YP_002950194.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: gka:GK2279 two-component response regulator YP_002950195.1 TIGRFAM: cytochrome C biogenesis protein CcsB; PFAM: cytochrome C assembly protein; KEGG: gka:GK2280 cytochrome C biogenesis protein YP_002950196.1 PFAM: ResB family protein; KEGG: gka:GK2281 cytochrome C biogenesis protein YP_002950197.1 catalyzes the reduction of the disulfide bonds in the heme binding site of apocytochrome C YP_002950198.1 PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: gka:GK2283 ribosomal large subunit pseudouridine synthase B (pseudouridylate synthase) (uracil hydrolyase) YP_002950199.1 PFAM: nucleoside recognition protein; KEGG: gka:GK2284 spore maturation protein YP_002950200.1 PFAM: nucleoside recognition protein; KEGG: gtn:GTNG_2213 spore maturation protein A YP_002950201.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: gka:GK2286 D-alanyl-D-alanine carboxypeptidase YP_002950202.1 PFAM: manganese and iron superoxide dismutase; KEGG: gka:GK2288 superoxide dismutase YP_002950203.1 TIGRFAM: transposase, IS605 OrfB family; transposase; PFAM: transposase IS605 OrfB; KEGG: noc:Noc_2686 transposase YP_002950204.1 KEGG: afl:Aflv_1030 hypothetical protein YP_002950205.1 KEGG: afl:Aflv_1029 hypothetical protein YP_002950206.1 TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: gtn:GTNG_2218 transcriptional regulator LuxR family YP_002950207.1 functions during chromosome segregation; may form a condensin-like structure with SMC and ScpB YP_002950208.1 PFAM: protein of unknown function DUF309; KEGG: gka:GK2292 hypothetical protein YP_002950209.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gka:GK2293 hypothetical protein YP_002950210.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; subunit beta of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not YP_002950211.1 bifunctional enzyme DHBP synthase/GTP cyclohydrolase II; functions in riboflavin synthesis; converts GTP to 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine; converts ribulose 5-phopshate to 3,4-dihydroxy-2-butanone 4-phosphate YP_002950212.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine YP_002950213.1 KEGG: gtn:GTNG_2225 riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding YP_002950214.1 TIGRFAM: transposase, IS605 OrfB family; transposase; PFAM: transposase IS605 OrfB; KEGG: noc:Noc_2686 transposase YP_002950215.1 PFAM: protein of unknown function DUF1002; KEGG: gka:GK2299 hypothetical protein YP_002950216.1 TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: gtn:GTNG_2231 diaminopimelate decarboxylase YP_002950217.1 PFAM: GerA spore germination protein; KEGG: gka:GK2301 stage V sporulation protein AF YP_002950218.1 KEGG: gka:GK2302 stage V sporulation protein AE YP_002950219.1 PFAM: SpoVA protein; KEGG: gtn:GTNG_2234 sporulation protein YP_002950220.1 TIGRFAM: stage V sporulation protein AD; PFAM: stage V sporulation AD family protein; KEGG: gtn:GTNG_2235 stage V sporulation protein AD YP_002950221.1 PFAM: SpoVA protein; KEGG: gtn:GTNG_2236 stage V sporulation protein AC-like protein YP_002950222.1 KEGG: gka:GK2306 stage V sporulation protein AB YP_002950223.1 KEGG: gtn:GTNG_2238 stage V sporulation protein AA YP_002950224.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the prespore at the onset of sporulation. Interaction with spoIIAB inhibits sigma F activity throughout the cell before the formation of the asymmetric septum; after septation the interaction is confined to the mother cell, and sigma F activity is released in the prespore. YP_002950225.1 binds to sigma F preventing its association with RNA polymerase during sporulation YP_002950226.1 TIGRFAM: anti-sigma F factor antagonist; anti-anti-sigma factor; PFAM: sulfate transporter/antisigma-factor antagonist STAS; KEGG: gtn:GTNG_2241 anti-sigma F factor antagonist (stage II sporulation protein AA) YP_002950227.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: gka:GK2311 D-alanyl-D-alanine carboxypeptidase (penicilin binding protein) YP_002950228.1 TIGRFAM: pyrimidine-nucleoside phosphorylase; PFAM: glycosyl transferase family 3; Pyrimidine nucleoside phosphorylase domain; glycosyl transferase, family 3-like; KEGG: afl:Aflv_1000 pyrimidine-nucleoside phosphorylase YP_002950229.1 catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation YP_002950230.1 catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose YP_002950231.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs YP_002950232.1 KEGG: gka:GK2316 hypothetical protein YP_002950233.1 PFAM: ferric-uptake regulator; KEGG: gtn:GTNG_2248 transcriptional regulator Fur family YP_002950234.1 TIGRFAM: stage II sporulation protein M; PFAM: protein of unknown function DUF95 transmembrane; KEGG: gtn:GTNG_2249 stage II sporulation protein M YP_002950235.1 TIGRFAM: transposase, IS605 OrfB family; transposase; PFAM: transposase IS605 OrfB; KEGG: noc:Noc_2686 transposase YP_002950236.1 KEGG: gtn:GTNG_2250 hypothetical protein YP_002950237.1 PFAM: NUDIX hydrolase; KEGG: gka:GK2320 ADP-ribose pyrophosphatase YP_002950238.1 PFAM: aldo/keto reductase; KEGG: gtn:GTNG_2252 D-threo-aldose 1-dehydrogenase YP_002950239.1 KEGG: afl:Aflv_0989 hypothetical protein YP_002950240.1 KEGG: gka:GK2324 hypothetical protein YP_002950241.1 KEGG: gtn:GTNG_2255 hypothetical protein YP_002950242.1 PFAM: HesB/YadR/YfhF-family protein; KEGG: gtn:GTNG_2256 hypothetical protein YP_002950243.1 SMART: zinc finger CDGSH-type domain protein; KEGG: gtn:GTNG_2257 hypothetical protein YP_002950244.1 KEGG: gtn:GTNG_2258 hypothetical protein YP_002950245.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gka:GK2329 short chain dehydrogenase/reductase family oxidoreductase YP_002950246.1 PFAM: beta-lactamase; KEGG: gka:GK2330 hypothetical protein YP_002950247.1 catalyzes the formation of L-proline from pyrroline-5-carboxylate YP_002950248.1 TIGRFAM: transposase, IS605 OrfB family; transposase; PFAM: transposase IS605 OrfB; KEGG: noc:Noc_2686 transposase YP_002950249.1 catalyzes the reduction of alpha, beta-unsaturated aldehydes and ketones; reduces the nitro group nitroester and nitroaromatic compounds YP_002950250.1 member of metallo-beta-lactamase family; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions YP_002950251.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate YP_002950252.1 PFAM: cyclase family protein; KEGG: gtn:GTNG_2265 uncharacterized ACR, predicted metal-dependent hydrolase YP_002950253.1 catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate YP_002950254.1 KEGG: ckl:CKL_2050 hypothetical protein YP_002950255.1 KEGG: bcz:pE33L466_0269 nucleotidyltransferase YP_002950256.1 PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: afl:Aflv_0974 chemotaxis signal transduction protein YP_002950257.1 TIGRFAM: peptidase T-like protein; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: gka:GK2347 tripeptidase YP_002950258.1 PFAM: carboxyl transferase; KEGG: gka:GK2349 propionyl-CoA carboxylase YP_002950259.1 TIGRFAM: methylmalonyl-CoA epimerase; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gtn:GTNG_2293 lactoylglutathione lyase and related lyase YP_002950260.1 KEGG: gtn:GTNG_2294 hypothetical protein YP_002950261.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: gtn:GTNG_2295 protein ErfK/SrfK precursor YP_002950262.1 PFAM: protein of unknown function DUF939; KEGG: gka:GK2353 hypothetical protein YP_002950263.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bat:BAS4057 amino acid ABC transporter ATP-binding protein YP_002950264.1 TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bcy:Bcer98_2848 polar amino acid ABC transporter inner membrane subunit YP_002950265.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; KEGG: bwe:BcerKBAB4_3995 extracellular solute-binding protein YP_002950266.1 PFAM: protein of unknown function DUF1094; KEGG: gtn:GTNG_2297 hypothetical protein YP_002950267.1 functions in transport of arginine/ornithine; inner membrane ATPase that cleaves ATP and phosphorylates two periplasmic proteins that function as two distinct transporters, the AO (arginine and ornithine) and LAO (lysine, arginine, and ornithine) periplasmic binding proteins YP_002950268.1 MDM; functions in conversion of succinate to propionate YP_002950269.1 KEGG: gka:GK2371 methylmalonyl-CoA mutase small subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase YP_002950270.1 KEGG: bld:BLi04306 hypothetical protein YP_002950271.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bld:BLi04307 hypothetical protein YP_002950272.1 KEGG: bln:Blon_0434 hypothetical protein YP_002950273.1 PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; KEGG: gka:GK2376 branched-chain alpha-keto acid dehydrogenase subunit E2 YP_002950274.1 PFAM: transketolase; transketolase domain protein; KEGG: gka:GK2377 branched-chain alpha-keto acid dehydrogenase E1 component beta chain (2-oxoisovalerate dehydrogenase subunit beta) YP_002950275.1 PFAM: dehydrogenase E1 component; KEGG: gtn:GTNG_2307 2-oxoisovalerate dehydrogenase subunit alpha YP_002950276.1 E3 component of the branched-chain alpha-keto acid dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide YP_002950277.1 catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate YP_002950278.1 PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: gka:GK2381 leucine dehydrogenase YP_002950279.1 catalyzes the synthesis of butanoylphosphate from butanoyl-CoA and inorganic phosphate YP_002950280.1 KEGG: gtn:GTNG_2312 sensory box sigma-54 dependent DNA-binding response regulator; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; PAS fold-4 domain protein; PAS fold domain protein; SMART: ATPase AAA; PAS domain containing protein YP_002950281.1 KEGG: gtn:GTNG_2313 hypothetical protein YP_002950282.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: gka:GK2385 glycerophosphodiester phosphodiesterase YP_002950283.1 KEGG: afl:Aflv_0954 hypothetical protein YP_002950284.1 KEGG: gtn:GTNG_2317 stage 0 sporulation protein A; TIGRFAM: sporulation transcription factor Spo0A; PFAM: sporulation initiation factor Spo0A ; response regulator receiver; SMART: response regulator receiver YP_002950285.1 KEGG: gtn:GTNG_2318 stage IV sporulation protein B; TIGRFAM: stage IV sporulation protein B; PFAM: peptidase S55 SpoIVB; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein YP_002950286.1 TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: gtn:GTNG_2319 DNA repair and genetic recombination YP_002950287.1 regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes YP_002950288.1 KEGG: gka:GK2391 hypothetical protein; TIGRFAM: hemolysin A; PFAM: RNA-binding S4 domain protein; ribosomal RNA methyltransferase RrmJ/FtsJ; SMART: RNA-binding S4 domain protein YP_002950289.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate YP_002950290.1 PFAM: polyprenyl synthetase; KEGG: gka:GK2393 geranyltranstransferase (farnesyl-diphosphate synthase) YP_002950291.1 catalyzes the bidirectional exonucleolytic cleavage of DNA YP_002950292.1 TIGRFAM: transposase ; transposase, IS605 OrfB family; KEGG: btl:BALH_1567 IS605 family transposase YP_002950293.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides YP_002950294.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate YP_002950295.1 Regulates rRNA biosynthesis by transcriptional antitermination YP_002950296.1 PFAM: protein of unknown function DUF322; KEGG: gka:GK2398 hypothetical protein YP_002950297.1 an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism YP_002950298.1 composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism YP_002950299.1 KEGG: gtn:GTNG_2332 stage III sporulation protein AH YP_002950300.1 TIGRFAM: stage III sporulation protein AG; KEGG: gtn:GTNG_2333 stage III sporulation protein AG YP_002950301.1 TIGRFAM: stage III sporulation protein AF; KEGG: gtn:GTNG_2334 stage III sporulation protein AF YP_002950302.1 TIGRFAM: stage III sporulation protein AE; KEGG: gtn:GTNG_2335 stage III sporulation protein AE YP_002950303.1 TIGRFAM: stage III sporulation protein AD; KEGG: gka:GK2405 stage III sporulation protein AD YP_002950304.1 TIGRFAM: stage III sporulation protein AC; PFAM: stage III sporulation AC family protein; KEGG: gtn:GTNG_2337 stage III sporulation protein AC YP_002950305.1 necessary for complete engulfment of forespore YP_002950306.1 TIGRFAM: stage III sporulation protein AA; SMART: AAA ATPase; KEGG: gka:GK2408 stage III sporulation protein AA YP_002950307.1 KEGG: gka:GK2409 hypothetical protein YP_002950308.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA YP_002950309.1 PFAM: peptidase M24; creatinase; KEGG: gtn:GTNG_2342 proline dipeptidase YP_002950310.1 KEGG: gka:GK2412 hypothetical protein YP_002950311.1 PFAM: protein of unknown function DUF1385; KEGG: gtn:GTNG_2344 hypothetical protein YP_002950312.1 KEGG: gka:GK2414 hypothetical protein YP_002950313.1 PFAM: patatin; KEGG: gtn:GTNG_2346 hypothetical protein YP_002950314.1 involved in manganese homeostasis; activates the transcription of the mntABCD operon YP_002950315.1 PFAM: protein of unknown function DUF445; KEGG: bwe:BcerKBAB4_1651 hypothetical protein YP_002950316.1 PFAM: sodium:dicarboxylate symporter; KEGG: gtn:GTNG_2351 H(+)/sodium-glutamate symporter YP_002950317.1 KEGG: gka:GK2417 hypothetical protein YP_002950318.1 PFAM: biotin/lipoate A/B protein ligase; KEGG: gtn:GTNG_2358 lipoate protein ligase YP_002950319.1 PFAM: rhodanese; SMART: Rhodanese domain protein; KEGG: gka:GK2421 hypothetical protein YP_002950320.1 PFAM: ROK family protein; KEGG: gtn:GTNG_2360 xylose repressor gene YP_002950321.1 TIGRFAM: transposase, IS605 OrfB family; transposase; PFAM: transposase IS605 OrfB; KEGG: noc:Noc_2686 transposase YP_002950322.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein YP_002950323.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein YP_002950324.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein YP_002950325.1 PFAM: SNF2-related protein; helicase; type III restriction protein res subunit; SMART: DEAD-like helicases ; helicase domain protein; KEGG: gtn:GTNG_2365 helicase, SNF2/Rad54 family YP_002950326.1 KEGG: gtn:GTNG_2366 hypothetical protein YP_002950327.1 KEGG: gtn:GTNG_2367 hypothetical protein YP_002950328.1 KEGG: gtn:GTNG_2368 hypothetical protein YP_002950329.1 KEGG: gtn:GTNG_2369 ComG operon protein 6 YP_002950330.1 KEGG: gtn:GTNG_2370 hypothetical protein YP_002950331.1 KEGG: gka:GK2432 hypothetical protein YP_002950332.1 KEGG: gtn:GTNG_2372 ComG operon protein 3 YP_002950333.1 PFAM: type II secretion system protein; KEGG: gtn:GTNG_2373 ComG operon protein 2 YP_002950334.1 PFAM: type II secretion system protein E; SMART: AAA ATPase; KEGG: afl:Aflv_0904 competence protein ComGA YP_002950335.1 KEGG: afl:Aflv_0902 transcriptional regulator, ArsR family YP_002950336.1 KEGG: gtn:GTNG_2376 hypothetical protein YP_002950337.1 PFAM: protein of unknown function DUF185; KEGG: gtn:GTNG_2377 hypothetical protein YP_002950338.1 PFAM: beta-lactamase; KEGG: gtn:GTNG_2378 hydroxyacylglutathione hydrolase YP_002950339.1 KEGG: gka:GK2440 hypothetical protein YP_002950340.1 KEGG: gtn:GTNG_2380 endopeptidase I; PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A YP_002950341.1 TIGRFAM: glucokinase, ROK family; PFAM: ROK family protein; KEGG: gka:GK2442 glucokinase YP_002950342.1 PFAM: protein of unknown function DUF910; KEGG: afl:Aflv_0894 hypothetical protein YP_002950343.1 KEGG: gka:GK2445 hypothetical protein YP_002950344.1 PFAM: rhomboid family protein; KEGG: gtn:GTNG_2385 hypothetical protein YP_002950345.1 KEGG: gtn:GTNG_2387 hypothetical protein YP_002950346.1 PFAM: protein of unknown function DUF92 transmembrane; KEGG: gka:GK2448 hypothetical protein YP_002950347.1 TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: gka:GK2449 5-formyltetrahydrofolate cyclo-ligase YP_002950348.1 TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33; KEGG: gka:GK2450 50S ribosomal protein L33 YP_002950349.1 KEGG: gtn:GTNG_2391 hypothetical protein YP_002950350.1 KEGG: gka:GK2453 hypothetical protein YP_002950351.1 KEGG: afl:Aflv_0882 ABC-type phosphate transporter, ATPase component; TIGRFAM: phosphate ABC transporter ATPase; PFAM: ABC transporter related; SMART: ATPase AAA YP_002950352.1 PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: gka:GK3439 transposase YP_002950353.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: gka:GK2455 peptidoglycan biosynthesis (penicillin-binding protein 2A) YP_002950354.1 PFAM: major facilitator superfamily MFS_1; KEGG: gka:GK2456 hypothetical protein YP_002950355.1 PFAM: manganese and iron superoxide dismutase; KEGG: gtn:GTNG_2400 manganese superoxide dismutase YP_002950356.1 PFAM: protein of unknown function DUF1189; KEGG: gtn:GTNG_2401 hypothetical protein YP_002950357.1 TIGRFAM: phosphate ABC transporter inner membrane subunit PstA; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gka:GK2461 phosphate ABC transporter (permease) YP_002950358.1 TIGRFAM: phosphate ABC transporter inner membrane subunit PstC; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bcy:Bcer98_0604 phosphate ABC transporter inner membrane subunit PstC YP_002950359.1 TIGRFAM: phosphate binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: gka:GK2463 phosphate ABC transporter (phosphate-binding protein) YP_002950360.1 KEGG: gka:GK2465 hypothetical protein YP_002950361.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis YP_002950362.1 KEGG: gka:GK2467 hypothetical protein YP_002950363.1 KEGG: gtn:GTNG_2405 hypothetical protein YP_002950364.1 PFAM: ferric-uptake regulator; KEGG: afl:Aflv_0869 Zn2+ uptake regulation protein YP_002950365.1 PFAM: ABC transporter; KEGG: gtn:GTNG_2407 high-affinity zinc uptake system membrane protein ZnuB YP_002950366.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gtn:GTNG_2408 high-affinity zinc uptake system ATP-binding protein ZnuC YP_002950367.1 KEGG: gtn:GTNG_2410 hypothetical protein YP_002950368.1 Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues YP_002950369.1 PFAM: DEAD/DEAH box helicase; helicase domain protein; SMART: DEAD-like helicases ; helicase; KEGG: gtn:GTNG_2412 ATP-dependent RNA helicase, DEAD/DEAH box family YP_002950370.1 KEGG: gtn:GTNG_2413 hypothetical protein YP_002950371.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway YP_002950372.1 PFAM: protein of unknown function DUF34; KEGG: afl:Aflv_0860 hypothetical protein YP_002950373.1 PFAM: protein of unknown function DUF633; KEGG: gtn:GTNG_2416 hypothetical protein YP_002950374.1 PFAM: cytochrome C class I; KEGG: gka:GK2480 cytochrome C YP_002950375.1 KEGG: gtn:GTNG_2418 hypothetical protein YP_002950376.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; primary sigma factor of bacterium YP_002950377.1 synthesizes RNA primers at the replication forks YP_002950378.1 PFAM: protein of unknown function DUF188; KEGG: bcy:Bcer98_3021 hypothetical protein YP_002950379.1 PFAM: protein of unknown function DUF299; KEGG: gtn:GTNG_2421 hypothetical protein YP_002950380.1 PFAM: hypothetical protein; Helix-turn-helix type 11 domain protein; regulatory protein DeoR; SMART: hypothetical protein; KEGG: gtn:GTNG_2422 hypothetical protein YP_002950381.1 involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA YP_002950382.1 KEGG: gka:GK2487 hypothetical protein YP_002950383.1 TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; Miro domain protein; protein synthesis factor GTP-binding; KEGG: gka:GK2488 GTP-binding protein YP_002950384.1 TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; Cytidine and deoxycytidylate deaminase zinc-binding domain protein; KEGG: gtn:GTNG_2426 cytidine deaminase YP_002950385.1 PFAM: diacylglycerol kinase; KEGG: gtn:GTNG_2427 diacylglycerol kinase YP_002950386.1 PFAM: protein of unknown function UPF0054; KEGG: gtn:GTNG_2428 hypothetical protein YP_002950387.1 KEGG: gtn:GTNG_2429 metal-dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase 7TM extracellular region; metal-dependent phosphohydrolase 7TM intracellular region; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_002950388.1 PFAM: PhoH family protein; KEGG: gtn:GTNG_2430 phosphate starvation-induced protein YP_002950389.1 TIGRFAM: sporulation protein YqfD; PFAM: stage IV sporulation YqfD; KEGG: gka:GK2494 stage IV sporulation protein YP_002950390.1 TIGRFAM: sporulation protein YqfC; PFAM: protein of unknown function DUF1429; KEGG: gtn:GTNG_2432 hypothetical protein YP_002950391.1 KEGG: gka:GK2496 hypothetical protein YP_002950392.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA YP_002950393.1 TIGRFAM: Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; KEGG: gtn:GTNG_2434 Na+/phosphate symporter YP_002950394.1 KEGG: gka:GK2499 deoxyribose-phosphate aldolase; TIGRFAM: deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase YP_002950395.1 KEGG: gka:GK2500 hypothetical protein; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: protein of unknown function UPF0004 ; radical SAM protein; deoxyribonuclease/rho motif-related TRAM; SMART: Elongator protein 3/MiaB/NifB YP_002950396.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase YP_002950397.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype YP_002950398.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion YP_002950399.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria YP_002950400.1 PFAM: GrpE protein; KEGG: gka:GK2505 chaperone protein (heat shock protein) (HSP-70 cofactor) YP_002950401.1 negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons YP_002950402.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III YP_002950403.1 binds to the ribosome on the universally-conserved alpha-sarcin loop YP_002950404.1 KEGG: gtn:GTNG_2445 hypothetical protein YP_002950405.1 TIGRFAM: stage II sporulation protein P; PFAM: stage II sporulation P family protein; KEGG: gka:GK2510 stage II sporulation protein P (septal wall dissolution protein) YP_002950406.1 Initiates the rapid degradation of small, acid-soluble proteins during spore germination YP_002950408.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase YP_002950409.1 required for the assembly and function of the DNAX complex which is required for the assembly of the subunit beta onto primed DNA YP_002950410.1 KEGG: afl:Aflv_0824 hypothetical protein YP_002950411.1 TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; beta-lactamase; KEGG: gtn:GTNG_2451 DNA internalization-related competence protein ComEC YP_002950412.1 TIGRFAM: ComE operon protein 2; PFAM: CMP/dCMP deaminase zinc-binding; KEGG: gka:GK2516 late competence protein (DNA binding and uptake) YP_002950413.1 KEGG: gka:GK2517 late competence protein (DNA binding and uptake); TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; PFAM: helix-hairpin-helix motif; SMART: Helix-hairpin-helix DNA-binding class 1 YP_002950414.1 may be involved in regulation of competence genes YP_002950415.1 PFAM: methyltransferase type 11; MCP methyltransferase CheR-type; UbiE/COQ5 methyltransferase; methyltransferase type 12; KEGG: gka:GK2519 hypothetical protein YP_002950416.1 TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: gka:GK2520 hypothetical protein YP_002950417.1 KEGG: gtn:GTNG_2457 hypothetical protein; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_002950418.1 transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria YP_002950419.1 PFAM: protein of unknown function UPF0044; KEGG: bcy:Bcer98_3059 hypothetical protein YP_002950420.1 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate YP_002950421.1 in Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNsubunit alpha biogenesis YP_002950422.1 TIGRFAM: HAD superfamily (subfamily IIIA) phosphatase, TIGR01668; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: gtn:GTNG_2462 hypothetical protein YP_002950423.1 PFAM: sporulation inhibitor A; KEGG: gtn:GTNG_2463 hypothetical protein YP_002950424.1 catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine YP_002950425.1 TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: gka:GK2529 phosphatidylserine synthase YP_002950426.1 With Mot B forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine. YP_002950427.1 with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine YP_002950428.1 TIGRFAM: sporulation integral membrane protein YtvI; PFAM: protein of unknown function UPF0118; KEGG: gka:GK2532 hypothetical protein YP_002950429.1 PFAM: bacitracin resistance protein BacA; KEGG: bca:BCE_2732 undecaprenyl pyrophosphate phosphatase YP_002950430.1 PFAM: hypothetical protein; KEGG: gka:GK2533 hypothetical protein YP_002950431.1 PFAM: sodium:dicarboxylate symporter; KEGG: gka:GK2534 proton/sodium:glutamate symporter YP_002950432.1 PFAM: transposase IS4 family protein; KEGG: npu:Npun_BR216 hypothetical protein YP_002950433.1 sigma-28; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the mother cell after engulfment YP_002950434.1 KEGG: afl:Aflv_0762 hypothetical protein YP_002950435.1 catalyzes the formation of L-homocysteine from cystathionine YP_002950436.1 PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: gtn:GTNG_2474 O-acetylserine lyase YP_002950437.1 enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine YP_002950438.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: gtn:GTNG_2476 S-adenosylmethionine(SAM)-dependent methyltransferase YP_002950439.1 KEGG: gtn:GTNG_2477 hypothetical protein YP_002950440.1 PFAM: protein of unknown function DUF1510; KEGG: gtn:GTNG_2478 hypothetical protein YP_002950441.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: gka:GK2546 hypothetical protein YP_002950442.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus YP_002950443.1 functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor YP_002950444.1 PFAM: peptidase U32; KEGG: gtn:GTNG_2482 peptidase, U32 family YP_002950445.1 PFAM: peptidase U32; KEGG: gtn:GTNG_2483 protease YP_002950446.1 PFAM: O-methyltransferase family 3; methyltransferase; protein-L-isoaspartate(D-aspartate) O-methyltransferase; KEGG: afl:Aflv_0749 O-methyltransferase family enzyme YP_002950447.1 PFAM: aminodeoxychorismate lyase; KEGG: gtn:GTNG_2485 hypothetical protein YP_002950448.1 PFAM: protein of unknown function DUF1292; KEGG: gka:GK2553 hypothetical protein YP_002950449.1 PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; KEGG: gtn:GTNG_2487 hypothetical protein YP_002950450.1 PFAM: protein of unknown function DUF965; KEGG: gtn:GTNG_2488 hypothetical protein YP_002950451.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_002950452.1 PFAM: protein of unknown function UPF0118; KEGG: gtn:GTNG_2491 hypothetical protein YP_002950453.1 KEGG: bli:BL05285 hypothetical protein YP_002950454.1 KEGG: gtn:GTNG_2492 hypothetical protein YP_002950455.1 PFAM: PRC-barrel domain protein; KEGG: gtn:GTNG_2493 hypothetical protein YP_002950456.1 TIGRFAM: helicase, RecD/TraA family; KEGG: gtn:GTNG_2494 exodeoxyribonuclease V alpha chain YP_002950457.1 PFAM: hypothetical protein; TPR repeat-containing protein; Sel1 domain protein repeat-containing protein; SMART: hypothetical protein; Sel1 domain protein repeat-containing protein; KEGG: afl:Aflv_0739 TPR -repeat containing protein YP_002950458.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs YP_002950459.1 PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: gtn:GTNG_2497 aminotransferase, class V YP_002950460.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: gka:GK2565 hypothetical protein YP_002950461.1 PFAM: protein of unknown function DUF161; KEGG: bha:BH1258 hypothetical protein YP_002950462.1 PFAM: ATPase AAA; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: gtn:GTNG_2500 recombination factor protein RarA YP_002950463.1 PFAM: regulatory protein TetR; KEGG: gka:GK2568 TetR/AcrR family transcriptional regulator YP_002950464.1 PFAM: acriflavin resistance protein; KEGG: afl:Aflv_0733 cation/multidrug efflux pump YP_002950465.1 TIGRFAM: transcription factor, RsfA family; KEGG: gka:GK2570 transcriptional activator YP_002950466.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: gtn:GTNG_2502 molybdopterin biosynthesis MoeB-like protein YP_002950467.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes YP_002950468.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG YP_002950469.1 KEGG: afl:Aflv_0728 hypothetical protein YP_002950470.1 TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase; KEGG: gka:GK2577 D-tyrosyl-tRNA deacylase YP_002950471.1 KEGG: gka:GK2578 GTP pyrophosphokinase (ppGpp synthetase); TIGRFAM: RelA/SpoT family protein; PFAM: RelA/SpoT domain protein; TGS domain protein; amino acid-binding ACT domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_002950472.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis YP_002950473.1 TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: gtn:GTNG_2511 single-strand DNA-specific exonuclease YP_002950474.1 part of the preprotein secretory system; forms a complex with protein YajC; SecDFyajC stimulates the proton motive force-driven protein translocation, seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF YP_002950475.1 KEGG: gtn:GTNG_2514 hypothetical protein YP_002950476.1 TIGRFAM: stage V sporulation protein B; PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; multi antimicrobial extrusion protein MatE; KEGG: gtn:GTNG_2515 stage V sporulation protein B YP_002950477.1 KEGG: gtn:GTNG_2516 hypothetical protein YP_002950478.1 member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex YP_002950479.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr) YP_002950480.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step YP_002950481.1 KEGG: gtn:GTNG_2520 hypothetical protein YP_002950482.1 KEGG: afl:Aflv_0712 Holliday junction resolvasome, helicase subunit RuvB; TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: AAA ATPase central domain protein; Holliday junction DNA helicase RuvB domain; Chromosomal replication initiator DnaA; magnesium chelatase ChlI subunit; ATPase AAA; SMART: ATPase AAA YP_002950483.1 plays an essential role in ATP-dependent branch migration of the Holliday junction YP_002950484.1 PFAM: Domain of unkown function DUF1901; Bypass-of-forespore C; KEGG: gtn:GTNG_2523 bypass-of-forespore protein C YP_002950485.1 PFAM: protein of unknown function DUF28; KEGG: gka:GK2594 hypothetical protein YP_002950486.1 KEGG: gtn:GTNG_2525 hypothetical protein YP_002950487.1 TIGRFAM: NAD+ synthetase; PFAM: NAD synthase; ExsB family protein; KEGG: afl:Aflv_0707 NH3-dependent NAD+ synthetase YP_002950488.1 PFAM: aminoglycoside phosphotransferase; KEGG: gka:GK2597 hypothetical protein YP_002950489.1 KEGG: gka:GK2598 hypothetical protein; TIGRFAM: spore coat assembly protein SafA; PFAM: peptidoglycan-binding LysM; SMART: peptidoglycan-binding LysM YP_002950490.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate YP_002950491.1 catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide YP_002950492.1 catalyzes the formation of oxaloacetate from L-aspartate YP_002950493.1 catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis YP_002950494.1 PFAM: 3H domain protein; Helix-turn-helix type 11 domain protein; KEGG: gka:GK2603 hypothetical protein YP_002950495.1 PFAM: NUDIX hydrolase; KEGG: bcy:Bcer98_2852 NUDIX hydrolase YP_002950496.1 catalyzes the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis YP_002950497.1 PFAM: amino acid-binding ACT domain protein; KEGG: gka:GK2605 hypothetical protein YP_002950498.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication YP_002950499.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; transposase IS891/IS1136/IS1341 family; KEGG: gka:GK2338 transposase YP_002950500.1 KEGG: gtn:GTNG_2537 sporulation initiation phosphotransferase B YP_002950501.1 involved in the peptidyltransferase reaction during translation YP_002950502.1 PFAM: protein of unknown function DUF464; KEGG: gtn:GTNG_2539 hypothetical ribosome-associated protein YP_002950503.1 TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21; KEGG: gtn:GTNG_2540 50S ribosomal protein L21 YP_002950504.1 PFAM: peptidase M50; KEGG: gtn:GTNG_2541 stage IV sporulation protein FB YP_002950505.1 PFAM: peptidase M23; KEGG: gtn:GTNG_2542 stage IV sporulation protein FA YP_002950506.1 TIGRFAM: septum site-determining protein MinD; PFAM: cobyrinic acid ac-diamide synthase; KEGG: gka:GK2613 ATPase involved in chromosome partitioning YP_002950507.1 blocks the formation of polar Z-ring septums YP_002950508.1 TIGRFAM: rod shape-determining protein MreD; PFAM: Rod shape-determining protein MreD; KEGG: gka:GK2615 cell-shape determining protein YP_002950509.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall YP_002950510.1 functions in MreBCD complex in some organisms YP_002950511.1 Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase YP_002950512.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell YP_002950513.1 KEGG: gtn:GTNG_2550 stage II sporulation protein B YP_002950514.1 KEGG: gka:GK2621 hypothetical protein YP_002950515.1 KEGG: gtn:GTNG_2552 hypothetical protein YP_002950516.1 PFAM: fimbrial assembly family protein; KEGG: gtn:GTNG_2553 hypothetical protein YP_002950517.1 KEGG: gtn:GTNG_2554 hypothetical protein YP_002950518.1 PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV; KEGG: gka:GK2625 signal peptidase (late competence protein) YP_002950519.1 KEGG: gka:GK2626 hypothetical protein YP_002950520.1 TIGRFAM: transposase, IS605 OrfB family; KEGG: dau:Daud_1910 hypothetical protein YP_002950521.1 PFAM: type II secretion system protein; KEGG: gka:GK2627 hypothetical protein YP_002950522.1 KEGG: afl:Aflv_0625 Tfp pilus assembly protein, pilus retraction ATPase PilT; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: ATPase AAA YP_002950523.1 PFAM: type II secretion system protein E; general secretory system II protein E domain protein; KEGG: gka:GK2629 ATPase involved in pili biogenesis YP_002950524.1 KEGG: gka:GK2630 hypothetical protein YP_002950525.1 KEGG: gka:GK2631 hypothetical protein YP_002950526.1 KEGG: gka:GK2632 hypothetical protein YP_002950527.1 KEGG: gtn:GTNG_2562 hypothetical protein YP_002950528.1 KEGG: gtn:GTNG_2563 hypothetical protein YP_002950529.1 KEGG: afl:Aflv_0618 hypothetical protein YP_002950530.1 PFAM: integrase catalytic region; KEGG: gka:GK0167 transposase of IS653-like element YP_002950531.1 KEGG: gtn:GTNG_2564 hypothetical protein YP_002950532.1 PFAM: hypothetical protein; von Willebrand factor A; SMART: von Willebrand factor A; Ig domain protein group 2 domain protein; KEGG: gka:GK2636 hypothetical protein YP_002950533.1 TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: gtn:GTNG_2566 folylpolyglutamate synthase YP_002950534.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain YP_002950535.1 KEGG: gtn:GTNG_2568 hypothetical protein YP_002950536.1 TIGRFAM: spore coat protein YsxE; KEGG: gka:GK2640 hypothetical protein YP_002950537.1 KEGG: gka:GK2641 hypothetical protein; TIGRFAM: stage VI sporulation protein D; PFAM: peptidoglycan-binding LysM; SMART: peptidoglycan-binding LysM YP_002950538.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway YP_002950539.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate YP_002950540.1 PFAM: uroporphyrinogen III synthase HEM4; KEGG: gtn:GTNG_2573 uroporphyrinogen III cosynthase YP_002950541.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis YP_002950542.1 PFAM: cytochrome C assembly protein; KEGG: gka:GK2646 negative effector of the concentration of HemA YP_002950543.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins YP_002950544.1 KEGG: gtn:GTNG_2577 hypothetical protein YP_002950545.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential YP_002950546.1 KEGG: gtn:GTNG_2579 class III heat-shock ATP-dependent Lon protease; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; ATPase AAA; ATPase associated with various cellular activities AAA_5; SMART: peptidase S16; ATPase AAA YP_002950547.1 KEGG: gtn:GTNG_2580 ATP-dependent Lon protease; TIGRFAM: ATP-dependent protease LonB; PFAM: ATPase AAA; peptidase S16; ATPase associated with various cellular activities AAA_5; magnesium chelatase ChlI subunit; SMART: ATPase AAA YP_002950548.1 binds and unfolds substrates as part of the ClpXP protease YP_002950549.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer YP_002950550.1 KEGG: gtn:GTNG_2583 hypothetical protein YP_002950551.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D YP_002950552.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate YP_002950553.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis YP_002950554.1 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis YP_002950555.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis YP_002950556.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit YP_002950557.1 catalyzes the formation of 2-acetolactate from pyruvate; also known as acetolactate synthase large subunit YP_002950558.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids YP_002950559.1 TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; KEGG: gtn:GTNG_2592 hypothetical protein YP_002950560.1 hydrolyzes non-standard nucleotides such as xanthine and inosine YP_002950561.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs YP_002950562.1 KEGG: gka:GK2667 germination (cortex hydrolysis) and sporulation (stage II, multiple polar septa) YP_002950563.1 converts L-glutamate to D-glutamate, a component of peptidoglycan YP_002950564.1 PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; KEGG: gtn:GTNG_2598 germination protein GerE YP_002950565.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase YP_002950566.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol YP_002950567.1 TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; PFAM: fumarate reductase respiratory complex transmembrane subunit; KEGG: gka:GK2673 succinate dehydrogenase (cytochrome b558 subunit) YP_002950568.1 KEGG: gtn:GTNG_2603 hypothetical cytosolic protein YP_002950569.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation. YP_002950570.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision YP_002950571.1 KEGG: gka:GK2676 hypothetical protein YP_002950572.1 PFAM: iron permease FTR1; KEGG: gka:GK2677 hypothetical protein YP_002950573.1 KEGG: gka:GK2678 hypothetical protein YP_002950574.1 PFAM: glycosyl transferase family 2; KEGG: gka:GK2679 dolichyl-phosphate mannose synthase YP_002950575.1 PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; sulfatase; metalloenzyme domain protein; KEGG: gka:GK2680 hypothetical protein YP_002950576.1 KEGG: gka:GK2681 hypothetical protein YP_002950577.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: gka:GK2682 nucleotide sugar epimerase YP_002950578.1 KEGG: gka:GK2684 hypothetical protein YP_002950579.1 catalyzes the release of sulfite from alkanesulfonates YP_002950580.1 PFAM: NADPH-dependent FMN reductase; KEGG: gtn:GTNG_2607 NADH-dependent FMN reductase YP_002950581.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bce:BC2910 alkanesulfonate ABC transporter permease YP_002950582.1 KEGG: bcy:Bcer98_1999 aliphatic sulfonate ABC transporter periplasmic ligand-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein; PFAM: NMT1/THI5 like domain protein; substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3 YP_002950583.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bld:BLi00941 SsuB YP_002950584.1 TIGRFAM: thioredoxin; PFAM: thioredoxin domain; KEGG: gka:GK2685 thioredoxin (TRX) YP_002950585.1 PFAM: electron transfer flavoprotein subunit alpha ; electron transfer flavoprotein alpha/beta-subunit; KEGG: gka:GK2686 electron transfer flavoprotein subunit alpha YP_002950586.1 PFAM: electron transfer flavoprotein alpha/beta-subunit; KEGG: gtn:GTNG_2614 electron transfer flavoprotein beta subunit YP_002950587.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_002950588.1 PFAM: Tetracycline transcriptional regulator YsiA domain protein; regulatory protein TetR; KEGG: gka:GK2689 TetR/AcrR family transcriptional regulator YP_002950589.1 PFAM: AMP-dependent synthetase and ligase; KEGG: gka:GK2690 long chain acyl-CoA synthetase YP_002950590.1 KEGG: gka:GK2691 hypothetical protein YP_002950591.1 PFAM: protein of unknown function DUF350; KEGG: gka:GK2692 hypothetical protein YP_002950592.1 MutS2; MutS-II; involved in blocking homologous and homeologous recombination; has ATPase activity stimulated by recombination intermediates; inhibits DNA strand exchange YP_002950593.1 PFAM: PHP domain protein; SMART: DNA polymerase X; phosphoesterase PHP domain protein; Helix-hairpin-helix DNA-binding class 1; KEGG: gtn:GTNG_2621 hypothetical protein YP_002950594.1 PFAM: colicin V production protein; KEGG: gka:GK2695 hypothetical protein YP_002950595.1 PFAM: protein of unknown function DUF710; KEGG: afl:Aflv_0558 cell division protein ZapA (stimulator of FtsZ polymerization and Z-ring component) YP_002950596.1 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids YP_002950597.1 PFAM: ThiJ/PfpI domain protein; KEGG: gka:GK2698 hypothetical protein YP_002950598.1 PFAM: MMPL domain protein; KEGG: gka:GK2699 hypothetical protein YP_002950599.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: gtn:GTNG_2627 transcriptional regulator MarR family YP_002950600.1 KEGG: drm:Dred_3004 hypothetical protein YP_002950602.1 KEGG: bay:RBAM_009360 YhcI YP_002950603.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bay:RBAM_009350 YhcH YP_002950604.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bha:BH0382 ABC transporter ATP-binding protein YP_002950605.1 PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: bsu:BSU09060 hypothetical protein YP_002950607.1 KEGG: drm:Dred_1516 hypothetical protein YP_002950608.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily YP_002950609.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily YP_002950610.1 PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: gtn:GTNG_2634 rRNA methyltransferase YP_002950611.1 TIGRFAM: peptide methionine sulfoxide reductase; PFAM: methionine sulfoxide reductase A; KEGG: gka:GK2710 peptide methionine sulfoxide reductase YP_002950612.1 TIGRFAM: small, acid-soluble spore protein I; KEGG: gka:GK2712 small acid-soluble spore protein SspI YP_002950614.1 TIGRFAM: transposase, IS605 OrfB family; transposase; PFAM: transposase IS605 OrfB; KEGG: noc:Noc_2686 transposase YP_002950615.1 PFAM: peptidase M42 family protein; peptidase M18 aminopeptidase I; KEGG: gka:GK2713 hypothetical protein YP_002950616.1 PFAM: dUTPase; KEGG: gka:GK2714 hypothetical protein YP_002950617.1 PFAM: protein of unknown function DUF1294; KEGG: gtn:GTNG_2639 hypothetical protein YP_002950618.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit YP_002950619.1 TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35; KEGG: gka:GK2717 50S ribosomal protein L35 YP_002950620.1 TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; KEGG: gka:GK2718 translation initiation factor IF-3 YP_002950621.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr) YP_002950622.1 TIGRFAM: sporulation protein YtxC; PFAM: sporulation protein YtxC; KEGG: gtn:GTNG_2644 hypothetical protein YP_002950623.1 Primosomal protein that may act to load helicase DnaC during DNA replication YP_002950624.1 PFAM: replication initiation and membrane attachment family protein; KEGG: gtn:GTNG_2646 replication initiation and membrane attachment protein YP_002950625.1 PFAM: ATP-cone domain protein; KEGG: gtn:GTNG_2647 regulatory protein YP_002950626.1 PFAM: transposase IS4 family protein; KEGG: gka:GK3310 transposase YP_002950627.1 KEGG: gtn:GTNG_2648 hypothetical protein YP_002950628.1 Decarboxylation of S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine YP_002950629.1 NADP-dependent; catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; active during gluconeogenesis YP_002950630.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis YP_002950631.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases YP_002950632.1 has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair YP_002950633.1 KEGG: gtn:GTNG_2655 sensory box histidine kinase PhoR; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_002950634.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: afl:Aflv_0508 DNA-binding response regulator, OmpR family (REC-wHTH domains) YP_002950635.1 PFAM: MaoC domain protein dehydratase; KEGG: gka:GK2733 hypothetical protein YP_002950636.1 Catalyzes the reversible oxidation of malate to oxaloacetate YP_002950637.1 Converts isocitrate to alpha ketoglutarate YP_002950638.1 catalyzes the formation of citrate from acetyl-CoA and oxaloacetate YP_002950639.1 PFAM: protein of unknown function DUF441; KEGG: gka:GK2737 hypothetical protein YP_002950640.1 PFAM: transposase IS4 family protein; KEGG: afl:Aflv_2748 transposase, IS4 YP_002950641.1 TIGRFAM: transposase, IS605 OrfB family; transposase; PFAM: transposase IS605 OrfB; KEGG: noc:Noc_2686 transposase YP_002950642.1 TIGRFAM: sporulation integral membrane protein YtvI; PFAM: protein of unknown function UPF0118; KEGG: gka:GK2738 hypothetical protein YP_002950643.1 PFAM: FxsA cytoplasmic membrane protein; KEGG: afl:Aflv_0501 protein affecting phage T7 exclusion by the F plasmid YP_002950644.1 catalyzes the formation of phosphoenolpyruvate from pyruvate YP_002950645.1 catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis YP_002950646.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein YP_002950647.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits YP_002950648.1 KEGG: gtn:GTNG_2668 DNA polymerase III alpha subunit; TIGRFAM: DNA polymerase III subunit alpha; PFAM: DNA polymerase III subunit alpha; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: phosphoesterase PHP domain protein YP_002950649.1 KEGG: gtn:GTNG_2669 hypothetical membrane spanning protein YP_002950650.1 KEGG: gka:GK2746 hypothetical protein YP_002950651.1 PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: gtn:GTNG_2671 phosphoesterase, DHH family protein YP_002950652.1 KEGG: gka:GK2748 hypothetical protein YP_002950653.1 PFAM: DRTGG domain protein; hypothetical protein; thioesterase superfamily protein; regulatory protein GntR HTH; SMART: hypothetical protein; KEGG: gka:GK2749 hypothetical protein YP_002950654.1 catalyzes the opening and hydrolysis of the beta-lactam ring of beta-lactam antibiotics such as penicillins and cephalosporins YP_002950655.1 PFAM: peptidase M24; creatinase; KEGG: gka:GK2751 Xaa-Pro dipeptidase YP_002950656.1 TIGRFAM: alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein; shikimate/quinate 5-dehydrogenase; KEGG: gka:GK2752 alanine dehydrogenase YP_002950657.1 catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_002950658.1 KEGG: gka:GK2754 hypothetical protein YP_002950659.1 PFAM: UspA domain protein; KEGG: gtn:GTNG_2680 universal stress protein family YP_002950660.1 catalyzes the formation of arginine from (N-L-arginino)succinate YP_002950661.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming YP_002950662.1 KEGG: afl:Aflv_0481 hypothetical protein YP_002950663.1 PFAM: AMP-dependent synthetase and ligase; KEGG: gka:GK2759 acetyl-CoA synthetase (acetate-CoA ligase) YP_002950664.1 PFAM: transposase IS4 family protein; KEGG: gka:GK2942 hypothetical protein YP_002950665.1 AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA YP_002950666.1 PFAM: N-6 DNA methylase; KEGG: gka:GK2786 hypothetical protein YP_002950667.1 PFAM: redoxin; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; KEGG: gka:GK2787 thiol peroxidase (superoxide-inducible protein 8) YP_002950668.1 TIGRFAM: sporulation protein YtfJ; KEGG: gka:GK2788 hypothetical protein YP_002950669.1 KEGG: gtn:GTNG_2692 BH3196-like protein YP_002950670.1 PFAM: RDD domain containing protein; KEGG: gtn:GTNG_2693 hypothetical protein conserved BH3197-like protein YP_002950671.1 KEGG: gtn:GTNG_2694 signal peptide peptidase; TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49 YP_002950672.1 catalyzes the phosphorylation of NAD to NADP YP_002950673.1 PFAM: AMP-dependent synthetase and ligase; KEGG: gtn:GTNG_2696 acetyl-CoA synthetase YP_002950674.1 PFAM: small acid-soluble spore protein alpha/beta type; KEGG: gtn:GTNG_2697 small acid-soluble spore protein YP_002950675.1 Required for the synthesis of the thiazole moiety YP_002950676.1 PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: gka:GK2796 cysteine desulfurase YP_002950677.1 acts to negatively regulates ftsZ ring formation by modulating the frequency and position of the ftsZ ring formation YP_002950678.1 catalyzes the formation of L-histidinol from L-histidinol phosphate YP_002950679.1 PFAM: GAF domain protein; KEGG: gtn:GTNG_2702 GAF domain-containing proteins YP_002950680.1 KEGG: gtn:GTNG_2703 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein YP_002950681.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination YP_002950682.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr) YP_002950683.1 PFAM: transposase IS4 family protein; KEGG: gka:GK1010 transposase YP_002950684.1 PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Fibronectin type III domain protein; KEGG: gka:GK2805 hypothetical protein YP_002950685.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA YP_002950686.1 KEGG: gka:GK2807 acetoin utilization protein YP_002950687.1 PFAM: hypothetical protein; amino acid-binding ACT domain protein; SMART: hypothetical protein; KEGG: gtn:GTNG_2713 acetoin dehydrogenase YP_002950688.1 PFAM: histone deacetylase superfamily; KEGG: gtn:GTNG_2714 acetoin utilization protein AcuC YP_002950689.1 KEGG: gtn:GTNG_2715 catabolite control protein; TIGRFAM: catabolite control protein A; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_002950690.1 catalyzes the formation of 3-deoxy-D-aribino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate and the formation of prephenate from chorismate YP_002950691.1 KEGG: gtn:GTNG_2717 hypothetical cytosolic protein YP_002950692.1 KEGG: gtn:GTNG_2718 YtxH YP_002950693.1 PFAM: protein of unknown function DUF948; KEGG: gtn:GTNG_2719 hypothetical protein YP_002950694.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis YP_002950695.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate YP_002950696.1 PFAM: cell divisionFtsK/SpoIIIE; SMART: ATPase AAA; KEGG: afl:Aflv_0449 DNA segregation ATPase FtsK/SpoIIIE YP_002950697.1 PFAM: t-RNA-binding domain protein; KEGG: afl:Aflv_0448 EMAP domain RNA-binding protein YP_002950698.1 PFAM: protein of unknown function DUF1444; KEGG: gtn:GTNG_2723 hypothetical protein YP_002950699.1 PFAM: thioredoxin domain; KEGG: bha:BH3253 thioredoxin H1 YP_002950700.1 pyrophosphatase; has activity against dUTP and dITP; the crystal structure of the Vibrio protein showed similarity to Methanococcus janaschii Mj0226; in Vibrio cholerae this gene is part of the Mba operon that is involved in regulation and maintenance of biofilms; in Escherichia coli overexpression of this gene leads to resistance to an HMP analog YP_002950701.1 PFAM: peptidase M42 family protein; KEGG: afl:Aflv_0444 cellulase M related protein YP_002950702.1 PFAM: propeptide PepSY amd peptidase M4; KEGG: gtn:GTNG_2726 hypothetical protein YP_002950703.1 PFAM: beta-lactamase; KEGG: gtn:GTNG_2727 metal-dependent hydrolase YP_002950704.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine YP_002950705.1 KEGG: gtn:GTNG_2729 hypothetical protein YP_002950706.1 PFAM: aminoglycoside phosphotransferase; Choline/ethanolamine kinase; KEGG: afl:Aflv_0439 phosphotransferase, choline kinase family enzyme YP_002950707.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; transposase IS891/IS1136/IS1341 family; KEGG: gka:GK2338 transposase YP_002950708.1 KEGG: afl:Aflv_0437 hypothetical protein YP_002950709.1 TIGRFAM: 2'-5' RNA ligase; PFAM: phosphoesterase HXTX; KEGG: gka:GK2829 hypothetical protein YP_002950710.1 PFAM: major facilitator superfamily MFS_1; proton/sugar symporter LacY; nucleoside:H symporter; KEGG: afl:Aflv_0433 maltose permease, MFS type YP_002950711.1 TIGRFAM: dipeptidase; PFAM: peptidase M20; KEGG: afl:Aflv_0432 zinc-dependent metallopeptidase YP_002950712.1 PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: gka:GK2832 DeoR family transcriptional regulator YP_002950713.1 PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: gtn:GTNG_2737 ribosomal small subunit pseudouridine synthase A YP_002950714.1 KEGG: gka:GK2834 hypothetical protein YP_002950715.1 PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: gtn:GTNG_2738 export protein for polysaccharides and teichoicacids YP_002950716.1 PFAM: HI0933 family protein; FAD dependent oxidoreductase; glucose-inhibited division protein A; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: gtn:GTNG_2739 hypothetical protein YP_002950717.1 KEGG: gtn:GTNG_2740 YteV YP_002950718.1 PFAM: rhodanese; SMART: Rhodanese domain protein; KEGG: gtn:GTNG_2741 rhodanese-like domain protein YP_002950719.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase YP_002950720.1 PFAM: major facilitator superfamily MFS_1; KEGG: gka:GK2843 multidrug resistance protein YP_002950721.1 KEGG: gtn:GTNG_2744 hypothetical protein YP_002950722.1 KEGG: gtn:GTNG_2745 hypothetical protein YP_002950723.1 PFAM: transposase IS4 family protein; KEGG: gka:GK3310 transposase YP_002950724.1 KEGG: gtn:GTNG_2746 hypothetical protein; TIGRFAM: conserved hypothetical protein; PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB YP_002950725.1 PFAM: rRNA methylase; KEGG: afl:Aflv_0420 SAM-dependent methyltransferase YP_002950726.1 KEGG: gtn:GTNG_2748 hypothetical protein YP_002950727.1 PFAM: alpha/beta hydrolase fold; KEGG: afl:Aflv_0417 lysophospholipase, alpha-beta hydrolase superfamily YP_002950728.1 KEGG: gka:GK2848 hypothetical protein YP_002950729.1 KEGG: gka:GK0905 hypothetical protein YP_002950730.1 TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferase class-II; KEGG: gtn:GTNG_0790 asparagine synthetase, glutamine-hydrolyzing YP_002950731.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase YP_002950732.1 PFAM: transposase IS4 family protein; KEGG: npu:Npun_BR216 hypothetical protein YP_002950733.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP YP_002950734.1 KEGG: gtn:GTNG_2752 YtmB YP_002950735.1 PFAM: BAAT/acyl-CoA thioester hydrolase; KEGG: gtn:GTNG_2753 peptidase YP_002950736.1 KEGG: gtn:GTNG_2754 ABC transporter substrate-binding protein YP_002950737.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gtn:GTNG_2755 transporter YP_002950738.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gtn:GTNG_2756 ABC transporter (permease) YP_002950739.1 TIGRFAM: nucleoside triphosphatase YtkD; PFAM: NUDIX hydrolase; KEGG: gtn:GTNG_2757 MutT/NUDIX family protein YP_002950740.1 KEGG: gka:GK2859 hypothetical protein YP_002950741.1 KEGG: gka:GK2860 hypothetical protein YP_002950742.1 PFAM: ferritin; KEGG: gtn:GTNG_2760 DNA-protecting protein YP_002950743.1 catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2 YP_002950744.1 PFAM: protein of unknown function DUF37; KEGG: afl:Aflv_0398 uncharacterized conserved protein, HlyA family YP_002950745.1 PFAM: periplasmic solute binding protein; KEGG: gka:GK2865 Mn/Zn ABC transporter (Mn/Zn-binding (LipO)protein) (surface adhesin A) YP_002950746.1 KEGG: gtn:GTNG_2766 hypothetical protein YP_002950747.1 KEGG: gtn:GTNG_2767 predicted diverged CheY-domain YP_002950748.1 PFAM: protein of unknown function DUF1540; KEGG: gtn:GTNG_2768 hypothetical protein YP_002950749.1 KEGG: gtn:GTNG_2769 hypothetical protein YP_002950750.1 converts O-succinylbenzoate to O-succinylbenzoyl-CoA YP_002950751.1 catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA YP_002950752.1 PFAM: alpha/beta hydrolase fold; KEGG: gtn:GTNG_2772 menaquinone biosynthesis related protein YP_002950753.1 SEPHCHC synthase; forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1- carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis YP_002950754.1 TIGRFAM: isochorismate synthase; PFAM: chorismate binding-like; KEGG: gtn:GTNG_2774 menaquinone-specific isochorismate synthase YP_002950755.1 PFAM: transposase mutator type; KEGG: gtn:GTNG_0322 transposase (04) YP_002950756.1 catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate YP_002950757.1 TIGRFAM: sporulation protein, yteA family; PFAM: zinc finger DksA/TraR C4-type; KEGG: gtn:GTNG_2776 DnaK suppressor protein YP_002950758.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; transposase IS891/IS1136/IS1341 family; KEGG: gka:GK2338 transposase YP_002950759.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: gtn:GTNG_2783 membrane protein YP_002950760.1 KEGG: gka:GK2002 hypothetical protein YP_002950762.1 KEGG: btk:BT9727_4892 permease YP_002950763.1 PFAM: LytTr DNA-binding region; KEGG: btk:BT9727_4893 response regulator YP_002950765.1 PFAM: NAD-dependent epimerase/dehydratase; NmrA family protein; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: bld:BLi00677 YhfK YP_002950766.1 PFAM: Luciferase-like monooxygenase; KEGG: bmj:BMULJ_05868 favin-dependent monooxygenase YP_002950767.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs YP_002950768.1 PFAM: protein of unknown function UPF0074; KEGG: gka:GK1008 hypothetical protein YP_002950769.1 KEGG: afl:Aflv_1670 transposon related protein, Zn-finger domain YP_002950770.1 PFAM: integrase catalytic region; transposase-like Mu; KEGG: afl:Aflv_1669 transposase YP_002950771.1 SMART: ATPase AAA; KEGG: gka:GK0881 hypothetical protein YP_002950772.1 PFAM: transposase mutator type; KEGG: gtn:GTNG_0322 transposase (04) YP_002950773.1 PFAM: transposase IS4 family protein; KEGG: gka:GK2942 hypothetical protein YP_002950774.1 PFAM: integrase; KEGG: gka:GK2913 integrase/recombinase YP_002950775.1 KEGG: drm:Dred_2125 Ig domain-containing protein YP_002950776.1 KEGG: lsp:Bsph_1950 hypothetical protein YP_002950777.1 PFAM: portal protein SPP1; KEGG: lsp:Bsph_1947 hypothetical protein YP_002950778.1 KEGG: bcy:Bcer98_1291 hypothetical protein YP_002950779.1 KEGG: bcy:Bcer98_1290 hypothetical protein YP_002950781.1 KEGG: bcy:Bcer98_1288 hypothetical protein YP_002950782.1 KEGG: swo:Swol_1313 hypothetical protein YP_002950783.1 SMART: helix-turn-helix domain protein; KEGG: bcy:Bcer98_1286 hypothetical protein YP_002950784.1 KEGG: drm:Dred_0379 hypothetical protein YP_002950785.1 KEGG: nth:Nther_1234 hypothetical protein YP_002950789.1 KEGG: bsu:BSU21420 holin-like protein YP_002950790.1 PFAM: transposase mutator type; KEGG: gtn:GTNG_0322 transposase (04) YP_002950792.1 PFAM: integrase; integrase domain protein SAM domain protein; KEGG: gka:GK2913 integrase/recombinase YP_002950793.1 KEGG: afl:Aflv_2013 transposase; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB YP_002950794.1 PFAM: transposase IS200-family protein; KEGG: amt:Amet_3817 transposase IS200-family protein YP_002950795.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: gtn:GTNG_2864 hypothetical protein YP_002950796.1 PFAM: MgtC/SapB transporter; KEGG: gka:GK2916 hypothetical protein YP_002950797.1 PFAM: nuclease (SNase domain protein); SMART: nuclease (SNase domain protein); KEGG: gtn:GTNG_2868 DNase/RNase endonuclease YP_002950798.1 KEGG: gka:GK2919 hypothetical protein YP_002950799.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gka:GK2920 phosphinothricin N-acetyltransferase YP_002950800.1 TIGRFAM: small acid-soluble spore protein, H-type; PFAM: small acid-soluble spore H family protein; KEGG: gtn:GTNG_2874 hypothetical protein YP_002950801.1 PFAM: TrkA-N domain protein; ion transporter; KEGG: gka:GK2922 potassium channel protein YP_002950802.1 PFAM: protein of unknown function YugN-like; KEGG: gtn:GTNG_2876 IG hypothetical 16740 YP_002950803.1 KEGG: gka:GK2001 hypothetical protein YP_002950804.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family YP_002950805.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: gtn:GTNG_2878 NADH-dependent butanol dehydrogenase A YP_002950806.1 PFAM: protein of unknown function DUF378; KEGG: gka:GK2926 hypothetical protein YP_002950807.1 induced by heat shock, salt stress, oxidative stress, glucose limitation and oxygen limitation YP_002950808.1 PFAM: aminotransferase class I and II; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: gtn:GTNG_2881 hypothetical protein YP_002950809.1 PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: afl:Aflv_2391 transcriptional regulator (Lrp/AsnC family) YP_002950811.1 PFAM: aminotransferase class I and II; KEGG: gtn:GTNG_2883 aminotransferase YP_002950812.1 PFAM: superoxide dismutase copper/zinc binding; KEGG: gka:GK2932 superoxide dismutase (Cu/Zn) YP_002950813.1 KEGG: afl:Aflv_2393 hypothetical protein YP_002950814.1 TIGRFAM: transposase, IS605 OrfB family; transposase; PFAM: transposase IS605 OrfB; KEGG: noc:Noc_2686 transposase YP_002950815.1 TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; KEGG: afl:Aflv_1946 multisubunit Na+/H+ antiporter, G subunit YP_002950816.1 PFAM: multiple resistance and pH regulation protein F; KEGG: gtn:GTNG_2888 probable efflux system for Na+ and cholate YP_002950817.1 subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali YP_002950818.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: gtn:GTNG_2890 Na+/H+ antiporter YP_002950819.1 subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali YP_002950820.1 subunit B of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in the case of S. meliloti it was proved to be involved specifically with K+ transport YP_002950821.1 subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali YP_002950822.1 PFAM: BioY protein; KEGG: afl:Aflv_2398 hypothetical protein YP_002950823.1 PFAM: phosphate transporter; KEGG: gtn:GTNG_2897 phosphate transporter family protein YP_002950824.1 PFAM: protein of unknown function DUF47; KEGG: gtn:GTNG_2898 Pit accessory protein YP_002950825.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides YP_002950826.1 PFAM: periplasmic binding protein; KEGG: gtn:GTNG_2900 ABC transporter substrate-binding protein YP_002950827.1 PFAM: 3D domain protein; KEGG: gtn:GTNG_2901 hypothetical membrane associated protein YP_002950828.1 KEGG: gtn:GTNG_2902 hypothetical protein YP_002950829.1 KEGG: gka:GK2951 hypothetical protein YP_002950830.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gka:GK2953 NADH dehydrogenase YP_002950831.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gtn:GTNG_2905 thioredoxin reductase-like protein YP_002950832.1 PFAM: transposase mutator type; KEGG: gtn:GTNG_0322 transposase (04) YP_002950833.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: gka:GK2956 hypothetical protein YP_002950834.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate YP_002950835.1 PFAM: protein of unknown function DUF1450; KEGG: gtn:GTNG_2908 hypothetical protein YP_002950836.1 PFAM: transposase IS4 family protein; KEGG: npu:Npun_BR216 hypothetical protein YP_002950837.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gtn:GTNG_2909 pyridine nucleotide-disulphide oxidoreductase YP_002950838.1 PFAM: conserved hypothetical protein; KEGG: gtn:GTNG_2910 hypothetical protein YP_002950839.1 PFAM: nitrogen-fixing NifU domain protein; KEGG: gtn:GTNG_2911 nitrogen fixation protein NifU YP_002950840.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate YP_002950841.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine YP_002950842.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine YP_002950843.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: gka:GK2965 2-hydroxyacid dehydrogenase YP_002950844.1 TIGRFAM: spore coat protein YutH; KEGG: gka:GK2966 hypothetical protein YP_002950845.1 PFAM: phosphatidylglycerophosphatase A; KEGG: gka:GK2967 hypothetical protein YP_002950846.1 TIGRFAM: HAD-superfamily subfamily IIA hydrolase like protein; HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: gtn:GTNG_2918 4-nitrophenylphosphatase YP_002950847.1 PFAM: protein of unknown function DUF86; KEGG: gka:GK2969 hypothetical protein YP_002950848.1 KEGG: gtn:GTNG_2920 hypothetical cytosolic protein YP_002950849.1 PFAM: protein of unknown function DUF1027; KEGG: gka:GK2972 hypothetical protein YP_002950850.1 KEGG: gka:GK2973 hypothetical protein YP_002950851.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group YP_002950852.1 PFAM: peptidase M23; KEGG: gtn:GTNG_2925 cell wall endopeptidase, family M23/M37 YP_002950853.1 KEGG: afl:Aflv_2427 hypothetical protein YP_002950854.1 PFAM: sodium:neurotransmitter symporter; KEGG: afl:Aflv_2428 Na+-dependent transporters of the SNF family YP_002950855.1 TIGRFAM: sporulation protein YunB; KEGG: gka:GK2981 hypothetical protein YP_002950856.1 PFAM: Domain of unknown function DUF1805; KEGG: gtn:GTNG_2932 hypothetical protein YP_002950857.1 PFAM: metallophosphoesterase; 5'-nucleotidase domain protein; KEGG: gka:GK2983 hypothetical protein YP_002950858.1 PFAM: protein of unknown function DUF81; KEGG: gka:GK2984 hypothetical protein YP_002950859.1 PFAM: protein of unknown function DUF72; KEGG: gka:GK2985 hypothetical protein YP_002950860.1 PFAM: protein of unknown function DUF771; KEGG: gtn:GTNG_2859 hypothetical protein YP_002950861.1 KEGG: gtn:GTNG_2936 hypothetical protein YP_002950862.1 PFAM: transposase mutator type; KEGG: gtn:GTNG_0322 transposase (04) YP_002950863.1 TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: gka:GK2991 hypothetical protein YP_002950864.1 TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; KEGG: gka:GK2992 nitrogen fixation protein (NifU protein) YP_002950865.1 TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; DegT/DnrJ/EryC1/StrS aminotransferase; aminotransferase class I and II; Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: afl:Aflv_2462 cysteine desulfurase YP_002950866.1 TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: gtn:GTNG_2945 ABC transporter associated protein YP_002950867.1 KEGG: gtn:GTNG_2946 ABC transporter ATP-binding protein; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: ATPase AAA YP_002950868.1 PFAM: NLPA lipoprotein; KEGG: gka:GK2997 amino acid ABC transporter (substrate binding protein) (lipoprotein) YP_002950869.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gtn:GTNG_2950 ABC transporter (permease) YP_002950870.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gtn:GTNG_2951 ABC transporter ATP-binding protein YP_002950871.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; transposase IS891/IS1136/IS1341 family; KEGG: gka:GK2338 transposase YP_002950872.1 KEGG: gka:GK3000 hypothetical protein YP_002950873.1 KEGG: gtn:GTNG_2953 thioredoxin-like protein YP_002950874.1 PFAM: TOPRIM domain protein; SMART: Toprim sub domain protein; KEGG: gtn:GTNG_2954 DNA primase (bacterial type) and small primase-like protein YP_002950875.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor YP_002950876.1 PFAM: arsenate reductase; KEGG: gtn:GTNG_2957 arsenate reductase-like protein YP_002950877.1 PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: gka:GK3006 acetyl-CoA dehydrogenase YP_002950878.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_002950879.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: gka:GK3008 3-hydroxyacyl-CoA dehydrogenase YP_002950880.1 KEGG: gka:GK3009 hypothetical protein YP_002950881.1 PFAM: proline dehydrogenase; KEGG: gka:GK3010 proline dehydrogenase YP_002950882.1 KEGG: gtn:GTNG_2963 hypothetical protein YP_002950883.1 PFAM: Coat F domain protein; KEGG: gtn:GTNG_2964 hypothetical protein YP_002950884.1 KEGG: gka:GK3013 hypothetical protein YP_002950885.1 KEGG: gtn:GTNG_2969 hypothetical protein YP_002950886.1 PFAM: aminotransferase class-III; KEGG: gka:GK3016 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_002950887.1 TIGRFAM: dethiobiotin synthase; KEGG: gka:GK3017 dethiobiotin synthetase YP_002950888.1 PFAM: BioY protein; KEGG: gka:GK3018 biotin biosynthesis protein YP_002950890.1 PFAM: transposase IS4 family protein; KEGG: gka:GK3310 transposase YP_002950891.1 PFAM: transposase IS66; KEGG: gka:GK2663 transposase YP_002950892.1 KEGG: gka:GK3302 transposase YP_002950893.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation YP_002950894.1 KEGG: afl:Aflv_2498 exoribonuclease R; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease; PFAM: ribonuclease II; ribonuclease B OB region domain; RNA binding S1 domain protein; SMART: Cold shock protein; RNA binding S1 domain protein YP_002950895.1 KEGG: gka:GK3045 carboxylesterase YP_002950896.1 TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: afl:Aflv_2500 preprotein translocase subunit SecG YP_002950897.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis YP_002950898.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate YP_002950899.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate YP_002950900.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway YP_002950901.1 KEGG: gka:GK3058 glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase; PFAM: glyceraldehyde 3-phosphate dehydrogenase; dihydrodipicolinate reductase YP_002950902.1 PFAM: sugar-binding domain protein; KEGG: gtn:GTNG_3008 transcriptional regulator YP_002950903.1 PFAM: glutaredoxin; glutaredoxin; KEGG: gtn:GTNG_3009 glutaredoxin YP_002950904.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen YP_002950905.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates YP_002950906.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: gka:GK3063 phosphocarrier protein Chr YP_002950907.1 PFAM: protein of unknown function DUF199; KEGG: gka:GK3064 hypothetical protein YP_002950908.1 PFAM: protein of unknown function UPF0052 and CofD; KEGG: gtn:GTNG_3014 hypothetical protein YP_002950909.1 PFAM: conserved hypothetical protein; KEGG: gka:GK3066 hypothetical protein YP_002950910.1 PFAM: NUDIX hydrolase; KEGG: gtn:GTNG_3016 MutT/NUDIX family protein YP_002950911.1 TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; KEGG: gtn:GTNG_3017 thioredoxin reductase YP_002950912.1 PFAM: hypothetical protein; TPR repeat-containing protein; SMART: hypothetical protein; KEGG: gka:GK3069 hypothetical protein YP_002950913.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis YP_002950914.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase YP_002950915.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide YP_002950916.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide YP_002950917.1 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis YP_002950918.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer YP_002950919.1 short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ YP_002950920.1 May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine YP_002950922.1 KEGG: gtn:GTNG_3028 acetyltransferase YP_002950923.1 hydrolyzes pyrophosphate formed during serine-46-phosphorylated HPr dephosphorylation YP_002950924.1 PFAM: nucleoside recognition protein; KEGG: gtn:GTNG_3030 OrfX/probable integral membrane protein YP_002950925.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein YP_002950926.1 catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system YP_002950927.1 PFAM: membrane protein of unknown function; KEGG: gtn:GTNG_3033 integral membrane protein YP_002950928.1 KEGG: bsu:BSU35120 hypothetical protein YP_002950929.1 KEGG: gka:GK3084 hypothetical protein YP_002950930.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrsubunit betas scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate YP_002950931.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-subunit beta is inserted between the strands, where it probes for the presence of a lesion YP_002950932.1 KEGG: afl:Aflv_2548 hypothetical protein YP_002950933.1 SMART: PDZ/DHR/GLGF domain protein; KEGG: gka:GK3088 hypothetical protein YP_002950934.1 remodeling and anchoring of the chromosome protein; in Bacillus subtilis this protein functions in polar chromosome segregation during sporulation; binds inverted sequence motifs called ram along the chromosome; condenses DNA via RacA-RacA interactions YP_002950935.1 KEGG: gka:GK3092 carboxyl-terminal processing protease; TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; peptidoglycan-binding protein; PDZ/DHR/GLGF domain protein; SMART: peptidase S41; PDZ/DHR/GLGF domain protein YP_002950937.1 KEGG: afl:Aflv_2013 transposase; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB YP_002950938.1 PFAM: transposase IS200-family protein; KEGG: amt:Amet_3817 transposase IS200-family protein YP_002950939.1 PFAM: peptidase M23; KEGG: gka:GK3099 hypothetical protein YP_002950940.1 PFAM: protein of unknown function DUF214; KEGG: gka:GK3100 cell-division protein YP_002950941.1 KEGG: gka:GK3101 cell-division ATP-binding protein; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: ATPase AAA YP_002950942.1 PFAM: cytochrome C class I; KEGG: gka:GK3102 cytochrome c551 YP_002950943.1 PFAM: protein of unknown function DUF161; KEGG: gka:GK3103 hypothetical protein YP_002950945.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins YP_002950946.1 KEGG: afl:Aflv_2564 uncharacterized conserved protein containing internal repeats YP_002950947.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: gka:GK3109 ribosomal protein S30EA YP_002950948.1 KEGG: afl:Aflv_2567 hypothetical protein YP_002950949.1 KEGG: gka:GK3112 flagellar protein YP_002950950.1 flagellin specific chaperone YP_002950951.1 involved in flagellin assembly YP_002950952.1 possibly involved in flagella export YP_002950953.1 KEGG: drm:Dred_1823 hypothetical protein YP_002950954.1 KEGG: cbt:CLH_1304 hypothetical protein YP_002950955.1 KEGG: syn:slr0667 hypothetical protein YP_002950956.1 KEGG: syn:slr0668 hypothetical protein YP_002950957.1 KEGG: bat:BAS2924 hypothetical protein YP_002950958.1 PFAM: flagellin; KEGG: gtn:GTNG_3056 flagellin protein FliB(S) YP_002950959.1 KEGG: afl:Aflv_2579 hypothetical protein YP_002950960.1 affects carbohydrate metabolism; has regulatory role in many processes YP_002950961.1 binds to flagellin and appears to stabilize flagellin during flagella assembly YP_002950962.1 KEGG: gka:GK3135 hypothetical protein YP_002950963.1 with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook YP_002950964.1 with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook YP_002950965.1 PFAM: FlgN family protein; KEGG: gtn:GTNG_3063 flagellar protein YP_002950966.1 PFAM: anti-sigma-28 factor FlgM family protein; KEGG: gtn:GTNG_3064 anti-sigma factor repressor of sigma-D-dependent transcription YP_002950967.1 KEGG: gtn:GTNG_3065 flagellar protein YP_002950968.1 PFAM: protein of unknown function DUF327; KEGG: gtn:GTNG_3066 hypothetical protein YP_002950969.1 PFAM: flagellin; KEGG: drm:Dred_2429 flagellin domain-containing protein YP_002950970.1 TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS; KEGG: gka:GK3143 flagellar biosynthesis YP_002950971.1 KEGG: gka:GK3144 flagellar biosynthesis YP_002950972.1 KEGG: gka:GK3145 hypothetical protein YP_002950973.1 KEGG: gka:GK3146 late competence protein YP_002950974.1 PFAM: helicase; type III restriction protein res subunit; SMART: DEAD-like helicases ; helicase domain protein; KEGG: gtn:GTNG_3072 ComF operon protein 1 YP_002950975.1 TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: gtn:GTNG_3074 DegV family protein YP_002950976.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: gtn:GTNG_3075 two-component response regulator YP_002950977.1 PFAM: Sensor DegS domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein; KEGG: gka:GK3151 two-component sensor histidine kinase (degradative enzyme regulator / competence regulator) YP_002950978.1 PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: gtn:GTNG_3077 hypothetical protein YP_002950979.1 TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: gtn:GTNG_3078 transcriptional regulator YP_002950980.1 PFAM: glycosyl transferase family 4; KEGG: gtn:GTNG_3079 glycosyl transferase group 4 family protein YP_002950981.1 KEGG: gtn:GTNG_3080 hypothetical protein YP_002950982.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; in some organisms, especially gram positive pathogens, have paralogs that have been found to be nonessential but do function in secretion of a subset of exported proteins YP_002950983.1 PFAM: glycosyl transferase family 2; KEGG: gtn:GTNG_3082 glycosyltransferase involved in cell wall biogenesis YP_002950984.1 KEGG: gtn:GTNG_3083 hypothetical protein YP_002950985.1 KEGG: gtn:GTNG_3084 hypothetical protein YP_002950986.1 KEGG: gtn:GTNG_3085 hypothetical protein YP_002950987.1 KEGG: gka:GK3302 transposase YP_002950988.1 PFAM: polysaccharide deacetylase; KEGG: gtn:GTNG_3086 hypothetical protein YP_002950989.1 KEGG: gtn:GTNG_3087 hypothetical protein YP_002950990.1 TIGRFAM: efflux transporter RND family, MFP subunit; KEGG: gtn:GTNG_3088 efflux transporter RND family MFP subunit YP_002950992.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; transposase IS891/IS1136/IS1341 family; KEGG: gka:GK2338 transposase YP_002950993.1 PFAM: PemK family protein; KEGG: afl:Aflv_0167 toxin-antitoxin addiction module toxin component MazF (an endoRNAse) YP_002950994.1 TIGRFAM: AbrB family transcriptional regulator; PFAM: SpoVT/AbrB domain protein; KEGG: afl:Aflv_0166 toxin-antiotoxin addiction module antitoxin component MazE YP_002950995.1 KEGG: sml:Smlt1324 hypothetical protein YP_002950996.1 KEGG: rpe:RPE_2464 hypothetical protein YP_002950997.1 KEGG: gka:GK3183 hypothetical protein YP_002950998.1 KEGG: gka:GK3184 hypothetical protein YP_002950999.1 KEGG: gka:GK3185 hypothetical protein YP_002951001.1 PFAM: transposase IS4 family protein; KEGG: drm:Dred_2628 transposase, IS4 family protein YP_002951002.1 KEGG: pab:PAB0377 stage II sporulation protein M related YP_002951003.1 KEGG: rci:RCIX1525 hypothetical protein YP_002951004.1 PFAM: peptidase M48 Ste24p; peptidase M56 BlaR1; KEGG: lsp:Bsph_2691 hypothetical protein YP_002951005.1 KEGG: dsy:DSY0814 hypothetical protein YP_002951006.1 PFAM: protein of unknown function DUF1568; KEGG: gka:GK3287 hypothetical protein YP_002951007.1 KEGG: gka:GK3288 hypothetical protein; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; SMART: AAA ATPase YP_002951008.1 PFAM: transposase IS4 family protein; KEGG: npu:Npun_BR216 hypothetical protein YP_002951009.1 KEGG: conserved hypothetical protein YP_002951010.1 PFAM: peptidase domain protein; KEGG: esi:Exig_2757 hypothetical protein YP_002951012.1 KEGG: amt:Amet_4688 hypothetical protein YP_002951013.1 PFAM: NERD domain protein; KEGG: nth:Nther_0849 NERD domain protein YP_002951014.1 KEGG: tde:TDE1803 hypothetical protein YP_002951015.1 KEGG: ctc:CTC00500 hypothetical protein YP_002951016.1 KEGG: rec:RHECIAT_PC0000832 hemolysin-type calcium binding protein YP_002951020.1 KEGG: bwe:BcerKBAB4_1173 hypothetical protein YP_002951021.1 KEGG: csc:Csac_2646 plasmid stabilization system protein YP_002951024.1 PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: gtn:GTNG_2048 transposase YP_002951026.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: stl:stu0916 transcriptional regulator YP_002951028.1 PFAM: integrase; integrase domain protein SAM domain protein; KEGG: drm:Dred_0924 phage integrase YP_002951029.1 KEGG: gka:GK0175 transposase YP_002951030.1 PFAM: protein of unknown function DUF1568; KEGG: gka:GK3287 hypothetical protein YP_002951031.1 KEGG: gka:GK3288 hypothetical protein; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; SMART: AAA ATPase YP_002951033.1 PFAM: integrase; integrase domain protein SAM domain protein; KEGG: sth:STH1821 recombinase YP_002951035.1 KEGG: lsp:Bsph_4746 hypothetical protein YP_002951036.1 TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; KEGG: pth:PTH_2457 DNA repair protein YP_002951037.1 PFAM: S-layer domain protein; Ig domain protein group 2 domain protein; KEGG: gtn:GTNG_3091 SbsB YP_002951038.1 PFAM: O-antigen polymerase; KEGG: gtn:GTNG_3092 membrane protein of ExoQ family (involved in exopolysaccharide production) YP_002951039.1 PFAM: glycosyl transferase group 1; KEGG: gtn:GTNG_3093 glycosyl transferase group 1 family protein YP_002951040.1 KEGG: gtn:GTNG_3094 teichoic acid biosynthesis proteins; TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF YP_002951041.1 TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase ; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: gtn:GTNG_3095 UDP-N-acetyl-D-mannosamine dehydrogenase YP_002951042.1 PFAM: polysaccharide pyruvyl transferase; KEGG: gtn:GTNG_3096 pyruvyl-transferase YP_002951043.1 PFAM: glycosyl transferase group 1; KEGG: gtn:GTNG_3097 predicted glycosyltransferase YP_002951044.1 TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; polysaccharide biosynthesis protein; KEGG: gtn:GTNG_3098 virulence factor MviN YP_002951045.1 PFAM: S-layer domain protein; mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2; KEGG: gtn:GTNG_3099 S-layer protein / peptidoglycanendo-beta-N-acetylglucosaminidase YP_002951046.1 PFAM: NLP/P60 protein; S-layer domain protein; KEGG: afl:Aflv_2635 cell wall-associated hydrolase containing three SLH domains YP_002951047.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; peptidase domain protein; KEGG: afl:Aflv_2637 secreted subtilisin-like serine protease YP_002951048.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; S-layer domain protein; proteinase inhibitor I9 subtilisin propeptide; KEGG: gtn:GTNG_3101 alkaline serine proteinase YP_002951049.1 KEGG: gtn:GTNG_3102 surface-layer N-acetylmuramoyl-L-alanine amidase, pXO2-42; PFAM: cell wall hydrolase/autolysin; SH3 type 3 domain protein; S-layer domain protein; protein of unknown function DUF1058; SMART: cell wall hydrolase/autolysin; SH3 domain protein YP_002951050.1 PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: gtn:GTNG_2048 transposase YP_002951051.1 KEGG: gka:GK1015 hypothetical protein YP_002951052.1 PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: gka:GK2025 transposase YP_002951053.1 KEGG: afl:Aflv_1644 transposase YP_002951054.1 KEGG: gka:GK0167 transposase of IS653-like element YP_002951055.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: gka:GK3301 transposase YP_002951056.1 KEGG: gtn:GTNG_3103 hypothetical protein YP_002951057.1 KEGG: gtn:GTNG_3104 UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase YP_002951058.1 PFAM: NLP/P60 protein; peptidoglycan-binding domain 1 protein; KEGG: gka:GK3188 cell wall lytic activity YP_002951059.1 KEGG: gtn:GTNG_3107 hypothetical protein YP_002951060.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: gtn:GTNG_3108 prophage LambdaBa04, DNA-binding protein YP_002951061.1 TIGRFAM: transposase, IS605 OrfB family; transposase; PFAM: transposase IS605 OrfB; KEGG: noc:Noc_2686 transposase YP_002951062.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: gka:GK3191 single-strand DNA-binding protein YP_002951063.1 KEGG: gka:GK3192 hypothetical protein YP_002951064.1 TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B; KEGG: gka:GK3193 hypothetical protein YP_002951065.1 KEGG: gtn:GTNG_3113 hypothetical protein YP_002951066.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; lysine and threonine sensitive YP_002951067.1 PFAM: protein of unknown function DUF1284; KEGG: gka:GK3196 iron-sulfur binding protein YP_002951068.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; transposase IS891/IS1136/IS1341 family; KEGG: gka:GK1816 transposase YP_002951069.1 KEGG: gtn:GTNG_3116 hypothetical protein YP_002951070.1 PFAM: aldehyde dehydrogenase; KEGG: gka:GK3198 NAD-dependent aldehyde dehydrogenase YP_002951071.1 PFAM: protein of unknown function DUF779; KEGG: gka:GK3199 hypothetical protein YP_002951072.1 TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: gka:GK3201 multidrug-efflux transporter YP_002951073.1 PFAM: regulatory protein TetR; KEGG: gka:GK3202 TetR/AcrR family transcriptional regulator YP_002951074.1 KEGG: gtn:GTNG_3121 TnpR resolvase YP_002951075.1 KEGG: gtn:GTNG_0325 hypothetical protein YP_002951077.1 PFAM: ROK family protein; KEGG: gka:GK3204 fructokinase YP_002951078.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gtn:GTNG_3124 ABC transporter (permease) YP_002951079.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gka:GK3206 ABC transporter (permease) YP_002951080.1 PFAM: extracellular solute-binding protein family 1; KEGG: gka:GK3207 ABC transporter (substrate-binding protein) YP_002951081.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: gka:GK3208 two-component response regulator YP_002951082.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: gka:GK3210 sugar ABC transporter (sugar-binding protein) YP_002951083.1 PFAM: FAD linked oxidase; KEGG: gka:GK3215 D-lactate dehydrogenase YP_002951084.1 PFAM: transketolase; transketolase domain protein; KEGG: gka:GK3216 pyruvate dehydrogenase E1 (lipoamide) subunit beta YP_002951085.1 KEGG: gtn:GTNG_3138 pyruvate dehydrogenase E1 (lipoamide) subunit alpha; TIGRFAM: pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha; PFAM: dehydrogenase E1 component YP_002951086.1 PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; KEGG: gka:GK3218 pyruvate dehydrogenase E2 (dihydrolipoamide acetyltransferase) YP_002951087.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gtn:GTNG_3140 glyoxylase family protein YP_002951088.1 PFAM: oxidoreductase domain protein; KEGG: gka:GK3220 hypothetical protein YP_002951089.1 KEGG: gka:GK3232 hypothetical protein YP_002951090.1 PFAM: VanZ family protein; KEGG: gka:GK3233 hypothetical protein YP_002951091.1 TIGRFAM: ribokinase; PFAM: PfkB domain protein; KEGG: gka:GK3230 ribokinase YP_002951092.1 PFAM: transposase IS4 family protein; KEGG: npu:Npun_BR216 hypothetical protein YP_002951093.1 KEGG: gtn:GTNG_3178 hypothetical protein YP_002951094.1 PFAM: protein of unknown function DUF819; KEGG: gtn:GTNG_3179 hypothetical protein YP_002951095.1 PFAM: mandelate racemase/muconate lactonizing protein; KEGG: gtn:GTNG_3181 muconate cycloisomerase YP_002951096.1 PFAM: NLP/P60 protein; KEGG: gtn:GTNG_3182 polysugar degrading enzyme (alpha-amylase) YP_002951097.1 PFAM: Na+/solute symporter; KEGG: gtn:GTNG_3183 sodium/proline symporter YP_002951098.1 KEGG: gtn:GTNG_3184 hypothetical protein YP_002951099.1 KEGG: gtn:GTNG_3185 N-acyl-L-amino acid amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_002951100.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide YP_002951101.1 KEGG: gka:GK3260 hypothetical protein YP_002951102.1 PFAM: protein of unknown function DUF1861; KEGG: gtn:GTNG_3197 hypothetical protein YP_002951103.1 PFAM: acriflavin resistance protein; KEGG: afl:Aflv_2665 cation/multidrug efflux pump YP_002951104.1 KEGG: tex:Teth514_2277 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_002951105.1 TIGRFAM: DNA binding domain protein, excisionase family; PFAM: regulatory protein MerR; KEGG: fma:FMG_0047 hypothetical protein YP_002951107.1 KEGG: bld:BLi01956 hypothetical protein YP_002951108.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: afl:Aflv_1664 lactoylglutathione lyase-like lyase YP_002951109.1 PFAM: transposase IS66; KEGG: gka:GK2663 transposase YP_002951110.1 KEGG: gka:GK3255 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; SH3 type 3 domain protein; protein of unknown function DUF1058; SMART: cell wall hydrolase/autolysin; SH3 domain protein YP_002951111.1 TIGRFAM: branched-chain amino acid transporter II carrier protein; PFAM: branched-chain amino acid transporter II carrier protein; KEGG: gtn:GTNG_3188 branched-chain amino acid transporter carrier protein YP_002951112.1 PFAM: transposase IS4 family protein; KEGG: gka:GK3310 transposase YP_002951113.1 KEGG: afl:Aflv_1670 transposon related protein, Zn-finger domain YP_002951114.1 PFAM: integrase catalytic region; transposase-like Mu; KEGG: afl:Aflv_1669 transposase YP_002951115.1 SMART: ATPase AAA; KEGG: gka:GK0881 hypothetical protein YP_002951116.1 PFAM: transposase IS4 family protein; KEGG: npu:Npun_BR216 hypothetical protein YP_002951117.1 PFAM: regulatory protein ArsR; transcriptional regulator PadR family protein; SMART: regulatory protein ArsR; KEGG: fal:FRAAL0324 ArsR family transcriptional regulator YP_002951118.1 KEGG: sco:SCO0904 secreted protein YP_002951119.1 PFAM: Appr-1-p processing domain protein; SMART: Appr-1-p processing domain protein; KEGG: gka:GK3265 hypothetical protein YP_002951121.1 PFAM: GAF domain protein; SMART: GAF domain protein; KEGG: fno:Fnod_0011 metal dependent phosphohydrolase YP_002951122.1 KEGG: gka:GK3282 hypothetical protein YP_002951124.1 PFAM: major facilitator superfamily MFS_1; KEGG: bld:BLi01613 YxiO YP_002951125.1 PFAM: regulatory protein MerR YP_002951127.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: gtn:GTNG_3208 hypothetical protein YP_002951128.1 KEGG: gtn:GTNG_3251 hypothetical protein YP_002951129.1 PFAM: SEC-C motif domain protein; KEGG: gka:GK3256 hypothetical protein YP_002951130.1 PFAM: plasmid pRiA4b ORF-3 family protein; KEGG: gka:GK3257 hypothetical protein YP_002951131.1 PFAM: SEC-C motif domain protein; KEGG: gka:GK3258 hypothetical protein YP_002951132.1 PFAM: SEC-C motif domain protein; KEGG: gka:GK3259 hypothetical protein YP_002951133.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; transposase IS891/IS1136/IS1341 family; KEGG: gka:GK1816 transposase YP_002951135.1 PFAM: SEC-C motif domain protein; KEGG: gka:GK3260 hypothetical protein YP_002951136.1 PFAM: zinc finger SWIM domain protein; KEGG: gtn:GTNG_3193 hypothetical membrane associated protein YP_002951137.1 KEGG: gka:GK3262 DNA/RNA helicase; PFAM: SNF2-related protein; helicase; SMART: DEAD-like helicases ; helicase domain protein YP_002951138.1 KEGG: gka:GK3263 hypothetical protein YP_002951139.1 PFAM: protein of unknown function DUF1861; KEGG: gka:GK3264 hypothetical protein YP_002951140.1 PFAM: Appr-1-p processing domain protein; KEGG: gka:GK3265 hypothetical protein YP_002951141.1 KEGG: gka:GK3278 hypothetical protein YP_002951142.1 KEGG: gka:GK3279 hypothetical protein YP_002951143.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; peptidoglycan-binding LysM; SMART: peptidoglycan-binding LysM; KEGG: gka:GK3280 hypothetical protein YP_002951144.1 KEGG: gka:GK3281 hypothetical protein YP_002951145.1 PFAM: protein of unknown function DUF262; KEGG: gka:GK3283 hypothetical protein YP_002951146.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; transposase IS891/IS1136/IS1341 family; KEGG: gka:GK2338 transposase YP_002951147.1 KEGG: cvi:CV_0638 hypothetical protein YP_002951148.1 KEGG: cvi:CV_0639 hypothetical protein YP_002951149.1 KEGG: gka:GK3281 hypothetical protein YP_002951150.1 PFAM: PilT protein domain protein; KEGG: dau:Daud_0375 PilT domain-containing protein YP_002951151.1 TIGRFAM: AbrB family transcriptional regulator; PFAM: SpoVT/AbrB domain protein; KEGG: gka:GK2336 hypothetical protein YP_002951152.1 KEGG: gka:GK1873 hypothetical protein YP_002951153.1 KEGG: csc:Csac_0613 hypothetical protein YP_002951155.1 KEGG: mta:Moth_0671 hypothetical protein YP_002951156.1 KEGG: gtn:GTNG_3246 hypothetical protein YP_002951157.1 KEGG: gka:GK3286 hypothetical protein YP_002951158.1 KEGG: gtn:GTNG_3248 hypothetical protein YP_002951159.1 PFAM: protein of unknown function DUF1568; KEGG: gka:GK3287 hypothetical protein YP_002951160.1 KEGG: gka:GK3288 hypothetical protein; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; SMART: AAA ATPase YP_002951161.1 PFAM: protein of unknown function DUF262; protein of unknown function DUF1524 RloF; KEGG: gka:GK3294 hypothetical protein YP_002951162.1 KEGG: gka:GK3295 hypothetical protein YP_002951163.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: bwe:BcerKBAB4_3387 DegT/DnrJ/EryC1/StrS aminotransferase YP_002951164.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase; KEGG: cbt:CLH_0791 hydrolase YP_002951165.1 PFAM: protein of unknown function DUF201; KEGG: mta:Moth_0753 carbamoyl phosphate synthase large subunit YP_002951166.1 PFAM: sugar transferase; KEGG: gur:Gura_1698 undecaprenyl-phosphate galactose phosphotransferase YP_002951167.1 PFAM: glycosyl transferase group 1; KEGG: afw:Anae109_2631 glycosyl transferase group 1 YP_002951168.1 TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase ; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: esi:Exig_2569 nucleotide sugar dehydrogenase YP_002951169.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KEGG: gsu:GSU2241 capsular polysaccharide biosynthesis protein I YP_002951170.1 PFAM: glycosyl transferase group 1; KEGG: bwe:BcerKBAB4_5063 glycosyl transferase group 1 YP_002951171.1 KEGG: ank:AnaeK_4422 hypothetical protein YP_002951172.1 PFAM: glycosyl transferase group 1; KEGG: cpe:CPE0479 capsular polysaccharide biosynthesis protein YP_002951173.1 PFAM: polysaccharide biosynthesis protein; KEGG: npu:Npun_F2442 polysaccharide biosynthesis protein YP_002951174.1 PFAM: transposase IS4 family protein; KEGG: gka:GK1010 transposase YP_002951175.1 TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: nucleotidyl transferase; KEGG: gka:GK3320 UTP-glucose-1-phosphate uridylyltransferase YP_002951176.1 KEGG: afl:Aflv_2675 low complexity protein, contains internal repeats QQVlQQDVAQLQAG YP_002951177.1 PFAM: transposase IS4 family protein; KEGG: npu:Npun_BR216 hypothetical protein YP_002951178.1 attenuator function for control of operon expression YP_002951179.1 KEGG: gka:GK3325 hypothetical protein YP_002951180.1 TIGRFAM: capsular exopolysaccharide family; KEGG: gka:GK3326 capsular polysaccharide biosynthesis protein YP_002951181.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: gka:GK3327 capsular polysaccharide biosynthesis protein YP_002951182.1 KEGG: gtn:GTNG_3270 hypothetical protein YP_002951183.1 KEGG: dau:Daud_0574 hypothetical protein YP_002951184.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP YP_002951185.1 KEGG: gka:GK3330 hypothetical protein YP_002951186.1 PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: afl:Aflv_2680 flagellar hook-basal body protein YP_002951187.1 PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: gtn:GTNG_3274 flagellar basal-body rod protein YP_002951188.1 TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; cell division protein FtsA; KEGG: gtn:GTNG_3275 MreB-like protein YP_002951189.1 TIGRFAM: sporulation transcriptional regulator SpoIIID; KEGG: gtn:GTNG_3276 stage III sporulation protein D YP_002951190.1 KEGG: gka:GK3335 intracellular proteinase inhibitor (BsuPI) YP_002951191.1 PFAM: gamma-glutamyltranspeptidase; KEGG: gka:GK3338 gamma-glutamyltranspeptidase YP_002951192.1 PFAM: peptidase M23; KEGG: gtn:GTNG_3287 stage II sporulation protein Q YP_002951193.1 TIGRFAM: stage II sporulation protein D; SpoIID/LytB domain protein; PFAM: stage II sporulation D domain protein; KEGG: gka:GK3340 stage II sporulation protein D YP_002951194.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active YP_002951195.1 PFAM: protein of unknown function DUF1779; KEGG: gtn:GTNG_3290 hypothetical protein YP_002951196.1 TIGRFAM: conserved hypothetical protein; PFAM: conserved hypothetical protein; KEGG: gtn:GTNG_3291 hypothetical protein YP_002951197.1 Catalyzes the transfer of electrons from NADH to quinone YP_002951198.1 Catalyzes the transfer of electrons from NADH to quinone YP_002951199.1 Catalyzes the transfer of electrons from NADH to ubiquinone YP_002951200.1 Catalyzes the transfer of electrons from NADH to quinone YP_002951201.1 Catalyzes the transfer of electrons from NADH to quinone YP_002951202.1 Catalyzes the transfer of electrons from NADH to quinone YP_002951203.1 Catalyzes the transfer of electrons from NADH to quinone YP_002951204.1 catalyzes the transfer of electrons from NADH to ubiquinone YP_002951205.1 Catalyzes the transfer of electrons from NADH to ubiquinone YP_002951206.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen YP_002951207.1 Catalyzes the transfer of electrons from NADH to ubiquinone YP_002951208.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane YP_002951209.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit YP_002951210.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit YP_002951211.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit YP_002951212.1 Produces ATP from ADP in the presence of a proton gradient across the membrane; the subunit delta is part of the catalytic core of the ATP synthase complex YP_002951213.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel. YP_002951214.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0 YP_002951215.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0 YP_002951216.1 PFAM: ATP synthase I; KEGG: gka:GK3365 F0F1-type ATP synthase I subunit YP_002951217.1 KEGG: afl:Aflv_2710 uncharacterized small membrane protein YP_002951218.1 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate YP_002951219.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate YP_002951220.1 PFAM: conserved hypothetical protein; KEGG: afl:Aflv_2714 hypothetical protein YP_002951221.1 catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity YP_002951222.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: afl:Aflv_2716 methyl-accepting chemotaxis protein YP_002951223.1 PFAM: protein-tyrosine phosphatase, low molecular weight; SMART: protein-tyrosine phosphatase, low molecular weight; KEGG: gka:GK3373 protein-tyrosine phosphatase YP_002951224.1 PFAM: protein of unknown function DUF204; KEGG: gtn:GTNG_3319 integral membrane protein YP_002951225.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; SUA5 domain protein; KEGG: gtn:GTNG_3320 SUA5/YciO/YrdC/YwlC family protein YP_002951226.1 TIGRFAM: stage II sporulation protein R; KEGG: gka:GK3376 stage II sporulation protein R (pro-sigma-E processing factor) YP_002951227.1 TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; RNA methylase; KEGG: gka:GK3377 protoporphyrinogen oxidase YP_002951228.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2 YP_002951229.1 PFAM: transposase IS4 family protein; KEGG: npu:Npun_BR216 hypothetical protein YP_002951230.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES; KEGG: lsp:Bsph_3678 sorbitol dehydrogenase YP_002951231.1 PFAM: transposase IS4 family protein; KEGG: gka:GK3310 transposase YP_002951232.1 catalyzes the formation of thymidine 5'-phosphate from thymidine YP_002951233.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; transposase IS891/IS1136/IS1341 family; KEGG: gka:GK2338 transposase YP_002951234.1 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome YP_002951235.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes YP_002951236.1 type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese YP_002951237.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active YP_002951238.1 similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity YP_002951239.1 catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate YP_002951240.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: gtn:GTNG_3332 two-component response regulator YP_002951241.1 PFAM: transposase IS4 family protein; KEGG: gka:GK3310 transposase YP_002951242.1 KEGG: gtn:GTNG_3333 hypothetical protein YP_002951243.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer YP_002951244.1 PFAM: DNA-directed RNA polymerase subunit delta; KEGG: gka:GK3390 DNA-directed RNA polymerase subunit delta YP_002951245.1 KEGG: gka:GK3391 hypothetical protein; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein; ArgK protein YP_002951246.1 PFAM: regulatory protein TetR; KEGG: afl:Aflv_2735 transcriptional regulator, TetR/AcrR family YP_002951247.1 PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: gtn:GTNG_3338 acyl-CoA dehydrogenase (short-chain specific) YP_002951248.1 PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: afl:Aflv_2737 acyl-CoA dehydrogenase YP_002951249.1 converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA YP_002951250.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_002951251.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: gtn:GTNG_3343 iron-sulphur-binding reductase YP_002951252.1 PFAM: phospholipase D/transphosphatidylase; SMART: phospholipase D/transphosphatidylase; KEGG: gka:GK3399 cardiolipin synthetase YP_002951253.1 KEGG: gka:GK3400 hypothetical protein YP_002951254.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase YP_002951255.1 PFAM: Domain of unknown function DUF1934; KEGG: gka:GK3402 hypothetical protein YP_002951256.1 TIGRFAM: agmatinase; PFAM: arginase/agmatinase/formiminoglutamase; KEGG: afl:Aflv_2749 agmatinase YP_002951257.1 catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine YP_002951258.1 TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: gka:GK3406 penicillin-binding protein YP_002951259.1 PFAM: protein of unknown function YwhD; KEGG: gka:GK3407 hypothetical protein YP_002951260.1 PFAM: peptidase M50; KEGG: gtn:GTNG_3353 membrane metalloprotease YP_002951261.1 4-OT; member of subfamily 5; forms a dimer; the function in the Escherichia coli cell is unknown YP_002951262.1 PFAM: xanthine/uracil/vitamin C permease; KEGG: gtn:GTNG_3355 guanine-hypoxanthine permease-like protein YP_002951263.1 KEGG: gtn:GTNG_3356 hypothetical protein YP_002951264.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: gtn:GTNG_3357 dGTP triphosphohydrolase YP_002951265.1 KEGG: gka:GK3412 hypothetical protein YP_002951266.1 PFAM: protein of unknown function UPF0236; KEGG: gka:GK1720 hypothetical protein YP_002951267.1 PFAM: transposase IS4 family protein; KEGG: drm:Dred_2628 transposase, IS4 family protein YP_002951268.1 TIGRFAM: transcription factor, RsfA family; KEGG: gtn:GTNG_3359 probable transcriptional regulatory protein YP_002951269.1 PFAM: biotin/lipoate A/B protein ligase; KEGG: gka:GK3414 hypothetical protein YP_002951270.1 in Salmonella this enzyme is required for ethanolamine catabolism; has higher affinity for CoA than Pta YP_002951271.1 PFAM: chlorite dismutase; KEGG: gka:GK3416 heme peroxidase YP_002951272.1 PFAM: cell wall hydrolase SleB; KEGG: gka:GK3417 cell wall hydrolase (sporulation) YP_002951273.1 TIGRFAM: spore coat protein GerQ; KEGG: gka:GK3418 hypothetical protein YP_002951274.1 PFAM: protein of unknown function DUF423; KEGG: gka:GK3419 hypothetical protein YP_002951275.1 KEGG: bha:BH1780 hypothetical protein YP_002951276.1 KEGG: afl:Aflv_2766 hypothetical protein YP_002951277.1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine YP_002951278.1 Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_002951279.1 PFAM: glycosyl transferase family 2; KEGG: gka:GK3432 glycosyltransferase involved in cell wall biogenesis YP_002951280.1 PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: gtn:GTNG_3377 transporter MFS superfamily YP_002951281.1 KEGG: cbh:CLC_2185 hypothetical protein YP_002951282.1 PFAM: regulatory protein MarR; regulatory protein ArsR; transcriptional regulator TrmB; SMART: regulatory protein MarR; KEGG: cbl:CLK_1705 MarR family transcriptional regulator YP_002951283.1 PFAM: peptidase M20; KEGG: bcy:Bcer98_2323 peptidase M20 YP_002951284.1 TIGRFAM: PTS system, glucose subfamily, IIsubunit alpha; PFAM: sugar-specific permease EIIA 1 domain; KEGG: gtn:GTNG_3378 PTS system, glucose-specific IIA component YP_002951285.1 KEGG: gtn:GTNG_3380 hypothetical protein YP_002951286.1 KEGG: afl:Aflv_2789 L-alanine dehydrogenase; TIGRFAM: alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein; shikimate/quinate 5-dehydrogenase YP_002951287.1 catalyzes the phosphorylation of three vitamin B6 precursors, pyridoxal, pyridoxine and pyridoxamine YP_002951288.1 PFAM: transposase IS4 family protein; KEGG: gka:GK3310 transposase YP_002951289.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; transposase IS891/IS1136/IS1341 family; KEGG: gka:GK2338 transposase YP_002951290.1 TIGRFAM: sodium/proline symporter; SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: gtn:GTNG_3384 sodium/proline symporter family protein YP_002951291.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: afl:Aflv_2792 ABC-type glutamine transporter, periplasmic-binding component YP_002951292.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: gtn:GTNG_3392 rRNA methylase SpoU YP_002951293.1 PFAM: amino acid permease-associated region; KEGG: gka:GK3461 amino acid transporter YP_002951294.1 KEGG: afl:Aflv_2793 pyruvate-formate lyase; TIGRFAM: formate acetyltransferase; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical YP_002951295.1 KEGG: afl:Aflv_2794 pyruvate-formate lyase-activating enzyme; TIGRFAM: pyruvate formate-lyase activating enzyme; PFAM: radical SAM domain protein YP_002951296.1 KEGG: gtn:GTNG_3396 hypothetical protein YP_002951297.1 PFAM: FAD dependent oxidoreductase; Rieske [2Fe-2S] domain protein; KEGG: gtn:GTNG_3397 Rieske YP_002951298.1 TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose-specific IIsubunit beta; phosphotransferase system EIIC; KEGG: bcy:Bcer98_1170 PTS system, fructose subfamily, IIC subunit YP_002951299.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; hypothetical protein; M trans-acting positive regulator; regulatory protein DeoR; PRD domain protein; KEGG: bay:RBAM_024210 ManR YP_002951300.1 TIGRFAM: PTS system, fructose subfamily, IIA subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: bld:BLi02108 PTS mannose-specific enzyme IIBCA component YP_002951301.1 KEGG: gtn:GTNG_3398 mannnose-6 phosphate isomelase; TIGRFAM: mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase type I YP_002951302.1 KEGG: gtn:GTNG_3399 glycerate kinase; TIGRFAM: glycerate kinase; PFAM: glycerate kinase YP_002951303.1 PFAM: citrate transporter; gluconate transporter; KEGG: bpu:BPUM_3631 GntP family gluconate:proton (H+) symporter YP_002951304.1 PFAM: fatty acid desaturase; KEGG: gtn:GTNG_1975 fatty acid desaturase YP_002951305.1 PFAM: protein of unknown function DUF163; KEGG: gka:GK3467 hypothetical protein YP_002951306.1 KEGG: afl:Aflv_2833 uncharacterized conserved protein, contains CXXC motif YP_002951307.1 KEGG: gka:GK3469 serine protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein YP_002951308.1 PFAM: beta-lactamase; KEGG: afl:Aflv_2835 metal-dependent hydrolase of the beta-lactamase superfamily III YP_002951309.1 KEGG: gtn:GTNG_3412 hypothetical protein YP_002951310.1 PFAM: YycH family protein; KEGG: gka:GK3472 hypothetical protein YP_002951311.1 KEGG: gka:GK3473 two-component sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; hypothetical protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; histidine kinase HAMP region domain protein YP_002951312.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: gka:GK3474 two-component response regulator YP_002951313.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis YP_002951314.1 unwinds double stranded DNA YP_002951315.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk YP_002951316.1 PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; SMART: GGDEF domain containing protein; KEGG: gka:GK3478 hypothetical protein YP_002951317.1 KEGG: gtn:GTNG_3420 IG hypothetical 15508 YP_002951318.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit YP_002951319.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: gtn:GTNG_3426 single-strand DNA-binding protein, phage-related protein YP_002951320.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21 YP_002951321.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1 YP_002951322.1 PFAM: protein of unknown function DUF951; KEGG: gtn:GTNG_3431 hypothetical protein YP_002951323.1 PFAM: MscS Mechanosensitive ion channel; KEGG: gka:GK3486 hypothetical protein YP_002951324.1 TIGRFAM: sporulation protein YyaC; PFAM: protein of unknown function DUF1256; KEGG: gka:GK3487 hypothetical protein YP_002951325.1 PFAM: protein of unknown function DUF554; KEGG: gtn:GTNG_3434 hypothetical membrane spanning protein YP_002951326.1 KEGG: gtn:GTNG_3435 site-specific DNA-binding protein; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease YP_002951327.1 PFAM: cobyrinic acid ac-diamide synthase; KEGG: gtn:GTNG_3436 centromere-like function involved in forespore chromosome partition YP_002951328.1 KEGG: gtn:GTNG_3437 probable DNA binding protein; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease YP_002951329.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA YP_002951330.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs YP_002951331.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE YP_002951332.1 PFAM: single-stranded nucleic acid binding R3H domain protein; SMART: single-stranded nucleic acid binding R3H domain protein; KH domain protein; KEGG: gtn:GTNG_3441 Jag protein YP_002951333.1 involved in biogenesis of membrane proteins; Firmicutes specific proteins are shorter than other bacterial counterparts and have a signal peptide and lipid attachment site; necessary for sporulation YP_002951334.1 PFAM: transposase IS4 family protein; KEGG: gka:GK3310 transposase YP_002951335.1 protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates YP_002951336.1 in Escherichia coli transcription of this gene is enhanced by polyamines YP_002951337.1 KEGG: gka:GKP06 hypothetical protein YP_002951338.1 PFAM: YolD-like protein; KEGG: gtn:GTNG_2070 hypothetical protein YP_002951339.1 PFAM: UMUC domain protein DNA-repair protein; KEGG: gtn:GTNG_2069 DNA-damage repair protein, ImpB/MucB/SamB family YP_002951341.1 PFAM: N-6 DNA methylase; restriction modification system DNA specificity domain; KEGG: nth:Nther_0792 N-6 DNA methylase YP_002951343.1 PFAM: N-6 DNA methylase; KEGG: sas:SAS0027 putative type I restriction enzyme methylase protein YP_002951344.1 PFAM: restriction modification system DNA specificity domain; KEGG: rsd:TGRD_038 type I restriction-modification system substrate-binding subunit YP_002951345.1 PFAM: type III restriction protein res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases; KEGG: mmq:MmarC5_0639 type III restriction enzyme, res subunit YP_002951346.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: gtn:GTNG_3492 putative integrase/recombinase Xer YP_002951347.1 PFAM: transposase mutator type; KEGG: gtn:GTNG_0322 transposase (04) YP_002951348.1 PFAM: transposase IS66; KEGG: gka:GK2663 transposase YP_002951353.1 PFAM: initiator RepB protein; KEGG: gka:GKP02 replication initiator protein YP_002951354.1 PFAM: integrase family protein; KEGG: gka:GKP42 phage integrase YP_002951355.1 PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: gka:GKP41 hypothetical protein YP_002951356.1 KEGG: gka:GKP40 hypothetical protein YP_002951357.1 KEGG: drm:Dred_3084 hypothetical protein YP_002951358.1 KEGG: bwe:BcerKBAB4_5041 hypothetical protein YP_002951359.1 KEGG: gka:GKP38 hypothetical protein YP_002951360.1 PFAM: CopG domain protein DNA-binding domain protein; KEGG: gka:GKP37 hypothetical protein YP_002951361.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: gka:GKP36 chromosome partitioning protein YP_002951362.1 KEGG: gka:GKP35 hypothetical protein YP_002951364.1 KEGG: afl:Aflv_2438 hypothetical protein YP_002951365.1 KEGG: gka:GKP04 replication protein YP_002951367.1 PFAM: beta-lactamase domain protein; KEGG: gka:GKP05 late competence protein