-- dump date   	20140619_101835
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_003251183.1	binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.
YP_003251184.1	binds the polymerase to DNA and acts as a sliding clamp
YP_003251185.1	TIGRFAM: S4 domain protein YaaA; KEGG: gka:GK0003 hypothetical protein
YP_003251186.1	Required for DNA replication; binds preferentially to single-stranded, linear DNA
YP_003251187.1	negatively supercoils closed circular double-stranded DNA
YP_003251188.1	negatively supercoils closed circular double-stranded DNA
YP_003251189.1	PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: gka:GK0007 hypothetical protein
YP_003251190.1	KEGG: gka:GK0008 hypothetical protein
YP_003251191.1	catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate
YP_003251192.1	PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; beta-lactamase; Penicillin-binding protein 5 domain protein; KEGG: gka:GK0010 serine-type D-Ala-D-Ala carboxypeptidase
YP_003251193.1	with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate
YP_003251194.1	with PdxST is involved in the biosynthesis of pyridoxal 5'-phosphate; PdxT catalyzes the hydrolysis of glutamine to glutamate and ammonia; PdxS utilizes the ammonia to synthesize pyridoxal 5'-phosphate
YP_003251195.1	catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_003251196.1	PFAM: glycoside hydrolase family 18; peptidoglycan-binding lysin domain; SMART: chitinase II; peptidoglycan-binding LysM; KEGG: gka:GK0014 spore peptidoglycan hydrolase (N-acetylglucosaminidase)
YP_003251197.1	PFAM: CMP/dCMP deaminase zinc-binding; KEGG: gka:GK0016 hypothetical protein
YP_003251198.1	catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA
YP_003251199.1	PFAM: conserved hypothetical protein; KEGG: gka:GK0018 hypothetical protein
YP_003251200.1	involved in a recombinational process of DNA repair, independent of the recBC complex
YP_003251201.1	PFAM: protein of unknown function DUF2508; KEGG: gka:GK0020 hypothetical protein
YP_003251202.1	TIGRFAM: pro-sigmaK processing inhibitor BofA; PFAM: sigmaK-factor processing regulatory BofA; KEGG: gka:GK0021 inhibitor of the pro-sigma K processing machinery
YP_003251204.1	PFAM: Sigma-G inhibitor, Gin; KEGG: gka:GK0022 hypothetical protein
YP_003251205.1	PFAM: Orn/Lys/Arg decarboxylase major region; aminotransferase class I and II; Orn/Lys/Arg decarboxylase domain protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: gka:GK0023 lysine decarboxylase
YP_003251206.1	catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP)
YP_003251207.1	catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the subunit beta on the DNA
YP_003251208.1	PFAM: PSP1 domain protein; KEGG: gka:GK0026 signal peptidase II
YP_003251209.1	in Bacillus subtilis this protein is involved in the negative regulation of DNA replication initiation; interacts with DnaN and DnaA
YP_003251210.1	PFAM: methyltransferase small; KEGG: gka:GK0028 hypothetical protein
YP_003251211.1	PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: gka:GK0029 hypothetical protein
YP_003251212.1	TIGRFAM: AbrB family transcriptional regulator; PFAM: SpoVT/AbrB domain protein; KEGG: gka:GK0030 transition state regulator
YP_003251213.1	TIGRFAM: methionyl-tRNA synthetase; methionyl-tRNA synthetase subunit beta; PFAM: tRNA synthetase class I (M); t-RNA-binding domain protein; KEGG: gka:GK0031 methionyl-tRNA synthetase (methionine--tRNA ligase)
YP_003251214.1	TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: gka:GK0032 deoxyribonuclease
YP_003251215.1	PFAM: 3D domain protein; protein of unknown function DUF348; G5 domain protein; KEGG: gka:GK0033 hypothetical protein
YP_003251216.1	KEGG: gka:GK0034 hypothetical protein; TIGRFAM: primase/topoisomerase like protein; PFAM: TOPRIM domain protein; SMART: Toprim sub domain protein
YP_003251217.1	catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin
YP_003251218.1	TIGRFAM: sporulation peptidase YabG; PFAM: peptidase U57 YabG; KEGG: gka:GK0036 hypothetical protein
YP_003251219.1	PFAM: protein of unknown function DUF1021; KEGG: gka:GK0037 veg protein
YP_003251220.1	KEGG: gtn:GTNG_0038 small acid-soluble spore protein, minoralpha/beta-type SASP
YP_003251221.1	An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis
YP_003251222.1	TIGRFAM: pur operon repressor; PFAM: purine repressor ; phosphoribosyltransferase; KEGG: gka:GK0040 pur operon repressor
YP_003251223.1	TIGRFAM: endoribonuclease L-PSP; PFAM: endoribonuclease L-PSP; KEGG: gka:GK0041 translation initiation inhibitor
YP_003251224.1	stage V sporulation protein G; essential for spore formation and a negative regulator of asymmetric septation in Bacillus; involved in methicillin-resistance, biofilm formation and capsular polysaccharide synthesis in Staphylococcus
YP_003251225.1	forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis
YP_003251226.1	catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP
YP_003251227.1	the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response
YP_003251228.1	Enables the recycling of peptidyl-tRNAs produced at termination of translation
YP_003251229.1	KEGG: gka:GK0047 hypothetical protein
YP_003251230.1	KEGG: gka:GK0048 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: transcription factor CarD; helicase; DEAD/DEAH box helicase; TRCF domain protein; type III restriction protein res subunit; SMART: DEAD-like helicase ; helicase
YP_003251231.1	TIGRFAM: stage V sporulation protein T; transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: gka:GK0049 stage V sporulation protein T (transcriptional regulator)
YP_003251232.1	PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: gka:GK0050 amino acid transporter
YP_003251233.1	TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: gka:GK0051 hypothetical protein
YP_003251234.1	PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: gka:GK0052 hypothetical protein
YP_003251235.1	TIGRFAM: sporulation protein YabP; PFAM: YabP family protein; KEGG: gka:GK0053 hypothetical protein
YP_003251236.1	TIGRFAM: spore cortex biosynthesis protein YabQ; PFAM: Spore cortex biosynthesis protein, YabQ-like; KEGG: gka:GK0054 hypothetical protein
YP_003251237.1	PFAM: septum formation initiator; KEGG: gka:GK0055 cell-division initiation protein
YP_003251238.1	PFAM: RNA binding S1 domain protein; KEGG: gka:GK0056 hypothetical protein
YP_003251239.1	KEGG: gka:GK0057 stage II sporulation protein E (serine phosphatase); TIGRFAM: stage II sporulation protein E; PFAM: stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein
YP_003251240.1	KEGG: gka:GK0058 hypothetical protein
YP_003251241.1	PFAM: aminoglycoside phosphotransferase; SMART: serine/threonine protein kinase; KEGG: gka:GK0059 serine/threonine protein kinase
YP_003251242.1	TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; protein of unkown function DUF1946 PP-loop ATpase; KEGG: gka:GK0060 hypothetical protein
YP_003251243.1	KEGG: gka:GK0061 hypoxanthine-guanine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase
YP_003251244.1	KEGG: gka:GK0062 cell-division protein and general stress protein (class III heat-shock); TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; peptidase M41 FtsH extracellular; ATPase AAA central domain protein; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA
YP_003251245.1	type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP
YP_003251246.1	becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers
YP_003251247.1	TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta; KEGG: gka:GK0065 cysteine synthase(O-acetyl-L-serine sulfhydrylase)
YP_003251248.1	PFAM: chorismate binding-like; anthranilate synthase component I domain protein; KEGG: gka:GK0066 para-aminobenzoate synthase component I
YP_003251249.1	amphibolic enzyme subunit from Bacillus subtilis performs both in anthranilate and para-aminobenzoate synthesis
YP_003251250.1	catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate
YP_003251251.1	KEGG: gka:GK0069 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS
YP_003251252.1	KEGG: gka:GK0070 dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; PFAM: dihydroneopterin aldolase
YP_003251253.1	KEGG: gka:GK0071 7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase (2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK
YP_003251254.1	PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: gka:GK0072 hypothetical protein
YP_003251255.1	PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: gwc:GWCH70_2089 transposase IS116/IS110/IS902 family protein
YP_003251256.1	TIGRFAM: hypothetical protein; PFAM: dihydrouridine synthase; KEGG: gka:GK0073 nitrogen regulation transcriptional regulator
YP_003251257.1	class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1
YP_003251258.1	PFAM: Firmicute transcriptional repressor of class III stress genes; KEGG: gka:GK0075 transcriptional regulator
YP_003251259.1	PFAM: UvrB/UvrC protein; KEGG: gka:GK0076 hypothetical protein
YP_003251260.1	PFAM: ATP:guanido phosphotransferase; KEGG: gka:GK0077 ATP:guanido phosphotransferase
YP_003251261.1	PFAM: ATPase AAA; Clp ATPase-like; AAA ATPase central domain protein; UvrB/UvrC protein; Torsin; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: AAA ATPase; KEGG: gka:GK0078 ATP-dependent Clp protease ATPase
YP_003251262.1	Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents
YP_003251263.1	PFAM: PilT protein domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: nucleotide binding protein PINc; KEGG: gka:GK0080 hypothetical protein
YP_003251264.1	4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers
YP_003251265.1	catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate
YP_003251266.1	Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation
YP_003251267.1	TIGRFAM: serine O-acetyltransferase; KEGG: gka:GK0084 serine O-acetyltransferase
YP_003251268.1	catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA
YP_003251269.1	PFAM: ribonuclease III; SMART: ribonuclease III; KEGG: gka:GK0086 hypothetical protein
YP_003251270.1	TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: gka:GK0087 tRNA/rRNA methyltransferase
YP_003251271.1	PFAM: protein of unknown function DUF901; KEGG: gka:GK0088 hypothetical protein
YP_003251272.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
YP_003251273.1	in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group have the CXXC motif
YP_003251274.1	forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force
YP_003251275.1	Modulates Rho-dependent transcription termination
YP_003251276.1	binds directly to 23S ribosomal RNA
YP_003251277.1	in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA
YP_003251278.1	binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit
YP_003251279.1	present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors
YP_003251280.1	PFAM: methyltransferase small; KEGG: gka:GK0097 hypothetical protein
YP_003251281.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; subunit beta is part of the catalytic core which binds with a sigma factor to produce the holoenzyme
YP_003251282.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter
YP_003251283.1	in Bacillus subtilis this non-essential protein associates with the ribosome
YP_003251284.1	interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance
YP_003251285.1	binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit
YP_003251286.1	EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene
YP_003251287.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu
YP_003251288.1	NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex
YP_003251289.1	binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin
YP_003251290.1	L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA
YP_003251291.1	binds third domain of 23S rRNA and protein L29; part of exit tunnel
YP_003251292.1	one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation
YP_003251293.1	protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
YP_003251294.1	binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center
YP_003251295.1	forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation
YP_003251296.1	located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e
YP_003251297.1	one of the stabilizing components for the large ribosomal subunit
YP_003251298.1	primary binding protein; helps mediate assembly; involved in translation fidelity
YP_003251299.1	binds to the 23S rRNA between the centers for peptidyl transferase and GTPase
YP_003251300.1	assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel
YP_003251301.1	part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13
YP_003251302.1	located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif
YP_003251303.1	binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
YP_003251304.1	ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance
YP_003251305.1	binds 5S rRNA along with protein L5 and L25
YP_003251306.1	located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance
YP_003251307.1	L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7
YP_003251308.1	late assembly protein
YP_003251309.1	forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase
YP_003251310.1	essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP
YP_003251311.1	catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn
YP_003251312.1	stimulates the activities of the other two initiation factors, IF-2 and IF-3
YP_003251313.1	smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif
YP_003251314.1	located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA
YP_003251315.1	located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3
YP_003251316.1	catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme
YP_003251317.1	is a component of the macrolide binding site in the peptidyl transferase center
YP_003251318.1	with CbiNQ forms the ABC transporter for cobalt import; Bacillus spp. have two adjacent copies of this gene
YP_003251319.1	with CbiNQ forms the ABC transporter for cobalt import; Bacillus spp. have two adjacent copies of this gene
YP_003251320.1	PFAM: cobalt transporter; KEGG: gka:GK0137 cobalt transporter system (permease)
YP_003251321.1	mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability
YP_003251322.1	in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit
YP_003251323.1	forms a direct contact with the tRNA during translation
YP_003251324.1	PFAM: protein of unknown function DUF2521; KEGG: gka:GK0141 hypothetical protein
YP_003251325.1	KEGG: gka:GK0142 germination-specific N-acetylmuramoyl-L-alanine amidase (cell wall hydrolase) (autolysin); TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin
YP_003251326.1	PFAM: ATPase-like, ParA/MinD; KEGG: gka:GK0143 ATPase involved in chromosome partitioning
YP_003251327.1	KEGG: gtn:GTNG_0142 spore germination protein GerD
YP_003251328.1	KEGG: gka:GK0147 KinB signaling pathway activation protein
YP_003251329.1	TIGRFAM: polysaccharide deacetylase family sporulation protein PdaB; PFAM: polysaccharide deacetylase; KEGG: gka:GK0148 polysaccharide deacetylase
YP_003251331.1	TIGRFAM: arginase; PFAM: arginase/agmatinase/formiminoglutamase; KEGG: gka:GK0149 arginase
YP_003251332.1	Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription: this protein is involved in detoxification and protection against antimicrobial
YP_003251333.1	KEGG: gka:GK0151 hypothetical protein
YP_003251334.1	PFAM: protein of unknown function DUF147; KEGG: gka:GK0152 hypothetical protein
YP_003251335.1	PFAM: YbbR family protein; KEGG: gka:GK0153 hypothetical protein
YP_003251336.1	catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
YP_003251337.1	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
YP_003251338.1	PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: gwc:GWCH70_2089 transposase IS116/IS110/IS902 family protein
YP_003251339.1	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; primary sigma factor of bacterium
YP_003251340.1	KEGG: gtn:GTNG_2418 hypothetical protein
YP_003251341.1	PFAM: cytochrome C class I; KEGG: gka:GK2480 cytochrome C
YP_003251342.1	PFAM: protein of unknown function DUF633; KEGG: gka:GK2479 hypothetical protein
YP_003251343.1	PFAM: protein of unknown function DUF34; KEGG: gka:GK2478 hypothetical protein
YP_003251344.1	catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway
YP_003251345.1	KEGG: gka:GK2476 hypothetical protein
YP_003251346.1	PFAM: DEAD/DEAH box helicase; helicase domain protein; SMART: DEAD-like helicase ; helicase; KEGG: gka:GK2475 ATP-dependent RNA helicase
YP_003251347.1	Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues
YP_003251348.1	KEGG: gka:GK2473 hypothetical protein
YP_003251349.1	PFAM: protein of unknown function DUF2179; protein of unknown function DUF161; KEGG: gka:GK2472 hypothetical protein
YP_003251350.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK2471 metal (zinc) ABC transporter ATP-binding protein
YP_003251351.1	PFAM: ABC transporter; KEGG: gka:GK2470 metal (zinc) ABC transporter (permease)
YP_003251352.1	PFAM: ferric-uptake regulator; KEGG: gka:GK2469 FUR family transcriptional regulator
YP_003251353.1	KEGG: gka:GK2468 hypothetical protein
YP_003251354.1	KEGG: gka:GK2467 hypothetical protein
YP_003251355.1	catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis
YP_003251356.1	KEGG: gka:GK2465 hypothetical protein
YP_003251357.1	TIGRFAM: phosphate binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: gka:GK2463 phosphate ABC transporter (phosphate-binding protein)
YP_003251358.1	TIGRFAM: phosphate ABC transporter inner membrane subunit PstC; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gka:GK2462 phosphate ABC transporter (permease)
YP_003251359.1	TIGRFAM: phosphate ABC transporter inner membrane subunit PstA; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gka:GK2461 phosphate ABC transporter (permease)
YP_003251360.1	PFAM: protein of unknown function DUF1189; KEGG: gka:GK2460 hypothetical protein
YP_003251361.1	PFAM: Manganese/iron superoxide dismutase-like; KEGG: gka:GK2457 manganese superoxide dismutase
YP_003251362.1	KEGG: gka:GK1903 transposase
YP_003251363.1	KEGG: gka:GK2456 hypothetical protein
YP_003251364.1	PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: gka:GK2455 peptidoglycan biosynthesis (penicillin-binding protein 2A)
YP_003251365.1	KEGG: gka:GK2454 phosphate ABC transporter ATP-binding protein; TIGRFAM: phosphate ABC transporter ATPase; PFAM: ABC transporter related; SMART: ATPase AAA
YP_003251366.1	KEGG: gka:GK2453 hypothetical protein
YP_003251367.1	KEGG: gka:GK2452 hypothetical protein
YP_003251368.1	in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif
YP_003251369.1	TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: gka:GK2449 5-formyltetrahydrofolate cyclo-ligase
YP_003251370.1	PFAM: protein of unknown function DUF92 transmembrane; KEGG: gka:GK2448 hypothetical protein
YP_003251371.1	KEGG: gka:GK2447 hypothetical protein
YP_003251372.1	PFAM: rhomboid family protein; KEGG: gka:GK2446 hypothetical protein
YP_003251373.1	KEGG: gka:GK2445 hypothetical protein
YP_003251374.1	PFAM: GerA spore germination protein; KEGG: gka:GK2444 stage V sporulation protein AF
YP_003251375.1	PFAM: protein of unknown function DUF910; KEGG: gka:GK2443 hypothetical protein
YP_003251376.1	TIGRFAM: glucokinase, ROK family; PFAM: ROK family protein; KEGG: gka:GK2442 glucokinase
YP_003251377.1	PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A; KEGG: gka:GK2441 gamma-D-glutamyl-L-diamino acid endopeptidase I (endopeptidase I)
YP_003251378.1	KEGG: gka:GK2440 hypothetical protein
YP_003251379.1	PFAM: beta-lactamase; KEGG: gka:GK2439 hypothetical protein
YP_003251380.1	PFAM: protein of unknown function DUF185; KEGG: gka:GK2438 hypothetical protein
YP_003251381.1	KEGG: gwc:GWCH70_2373 hypothetical protein
YP_003251382.1	SMART: regulatory protein ArsR; KEGG: gka:GK2436 hypothetical protein
YP_003251383.1	PFAM: transposase IS4 family protein; KEGG: gka:GK2942 hypothetical protein
YP_003251385.1	PFAM: type II secretion system protein E; SMART: AAA ATPase; KEGG: gka:GK2435 DNA transport machinary
YP_003251386.1	PFAM: type II secretion system F domain; KEGG: gka:GK2434 DNA transport machinery
YP_003251387.1	KEGG: gka:GK2433 DNA transport machinery (exogenous DNA-binding protein)
YP_003251388.1	KEGG: gka:GK2432 hypothetical protein
YP_003251389.1	KEGG: gka:GK2431 hypothetical protein
YP_003251390.1	KEGG: gka:GK2430 hypothetical protein
YP_003251391.1	KEGG: gka:GK2429 hypothetical protein
YP_003251392.1	KEGG: gka:GK2428 hypothetical protein
YP_003251393.1	KEGG: gka:GK2427 hypothetical protein
YP_003251394.1	PFAM: SNF2-related protein; helicase; type III restriction protein res subunit; SMART: DEAD-like helicase ; helicase domain protein; KEGG: gka:GK2426 DNA/RNA helicase
YP_003251395.1	catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein
YP_003251396.1	acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein
YP_003251397.1	acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein
YP_003251398.1	PFAM: ROK family protein; KEGG: gka:GK2422 transcriptional repressor of the xylose operon
YP_003251399.1	PFAM: rhodanese; SMART: Rhodanese domain protein; KEGG: gka:GK2421 hypothetical protein
YP_003251400.1	PFAM: biotin/lipoate A/B protein ligase; KEGG: gka:GK2420 lipoate protein ligase
YP_003251401.1	PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: gwc:GWCH70_2089 transposase IS116/IS110/IS902 family protein
YP_003251403.1	PFAM: peptidoglycan-binding lysin domain; glycoside hydrolase family 18; SMART: peptidoglycan-binding LysM; chitinase II; KEGG: gka:GK2418 spore peptidoglycan hydrolase (N-acetylglucosaminidase)
YP_003251404.1	KEGG: gka:GK2417 hypothetical protein
YP_003251405.1	PFAM: protein of unknown function UCP012608; KEGG: gtn:GTNG_2349 hypothetical protein
YP_003251406.1	TIGRFAM: spore photoproduct lyase; PFAM: radical SAM domain protein; KEGG: gtn:GTNG_2348 spore photoproduct lyase
YP_003251407.1	involved in manganese homeostasis; activates the transcription of the mntABCD operon
YP_003251408.1	PFAM: patatin; KEGG: gka:GK2415 hypothetical protein
YP_003251409.1	KEGG: gka:GK2414 hypothetical protein
YP_003251410.1	PFAM: protein of unknown function DUF1385; KEGG: gka:GK2413 hypothetical protein
YP_003251411.1	KEGG: gka:GK2412 hypothetical protein
YP_003251412.1	PFAM: peptidase M24; creatinase; KEGG: gka:GK2411 Xaa-Pro dipeptidase
YP_003251413.1	Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA
YP_003251414.1	KEGG: gka:GK2409 hypothetical protein
YP_003251415.1	TIGRFAM: stage III sporulation protein AA; SMART: AAA ATPase; KEGG: gka:GK2408 stage III sporulation protein AA
YP_003251416.1	necessary for complete engulfment of forespore
YP_003251417.1	TIGRFAM: stage III sporulation protein AC; PFAM: stage III sporulation AC family protein; KEGG: gka:GK2406 stage III sporulation protein AC
YP_003251418.1	TIGRFAM: stage III sporulation protein AD; PFAM: sporulation stage III protein AD; KEGG: gka:GK2405 stage III sporulation protein AD
YP_003251419.1	TIGRFAM: stage III sporulation protein AE; PFAM: sporulation stage III protein AE; KEGG: gka:GK2404 stage III sporulation protein AE
YP_003251420.1	TIGRFAM: stage III sporulation protein AF; PFAM: sporulation stage III protein AF; KEGG: gka:GK2403 stage III sporulation protein AF
YP_003251421.1	TIGRFAM: stage III sporulation protein AG; KEGG: gka:GK2402 stage III sporulation protein AG
YP_003251422.1	KEGG: gka:GK2401 stage III sporulation protein AH
YP_003251423.1	composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism
YP_003251424.1	an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism
YP_003251425.1	PFAM: protein of unknown function DUF322; KEGG: gka:GK2398 hypothetical protein
YP_003251426.1	Regulates rRNA biosynthesis by transcriptional antitermination
YP_003251427.1	catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate
YP_003251428.1	bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides
YP_003251429.1	catalyzes the bidirectional exonucleolytic cleavage of DNA
YP_003251430.1	PFAM: polyprenyl synthetase; KEGG: gka:GK2393 geranyltranstransferase (farnesyl-diphosphate synthase)
YP_003251431.1	catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate
YP_003251432.1	KEGG: gka:GK2391 hypothetical protein; TIGRFAM: hemolysin A; PFAM: RNA-binding S4 domain protein; ribosomal RNA methyltransferase RrmJ/FtsJ; SMART: RNA-binding S4 domain protein
YP_003251433.1	regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes
YP_003251434.1	TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: gka:GK2389 DNA repair protein (recombination protein N)
YP_003251435.1	KEGG: gka:GK2388 stage IV sporulation protein B; TIGRFAM: stage IV sporulation protein B; PFAM: peptidase S55 SpoIVB; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein
YP_003251436.1	KEGG: gka:GK2387 stage 0 sporulation protein A (two-component response regulator); TIGRFAM: sporulation transcription factor Spo0A; PFAM: sporulation initiation factor Spo0A ; response regulator receiver; SMART: response regulator receiver
YP_003251437.1	KEGG: gka:GK2386 hypothetical protein
YP_003251438.1	PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: gka:GK2385 glycerophosphodiester phosphodiesterase
YP_003251439.1	KEGG: gka:GK2384 hypothetical protein
YP_003251440.1	KEGG: gka:GK2383 sigma-L-dependent transcriptional regulator; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; PAS fold-4 domain protein; PAS fold domain protein; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; PAS domain containing protein
YP_003251441.1	catalyzes the synthesis of butanoylphosphate from butanoyl-CoA and inorganic phosphate
YP_003251442.1	PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: gka:GK2381 leucine dehydrogenase
YP_003251443.1	catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate
YP_003251444.1	E3 component of the branched-chain alpha-keto acid dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide
YP_003251445.1	PFAM: dehydrogenase E1 component; KEGG: gka:GK2378 branched-chain alpha-keto acid dehydrogenase E1 component alpha chain (2-oxoisovalerate dehydrogenase subunit alpha)
YP_003251446.1	PFAM: transketolase; transketolase domain protein; KEGG: gka:GK2377 branched-chain alpha-keto acid dehydrogenase E1 component beta chain (2-oxoisovalerate dehydrogenase subunit beta)
YP_003251447.1	PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; KEGG: gka:GK2376 branched-chain alpha-keto acid dehydrogenase subunit E2
YP_003251450.1	KEGG: gka:GK2375 hypothetical protein
YP_003251451.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: gka:GK2374 two-component response regulator
YP_003251452.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: gka:GK2373 two-component sensor histidine kinase
YP_003251453.1	PFAM: protein of unknown function DUF820; KEGG: gka:GK2372 hypothetical protein
YP_003251454.1	KEGG: gka:GK2371 methylmalonyl-CoA mutase small subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase
YP_003251455.1	MDM; functions in conversion of succinate to propionate
YP_003251456.1	functions in transport of arginine/ornithine; inner membrane ATPase that cleaves ATP and phosphorylates two periplasmic proteins that function as two distinct transporters, the AO (arginine and ornithine) and LAO (lysine, arginine, and ornithine) periplasmic binding proteins
YP_003251457.1	PFAM: protein of unknown function DUF1094; KEGG: gka:GK2368 hypothetical protein
YP_003251458.1	PFAM: HIRAN; KEGG: gka:GK2367 hypothetical protein
YP_003251459.1	PFAM: DNA polymerase III subunit beta; KEGG: afl:Aflv_1199 predicted nucleotidyltransferase
YP_003251460.1	PFAM: N-6 DNA methylase; restriction modification system DNA specificity domain; KEGG: gwc:GWCH70_3440 N-6 DNA methylase
YP_003251461.1	PFAM: N-6 DNA methylase; KEGG: gwc:GWCH70_1644 N-6 DNA methylase
YP_003251462.1	PFAM: restriction modification system DNA specificity domain; KEGG: vei:Veis_3010 restriction modification system DNA specificity subunit
YP_003251463.1	KEGG: gwc:GWCH70_1642 type I site-specific deoxyribonuclease, HsdR family; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: protein of unknown function DUF450; helicase; type III restriction protein res subunit; SMART: DEAD-like helicase
YP_003251466.1	KEGG: similar to Golgin subfamily A member 6 (Golgin linked to PML)   (Golgin-like protein)
YP_003251468.1	PFAM: DEAD/DEAH box helicase; protein of unknown function DUF1998; helicase; SMART: DEAD-like helicase ; helicase; KEGG: cpy:Cphy_0588 DEAD/DEAH box helicase domain-containing protein
YP_003251469.1	PFAM: DNA polymerase III subunit beta; KEGG: gwc:GWCH70_1381 DNA polymerase III subunit beta
YP_003251470.1	KEGG: gka:GK1143 hypothetical protein
YP_003251471.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK2364 ABC transporter ATP-binding protein
YP_003251472.1	KEGG: gka:GK2363 hypothetical protein
YP_003251473.1	KEGG: gka:GK1140 hypothetical protein
YP_003251474.1	KEGG: gka:GK1138 hypothetical protein
YP_003251475.1	PFAM: transposase IS4 family protein; KEGG: gwc:GWCH70_1919 transposase IS4 family protein
YP_003251477.1	PFAM: protein of unknown function DUF939; KEGG: gka:GK2353 hypothetical protein
YP_003251478.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: gka:GK2352 hypothetical protein
YP_003251479.1	KEGG: gtn:GTNG_2294 hypothetical protein
YP_003251480.1	TIGRFAM: methylmalonyl-CoA epimerase; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gka:GK2350 lactoylglutathione lyase
YP_003251481.1	PFAM: carboxyl transferase; KEGG: gka:GK2349 propionyl-CoA carboxylase
YP_003251482.1	KEGG: gka:GK1903 transposase
YP_003251483.1	PFAM: transposase IS4 family protein; KEGG: gwc:GWCH70_3382 transposase IS4 family protein
YP_003251484.1	SMART: ATPase AAA; KEGG: gwc:GWCH70_3192 ATPase AAA
YP_003251485.1	PFAM: Integrase catalytic region; transposase-like Mu; KEGG: gka:GK1916 IS1604-like transposase
YP_003251486.1	KEGG: bcu:BCAH820_B0288 hypothetical protein
YP_003251487.1	PFAM: permease; KEGG: bcu:BCAH820_B0289 permease
YP_003251488.1	PFAM: transposase IS4 family protein; KEGG: afl:Aflv_2105 transposase
YP_003251489.1	PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bcu:BCAH820_B0290 MarR family transcriptional regulator protein
YP_003251490.1	KEGG: gwc:GWCH70_2050 transposase
YP_003251491.1	KEGG: bcu:BCAH820_B0299 hypothetical protein
YP_003251492.1	TIGRFAM: peptidase T-like protein; PFAM: peptidase M20; peptidase dimerisation domain protein; peptidase M42 family protein; KEGG: gka:GK2347 tripeptidase
YP_003251493.1	PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: gka:GK2346 chemotaxis protein
YP_003251494.1	KEGG: gka:GK2345 hypothetical protein
YP_003251495.1	catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate
YP_003251496.1	PFAM: transposase IS4 family protein; KEGG: gka:GK2942 hypothetical protein
YP_003251497.1	SMART: ATPase AAA; KEGG: gwc:GWCH70_3192 ATPase AAA
YP_003251499.1	PFAM: transposase IS4 family protein; KEGG: gwc:GWCH70_1919 transposase IS4 family protein
YP_003251500.1	PFAM: Fibronectin-binding family protein; KEGG: pjd:Pjdr2_0255 fibronectin-binding family protein
YP_003251501.1	KEGG: gka:GK1903 transposase
YP_003251502.1	PFAM: transposase IS4 family protein; KEGG: gka:GK3116 transposase
YP_003251503.1	PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: gka:GK0784 hypothetical protein
YP_003251504.1	KEGG: gka:GK0783 hypothetical protein
YP_003251505.1	PFAM: protein of unknown function DUF214; KEGG: gka:GK2343 ABC transporter (permease)
YP_003251506.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK2342 ABC transporter ATP-binding protein
YP_003251507.1	PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: gka:GK2341 two-component sensor histidine kinase
YP_003251508.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: gka:GK2340 two-component response regulator
YP_003251509.1	KEGG: gka:GK2339 hypothetical protein
YP_003251510.1	PFAM: glycoside hydrolase family 1; KEGG: gka:GK2337 beta-glucosidase
YP_003251511.1	PFAM: cyclase family protein; KEGG: gka:GK2335 hypothetical protein
YP_003251512.1	catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate
YP_003251513.1	member of metallo-beta-lactamase family; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions
YP_003251514.1	catalyzes the reduction of alpha, beta-unsaturated aldehydes and ketones; reduces the nitro group nitroester and nitroaromatic compounds
YP_003251515.1	catalyzes the formation of L-proline from pyrroline-5-carboxylate
YP_003251516.1	PFAM: beta-lactamase; KEGG: gka:GK2330 hypothetical protein
YP_003251517.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gka:GK2329 short chain dehydrogenase/reductase family oxidoreductase
YP_003251518.1	KEGG: gka:GK2328 hypothetical protein
YP_003251519.1	PFAM: Iron sulphur domain-containing, CDGSH-type; SMART: zinc finger CDGSH-type domain protein; KEGG: gtn:GTNG_2257 hypothetical protein
YP_003251520.1	PFAM: HesB/YadR/YfhF-family protein; KEGG: gka:GK2326 hypothetical protein
YP_003251521.1	KEGG: gka:GK2325 hypothetical protein
YP_003251522.1	KEGG: gka:GK2324 hypothetical protein
YP_003251523.1	KEGG: gka:GK2323 hypothetical protein
YP_003251524.1	PFAM: major facilitator superfamily MFS_1; KEGG: gka:GK2322 cyanate transporter
YP_003251525.1	PFAM: aldo/keto reductase; KEGG: gka:GK2321 hypothetical protein
YP_003251526.1	PFAM: NUDIX hydrolase; KEGG: gka:GK2320 ADP-ribose pyrophosphatase
YP_003251527.1	KEGG: gka:GK2319 hypothetical protein
YP_003251528.1	TIGRFAM: stage II sporulation protein M; PFAM: protein of unknown function DUF95 transmembrane; KEGG: gka:GK2318 stage II sporulation protein M
YP_003251529.1	PFAM: ferric-uptake regulator; KEGG: gka:GK2317 FUR family transcriptional regulator
YP_003251530.1	KEGG: gka:GK2316 hypothetical protein
YP_003251531.1	site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs
YP_003251532.1	catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose
YP_003251533.1	catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation
YP_003251534.1	TIGRFAM: pyrimidine-nucleoside phosphorylase; PFAM: glycosyl transferase family 3; Pyrimidine nucleoside phosphorylase domain; glycosyl transferase, family 3-like; KEGG: gka:GK2312 pyrimidine-nucleoside phosphorylase (PYNP)
YP_003251535.1	PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; beta-lactamase; Penicillin-binding protein 5 domain protein; KEGG: gka:GK2311 D-alanyl-D-alanine carboxypeptidase (penicilin binding protein)
YP_003251536.1	TIGRFAM: anti-sigma F factor antagonist; anti-anti-sigma factor; PFAM: sulfate transporter/antisigma-factor antagonist STAS; KEGG: gka:GK2310 anti-sigma F factor antagonist (stage II sporulation protein AA)
YP_003251537.1	binds to sigma F preventing its association with RNA polymerase during sporulation
YP_003251538.1	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the prespore at the onset of sporulation. Interaction with spoIIAB inhibits sigma F activity throughout the cell before the formation of the asymmetric septum; after septation the interaction is confined to the mother cell, and sigma F activity is released in the prespore.
YP_003251539.1	KEGG: gka:GK2307 stage V sporulation protein AA
YP_003251540.1	KEGG: gka:GK2306 stage V sporulation protein AB
YP_003251541.1	PFAM: SpoVA protein; KEGG: gka:GK2305 stage V sporulation protein AC
YP_003251542.1	TIGRFAM: stage V sporulation protein AD; PFAM: stage V sporulation AD family protein; KEGG: gka:GK2304 stage V sporulation protein AD
YP_003251543.1	PFAM: SpoVA protein; KEGG: gka:GK2303 sporulation protein
YP_003251544.1	KEGG: gka:GK2302 stage V sporulation protein AE
YP_003251545.1	PFAM: GerA spore germination protein; KEGG: gka:GK2301 stage V sporulation protein AF
YP_003251546.1	TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: gka:GK2300 diaminopimelate decarboxylase
YP_003251547.1	PFAM: protein of unknown function DUF1002; KEGG: gka:GK2299 hypothetical protein
YP_003251548.1	PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: gka:GK2298 peptidyl-prolyl cis-trans isomerase (rotamase)
YP_003251549.1	KEGG: gka:GK2297 riboflavin-specific deaminase (diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase ); TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding
YP_003251550.1	catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine
YP_003251551.1	bifunctional enzyme DHBP synthase/GTP cyclohydrolase II; functions in riboflavin synthesis; converts GTP to 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine; converts ribulose 5-phopshate to 3,4-dihydroxy-2-butanone 4-phosphate
YP_003251552.1	RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; subunit beta of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not
YP_003251553.1	PFAM: GCN5-related N-acetyltransferase; KEGG: gka:GK2293 hypothetical protein
YP_003251554.1	PFAM: protein of unknown function DUF309; KEGG: gka:GK2292 hypothetical protein
YP_003251555.1	functions during chromosome segregation; may form a condensin-like structure with SMC and ScpB
YP_003251556.1	TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: gka:GK2290 hypothetical protein
YP_003251557.1	KEGG: gka:GK2289 hypothetical protein
YP_003251558.1	PFAM: Manganese/iron superoxide dismutase-like; KEGG: gka:GK2288 superoxide dismutase
YP_003251559.1	PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: gka:GK2286 D-alanyl-D-alanine carboxypeptidase
YP_003251560.1	PFAM: nucleoside recognition domain protein; KEGG: gka:GK2285 spore maturation protein
YP_003251561.1	PFAM: nucleoside recognition domain protein; KEGG: gka:GK2284 spore maturation protein
YP_003251562.1	PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: gka:GK2283 ribosomal large subunit pseudouridine synthase B (pseudouridylate synthase) (uracil hydrolyase)
YP_003251563.1	catalyzes the reduction of the disulfide bonds in the heme binding site of apocytochrome C
YP_003251564.1	PFAM: ResB family protein; KEGG: gka:GK2281 cytochrome C biogenesis protein
YP_003251565.1	TIGRFAM: cytochrome C biogenesis protein CcsB; PFAM: cytochrome C assembly protein; KEGG: gka:GK2280 cytochrome C biogenesis protein
YP_003251566.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: gka:GK2279 two-component response regulator
YP_003251567.1	KEGG: gka:GK2278 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; hypothetical protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein
YP_003251568.1	KEGG: gka:GK2277 N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; amidohydrolase
YP_003251569.1	TIGRFAM: glucosamine-6-phosphate isomerase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: gka:GK2276 N-acetylglucosamine-6-phosphate isomerase
YP_003251570.1	PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: gka:GK2275 GntR family transcriptional regulator
YP_003251571.1	TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system EIIB/cysteine, phosphorylation site; KEGG: gtn:GTNG_2202 PTS system, N-acetylglucosamine-specific enzyme II ABC component
YP_003251572.1	KEGG: gtn:GTNG_2201 hypothetical protein
YP_003251573.1	PFAM: histidine kinase internal region; KEGG: gka:GK2273 hypothetical protein
YP_003251574.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; KEGG: gka:GK2272 two-component response regulator
YP_003251575.1	KEGG: gka:GK2271 hypothetical protein
YP_003251576.1	PFAM: acetamidase/Formamidase; KEGG: gka:GK2270 acetamidase/formamidase
YP_003251577.1	PFAM: amino acid permease-associated region; KEGG: gka:GK2269 amino acid transporter
YP_003251578.1	PFAM: protein of unknown function DUF1696; KEGG: gtn:GTNG_2200 hypothetical protein
YP_003251579.1	PFAM: NUDIX hydrolase; KEGG: bca:BCE_0596 MutT/NUDIX family protein
YP_003251580.1	PFAM: periplasmic binding protein; KEGG: gka:GK2266 ferric ion ABC transporter (ferric ion-binding protein)
YP_003251581.1	PFAM: transporter permease; KEGG: gka:GK2265 ferric ion ABC transporter (permease)
YP_003251582.1	PFAM: protein of unknown function DUF105; ABC transporter related; SMART: ATPase AAA; KEGG: gka:GK2264 ferric ion ABC transporter (permease)
YP_003251583.1	CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
YP_003251584.1	TIGRFAM: L-threonine-O-3-phosphate decarboxylase; PFAM: aminotransferase class I and II; KEGG: gka:GK2262 histidinol-phosphate aminotransferase 1 (imidazole acetol-phosphate transaminase 1) (cobalamin biosynthesis)
YP_003251585.1	PFAM: cobalbumin biosynthesis protein; KEGG: gka:GK2261 bifunctional cobalamin biosynthesis protein (cobinamide kinase; cobinamide phosphate guanylyltransferase)
YP_003251586.1	PFAM: cobalamin-5-phosphate synthase CobS; KEGG: gka:GK2260 cobalamin-5-phosphate synthase
YP_003251587.1	PFAM: phosphoglycerate mutase; KEGG: gka:GK2259 hypothetical protein
YP_003251588.1	KEGG: gka:GK2258 hypothetical protein
YP_003251589.1	TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: gka:GK2257 hypothetical protein
YP_003251590.1	KEGG: gka:GK2256 hypothetical protein
YP_003251591.1	KEGG: gka:GK2255 hypothetical protein
YP_003251592.1	Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; in B. subtilis has been shown to regulate cell envelope modification and may effect antibiotic resistance
YP_003251593.1	KEGG: gka:GK2253 negative regulator of sigma-X activity
YP_003251594.1	KEGG: gka:GK2249 hypothetical protein
YP_003251595.1	TIGRFAM: histidinol phosphate phosphatase HisJ family; PFAM: PHP domain protein; KEGG: gka:GK2248 histidinol phosphatase
YP_003251596.1	catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate
YP_003251597.1	PFAM: inorganic pyrophosphatase; KEGG: gka:GK2246 inorganic pyrophosphatase (pyrophosphate phospho-hydrolase)
YP_003251598.1	KEGG: gwc:GWCH70_2195 ferredoxin (4Fe-4S)
YP_003251599.1	KEGG: gka:GK2244 hypothetical protein
YP_003251600.1	KEGG: gka:GK2243 ATP-dependent DNA helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: DEAD/DEAH box helicase domain protein; helicase; SMART: DEAD-like helicase ; helicase domain protein
YP_003251601.1	PFAM: hypothetical protein; KEGG: gka:GK2242 hypothetical protein
YP_003251602.1	PFAM: peptidoglycan-binding lysin domain; SMART: peptidoglycan-binding LysM; KEGG: gka:GK2241 hypothetical protein
YP_003251603.1	KEGG: gka:GK2240 hypothetical protein
YP_003251604.1	PFAM: manganese containing catalase; KEGG: gka:GK2239 spore coat peptide assembly protein
YP_003251605.1	KEGG: gtn:GTNG_2176 CotJB protein
YP_003251606.1	KEGG: gtn:GTNG_2175 CotJA protein
YP_003251607.1	KEGG: gka:GK2237 hypothetical protein
YP_003251608.1	enables recognition and targeting of proteins for proteolysis, involved in negative regulation of competence
YP_003251609.1	PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: gka:GK2235 NAD-specific glutamate dehydrogenase (NAD-GDH)
YP_003251610.1	PFAM: HI0933 family protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gka:GK2234 thioredoxin reductase
YP_003251611.1	PFAM: asparaginase/glutaminase; KEGG: gka:GK2233 L-asparaginase (L-asparagine amidohydrolase)
YP_003251612.1	KEGG: gka:GK2232 hypothetical protein
YP_003251613.1	TIGRFAM: spore cortex-lytic enzyme; PFAM: cell wall hydrolase SleB; peptidoglycan-binding protein; KEGG: gka:GK2231 sporulation specific N-acetylmuramoyl-L-alanine amidase (spore cortex-lytic enzyme)
YP_003251614.1	TIGRFAM: germination protein YpeB; PFAM: propeptide PepSY amd peptidase M4; KEGG: gka:GK2230 sporulation protein
YP_003251615.1	PFAM: type IV pilus assembly PilZ; KEGG: gka:GK2229 hypothetical protein
YP_003251616.1	KEGG: gka:GK2228 hypothetical protein
YP_003251617.1	Catalyzes the formation of (d)CDP from ATP and (d)CMP
YP_003251618.1	PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: gka:GK2226 1-acylglycerol-3-phosphate O-acyltransferase
YP_003251619.1	in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins
YP_003251620.1	KEGG: bcy:Bcer98_1223 hypothetical protein
YP_003251621.1	KEGG: gka:GK2224 hypothetical protein
YP_003251622.1	KEGG: gka:GK2223 hypothetical protein
YP_003251623.1	KEGG: gka:GK2222 hypothetical protein
YP_003251624.1	EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains
YP_003251625.1	catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate
YP_003251626.1	KEGG: gka:GK2219 hypothetical protein
YP_003251627.1	KEGG: gka:GK2218 hypothetical protein
YP_003251628.1	TIGRFAM: stage IV sporulation protein A; PFAM: sporulation stage IV protein A; KEGG: gka:GK2217 stage IV sporulation protein A (spore cortex formation and coat assembly)
YP_003251629.1	PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: gtn:GTNG_2149 DNA binding protein HU
YP_003251630.1	involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer
YP_003251631.1	tryptophan RNA-binding attenuator protein; binds leader Trp transcript causing transcription termination
YP_003251632.1	PFAM: Heptaprenyl diphosphate synthase subunit 1; KEGG: gka:GK2212 heptaprenyl diphosphate synthasecomponent I (spore germination protein C1)
YP_003251633.1	Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone
YP_003251634.1	KEGG: gka:GK2210 heptaprenyl diphosphate synthasecomponent II (spore germination protein C3); TIGRFAM: heptaprenyl diphosphate synthase component II; PFAM: polyprenyl synthetase
YP_003251635.1	catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate
YP_003251636.1	KEGG: gka:GK2208 chemotactic methyltransferase; PFAM: MCP methyltransferase CheR-type; SMART: MCP methyltransferase CheR-type
YP_003251637.1	catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis
YP_003251638.1	catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis
YP_003251639.1	KEGG: gka:GK2205 chorismate mutase; TIGRFAM: chorismate mutase; PFAM: chorismate mutase of the AroH class
YP_003251640.1	with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine
YP_003251641.1	Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate
YP_003251642.1	involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water
YP_003251643.1	catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis
YP_003251644.1	catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate
YP_003251645.1	catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis
YP_003251646.1	catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis
YP_003251647.1	catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate
YP_003251648.1	catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis
YP_003251649.1	PFAM: hypothetical protein; SMART: Tetratricopeptide repeat; KEGG: gka:GK2195 hypothetical protein
YP_003251650.1	PFAM: protein of unknown function UPF0302 ; conserved hypothetical protein; KEGG: gka:GK2194 hypothetical protein
YP_003251651.1	PFAM: protein of unknown function DUF2487; KEGG: gka:GK2193 hypothetical protein
YP_003251652.1	PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: gka:GK2192 menaquinol-cytochrome C reductase iron-sulfur subunit (Rieske iron-sulfur protein)
YP_003251653.1	electron transporter
YP_003251654.1	PFAM: cytochrome C class I; KEGG: gka:GK2190 menaquinol-cytochrome C reductase cytochrome b/c subunit
YP_003251655.1	PFAM: protein of unknown function DUF1405; KEGG: gka:GK2189 hypothetical protein
YP_003251656.1	TIGRFAM: sporulation protein YpjB; PFAM: sporulation protein YpjB; KEGG: gka:GK2188 hypothetical protein
YP_003251657.1	PFAM: protein of unknown function DUF2179; protein of unknown function DUF161; KEGG: gka:GK2187 hypothetical protein
YP_003251658.1	PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: gka:GK2186 hypothetical protein
YP_003251659.1	catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis
YP_003251660.1	catalyzes the formation of methylglyoxal from glycerone phosphate
YP_003251661.1	PFAM: LmbE family protein; KEGG: gka:GK2183 hypothetical protein
YP_003251662.1	PFAM: glycosyl transferase group 1; KEGG: gka:GK2182 hypothetical protein
YP_003251663.1	catalyzes the addition and repair of the 3'-terminal CCA sequence in tRNA; these proteins belong to the CCA-adding enzyme subfamily 2 which does not have phosphohydrolase activity
YP_003251664.1	KEGG: gka:GK2180 biotin [acetyl-CoA carboxylase] synthetase; transcriptional repressor of the biotin operon; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; biotin operon repressor; PFAM: biotin/lipoate A/B protein ligase; hypothetical protein; biotin protein ligase domain protein
YP_003251665.1	catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate
YP_003251666.1	catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine
YP_003251667.1	Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5)
YP_003251668.1	unwinds DNA
YP_003251669.1	KEGG: gka:GK2174 hypothetical protein
YP_003251670.1	PFAM: propeptide PepSY amd peptidase M4; KEGG: gka:GK2173 hypothetical protein
YP_003251671.1	catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate
YP_003251672.1	catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_003251673.1	TIGRFAM: primosome, DnaD subunit; PFAM: DnaD and phage-associated region; KEGG: gka:GK2170 chromosome replication initiation protein
YP_003251674.1	KEGG: gka:GK2169 endonuclease III (DNA-(apurinic or apyrimidinic site) lyase); TIGRFAM: endonuclease III; PFAM: HhH-GPD family protein; helix-hairpin-helix motif; iron-sulfur cluster loop; SMART: HhH-GPD family protein
YP_003251675.1	TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Fibronectin type III domain protein; KEGG: gka:GK2168 penicillin-binding protein 1A/1B (pbp1) (penicillin-insensitive transglycosylase (peptidoglycan TGase); penicillin-sensitive transpeptidase (dd-transpeptidase))
YP_003251676.1	functions in homologous recombination, DNA repair, and chromosome segregation; binds preferentially to three- and four-stranded DNA intermediates; introduces specific nick sites in four-stranded DNA substrates; functions similarly to Escherichia coli RuvC
YP_003251677.1	KEGG: gka:GK2166 hypothetical protein
YP_003251678.1	PFAM: Domain of unknown function DUF1798; KEGG: gka:GK2165 hypothetical protein
YP_003251679.1	KEGG: gka:GK2164 hypothetical protein
YP_003251680.1	KEGG: gka:GK2163 hypothetical protein
YP_003251681.1	KEGG: gka:GK2162 hypothetical protein
YP_003251682.1	KEGG: gka:GK2161 sporulation-specific SASP protein (sigma-G-dependent sporulation specific SASP protein)
YP_003251683.1	KEGG: gka:GK2160 hypothetical protein
YP_003251684.1	KEGG: gwc:GWCH70_2098 hypothetical protein
YP_003251685.1	PFAM: heat shock protein Hsp20; KEGG: gka:GK2159 heat shock protein class I (low molecular weight)
YP_003251686.1	KEGG: gka:GK2158 hypothetical protein
YP_003251687.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: gka:GK2157 two-component response regulator
YP_003251688.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: gka:GK2156 two-component sensor histidine kinase
YP_003251689.1	KEGG: gka:GK2155 hypothetical protein
YP_003251690.1	PFAM: glycerol-3-phosphate responsive antiterminator; KEGG: gka:GK2154 transcriptional antiterminator of glycerol uptake operon
YP_003251691.1	PFAM: FAD dependent oxidoreductase; KEGG: gka:GK2153 glycerol-3-phosphate dehydrogenase
YP_003251692.1	PFAM: glycoside hydrolase clan GH-D; KEGG: gka:GK2152 alpha-galactosidase
YP_003251693.1	KEGG: gka:GK2151 hypothetical protein
YP_003251694.1	PFAM: glycoside hydrolase family 42 domain protein; beta-galactosidase trimerisation domain protein; beta-galactosidase domain protein; KEGG: csc:Csac_1018 beta-galactosidase
YP_003251695.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_4699 extracellular solute-binding protein family 1
YP_003251696.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: pjd:Pjdr2_4698 binding-protein-dependent transport systems inner membrane component
YP_003251697.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: pjd:Pjdr2_4697 binding-protein-dependent transport systems inner membrane component
YP_003251698.1	PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 42 domain 5 loop region; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; KEGG: bha:BH2723 beta-galactosidase
YP_003251700.1	catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism
YP_003251701.1	TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KR domain protein; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; KEGG: gka:GK2149 UDP-glucose 4-epimerase
YP_003251702.1	catalyzes the formation of alpha-D-glucose 1-phosphate and UDP-galactose from UDP-glucose and alpha-D-galactose 1-phosphate in galactose metabolism
YP_003251703.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: gka:GK2147 transcriptional regulator
YP_003251704.1	PFAM: heat shock protein Hsp20; KEGG: gka:GK2146 heat shock protein
YP_003251705.1	KEGG: gka:GK2145 hypothetical protein
YP_003251706.1	PFAM: integrase; KEGG: gwc:GWCH70_2825 integrase
YP_003251707.1	PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: gka:GK2025 transposase
YP_003251708.1	KEGG: sbn:Sbal195_1449 hypothetical protein
YP_003251709.1	PFAM: protein of unknown function UPF0066; KEGG: gtn:GTNG_2796  transcriptional regulator
YP_003251710.1	KEGG: gka:GK2903 hypothetical protein
YP_003251711.1	KEGG: gka:GK2902 hypothetical protein
YP_003251712.1	PFAM: periplasmic binding protein; KEGG: gka:GK2901 ferrichrome ABC transporter (substrate-binding protein)
YP_003251713.1	PFAM: transporter permease; KEGG: gka:GK2900 ferrichrome ABC transporter (permease)
YP_003251714.1	PFAM: transporter permease; KEGG: gka:GK2899 ferrichrome ABC transporter (permease)
YP_003251715.1	KEGG: gka:GK2898 hypothetical protein
YP_003251716.1	KEGG: gka:GK2883 hypothetical protein
YP_003251717.1	PFAM: lysine exporter (LYSE/YGGA); KEGG: gka:GK2882 hypothetical protein
YP_003251718.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: gka:GK2881 cation efflux transporter
YP_003251719.1	catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain
YP_003251720.1	catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate
YP_003251721.1	TIGRFAM: glucose-1-phosphate adenylyltransferase, GlgD subunit; KEGG: gtn:GTNG_2780 subunit of ADP-glucose pyrophosphorylase
YP_003251722.1	catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose
YP_003251723.1	KEGG: gtn:GTNG_2778 glycogen phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35
YP_003251724.1	TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; transposase IS891/IS1136/IS1341 family; KEGG: gka:GK2880 transposase
YP_003251725.1	PFAM: protein of unknown function DUF124; KEGG: gka:GK2879 hypothetical protein
YP_003251726.1	TIGRFAM: sporulation protein, yteA family; KEGG: gka:GK2878 hypothetical protein
YP_003251727.1	catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate
YP_003251728.1	TIGRFAM: isochorismate synthase; PFAM: chorismate binding-like; KEGG: gka:GK2876 menaquinone-specific isochorismate synthase
YP_003251729.1	SEPHCHC synthase; forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1- carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis
YP_003251730.1	PFAM: alpha/beta hydrolase fold; KEGG: gka:GK2874 hypothetical protein
YP_003251731.1	catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA
YP_003251732.1	converts O-succinylbenzoate to O-succinylbenzoyl-CoA
YP_003251733.1	KEGG: gka:GK2871 hypothetical protein
YP_003251734.1	PFAM: protein of unknown function DUF1540; KEGG: gka:GK2870 hypothetical protein
YP_003251735.1	PFAM: Uncharacterised conserved protein UCP020408; KEGG: gka:GK2869 hypothetical protein
YP_003251736.1	KEGG: gka:GK2868 hypothetical protein
YP_003251737.1	KEGG: gka:GK2867 hypothetical protein
YP_003251738.1	TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: gka:GK2866 hypothetical protein
YP_003251739.1	KEGG: afl:Aflv_0394 cytochrome bd-type quinol oxidase subunit 2
YP_003251740.1	PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: afl:Aflv_0395 cytochrome bd-type quinol oxidase subunit 1
YP_003251741.1	PFAM: periplasmic solute binding protein; KEGG: gka:GK2865 Mn/Zn ABC transporter (Mn/Zn-binding (LipO)protein) (surface adhesin A)
YP_003251742.1	PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: afl:Aflv_0397 GTPase (G3E type), CobW/P47K subfamily
YP_003251743.1	PFAM: protein of unknown function DUF37; KEGG: gka:GK2864 hypothetical protein
YP_003251744.1	catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2
YP_003251745.1	KEGG: gka:GK2862 hypothetical protein
YP_003251746.1	PFAM: ferritin; KEGG: gka:GK2861 starvation-induced protein controlled by sigma-B (general stress protein 20U)
YP_003251747.1	TIGRFAM: toxin secretion/phage lysis holin; PFAM: Holin toxin secretion/phage lysis; KEGG: gka:GK2860 hypothetical protein
YP_003251748.1	KEGG: gka:GK2859 hypothetical protein
YP_003251749.1	TIGRFAM: nucleoside triphosphatase YtkD; PFAM: NUDIX hydrolase; KEGG: gka:GK2858 hypothetical protein
YP_003251750.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gka:GK2857 nitrate/sulfonate/taurine/bicarbonate ABC transporter (permease)
YP_003251751.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK2856 nitrate/sulfonate/taurine/bicarbonate ABC transporter (ATP binding protein)
YP_003251752.1	PFAM: Resolvase domain; Recombinase; KEGG: bcl:ABC2865 site-specific recombinase for integration and excision
YP_003251753.1	PFAM: peptidase S24/S26A/S26B, conserved region; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: bcg:BCG9842_B1503 LexA repressor
YP_003251754.1	KEGG: bcg:BCG9842_B1504 hypothetical protein
YP_003251756.1	KEGG: afl:Aflv_0640 hypothetical protein
YP_003251757.1	TIGRFAM: phage regulatory protein, Rha family; PFAM: Phage regulatory protein, Rha-like; KEGG: pjd:Pjdr2_1581 phage regulatory protein, Rha family
YP_003251758.1	PFAM: SpoVT/AbrB domain protein; KEGG: drm:Dred_0113 AbrB family transcriptional regulator
YP_003251759.1	KEGG: afl:Aflv_0644 hypothetical protein
YP_003251760.1	KEGG: bcu:BCAH820_4410 hypothetical protein
YP_003251761.1	KEGG: gtn:GTNG_2856 hypothetical protein
YP_003251762.1	TIGRFAM: phage-type endonuclease; PFAM: YqaJ viral recombinase family; KEGG: bcy:Bcer98_2619 YqaJ
YP_003251764.1	TIGRFAM: RecT protein; PFAM: DNA single-strand annealing protein RecT-like; KEGG: bcy:Bcer98_2617 recombination and repair protein RecT
YP_003251765.1	KEGG: bwe:BcerKBAB4_5816 hypothetical protein
YP_003251766.1	KEGG: bld:BLi01321 XkdB
YP_003251767.1	PFAM: IstB domain protein ATP-binding protein; KEGG: bcy:Bcer98_2615 DNA replication protein-like protein
YP_003251769.1	KEGG: gtn:GTNG_2845 hypothetical protein
YP_003251771.1	PFAM: dUTPase; KEGG: gka:GK0515 hypothetical protein
YP_003251772.1	KEGG: hypothetical protein
YP_003251773.1	KEGG: bai:BAA_3833 hypothetical protein
YP_003251774.1	KEGG: structural maintenance of chromosomes protein
YP_003251776.1	KEGG: afl:Aflv_0656 hypothetical protein
YP_003251777.1	TIGRFAM: phage transcriptional regulator, ArpU family; KEGG: gtn:GTNG_2838 hypothetical protein
YP_003251781.1	PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: bcy:Bcer98_2598 HNH endonuclease
YP_003251782.1	TIGRFAM: phage terminase, small subunit, , P27 family; PFAM: terminase small subunit  P27; KEGG: bcb:BCB4264_A2620 phage terminase, small subunit, , P27 family
YP_003251783.1	PFAM: terminase; KEGG: bcb:BCB4264_A2621  phage terminase, large subunit
YP_003251785.1	TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein; KEGG: ctc:CTC02131 portal protein
YP_003251786.1	PFAM: peptidase S14 ClpP; KEGG: cth:Cthe_1720 peptidase S14, ClpP
YP_003251787.1	TIGRFAM: phage major capsid protein, HK97 family; PFAM: major capsid protein HK97; KEGG: ctc:CTC02129 phage protein
YP_003251789.1	TIGRFAM: uncharacterized phage protein ( DNA packaging); KEGG: dhd:Dhaf_1460 uncharacterized phage protein ( DNA packaging)
YP_003251790.1	TIGRFAM: phage head-tail adaptor; PFAM:  head-tail adaptor protein; KEGG: dhd:Dhaf_1461 phage head-tail adaptor
YP_003251791.1	TIGRFAM: phage protein, HK97 gp10 family; PFAM: TP901-1 ORF40 family protein; KEGG: cbf:CLI_3264 HK97 family phage protein
YP_003251792.1	KEGG: cth:Cthe_1714 hypothetical protein
YP_003251793.1	TIGRFAM: phage major tail protein, phi13 family; KEGG: bld:BLi01556 hypothetical protein
YP_003251794.1	KEGG: bld:BLi01558 hypothetical protein
YP_003251796.1	KEGG: gwc:GWCH70_3094 hypothetical protein
YP_003251797.1	KEGG: afl:Aflv_0674 phage-related  tail protein
YP_003251798.1	KEGG: afl:Aflv_0675 phage-related  tail protein
YP_003251799.1	KEGG: gdj:Gdia_2569 hypothetical protein
YP_003251800.1	KEGG: cby:CLM_2504 tail fiber protein
YP_003251801.1	KEGG: cbf:CLI_2395 hypothetical protein
YP_003251802.1	KEGG: afl:Aflv_0677 phage related protein
YP_003251803.1	TIGRFAM: toxin secretion/phage lysis holin; PFAM: Holin toxin secretion/phage lysis; KEGG: bwe:BcerKBAB4_5852 prophage LambdaBa02, holin
YP_003251804.1	PFAM: cell wall hydrolase/autolysin; sporulation domain protein; SMART: cell wall hydrolase/autolysin; KEGG: bha:BH1294 N-acetylmuramoyl-L-alanine amidase (sporulation mother cell wall hydrolase)
YP_003251805.1	KEGG: sha:SH1929 hypothetical protein
YP_003251806.1	PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: afl:Aflv_0682 predicted transcriptional regulator, xre family
YP_003251807.1	KEGG: bcr:BCAH187_A3980 hypothetical protein
YP_003251808.1	KEGG: afl:Aflv_0684 hypothetical protein
YP_003251809.1	PFAM: cell divisionFtsK/SpoIIIE; KEGG: afl:Aflv_0685 FtsK/SpoIIIE family protein (ATPase)
YP_003251810.1	KEGG: lsp:Bsph_3730 phage protein
YP_003251811.1	KEGG: gka:GK2855 nitrate/sulfonate/taurine/bicarbonate ABC transporter (substrate binding protein)
YP_003251812.1	PFAM: BAAT/acyl-CoA thioester hydrolase; KEGG: gka:GK2854 dipeptidyl aminopeptidase/acylaminoacyl-peptidase
YP_003251813.1	PFAM: protein of unknown function DUF2584; KEGG: gka:GK2853 hypothetical protein
YP_003251814.1	KEGG: gka:GK2852 hypothetical protein
YP_003251815.1	PFAM: transposase IS4 family protein; KEGG: gwc:GWCH70_3382 transposase IS4 family protein
YP_003251816.1	PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP
YP_003251817.1	catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase
YP_003251818.1	PFAM: transferase hexapeptide repeat containing protein; KEGG: gka:GK2848 hypothetical protein
YP_003251819.1	PFAM: protein of unknown function DUF2600; KEGG: gka:GK2847 hypothetical protein
YP_003251820.1	PFAM:  rRNA methylase; methyltransferase type 12; KEGG: gka:GK2846 hypothetical protein
YP_003251821.1	PFAM: protein of unknown function DUF2524; KEGG: gka:GK2845 hypothetical protein
YP_003251822.1	KEGG: gka:GK2844 hypothetical protein
YP_003251823.1	PFAM: major facilitator superfamily MFS_1; KEGG: gka:GK2843 multidrug resistance protein
YP_003251824.1	leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase
YP_003251825.1	PFAM: rhodanese; SMART: Rhodanese domain protein; KEGG: gka:GK2841 hypothetical protein
YP_003251826.1	PFAM: helix-turn-helix domain protein; TPR repeat-containing protein; SMART: helix-turn-helix domain protein; Tetratricopeptide repeat; KEGG: gka:GK2839 hypothetical protein
YP_003251828.1	PFAM: peptidase M4 thermolysin; peptidase M4 thermolysin; propeptide peptidase M4 and M36; propeptide PepSY amd peptidase M4; KEGG: btk:BT9727_0509 bacillolysin (thermolysin-like metalloprotease peptidase M4)
YP_003251829.1	KEGG: gtn:GTNG_2740 YteV
YP_003251830.1	PFAM: HI0933 family protein; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; glucose-inhibited division protein A; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gka:GK2836 hypothetical protein
YP_003251831.1	PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; multi antimicrobial extrusion protein MatE; KEGG: gka:GK2835 transporter involved in the export of O-antigen and teichoic acid
YP_003251832.1	KEGG: gka:GK2834 hypothetical protein
YP_003251833.1	PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: gka:GK2833 16S pseudouridylate synthase
YP_003251834.1	PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: gka:GK2832 DeoR family transcriptional regulator
YP_003251835.1	TIGRFAM: dipeptidase; PFAM: peptidase M20; KEGG: gka:GK2831 Xaa-His dipeptidase
YP_003251836.1	PFAM: major facilitator superfamily MFS_1; proton/sugar symporter LacY; KEGG: gka:GK2830 maltose permease
YP_003251837.1	TIGRFAM: 2'-5' RNA ligase; PFAM: phosphoesterase HXTX; KEGG: gka:GK2829 hypothetical protein
YP_003251838.1	KEGG: gka:GK2828 hypothetical protein
YP_003251839.1	KEGG: gka:GK2827 pullulanase; TIGRFAM: pullulanase, type I; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain
YP_003251840.1	PFAM: aminoglycoside phosphotransferase; KEGG: gka:GK2825 hypothetical protein
YP_003251841.1	KEGG: gka:GK2824 hypothetical protein
YP_003251842.1	tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine
YP_003251843.1	PFAM: beta-lactamase; KEGG: gka:GK2822 hypothetical protein
YP_003251844.1	PFAM: propeptide PepSY amd peptidase M4; KEGG: gka:GK2821 hypothetical protein
YP_003251845.1	PFAM: peptidase M42 family protein; KEGG: gka:GK2820 hypothetical protein
YP_003251846.1	pyrophosphatase; has activity against dUTP and dITP; the crystal structure of the Vibrio protein showed similarity to Methanococcus janaschii Mj0226; in Vibrio cholerae this gene is part of the Mba operon that is involved in regulation and maintenance of biofilms; in Escherichia coli overexpression of this gene leads to resistance to an HMP analog
YP_003251848.1	PFAM: protein of unknown function DUF1444; KEGG: gka:GK2818 hypothetical protein
YP_003251849.1	PFAM: t-RNA-binding domain protein; KEGG: gka:GK2817 hypothetical protein
YP_003251850.1	PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; KEGG: gka:GK2816 DNA translocase (stage III sporulation protein E)
YP_003251851.1	Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis
YP_003251852.1	PFAM: protein of unknown function DUF948; KEGG: gka:GK2814 hypothetical protein
YP_003251853.1	KEGG: gka:GK2813 hypothetical protein
YP_003251854.1	KEGG: gka:GK2812 hypothetical protein
YP_003251855.1	catalyzes the formation of 3-deoxy-D-aribino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate and the formation of prephenate from chorismate
YP_003251856.1	KEGG: gka:GK2810 transcriptional regulator involved in carbon catabolite control; TIGRFAM: catabolite control protein A; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI
YP_003251857.1	PFAM: major facilitator superfamily MFS_1; KEGG: bpu:BPUM_1066 major facilitator transporter
YP_003251858.1	KEGG: lpj:JDM1_1744 hypothetical protein
YP_003251859.1	PFAM: transposase IS4 family protein; KEGG: gwc:GWCH70_3382 transposase IS4 family protein
YP_003251860.1	PFAM: transposase IS4 family protein; KEGG: gka:GK2942 hypothetical protein
YP_003251861.1	PFAM: histone deacetylase superfamily; KEGG: gka:GK2809 acetoin utilization protein
YP_003251862.1	PFAM: hypothetical protein; amino acid-binding ACT domain protein; SMART: hypothetical protein; KEGG: gka:GK2808 acetoin utilization protein
YP_003251863.1	KEGG: gka:GK2807 acetoin utilization protein
YP_003251864.1	Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA
YP_003251865.1	PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: gka:GK2805 hypothetical protein
YP_003251866.1	KEGG: gka:GK2804 hypothetical protein
YP_003251867.1	catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr)
YP_003251868.1	primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination
YP_003251869.1	KEGG: gka:GK2801 two-component sensor histidine kinase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein
YP_003251870.1	PFAM: GAF domain protein; SMART: GAF domain protein; KEGG: gka:GK2800 hypothetical protein
YP_003251871.1	catalyzes the formation of L-histidinol from L-histidinol phosphate
YP_003251872.1	acts to negatively regulates ftsZ ring formation by modulating the frequency and position of the ftsZ ring formation
YP_003251873.1	PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: gka:GK2796 cysteine desulfurase
YP_003251874.1	Required for the synthesis of the thiazole moiety
YP_003251875.1	PFAM: small acid-soluble spore protein alpha/beta type; KEGG: gka:GK2794 small acid-soluble spore protein (major alpha-type SASP)
YP_003251876.1	PFAM: AMP-dependent synthetase and ligase; KEGG: gka:GK2793 acetate-CoA ligase
YP_003251877.1	catalyzes the phosphorylation of NAD to NADP
YP_003251878.1	TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; peptidase S14 ClpP; KEGG: gka:GK2791 protease IV (signal peptide peptidase)
YP_003251879.1	PFAM: RDD domain containing protein; KEGG: gka:GK2790 hypothetical protein
YP_003251880.1	KEGG: gka:GK2789 hypothetical protein
YP_003251881.1	TIGRFAM: sporulation protein YtfJ; PFAM: sporulation protein YtfJ; KEGG: gka:GK2788 hypothetical protein
YP_003251882.1	PFAM: redoxin; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; KEGG: gka:GK2787 thiol peroxidase (superoxide-inducible protein 8)
YP_003251883.1	PFAM: N-6 DNA methylase; KEGG: gka:GK2786 hypothetical protein
YP_003251884.1	AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA
YP_003251885.1	KEGG: gka:GK2784 hypothetical protein
YP_003251886.1	PFAM: sterol-binding domain protein; KEGG: gka:GK2783 hypothetical protein
YP_003251887.1	PFAM: AMP-dependent synthetase and ligase; KEGG: gka:GK2782 long-chain fatty-acid-CoA ligase
YP_003251888.1	PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: gka:GK2781 acyl-CoA dehydrogenase
YP_003251889.1	PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: gka:GK2780 acyl-CoA dehydrogenase
YP_003251890.1	PFAM: enoyl-CoA hydratase/isomerase; KEGG: gka:GK2779 enoyl-CoA hydratase/carnithine racemase
YP_003251891.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gka:GK2778 3-ketoacyl-[acyl carrier protein] reductase
YP_003251892.1	KEGG: gka:GK2777 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: thiolase
YP_003251893.1	PFAM: ABC transporter; RIO-like kinase; KEGG: gka:GK2776 ABC transporter
YP_003251894.1	KEGG: gka:GK2775 hypothetical protein
YP_003251895.1	PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: gka:GK2774 alcohol dehydrogenase
YP_003251896.1	KEGG: gka:GK2773 hypothetical protein
YP_003251897.1	PFAM: aldehyde dehydrogenase; KEGG: gka:GK2772 NAD-dependent aldehyde dehydrogenase
YP_003251898.1	Catalyzes the rate-limiting step in dNTP synthesis
YP_003251899.1	KEGG: gka:GK2770 hypothetical protein
YP_003251900.1	KEGG: gka:GK2769 hypothetical protein
YP_003251901.1	KEGG: gka:GK2768 hypothetical protein
YP_003251902.1	PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: gka:GK2767 hypothetical protein
YP_003251903.1	TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; KEGG: gka:GK2766 molybdopterin precursor biosynthesis
YP_003251904.1	PFAM: major facilitator superfamily MFS_1; KEGG: gka:GK2763 hypothetical protein
YP_003251905.1	PFAM: protein of unknown function DUF201; KEGG: gka:GK2762 hypothetical protein
YP_003251906.1	PFAM: protein of unknown function DUF201; KEGG: gka:GK2761 hypothetical protein
YP_003251907.1	PFAM: hypothetical protein; regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: gka:GK2760 hypothetical protein
YP_003251908.1	PFAM: AMP-dependent synthetase and ligase; KEGG: gka:GK2759 acetyl-CoA synthetase (acetate-CoA ligase)
YP_003251910.1	KEGG: gka:GK2758 hypothetical protein
YP_003251911.1	catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming
YP_003251912.1	catalyzes the formation of arginine from (N-L-arginino)succinate
YP_003251913.1	PFAM: UspA domain protein; KEGG: gka:GK2755 hypothetical protein
YP_003251914.1	KEGG: gka:GK2754 hypothetical protein
YP_003251915.1	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
YP_003251916.1	KEGG: gka:GK2752 alanine dehydrogenase; TIGRFAM: alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein; shikimate/quinate 5-dehydrogenase
YP_003251917.1	PFAM: peptidase M24; creatinase; KEGG: gka:GK2751 Xaa-Pro dipeptidase
YP_003251918.1	catalyzes the opening and hydrolysis of the beta-lactam ring of beta-lactam antibiotics such as penicillins and cephalosporins
YP_003251919.1	PFAM: DRTGG domain protein; hypothetical protein; thioesterase superfamily protein; regulatory protein GntR HTH; SMART: hypothetical protein; KEGG: gka:GK2749 hypothetical protein
YP_003251920.1	KEGG: gka:GK2748 hypothetical protein
YP_003251921.1	PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: gka:GK2747 hypothetical protein
YP_003251922.1	KEGG: gka:GK2746 hypothetical protein
YP_003251923.1	KEGG: gtn:GTNG_2669 hypothetical protein
YP_003251924.1	KEGG: gka:GK2744 DNA-directed DNA polymerase III alpha subunit; TIGRFAM: DNA polymerase III subunit alpha; PFAM: DNA polymerase III subunit alpha; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: phosphoesterase PHP domain protein
YP_003251925.1	PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: gka:GK2743 transcriptional regulator
YP_003251926.1	catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits
YP_003251927.1	catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein
YP_003251928.1	catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis
YP_003251929.1	catalyzes the formation of phosphoenolpyruvate from pyruvate
YP_003251930.1	TIGRFAM: sporulation integral membrane protein YtvI; PFAM: protein of unknown function UPF0118; KEGG: gka:GK2738 hypothetical protein
YP_003251931.1	PFAM: protein of unknown function DUF441; KEGG: gka:GK2737 hypothetical protein
YP_003251932.1	catalyzes the formation of citrate from acetyl-CoA and oxaloacetate
YP_003251933.1	Converts isocitrate to alpha ketoglutarate
YP_003251934.1	Catalyzes the reversible oxidation of malate to oxaloacetate
YP_003251935.1	PFAM: MaoC domain protein dehydratase; KEGG: gka:GK2733 hypothetical protein
YP_003251936.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: gka:GK2732 two-component response regulator (phosphate regulation)
YP_003251937.1	KEGG: gka:GK2731 two-component sensor histidine kinase (phosphate regulation); TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; hypothetical protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein
YP_003251938.1	has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair
YP_003251939.1	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases
YP_003251940.1	catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis
YP_003251941.1	NADP-dependent; catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; active during gluconeogenesis
YP_003251942.1	Decarboxylation of S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine
YP_003251943.1	KEGG: gka:GK2724 hypothetical protein
YP_003251944.1	PFAM: ATP-cone domain protein; KEGG: gtn:GTNG_2647  regulatory protein
YP_003251945.1	PFAM: replication initiation and membrane attachment family protein; KEGG: gka:GK2722 chromosome replication initiation/membrane attachment protein
YP_003251946.1	Primosomal protein that may act to load helicase DnaC during DNA replication
YP_003251947.1	TIGRFAM: sporulation protein YtxC; PFAM: sporulation protein YtxC; KEGG: gka:GK2720 hypothetical protein
YP_003251948.1	catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr)
YP_003251949.1	TIGRFAM: translation initiation factor IF-3; PFAM: translation initiation factor 3-like; KEGG: gka:GK2718 translation initiation factor IF-3
YP_003251950.1	TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35; KEGG: gka:GK2717 50S ribosomal protein L35
YP_003251951.1	binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit
YP_003251952.1	PFAM: protein of unknown function DUF1294; KEGG: gka:GK2715 hypothetical protein
YP_003251953.1	PFAM: dUTPase; KEGG: gka:GK2714 hypothetical protein
YP_003251954.1	PFAM: peptidase M42 family protein; peptidase M18 aminopeptidase I; KEGG: gka:GK2713 hypothetical protein
YP_003251955.1	KEGG: eat:EAT1b_0717 hypothetical protein
YP_003251956.1	TIGRFAM: small, acid-soluble spore protein I; KEGG: gka:GK2712 small acid-soluble spore protein SspI
YP_003251957.1	TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family; PFAM: nucleotidyltransferase substrate binding protein HI0074; DNA polymerase III subunit beta; KEGG: gka:GK2711 hypothetical protein
YP_003251958.1	KEGG: gka:GK2710 peptide methionine sulfoxide reductase; TIGRFAM: peptide methionine sulfoxide reductase; PFAM: methionine sulfoxide reductase A
YP_003251959.1	PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: gka:GK2709 rRNA methylase
YP_003251960.1	KEGG: gka:GK2708 hypothetical protein
YP_003251961.1	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily
YP_003251962.1	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily
YP_003251963.1	TIGRFAM: DNA binding domain protein, excisionase family; KEGG: gka:GK2705 molybdenum-binding protein
YP_003251964.1	TIGRFAM: molybdenum ABC transporter periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: gka:GK2704 molybdenum ABC transporter (molybdate-binding protein)
YP_003251965.1	TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein; KEGG: gka:GK2703 hypothetical protein
YP_003251966.1	TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein; KEGG: gka:GK2702 hypothetical protein
YP_003251967.1	KEGG: gka:GK2701 alkaline phosphatase; PFAM: alkaline phosphatase; SMART: alkaline phosphatase
YP_003251968.1	PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: gka:GK2700 MarR family transcriptional regulator
YP_003251969.1	PFAM: MMPL domain protein; KEGG: gka:GK2699 hypothetical protein
YP_003251970.1	PFAM: ThiJ/PfpI domain protein; KEGG: gka:GK2698 hypothetical protein
YP_003251971.1	An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids
YP_003251972.1	PFAM: protein of unknown function DUF710; KEGG: gka:GK2696 hypothetical protein
YP_003251973.1	PFAM: colicin V production protein; KEGG: gka:GK2695 hypothetical protein
YP_003251974.1	PFAM: PHP domain protein; SMART: DNA polymerase X; phosphoesterase PHP domain protein; Helix-hairpin-helix DNA-binding class 1; KEGG: gka:GK2694 hypothetical protein
YP_003251975.1	MutS2; MutS-II; involved in blocking homologous and homeologous recombination; has ATPase activity stimulated by recombination intermediates; inhibits DNA strand exchange
YP_003251976.1	PFAM: protein of unknown function DUF350; KEGG: gka:GK2692 hypothetical protein
YP_003251977.1	KEGG: gka:GK2691 hypothetical protein
YP_003251978.1	PFAM: AMP-dependent synthetase and ligase; KEGG: gka:GK2690 long chain acyl-CoA synthetase
YP_003251979.1	PFAM: Tetracycline transcriptional regulator YsiA domain protein; regulatory protein TetR; KEGG: gka:GK2689 TetR/AcrR family transcriptional regulator
YP_003251980.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
YP_003251981.1	PFAM: electron transfer flavoprotein alpha/beta-subunit; KEGG: gka:GK2687 electron transfer flavoprotein beta subunit
YP_003251982.1	PFAM: electron transfer flavoprotein subunit alpha ; electron transfer flavoprotein alpha/beta-subunit; KEGG: gka:GK2686 electron transfer flavoprotein subunit alpha
YP_003251983.1	TIGRFAM: thioredoxin; PFAM: thioredoxin domain; KEGG: gka:GK2685 thioredoxin (TRX)
YP_003251984.1	KEGG: gka:GK2684 hypothetical protein
YP_003251985.1	PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: gka:GK2682 nucleotide sugar epimerase
YP_003251986.1	PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; sulfatase; metalloenzyme domain protein; KEGG: gka:GK2680 hypothetical protein
YP_003251987.1	PFAM: glycosyl transferase family 2; KEGG: gka:GK2679 dolichyl-phosphate mannose synthase
YP_003251988.1	KEGG: gka:GK2678 hypothetical protein
YP_003251989.1	PFAM: iron permease FTR1; KEGG: gka:GK2677 hypothetical protein
YP_003251990.1	KEGG: gka:GK2676 hypothetical protein
YP_003251991.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
YP_003251992.1	PFAM: protein of unknown function DUF2507; KEGG: gka:GK2674 hypothetical protein
YP_003251993.1	TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; PFAM: fumarate reductase respiratory complex; KEGG: gka:GK2673 succinate dehydrogenase (cytochrome b558 subunit)
YP_003251994.1	part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol
YP_003251995.1	part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase
YP_003251996.1	PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; KEGG: gtn:GTNG_2598 germination protein GerE
YP_003251997.1	PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: gka:GK2669 MarR family transcriptional regulator
YP_003251998.1	converts L-glutamate to D-glutamate, a component of peptidoglycan
YP_003251999.1	PFAM: Lipoprotein LpqB, GerMN domain; KEGG: gka:GK2667 germination (cortex hydrolysis) and sporulation (stage II, multiple polar septa)
YP_003252000.1	RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs
YP_003252001.1	hydrolyzes non-standard nucleotides such as xanthine and inosine
YP_003252002.1	TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; KEGG: gka:GK2664 hypothetical protein
YP_003252003.1	catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids
YP_003252005.1	catalyzes the formation of 2-acetolactate from pyruvate; also known as acetolactate synthase large subunit
YP_003252006.1	with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit
YP_003252007.1	catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis
YP_003252008.1	catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis
YP_003252009.1	catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis
YP_003252010.1	dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate
YP_003252011.1	catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D
YP_003252012.1	KEGG: gka:GK2654 hypothetical protein
YP_003252013.1	Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer
YP_003252014.1	binds and unfolds substrates as part of the ClpXP protease
YP_003252015.1	KEGG: gka:GK2651 ATP-dependent protease; TIGRFAM: ATP-dependent protease LonB; PFAM: ATPase AAA; peptidase S16; ATPase associated with various cellular activities AAA_5; magnesium chelatase ChlI subunit; SMART: ATPase AAA
YP_003252016.1	KEGG: gka:GK2650 ATP-dependent Lon protease; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16; ATPase AAA central domain protein; ATPase associated with various cellular activities AAA_5; SMART: peptidase S16; ATPase AAA
YP_003252017.1	binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential
YP_003252018.1	KEGG: gka:GK2648 hypothetical protein
YP_003252019.1	catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins
YP_003252020.1	PFAM: cytochrome C assembly protein; KEGG: gka:GK2646 negative effector of the concentration of HemA
YP_003252021.1	transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis
YP_003252022.1	PFAM: uroporphyrinogen III synthase HEM4; KEGG: gka:GK2644 uroporphyrinogen III cosynthase
YP_003252023.1	catalyzes the formation of porphobilinogen from 5-aminolevulinate
YP_003252024.1	Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway
YP_003252025.1	KEGG: gka:GK2641 hypothetical protein; TIGRFAM: stage VI sporulation protein D; PFAM: peptidoglycan-binding lysin domain; SMART: peptidoglycan-binding LysM
YP_003252026.1	TIGRFAM: spore coat protein YsxE; KEGG: gka:GK2640 hypothetical protein
YP_003252027.1	KEGG: gka:GK2639 hypothetical protein
YP_003252028.1	valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain
YP_003252029.1	TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: gka:GK2637 folyl-polyglutamate synthetase
YP_003252030.1	PFAM: von Willebrand factor A; Ig domain protein group 2 domain protein; SMART: von Willebrand factor A; Ig domain protein group 2 domain protein; KEGG: gka:GK2636 hypothetical protein
YP_003252031.1	KEGG: gka:GK2635 hypothetical protein
YP_003252032.1	KEGG: gtn:GTNG_2563 hypothetical protein
YP_003252033.1	KEGG: gka:GK2633 hypothetical protein
YP_003252034.1	KEGG: gtn:GTNG_2561 hypothetical protein
YP_003252035.1	KEGG: gka:GK2631 hypothetical protein
YP_003252036.1	KEGG: gtn:GTNG_2560 hypothetical protein
YP_003252037.1	PFAM: type II secretion system protein E; general secretory system II protein E domain protein; SMART: ATPase AAA; KEGG: gka:GK2629 ATPase involved in pili biogenesis
YP_003252038.1	KEGG: gtn:GTNG_2558 pili biogenesis protein PilT-like ATPase; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: ATPase AAA
YP_003252039.1	PFAM: type II secretion system F domain; KEGG: gtn:GTNG_2557 PilC II secretion system protein
YP_003252040.1	KEGG: afl:Aflv_0627 type II secretory pathway pseudopilin PulG
YP_003252041.1	PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV; KEGG: gka:GK2625 signal peptidase (late competence protein)
YP_003252042.1	KEGG: gtn:GTNG_2554 hypothetical protein
YP_003252043.1	PFAM: fimbrial assembly family protein; KEGG: gtn:GTNG_2553 hypothetical protein
YP_003252044.1	KEGG: gka:GK2622 hypothetical protein
YP_003252045.1	KEGG: gka:GK2621 hypothetical protein
YP_003252046.1	KEGG: gka:GK2620 hypothetical protein
YP_003252047.1	Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell
YP_003252048.1	Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase
YP_003252049.1	functions in MreBCD complex in some organisms
YP_003252050.1	in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall
YP_003252051.1	TIGRFAM: rod shape-determining protein MreD; PFAM: Rod shape-determining protein MreD; KEGG: gka:GK2615 cell-shape determining protein
YP_003252052.1	blocks the formation of polar Z-ring septums
YP_003252053.1	TIGRFAM: septum site-determining protein MinD; PFAM: cobyrinic acid ac-diamide synthase; KEGG: gka:GK2613 ATPase involved in chromosome partitioning
YP_003252055.1	PFAM: peptidase M23; KEGG: gka:GK2612 inhibitor of SpoIVFB (stage IV sporulation protein FA)
YP_003252056.1	PFAM: peptidase M50; KEGG: gka:GK2611 protease (stage IV sporulation protein FB)
YP_003252057.1	TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21; KEGG: gka:GK2610 50S ribosomal protein L21
YP_003252058.1	PFAM: protein of unknown function DUF464; KEGG: gka:GK2609 hypothetical protein
YP_003252059.1	involved in the peptidyltransferase reaction during translation
YP_003252060.1	KEGG: gka:GK2607 stage 0 sporulation protein B (sporulation initiation phosphoprotein)
YP_003252061.1	essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication
YP_003252062.1	PFAM: amino acid-binding ACT domain protein; KEGG: gka:GK2605 hypothetical protein
YP_003252063.1	catalyzes the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis
YP_003252064.1	PFAM: 3H domain protein; Helix-turn-helix type 11 domain protein; KEGG: gka:GK2603 hypothetical protein
YP_003252065.1	catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis
YP_003252066.1	catalyzes the formation of oxaloacetate from L-aspartate
YP_003252067.1	catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide
YP_003252068.1	3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate
YP_003252069.1	KEGG: gka:GK2598 hypothetical protein; TIGRFAM: spore coat assembly protein SafA; PFAM: peptidoglycan-binding lysin domain; SMART: peptidoglycan-binding LysM
YP_003252070.1	PFAM: aminoglycoside phosphotransferase; KEGG: gka:GK2597 hypothetical protein
YP_003252071.1	TIGRFAM: NAD+ synthetase; PFAM: NAD synthase; Queuosine synthesis-like; KEGG: gka:GK2596 NH(3)-dependent NAD+ synthetase
YP_003252072.1	PFAM: sporulation lipoprotein YhcN/YlaJ-like; KEGG: gka:GK2595 hypothetical protein
YP_003252073.1	PFAM: protein of unknown function DUF28; KEGG: gka:GK2594 hypothetical protein
YP_003252074.1	PFAM: Domain of unkown function DUF1901; Bypass-of-forespore C; KEGG: gka:GK2593 bypass-of-forespore protein C (forespore regulator of the sigma-K checkpoint)
YP_003252075.1	plays an essential role in ATP-dependent branch migration of the Holliday junction
YP_003252076.1	promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration
YP_003252077.1	KEGG: gka:GK2590 hypothetical protein
YP_003252078.1	Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step
YP_003252079.1	Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr)
YP_003252080.1	member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex
YP_003252081.1	KEGG: gka:GK2585 hypothetical protein
YP_003252082.1	TIGRFAM: stage V sporulation protein B; PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; multi antimicrobial extrusion protein MatE; KEGG: gka:GK2584 stage V sporulation protein B (spore cortex synthesis)
YP_003252083.1	KEGG: gka:GK2583 hypothetical protein
YP_003252084.1	part of the preprotein secretory system; forms a complex with protein YajC; SecDFyajC stimulates the proton motive force-driven protein translocation, seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF
YP_003252085.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: gka:GK2581 cation efflux transporter (cadmium/zinc/cobalt)
YP_003252086.1	TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: Single-stranded-DNA-specific exonuclease RecJ-like; phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: gka:GK2580 single-strand DNA-specific exonuclease
YP_003252087.1	catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis
YP_003252088.1	KEGG: gka:GK2578 GTP pyrophosphokinase (ppGpp synthetase); TIGRFAM: RelA/SpoT family protein; PFAM: RelA/SpoT domain protein; TGS domain protein; amino acid-binding ACT domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_003252089.1	hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); defense mechanism against a harmful effect of D-tyrosine
YP_003252090.1	KEGG: gka:GK2576 hypothetical protein
YP_003252091.1	KEGG: gka:GK2575 peroxiredoxin; TIGRFAM: peroxiredoxin; PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; redoxin
YP_003252092.1	TIGRFAM: alkyl hydroperoxide reductase, F subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gka:GK2574 NADH-peroxiredoxin reductase
YP_003252093.1	catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG
YP_003252094.1	catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes
YP_003252095.1	PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: gka:GK2571 hypothetical protein
YP_003252096.1	TIGRFAM: transcription factor, RsfA family; KEGG: gka:GK2570 transcriptional activator
YP_003252097.1	PFAM: acriflavin resistance protein; KEGG: gka:GK2569 hypothetical protein
YP_003252098.1	PFAM: regulatory protein TetR; KEGG: gka:GK2568 TetR/AcrR family transcriptional regulator
YP_003252099.1	PFAM: ATPase AAA; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: gka:GK2567 recombination factor protein RarA
YP_003252100.1	TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: gka:GK2565 hypothetical protein
YP_003252101.1	PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: gka:GK2564 iron-sulfur cofactor synthesis
YP_003252102.1	catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs
YP_003252103.1	PFAM: hypothetical protein; TPR repeat-containing protein; SMART: Tetratricopeptide repeat; KEGG: gka:GK2562 hypothetical protein
YP_003252104.1	KEGG: gka:GK2561 ATP-dependent exonuclease V; TIGRFAM: helicase, RecD/TraA family; SMART: ATPase AAA
YP_003252105.1	PFAM: PRC-barrel domain protein; KEGG: gka:GK2560 hypothetical protein
YP_003252106.1	KEGG: gtn:GTNG_2492 hypothetical protein
YP_003252107.1	KEGG: gwc:GWCH70_2492 hypothetical protein
YP_003252108.1	PFAM: protein of unknown function UPF0118; KEGG: gka:GK2557 hypothetical protein
YP_003252110.1	Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_003252111.1	PFAM: protein of unknown function DUF965; KEGG: gka:GK2555 hypothetical protein
YP_003252112.1	PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; KEGG: gka:GK2554 hypothetical protein
YP_003252113.1	PFAM: protein of unknown function DUF1292; KEGG: gka:GK2553 hypothetical protein
YP_003252114.1	PFAM: aminodeoxychorismate lyase; KEGG: gka:GK2552 hypothetical protein
YP_003252115.1	PFAM: O-methyltransferase family 3; KEGG: gka:GK2551 caffeoyl-CoA O-methyltransferase
YP_003252116.1	PFAM: peptidase U32; KEGG: gka:GK2550 protease
YP_003252117.1	PFAM: peptidase U32; KEGG: gka:GK2549 protease
YP_003252118.1	functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor
YP_003252119.1	necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
YP_003252120.1	PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: gka:GK2546 hypothetical protein
YP_003252121.1	PFAM: protein of unknown function DUF1510; KEGG: gka:GK2545 hypothetical protein
YP_003252122.1	PFAM: protein of unknown function DUF2536; KEGG: gka:GK2544 hypothetical protein
YP_003252123.1	PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: gka:GK2543 S-adenosylmethionine(SAM)-dependent methyltransferase
YP_003252124.1	enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine
YP_003252125.1	PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: gka:GK2541 cysteine synthase
YP_003252126.1	catalyzes the formation of L-homocysteine from cystathionine
YP_003252127.1	KEGG: gka:GK2539 hypothetical protein
YP_003252128.1	KEGG: gka:GK2538 hypothetical protein
YP_003252129.1	sigma-28; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the mother cell after engulfment
YP_003252130.1	PFAM: sodium:dicarboxylate symporter; KEGG: gka:GK2534 proton/sodium:glutamate symporter
YP_003252131.1	PFAM: SNARE associated Golgi protein; KEGG: gka:GK2533 hypothetical protein
YP_003252132.1	TIGRFAM: sporulation integral membrane protein YtvI; PFAM: protein of unknown function UPF0118; KEGG: gka:GK2532 hypothetical protein
YP_003252133.1	with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine
YP_003252134.1	With Mot B forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine.
YP_003252135.1	TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: gka:GK2529 phosphatidylserine synthase
YP_003252136.1	catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine
YP_003252137.1	PFAM: sporulation inhibitor A; KEGG: gtn:GTNG_2463 hypothetical protein
YP_003252138.1	TIGRFAM: HAD superfamily (subfamily IIIA) phosphatase, TIGR01668; HAD-superfamily hydrolase, subfamily IA, variant 1; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: protein of unknown function DUF2010; KEGG: gka:GK2526 hypothetical protein
YP_003252139.1	in Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNsubunit alpha biogenesis
YP_003252140.1	AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate
YP_003252141.1	PFAM: protein of unknown function UPF0044; KEGG: gka:GK2523 hypothetical protein
YP_003252142.1	transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria
YP_003252143.1	KEGG: gka:GK2521 hypothetical protein; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_003252144.1	TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: gka:GK2520 hypothetical protein
YP_003252145.1	PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: gka:GK2519 hypothetical protein
YP_003252146.1	may be involved in regulation of competence genes
YP_003252147.1	KEGG: gka:GK2517 late competence protein (DNA binding and uptake); TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; PFAM: Soluble ligand binding domain; helix-hairpin-helix motif; SMART: DNA-binding protein
YP_003252148.1	TIGRFAM: ComE operon protein 2; PFAM: CMP/dCMP deaminase zinc-binding; KEGG: gka:GK2516 late competence protein (DNA binding and uptake)
YP_003252149.1	TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; beta-lactamase; KEGG: gka:GK2515 late competence protein (DNA uptake)
YP_003252150.1	KEGG: gka:GK2514 hypothetical protein
YP_003252151.1	required for the assembly and function of the DNAX complex which is required for the assembly of the subunit beta onto primed DNA
YP_003252152.1	binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase
YP_003252153.1	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
YP_003252154.1	TIGRFAM: stage II sporulation protein P; PFAM: stage II sporulation P family protein; KEGG: gka:GK2510 stage II sporulation protein P (septal wall dissolution protein)
YP_003252155.1	KEGG: gka:GK2509 hypothetical protein
YP_003252156.1	binds to the ribosome on the universally-conserved alpha-sarcin loop
YP_003252157.1	catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III
YP_003252158.1	negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
YP_003252159.1	with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor
YP_003252160.1	heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria
YP_003252161.1	chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion
YP_003252162.1	methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype
YP_003252163.1	in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase
YP_003252164.1	KEGG: gka:GK2500 hypothetical protein; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: protein of unknown function UPF0004 ; radical SAM protein; deoxyribonuclease/rho motif-related TRAM; SMART: Elongator protein 3/MiaB/NifB
YP_003252165.1	catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate
YP_003252166.1	TIGRFAM: Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; KEGG: gka:GK2498 Na+:phosphate symporter
YP_003252167.1	a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA
YP_003252168.1	PFAM: protein of unknown function YOR215C, mitochondrial; KEGG: gka:GK2496 hypothetical protein
YP_003252169.1	TIGRFAM: sporulation protein YqfC; PFAM: protein of unknown function DUF1429; KEGG: gka:GK2495 hypothetical protein
YP_003252170.1	TIGRFAM: sporulation protein YqfD; PFAM:  stage IV sporulation YqfD; KEGG: gka:GK2494 stage IV sporulation protein
YP_003252171.1	PFAM: PhoH family protein; K Homology, type 1, subgroup; KEGG: gka:GK2493 phosphate starvation-induced protein
YP_003252172.1	KEGG: gka:GK2492 hypothetical protein; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase 7TM extracellular region; metal-dependent phosphohydrolase 7TM intracellular region; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_003252173.1	PFAM: protein of unknown function UPF0054; KEGG: gka:GK2491  metalloprotease
YP_003252174.1	PFAM: diacylglycerol kinase; KEGG: gka:GK2490 diacylglycerol kinase
YP_003252175.1	TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; KEGG: gka:GK2489 cytidine deaminase
YP_003252176.1	TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; Miro domain protein; KEGG: gka:GK2488 GTP-binding protein
YP_003252177.1	KEGG: gka:GK2487 hypothetical protein
YP_003252178.1	involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA
YP_003252179.1	PFAM: hypothetical protein; Helix-turn-helix type 11 domain protein; SMART: hypothetical protein; KEGG: gka:GK2485 hypothetical protein
YP_003252180.1	PFAM: protein of unknown function DUF299; KEGG: gka:GK2484 hypothetical protein
YP_003252181.1	synthesizes RNA primers at the replication forks
YP_003252182.1	PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: gwc:GWCH70_2089 transposase IS116/IS110/IS902 family protein
YP_003252183.1	KEGG: gka:GK0180 hypothetical protein
YP_003252184.1	SMART: helix-turn-helix domain protein; KEGG: gtn:GTNG_0162 DNA-binding protein
YP_003252185.1	PFAM: protein of unknown function DUF817; KEGG: gka:GK0182 hypothetical protein
YP_003252186.1	KEGG: gka:GK0183 hypothetical protein
YP_003252187.1	PFAM: TatD-related deoxyribonuclease; KEGG: gka:GK0184 deoxyribonuclease
YP_003252188.1	KEGG: gka:GK0185 NifA/NtrC family transcriptional regulator; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; PAS fold-4 domain protein; PAS fold domain protein; SMART: ATPase AAA
YP_003252189.1	PFAM: amino acid permease-associated region; KEGG: gka:GK0186 amino acid permease
YP_003252190.1	catalyzes the conversion of 1-proline-5-carboxylate dehydrogenase to L-glutamate
YP_003252191.1	TIGRFAM: ornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: gka:GK0188 ornithine--oxo-acid transaminase
YP_003252192.1	PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: gka:GK0189 NAD-specific glutamate dehydrogenase (NAD-GDH)
YP_003252193.1	PFAM: SNARE associated Golgi protein; KEGG: gka:GK0190 alkaline phosphatase
YP_003252194.1	PFAM: transporter permease; KEGG: gtn:GTNG_0172 iron compound ABC transporter (permease)
YP_003252195.1	PFAM: transporter permease; KEGG: gka:GK0192 ferrichrome ABC transporter (permease)
YP_003252196.1	PFAM: periplasmic binding protein; KEGG: gka:GK0193 ferrichrome ABC transporter (ferrichrome-binding protein)
YP_003252197.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK0194 ferrichrome ABC transporter ATP-binding protein
YP_003252198.1	KEGG: gka:GK0196 sigma-L-dependent transcriptional regulator; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; hypothetical protein; hypothetical protein; PAS fold domain protein; ATPase associated with various cellular activities AAA_5; SMART: PAS domain containing protein; ATPase AAA
YP_003252199.1	PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: gka:GK0197 acyl-CoA dehydrogenase
YP_003252200.1	KEGG: gka:GK0198 hypothetical protein
YP_003252201.1	PFAM: aldehyde dehydrogenase; KEGG: gka:GK0199 aldehyde dehydrogenase
YP_003252202.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: gka:GK0200 alcohol dehydrogenase
YP_003252203.1	PFAM: DoxX family protein; KEGG: gka:GK0201 hypothetical protein
YP_003252204.1	PFAM: DSBA oxidoreductase; KEGG: gka:GK0202 protein-disulfide isomerase
YP_003252205.1	PFAM: DinB family protein; KEGG: gka:GK0203 hypothetical protein
YP_003252206.1	PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: gka:GK0205 two-component response regulator
YP_003252207.1	PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: gka:GK0206 hypothetical protein
YP_003252208.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bwe:BcerKBAB4_1658 ABC transporter
YP_003252209.1	PFAM: ABC transporter; KEGG: bca:BCE_1866 ABC transporter permease
YP_003252210.1	PFAM: ABC transporter; KEGG: gka:GK0208 ABC transporter ATP-binding protein
YP_003252211.1	PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; KEGG: gka:GK0209 N-acetylmuramoyl-L-alanine amidase
YP_003252212.1	PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: gka:GK0210 intracellular alkaline serine protease
YP_003252213.1	PFAM: sulfatase; KEGG: gka:GK0211 sulfatase
YP_003252214.1	KEGG: gka:GK0212 trk family K(+) transporter; TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter
YP_003252215.1	KEGG: gka:GK0213 hypothetical protein
YP_003252216.1	TIGRFAM: sporulation protein YtaF; PFAM: protein of unknown function DUF204; KEGG: gka:GK0214 hypothetical protein
YP_003252217.1	PFAM: SpoOM family protein; KEGG: gka:GK0215 sporulation-control protein
YP_003252218.1	PFAM: Coat F domain protein; KEGG: gka:GK0216 spore coat protein F
YP_003252219.1	PFAM: ROK family protein; KEGG: gka:GK0217 transcriptional regulator
YP_003252220.1	BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell
YP_003252222.1	KEGG: bli:BL01816 hypothetical protein
YP_003252223.1	KEGG: gka:GK1903 transposase
YP_003252224.1	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis
YP_003252225.1	PFAM: polysaccharide deacetylase; KEGG: gka:GK0220 chitooligosaccharide deacetylase
YP_003252226.1	PFAM: SNARE associated Golgi protein; KEGG: gka:GK0221 alkaline phosphatase
YP_003252227.1	PFAM: monogalactosyldiacylglycerol synthase; KEGG: gka:GK0222 hypothetical protein
YP_003252228.1	D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli
YP_003252229.1	TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: gka:GK0224 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D -alanyl ligase
YP_003252230.1	PFAM: alpha/beta hydrolase fold; KEGG: gka:GK0225 carboxylesterase precursor
YP_003252231.1	PFAM: DEAD/DEAH box helicase; helicase domain protein; SMART: DEAD-like helicase ; helicase; KEGG: gka:GK0226 ATP-dependent RNA helicase
YP_003252232.1	PFAM: rhomboid family protein; KEGG: gka:GK0227 hypothetical protein
YP_003252233.1	Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids
YP_003252234.1	KEGG: gka:GK0229 hypothetical protein
YP_003252235.1	KEGG: gka:GK0231 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein
YP_003252236.1	KEGG: gka:GK0232 hypothetical protein
YP_003252237.1	PFAM: PemK family protein; KEGG: afl:Aflv_0199 toxin-antitoxin addiction module toxin component MazF (an endoRNAse)
YP_003252238.1	PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: gka:GK0234 hypothetical protein
YP_003252239.1	KEGG: gwc:GWCH70_0214 hypothetical protein
YP_003252240.1	PFAM: protein of unknown function DUF335 SprT; SMART: protein of unknown function SprT; KEGG: gka:GK0235 hypothetical protein
YP_003252241.1	PFAM: protein of unknown function UPF0079; KEGG: gka:GK0236 hypothetical protein
YP_003252242.1	PFAM: peptidase M22 glycoprotease; KEGG: gka:GK0237 glycoprotein endopeptidase
YP_003252243.1	TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: gka:GK0238 ribosomal protein (S18)-alanine acetyltransferase
YP_003252244.1	in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity
YP_003252245.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK0240 ABC transporter ATP-binding protein
YP_003252246.1	MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis
YP_003252247.1	modulates transcription in response to the NADH/NAD(+) redox state
YP_003252248.1	TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: gka:GK0243 hypothetical protein
YP_003252249.1	TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: gka:GK0244 hypothetical protein
YP_003252251.1	KEGG: gka:GK0245 hypothetical protein
YP_003252252.1	PFAM: hypothetical protein; KEGG: gka:GK0246 hypothetical protein
YP_003252253.1	10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring
YP_003252254.1	60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth
YP_003252255.1	PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: gwc:GWCH70_2089 transposase IS116/IS110/IS902 family protein
YP_003252256.1	PFAM: xanthine/uracil/vitamin C permease; KEGG: gka:GK0255 hypothetical protein
YP_003252257.1	contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway
YP_003252258.1	PFAM: transglutaminase; SMART: transglutaminase; KEGG: gka:GK0253 hypothetical protein
YP_003252259.1	PFAM: protein of unknown function DUF58; KEGG: gka:GK0252 hypothetical protein
YP_003252260.1	PFAM: ATPase associated with various cellular activities AAA_3; ATPase AAA; KEGG: gka:GK0251 methanol dehydrogenase regulatory protein (MoxR protein)
YP_003252261.1	class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle
YP_003252262.1	PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: gwc:GWCH70_2089 transposase IS116/IS110/IS902 family protein
YP_003252263.1	KEGG: gwc:GWCH70_0173 hypothetical protein
YP_003252266.1	KEGG: gka:GK0256 small heat shock protein
YP_003252267.1	KEGG: gka:GK0257 phosphoribosylaminoimidazole carboxylase catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
YP_003252268.1	With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway
YP_003252269.1	Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide
YP_003252270.1	catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase
YP_003252271.1	With PurL and PurQ catalyzes the conversion of formylglycinamide ribonucleotide, ATP, and glutamine to formylglycinamidine ribonucleotide, ADP, and glutamate in the fourth step of the purine biosynthetic pathway
YP_003252272.1	catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis
YP_003252273.1	catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis
YP_003252274.1	Catalyzes first step of the de novo purine nucleotide biosynthetic pathway
YP_003252275.1	catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis
YP_003252276.1	glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate
YP_003252277.1	involved in de novo purine biosynthesis
YP_003252278.1	catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis
YP_003252279.1	KEGG: gka:GK0270 hypothetical protein
YP_003252280.1	PFAM: amidohydrolase; KEGG: gka:GK0271 adenine deaminase
YP_003252281.1	KEGG: gka:GK0272 hypothetical protein
YP_003252282.1	TIGRFAM: TrpR like protein, YerC/YecD; PFAM: Trp repressor; KEGG: gka:GK0273 hypothetical protein
YP_003252283.1	PcrB-like protein; GGGP synthase; member of prenyltransferases that transfer isoprenoid groups to nonisoprenoid acceptors; functions in form GGGP from glycerol-1-phosphate (G-1-P) and geranylgeranyl pyrophosphate (GGPP); important in lipid metabolism and especially important as the ether linkages in archaea are different than those in bacteria; GGGP synthase lies at the branch point for membrane lipid biosynthesis; cytosolic; T acidophilum protein acts as a homodimer while M thermoautotrophicum protein has been reported to function as a pentamer
YP_003252284.1	TIGRFAM: ATP-dependent DNA helicase PcrA; PFAM: UvrD/REP helicase; KEGG: gka:GK0275 ATP-dependent DNA helicase
YP_003252285.1	this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB
YP_003252286.1	PFAM: CamS sex pheromone cAM373 family protein; KEGG: gka:GK0277 hypothetical protein
YP_003252287.1	PFAM: conserved hypothetical protein; KEGG: gka:GK0278 hypothetical protein
YP_003252288.1	PFAM: amine oxidase; KEGG: gtn:GTNG_0259 amine oxidase flavin-containing
YP_003252289.1	KEGG: gka:GK0279 hypothetical protein
YP_003252290.1	KEGG: gka:GK0280 hypothetical protein
YP_003252291.1	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain
YP_003252292.1	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA
YP_003252293.1	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA
YP_003252294.1	catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol
YP_003252295.1	KEGG: gka:GK0286 lantibiotic precursor
YP_003252296.1	KEGG: gka:GK0288 NADH dehydrogenase (ubiquinone) chain 4
YP_003252297.1	KEGG: gka:GK0289 hypothetical protein
YP_003252298.1	KEGG: gka:GK0290 hypothetical protein
YP_003252299.1	PFAM: transposase IS4 family protein; KEGG: gka:GK2942 hypothetical protein
YP_003252300.1	KEGG: gka:GK0290 hypothetical protein
YP_003252301.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK0291 ABC transporter ATP-binding protein
YP_003252302.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: gka:GK0306 lantibiotic biosynthesis protein (response regulator)
YP_003252303.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gka:GK0307 lantibiotic biosynthesis protein (sensory transduction protein kinase)
YP_003252304.1	KEGG: gtn:GTNG_0271 SpaI
YP_003252305.1	KEGG: gka:GK0310 lantibiotic ABC transporter (permease)
YP_003252306.1	KEGG: gtn:GTNG_0273  SpaE
YP_003252307.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK0312 lantibiotic ABC transporter ATP-binding protein
YP_003252308.1	PFAM: GCN5-related N-acetyltransferase; KEGG: ter:Tery_4634 GCN5-related N-acetyltransferase
YP_003252309.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gka:GK0313 hypothetical protein
YP_003252310.1	KEGG: gka:GK0314 glycine betaine/carnitine/choline ABC transporter ATP-binding protein; TIGRFAM: glycine betaine/L-proline ABC transporter ATPase; PFAM: ABC transporter; hypothetical protein; SMART: ATPase AAA; hypothetical protein
YP_003252311.1	PFAM: substrate-binding region of ABC-type glycine betaine transporter; KEGG: gka:GK0315 hypothetical protein
YP_003252312.1	KEGG: gka:GK0316 coiled-coil protein
YP_003252313.1	PFAM: conserved hypothetical protein; KEGG: gka:GK0317 hypothetical protein
YP_003252314.1	PFAM: conserved hypothetical protein; KEGG: gka:GK0318 hypothetical protein
YP_003252315.1	PFAM: SMC domain protein; KEGG: gka:GK0319 hypothetical protein
YP_003252316.1	PFAM: conserved hypothetical protein; KEGG: gka:GK0320 hypothetical protein
YP_003252317.1	KEGG: gka:GK2852 hypothetical protein
YP_003252318.1	TIGRFAM: CRISPR-associated protein, TM1802 family; CRISPR-associated protein, Csh1 family; PFAM: CRISPR-associated protein TM1802; KEGG: gwc:GWCH70_0305 CRISPR-associated protein, TM1802 family
YP_003252319.1	TIGRFAM: CRISPR-associated protein, Csh2 family; CRISPR-associated protein, CT1132 family; PFAM: CRISPR-associated protein TM1801; KEGG: gwc:GWCH70_0306 CRISPR-associated protein, Csh2 family
YP_003252320.1	TIGRFAM: CRISPR-associated protein Cas5, Hmari subtype; CRISPR-associated protein Cas5; KEGG: gwc:GWCH70_0307 CRISPR-associated protein Cas5, Hmari subtype
YP_003252321.1	KEGG: gwc:GWCH70_0308 CRISPR-associated helicase Cas3; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated HD domain protein; PFAM: helicase; SMART: helicase
YP_003252322.1	TIGRFAM: CRISPR-associated protein Cas4; PFAM: CRISPR-associated protein Cas4; KEGG: gwc:GWCH70_0309 CRISPR-associated protein Cas4
YP_003252323.1	TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; KEGG: gwc:GWCH70_0310 CRISPR-associated protein Cas1
YP_003252324.1	TIGRFAM: CRISPR-associated protein Cas2; PFAM: protein of unknown function DUF196; KEGG: gwc:GWCH70_0311 CRISPR-associated protein Cas2
YP_003252325.1	TIGRFAM: CRISPR-associated protein Cas6; PFAM: protein of unknown function DUF57; KEGG: gtn:GTNG_0279 hypothetical protein
YP_003252326.1	TIGRFAM: CRISPR-associated protein, APE2256 family; KEGG: gwc:GWCH70_0313 hypothetical protein
YP_003252327.1	TIGRFAM: CRISPR-associated protein DxTHG motif; CRISPR-associated protein, TM1812 family; PFAM: CRISPR-associated protein TM1812; KEGG: gwc:GWCH70_0314 CRISPR-associated protein, TM1812 family
YP_003252328.1	TIGRFAM: CRISPR-associated RAMP protein, Cmr1 family; KEGG: gwc:GWCH70_0315 CRISPR-associated RAMP protein, Cmr1 family
YP_003252329.1	TIGRFAM: CRISPR-associated protein, Crm2 family; KEGG: gwc:GWCH70_0316 CRISPR-associated protein, Crm2 family
YP_003252330.1	PFAM: CRISPR-associated protein, Cmr3; KEGG: gwc:GWCH70_0317  DNA repair protein
YP_003252331.1	TIGRFAM: CRISPR-associated RAMP protein, Cmr4 family; PFAM: protein of unknown function DUF324; KEGG: gwc:GWCH70_0318 CRISPR-associated RAMP protein, Cmr4 family
YP_003252332.1	TIGRFAM: CRISPR-associated protein, Cmr5 family; PFAM: CRISPR-associated protein TM1791.1; KEGG: gwc:GWCH70_0319 CRISPR-associated protein, Cmr5 family
YP_003252333.1	TIGRFAM: CRISPR-associated RAMP protein, Cmr6 family; PFAM: protein of unknown function DUF324; KEGG: gwc:GWCH70_0320 CRISPR-associated RAMP protein, Cmr6 family
YP_003252334.1	PFAM: transposase IS4 family protein; KEGG: gka:GK3116 transposase
YP_003252335.1	PFAM: peptidase S58 DmpA; KEGG: gka:GK0323 D-aminopeptidase
YP_003252336.1	PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: bbe:BBR47_58280  groupII intron-encoded protein
YP_003252338.1	PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: gka:GK0324 drug-efflux transporter
YP_003252339.1	PFAM: PspA/IM30 family protein; KEGG: gka:GK0325 hypothetical protein
YP_003252340.1	KEGG: gka:GK0326 hypothetical protein
YP_003252341.1	KEGG: gka:GK0327 hypothetical protein
YP_003252342.1	KEGG: tex:Teth514_0637 hypothetical protein
YP_003252345.1	TIGRFAM: YhgE/Pip C-terminal domain protein; YhgE/Pip N-terminal domain protein; KEGG: gka:GK0328 hypothetical protein
YP_003252346.1	PFAM: regulatory protein TetR; KEGG: afl:Aflv_2277 TetR family transcriptional regulator/AcrR family
YP_003252347.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gtn:GTNG_0284 two component system histidine kinase
YP_003252348.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: gka:GK0331 transcriptional regulator
YP_003252349.1	PFAM: PepSY-associated TM helix domain protein; KEGG: pth:PTH_0040 hypothetical protein
YP_003252351.1	PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; KEGG: gka:GK0332 serine protease Do
YP_003252352.1	KEGG: tex:Teth514_0275 hypothetical protein
YP_003252354.1	KEGG: gka:GK0336 hypothetical protein
YP_003252355.1	PFAM: protein of unknown function DUF2253, membrane; KEGG: gka:GK0337 hypothetical protein
YP_003252356.1	KEGG: gka:GK0338 hypothetical protein
YP_003252357.1	KEGG: gka:GK0339 hypothetical protein
YP_003252358.1	PFAM: band 7 protein; SMART: band 7 protein; KEGG: gka:GK0340 epidermal surface antigen
YP_003252359.1	similar to YegS from E. coli
YP_003252360.1	TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; protein of unknown function Met10; (uracil-5)-methyltransferase; KEGG: gka:GK0342 RNA methyltransferase
YP_003252362.1	KEGG: amt:Amet_2124 hypothetical protein
YP_003252364.1	TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: gka:GK0354 sodium:alanine symporter
YP_003252365.1	KEGG: bwe:BcerKBAB4_0586 hypothetical protein
YP_003252366.1	PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: pjd:Pjdr2_5367 ArsR family transcriptional regulator
YP_003252367.1	PFAM: activator of Hsp90 ATPase 1 family protein; KEGG: pjd:Pjdr2_5368 activator of HSP90 ATPase 1 family protein
YP_003252368.1	KEGG: gka:GK0357 RNA methyltransferase; TIGRFAM: RNA methyltransferase, TrmA family; PFAM: (uracil-5)-methyltransferase
YP_003252369.1	PFAM: SpoOM family protein; KEGG: gka:GK0358 sporulation control protein
YP_003252370.1	PFAM: NUDIX hydrolase; KEGG: gtn:GTNG_0329 mutator MutT protein/7,8-dihydro-8-oxoguanine-triphosphatase
YP_003252371.1	PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; oxidoreductase domain; KEGG: gka:GK0359 dehydrogenase
YP_003252372.1	PFAM: nucleotidyl transferase; transferase hexapeptide repeat containing protein; KEGG: gka:GK0360 nucleoside-diphosphate-sugar pyrophosphorylase
YP_003252373.1	PFAM: glycosyl transferase group 1; KEGG: gka:GK0361 hypothetical protein
YP_003252374.1	KEGG: gka:GK0362 hypothetical protein
YP_003252375.1	PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; KEGG: gka:GK0363 phosphomannomutase
YP_003252376.1	PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; KEGG: gka:GK0364 hypothetical protein
YP_003252377.1	TIGRFAM: anti-anti-sigma factor; PFAM: sulfate transporter/antisigma-factor antagonist STAS; KEGG: gka:GK0366 anti-sigma factor antagonist
YP_003252378.1	KEGG: gka:GK0367 hypothetical protein; TIGRFAM: PAS sensor protein; PFAM: stage II sporulation E family protein; PAS fold-3 domain protein; SMART: protein phosphatase 2C domain protein; PAC repeat-containing protein; PAS domain containing protein
YP_003252379.1	PFAM: RDD domain containing protein; KEGG: gka:GK0368 hypothetical protein
YP_003252380.1	PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: gka:GK0369 methyl-accepting chemotaxis protein
YP_003252381.1	required for the synthesis of the hydromethylpyrimidine moiety of thiamine
YP_003252382.1	TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; transposase IS891/IS1136/IS1341 family; KEGG: gka:GK0371 transposase
YP_003252383.1	PFAM: aminotransferase class I and II; KEGG: gka:GK0372 aspartate aminotransferase
YP_003252384.1	PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; KEGG: gka:GK0373 thiamine pyrophosphate protein
YP_003252385.1	PFAM: aldehyde dehydrogenase; KEGG: gka:GK0374 aldehyde dehydrogenase
YP_003252386.1	PFAM: saccharopine dehydrogenase; KEGG: gka:GK0375 L-lysine dehydrogenase
YP_003252387.1	PFAM: major facilitator superfamily MFS_1; KEGG: gtn:GTNG_0351 multidrug resistance protein
YP_003252388.1	PFAM: regulatory protein MerR; transcription regulator MerR DNA binding; SMART: regulatory protein MerR; KEGG: gtn:GTNG_0352 MerR family transcriptional regulator
YP_003252389.1	PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: gka:GK0377 carbon monoxide dehydrogenase small subunit
YP_003252390.1	PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: gka:GK0378 carbon monoxide dehydrogenase middle subunit
YP_003252391.1	PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: gka:GK0379 carbon monoxide dehydrogenase large subunit
YP_003252392.1	TIGRFAM: xanthine dehydrogenase accessory protein pucB; KEGG: gka:GK0380 hypothetical protein
YP_003252393.1	PFAM: protein of unknown function DUF182; KEGG: gka:GK0381 hypothetical protein
YP_003252394.1	KEGG: gka:GK0382 hypothetical protein
YP_003252395.1	PFAM: band 7 protein; SMART: band 7 protein; KEGG: gka:GK0383 hypothetical protein
YP_003252396.1	regulates expression of hut operon by antitermination mechanism; forms a homohexamer; binds both magnesium and L-histidine and then binds RNA sequences within the terminator region and destabilizes the terminator structure
YP_003252397.1	catalyzes the degradation of histidine to urocanate and ammmonia
YP_003252398.1	PFAM: integral membrane protein TerC; KEGG: gka:GK0386 hypothetical protein
YP_003252399.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: gka:GK0387 D-isomer specific 2-hydroxyacid dehydrogenase
YP_003252400.1	PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: gwc:GWCH70_0167 transposase IS204/IS1001/IS1096/IS1165 family protein
YP_003252403.1	PFAM: protein of unknown function DUF162; KEGG: gka:GK0393 hypothetical protein
YP_003252404.1	TIGRFAM: iron-sulfur cluster binding protein; PFAM: protein of unknown function DUF162; KEGG: gka:GK0394 hypothetical protein
YP_003252405.1	PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: gka:GK0395 glycolate oxidase
YP_003252406.1	PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: gka:GK0396 GntR family transcriptional regulator
YP_003252407.1	TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: gka:GK0398 L-lactate permease
YP_003252408.1	PFAM: cell shape determining protein MreB/Mrl; KEGG: gka:GK0399 rod shape-determining protein MreB
YP_003252409.1	PFAM: NLP/P60 protein; KEGG: gka:GK0400 hypothetical protein
YP_003252410.1	KEGG: gka:GK0401 hypothetical protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein
YP_003252411.1	PFAM: DnaJ homologue, subfamily C, member 28, conserved domain; KEGG: gka:GK0402 hypothetical protein
YP_003252412.1	KEGG: gtn:GTNG_0378 hypothetical protein
YP_003252413.1	TIGRFAM: siroheme synthase; KEGG: gka:GK0404 siroheme synthase
YP_003252414.1	TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: gka:GK0406 hypothetical protein
YP_003252415.1	PFAM: LmbE family protein; KEGG: gka:GK0407 hypothetical protein
YP_003252416.1	PFAM: protein of unknown function DUF1806; KEGG: gka:GK0408 hypothetical protein
YP_003252417.1	KEGG: gka:GK0409 hypothetical protein
YP_003252418.1	catalyzes the hydrolysis of acylphosphate
YP_003252419.1	PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: gka:GK0412 hypothetical protein
YP_003252420.1	catalyzes 2 sequential methylations, the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III, and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1
YP_003252421.1	KEGG: gka:GK0414 adenylylsulfate kinase; TIGRFAM: adenylylsulfate kinase; PFAM: adenylylsulfate kinase
YP_003252422.1	ATP sulfurylase; ATPS; converts ATP and sulfate to 5'phosphosulfate and pyrophosphate; in some organisms this enzyme is involved in the incorporation of inorganic sulfate while in others it is involved in the production of ATP in the reverse direction; the enzyme from Thermus thermophilus is dimeric and binds a zinc ion that is coordinated by cysteine and histidine residues that are not found in all related proteins but is found in some thermophilic organisms
YP_003252423.1	TIGRFAM: phosphoadenosine phosphosulfate reductase; adenylylsulfate reductase, thioredoxin dependent; PFAM: phosphoadenosine phosphosulfate reductase; KEGG: gka:GK0416 phosphoadenylyl-sulfate reductase (thioredoxin-dependent)
YP_003252424.1	KEGG: gka:GK0417 hypothetical protein
YP_003252425.1	PFAM: protein of unknown function DUF1128; KEGG: gka:GK0418 hypothetical protein
YP_003252426.1	PFAM: protein-tyrosine phosphatase, low molecular weight; SMART: protein-tyrosine phosphatase, low molecular weight; KEGG: gka:GK0419 protein-tyrosine phosphatase
YP_003252427.1	TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN; KEGG: gka:GK0420 transporter
YP_003252428.1	KEGG: gwc:GWCH70_0419 hypothetical protein
YP_003252429.1	KEGG: gka:GK0421 hypothetical protein
YP_003252430.1	PFAM: major facilitator superfamily MFS_1; KEGG: gka:GK0422 multidrug-efflux transporter
YP_003252431.1	TIGRFAM: calcium/proton antiporter, CaCA family; calcium/proton exchanger; PFAM: sodium/calcium exchanger membrane region; KEGG: gka:GK0423 H+/Ca2+ exchanger
YP_003252432.1	KEGG: gka:GK0424 hypothetical protein
YP_003252433.1	PFAM: YfkB-like domain protein; radical SAM domain protein; KEGG: gka:GK0425 hypothetical protein
YP_003252434.1	TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, subunit alpha; hydro-lyase, Fe-S type, tartrate/fumarate subfamily subunit beta; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: gka:GK0426 fumarate hydratase class I (fumarase)
YP_003252435.1	TIGRFAM: delta-lactam-biosynthetic de-N-acetylase; PFAM: polysaccharide deacetylase; KEGG: gka:GK0427 nodulation protein
YP_003252436.1	KEGG: gka:GK0428 DNA-3-methyladenine glycosidase II; PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein
YP_003252437.1	TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; (uracil-5)-methyltransferase; KEGG: gka:GK0429 RNA methyltransferase
YP_003252439.1	PFAM: beta-lactamase; KEGG: hau:Haur_4498 beta-lactamase domain-containing protein
YP_003252440.1	KEGG: oih:OB3306 hypothetical protein
YP_003252441.1	KEGG: gka:GK0430 hypothetical protein
YP_003252442.1	PFAM: PspA/IM30 family protein; KEGG: gka:GK0431 hypothetical protein
YP_003252443.1	PFAM: cell wall-active antibiotics response protein; KEGG: gka:GK0432 hypothetical protein
YP_003252444.1	KEGG: gka:GK0433 two-component sensor histidine kinase; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein
YP_003252445.1	PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; response regulator receiver; KEGG: gka:GK0434 two-component response regulator
YP_003252446.1	KEGG: gka:GK0435 hypothetical protein
YP_003252447.1	PFAM: protein of unknown function UPF0061; KEGG: gka:GK0436 hypothetical protein
YP_003252448.1	KEGG: gka:GK0437 hypothetical protein
YP_003252449.1	PFAM: TipAS antibiotic-recognition domain protein; regulatory protein MerR; transcription regulator MerR DNA binding; SMART: regulatory protein MerR; KEGG: gka:GK0438 transcriptional activator
YP_003252450.1	PFAM: ABC transporter ATPase, predicted; KEGG: gka:GK0439 hypothetical protein
YP_003252451.1	PFAM: protein of unknown function DUF2294; KEGG: gka:GK0441 hypothetical protein
YP_003252452.1	Catalyzes the transfer of electrons from NADH to ubiquinone
YP_003252453.1	PFAM: protein of unknown function DUF2309; KEGG: gka:GK0443 hypothetical protein
YP_003252454.1	KEGG: gka:GK0444 hypothetical protein
YP_003252455.1	PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: gka:GK0445 acyl-CoA dehydrogenase
YP_003252456.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: gka:GK0446 hypothetical protein
YP_003252457.1	PFAM: glycosyl transferase family 8; KEGG: gka:GK0447 hypothetical protein
YP_003252458.1	KEGG: gka:GK0448 hypothetical protein
YP_003252459.1	KEGG: gka:GK0449 hypothetical protein
YP_003252460.1	KEGG: gka:GK0450 hypothetical protein
YP_003252461.1	PFAM: hypothetical protein; NAD-dependent epimerase/dehydratase; KEGG: gka:GK0451 cell-division inhibitor
YP_003252462.1	binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities
YP_003252463.1	PFAM: protein of unknown function DUF1811; KEGG: gka:GK0453 hypothetical protein
YP_003252464.1	KEGG: gka:GK0454 hypothetical protein
YP_003252465.1	SASP K; found in the forespore compartment
YP_003252466.1	PFAM: membrane-bound metal-dependent hydrolase; KEGG: gka:GK0456 hypothetical protein
YP_003252468.1	PFAM: protein of unknown function DUF1641; KEGG: gka:GK0458 hypothetical protein
YP_003252469.1	TIGRFAM: formate dehydrogenase, subunit alpha; PFAM: molybdopterin oxidoreductase; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase Fe4S4 region; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; molydopterin dinucleotide-binding region; KEGG: gka:GK0459 formate dehydrogenase chain A
YP_003252470.1	PFAM: protein of unknown function DUF2294; KEGG: gka:GK0460 hypothetical protein
YP_003252471.1	involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth
YP_003252472.1	PFAM: major facilitator superfamily MFS_1; KEGG: gka:GK0462 oxalate:formate antiporter
YP_003252473.1	KEGG: gka:GK0463 adenine glycosylase; TIGRFAM: A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; helix-hairpin-helix motif; iron-sulfur cluster loop; SMART: HhH-GPD family protein; iron-sulfur cluster loop
YP_003252474.1	KEGG: gka:GK0464 hypothetical protein
YP_003252475.1	Catalyzes a key regulatory step in fatty acid biosynthesis
YP_003252477.1	KEGG: gka:GK0467 hypothetical protein
YP_003252478.1	PFAM: protein of unknown function DUF402; KEGG: gka:GK0468 hypothetical protein
YP_003252479.1	KEGG: gka:GK1903 transposase
YP_003252480.1	PFAM: extracellular solute-binding protein family 5; KEGG: gtn:GTNG_0478 peptide ABC transporter
YP_003252481.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gtn:GTNG_0479 peptide ABC transporter permease
YP_003252482.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gka:GK0469 dipeptide ABC transporter (permease)
YP_003252483.1	PFAM: protein of unknown function DUF939; KEGG: gtn:GTNG_0481 integral membrane protein
YP_003252484.1	converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate
YP_003252485.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK0472 ABC transporter ATP-binding protein
YP_003252486.1	PFAM: protein of unknown function DUF990; KEGG: gka:GK0473 hypothetical protein
YP_003252487.1	PFAM: protein of unknown function DUF990; KEGG: gka:GK0474 hypothetical protein
YP_003252488.1	Converts (S)-lactate and NAD(+) to pyruvate and NADH
YP_003252489.1	PFAM: ion transport 2 domain protein; KEGG: gka:GK0476 K+ channel subunit
YP_003252490.1	PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; redoxin; KEGG: gka:GK0477 bacterioferritin comigratory protein
YP_003252491.1	PFAM: ferric-uptake regulator; KEGG: gka:GK0478 FUR family transcriptional regulator
YP_003252492.1	KEGG: gka:GK0479 hypothetical protein
YP_003252493.1	KEGG: gka:GK0480 hypothetical protein
YP_003252494.1	PFAM: B3/4 domain protein; KEGG: gka:GK0481 hypothetical protein
YP_003252495.1	KEGG: gka:GK0482 hypothetical protein; TIGRFAM: iron-sulfur cluster binding protein; PFAM: hypothetical protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; PBS lyase HEAT domain protein repeat-containing protein; SMART: PBS lyase HEAT domain protein repeat-containing protein
YP_003252496.1	KEGG: gka:GK0483 hypothetical protein
YP_003252497.1	TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: gka:GK0484 rRNA methylase
YP_003252498.1	KEGG: gka:GK0485 hypothetical protein
YP_003252499.1	PFAM: PrkA AAA domain protein; PrkA serine kinase; SMART: PrkA AAA domain protein; KEGG: gka:GK0486 serine protein kinase
YP_003252500.1	TIGRFAM: sporulation protein YhbH; PFAM: protein of unknown function DUF444; KEGG: gtn:GTNG_0498 hypothetical protein
YP_003252501.1	KEGG: gka:GK0556 hypothetical protein
YP_003252502.1	PFAM: response regulator receiver; Helix-turn-helix type 11 domain protein; SMART: response regulator receiver; KEGG: gka:GK0558 two-component response regulator
YP_003252503.1	PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; KEGG: gka:GK0559 two-component sensor histidine kinase
YP_003252504.1	TIGRFAM: TRAP dicarboxylate transporter DctP subunit; PFAM: extracellular solute-binding protein, family 7, bacteria; KEGG: gka:GK0560 C4-dicarboxylate transporter (substrate-bindindg protein)
YP_003252505.1	involved in the transport of C4-dicarboxylates across the membrane
YP_003252506.1	PFAM: aldo/keto reductase; KEGG: gka:GK0562 plant-metabolite dehydrogenase
YP_003252507.1	PFAM: peptidase membrane zinc metallopeptidase KEGG: gka:GK0563 hypothetical protein
YP_003252508.1	PFAM: protein of unknown function DUF21; hypothetical protein; transporter-associated region; KEGG: gka:GK0564 hemolysin
YP_003252509.1	TIGRFAM: pseudouridine synthase; PFAM: pseudouridine synthase; KEGG: gka:GK0565 ribosomal large subunit pseudouridine synthase
YP_003252510.1	KEGG: gka:GK0566 hypothetical protein
YP_003252511.1	PFAM: thioredoxin domain; KEGG: gka:GK0567 hypothetical protein
YP_003252512.1	PFAM: disulfide bond formation protein DsbB; KEGG: gka:GK0568  disulfide oxidoreductase
YP_003252513.1	PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: gka:GK0569 inosine-5-monophosphate dehydrogenase
YP_003252514.1	PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: gka:GK0570 phosphomannomutase
YP_003252515.1	KEGG: gka:GK0571 hypothetical protein
YP_003252516.1	KEGG: gka:GK0572 hypothetical protein
YP_003252517.1	PFAM: SNARE associated Golgi protein; KEGG: gka:GK0573 alkaline phosphatase
YP_003252518.1	PFAM: transposase IS4 family protein; KEGG: gka:GK2942 hypothetical protein
YP_003252519.1	PFAM: SpoVR family protein; KEGG: gtn:GTNG_0517 stage V sporulation protein R
YP_003252520.1	KEGG: gka:GK2084 cytochrome bd-type ubiquinol oxidase subunit I
YP_003252521.1	KEGG: gka:GK0607 hypothetical protein
YP_003252522.1	PFAM: small multidrug resistance protein; KEGG: gka:GK0608 chaperone protein
YP_003252523.1	KEGG: gka:GK1903 transposase
YP_003252524.1	PFAM: integral membrane protein TerC; KEGG: gka:GK0610 hypothetical protein
YP_003252525.1	KEGG: gka:GK0611 hypothetical protein
YP_003252526.1	PFAM: carbon starvation protein CstA; KEGG: gka:GK0612 carbon starvation protein
YP_003252527.1	PFAM: protein of unknown function DUF466; KEGG: gka:GK0613 hypothetical protein
YP_003252528.1	KEGG: gka:GK0614 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein
YP_003252529.1	PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: gka:GK0615 exo-alpha-1,4-glucosidase
YP_003252530.1	KEGG: gka:GK0616 metal-dependent hydrolase
YP_003252531.1	PFAM: major facilitator superfamily MFS_1; KEGG: gka:GK0617 antibiotic resistance protein (antibiotic efflux protein)
YP_003252532.1	PFAM: protein of unknown function Met10; RNA methylase; SMART: PUA domain containing protein; KEGG: gtn:GTNG_0531 SAM-dependent methyltransferase
YP_003252533.1	PFAM: TENA/THI-4 domain protein; KEGG: gka:GK0618 transcriptional regulator
YP_003252534.1	PFAM: ABC-type thiamin-related transporter, permease component 1, predicted; KEGG: gka:GK0619 hypothetical protein
YP_003252535.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK0620 hypothetical protein
YP_003252536.1	PFAM: cobalt transporter; KEGG: gka:GK0621 hypothetical protein
YP_003252537.1	regulates the production of extracellular enzymes
YP_003252538.1	TIGRFAM: glycine oxidase ThiO; PFAM: FAD dependent oxidoreductase; KEGG: gka:GK0623 glycine oxidase
YP_003252539.1	with ThiF, ThiG, and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate
YP_003252540.1	functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate
YP_003252541.1	catalyzes the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD or ThiS in the molybdopterin or thiamin pyrophosphate biosynthesis pathways
YP_003252542.1	PFAM: protein of unknown function DUF21; hypothetical protein; transporter-associated region; SMART: hypothetical protein; KEGG: gka:GK0628 hypothetical protein
YP_003252544.1	PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: bbe:BBR47_58280  groupII intron-encoded protein
YP_003252545.1	PFAM: small acid-soluble spore protein alpha/beta type; KEGG: gka:GK0629 small acid-soluble spore protein
YP_003252546.1	KEGG: gka:GK0630 hypothetical protein
YP_003252547.1	PFAM: ABC transporter; TOBE domain protein; transport-associated OB domain protein; SMART: ATPase AAA; KEGG: gka:GK0631 sugar ABC transporter ATP-binding protein
YP_003252548.1	KEGG: gka:GK0632 hypothetical protein
YP_003252549.1	KEGG: gka:GK0633 hypothetical protein
YP_003252550.1	KEGG: gka:GK0634 hypothetical protein
YP_003252551.1	KEGG: gka:GK0635 hypothetical protein
YP_003252552.1	KEGG: gka:GK0636 hypothetical protein
YP_003252553.1	KEGG: gka:GK0637 hypothetical protein
YP_003252554.1	KEGG: gka:GK0638 hypothetical protein
YP_003252555.1	PFAM: protein of unknown function DUF445; KEGG: gka:GK0639 hypothetical protein
YP_003252556.1	PFAM: protein of unknown function DUF964; KEGG: gka:GK0640 hypothetical protein
YP_003252557.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase type 3; Haloacid dehalogenase domain protein hydrolase; KEGG: gka:GK0641 hypothetical protein
YP_003252559.1	PFAM: ABC transporter; ABC transporter transmembrane region; SMART: ATPase AAA; KEGG: pmo:Pmob_0688 ABC transporter related
YP_003252560.1	KEGG: kol:Kole_0792 hypothetical protein
YP_003252561.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: pmo:Pmob_1530 ABC transporter
YP_003252562.1	PFAM: radical SAM protein; KEGG: pmo:Pmob_0677 hypothetical protein
YP_003252563.1	PFAM: radical SAM protein; KEGG: dth:DICTH_0218  regulatory protein
YP_003252564.1	PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: gwc:GWCH70_0167 transposase IS204/IS1001/IS1096/IS1165 family protein
YP_003252565.1	PFAM: transposase IS4 family protein; KEGG: gwc:GWCH70_3382 transposase IS4 family protein
YP_003252566.1	KEGG: gka:GK1900 transposase
YP_003252567.1	catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III
YP_003252568.1	KEGG: gka:GK1903 transposase
YP_003252570.1	KEGG: bln:Blon_0984 hypothetical protein
YP_003252571.1	KEGG: gka:GK0643 hypothetical protein
YP_003252572.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK0644 ABC transporter ATP-binding protein
YP_003252573.1	KEGG: gka:GK0645 ABC transporter (permease) (Na+ exclusion)
YP_003252574.1	catalyzes the exonucleic cleavage of mRNA yielding nucleioside 5'-phosphates
YP_003252575.1	KEGG: gka:GK0648 hypothetical protein
YP_003252576.1	catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine
YP_003252577.1	KEGG: gka:GK0650 hypothetical protein
YP_003252578.1	KEGG: gka:GK0651 hypothetical protein
YP_003252579.1	hpr; ScoC; MarR family; protease production regulatory protein
YP_003252580.1	PFAM: protein of unknown function DUF1878; KEGG: gka:GK0653 hypothetical protein
YP_003252581.1	KEGG: gka:GK0654 hypothetical protein
YP_003252582.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: gka:GK0656 post-translocation molecular chaperone
YP_003252583.1	PFAM: histidine triad (HIT) protein; KEGG: gka:GK0657 Hit-like protein (cell-cycle regulation histidine triad)
YP_003252584.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK0658 ABC transporter ATP-binding protein
YP_003252585.1	PFAM: ABC transporter EcsB; KEGG: gka:GK0659 ABC transporter (permease)
YP_003252586.1	KEGG: gka:GK0660 hypothetical protein
YP_003252587.1	catalyzes the formation of coproporphyrinogen from uroporphyrinogen III
YP_003252588.1	protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic
YP_003252589.1	catalyzes the formation of protoporphyrin IX from protoporphyrinogen IX
YP_003252590.1	PFAM: regulatory protein TetR; KEGG: gka:GK0664 TetR/AcrR family transcriptional regulator
YP_003252591.1	KEGG: gka:GK0665 hypothetical protein
YP_003252592.1	KEGG: gka:GK0666 hypothetical protein
YP_003252593.1	PFAM: beta-lactamase; KEGG: gka:GK0667 hypothetical protein
YP_003252594.1	activates fatty acids by binding to coenzyme A
YP_003252595.1	PFAM: protein of unknown function DUF534; KEGG: gka:GK0669 ABC transporter (substrate-binding protein)
YP_003252596.1	PFAM: inner-membrane translocator; KEGG: gka:GK0670 ABC transporter (permease)
YP_003252597.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK0671 ABC transporter ATP-binding protein
YP_003252598.1	TIGRFAM: D-amino acid aminotransferase; PFAM: aminotransferase class IV; KEGG: gka:GK0672 D-alanine aminotransferase
YP_003252599.1	PFAM: AzlC family protein; KEGG: gka:GK0673 branched-chain amino acid transporter
YP_003252600.1	PFAM: branched-chain amino acid transport; KEGG: gka:GK0674 hypothetical protein
YP_003252601.1	PFAM: electron transporter SCO1/SenC; KEGG: gka:GK0675 manganese oxidation
YP_003252602.1	TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: gka:GK0676 isocitrate lyase
YP_003252603.1	KEGG: gka:GK0677 hypothetical protein
YP_003252604.1	PFAM: ComK family protein; KEGG: gka:GK0678 competence transcription factor
YP_003252605.1	PFAM: SNARE associated Golgi protein; KEGG: gtn:GTNG_0586 hypothetical protein
YP_003252606.1	KEGG: gka:GK0680 signal peptidase I (SPase I); TIGRFAM: signal peptidase I; PFAM: peptidase S24/S26A/S26B, conserved region
YP_003252607.1	TIGRFAM: ATP-dependent nuclease subunit B; KEGG: gka:GK0681 ATP-dependent deoxyribonuclease subunit B
YP_003252608.1	KEGG: gka:GK0682 ATP-dependent deoxyribonuclease subunit A; TIGRFAM: recombination helicase AddA; PFAM: UvrD/REP helicase
YP_003252609.1	TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; KEGG: gka:GK0683 DNA repair exonuclease
YP_003252610.1	PFAM: SMC domain protein; KEGG: gka:GK0684 DNA exonuclease
YP_003252611.1	PFAM: Spore germination protein gerPA/gerPF; KEGG: gka:GK0685 spore germination protein
YP_003252612.1	KEGG: gka:GK0686 spore germination protein
YP_003252613.1	KEGG: gka:GK0687 spore germination protein
YP_003252614.1	PFAM: Spore germination protein GerPC; KEGG: gka:GK0688 spore germination protein
YP_003252615.1	KEGG: gka:GK0689 spore germination protein
YP_003252616.1	PFAM: Spore germination protein gerPA/gerPF; KEGG: gka:GK0690 spore germination protein
YP_003252617.1	PFAM: Spore germination protein gerPA/gerPF; KEGG: gka:GK0691 spore germination protein
YP_003252618.1	PFAM: Spore germination protein gerPA/gerPF; KEGG: gka:GK0692 spore germination protein
YP_003252619.1	PFAM: AMP-dependent synthetase and ligase; KEGG: gka:GK0693 AMP-binding enzyme
YP_003252620.1	PFAM: protein of unknown function DUF405; protein of unknown function DUF418; KEGG: gka:GK0694 hypothetical protein
YP_003252621.1	PFAM: sporulation stage 0, Spo0E-like regulatory phosphatase; KEGG: gka:GK0695 hypothetical protein
YP_003252622.1	PFAM: fumarylacetoacetate hydrolase; KEGG: gka:GK0696 hypothetical protein
YP_003252623.1	PFAM: protein of unknown function DUF1516; KEGG: gka:GK0697 hypothetical protein
YP_003252624.1	KEGG: gka:GK0698 hypothetical protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; FIST C domain; hypothetical protein; GGDEF domain containing protein; hypothetical protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein
YP_003252625.1	KEGG: gka:GK0699 hypothetical protein
YP_003252626.1	KEGG: gka:GK0700 asparagine synthetase (glutamine-hydrolyzing); TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferase class-II
YP_003252627.1	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: gka:GK0701 Na+ driven multidrug efflux pump
YP_003252628.1	TIGRFAM: transposase, IS605 OrfB family; PFAM:  transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB; KEGG: gka:GK2101 transposase
YP_003252629.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: gka:GK0702 AraC/XylS family transcriptional regulator
YP_003252630.1	PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein Ig domain protein region domain protein; SMART: alpha amylase catalytic sub domain; KEGG: gka:GK0703 alpha-cyclodextrinase
YP_003252631.1	PFAM: extracellular solute-binding protein family 1; KEGG: gka:GK0704 maltose/maltodextrin transporter (subsrate-binding protein)
YP_003252632.1	PFAM: binding-protein-dependent transporters inner membrane component; hypothetical protein; KEGG: gka:GK0705 maltose/maltodextrin transporter (permease)
YP_003252633.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gka:GK0706 maltose/maltodextrin transporter (permease)
YP_003252634.1	PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: gka:GK0707 alpha-amylase
YP_003252635.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: gka:GK0708 transcriptional regulator involved in carbon catabolite control
YP_003252636.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; PAS fold domain protein; ATPase AAA; SMART: AAA ATPase; PAS domain containing protein; KEGG: gka:GK0709 acetoin operon expression regulatory protein
YP_003252637.1	PFAM: dehydrogenase E1 component; KEGG: gka:GK0710 thiamine pyrophosphate-dependent dehydrogenase, E1 component subunit alpha
YP_003252638.1	PFAM: transketolase; transketolase domain protein; KEGG: gka:GK0711 thiamine pyrophosphate-dependent dehydrogenase, E1 component subunit beta
YP_003252639.1	PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; KEGG: gka:GK0712 pyruvate dehydrogenase E2 (dihydrolipoamide acetyltransferase)
YP_003252640.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gka:GK0713 short chain dehydrogenase/reductase family oxidoreductase
YP_003252641.1	TIGRFAM: AbrB family transcriptional regulator; PFAM: SpoVT/AbrB domain protein; KEGG: gka:GK0715 hypothetical protein
YP_003252642.1	PFAM: PilT protein domain protein; KEGG: aac:Aaci_3102 PilT protein domain protein
YP_003252643.1	TIGRFAM: methionine synthase; PFAM: homocysteine S-methyltransferase; methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; dihydropteroate synthase DHPS; Vitamin B12 dependent methionine synthase activation region; KEGG: gka:GK0716 5-methyltetrahydrofolate--homocysteine S-methyltransferase
YP_003252644.1	catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine; expressed in B. subtilis under methionine starvation conditions
YP_003252645.1	KEGG: gka:GK0718 hypothetical protein
YP_003252647.1	TIGRFAM: conserved hypothetical protein; PFAM: bacteriocin AS-48; KEGG: gka:GK0719 circularin A precursor
YP_003252648.1	KEGG: gka:GK0720 hypothetical protein
YP_003252649.1	PFAM: protein of unknown function DUF95 transmembrane; KEGG: gka:GK0721 hypothetical protein
YP_003252650.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK0722 ABC transporter ATP-binding protein
YP_003252651.1	KEGG: gka:GK0723 spermidine/putrescine ABC transporter ATP-binding protein; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA
YP_003252652.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gka:GK0724 spermidine/putrescine ABC transporter (permease)
YP_003252653.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gtn:GTNG_0625 spermidine/putrescine ABC transporter permease
YP_003252654.1	PFAM: extracellular solute-binding protein family 1; KEGG: gka:GK0726 spermidine/putrescine ABC transporter (substrate-binding protein)
YP_003252655.1	PFAM: protein of unknown function DUF1572; KEGG: gka:GK0734 hypothetical protein
YP_003252656.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK0737 multidrug ABC transporter ATP-binding protein
YP_003252657.1	KEGG: gtn:GTNG_0294 hypothetical protein
YP_003252658.1	nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription
YP_003252659.1	KEGG: gka:GK0743 hypothetical protein
YP_003252660.1	PFAM: filamentation induced by cAMP protein Fic; KEGG: gka:GK0744 hypothetical protein
YP_003252661.1	TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: gka:GK0745 hypothetical protein
YP_003252662.1	KEGG: gtn:GTNG_0633 hypothetical protein
YP_003252663.1	KEGG: gka:GK0746 hypothetical protein
YP_003252664.1	TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase type 3; haloacid dehalogenase; sucrose-6F-phosphate phosphohydrolase; KEGG: gka:GK0747 hypothetical protein
YP_003252665.1	KEGG: gka:GK0748 hypothetical protein
YP_003252666.1	PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: gka:GK0749 cadmium efflux system accessory protein (cadmium-binding protein)
YP_003252667.1	TIGRFAM: ATPase P; ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: gka:GK0750 cation-transporting ATPase
YP_003252668.1	KEGG: gka:GK0751 hypothetical protein
YP_003252669.1	PFAM: protein of unknown function UPF0066; KEGG: gtn:GTNG_2796  transcriptional regulator
YP_003252670.1	PFAM: protein of unknown function DUF59; KEGG: gka:GK0753 hypothetical protein
YP_003252671.1	KEGG: gka:GK0754 hypothetical protein
YP_003252672.1	KEGG: gtn:GTNG_0640 hypothetical protein
YP_003252673.1	KEGG: gtn:GTNG_0641 hypothetical protein
YP_003252674.1	PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: gka:GK0757 Crp/Fnr family transcriptional regulator
YP_003252675.1	KEGG: gka:GK0758 nitric oxide reductase cytochrome b subunit
YP_003252676.1	KEGG: gka:GK0760 hypothetical protein
YP_003252678.1	PFAM: transposase IS4 family protein; KEGG: gka:GK0888 transposase
YP_003252679.1	KEGG: gka:GK0761 hypothetical protein
YP_003252680.1	PFAM: transposase IS4 family protein; KEGG: gka:GK2942 hypothetical protein
YP_003252681.1	PFAM: protein of unknown function DUF2249; KEGG: gtn:GTNG_0644 hypothetical protein
YP_003252682.1	KEGG: gka:GK0763 molybdopterin-guanine dinucleotide biosynthesis protein
YP_003252683.1	PFAM: regulatory protein LuxR; response regulator receiver; Bacterio-opsin activator HTH domain protein; SMART: regulatory protein LuxR; response regulator receiver; KEGG: gwc:GWCH70_0187 two component LuxR family transcriptional regulator
YP_003252684.1	KEGG: afl:Aflv_2813 hypothetical protein
YP_003252685.1	KEGG: gwc:GWCH70_0194 membrane protein, predicted permease
YP_003252686.1	KEGG: gwc:GWCH70_0195 membrane protein, predicted permease
YP_003252687.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: afl:Aflv_2810 ABC-type multidrug transporter, ATPase component
YP_003252688.1	PFAM: ABC transporter; SMC domain protein; SMART: ATPase AAA; KEGG: gwc:GWCH70_2300 ABC transporter
YP_003252689.1	KEGG: gwc:GWCH70_2299 hypothetical protein
YP_003252690.1	PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: gka:GK0765 hypothetical protein
YP_003252691.1	KEGG: bha:BH3217 hypothetical protein
YP_003252692.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: bha:BH3216 RNA polymerase ECF-type sigma factor
YP_003252693.1	KEGG: bha:BH3215 hypothetical protein
YP_003252694.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bha:BH3214 ABC transporter ATP-binding protein
YP_003252695.1	KEGG: bha:BH3213 hypothetical protein
YP_003252696.1	PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: gtn:GTNG_0657 Crp family transcriptional regulator
YP_003252697.1	TIGRFAM: molybdate ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gka:GK0769 molybdenum binding-protein-dependent transport system (permease)
YP_003252698.1	KEGG: gka:GK0770 molybdopterin cofactor biosynthesis protein; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: molybdenum cofactor synthesis domain protein; radical SAM protein; SMART: Elongator protein 3/MiaB/NifB
YP_003252699.1	TIGRFAM: iron-sulfur cluster repair di-iron protein; PFAM: protein of unknown function DUF542 ScdA domain protein; hemerythrin HHE cation binding domain protein; KEGG: gtn:GTNG_0660 nitric oxide-dependent regulator
YP_003252700.1	PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: gtn:GTNG_0661 methyl-accepting chemotaxis protein
YP_003252701.1	TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; MoeA domain protein domain IV; molybdopterin binding domain; KEGG: gka:GK0772 molybdopterin cofactor biosynthesis protein
YP_003252702.1	TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: gtn:GTNG_0663 molybdopterin-guanine dinucleotide biosynthesis protein B
YP_003252703.1	PFAM: molybdopterin biosynthesis MoaE protein; KEGG: gka:GK0774 molybdopterin converting factor (subunit 2)
YP_003252704.1	TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; KEGG: gka:GK0775 molybdopterin converting factor (subunit 1)
YP_003252705.1	KEGG: gka:GK0776 hypothetical protein
YP_003252706.1	KEGG: gka:GK2348 hypothetical protein
YP_003252707.1	PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: gka:GK0788 Crp/Fnr family transcriptional regulator
YP_003252708.1	catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate
YP_003252709.1	bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate
YP_003252710.1	catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate
YP_003252711.1	KEGG: gka:GK0793 acetylornithine aminotransferase; TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III
YP_003252712.1	catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers
YP_003252713.1	four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity
YP_003252714.1	catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation
YP_003252715.1	KEGG: gka:GK0798 hypothetical protein
YP_003252716.1	KEGG: gka:GK0799 ATP-dependent Clp protease ATP-binding subunit; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; ATPase AAA; Torsin; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: ATPase AAA
YP_003252717.1	KEGG: gka:GK0801 hypothetical protein
YP_003252718.1	KEGG: gka:GK0802 hypothetical protein
YP_003252719.1	KEGG: gka:GK0803 hypothetical protein
YP_003252720.1	FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs
YP_003252721.1	FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP
YP_003252722.1	PFAM: protein of unknown function DUF2268, Zn-dependent protease-related; KEGG: gka:GK0806 hypothetical protein
YP_003252723.1	KEGG: gka:GK0807 hypothetical protein
YP_003252724.1	KEGG: gka:GK0808 hypothetical protein
YP_003252725.1	catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_003252726.1	KEGG: gka:GK0810 hypothetical protein
YP_003252727.1	PFAM: extracellular solute-binding protein family 5; KEGG: gwc:GWCH70_0756 extracellular solute-binding protein family 5
YP_003252728.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gka:GK0812 oligopeptide ABC transporter (permease)
YP_003252729.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gka:GK0813 oligopeptide ABC transporter (permease)
YP_003252730.1	KEGG: gka:GK0814 oligopeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA
YP_003252731.1	PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; KEGG: gtn:GTNG_0695 oligopeptide ABC transporter ATP-binding protein
YP_003252732.1	KEGG: gka:GK0816 hypothetical protein
YP_003252733.1	the anti-alpha factor Spx interacts with RNA polymerase subunit alpha C-terminal domain in a region that interacts with the sigma 70 subunit and may interfere with activation of promoters; in Bacillus subtilis this protein is a substrate for ClpXP protease; blocks transcription of the competence regulatory gene encoded by the srf operon; regulates a number of genes involved in thiol homeostasis including trxA and trxB; monomeric member of ArsC family of proteins; does not bind DNA; contains a disulfide bond between C10 and C13 which may sense disulfide stress
YP_003252734.1	PFAM: integral membrane protein TerC; KEGG: gka:GK0818 hypothetical protein
YP_003252735.1	enables recognition and targeting of proteins for proteolysis, involved in negative regulation of competence
YP_003252736.1	catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol)
YP_003252737.1	PFAM: Competence CoiA family protein; KEGG: gka:GK0821 hypothetical protein
YP_003252738.1	TIGRFAM: oligoendopeptidase F; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; oligopeptidase F; KEGG: gka:GK0822 thimet oligoendopeptidase
YP_003252739.1	KEGG: gka:GK0823 hypothetical protein
YP_003252740.1	KEGG: gka:GK0824 hypothetical protein
YP_003252741.1	PFAM: globin; KEGG: gka:GK0825 hypothetical protein
YP_003252742.1	PFAM: lytic transglycosylase catalytic; KEGG: gka:GK0826 lytic transglycosylase
YP_003252743.1	PFAM: adenylate cyclase; KEGG: gka:GK0827 hypothetical protein
YP_003252744.1	KEGG: gka:GK0828 hypothetical protein
YP_003252745.1	PFAM: RelA/SpoT domain protein; KEGG: gka:GK0829 hypothetical protein
YP_003252746.1	catalyzes the phosphorylation of NAD to NADP
YP_003252747.1	TIGRFAM: pseudouridine synthase; PFAM: pseudouridine synthase; KEGG: gka:GK0831 hypothetical protein
YP_003252748.1	asymmetrical; catalyzes the formation of NTP and NMP from P(1),P(4)-bis(5'-nucleosyl) tetraphosphate; acts on bis(5'-guanosyl) tetraphosphate, bis(5'-xanthosyl)-tetraphosphate, on bis(5'-adenosyl)-tetraphosphate, and bis(5'-uridyl)-tetraphosphate
YP_003252749.1	PFAM: cell cycle protein; KEGG: gka:GK0833 stage V sporulation protein E
YP_003252750.1	TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; KEGG: gka:GK1987 transposase
YP_003252751.1	Catalyzes a key regulatory step in fatty acid biosynthesis
YP_003252752.1	KEGG: gka:GK0835 hypothetical protein
YP_003252753.1	PFAM: glycosyl transferase group 1; KEGG: gka:GK0836 lipopolysaccharide N-acetylglucosaminyltransferase
YP_003252754.1	TIGRFAM: spore coat protein, CotS family; PFAM: aminoglycoside phosphotransferase; KEGG: gka:GK0837 spore coat protein
YP_003252755.1	PFAM: glycosyl transferase group 1; KEGG: gka:GK0838 lipopolysaccharide N-acetylglucosaminyltransferase
YP_003252756.1	PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: gka:GK0839 NDP-sugar epimerase
YP_003252757.1	KEGG: gka:GK0840 NDP-sugar dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase ; FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_003252758.1	PFAM: glycosyl transferase group 1; KEGG: gka:GK0841 glycosyltransferase
YP_003252759.1	PFAM: aminoglycoside phosphotransferase; protein of unknown function DUF227; SMART: CHK kinase-like; KEGG: gka:GK0842 hypothetical protein
YP_003252760.1	KEGG: gka:GK0843 hypothetical protein
YP_003252761.1	PFAM: protein of unknown function DUF1360; KEGG: gka:GK0844 hypothetical protein
YP_003252762.1	KEGG: gka:GK0846 hypothetical protein
YP_003252763.1	KEGG: gka:GK0847 hypothetical protein
YP_003252764.1	KEGG: gka:GK0848  spore coat protein regulator protein YlbO
YP_003252765.1	KEGG: gka:GK0849 hypothetical protein
YP_003252766.1	KEGG: gka:GK0850 hypothetical protein
YP_003252767.1	PFAM: protein of unknown function DUF1657; KEGG: gka:GK0851 hypothetical protein
YP_003252768.1	KEGG: gka:GK0852 hypothetical protein
YP_003252769.1	TIGRFAM: stage V sporulation protein AC; PFAM: SpoVA protein; KEGG: gka:GK0853 stage V sporulation protein AC
YP_003252770.1	TIGRFAM: stage V sporulation protein AD; PFAM: stage V sporulation AD family protein; KEGG: gka:GK0854 stage V sporulation protein AD
YP_003252771.1	TIGRFAM: stage V sporulation protein AE; PFAM: SpoVA protein; KEGG: gka:GK0855 stage V sporulation protein AE
YP_003252772.1	PFAM: protein of unknown function DUF1657; KEGG: gka:GK0856 hypothetical protein
YP_003252773.1	PFAM: protein of unknown function DUF421; protein of unknown function DUF1657; KEGG: gka:GK0857 hypothetical protein
YP_003252774.1	KEGG: gka:GK0858 hypothetical protein
YP_003252775.1	PFAM: thioredoxin domain; KEGG: gka:GK0859 thioredoxin
YP_003252776.1	KEGG: gka:GK0860 hypothetical protein
YP_003252777.1	PFAM: conserved hypothetical protein; KEGG: gka:GK0861 hypothetical protein
YP_003252778.1	KEGG: gka:GK0862 hypothetical protein
YP_003252779.1	PFAM: GCN5-related N-acetyltransferase; KEGG: gka:GK0863 hypothetical protein
YP_003252780.1	similar to 2'-5' RNA ligase
YP_003252781.1	PFAM:  esterase; KEGG: gka:GK0865 hypothetical protein
YP_003252782.1	catalyzes the formation of cysteine from cystathionine; in B. subtilis also has O-acetylhomoserine thiolyase activity
YP_003252783.1	catalyzes the formation of L-homocysteine from cystathionine
YP_003252784.1	PFAM: metal-dependent phosphohydrolase HD sub domain; histidine kinase HAMP region domain protein; SMART: metal-dependent phosphohydrolase HD region; KEGG: afl:Aflv_0276 sensory protein with an HD-GYP output domain
YP_003252785.1	PFAM: transposase IS4 family protein; KEGG: gwc:GWCH70_2824 transposase IS4 family protein
YP_003252786.1	KEGG: pjd:Pjdr2_2807 hypothetical protein
YP_003252787.1	restriction endonuclease; the EcoKI enzyme recognizes 5'-AACN(6)GTGC-3'; subunit R is required for both nuclease and ATPase activities
YP_003252788.1	PFAM: N-6 DNA methylase; KEGG: gtn:GTNG_0762 type I restriction enzyme StySPI M protein
YP_003252789.1	PFAM: restriction modification system DNA specificity domain; KEGG: bca:BCE_0842 type I restriction-modification enzyme, S subunit
YP_003252790.1	PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: bsu:BSU03440 methyl-accepting chemotaxis protein
YP_003252791.1	PFAM: transglycosylase; KEGG: gwc:GWCH70_1716 transglycosylase
YP_003252792.1	KEGG: gka:GK0889 hypothetical protein
YP_003252793.1	PFAM: Uncharacterised protein family UPF0324; KEGG: gka:GK0890 hypothetical protein
YP_003252794.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: gwc:GWCH70_1713 LysR family transcriptional regulator
YP_003252795.1	PFAM: multicopper oxidase type 3; multicopper oxidase type 1; multicopper oxidase type 2; KEGG: aac:Aaci_1111 multicopper oxidase type 3
YP_003252796.1	SMART: ATPase AAA; KEGG: gwc:GWCH70_3192 ATPase AAA
YP_003252797.1	PFAM: transposase IS4 family protein; KEGG: gka:GK2942 hypothetical protein
YP_003252798.1	KEGG: gka:GK0893 hypothetical protein
YP_003252799.1	PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: gka:GK0894 menaquinol-cytochrome C reductase iron-sulfur subunit
YP_003252800.1	PFAM: protein of unknown function DUF156; KEGG: gwc:GWCH70_1700 protein of unknown function DUF156
YP_003252801.1	TIGRFAM: copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper ion binding protein; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: gka:GK0902 heavy metal-transporting ATPase
YP_003252802.1	TIGRFAM: copper ion binding protein; PFAM: Heavy metal transport/detoxification protein; KEGG: gka:GK0903 mercuric ion-binding protein
YP_003252803.1	PFAM: DNA polymerase III subunit beta; KEGG: gwc:GWCH70_0862 DNA polymerase III subunit beta
YP_003252804.1	PFAM: multicopper oxidase type 2; multicopper oxidase type 1; KEGG: gka:GK0904 multicopper oxidase
YP_003252805.1	KEGG: gka:GK0905 hypothetical protein
YP_003252806.1	TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferase class-II; KEGG: gka:GK0906 asparagine synthetase
YP_003252807.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gka:GK0907 two-component sensor histidine kinase
YP_003252808.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: gka:GK0908 two-component response regulator
YP_003252809.1	PFAM: ABC transporter; KEGG: gka:GK0909 ABC transporter (permease)
YP_003252810.1	KEGG: gka:GK0910 ABC transporter ATP-binding protein; TIGRFAM: daunorubicin resistance ABC transporter ATPase; PFAM: ABC transporter; SMART: ATPase AAA
YP_003252811.1	Catalyzes the rate-limiting step in dNTP synthesis
YP_003252812.1	PFAM: ribonucleotide reductase; KEGG: gka:GK0912 ribonucleoside-diphosphate reductase subunit beta
YP_003252813.1	PFAM: AIG2 family protein; KEGG: gtn:GTNG_0802 hypothetical protein
YP_003252814.1	PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: gka:GK0913 hypothetical protein
YP_003252815.1	PFAM: ferredoxin; KEGG: gka:GK0914 hypothetical protein
YP_003252816.1	KEGG: gka:GK0915 hypothetical protein
YP_003252817.1	PFAM: Linocin_M18 bacteriocin protein; KEGG: gka:GK0916 hypothetical protein
YP_003252818.1	KEGG: gka:GK0917 hypothetical protein
YP_003252820.1	PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: gtn:GTNG_0806  transporter
YP_003252821.1	PFAM: ornithine cyclodeaminase/mu-crystallin; shikimate/quinate 5-dehydrogenase; KEGG: gtn:GTNG_0807 ornithine cyclodeaminase/mu-crystallin family protein
YP_003252822.1	catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis
YP_003252823.1	PFAM: diacylglycerol kinase; SMART: diacylglycerol kinase; KEGG: gka:GK0919 hypothetical protein
YP_003252824.1	PFAM: protein of unknown function DUF1212; KEGG: gka:GK0922 hypothetical protein
YP_003252825.1	KEGG: gka:GK0923 hypothetical protein
YP_003252826.1	TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: gka:GK0924 amidohydrolase
YP_003252827.1	PFAM: GCN5-related N-acetyltransferase; KEGG: gka:GK0925 hypothetical protein
YP_003252828.1	PFAM: mandelate racemase/muconate lactonizing protein; KEGG: gka:GK0926 N-acylamino acid racemase
YP_003252829.1	TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: gka:GK0928 sodium:solute symporter
YP_003252830.1	PFAM: protein of unknown function DUF485; KEGG: gka:GK0929 hypothetical protein
YP_003252831.1	PFAM: amino acid permease-associated region; KEGG: gka:GK0930 amino acid transporter
YP_003252832.1	TIGRFAM: transposase, IS605 OrfB family; PFAM:  transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB; KEGG: gka:GK2101 transposase
YP_003252833.1	PFAM: small acid-soluble spore protein alpha/beta type; KEGG: gka:GK0934 small acid-soluble spore protein (minor alpha/beta-type SASP)
YP_003252834.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: gtn:GTNG_0822 transcriptional regulator
YP_003252835.1	PFAM: Amylo-alpha-16-glucosidase; KEGG: gtn:GTNG_0823 hypothetical protein
YP_003252836.1	PFAM: extracellular solute-binding protein family 1; KEGG: gtn:GTNG_0824 sugar transporter sugar-binding protein
YP_003252837.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gtn:GTNG_0825 sugar transporter permease
YP_003252838.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gtn:GTNG_0826 sugar transporter permease
YP_003252839.1	PFAM: major facilitator superfamily MFS_1; KEGG: gka:GK0937 multidrug resistance protein
YP_003252841.1	KEGG: gka:GK0939 hypothetical protein
YP_003252842.1	KEGG: gka:GK0940 hypothetical protein
YP_003252843.1	KEGG: gka:GK0941 hypothetical protein
YP_003252844.1	PFAM: cobalamin B12-binding domain protein; radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: gka:GK0942 Mg-protoporphyrin IX monomethyl ester oxidative cyclase
YP_003252845.1	KEGG: gka:GK0944 two-component sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; hypothetical protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein
YP_003252846.1	KEGG: gka:GK0945 methylated-DNA-protein-cysteine S-methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding
YP_003252847.1	PFAM: inner-membrane translocator; KEGG: gka:GK0946 ribose ABC transporter (permease)
YP_003252848.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK0947 ribose ABC transporter ATP-binding protein
YP_003252849.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: gka:GK0948 ribose ABC transporter (substrate-binding protein)
YP_003252850.1	isomerizes methylthioribose-1-phosphate into methylthioribulose-1-phosphate; involved in methionine salvage pathway
YP_003252851.1	phosphorylates methylthioribose to form methylthioribose-1-phosphate; involved in methionine salvage pathway
YP_003252852.1	PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: gka:GK0951 hypothetical protein
YP_003252853.1	produces methionine from 2-keto-4-methylthiobutyrate and glutamine in vitro; mutations do not affect methionine salvage in vivo however
YP_003252854.1	converts 2,3-diketo-5-methylthiopentyl-1-phosphate into 2-hydroxy 3-keto-5-methylthiopentenyl-1-phosphate; involved in methionine salvage
YP_003252855.1	converts 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate to 1,2-dihydroxy-3-keto-5-methylthiopentene; involved in methionine salvage
YP_003252856.1	converts methylthioribulose-1-phosphate into 2,3-diketo-5-methylthiopentyl-1-phosphate; involved in methionine salvage
YP_003252857.1	PFAM: acireductone dioxygenase; Cupin 2 conserved barrel domain protein; KEGG: gka:GK0956 methionine salvage pathway enzyme E-2/E-2'
YP_003252858.1	PFAM: zinc/iron permease; KEGG: gka:GK0957 divalent heavy-metal cation transporter
YP_003252859.1	PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: gka:GK0958 MarR family transcriptional regulator
YP_003252860.1	PFAM: propanediol utilization protein; KEGG: gka:GK0959 hypothetical protein
YP_003252861.1	KEGG: gtn:GTNG_0848 short chain dehydrogenase
YP_003252862.1	PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; hypothetical protein; KEGG: gka:GK0961 acylaminoacyl-peptidase
YP_003252863.1	PFAM: amino acid permease-associated region; KEGG: gka:GK0962 amino acid ABC transporter (permease)
YP_003252864.1	TIGRFAM: oligoendopeptidase, M3 family; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: gka:GK0963 oligoendopeptidase F
YP_003252865.1	PFAM: FR47 domain protein; GCN5-related N-acetyltransferase; KEGG: gka:GK0964 hypothetical protein
YP_003252866.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gtn:GTNG_0853 ABC transporter ATP-binding protein
YP_003252867.1	PFAM: ABC transporter; KEGG: gtn:GTNG_0854 ABC transporter (permease)
YP_003252868.1	PFAM: regulatory protein TetR; KEGG: gtn:GTNG_0855 TetR family transcriptional regulator
YP_003252869.1	PFAM: DNA polymerase III subunit beta; KEGG: gka:GK0965 hypothetical protein
YP_003252870.1	KEGG: gka:GK0966 hypothetical protein
YP_003252871.1	KEGG: gka:GK0967 hypothetical protein
YP_003252872.1	PFAM: ATPase AAA; Clp ATPase-like; AAA ATPase central domain protein; UvrB/UvrC protein; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: gtn:GTNG_0856 ATP-dependent Clp protease-like (class III stress gene)
YP_003252873.1	KEGG: gka:GK0969 hypothetical protein
YP_003252874.1	KEGG: gka:GK0970 hypothetical protein
YP_003252875.1	PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: gka:GK0971 hypothetical protein
YP_003252876.1	PFAM: GerA spore germination protein; KEGG: gka:GK0972 spore germination protein
YP_003252877.1	TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: gka:GK0973 spore germination protein
YP_003252878.1	TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: gka:GK0974 spore germination protein
YP_003252879.1	TIGRFAM: exsB protein; PFAM: Queuosine synthesis-like; PP-loop domain protein; KEGG: gka:GK0975 aluminum resistance protein
YP_003252880.1	PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: gka:GK0976 6-pyruvoyl tetrahydrobiopterin synthase
YP_003252881.1	TIGRFAM: 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE; PFAM: radical SAM protein; KEGG: gka:GK0977 coenzyme PQQ synthesis
YP_003252882.1	NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis
YP_003252883.1	KEGG: gka:GK0979 semialdehyde dehydrogenase
YP_003252884.1	PFAM: protein of unknown function DUF2187; KEGG: gtn:GTNG_0868 hypothetical protein
YP_003252885.1	PFAM: cell wall hydrolase SleB; peptidoglycan-binding lysin domain; SMART: peptidoglycan-binding LysM; KEGG: gka:GK0981 spore cortex-lytic enzyme
YP_003252886.1	KEGG: gka:GK0982 hypothetical protein
YP_003252887.1	KEGG: gka:GK0983 hypothetical protein
YP_003252888.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: gka:GK0984 short chain alcohol dehydrogenase
YP_003252889.1	KEGG: gka:GK0985 hypothetical protein
YP_003252890.1	KEGG: gka:GK0986 two-component sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; hypothetical protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein
YP_003252891.1	PFAM: sodium/hydrogen exchanger; KEGG: gka:GK0987 proton/sodium antiporter
YP_003252892.1	KEGG: gka:GK0988 hypothetical protein
YP_003252893.1	PFAM: CAT RNA-binding domain protein; PRD domain protein; KEGG: gka:GK0990 transcription antiterminator
YP_003252894.1	KEGG: gka:GK0991 PTS system, glucose-specific enzyme II, A component; TIGRFAM: PTS system, glucose-specific IIBC subunit; PTS system, glucose subfamily, IIsubunit alpha; PTS system, glucose-like IIB subunint; PTS system, maltose and glucose-specific subfamily, IIC subunit; PFAM: phosphotransferase system EIIC; sugar-specific permease EIIA 1 domain; phosphotransferase system EIIB/cysteine, phosphorylation site
YP_003252895.1	TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: gka:GK0995 phosphocarrier protein HPr
YP_003252896.1	KEGG: gka:GK0996 phosphoenolpyruvate-protein phosphotransferase; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; PEP-utilising protein mobile region
YP_003252897.1	KEGG: chy:CHY_1899 hypothetical protein
YP_003252898.1	PFAM: peptidoglycan-binding protein; KEGG: chy:CHY_1900  peptidoglycan binding protein
YP_003252899.1	PFAM: GCN5-related N-acetyltransferase; KEGG: gka:GK1018 hypothetical protein
YP_003252900.1	KEGG: gka:GK1019 hypothetical protein
YP_003252901.1	PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: gka:GK1020 methyl-accepting chemotaxis protein
YP_003252902.1	SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide
YP_003252903.1	component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA
YP_003252904.1	KEGG: gka:GK1025 hypothetical protein
YP_003252905.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gka:GK1026 3-oxoacyl-(acyl carrier protein) reductase
YP_003252906.1	PFAM: 6-phosphogluconate dehydrogenase NAD-binding; NADP oxidoreductase coenzyme F420-dependent; KEGG: gka:GK1027 3-hydroxyisobutyrate dehydrogenase
YP_003252907.1	PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: gka:GK1028 acyl-CoA dehydrogenase
YP_003252908.1	Involved in the nonphosphorylative, ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate
YP_003252909.1	PFAM: AMP-dependent synthetase and ligase; KEGG: gka:GK1030 long-chain fatty-acid-CoA ligase
YP_003252910.1	PFAM: regulatory protein TetR; KEGG: gka:GK1031 TetR/AcrR family transcriptional regulator
YP_003252911.1	PFAM: aminoglycoside phosphotransferase; KEGG: gka:GK1032 hypothetical protein
YP_003252912.1	PFAM: 2-phosphosulfolactate phosphatase; KEGG: gka:GK1033 hypothetical protein
YP_003252913.1	PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: gka:GK1034 NADPH:quinone oxidoreductase
YP_003252914.1	KEGG: gka:GK1903 transposase
YP_003252915.1	PFAM: aminotransferase class I and II; KEGG: gka:GK1035 aminotransferase A
YP_003252916.1	PFAM: conserved hypothetical protein; KEGG: gka:GK1036 hypothetical protein
YP_003252917.1	TIGRFAM: magnesium and cobalt transporter CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: gka:GK1037 divalent cation transporter
YP_003252918.1	PFAM: Domain of unknown function DUF1906; KEGG: gka:GK1038 hypothetical protein
YP_003252919.1	KEGG: gka:GK1039 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; SMART: GGDEF domain containing protein; response regulator receiver
YP_003252920.1	KEGG: gka:GK1040 hypothetical protein
YP_003252921.1	PFAM: glycosyl transferase family 2; chitin synthase; KEGG: gka:GK1041 hypothetical protein
YP_003252922.1	KEGG: gka:GK1042 hypothetical protein
YP_003252923.1	PFAM: metallophosphoesterase; KEGG: gka:GK1043 hypothetical protein
YP_003252924.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gka:GK1044 short chain dehydrogenase
YP_003252925.1	PFAM: EAL-like; EAL domain protein; SMART: EAL domain protein; KEGG: gka:GK1045 hypothetical protein
YP_003252926.1	KEGG: gtn:GTNG_0906 hypothetical protein
YP_003252927.1	KEGG: gka:GK1047 hypothetical protein
YP_003252928.1	PFAM: hypothetical protein; KEGG: gka:GK1048 hypothetical protein
YP_003252929.1	TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; PFAM: Tetrahydrodipicolinate succinyltransferase domain protein; transferase; KEGG: gka:GK1049 tetrahydrodipicolinate succinylase
YP_003252930.1	KEGG: gka:GK1050 hippurate hydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein
YP_003252931.1	PFAM: protein of unknown function UPF0180; KEGG: gka:GK1051 hypothetical protein
YP_003252932.1	PFAM: TrkA-N domain protein; TrkA-C domain protein; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: gka:GK1052 potassium transporter NAD-binding component
YP_003252933.1	PFAM: beta-lactamase; RNA-metabolising metallo-beta-lactamase; KEGG: gka:GK1053 hypothetical protein
YP_003252934.1	PFAM: protein of unknown function DUF1447; KEGG: gka:GK1054 hypothetical protein
YP_003252936.1	TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase type 3; haloacid dehalogenase; sucrose-6F-phosphate phosphohydrolase; KEGG: gka:GK1056 hypothetical protein
YP_003252937.1	cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+)
YP_003252938.1	KEGG: gka:GK1058 dehydrogenase E1 component, alpha subunit (lipoamide); TIGRFAM: pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha; PFAM: dehydrogenase E1 component
YP_003252939.1	PFAM: transketolase; transketolase domain protein; KEGG: gka:GK1059 dehydrogenase E1 component subunit beta (lipoamide)
YP_003252940.1	PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; KEGG: gka:GK1060 branched-chain alpha-keto acid dehydrogenase subunit E2
YP_003252941.1	E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide
YP_003252942.1	KEGG: gka:GK1062 hypothetical protein
YP_003252943.1	PFAM: Domain of unknown function DUF1885; KEGG: gka:GK1063 hypothetical protein
YP_003252944.1	PFAM: Orn/Lys/Arg decarboxylase major region; Soluble liver antigen/liver pancreas antigen; Orn/Lys/Arg decarboxylase domain protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: gka:GK1065 lysine decarboxylase (LDC)
YP_003252945.1	PFAM: 2-nitropropane dioxygenase NPD; KEGG: gka:GK1066 hypothetical protein
YP_003252946.1	KEGG: gka:GK1067 hypothetical protein
YP_003252947.1	PFAM: inositol monophosphatase; KEGG: gka:GK1068 myo-inositol-1(or 4)-monophosphatase (inositol-1-phosphatase) (I-1-Pase)
YP_003252948.1	KEGG: gka:GK1069 hypothetical protein
YP_003252949.1	TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; Miro domain protein; elongation factor Tu domain 2 protein; KEGG: gka:GK1070 GTP-binding elongation factor EF-G
YP_003252950.1	KEGG: gka:GK1071 hypothetical protein
YP_003252951.1	KEGG: gka:GK1072 hypothetical protein
YP_003252952.1	PFAM: protein of unknown function DUF2197; KEGG: gka:GK1073 hypothetical protein
YP_003252953.1	TIGRFAM: sporulation lipoprotein, YhcN/YlaJ family; PFAM: sporulation lipoprotein YhcN/YlaJ-like; KEGG: gka:GK1074 hypothetical protein
YP_003252954.1	PFAM: PhoH family protein; SMART: nucleotide binding protein PINc; KEGG: gka:GK1075 phosphate starvation-induced protein
YP_003252955.1	KEGG: gka:GK1076 hypothetical protein
YP_003252956.1	depletion of this protein in Bacillus subtilis results in defects in cell morphology; crystal structure of Staphylococcus protein shows homodimer; ligand binding protein
YP_003252957.1	PFAM: cell cycle protein; KEGG: gka:GK1078 cell-division protein
YP_003252958.1	biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate
YP_003252959.1	PFAM: cytochrome oxidase assembly; KEGG: gka:GK1080 heme O oxygenase
YP_003252960.1	converts protoheme IX and farnesyl diphosphate to heme O
YP_003252961.1	TIGRFAM: cytochrome C oxidase subunit II; PFAM: cytochrome C class I; cytochrome C oxidase subunit II; cytochrome C oxidase subunit II transmembrane region; KEGG: gka:GK1082 cytochrome C oxidase subunit II
YP_003252962.1	KEGG: gka:GK1083 cytochrome C oxidase subunit I; TIGRFAM: cytochrome C oxidase subunit I; PFAM: cytochrome C oxidase subunit I
YP_003252963.1	PFAM: cytochrome C oxidase subunit III; KEGG: gka:GK1084 cytochrome C oxidase subunit III
YP_003252964.1	KEGG: gka:GK1085 cytochrome C oxidase subunit IV; TIGRFAM: cytochrome C oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV
YP_003252965.1	TIGRFAM: cytochrome C oxidase assembly factor CtaG; PFAM: cytochrome C oxidase caa3-type, assembly factor CtaG-related; KEGG: gka:GK1086 hypothetical protein
YP_003252966.1	PFAM: protein of unknown function DUF420; KEGG: gka:GK1087 hypothetical protein
YP_003252967.1	KEGG: gka:GK1088 hypothetical protein
YP_003252968.1	PFAM: protein of unknown function YugN-like; KEGG: gka:GK1089 hypothetical protein
YP_003252969.1	PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: gka:GK1090 hypothetical protein
YP_003252970.1	PFAM: SCP-like extracellular; KEGG: gka:GK1091 hypothetical protein
YP_003252971.1	KEGG: gka:GK1092 hypothetical protein
YP_003252972.1	KEGG: gka:GK1093 hypothetical protein
YP_003252973.1	KEGG: gka:GK1094 hypothetical protein
YP_003252974.1	PFAM: protein of unknown function DUF1333; KEGG: gka:GK1095 hypothetical protein
YP_003252975.1	PFAM: Uncharacterised protein family UPF0298; KEGG: gka:GK1096 hypothetical protein
YP_003252976.1	KEGG: gka:GK1097 hypothetical protein
YP_003252977.1	TIGRFAM: methyltransferase; PFAM: protein of unknown function methylase KEGG: gka:GK1098 hypothetical protein
YP_003252978.1	Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA
YP_003252979.1	TIGRFAM: sporulation integral membrane protein YlbJ; PFAM: nucleoside recognition domain protein; KEGG: gka:GK1100 hypothetical protein
YP_003252980.1	PFAM: patatin; KEGG: gka:GK1101 hypothetical protein
YP_003252981.1	SMART: PDZ/DHR/GLGF domain protein; KEGG: gka:GK1102 hypothetical protein
YP_003252982.1	PFAM: protein of unknown function DUF795; KEGG: gka:GK1103 hypothetical protein
YP_003252983.1	PFAM: protein of unknown function DUF177; KEGG: gka:GK1104 hypothetical protein
YP_003252984.1	some L32 proteins have zinc finger motifs consisting of CXXC while others do not
YP_003252985.1	PFAM: enoyl-CoA hydratase/isomerase; KEGG: gka:GK1106 enoyl-CoA hydratase
YP_003252986.1	TIGRFAM: transcription factor, RsfA family; SMART: Myb DNA-binding domain protein; KEGG: gka:GK1107 hypothetical protein
YP_003252987.1	Ketopantoate reductase; catalyzes the NADPH reduction of Ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis
YP_003252988.1	KEGG: gka:GK1109 hypothetical protein
YP_003252989.1	PFAM: protein of unknown function UCP012535; KEGG: gka:GK1110 hypothetical protein
YP_003252990.1	TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: gka:GK1111 S-adenosyl-methyltransferase MraW
YP_003252991.1	TIGRFAM: cell division protein FtsL; PFAM: septum formation initiator; KEGG: gka:GK1112 cell division protein
YP_003252992.1	KEGG: gka:GK1113 penicillin-binding protein 2B; PFAM: penicillin-binding protein transpeptidase; PASTA domain containing protein; Penicillin-binding protein dimerisation domain; SMART: PASTA domain containing protein
YP_003252993.1	KEGG: gka:GK1114 penicillin-binding protein (sporulation specific penicillin-binding protein); TIGRFAM: stage V sporulation protein D; PFAM: penicillin-binding protein transpeptidase; PASTA domain containing protein; Penicillin-binding protein dimerisation domain; SMART: PASTA domain containing protein
YP_003252994.1	involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate
YP_003252995.1	KEGG: gka:GK1116 hypothetical protein
YP_003252996.1	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
YP_003252997.1	UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation
YP_003252998.1	TIGRFAM: stage V sporulation protein E; cell division protein FtsW; rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: gka:GK1119 stage V sporulation protein E
YP_003252999.1	PFAM: cell division protein FtsQ; polypeptide-transport-associated domain protein FtsQ-type; KEGG: gka:GK1120 cell-division initiation protein (septum formation)
YP_003253000.1	PFAM: protein of unknown function DUF881; KEGG: gka:GK1121 hypothetical protein
YP_003253001.1	PFAM: protein of unknown function DUF881; KEGG: gka:GK1122 hypothetical protein
YP_003253002.1	PFAM: protein of unknown function DUF1290; KEGG: gka:GK1123 small basic protein
YP_003253003.1	TIGRFAM: cell division protein FtsA; PFAM: cell division protein FtsA; KEGG: gka:GK1124 cell division protein (septum formation)
YP_003253004.1	GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function
YP_003253005.1	TIGRFAM: sigma-E processing peptidase SpoIIGA; PFAM: peptidase U4 sporulation factor SpoIIGA; KEGG: gka:GK1126 protease (sporulation sigma-E factor processing peptidase)
YP_003253006.1	sigma-29; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the mother cell at the onset of sporulation
YP_003253007.1	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed after engulfment; this factor is involved in the transcription of small acid-soluble proteins involved in protecting the forespore chromatin
YP_003253008.1	TIGRFAM: sporulation protein, YlmC/YmxH family; PFAM: PRC-barrel domain protein; KEGG: gtn:GTNG_0994 hypothetical protein
YP_003253009.1	PFAM: protein of unknown function DUF152; KEGG: gka:GK1130 hypothetical protein
YP_003253010.1	PFAM: alanine racemase domain protein; KEGG: gka:GK1131 hypothetical protein
YP_003253011.1	PFAM: protein of unknown function DUF552; KEGG: gka:GK1132 hypothetical protein
YP_003253012.1	PFAM: protein of unknown function YGGT; KEGG: gka:GK1133 hypothetical protein
YP_003253013.1	PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: gka:GK1134 hypothetical protein
YP_003253014.1	TIGRFAM: DivIVA domain; PFAM: DivIVA family protein; KEGG: gka:GK1135 cell-division initiation protein (septum placement)
YP_003253015.1	IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme
YP_003253016.1	lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis
YP_003253017.1	KEGG: gka:GK1146 hypothetical protein; TIGRFAM: pseudouridine synthase; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein
YP_003253018.1	regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity
YP_003253019.1	TIGRFAM: uracil-xanthine permease; PFAM: xanthine/uracil/vitamin C permease; KEGG: gka:GK1148 uracil transporter
YP_003253020.1	catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis
YP_003253021.1	catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis
YP_003253022.1	catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers
YP_003253023.1	four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity
YP_003253024.1	responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the pyrD subunit to the ultimate electron acceptor NAD(+)
YP_003253025.1	catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway, using a flavin nucleotide as an essential cofactor; subclass 1B is a heterotetramer consisting of two PyrDB subunits, similar to the PyrDsubunit alphas and two PyrK subunits
YP_003253026.1	type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase
YP_003253027.1	involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate
YP_003253028.1	KEGG: gka:GK1903 transposase
YP_003253029.1	PFAM: transposase IS4 family protein; KEGG: gka:GK1010 transposase
YP_003253030.1	PFAM: transposase IS4 family protein; KEGG: afl:Aflv_2105 transposase
YP_003253033.1	PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; protein of unknown function DUF201; phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; KEGG: sen:SACE_6330  fusion protein (ligase/carboxylase and argininosuccinate lyase
YP_003253034.1	PFAM: GCN5-related N-acetyltransferase; KEGG: cgt:cgR_2680 hypothetical protein
YP_003253035.1	PFAM: major facilitator superfamily MFS_1; KEGG: bha:BH3886 multidrug-efflux transporter
YP_003253036.1	TIGRFAM: beta-phosphoglucomutase; beta-phosphoglucomutase family hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase; KEGG: cac:CAC2614 beta-phosphoglucomutase
YP_003253037.1	TIGRFAM: hypothetical protein; PFAM: YD repeat-containing protein; KEGG: gka:GK0782 hypothetical protein
YP_003253038.1	KEGG: gka:GK0787 hypothetical protein
YP_003253039.1	KEGG: gka:GK1160 hypothetical protein
YP_003253040.1	PFAM: PilT protein domain protein; KEGG: afl:Aflv_2624 PIN domain protein
YP_003253041.1	PFAM: protein of unknown function DUF820; KEGG: gka:GK1162 hypothetical protein
YP_003253042.1	PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; KEGG: gka:GK1163 fibronectin/fibrinogen-binding protein
YP_003253044.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: gka:GK1164 calcium-transporting ATPase
YP_003253045.1	PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: gka:GK1165 hypothetical protein
YP_003253046.1	PFAM: protein of unknown function DUF370; KEGG: gka:GK1166 hypothetical protein
YP_003253047.1	Essential for recycling GMP and indirectly, cGMP
YP_003253048.1	Promotes RNA polymerase assembly; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and subunit alphas
YP_003253049.1	KEGG: gka:GK1169 pantothenate metabolism flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein
YP_003253050.1	binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity
YP_003253051.1	cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+)
YP_003253052.1	TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: gka:GK1172 methionyl-tRNA formyltransferase
YP_003253053.1	TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: gka:GK1173 RNA-binding Sun protein
YP_003253054.1	23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance
YP_003253055.1	KEGG: gka:GK1175 serine/threonine phosphatase; PFAM: protein phosphatase 2C-like; stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein
YP_003253056.1	PFAM: serine/threonine protein kinase-related; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase; tyrosine protein kinase; PASTA domain containing protein; KEGG: gka:GK1176 serine/threonine protein kinase
YP_003253057.1	EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity
YP_003253058.1	catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate
YP_003253059.1	KEGG: gka:GK1179 thiamin pyrophosphokinase; TIGRFAM: thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase catalytic region; Thiamin pyrophosphokinase vitamin B1-binding region
YP_003253060.1	involved in the production of the spore cortex and coat
YP_003253061.1	required for 70S ribosome assembly
YP_003253062.1	PFAM: protein of unknown function DUF322; KEGG: gka:GK1182 hypothetical protein
YP_003253063.1	TIGRFAM: DAK2 domain fusion protein YloV; PFAM: Dak phosphatase; KEGG: gka:GK1183 hypothetical protein
YP_003253064.1	KEGG: gka:GK1184 L-serine dehydratase (L-serine deaminase) beta chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, subunit beta; PFAM: serine dehydratase beta chain; amino acid-binding ACT domain protein
YP_003253065.1	KEGG: gka:GK1185 L-serine dehydratase (L-serine deaminase) alpha chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, subunit alpha; PFAM: serine dehydratase alpha chain
YP_003253066.1	catalyzes branch migration in Holliday junction intermediates
YP_003253068.1	negative regulator of genes involved in fatty acid and phospholipid biosynthesis for gram positive bacteria
YP_003253069.1	involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY
YP_003253070.1	TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase; KEGG: gka:GK1189 acyl-carrier-protein S-malonyltransferase
YP_003253071.1	catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
YP_003253072.1	carries the fatty acid chain in fatty acid biosynthesis
YP_003253073.1	cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity
YP_003253074.1	TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: gka:GK1193 chromosome segregation ATPase (SMC)
YP_003253075.1	KEGG: gka:GK1194 signal recognition particle GTPase (docking protein); TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase
YP_003253076.1	PFAM:  helix-turn-helix protein YlxM/p13 family protein; KEGG: gka:GK1195  DNA-binding protein
YP_003253077.1	KEGG: gka:GK1196 signal recognition particle GTPase; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: ATPase AAA
YP_003253078.1	binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity
YP_003253079.1	KEGG: gka:GK1198 RNA-binding protein
YP_003253080.1	KEGG: gka:GK1199 hypothetical protein
YP_003253081.1	TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; KEGG: gka:GK1646 transposase
YP_003253082.1	Essential for efficient processing of 16S rRNA
YP_003253083.1	methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA
YP_003253084.1	TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19; KEGG: gwc:GWCH70_1093 ribosomal protein L19
YP_003253085.1	KEGG: gka:GK1203 type I signal peptidase; TIGRFAM: signal peptidase I; PFAM: peptidase S24/S26A/S26B, conserved region
YP_003253086.1	essential GTPase; functions in ribosome assembly; binds a unique part of the 23S rRNA; interacts with ribosomal protein L25(Ctc)
YP_003253087.1	RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids
YP_003253088.1	KEGG: gka:GK1206 hypothetical protein
YP_003253089.1	KEGG: gka:GK1207 hypothetical protein
YP_003253090.1	catalyzes the interconversion of succinyl-CoA and succinate
YP_003253091.1	Catalyzes the only substrate-level phosphorylation in the TCA cycle
YP_003253092.1	TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: gka:GK1210 smf family DNA processing protein
YP_003253093.1	catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity
YP_003253094.1	site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs
YP_003253095.1	heat shock protein involved in degradation of misfolded proteins
YP_003253096.1	heat shock protein involved in degradation of misfolded proteins
YP_003253097.1	CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase (By similarity). It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
YP_003253098.1	with FlgF and C makes up the proximal portion of the flagellar basal body rod; Vibrio parahaemolyticus protein is associated with the polar flagella
YP_003253099.1	with FlgF and B makes up the proximal portion of the flagellar basal body rod
YP_003253100.1	forms a junction between the M-ring and FlgB during flagella biosynthesis
YP_003253101.1	the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod
YP_003253102.1	One of three proteins involved in switching the direction of the flagellar rotation
YP_003253103.1	binds to and inhibits the function of flagella specific ATPase FliI
YP_003253104.1	involved in type III protein export during flagellum assembly
YP_003253105.1	rod/hook and filament chaperone
YP_003253106.1	KEGG: gka:GK1224 hypothetical protein
YP_003253107.1	PFAM: flagellar hook-length control protein; KEGG: gka:GK1225 hypothetical protein
YP_003253108.1	acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod
YP_003253109.1	makes up the distal portion of the flagellar basal body rod
YP_003253110.1	PFAM: flagellar FlbD family protein; KEGG: gka:GK1228 hypothetical protein
YP_003253111.1	interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring
YP_003253112.1	with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation
YP_003253113.1	One of three proteins involved in switching the direction of the flagellar rotation
YP_003253114.1	PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: gtn:GTNG_1085 two-component response regulator
YP_003253115.1	structural component of the flagellum that anchors the rod to the membrane
YP_003253116.1	FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus
YP_003253117.1	with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus
YP_003253118.1	FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus
YP_003253119.1	membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export
YP_003253120.1	membrane protein involved in the flagellar export apparatus
YP_003253121.1	positive regulator of class III flagellar genes
YP_003253122.1	PFAM: cobyrinic acid ac-diamide synthase; KEGG: gka:GK1240 hypothetical protein
YP_003253123.1	regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins
YP_003253124.1	KEGG: gka:GK1242 two-component sensor histidine kinase (chemotaxis protein); PFAM: CheW domain protein; P2 response regulator binding domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; ATP-binding region ATPase domain protein; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein
YP_003253125.1	PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: gka:GK1243 chemotaxis signal transduction protein
YP_003253126.1	PFAM: CheC domain protein; KEGG: gka:GK1244 chemotactic methyltransferase inhibitor
YP_003253127.1	PFAM: CheD family protein; KEGG: gka:GK1245 chemoreceptor glutamine deamidase CheD
YP_003253128.1	expressed in late exponential phase; controls the expression of genes coding cell surface proteins involved in chemotaxis, flagellar assembly, and autolysis
YP_003253129.1	KEGG: gka:GK1247 hypothetical protein
YP_003253130.1	KEGG: gka:GK1248 hypothetical protein
YP_003253131.1	one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit
YP_003253132.1	EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu
YP_003253133.1	Catalyzes the phosphorylation of UMP to UDP
YP_003253134.1	Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs
YP_003253135.1	catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate
YP_003253136.1	PFAM: phosphatidate cytidylyltransferase; KEGG: gka:GK1254 CDP-diglyceride synthase(phosphatidate cytidylyltransferase)
YP_003253137.1	catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate
YP_003253138.1	KEGG: gka:GK1256 hypothetical protein; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein
YP_003253139.1	catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro)
YP_003253140.1	catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; required for leading strand synthesis; PolC exhibits 3' to 5' exonuclease activity
YP_003253141.1	in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins
YP_003253142.1	modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination
YP_003253143.1	PFAM: protein of unknown function DUF448; KEGG: gka:GK1261 hypothetical protein
YP_003253144.1	PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG: gka:GK1262 hypothetical protein
YP_003253145.1	Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
YP_003253146.1	PFAM: protein of unknown function DUF503; KEGG: gka:GK1264 hypothetical protein
YP_003253147.1	associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock
YP_003253148.1	catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs
YP_003253149.1	catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities
YP_003253150.1	primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence
YP_003253151.1	KEGG: gka:GK1269 polynucleotide phosphorylase/polyadenylase; TIGRFAM: polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; Exoribonuclease, phosphorolytic domain 2; K Homology, type 1, subgroup; SMART: KH domain protein
YP_003253152.1	PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: gwc:GWCH70_2089 transposase IS116/IS110/IS902 family protein
YP_003253153.1	TIGRFAM: sporulation protein, polysaccharide deacetylase family; PFAM: polysaccharide deacetylase; KEGG: gka:GK1270 deacetylase
YP_003253154.1	PFAM: peptidase M16 domain protein; KEGG: gka:GK1271 processing protease
YP_003253155.1	TIGRFAM: sporulation protein, YlmC/YmxH family; PFAM: PRC-barrel domain protein; KEGG: gka:GK1272 hypothetical protein
YP_003253156.1	catalyzes the synthesis of dipicolinic acid from dihydroxydipicolinic acid; plays a role in spore heat resistance
YP_003253157.1	involved in production of dipicolinic acid (pyridine-2,6-dicarboxylic acid, DPA) which is synthesized late in sporulation in the mother cell and accumulates in the spore; mutations in this gene result in a lack of DPA synthesis; presumably functions with SpoVFA to form the synthase enzyme
YP_003253158.1	catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde
YP_003253159.1	catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; diaminopimelate sensitive
YP_003253160.1	catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis
YP_003253161.1	PFAM: beta-lactamase; RNA-metabolising metallo-beta-lactamase; KEGG: gka:GK1278 hypothetical protein
YP_003253162.1	PFAM: peptidase S14 ClpP; KEGG: gka:GK1279 hypothetical protein
YP_003253163.1	KEGG: gka:GK1280 hypothetical protein
YP_003253164.1	PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: ATPase AAA; KEGG: gka:GK1281 DNA translocase (stage III sporulation protein E)
YP_003253165.1	PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: gka:GK1282 GntR family transcriptional regulator
YP_003253166.1	PFAM: basic membrane lipoprotein; KEGG: gka:GK1283 ABC transporter (lipoprotein)
YP_003253167.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK1284 ABC transporter ATP-binding protein
YP_003253168.1	PFAM: inner-membrane translocator; KEGG: gka:GK1285 sugar ABC transporter (permease)
YP_003253169.1	PFAM: inner-membrane translocator; KEGG: gka:GK1286 sugar ABC transporter (permease)
YP_003253170.1	PFAM: peptidase M16 domain protein; KEGG: gka:GK1287 hypothetical protein
YP_003253171.1	PFAM: peptidase M16 domain protein; KEGG: gka:GK1288 hypothetical protein
YP_003253172.1	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
YP_003253173.1	KEGG: gka:GK1290 hypothetical protein
YP_003253174.1	PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: gwc:GWCH70_2089 transposase IS116/IS110/IS902 family protein
YP_003253175.1	PFAM: amino acid-binding ACT domain protein; KEGG: gka:GK1291 hypothetical protein
YP_003253176.1	SMART: helix-turn-helix domain protein; KEGG: gka:GK1292 hypothetical protein
YP_003253177.1	KEGG: gka:GK1293 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (phosphatidylglycerophosphate synthase) (PGP synthase); TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase
YP_003253178.1	TIGRFAM: competence/damage-inducible protein CinA; molybdenum cofactor synthesis protein; PFAM: damage inducible protein CinA; molybdopterin binding domain; KEGG: gka:GK1294 competence damage-inducible protein A
YP_003253179.1	PFAM: RecA domain protein; KEGG: afl:Aflv_1530 RecA/RADA recombinase (multifunctional SOS repair regulator)
YP_003253180.1	PFAM: RNA-directed DNA polymerase (Reverse transcriptase); HNH endonuclease; KEGG: bcq:BCQ_PI219 reverse transcriptase
YP_003253181.1	TIGRFAM: recA protein; PFAM: RecA domain protein; KEGG: gtn:GTNG_1149 RecA2 protein
YP_003253183.1	PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: bbe:BBR47_58280  groupII intron-encoded protein
YP_003253184.1	protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP
YP_003253185.1	PFAM: metallophosphoesterase; KEGG: gka:GK1298 hypothetical protein
YP_003253186.1	PFAM: stage V sporulation protein S; KEGG: gka:GK1299 stage V sporulation protein S
YP_003253187.1	PFAM: peptidase M19 renal dipeptidase; KEGG: gtn:GTNG_1154 renal dipeptidase family protein
YP_003253188.1	PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate/ketoisovalerate oxidoreductase; KEGG: gka:GK1301 2-oxoglutarate synthase(2-oxoglutarate-ferredoxin oxidoreductase) alpha subunit
YP_003253189.1	catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin
YP_003253190.1	catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A)
YP_003253191.1	PFAM: protein of unknown function DUF1333; KEGG: gka:GK1304 hypothetical protein
YP_003253192.1	PFAM: Spore coat protein CotE; KEGG: gka:GK1305 outer spore coat protein
YP_003253193.1	This protein performs the mismatch recognition step during the DNA repair process
YP_003253194.1	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
YP_003253195.1	PFAM: NLP/P60 protein; peptidoglycan-binding lysin domain; SMART: peptidoglycan-binding LysM; KEGG: gka:GK1308 peptidoglycan hydrolase
YP_003253196.1	TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: gtn:GTNG_1163 glycine betaine transporter
YP_003253197.1	PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: gwc:GWCH70_2089 transposase IS116/IS110/IS902 family protein
YP_003253198.1	PFAM: major facilitator superfamily MFS_1; KEGG: gka:GK1310 multidrug resistance (MDR) efflux pump
YP_003253199.1	PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: gka:GK1311 methyl-accepting chemotaxis protein
YP_003253200.1	IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity
YP_003253201.1	Stimulates the elongation of poly(A) tails
YP_003253202.1	KEGG: gka:GK1314 spore formation protein; TIGRFAM: stage V sporulation protein K; PFAM: ATPase AAA; SMART: AAA ATPase
YP_003253203.1	activates fatty acids by binding to coenzyme A
YP_003253204.1	PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: gka:GK1316 acyl-CoA dehydrogenase
YP_003253205.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: gka:GK1317 acyl-CoA transferase/carnitine dehydratase
YP_003253206.1	PFAM: AMP-dependent synthetase and ligase; KEGG: gka:GK1318 medium-chain fatty acid-CoA ligase
YP_003253207.1	PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: gka:GK1319 3-hydroxybutyryl-CoA dehydrogenase
YP_003253208.1	TIGRFAM: acetyl-CoA acetyltransferase; PFAM: thiolase; KEGG: gka:GK1320 beta-ketothiolase (3-ketoacyl-CoA thiolase)
YP_003253209.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: gka:GK1322 hypothetical protein
YP_003253211.1	PFAM: protein of unknown function UPF0126; KEGG: gka:GK1323 hypothetical protein
YP_003253212.1	TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: gka:GK1324 GTP-binding protein protease modulator
YP_003253213.1	PFAM: aluminum resistance protein; Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: gka:GK1325 aluminum resistance protein
YP_003253214.1	PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: gka:GK1326 transcriptional repressor of glutamine synthetase
YP_003253215.1	KEGG: gka:GK1327 glutamine synthetase (glutamate-ammonia ligase); TIGRFAM: glutamine synthetase; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp
YP_003253216.1	Represses a number of genes involved in the response to DNA damage
YP_003253217.1	PFAM: peptidoglycan-binding lysin domain; KEGG: gka:GK1329 hypothetical protein
YP_003253218.1	PFAM: Resolvase domain; KEGG: gka:GK1330 resolvase
YP_003253219.1	PFAM: protein of unknown function DUF896; KEGG: gka:GK1331 hypothetical protein
YP_003253220.1	TIGRFAM: transketolase; PFAM: transketolase central region; transketolase; KEGG: gka:GK1332 transketolase
YP_003253221.1	KEGG: gka:GK1333 hypothetical protein
YP_003253222.1	PFAM: protein of unknown function UPF0154; KEGG: gka:GK1334 hypothetical protein
YP_003253223.1	PFAM: ABC transporter; ABC transporter transmembrane region; SMART: ATPase AAA; KEGG: gka:GK1335 ABC transporter ATP-binding protein
YP_003253224.1	PFAM: ABC transporter; ABC transporter transmembrane region; SMART: ATPase AAA; KEGG: gka:GK1336 ABC transporter ATP-binding protein
YP_003253225.1	PFAM: sporulation stage 0, Spo0E-like regulatory phosphatase; KEGG: gka:GK1337 hypothetical protein
YP_003253226.1	PFAM: cytochrome C biogenesis protein transmembrane region; KEGG: gka:GK1339 cytochrome C biogenesis protein
YP_003253227.1	PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: gka:GK1340 two-component response regulator
YP_003253228.1	PFAM: protein of unknown function DUF1453; KEGG: gka:GK1341 hypothetical protein
YP_003253229.1	KEGG: gka:GK1342 hypothetical protein
YP_003253230.1	PFAM: cell wall hydrolase SleB; peptidoglycan-binding lysin domain; SMART: peptidoglycan-binding LysM; KEGG: gka:GK1343 hypothetical protein
YP_003253231.1	PFAM: sigma-54 factor interaction domain-containing protein; PTS system fructose subfamily IIA component; ATPase associated with various cellular activities AAA_5; PRD domain protein; SMART: ATPase AAA; KEGG: gtn:GTNG_1199 regulatory protein
YP_003253232.1	KEGG: gtn:GTNG_1200 cellobiose phosphotransferase enzyme II'; TIGRFAM: PTS system, lactose/cellobiose family IIsubunit beta; PFAM: phosphotransferase system lactose/cellobiose-specific IIsubunit beta
YP_003253233.1	KEGG: gtn:GTNG_1201 cellobiose phosphotransferase enzyme II''; TIGRFAM: PTS system, cellobiose-specific IIC subunit; PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system EIIC
YP_003253234.1	PFAM: YdjC family protein; KEGG: gtn:GTNG_1202  phospho-beta-glucosidase
YP_003253235.1	TIGRFAM: PTS system, lactose-specific IIa component; PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIsubunit alpha; KEGG: gtn:GTNG_1202  phospho-beta-glucosidase
YP_003253236.1	SASP P; found in forespore compartment
YP_003253237.1	KEGG: gka:GK1345 hypothetical protein
YP_003253238.1	SASP O; found in forespore compartment
YP_003253239.1	Catalyzes the conversion of citrate to isocitrate
YP_003253240.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: gka:GK1350 hypothetical protein
YP_003253241.1	PFAM: ribonuclease H; KEGG: gka:GK1351 hypothetical protein
YP_003253242.1	PFAM: protein of unknown function DUF2602; KEGG: gtn:GTNG_1210 hypothetical protein
YP_003253243.1	KEGG: gtn:GTNG_1211 hypothetical protein
YP_003253244.1	PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: gtn:GTNG_1212 major cold shock protein CspB
YP_003253245.1	KEGG: gwc:GWCH70_1265 hypothetical protein
YP_003253246.1	PFAM: SpoOM family protein; KEGG: gka:GK1358 sporulation control protein
YP_003253247.1	TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: gka:GK1359 glycerol uptake facilitator
YP_003253248.1	Converts glycerol and ADP to glycerol-3-phosphate and ADP
YP_003253249.1	PFAM: transposase IS4 family protein; KEGG: gka:GK2942 hypothetical protein
YP_003253250.1	KEGG: gtn:GTNG_1218 hypothetical protein
YP_003253251.1	PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gka:GK1362 hypothetical protein
YP_003253252.1	PFAM: thioesterase superfamily protein; KEGG: gka:GK1363 hypothetical protein
YP_003253253.1	PFAM: thioesterase superfamily protein; KEGG: gka:GK1364 hypothetical protein
YP_003253254.1	TIGRFAM: formiminoglutamase; PFAM: arginase/agmatinase/formiminoglutamase; KEGG: gka:GK1365 formiminoglutamase
YP_003253255.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: gka:GK1366 hypothetical protein
YP_003253256.1	catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism
YP_003253257.1	catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway
YP_003253258.1	PFAM: nucleoside recognition domain protein; KEGG: gtn:GTNG_1227 hypothetical protein
YP_003253259.1	homopentamer; channel that opens in response to pressure or hypoosmotic shock
YP_003253260.1	PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: gka:GK1371 hypothetical protein
YP_003253261.1	PFAM: PfkB domain protein; KEGG: gtn:GTNG_1231 ribokinase family sugar kinase
YP_003253262.1	PFAM: indigoidine synthase A family protein; KEGG: gka:GK1373 hypothetical protein
YP_003253263.1	KEGG: gka:GK1374 hypothetical protein
YP_003253264.1	PFAM: SEC-C motif domain protein; KEGG: gka:GK1375 hypothetical protein
YP_003253265.1	PFAM: protein of unknown function DUF955; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: csc:Csac_2536 helix-turn-helix domain-containing protein
YP_003253266.1	KEGG: csc:Csac_2535 hypothetical protein
YP_003253267.1	PFAM: extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: gka:GK1376 hypothetical protein
YP_003253268.1	PFAM: ATPase associated with various cellular activities AAA_5; KEGG: gka:GK1378 hypothetical protein
YP_003253269.1	PFAM: Domain of unknown function DUF2357; protein of unknown function DUF524; KEGG: gka:GK1379 hypothetical protein
YP_003253270.1	KEGG: gwc:GWCH70_3101 hypothetical protein
YP_003253271.1	PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: gwc:GWCH70_3100 transcriptional regulator, XRE family
YP_003253272.1	PFAM: helicase; SNF2-related protein; SMART: helicase; DEAD-like helicase; KEGG: nth:Nther_0362 helicase
YP_003253273.1	KEGG: nth:Nther_0363 hypothetical protein
YP_003253274.1	PFAM: DNA methylase N-4/N-6 domain protein; KEGG: mes:Meso_0543 DNA methylase N-4/N-6
YP_003253275.1	PFAM: type III restriction protein res subunit; KEGG: cth:Cthe_0518 type III restriction enzyme, res subunit
YP_003253276.1	KEGG: gka:GK1389 hypothetical protein
YP_003253277.1	PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: gwc:GWCH70_2089 transposase IS116/IS110/IS902 family protein
YP_003253278.1	PFAM: acetamidase/Formamidase; KEGG: gka:GK1391 acetamidase/formamidase
YP_003253279.1	KEGG: gwc:GWCH70_1339 hypothetical protein
YP_003253280.1	PFAM: amidase; KEGG: gka:GK1392 glutamyl-tRNA(Gln) amidotransferase subunit A
YP_003253281.1	KEGG: gka:GK1394 hypothetical protein
YP_003253282.1	KEGG: gka:GK1395 hypothetical protein
YP_003253283.1	malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate
YP_003253284.1	PFAM: glycosyl transferase family 2; KEGG: cce:Ccel_1988 glycosyl transferase family 2
YP_003253285.1	PFAM: protein of unknown function UPF0302 ; conserved hypothetical protein; KEGG: gka:GK1398 hypothetical protein
YP_003253286.1	PFAM: FAD dependent oxidoreductase; KEGG: gka:GK1399 oxidoreductase
YP_003253287.1	PFAM: beta-lactamase; KEGG: gka:GK1401 hypothetical protein
YP_003253288.1	PFAM: protein of unknown function DUF975; KEGG: afl:Aflv_1654 predicted integral membrane protein
YP_003253289.1	KEGG: gka:GK1404 hypothetical protein
YP_003253290.1	PFAM: protein of unknown function DUF74; KEGG: gka:GK1405 hypothetical protein
YP_003253291.1	PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: gka:GK1406 ArsR family transcriptional regulator
YP_003253292.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: gka:GK1407 cation efflux transporter
YP_003253293.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: gka:GK1408 LysR family transcriptional regulator
YP_003253294.1	TIGRFAM: sulfite reductase [NADPH] flavoprotein, alpha chain; PFAM: FAD-binding domain protein; flavodoxin/nitric oxide synthase; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: gka:GK1409 sulfite reductase flavoprotein subunit
YP_003253295.1	hemoprotein; NADPH dependent; with the subunit alpha (a flavoprotein) catalyzes the reduction of sulfite to sulfide
YP_003253296.1	KEGG: gtn:GTNG_1271 aldehyde dehydrogenase
YP_003253297.1	catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
YP_003253298.1	KEGG: pla:Plav_2389 hypothetical protein
YP_003253299.1	PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bld:BLi02175 YcgE
YP_003253300.1	KEGG: gka:GK1414 hypothetical protein
YP_003253301.1	SMART: ATPase AAA; KEGG: gka:GK1415 hypothetical protein
YP_003253302.1	PFAM: DNA methylase N-4/N-6 domain protein; KEGG: gka:GK1416 type III restriction-modification system, methyltransferase
YP_003253303.1	KEGG: gka:GK1417 hypothetical protein
YP_003253304.1	PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: gka:GK1419 hypothetical protein
YP_003253305.1	PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: gka:GK1420 beta-alanine synthase
YP_003253306.1	function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain
YP_003253307.1	catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines
YP_003253308.1	catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position
YP_003253309.1	KEGG: gka:GK1424 hypothetical protein
YP_003253310.1	PFAM: purine catabolism PurC domain protein; KEGG: gka:GK1425 hypothetical protein
YP_003253311.1	TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: gka:GK1426 aldehyde dehydrogenase
YP_003253312.1	PFAM: aminotransferase class-III; KEGG: gka:GK1427 aminotransferase
YP_003253313.1	TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: gka:GK1429 hypothetical protein
YP_003253314.1	KEGG: gwc:GWCH70_1342 dihydroxyacetone kinase, DhaK subunit; TIGRFAM: dihydroxyacetone kinase, DhaK subunit; PFAM: Dak kinase
YP_003253315.1	TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; KEGG: gwc:GWCH70_1343 dihydroxyacetone kinase, L subunit
YP_003253316.1	TIGRFAM: dihydroxyacetone kinase, phosphotransfer subunit; PFAM: PTS system fructose subfamily IIA component; KEGG: gwc:GWCH70_1344 dihydroxyacetone kinase, phosphotransfer subunit
YP_003253317.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: gka:GK1430 LysR family transcriptional regulator
YP_003253318.1	PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase subunit alpha domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: gka:GK1431 glutamate synthaselarge subunit
YP_003253319.1	glutamate synthase is composed of subunits alpha and beta; subunit beta is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the subunit alpha, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate
YP_003253320.1	PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: gka:GK1433 hypothetical protein
YP_003253321.1	PFAM: M penetrans paralogue 2 domain protein; KEGG: gka:GK1434 hypothetical protein
YP_003253322.1	PFAM: protein of unknown function DUF2157, membrane; KEGG: gka:GK1435 hypothetical protein
YP_003253323.1	PFAM: fructosamine/ketosamine-3-kinase; aminoglycoside phosphotransferase; KEGG: gka:GK1436 hypothetical protein
YP_003253324.1	Modulates the activities of several enzymes which are inactive in their acetylated form
YP_003253325.1	TIGRFAM: intracellular protease PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: gka:GK1438 intracellular proteinase
YP_003253326.1	PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: gka:GK1440 malic enzyme
YP_003253327.1	KEGG: gka:GK1441 hypothetical protein
YP_003253328.1	PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: cdf:CD3087 phosphosugar-binding transcriptional regulator
YP_003253329.1	involved in the phosphorylation and transport of sugars across the cell membrane; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake
YP_003253330.1	PFAM: glycoside hydrolase family 38; glycosyl hydrolase 38 domain protein; KEGG: cdf:CD3085 alpha-mannosidase
YP_003253331.1	PFAM: SCP-like extracellular; KEGG: gka:GK1442 hypothetical protein
YP_003253332.1	PFAM: major facilitator superfamily MFS_1; KEGG: gka:GK1443 multidrug resistance protein
YP_003253333.1	KEGG: gka:GK1444 hypothetical protein
YP_003253334.1	PFAM: protein of unknown function DUF541; KEGG: gka:GK1445 hypothetical protein
YP_003253335.1	KEGG: gwc:GWCH70_1995 hypothetical protein
YP_003253336.1	PFAM: 5-bromo-4-chloroindolyl phosphate hydrolysis protein; KEGG: gka:GK1446 hypothetical protein
YP_003253337.1	PFAM: toxic anion resistance family protein; KEGG: gka:GK1447 toxic ion resistance protein
YP_003253338.1	PFAM: protein of unknown function DUF2512; KEGG: gka:GK1448 hypothetical protein
YP_003253339.1	KEGG: gwc:GWCH70_1991 hypothetical protein
YP_003253340.1	KEGG: gka:GK1450 hypothetical protein
YP_003253341.1	KEGG: gka:GK1451 hypothetical protein
YP_003253342.1	TIGRFAM: ammonium transporter; PFAM: ammonium transporter; KEGG: gka:GK1452 ammonium transporter
YP_003253343.1	PFAM: protein of unknown function DUF294 nucleotidyltransferase ; Domain of unknown function DUF294,  nucleotidyltransferase substrate-binding; KEGG: gka:GK1453 hypothetical protein
YP_003253344.1	PFAM: exonuclease RNase T and DNA polymerase III; SMART: exonuclease; KEGG: gka:GK1454 hypothetical protein
YP_003253345.1	KEGG: gtn:GTNG_1316 hypothetical protein
YP_003253346.1	PFAM: major facilitator superfamily MFS_1; KEGG: oih:OB1197 antibiotic resistance protein
YP_003253347.1	PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: aau:AAur_0334  aromatic-ring hydroxylase (monooxygenase)
YP_003253348.1	PFAM: cupin; KEGG: bcu:BCAH820_3034 gentisate 1,2-dioxygenase
YP_003253349.1	PFAM: fumarylacetoacetate hydrolase; KEGG: bcu:BCAH820_3036 fumarylacetoacetate hydrolase domain-containing protein 2
YP_003253350.1	PFAM: YCII-related; KEGG: nfa:nfa36300 hypothetical protein
YP_003253351.1	PFAM: regulatory protein IclR; transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: dar:Daro_0804 regulatory proteins, IclR
YP_003253352.1	KEGG: chy:CHY_0293 PilT domain-containing protein
YP_003253353.1	PFAM: periplasmic binding protein; KEGG: gka:GK1457 iron(III) dicitrate ABC transporter (lipoprotein)
YP_003253354.1	PFAM: transporter permease; KEGG: gka:GK1459 iron(III) dicitrate ABC transporter (permease)
YP_003253355.1	PFAM: transporter permease; KEGG: gka:GK1460 iron(III) dicitrate ABC transporter (permease)
YP_003253356.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK1461 iron(III) dicitrate ABC transporter ATP-binding protein
YP_003253357.1	KEGG: gka:GK1462 hypothetical protein
YP_003253358.1	KEGG: gka:GK1463 hypothetical protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein
YP_003253359.1	KEGG: gka:GK1464 hypothetical protein
YP_003253360.1	PFAM: GCN5-related N-acetyltransferase; KEGG: gka:GK1465 hypothetical protein
YP_003253361.1	PFAM: phosphoglycerate mutase; KEGG: gka:GK1466 phosphoglycerate mutase
YP_003253362.1	PFAM: Ferrous iron transport B domain protein; nucleoside recognition domain protein; Ferrous iron transporter B domain protein; KEGG: gka:GK1482 hypothetical protein
YP_003253363.1	TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KEGG: gka:GK1483 hypothetical protein
YP_003253364.1	PFAM: FeoA family protein; KEGG: gka:GK1484 ferrous iron uptake system protein A
YP_003253365.1	AcsA; in Sinorhizobium meliloti this enzyme is required for acetoacetate activation; similar to acetyl-CoA synthase
YP_003253366.1	PFAM: GAF domain protein; SMART: GAF domain protein; KEGG: bha:BH1994 hypothetical protein
YP_003253367.1	PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: bcu:BCAH820_3043 3-hydroxybutyryl-CoA dehydrogenase
YP_003253368.1	PFAM: enoyl-CoA hydratase/isomerase; KEGG: bcu:BCAH820_3042 3-hydroxybutyryl-CoA dehydratase
YP_003253369.1	PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: bcu:BCAH820_3052 benzoate MFS transporter
YP_003253370.1	KEGG: bpt:Bpet4333 hypothetical protein
YP_003253371.1	PFAM: AMP-dependent synthetase and ligase; KEGG: bha:BH2006 long-chain acyl-CoA synthetase (ligase)
YP_003253372.1	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis
YP_003253373.1	PFAM: regulatory protein IclR; transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: chy:CHY_1273 IclR family transcriptional regulator
YP_003253374.1	PFAM: cupin; KEGG: bha:BH2004 gentisate 1,2-dioxygenase
YP_003253375.1	PFAM: AMP-dependent synthetase and ligase; KEGG: pla:Plav_1766 cyclohexanecarboxylate-CoA ligase
YP_003253376.1	PFAM: fumarylacetoacetate hydrolase; KEGG: bha:BH2005 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
YP_003253377.1	PFAM: major facilitator superfamily MFS_1; KEGG: rxy:Rxyl_1541 major facilitator transporter
YP_003253378.1	PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; HI0933 family protein; KEGG: bha:BH1998 hypothetical protein
YP_003253379.1	KEGG: bha:BH2003 hypothetical protein
YP_003253380.1	PFAM: amidohydrolase 2; KEGG: bld:BLi03996 hypothetical protein
YP_003253381.1	PFAM: transcriptional regulator IclR ; regulatory protein IclR; regulatory protein ArsR; SMART: regulatory protein IclR; KEGG: bld:BLi03995 hypothetical protein
YP_003253382.1	KEGG: bld:BLi03994 hypothetical protein; TIGRFAM: 2-hydroxymuconic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase
YP_003253383.1	PFAM: fumarylacetoacetate hydrolase; KEGG: gtn:GTNG_3153 2-hydroxypenta-2,4-dienoate hydratase
YP_003253384.1	catalyzes the formation of acetyl-CoA from acetalaldehyde
YP_003253385.1	catalyzes the formation of pyruvate and acetaldehyde from 4-hydroxy-2-ketovaleric acid; involved in the degradation of phenylpropionate
YP_003253386.1	PFAM: fumarylacetoacetate hydrolase; KEGG: bld:BLi03993 hypothetical protein
YP_003253387.1	4-OT; member of subfamily 5; forms a dimer; the function in the Escherichia coli cell is unknown
YP_003253388.1	PFAM: extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: bld:BLi03991 hypothetical protein
YP_003253389.1	PFAM: extracellular ligand-binding receptor; KEGG: rxy:Rxyl_0193 extracellular ligand-binding receptor
YP_003253390.1	PFAM: inner-membrane translocator; KEGG: rxy:Rxyl_0194 inner-membrane translocator
YP_003253391.1	PFAM: inner-membrane translocator; KEGG: rxy:Rxyl_0195 inner-membrane translocator
YP_003253392.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: rxy:Rxyl_0196 ABC transporter
YP_003253393.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: rxy:Rxyl_0197 ABC transporter
YP_003253394.1	PFAM: aldehyde dehydrogenase; KEGG: bsu:BSU38830 aldehyde dehydrogenase
YP_003253395.1	PFAM: transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: aac:Aaci_1624  IclR family transcriptional regulator
YP_003253396.1	PFAM: transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: aac:Aaci_1624  IclR family transcriptional regulator
YP_003253397.1	KEGG: rba:RB10398 coenzyme F390 synthetase (FtsA-2)
YP_003253398.1	PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; HI0933 family protein; KEGG: bha:BH1998 hypothetical protein
YP_003253399.1	PFAM: thioesterase superfamily protein; KEGG: bcu:BCAH820_3039 4-hydroxybenzoyl-CoA thioesterase
YP_003253400.1	PFAM: fumarylacetoacetate hydrolase; KEGG: bha:BH2000 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
YP_003253401.1	KEGG: bha:BH2001 hypothetical protein
YP_003253402.1	PFAM: cupin; KEGG: bha:BH2002 gentisate 1,2-dioxygenase
YP_003253403.1	PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: eba:ebA5311 benzoate MFS transporter
YP_003253404.1	KEGG: bha:BH2003 hypothetical protein
YP_003253405.1	KEGG: gka:GK1486 hypothetical protein
YP_003253406.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK1487 hypothetical protein
YP_003253407.1	PFAM: protein of unknown function DUF990; ABC-2 type transporter; KEGG: gka:GK1488 hypothetical protein
YP_003253408.1	PFAM: protein of unknown function DUF990; KEGG: gka:GK1489 hypothetical protein
YP_003253409.1	PFAM: transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR; KEGG: gka:GK1490 transcriptional regulator (mercuric resistance operon regulatory protein)
YP_003253410.1	PFAM: AMP-dependent synthetase and ligase; KEGG: gka:GK1491 long-chain fatty-acid-CoA ligase
YP_003253411.1	PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: gka:GK1492 hypothetical protein
YP_003253412.1	KEGG: gka:GK1493 hypothetical protein
YP_003253413.1	KEGG: afl:Aflv_1926 signal transduction diguanylate cyclase (HPT-REC-GGDEF-REC domains); TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; SMART: GGDEF domain containing protein; response regulator receiver
YP_003253414.1	SMART: response regulator receiver; KEGG: afl:Aflv_1922 CheY-like receiver domain protein
YP_003253415.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: afl:Aflv_1921 hybrid signal transduction histidine kinase
YP_003253416.1	PFAM: protein of unknown function DUF159; KEGG: gka:GK1494 hypothetical protein
YP_003253417.1	PFAM:  thiol-disulphide oxidoreductase DCC; KEGG: gka:GK1495 hypothetical protein
YP_003253418.1	KEGG: gka:GK1496 hypothetical protein
YP_003253419.1	TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: YjeF-family domain protein; protein of unknown function UPF0031; KEGG: gka:GK1497 hypothetical protein
YP_003253420.1	PFAM: GCN5-related N-acetyltransferase; KEGG: gka:GK1498 hypothetical protein
YP_003253421.1	PFAM: transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: gka:GK1499 IclR family transcriptional regulator
YP_003253422.1	PFAM: allophanate hydrolase subunit 1; SMART: allophanate hydrolase subunit 1; KEGG: gka:GK1500 hypothetical protein
YP_003253423.1	KEGG: gka:GK1501 hypothetical protein; TIGRFAM: urea amidolyase; PFAM: allophanate hydrolase subunit 2; SMART: allophanate hydrolase subunit 2
YP_003253424.1	PFAM: LamB/YcsF family protein; KEGG: gka:GK1502 LamB/YcsF family protein
YP_003253425.1	KEGG: bay:RBAM_010650 YhjA
YP_003253426.1	PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: gtn:GTNG_1355 hypothetical protein
YP_003253427.1	activates fatty acids by binding to coenzyme A
YP_003253428.1	PFAM: aryldialkylphosphatase; KEGG: gka:GK1506 phosphotriesterase
YP_003253429.1	KEGG: gka:GK1507 hypothetical protein
YP_003253430.1	PFAM: glycosyl transferase family 2; KEGG: gka:GK1508 hypothetical protein
YP_003253431.1	catalyzes the formation of 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP
YP_003253432.1	catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine
YP_003253433.1	Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate
YP_003253434.1	PFAM: acyltransferase 3; KEGG: gka:GK1512 hypothetical protein
YP_003253435.1	PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: gwc:GWCH70_2089 transposase IS116/IS110/IS902 family protein
YP_003253436.1	KEGG: gka:GK1513 hypothetical protein
YP_003253437.1	TIGRFAM: small acid-soluble spore protein, H-type; PFAM: small acid-soluble spore H family protein; KEGG: gka:GK1514 hypothetical protein
YP_003253438.1	TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes
YP_003253439.1	PFAM: protein of unknown function DUF161; KEGG: gka:GK1516 hypothetical protein
YP_003253440.1	PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: gka:GK1517 subtilisin-type proteinase
YP_003253441.1	PFAM: Coat F domain protein; KEGG: gka:GK1518 spore coat protein
YP_003253442.1	KEGG: gka:GK1519 spore coat protein
YP_003253443.1	KEGG: gka:GK1520 hypothetical protein
YP_003253444.1	KEGG: bha:BH1830 hypothetical protein
YP_003253445.1	KEGG: gka:GK1522 hypothetical protein
YP_003253446.1	PFAM: histidine kinase-like; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gka:GK1523 histidine protein kinase
YP_003253447.1	TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta; KEGG: gka:GK1525 cysteine synthase
YP_003253448.1	KEGG: bcy:Bcer98_1894 GCN5-related N-acetyltransferase
YP_003253449.1	TIGRFAM: membrane protein AbrB duplication; PFAM:  ammonia monooxygenase; KEGG: gka:GK1526 hypothetical protein
YP_003253450.1	PFAM: protein of unknown function UPF0005; KEGG: gka:GK1527 hypothetical protein
YP_003253451.1	KEGG: gka:GK1528 hydroxypyruvate isomerase; TIGRFAM: hydroxypyruvate isomerase; PFAM: xylose isomerase
YP_003253452.1	PFAM: 6-phosphogluconate dehydrogenase NAD-binding; NADP oxidoreductase coenzyme F420-dependent; KEGG: gka:GK1529 hypothetical protein
YP_003253453.1	PFAM: FAD linked oxidase; KEGG: gka:GK1530 glycolate oxidase subunit
YP_003253454.1	PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: gtn:GTNG_1382 glycolate oxidase iron-sulfur subunit
YP_003253455.1	PFAM: FAD linked oxidase; KEGG: gka:GK1532 glycolate oxidase subunit
YP_003253456.1	catalyzes the formation of malate from glyoxylate and acetyl-CoA
YP_003253457.1	PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: gka:GK1534 malate dehydrogenase (malic enzyme)
YP_003253458.1	PFAM: transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: gka:GK1536 IclR family transcriptional regulator
YP_003253459.1	TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; KEGG: gka:GK1646 transposase
YP_003253460.1	PFAM: DEAD/DEAH box helicase; protein of unknown function DUF1998; helicase; SMART: DEAD-like helicase ; helicase; KEGG: gka:GK1537 ATP-dependent RNA helicase
YP_003253461.1	KEGG: gka:GK1538 hypothetical protein
YP_003253462.1	PFAM: transposase IS4 family protein; KEGG: gka:GK2942 hypothetical protein
YP_003253463.1	KEGG: gwc:GWCH70_1908 hypothetical protein
YP_003253464.1	GpsB; guiding PBP1 shuttling; similar to DivIVA
YP_003253465.1	KEGG: gka:GK1542 hypothetical protein
YP_003253466.1	PFAM:  RNA methylase; KEGG: gka:GK1543 hypothetical protein
YP_003253467.1	SMART: helicase c2; KEGG: gka:GK1544 ATP-dependent helicase
YP_003253468.1	PFAM: peptidase M32 carboxypeptidase Taq metallopeptidase; KEGG: gka:GK1545 thermostable carboxypeptidase
YP_003253469.1	PFAM: cytochrome C oxidase subunit I; KEGG: gka:GK1546 cytochrome C oxidase (b(o/a)3-type) chain I
YP_003253470.1	PFAM: cytochrome C oxidase subunit II; KEGG: gka:GK1547 cytochrome C oxidase (b(o/a)3-type) chain II
YP_003253471.1	KEGG: gka:GK1548 hypothetical protein
YP_003253472.1	TIGRFAM: xanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: gtn:GTNG_1397 xanthine phosphoribosyltransferase
YP_003253473.1	TIGRFAM: xanthine permease; uracil-xanthine permease; PFAM: xanthine/uracil/vitamin C permease; KEGG: gtn:GTNG_1398 xanthine permease
YP_003253474.1	KEGG: gka:GK1550 hypothetical protein
YP_003253475.1	PFAM: chalcone and stilbene synthase domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: gka:GK1551 naringenin-chalcone synthase
YP_003253476.1	PFAM: isoprenylcysteine carboxyl methyltransferase; KEGG: gka:GK1552 hypothetical protein
YP_003253477.1	PFAM: dynamin; GTP-binding protein HSR1-related; KEGG: gka:GK1553 hypothetical protein
YP_003253478.1	KEGG: gka:GK1554 hypothetical protein
YP_003253479.1	PFAM: protein of unknown function DUF2533; KEGG: gka:GK1555 hypothetical protein
YP_003253480.1	PFAM: rhodanese; SMART: Rhodanese domain protein; KEGG: gka:GK1556 thiosulfate sulfurtransferase
YP_003253481.1	KEGG: gka:GK1557 hypothetical protein
YP_003253482.1	PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; redoxin; KEGG: gka:GK1558 hypothetical protein
YP_003253483.1	KEGG: gka:GK1559 hypothetical protein
YP_003253484.1	SASP N; found in forespore compartment
YP_003253485.1	TIGRFAM: small, acid-soluble spore protein tlp; KEGG: gka:GK1561 small acid-soluble spore protein Tlp
YP_003253486.1	PFAM: thioesterase superfamily protein; KEGG: gka:GK1562 hypothetical protein
YP_003253487.1	KEGG: gka:GK1563 hypothetical protein
YP_003253488.1	PFAM: thioesterase superfamily protein; KEGG: gka:GK1564 hypothetical protein
YP_003253489.1	PFAM: HesB/YadR/YfhF-family protein; KEGG: gka:GK1565 hypothetical protein
YP_003253490.1	KEGG: gka:GK1566 hypothetical protein
YP_003253491.1	PFAM: Mg2 transporter protein CorA family protein; KEGG: gka:GK1567 transporter
YP_003253492.1	PFAM: protein of unknown function DUF502; KEGG: gka:GK1568 hypothetical protein
YP_003253493.1	PFAM: FAD dependent oxidoreductase; KEGG: gka:GK1569 hypothetical protein
YP_003253494.1	catalyzes the formation of biotin from dethiobiotin and sulfur 2 S-adenosyl-L-methionine
YP_003253495.1	PFAM: protein of unknown function DUF1250; KEGG: gka:GK1571 hypothetical protein
YP_003253496.1	KEGG: gka:GK1572 hypothetical protein
YP_003253497.1	KEGG: gwc:GWCH70_1872 hypothetical protein
YP_003253498.1	KEGG: gka:GK1573 hypothetical protein
YP_003253499.1	PFAM: protein of unknown function DUF2515; KEGG: gka:GK1574 hypothetical protein
YP_003253500.1	KEGG: gka:GK1575 hypothetical protein
YP_003253501.1	KEGG: gka:GK1576 hypothetical protein
YP_003253502.1	KEGG: gtn:GTNG_1425 hypothetical protein
YP_003253503.1	KEGG: gka:GK1578 hypothetical protein
YP_003253504.1	KEGG: gwc:GWCH70_1865 hypothetical protein
YP_003253505.1	catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate
YP_003253506.1	PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: gka:GK1581 D-alanyl-D-alanine carboxypeptidase
YP_003253507.1	PFAM: methyltransferase type 11; UbiE/COQ5 methyltransferase; methyltransferase type 12; KEGG: gka:GK1582 hypothetical protein
YP_003253508.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: gka:GK1583 hypothetical protein
YP_003253509.1	PFAM: Mg2 transporter protein CorA family protein; KEGG: gka:GK1584 hypothetical protein
YP_003253510.1	TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: gka:GK1585 hypothetical protein
YP_003253511.1	PFAM: conserved hypothetical protein; KEGG: gka:GK1586 hypothetical protein
YP_003253512.1	PFAM: conserved hypothetical protein; KEGG: gka:GK1587 hypothetical protein
YP_003253513.1	PFAM: protein of unknown function DUF1028; peptidoglycan binding; KEGG: gka:GK1588 hypothetical protein
YP_003253514.1	NorM; MdtK; functions as a Na(+)/drug antiporter; inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones
YP_003253515.1	KEGG: gka:GK1590 hypothetical protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein
YP_003253516.1	PFAM: threonyl/alanyl tRNA synthetase SAD; KEGG: rci:RRC497 alanyl-tRNA synthetase-related protein
YP_003253517.1	catalyzes the formation of 2-oxobutanoate from L-threonine
YP_003253519.1	KEGG: gtn:GTNG_1441 hypothetical protein
YP_003253520.1	PFAM: GCN5-related N-acetyltransferase; KEGG: gka:GK1594 hypothetical protein
YP_003253521.1	KEGG: gwc:GWCH70_1847 hypothetical protein
YP_003253522.1	KEGG: gtn:GTNG_1443 hypothetical protein
YP_003253523.1	PFAM: regulatory protein TetR; KEGG: gka:GK1596 TetR/AcrR family transcriptional regulator
YP_003253524.1	PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: gka:GK1597 CoA dehydrogenase
YP_003253525.1	PFAM: AMP-dependent synthetase and ligase; KEGG: gka:GK1598 AMP-binding domain protein
YP_003253526.1	an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism
YP_003253527.1	composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism
YP_003253528.1	catalyzes the formation of acetoacetate and acetyl-CoA from 3-hydroxy-3-methylglutaryl-CoA
YP_003253529.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
YP_003253530.1	PFAM: carboxyl transferase; KEGG: gka:GK1603 propionyl-CoA carboxylase
YP_003253531.1	PFAM: regulatory protein MarR; iron dependent repressor; SMART: regulatory protein MarR; KEGG: gka:GK1605 MarR family transcriptional regulator
YP_003253532.1	KEGG: gka:GK1606 hypothetical protein
YP_003253533.1	TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: gka:GK1607 multidrug resistance protein
YP_003253534.1	KEGG: gka:GK1609 hypothetical protein
YP_003253535.1	KEGG: gka:GK1610 hypothetical protein
YP_003253536.1	KEGG: gka:GK1611 hypothetical protein
YP_003253537.1	KEGG: gka:GK1613 hypothetical protein
YP_003253538.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gka:GK1614 two-component sensor histidine kinase
YP_003253539.1	TIGRFAM: germination protein, Ger(x)C family; KEGG: gtn:GTNG_1464 spore germination protein XC (pXO1-112)
YP_003253540.1	PFAM: GerA spore germination protein; KEGG: gtn:GTNG_1465 spore germination protein XA
YP_003253541.1	TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: gtn:GTNG_1466 spore germination protein XB
YP_003253542.1	PFAM: protein of unknown function DUF421; KEGG: gwc:GWCH70_1825 protein of unknown function DUF421
YP_003253543.1	PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: gka:GK1620 GntR family transcriptional regulator
YP_003253544.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK1621 ABC transporter ATP-binding protein
YP_003253545.1	KEGG: gka:GK1622 hypothetical protein
YP_003253546.1	PFAM: GerA spore germination protein; KEGG: gka:GK1624 spore germination protein
YP_003253547.1	TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: gka:GK1625 spore germination protein
YP_003253548.1	TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: gka:GK1626 spore germination protein
YP_003253549.1	KEGG: gka:GK1627 hypothetical protein; TIGRFAM: PAS sensor protein; PFAM: stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; PAS domain containing protein
YP_003253550.1	KEGG: gka:GK1628 hypothetical protein
YP_003253551.1	PFAM: sulfate transporter/antisigma-factor antagonist STAS; KEGG: gka:GK1629 stage II sporulation protein AA
YP_003253552.1	PFAM: ABC transporter; ABC transporter transmembrane region; SMART: ATPase AAA; KEGG: gka:GK1630 ABC transporter ATP-binding protein
YP_003253553.1	PFAM: ABC transporter; ABC transporter transmembrane region; SMART: ATPase AAA; KEGG: gka:GK1631 ABC transporter ATP-binding protein
YP_003253554.1	KEGG: gwc:GWCH70_0956 hypothetical protein
YP_003253555.1	PFAM: MOSC domain containing protein; 3-alpha domain protein; KEGG: gka:GK1632 hypothetical protein
YP_003253556.1	TIGRFAM: luciferase family oxidoreductase, group 1; PFAM: Luciferase-like, subgroup; KEGG: gka:GK1633 hypothetical protein
YP_003253557.1	KEGG: gka:GK1634 hypothetical protein
YP_003253558.1	PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; redoxin; KEGG: gka:GK1635 hypothetical protein
YP_003253559.1	PFAM: AIG2 family protein; KEGG: gka:GK1636 hypothetical protein
YP_003253560.1	KEGG: gka:GK1637 glutamate-ammonia ligase; TIGRFAM: glutamine synthetase; PFAM: glutamine synthetase; glutamine synthetase beta-Grasp
YP_003253561.1	PFAM: protein of unknown function DUF81; KEGG: gka:GK1638 hypothetical protein
YP_003253562.1	PFAM: beta-lactamase; KEGG: gka:GK1640 hypothetical protein
YP_003253563.1	KEGG: gka:GK1641 hypothetical protein
YP_003253564.1	PFAM: lipolytic protein G-D-S-L family; KEGG: gka:GK1642 hypothetical protein
YP_003253565.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK1643 ABC transporter ATP-binding protein
YP_003253566.1	KEGG: gka:GK1644 hypothetical protein
YP_003253567.1	PFAM: SpoVT/AbrB domain protein; KEGG: gka:GK1647 suppressor of ppGpp-regulated growth inhibitor (ChpA/MazF)
YP_003253568.1	PFAM: PemK family protein; KEGG: gka:GK1648 ppGpp-regulated growth inhibitor (ChpA/MazF)
YP_003253569.1	PFAM: pirin; KEGG: gka:GK1651 pirin-like protein
YP_003253570.1	PFAM: nitroreductase; KEGG: gka:GK1652 nitro/flavin reductase
YP_003253571.1	Modulates the activities of several enzymes which are inactive in their acetylated form
YP_003253572.1	PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: gka:GK1654 acyl-CoA dehydrogenase
YP_003253573.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gka:GK1655 short chain oxidoreductase
YP_003253574.1	KEGG: gka:GK1656 hypothetical protein
YP_003253575.1	PFAM: MaoC domain protein dehydratase; KEGG: gka:GK1657 hypothetical protein
YP_003253576.1	KEGG: gka:GK1658 acetyl-CoA C-acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: thiolase
YP_003253577.1	PFAM: regulatory protein TetR; KEGG: gka:GK1659 TetR/AcrR family transcriptional regulator
YP_003253578.1	PFAM: inner-membrane translocator; KEGG: gka:GK1660 branched-chain amino acid ABC transporter (permease)
YP_003253579.1	PFAM: inner-membrane translocator; KEGG: gka:GK1661 branched-chain amino acid ABC transporter (permease)
YP_003253580.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK1662 branched-chain amino acid ABC transporter ATP-binding protein
YP_003253581.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK1663 branched-chain amino acid ABC transporter ATP-binding protein
YP_003253582.1	PFAM: extracellular ligand-binding receptor; KEGG: gka:GK1664 branched-chain amino acid ABC transporter (substrate-binding protein)
YP_003253583.1	PFAM: OsmC family protein; KEGG: gka:GK1665 hypothetical protein
YP_003253584.1	PFAM: protein of unknown function DUF988; KEGG: gka:GK1667 citrulline related protein
YP_003253585.1	PFAM: Chromate transporter; KEGG: gka:GK1668 chromate transporter
YP_003253586.1	PFAM: protein of unknown function DUF606; KEGG: gka:GK1674 hypothetical protein
YP_003253587.1	TIGRFAM: YhgE/Pip N-terminal domain protein; YhgE/Pip C-terminal domain protein; PFAM: ABC transporter; KEGG: gka:GK1675 phage infection protein
YP_003253588.1	PFAM: nitric oxide synthase NOS; KEGG: gka:GK1676 nitric oxide synthase
YP_003253589.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK1677 ABC transporter ATP-binding protein
YP_003253590.1	TIGRFAM: germination protein, Ger(x)C family; KEGG: gka:GK1616 spore germination protein
YP_003253591.1	KEGG: gka:GK1680 hypothetical protein
YP_003253592.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gka:GK1683 short chain dehydrogenase
YP_003253593.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gka:GK1684 3-oxoacyl-[acyl-carrier protein] reductase (3-ketoacyl-[acyl carrier protein] reductase)
YP_003253594.1	PFAM: enoyl-CoA hydratase/isomerase; KEGG: gka:GK1685 enoyl-CoA hydratase
YP_003253595.1	PFAM: tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: gka:GK1686 serine/threonine protein kinase
YP_003253596.1	KEGG: gka:GK1687 hypothetical protein
YP_003253597.1	KEGG: gka:GK1688 DNA topoisomerase III; TIGRFAM: DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; DNA topoisomerase type IA zn finger domain protein; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein
YP_003253598.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: gka:GK1689 two-component sensor histidine kinase
YP_003253599.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: gka:GK1690 two-component response regulator
YP_003253600.1	PFAM: SNARE associated Golgi protein; KEGG: gka:GK1691 hypothetical protein
YP_003253601.1	PFAM: protein of unknown function DUF1541; KEGG: gka:GK1692 hypothetical protein
YP_003253602.1	PFAM: membrane-flanked domain; KEGG: gka:GK1696 hypothetical protein
YP_003253603.1	PFAM: membrane-flanked domain; KEGG: gka:GK1697 hypothetical protein
YP_003253604.1	KEGG: gtn:GTNG_1542 amino acid transporter LysE
YP_003253605.1	involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function
YP_003253606.1	KEGG: gka:GK1698 hypothetical protein
YP_003253607.1	KEGG: gka:GK1699 hypothetical protein
YP_003253608.1	KEGG: gka:GK1700 hypothetical protein
YP_003253609.1	KEGG: gka:GK1701 hypothetical protein
YP_003253610.1	PFAM: major facilitator superfamily MFS_1; KEGG: bcy:Bcer98_1884 major facilitator transporter
YP_003253611.1	TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; KEGG: gka:GK1710 catalase
YP_003253612.1	KEGG: bcu:BCAH820_0839 hypothetical protein
YP_003253613.1	KEGG: gka:GK1731 hypothetical protein
YP_003253614.1	KEGG: gka:GK1732 hypothetical protein
YP_003253615.1	SMART: von Willebrand factor A; KEGG: gka:GK1733 hypothetical protein
YP_003253616.1	PFAM: ATPase associated with various cellular activities AAA_5; ATPase AAA; SMART: AAA ATPase; KEGG: gka:GK1734 denitrification regulatory protein
YP_003253617.1	PFAM: replication terminator protein; KEGG: gka:GK1735 replication terminator protein
YP_003253618.1	produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine
YP_003253619.1	flavohemoprotein; catalyzes the formation of nitrate from nitric oxide; can also catalyze the reduction of dihydropteridine
YP_003253620.1	TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: gka:GK1738 hypothetical protein
YP_003253621.1	TIGRFAM: spermidine synthase; PFAM: Spermine synthase; KEGG: gka:GK1740 spermidine synthase(putrescine aminopropyltransferase)
YP_003253622.1	PFAM: acyl-CoA dehydrogenase type 2 domain; acyl-CoA dehydrogenase domain protein; KEGG: gka:GK1741 short chain-specific acyl-CoA dehydrogenase
YP_003253623.1	PFAM: aminotransferase class V; KEGG: gka:GK1742 aminotransferase
YP_003253624.1	TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; KEGG: gka:GK1987 transposase
YP_003253625.1	PFAM: thioesterase superfamily protein; KEGG: gka:GK1743 hypothetical protein
YP_003253626.1	PFAM: Na+/H+ antiporter NhaC-like; KEGG: gka:GK1744 hypothetical protein
YP_003253627.1	KEGG: gka:GK1745 trehalose operon transcriptional repressor; TIGRFAM: trehalose operon repressor; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH
YP_003253628.1	KEGG: gka:GK1746 alpha,alpha-phosphotrehalase; TIGRFAM: alpha,alpha-phosphotrehalase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain
YP_003253629.1	TIGRFAM: PTS system, trehalose-specific IIBC subunit; PTS system, maltose and glucose-specific subfamily, IIC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system EIIB/cysteine, phosphorylation site; KEGG: gka:GK1747 PTS system, trehalose-specific enzyme II, BC component
YP_003253630.1	KEGG: gka:GK1748 hypothetical protein
YP_003253631.1	PFAM: type IV pilus assembly PilZ; KEGG: gka:GK1749 hypothetical protein
YP_003253632.1	decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling
YP_003253633.1	decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling
YP_003253634.1	PFAM: CoA-binding protein; KEGG: gka:GK1752 hypothetical protein
YP_003253635.1	KEGG: gka:GK1753 hypothetical protein
YP_003253636.1	PFAM: ABC transporter; KEGG: gka:GK1754 ABC transporter
YP_003253637.1	KEGG: gka:GK1755 hypothetical protein
YP_003253638.1	PFAM: beta-lactamase; KEGG: gka:GK1756 hypothetical protein
YP_003253639.1	KEGG: msi:Msm_0961 heavy-metal cation transporting ATPase
YP_003253640.1	PFAM: conserved hypothetical protein; KEGG: gka:GK1757 hypothetical protein
YP_003253641.1	KEGG: gka:GK1758 hypothetical protein
YP_003253642.1	catalyzes the removal of 5-oxoproline from various penultimate amino acid residues except L-proline
YP_003253643.1	PFAM: protein of unknown function DUF979; KEGG: aac:Aaci_2880 protein of unknown function DUF979
YP_003253644.1	PFAM: protein of unknown function DUF969; KEGG: aac:Aaci_2881 protein of unknown function DUF969
YP_003253645.1	PFAM: oxidoreductase molybdopterin binding; KEGG: gka:GK1759 hypothetical protein
YP_003253646.1	KEGG: gka:GK1760 hypothetical protein
YP_003253647.1	catalyzes the formation of L-threonine from O-phospho-L-homoserine
YP_003253648.1	catalyzes the release of the N-terminal amino acid from a tripeptide
YP_003253649.1	TIGRFAM: ammonium transporter; PFAM: ammonium transporter; KEGG: aac:Aaci_2892 ammonium transporter
YP_003253650.1	PFAM: nitrogen regulatory protein P-II; KEGG: aac:Aaci_2893 nitrogen regulatory protein P-II
YP_003253651.1	PFAM: OsmC family protein; KEGG: gka:GK1765 hypothetical protein
YP_003253652.1	involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX
YP_003253653.1	TIGRFAM: RNA methylase, NOL1/NOP2/sun family; PFAM: Fmu (Sun) domain protein; KEGG: gka:GK1767 hypothetical protein
YP_003253654.1	PFAM: protein of unknown function DUF2140; KEGG: gka:GK1768 hypothetical protein
YP_003253655.1	PFAM: lipolytic protein G-D-S-L family; KEGG: gka:GK1769 hypothetical protein
YP_003253656.1	PFAM: electron transporter SCO1/SenC; KEGG: gka:GK1770 hypothetical protein
YP_003253657.1	KEGG: gka:GK1771 hypothetical protein
YP_003253658.1	PFAM: protein of unknown function DUF2535; KEGG: gka:GK1772 hypothetical protein
YP_003253659.1	catalyzes the formation of 2-oxobutanoate from L-threonine; biosynthetic
YP_003253660.1	PFAM: protein of unknown function DUF2512; KEGG: gka:GK1774 hypothetical protein
YP_003253661.1	PFAM: dihydrofolate reductase region; KEGG: gka:GK1775 dihydrofolate reductase
YP_003253662.1	ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived
YP_003253663.1	KEGG: gka:GK1777 hypothetical protein
YP_003253664.1	KEGG: gka:GK1778 hypothetical protein
YP_003253665.1	catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate
YP_003253666.1	KEGG: gka:GK1780 hypothetical protein
YP_003253667.1	PFAM: protein of unknown function DUF1094; KEGG: gka:GK1781 hypothetical protein
YP_003253668.1	PFAM: NUDIX hydrolase; KEGG: gka:GK1782 hypothetical protein
YP_003253669.1	PFAM: Scaffold protein Nfu/NifU ; PBS lyase HEAT domain protein repeat-containing protein; SMART: PBS lyase HEAT domain protein repeat-containing protein; KEGG: gtn:GTNG_1677 heat repeat-containing PBS lyase
YP_003253670.1	PFAM: glutathione peroxidase; KEGG: gka:GK1785 glutathione peroxidase
YP_003253671.1	KEGG: gtn:GTNG_1679 hypothetical protein
YP_003253672.1	catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis
YP_003253673.1	PFAM: conserved hypothetical protein; KEGG: gka:GK1788 hypothetical protein
YP_003253674.1	KEGG: gka:GK1790 hypothetical protein
YP_003253675.1	KEGG: gka:GK1791 cobalamin adenosyltransferase; TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
YP_003253676.1	TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: gtn:GTNG_1682 uroporphyrin-III C-methyltransferase-like protein
YP_003253677.1	KEGG: gka:GK1793 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase
YP_003253678.1	catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation
YP_003253679.1	responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid
YP_003253680.1	PFAM: cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: gka:GK1797 cobalamin biosynthesis protein
YP_003253681.1	TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: gka:GK1798 precorrin-4 methylase
YP_003253682.1	KEGG: gka:GK1799 precorrin-2 methylase; TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
YP_003253683.1	KEGG: gtn:GTNG_1689 cobalamin biosynthesis protein CbiET; TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
YP_003253684.1	Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A
YP_003253685.1	PFAM: precorrin-8X methylmutase CbiC/CobH; KEGG: gtn:GTNG_1691 cobalamin biosynthesis protein CbiC
YP_003253686.1	TIGRFAM: precorrin-6x reductase; PFAM: precorrin-6x reductase CbiJ/CobK; KEGG: gtn:GTNG_1692 precorrin-6x reductase
YP_003253687.1	PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: gtn:GTNG_1693 Cbi protein
YP_003253688.1	TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; nitrite and sulphite reductase 4Fe-4S region; KEGG: gka:GK1805 precorrin-3B methylase
YP_003253689.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK1806 cobalt ABC transporter ATP-binding protein
YP_003253690.1	PFAM: cobalt transporter; KEGG: gka:GK1807 cobalt transporter system (permease)
YP_003253691.1	periplasmic cobalt binding component of the cobalt transporter
YP_003253692.1	catalyzes the ATP-dependent transport of cobalt
YP_003253693.1	KEGG: gtn:GTNG_1699  ferredoxin
YP_003253694.1	regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity
YP_003253695.1	PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: gka:GK1814 glycerophosphoryl diester phosphodiesterase
YP_003253696.1	decatenates replicating daughter chromosomes
YP_003253697.1	PFAM: aldo/keto reductase; KEGG: gtn:GTNG_1703 aryl-alcohol dehydrogenase
YP_003253698.1	TIGRFAM: oligoendopeptidase F; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; oligopeptidase F; KEGG: gka:GK1818 thimet oligopeptidase
YP_003253699.1	catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate
YP_003253700.1	PFAM: isochorismatase hydrolase; KEGG: gka:GK1820 pyrazinamidase/nicotinamidase
YP_003253701.1	TIGRFAM: membrane protein insertase, YidC/Oxa1 family; PFAM: hypothetical protein; KEGG: gka:GK1822 stage III sporulation protein J
YP_003253702.1	KEGG: gka:GK1823 hypothetical protein
YP_003253704.1	PFAM: hypothetical protein; TPR repeat-containing protein; hypothetical protein; Sel1 domain protein repeat-containing protein; SMART: Tetratricopeptide repeat; KEGG: gka:GK1824 hypothetical protein
YP_003253705.1	PFAM: BAAT/acyl-CoA thioester hydrolase; KEGG: gka:GK1825 acylglycerol lipase
YP_003253706.1	PFAM: membrane-bound metal-dependent hydrolase; KEGG: gka:GK1826 hypothetical protein
YP_003253707.1	KEGG: gtn:GTNG_1712 respiratory nitrate reductase alpha subunit; TIGRFAM: nitrate reductase, subunit alpha; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region
YP_003253708.1	TIGRFAM: nitrate reductase subunit beta; KEGG: gtn:GTNG_1713 nitrate reductase subunit beta
YP_003253709.1	KEGG: gtn:GTNG_1714 nitrate reductase delta subunit; TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; PFAM: nitrate reductase subunit delta
YP_003253710.1	KEGG: gka:GK1828 nitrate reductase subunit gamma; TIGRFAM: respiratory nitrate reductase, subunit gamma; PFAM: nitrate reductase gamma subunit
YP_003253711.1	catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; functions in tetrapyrrole and heme biosynthesis
YP_003253712.1	KEGG: gka:GK1830 hypothetical protein
YP_003253713.1	TIGRFAM: M6 family metalloprotease domain protein; PFAM: peptidase M6 immune inhibitor A; KEGG: gka:GK1831 metal-dependent protease
YP_003253714.1	PFAM: ATP-binding region ATPase domain protein; 5TM Receptors of the LytS-YhcK type transmembrane region; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gka:GK1832 two-component sensor histidine kinase
YP_003253715.1	KEGG: gka:GK1833 methionyl aminopeptidase; TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24
YP_003253716.1	PFAM: protein of unknown function UPF0047; KEGG: gka:GK1834 hypothetical protein
YP_003253717.1	KEGG: gka:GK1835 hypothetical protein
YP_003253718.1	PFAM: protein of unknown function DUF1980; KEGG: gka:GK1836 hypothetical protein
YP_003253719.1	PFAM: permease; KEGG: gka:GK1837 hypothetical protein
YP_003253720.1	TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose subfamily, IIsubunit alpha; PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose-specific IIsubunit beta; phosphotransferase system EIIC; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: gka:GK1838 PTS system, fructose-specific enzyme II, BC component
YP_003253721.1	TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; KEGG: gka:GK1839 fructose-1-phosphate kinase
YP_003253722.1	PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: gka:GK1840 DeoR family transcriptional regulator
YP_003253723.1	KEGG: gka:GK1841 hypothetical protein; TIGRFAM: diguanylate cyclase; metal dependent phophohydrolase; PFAM: GGDEF domain containing protein; metal-dependent phosphohydrolase HD sub domain; SMART: GGDEF domain containing protein; metal-dependent phosphohydrolase HD region
YP_003253725.1	KEGG: gka:GK1842 hypothetical protein
YP_003253726.1	TIGRFAM: addiction module antidote; PFAM: SpoVT/AbrB domain protein; KEGG: gka:GK1845 hypothetical protein
YP_003253727.1	TIGRFAM: death-on-curing family protein; PFAM: filamentation induced by cAMP protein Fic; KEGG: gka:GK1846 hypothetical protein
YP_003253728.1	KEGG: gka:GK1847 hypothetical protein
YP_003253729.1	TIGRFAM: ferrous iron transporter B; small GTP-binding protein; PFAM: Ferrous iron transporter B domain protein; GTP-binding protein HSR1-related; nucleoside recognition domain protein; Ferrous iron transport B domain protein; KEGG: gka:GK1848 ferrous iron uptake system protein B
YP_003253730.1	PFAM: FeoA family protein; KEGG: gka:GK1849 ferrous iron uptake system protein A
YP_003253731.1	PFAM: sodium symporter; KEGG: gtn:GTNG_1741  transmembrane transporter
YP_003253732.1	PFAM: endonuclease I; KEGG: gka:GK1851 hypothetical protein
YP_003253733.1	PFAM: Na+/H+ antiporter NhaC-like; citrate transporter; KEGG: gka:GK1852 hypothetical protein
YP_003253734.1	PFAM: metallophosphoesterase; KEGG: gtn:GTNG_1743 phosphoesterase
YP_003253735.1	KEGG: gtn:GTNG_1744 hypothetical protein
YP_003253736.1	PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: gka:GK1855 GntR family transcriptional regulator
YP_003253737.1	PFAM: glycoside hydrolase family 1; KEGG: gka:GK1856 beta-glucosidase
YP_003253738.1	KEGG: gka:GK1857 PTS system, cellobiose-specific enzyme II, C component; TIGRFAM: PTS system, cellobiose-specific IIC subunit; PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system EIIC
YP_003253739.1	PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIsubunit alpha; KEGG: gka:GK1858 PTS system, cellobiose-specific enzyme II, A component
YP_003253740.1	PFAM: phosphotransferase system lactose/cellobiose-specific IIsubunit beta; KEGG: gka:GK1859 PTS system, cellobiose-specific enzyme II, B component
YP_003253741.1	PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: gka:GK1860 transcriptional regulator
YP_003253742.1	KEGG: gka:GK1861 hypothetical protein
YP_003253743.1	KEGG: gka:GK1862 hypothetical protein
YP_003253744.1	PFAM: major facilitator superfamily MFS_1; KEGG: gka:GK1865 nitrate/nitrite transporter
YP_003253745.1	PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: gka:GK1866 assimilatory nitrate reductase catalytic subunit
YP_003253746.1	KEGG: gka:GK1867 assimilatory nitrite reductase subunit; TIGRFAM: nitrite reductase [NAD(P)H], small subunit; PFAM: Rieske [2Fe-2S] iron-sulphur domain
YP_003253747.1	TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: gka:GK1868 assimilatory nitrite reductase subunit
YP_003253748.1	KEGG: gka:GK1869 hypothetical protein
YP_003253749.1	PFAM: thioesterase superfamily protein; KEGG: gka:GK1870 hypothetical protein
YP_003253750.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: gka:GK1871 alcohol dehydrogenase
YP_003253751.1	PFAM: beta-lactamase; KEGG: gwc:GWCH70_1494 beta-lactamase
YP_003253752.1	KEGG: gwc:GWCH70_1492 PAS modulated sigma54 specific Fis family transcriptional regulator; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; hypothetical protein; PAS fold domain protein; SMART: AAA ATPase; PAS domain containing protein
YP_003253753.1	PFAM: 2-nitropropane dioxygenase NPD; KEGG: gka:GK1872 oxidoreductase
YP_003253754.1	TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; KEGG: gka:GK1646 transposase
YP_003253755.1	KEGG: gka:GK1873 hypothetical protein
YP_003253756.1	TIGRFAM: xylulokinase; PFAM: carbohydrate kinase, FGGY-like; KEGG: gka:GK1874 xylose kinase (xylulokinase)
YP_003253757.1	catalyzes the interconversion of D-xylose to D-xylulose
YP_003253758.1	PFAM: transposase IS4 family protein; KEGG: gwc:GWCH70_2824 transposase IS4 family protein
YP_003253759.1	PFAM: lipolytic protein G-D-S-L family; KEGG: gtn:GTNG_1759 hypothetical protein
YP_003253760.1	PFAM: protein of unknown function DUF34; KEGG: gtn:GTNG_1760 NGG1-interacting factor 3
YP_003253761.1	KEGG: gtn:GTNG_1761 xylanase T-6; PFAM: glycoside hydrolase family 10; SMART: glycoside hydrolase family 10
YP_003253762.1	PFAM: protein of unknown function DUF624; KEGG: gtn:GTNG_1762 hypothetical protein
YP_003253763.1	Converts D-mannonate to D-mannuronate
YP_003253764.1	catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate
YP_003253765.1	PFAM: transposase IS4 family protein; KEGG: gwc:GWCH70_3382 transposase IS4 family protein
YP_003253766.1	PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: gtn:GTNG_1766 regulatory protein
YP_003253767.1	TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; KEGG: gtn:GTNG_1767 2-keto-3-deoxy-6-phospho-gluconate aldolase
YP_003253768.1	PFAM: PfkB domain protein; KEGG: gtn:GTNG_1768 2-keto-3-deoxy-gluconate kinase
YP_003253769.1	PFAM: glycoside hydrolase family 39; KEGG: gtn:GTNG_1769 beta-xylosidase
YP_003253770.1	PFAM: glycosyl hydrolase 67 middle domain protein; glycosyl hydrolase 67 C-teriminal domain protein; glycoside hydrolase family 67; KEGG: gtn:GTNG_1770 alpha-glucuronidase
YP_003253771.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gtn:GTNG_1771 integral membrane protein
YP_003253772.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gtn:GTNG_1772 hypothetical protein
YP_003253773.1	PFAM: extracellular solute-binding protein family 1; KEGG: gtn:GTNG_1773 extracellular solute-binding protein
YP_003253774.1	KEGG: gtn:GTNG_1774 intra-cellular xylanase; PFAM: glycoside hydrolase family 10; SMART: glycoside hydrolase family 10
YP_003253775.1	PFAM: glycoside hydrolase family 52; KEGG: gtn:GTNG_1775 B-xylosidase
YP_003253776.1	PFAM: polysaccharide deacetylase; KEGG: gtn:GTNG_1776 xylanase/chitin deacetylase
YP_003253777.1	PFAM: aldose 1-epimerase; KEGG: gka:GK1877 aldose 1-epimerase
YP_003253778.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gtn:GTNG_1778 sugar ABC transporter (permease)
YP_003253779.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gtn:GTNG_1779 sugar ABC transporter (permease)
YP_003253780.1	PFAM: extracellular solute-binding protein family 1; KEGG: gtn:GTNG_1780 sugar ABC transporter sugar-binding protein
YP_003253781.1	KEGG: gka:GK1903 transposase
YP_003253782.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; KEGG: gtn:GTNG_1781 two-component response regulator
YP_003253783.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: gtn:GTNG_1782 two-component sensor histidine kinase
YP_003253784.1	PFAM: protein of unknown function DUF1680; KEGG: bcl:ABC1212 hypothetical protein
YP_003253785.1	PFAM: 3-dehydroquinate synthase; KEGG: gtn:GTNG_1788 L-arabinose utilization protein
YP_003253786.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: haloacid dehalogenase; KEGG: gtn:GTNG_1789 AraL protein
YP_003253787.1	PFAM: aldose 1-epimerase; KEGG: gka:GK1877 aldose 1-epimerase
YP_003253788.1	PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: gka:GK1878 oxidoreductase
YP_003253789.1	PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: gtn:GTNG_1791 alpha-L-arabinofuranosidase
YP_003253790.1	KEGG: bha:BH1876 hypothetical protein
YP_003253791.1	PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: bsu:BSU28510 alpha-L-arabinosidase
YP_003253792.1	KEGG: pjd:Pjdr2_4105 hypothetical protein
YP_003253793.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: csc:Csac_1559 binding-protein-dependent transport systems inner membrane component
YP_003253794.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: jde:Jden_0512 binding-protein-dependent transport systems inner membrane component
YP_003253795.1	PFAM: extracellular solute-binding protein family 1; KEGG: jde:Jden_0513 extracellular solute-binding protein family 1
YP_003253796.1	PFAM: glycoside hydrolase family 43; KEGG: bld:BLi03029 hypothetical protein
YP_003253797.1	KEGG: bha:BH1870 hypothetical protein
YP_003253798.1	catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism
YP_003253799.1	catalyzes the phosphorylation of ribulose to ribulose 5-phosphate
YP_003253800.1	catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
YP_003253801.1	PFAM: regulatory protein GntR HTH; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein GntR HTH; KEGG: gka:GK1907 arabinose metabolism transcriptional repressor
YP_003253802.1	PFAM: Integrase catalytic region; KEGG: gka:GK0783 hypothetical protein
YP_003253803.1	PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: gka:GK0784 hypothetical protein
YP_003253804.1	catalyzes the removal of 5-oxoproline from various penultimate amino acid residues except L-proline
YP_003253805.1	KEGG: bbe:BBR47_17680 hypothetical membrane protein
YP_003253806.1	PFAM: extracellular solute-binding protein family 5; KEGG: bbe:BBR47_26780 oligopeptide ABC transporter substrate binding protein precursor
YP_003253807.1	KEGG: bbe:BBR47_28370 oligopeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA
YP_003253808.1	KEGG: bbe:BBR47_26760 oligopeptide ABC transporter ATP binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA
YP_003253809.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bbe:BBR47_26750 oligopeptide ABC transporter permease
YP_003253810.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bbe:BBR47_28340 oligopeptide ABC transporter permease
YP_003253811.1	PFAM: peptidase M55 D-aminopeptidase; KEGG: aoe:Clos_1006 peptidase M55 D-aminopeptidase
YP_003253812.1	PFAM: transcription regulator, AsnC-type-like; SMART: transcription regulator, AsnC-type; KEGG: bbe:BBR47_05480 transcriptional regulator
YP_003253813.1	PFAM: amidohydrolase; amidohydrolase; KEGG: bha:BH3008 hypothetical protein
YP_003253814.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
YP_003253815.1	PFAM: glycosyl transferase family 39; KEGG: gka:GK1918 hypothetical protein
YP_003253816.1	PFAM: aldehyde dehydrogenase; KEGG: gka:GK1919 aldehyde dehydrogenase
YP_003253817.1	PFAM: Na+/solute symporter; KEGG: gtn:GTNG_1827 sodium:solute symport protein
YP_003253818.1	catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate
YP_003253819.1	KEGG: bbe:BBR47_57540 probable 4-aminobutyrate aminotransferase; TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III
YP_003253820.1	KEGG: gtn:GTNG_1829 transcriptional regulator; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; hypothetical protein; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA
YP_003253821.1	TIGRFAM: agmatinase; PFAM: arginase/agmatinase/formiminoglutamase; KEGG: gtn:GTNG_1830 guanidinobutyrase
YP_003253822.1	PFAM: aldehyde dehydrogenase; KEGG: bwe:BcerKBAB4_3176 aldehyde dehydrogenase
YP_003253823.1	PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: pmy:Pmen_1794 permease for cytosine/purine, uracil, thiamine, allantoin
YP_003253824.1	PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: nitrilase (predicted)
YP_003253825.1	PFAM: cyclase family protein; KEGG: gka:GK1920 hypothetical protein
YP_003253826.1	catalyzes the formation of pyruvate from serine
YP_003253827.1	PFAM: major facilitator superfamily MFS_1; KEGG: gka:GK1923 multidrug-efflux transporter
YP_003253828.1	PFAM: GCN5-related N-acetyltransferase; KEGG: gka:GK1924 hypothetical protein
YP_003253829.1	KEGG: gka:GK1925 urease accessory protein
YP_003253830.1	PFAM: Urease accessory protein UreD; KEGG: gka:GK1926 urease accessory protein
YP_003253831.1	TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; KEGG: gka:GK1927 urease accessory protein
YP_003253832.1	PFAM: Urease accessory protein UreF; KEGG: gka:GK1928 urease accessory protein
YP_003253833.1	involved in the assembly of the urease metallocenter; nickel donor
YP_003253834.1	ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits
YP_003253835.1	ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta); in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) is involved with urease activity, optimum growth, resistance to low-pH killing in-vitro and persistence in-vivo, while the other operon does not seem to be active
YP_003253836.1	KEGG: gka:GK1932 urease subunit gamma; TIGRFAM: urease subunit gamma; PFAM: Urease subunit gamma region
YP_003253837.1	KEGG: gka:GK1933 ABC transporter ATP-binding protein; TIGRFAM: urea ABC transporter ATP-binding protein UrtE; PFAM: ABC transporter related; SMART: ATPase AAA
YP_003253838.1	KEGG: gka:GK1934 ABC transporter ATP-binding protein; TIGRFAM: urea ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: ATPase AAA
YP_003253839.1	TIGRFAM: urea ABC transporter permease; PFAM: inner-membrane translocator; KEGG: gka:GK1935 ABC transporter (permease)
YP_003253840.1	TIGRFAM: urea ABC transporter permease; PFAM: inner-membrane translocator; KEGG: gka:GK1936 ABC transporter (permease)
YP_003253841.1	TIGRFAM: urea ABC transporter substrate-binding protein; PFAM: extracellular ligand-binding receptor; KEGG: gka:GK1937 ABC transporter (substrate-binding protein)
YP_003253842.1	PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: gka:GK1938 methyl-accepting chemotaxis protein
YP_003253843.1	TIGRFAM: gluconate transporter; PFAM: gluconate transporter; citrate transporter; KEGG: gwc:GWCH70_1484 gluconate transporter
YP_003253844.1	KEGG: gka:GK1941 gluconokinase; TIGRFAM: gluconate kinase; PFAM: carbohydrate kinase, FGGY-like
YP_003253845.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: gka:GK1942 LacI family transcription regulator
YP_003253846.1	KEGG: lmo:lmo2686 hypothetical protein
YP_003253848.1	KEGG: gka:GK2852 hypothetical protein
YP_003253849.1	PFAM: Auxin Efflux Carrier; KEGG: gtn:GTNG_1838 transporter
YP_003253850.1	PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: gtn:GTNG_1839 response regulator
YP_003253851.1	KEGG: gtn:GTNG_1840 sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; hypothetical protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein
YP_003253852.1	PFAM: protein of unknown function DUF112 transmembrane; KEGG: gtn:GTNG_1841 Tctsubunit alpha of the tripartite tricarboxylate transport(TTT) family
YP_003253853.1	KEGG: gtn:GTNG_1842  tricarboxylate transport protein TctB
YP_003253854.1	PFAM: conserved hypothetical protein; KEGG: gtn:GTNG_1843  tricarboxylic transport TctC
YP_003253855.1	KEGG: gka:GK3276 hypothetical protein
YP_003253856.1	PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: gka:GK1945 mannitol-1-phosphate 5-dehydrogenase
YP_003253857.1	PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: gka:GK1946 PTS system, mannitol-permease II, A component
YP_003253858.1	PFAM: PRD domain protein; Helix-turn-helix type 11 domain protein; regulatory protein DeoR; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: gka:GK1947 transcriptional regulator
YP_003253859.1	PFAM: transposase IS4 family protein; KEGG: gwc:GWCH70_3382 transposase IS4 family protein
YP_003253860.1	KEGG: gka:GK1949 hypothetical protein
YP_003253861.1	PFAM: protein of unknown function UPF0175; KEGG: gka:GK1950 hypothetical protein
YP_003253862.1	TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: gka:GK1951 methylmalonate-semialdehyde dehydrogenase
YP_003253863.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: gka:GK1952 alcohol dehydrogenase
YP_003253864.1	KEGG: gka:GK1953 transcriptional regulator; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; PAS fold domain protein; SMART: ATPase AAA; PAS domain containing protein
YP_003253865.1	PFAM: aldo/keto reductase; KEGG: gka:GK1975 K+ channel subunit beta
YP_003253866.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK1976 glutamine ABC transporter ATP-binding protein
YP_003253867.1	PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; KEGG: gka:GK1977 glutamine ABC transporter (glutamine-binding protein)
YP_003253868.1	TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gka:GK1978 glutamine ABC transporter (permease)
YP_003253869.1	TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gka:GK1979 glutamine ABC transporter (permease)
YP_003253870.1	PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: gka:GK1980 two-component sensor histidine kinase
YP_003253871.1	PFAM: YcbB domain protein; response regulator receiver; SMART: response regulator receiver; KEGG: gka:GK1981 two-component response regulator
YP_003253872.1	PFAM: protein of unknown function DUF871; KEGG: gtn:GTNG_1876 hypothetical protein
YP_003253873.1	PFAM: phosphotransferase system EIIC; phosphotransferase system EIIB/cysteine, phosphorylation site; KEGG: gtn:GTNG_1877 PTS system, sucrose-specific IIBC component
YP_003253874.1	catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway
YP_003253875.1	PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: gtn:GTNG_1879 RpiR family transcriptional regulator
YP_003253876.1	PFAM: YceI family protein; KEGG: gka:GK1982 hypothetical protein
YP_003253877.1	catalyzes the formation of acetoacetate from 3-hydroxybutyrate
YP_003253878.1	PFAM: transcriptional coactivator/pterin dehydratase; KEGG: gka:GK1984 pterin-4-alpha-carbinolamine dehydratase (pterin carbinolamine dehydratase)
YP_003253879.1	PFAM: protein of unknown function DUF820; KEGG: gwc:GWCH70_1335 protein of unknown function DUF820
YP_003253880.1	KEGG: gka:GK1986 lipase
YP_003253881.1	KEGG: gtn:GTNG_1884 squalene-hopene cyclase; TIGRFAM: squalene/oxidosqualene cyclase; PFAM: prenyltransferase/squalene oxidase
YP_003253882.1	PFAM: protein of unknown function DUF2515; KEGG: gtn:GTNG_1885 hypothetical protein
YP_003253883.1	KEGG: gtn:GTNG_1887  rhamnogalacturonan acetylesterase
YP_003253884.1	PFAM: sodium symporter; KEGG: gka:GK1988 sodium dependent transporter
YP_003253885.1	PFAM: amidohydrolase; amidohydrolase; KEGG: gka:GK1989 adenine deaminase
YP_003253886.1	PFAM: thioesterase superfamily protein; KEGG: gka:GK1990 4-hydroxybenzoyl-CoA thioesterase
YP_003253887.1	TIGRFAM: benzoate-CoA ligase family; PFAM: AMP-dependent synthetase and ligase; KEGG: gka:GK1991 hypothetical protein
YP_003253888.1	PFAM: enoyl-CoA hydratase/isomerase; KEGG: gka:GK1992 enoyl-CoA hydratase
YP_003253889.1	KEGG: gka:GK1993 phenylacetic acid catabolism protein
YP_003253890.1	KEGG: rxy:Rxyl_1754 hypothetical protein
YP_003253891.1	PFAM: protein of unknown function DUF59; KEGG: gka:GK1994 hypothetical protein
YP_003253892.1	PFAM: phenylacetic acid catabolic family protein; KEGG: gka:GK1995 phenylacetic acid catabolism protein
YP_003253893.1	PFAM: beta-lactamase; KEGG: gka:GK1996 hypothetical protein
YP_003253894.1	PFAM: PaaX domain protein domain; PaaX domain protein; KEGG: gka:GK1997 repressor in the phenylacetic acid catabolism
YP_003253895.1	PFAM: aldehyde dehydrogenase; KEGG: gka:GK2000 aldehyde dehydrogenase
YP_003253896.1	KEGG: gtn:GTNG_1900 hypothetical protein
YP_003253897.1	KEGG: gka:GK2001 hypothetical protein
YP_003253898.1	TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; KEGG: gka:GK1646 transposase
YP_003253899.1	TIGRFAM: LPXTG-motif cell wall anchor domain protein; KEGG: gka:GK2002 hypothetical protein
YP_003253900.1	TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B; KEGG: gka:GK2003 hypothetical protein
YP_003253901.1	PFAM: capsule synthesis protein, CapA; KEGG: gka:GK2004 poly-gamma-glutamate biosynthesis (capsule formation)
YP_003253902.1	KEGG: gka:GK2005 hypothetical protein
YP_003253903.1	PFAM: extracellular solute-binding protein family 1; KEGG: gwc:GWCH70_1392 extracellular solute-binding protein family 1
YP_003253904.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gwc:GWCH70_1391 binding-protein-dependent transport systems inner membrane component
YP_003253905.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gwc:GWCH70_1390 binding-protein-dependent transport systems inner membrane component
YP_003253906.1	PFAM: ABC transporter; SMC domain protein; transport-associated OB domain protein; SMART: ATPase AAA; KEGG: gwc:GWCH70_1389 ABC transporter
YP_003253907.1	TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region; major facilitator superfamily MFS_1; KEGG: gka:GK2020 di-tripeptide ABC transporter (permease)
YP_003253909.1	KEGG: gka:GK2022 hypothetical protein
YP_003253910.1	PFAM: transketolase; transketolase domain protein; KEGG: gtn:GTNG_1911 pyruvate decarboxylase subunit beta-like protein
YP_003253911.1	KEGG: gka:GK2027 pyruvate dehydrogenase E1 (lipoamide) subunit alpha; TIGRFAM: pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha; PFAM: dehydrogenase E1 component
YP_003253912.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK2028 ABC transporter ATP-binding protein
YP_003253913.1	PFAM: inner-membrane translocator; KEGG: gka:GK2029 ABC transporter (permease)
YP_003253914.1	PFAM: protein of unknown function DUF534; KEGG: gka:GK2030 ABC transporter (substrate-binding protein)
YP_003253915.1	PFAM: Glu/Leu/Phe/Val dehydrogenase dimerisation region; Glu/Leu/Phe/Val dehydrogenase; KEGG: gka:GK2031 phenylalanine dehydrogenase
YP_003253916.1	PFAM: 2-nitropropane dioxygenase NPD; KEGG: gka:GK2032 hypothetical protein
YP_003253917.1	TIGRFAM: phenylacetic acid degradation operon negative regulatory protein PaaX; PFAM: PaaX domain protein domain; PaaX domain protein; KEGG: gka:GK2034 repressor in the phenylacetic acid catabolism
YP_003253918.1	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis
YP_003253919.1	converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA
YP_003253920.1	PFAM: aldehyde dehydrogenase; KEGG: gka:GK2037 aldehyde dehydrogenase
YP_003253921.1	PFAM: enoyl-CoA hydratase/isomerase; KEGG: gka:GK2038 enoyl-CoA hydratase subunit II (phenylacetic acid catabolism)
YP_003253922.1	PFAM: enoyl-CoA hydratase/isomerase; KEGG: gka:GK2039 enoyl-CoA hydratase subunit I (phenylacetic acid catabolism)
YP_003253923.1	PFAM: Ethyl tert-butyl ether degradation EthD; KEGG: gka:GK2040 hypothetical protein
YP_003253924.1	TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: protein of unknown function DUF59; KEGG: gka:GK2041 ring-oxidation complex protein 3 (phenylacetic acid catabolism)
YP_003253925.1	TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: gka:GK2042 ring-oxidation complex protein 2 (phenylacetic acid catabolism)
YP_003253926.1	TIGRFAM: phenylacetate-CoA oxygenase, PaaH subunit; PFAM: phenylacetic acid degradation B; KEGG: gka:GK2043 phenylacetic acid catabolism protein
YP_003253927.1	with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA
YP_003253928.1	KEGG: gka:GK2045 phenylacetyl-CoA ligase (phenylacetic acid catabolism); TIGRFAM: phenylacetate-CoA ligase; PFAM: AMP-dependent synthetase and ligase
YP_003253929.1	catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis
YP_003253930.1	catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis
YP_003253931.1	Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway
YP_003253932.1	PFAM: GtrA family protein; KEGG: gka:GK2051 hypothetical protein
YP_003253933.1	PFAM: glycosyl transferase family 2; KEGG: gka:GK2052 glycosyltransferase
YP_003253934.1	KEGG: bsu:BSU40490 hypothetical protein
YP_003253935.1	KEGG: gka:GK2053 hypothetical protein
YP_003253936.1	KEGG: gka:GK2054 hypothetical protein
YP_003253937.1	catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis
YP_003253938.1	catalyzes the dehydration of 3-dehydroquinate to form 3-dehydroshikimate in aromatic amino acid biosynthesis
YP_003253940.1	TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase type 3; haloacid dehalogenase; sucrose-6F-phosphate phosphohydrolase; KEGG: gka:GK2059 hypothetical protein
YP_003253941.1	PFAM: plasmid pRiA4b ORF-3 family protein; KEGG: gwc:GWCH70_2027 plasmid pRiA4b ORF-3 family protein
YP_003253942.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: gka:GK2061 hypothetical protein
YP_003253943.1	PFAM: fatty acid desaturase; KEGG: gka:GK2062 hypothetical protein
YP_003253944.1	PFAM: protein of unknown function DUF302; KEGG: gka:GK2063 hypothetical protein
YP_003253945.1	PFAM: protein of unknown function DUF81; KEGG: gka:GK2064 hypothetical protein
YP_003253946.1	PFAM: SirA family protein; Rhodanese domain protein; SMART: rhodanese; KEGG: gka:GK2066 hypothetical protein
YP_003253947.1	PFAM: rhodanese; SMART: Rhodanese domain protein; KEGG: gka:GK2067 hypothetical protein
YP_003253948.1	PFAM: rhodanese; SMART: Rhodanese domain protein; KEGG: gka:GK2068 hypothetical protein
YP_003253949.1	KEGG: gtn:GTNG_1982 NADH dehydrogenase
YP_003253950.1	PFAM: SirA family protein; KEGG: gtn:GTNG_1983 molybdopterin biosynthesis MoeB-like protein
YP_003253951.1	PFAM: protein of unknown function DUF156; KEGG: gtn:GTNG_1984 hypothetical protein
YP_003253952.1	KEGG: gka:GK2072 hypothetical protein
YP_003253953.1	PFAM: methyltransferase type 11; methyltransferase type 12; methyltransferase; KEGG: gka:GK2073 SAM-dependent methyltransferase
YP_003253954.1	PFAM: beta-lactamase; Rhodanese domain protein; SMART: rhodanese; KEGG: gka:GK2074 hypothetical protein
YP_003253955.1	TIGRFAM: glutaredoxin-like protein, YruB-family; PFAM: glutaredoxin; KEGG: gka:GK2075 glutaredoxin
YP_003253956.1	PFAM: DsrE family protein; KEGG: gka:GK2076 hypothetical protein
YP_003253957.1	PFAM: glycoside hydrolase family 18; peptidoglycan-binding lysin domain; SMART: chitinase II; peptidoglycan-binding LysM; KEGG: gka:GK2077 hypothetical protein
YP_003253958.1	PFAM: protein of unknown function DUF202; KEGG: gka:GK2078 hypothetical protein
YP_003253959.1	PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; redoxin; KEGG: gka:GK2079 thiol:disulfide interchange protein (thioredoxin)
YP_003253960.1	PFAM: cytochrome C biogenesis protein transmembrane region; KEGG: gka:GK2080 cytochrome C biogenesis protein
YP_003253961.1	KEGG: gka:GK2081 hypothetical protein
YP_003253962.1	PFAM: major facilitator superfamily MFS_1; KEGG: gka:GK2082 hypothetical protein
YP_003253963.1	KEGG: gka:GK0606 hypothetical protein
YP_003253964.1	KEGG: gka:GK2083 cytochrome bd-type ubiquinol oxidase subunit II
YP_003253965.1	PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: gka:GK2084 cytochrome bd-type ubiquinol oxidase subunit I
YP_003253966.1	PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: gka:GK2086 two component response regulator
YP_003253967.1	KEGG: gka:GK2087 two-component sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein
YP_003253968.1	PFAM: beta-lactamase; Rhodanese domain protein; SMART: rhodanese; KEGG: gka:GK2088 hypothetical protein
YP_003253969.1	KEGG: gka:GK2089 hypothetical protein
YP_003253970.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gka:GK2090 hypothetical protein
YP_003253971.1	KEGG: gka:GK2091 hypothetical protein; TIGRFAM: CoA-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; rhodanese; SMART: rhodanese
YP_003253972.1	KEGG: gka:GK2093 hypothetical protein
YP_003253973.1	TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bwe:BcerKBAB4_2685 EmrB/QacA family drug resistance transporter
YP_003253974.1	KEGG: gka:GK2095 hypothetical protein
YP_003253975.1	KEGG: gka:GK2096 hypothetical protein
YP_003253976.1	KEGG: gka:GK2097 hypothetical protein
YP_003253977.1	KEGG: gka:GK2098 adenine deaminase; TIGRFAM: adenine deaminase; PFAM: amidohydrolase
YP_003253978.1	KEGG: gwc:GWCH70_2029 hypothetical protein
YP_003253979.1	KEGG: gwc:GWCH70_1414 hypothetical protein
YP_003253980.1	KEGG: gwc:GWCH70_1413 hypothetical protein
YP_003253981.1	PFAM: creatininase; KEGG: gwc:GWCH70_1412 creatininase
YP_003253982.1	PFAM: aryldialkylphosphatase; KEGG: gwc:GWCH70_1411 aryldialkylphosphatase
YP_003253983.1	membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr
YP_003253984.1	PFAM: phosphotransferase system lactose/cellobiose-specific IIsubunit beta; KEGG: gwc:GWCH70_1409 phosphotransferase system lactose/cellobiose-specific IIsubunit beta
YP_003253985.1	PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: gwc:GWCH70_1408  PTS IIA-like nitrogen-regulatory protein PtsN
YP_003253986.1	PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; hypothetical protein; M trans-acting positive regulator; PRD domain protein; KEGG: gwc:GWCH70_1407 PTS modulated transcriptional regulator, MtlR family
YP_003253987.1	KEGG: gka:GK1903 transposase
YP_003253988.1	PFAM: transposase IS4 family protein; KEGG: gka:GK2942 hypothetical protein
YP_003253989.1	catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate
YP_003253990.1	PFAM: protein of unknown function DUF1445; KEGG: gka:GK2103 hypothetical protein
YP_003253991.1	PFAM: type III restriction protein res subunit; helicase domain protein; DEAD/DEAH box helicase; SMART: DEAD-like helicase ; helicase; KEGG: gka:GK2104 DNA/RNA helicase
YP_003253992.1	KEGG: gka:GK2105 hypothetical protein
YP_003253993.1	KEGG: gtn:GTNG_2011 hypothetical protein
YP_003253994.1	KEGG: gtn:GTNG_2012 hypothetical protein
YP_003253995.1	PFAM: xylose isomerase; AP endonuclease 2 domain protein; KEGG: gka:GK2111 hypothetical protein
YP_003253996.1	PFAM: oxidoreductase domain protein; semialdehyde dehydrogenase NAD - binding; oxidoreductase domain; KEGG: gka:GK2112 hypothetical protein
YP_003253997.1	PFAM: protein of unknown function DUF1037; KEGG: gka:GK2113 hypothetical protein
YP_003253998.1	PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: gka:GK2114 oxidoreductase
YP_003253999.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: gka:GK2115 transcriptional regulator
YP_003254000.1	PFAM: GCN5-related N-acetyltransferase; KEGG: gka:GK2117 acetyl transferase
YP_003254001.1	PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: gka:GK2118 metabolite transporter
YP_003254002.1	PFAM: MaoC domain protein dehydratase; KEGG: gka:GK2120 hypothetical protein
YP_003254003.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gka:GK2121 ABC transporter (permease)
YP_003254004.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gka:GK2122 ABC transporter (permease)
YP_003254005.1	PFAM: extracellular solute-binding protein family 1; KEGG: gka:GK2123 ABC transporter (substrate-binding protein)
YP_003254006.1	KEGG: gka:GK2124 hypothetical protein
YP_003254007.1	catalyzes the formation of glutamate from glutamine
YP_003254008.1	PFAM: protein of unknown function DUF820; KEGG: gka:GK2126 hypothetical protein
YP_003254009.1	PFAM: protein of unknown function DUF820; KEGG: gka:GK2127 hypothetical protein
YP_003254010.1	KEGG: ribosomal protein S9
YP_003254011.1	PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: gwc:GWCH70_0167 transposase IS204/IS1001/IS1096/IS1165 family protein
YP_003254012.1	catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine
YP_003254013.1	SASP H; spore coat; expressed in forespore compartment
YP_003254014.1	KEGG: gka:GK2130 hypothetical protein
YP_003254015.1	PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gka:GK2131 hypothetical protein
YP_003254016.1	PFAM: protein of unknown function UCP033101; KEGG: gka:GK2132 hypothetical protein
YP_003254017.1	PFAM: protein of unknown function DUF1648; KEGG: gtn:GTNG_2029 hypothetical protein
YP_003254018.1	PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: gka:GK2134 transcriptional regulator
YP_003254019.1	PFAM: carboxyl transferase; KEGG: gka:GK2135 methylmalonyl-CoA decarboxylase
YP_003254020.1	PFAM: AMP-dependent synthetase and ligase; KEGG: gka:GK2136 long-chain fatty-acid-CoA ligase
YP_003254021.1	PFAM: DoxX family protein; TQO small subunit DoxD; KEGG: gka:GK2137 hypothetical protein
YP_003254023.1	KEGG: gka:GK1138 hypothetical protein
YP_003254024.1	KEGG: gka:GK1139 hypothetical protein
YP_003254025.1	KEGG: gka:GK1140 hypothetical protein
YP_003254026.1	KEGG: gka:GK1141 hypothetical protein
YP_003254027.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK2364 ABC transporter ATP-binding protein
YP_003254028.1	KEGG: gka:GK2365 hypothetical protein
YP_003254029.1	PFAM: peptidase M29 aminopeptidase II; KEGG: gka:GK2140 leucyl aminopeptidase II
YP_003254030.1	KEGG: gka:GK2141 hypothetical protein
YP_003254031.1	KEGG: spi:MGAS10750_Spy1919 hypothetical protein
YP_003254032.1	KEGG: cth:Cthe_2476 SPP1 family phage head morphogenesis protein
YP_003254033.1	PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: gwc:GWCH70_2089 transposase IS116/IS110/IS902 family protein
YP_003254034.1	involved in assembly of spore coat proteins such as GerQ by catalyzing epsilon-(gamma-glutamyl)lysine cross links
YP_003254035.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: gka:GK2915 hypothetical protein
YP_003254036.1	PFAM: MgtC/SapB transporter; KEGG: gka:GK2916 hypothetical protein
YP_003254037.1	TIGRFAM: primosome, DnaD subunit; PFAM: DnaD and phage-associated region; KEGG: gka:GK2917 hypothetical protein
YP_003254038.1	PFAM: nuclease (SNase domain protein); SMART: nuclease (SNase domain protein); KEGG: gka:GK2918 hypothetical protein
YP_003254039.1	KEGG: gka:GK2919 hypothetical protein
YP_003254040.1	PFAM: GCN5-related N-acetyltransferase; KEGG: gka:GK2920 phosphinothricin N-acetyltransferase
YP_003254041.1	TIGRFAM: small acid-soluble spore protein, H-type; PFAM: small acid-soluble spore H family protein; KEGG: gtn:GTNG_2874 hypothetical protein
YP_003254042.1	PFAM: ion transport 2 domain protein ; TrkA-N domain protein; KEGG: gka:GK2922 potassium channel protein
YP_003254043.1	PFAM: protein of unknown function YugN-like; KEGG: gka:GK2923 hypothetical protein
YP_003254044.1	PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: gwc:GWCH70_2089 transposase IS116/IS110/IS902 family protein
YP_003254045.1	functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family
YP_003254046.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: gka:GK2925 NADH-dependent butanol dehydrogenase
YP_003254047.1	PFAM: protein of unknown function DUF378; KEGG: gka:GK2926 hypothetical protein
YP_003254048.1	induced by heat shock, salt stress, oxidative stress, glucose limitation and oxygen limitation
YP_003254049.1	PFAM: aminotransferase class I and II; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: gka:GK2928 hypothetical protein
YP_003254050.1	PFAM: transcription regulator, AsnC-type-like; SMART: transcription regulator, AsnC-type; KEGG: gka:GK2929 AsnC/Lrp family transcriptional regulator
YP_003254051.1	PFAM: Domain of unknown function DUF1871; KEGG: gka:GK2930 hypothetical protein
YP_003254052.1	PFAM: aminotransferase class I and II; KEGG: gka:GK2931 aminotransferase
YP_003254053.1	PFAM: superoxide dismutase copper/zinc binding; KEGG: gka:GK2932 superoxide dismutase (Cu/Zn)
YP_003254054.1	KEGG: gka:GK2933 hypothetical protein
YP_003254055.1	inhibitor of the KinA pathway of sporulation
YP_003254056.1	KEGG: gka:GK2935 hypothetical protein
YP_003254057.1	PFAM: citrate transporter; sodium/sulfate symporter; Arsenical pump membrane protein; KEGG: gka:GK2936 hypothetical protein
YP_003254058.1	KEGG: gka:GK2937 hypothetical protein
YP_003254061.1	KEGG: gka:GK2943 hypothetical protein
YP_003254062.1	PFAM: BioY protein; KEGG: gka:GK2944 biotin biosynthesis protein
YP_003254063.1	PFAM: phosphate transporter; KEGG: gwc:GWCH70_2876 phosphate transporter
YP_003254064.1	PFAM:  phosphate transport regulator; KEGG: gka:GK2946 hypothetical protein
YP_003254065.1	catalyzes the removal of N-terminal amino acids preferably leucine from various peptides
YP_003254066.1	PFAM: periplasmic binding protein; KEGG: gka:GK2948 ABC transporter (substrate-binding protein)
YP_003254067.1	PFAM: 3D domain protein; KEGG: gka:GK2949 hypothetical protein
YP_003254068.1	KEGG: gka:GK2950 hypothetical protein
YP_003254069.1	KEGG: gka:GK2951 hypothetical protein
YP_003254070.1	PFAM: NUDIX hydrolase; KEGG: gka:GK2952 hypothetical protein
YP_003254071.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gka:GK2953 NADH dehydrogenase
YP_003254072.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gka:GK2954 thioredoxin reductase
YP_003254073.1	KEGG: gka:GK2955 hypothetical protein
YP_003254074.1	TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: gka:GK2956 hypothetical protein
YP_003254075.1	involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate
YP_003254076.1	PFAM: protein of unknown function DUF1450; KEGG: gka:GK2958 hypothetical protein
YP_003254077.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gka:GK2959 NADH dehydrogenase
YP_003254078.1	PFAM: conserved hypothetical protein; KEGG: gka:GK2960 hypothetical protein
YP_003254079.1	PFAM: nitrogen-fixing NifU domain protein; KEGG: gtn:GTNG_2911 nitrogen fixation protein NifU
YP_003254081.1	catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate
YP_003254082.1	catalyzes the formation of L-threonine from O-phospho-L-homoserine
YP_003254083.1	catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine
YP_003254084.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: gka:GK2965 2-hydroxyacid dehydrogenase
YP_003254085.1	TIGRFAM: spore coat protein YutH; KEGG: gka:GK2966 hypothetical protein
YP_003254086.1	PFAM: phosphatidylglycerophosphatase A; KEGG: gka:GK2967 hypothetical protein
YP_003254087.1	TIGRFAM: HAD-superfamily subfamily IIA hydrolase like protein; HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: gka:GK2968 hypothetical protein
YP_003254088.1	PFAM: protein of unknown function DUF86; KEGG: gka:GK2969 hypothetical protein
YP_003254089.1	KEGG: gka:GK2970 hypothetical protein
YP_003254090.1	KEGG: gka:GK2971 hypothetical protein
YP_003254091.1	PFAM: protein of unknown function DUF1027; KEGG: gka:GK2972 hypothetical protein
YP_003254092.1	PFAM: sporulation lipoprotein YhcN/YlaJ-like; KEGG: gka:GK2973 hypothetical protein
YP_003254093.1	catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group
YP_003254094.1	PFAM: peptidase M23; KEGG: gka:GK2975 hypothetical protein
YP_003254095.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK2976 branched-chain amino acid ABC transporter ATP-binding protein
YP_003254096.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK2977 branched-chain amino acid ABC transporter ATP-binding protein
YP_003254097.1	PFAM: inner-membrane translocator; KEGG: gka:GK2978 branched-chain amino acid ABC transporter (permease)
YP_003254098.1	PFAM: inner-membrane translocator; KEGG: gka:GK2979 branched-chain amino acid ABC transporter (permease)
YP_003254099.1	PFAM: extracellular ligand-binding receptor; KEGG: gka:GK2980 branched chain amino acid ABC transporter (substrate-binding protein)
YP_003254100.1	TIGRFAM: sporulation protein YunB; PFAM: sporulation protein YunB-like; KEGG: gka:GK2981 hypothetical protein
YP_003254101.1	PFAM: Domain of unknown function DUF1805; KEGG: gka:GK2982 hypothetical protein
YP_003254102.1	PFAM: metallophosphoesterase; 5'-nucleotidase domain protein; KEGG: gka:GK2983 hypothetical protein
YP_003254103.1	PFAM: protein of unknown function DUF81; KEGG: gka:GK2984 hypothetical protein
YP_003254104.1	PFAM: protein of unknown function DUF72; KEGG: gka:GK2985 hypothetical protein
YP_003254105.1	PFAM: lysine exporter (LYSE/YGGA); KEGG: gka:GK2986 transporter
YP_003254106.1	KEGG: gka:GK2987 hypothetical protein
YP_003254107.1	KEGG: gka:GK2988 hypothetical protein
YP_003254108.1	PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: gka:GK0784 hypothetical protein
YP_003254109.1	KEGG: gka:GK0783 hypothetical protein
YP_003254110.1	KEGG: gka:GK0389 hypothetical protein
YP_003254111.1	TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: gka:GK2991 hypothetical protein
YP_003254112.1	TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; KEGG: gka:GK2992 nitrogen fixation protein (NifU protein)
YP_003254113.1	TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: gka:GK2993 cysteine desulfurase
YP_003254114.1	TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: gka:GK2994 hypothetical protein
YP_003254115.1	KEGG: gka:GK2995 ABC transporter ATP-binding protein; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: ATPase AAA
YP_003254116.1	TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: carboxymuconolactone decarboxylase; KEGG: gka:GK2996 hypothetical protein
YP_003254117.1	KEGG: gtn:GTNG_2948 hypothetical protein
YP_003254118.1	PFAM: NLPA lipoprotein; KEGG: gka:GK2997 amino acid ABC transporter (substrate binding protein) (lipoprotein)
YP_003254119.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gka:GK2998 ABC transporter (permease)
YP_003254120.1	PFAM: ABC transporter; NIL domain; SMART: AAA ATPase; KEGG: gka:GK2999 ABC transporter ATP-binding protein
YP_003254121.1	KEGG: gka:GK3000 hypothetical protein
YP_003254122.1	KEGG: gka:GK3001 thioredoxin
YP_003254123.1	PFAM: TOPRIM domain protein; SMART: Toprim sub domain protein; KEGG: gka:GK3002 hypothetical protein
YP_003254124.1	KEGG: gka:GK3003 hypothetical protein
YP_003254125.1	part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor
YP_003254126.1	PFAM: arsenate reductase; glutaredoxin; KEGG: gka:GK3005 arsenate reductase
YP_003254127.1	PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: gka:GK3006 acetyl-CoA dehydrogenase
YP_003254128.1	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation
YP_003254129.1	PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: gka:GK3008 3-hydroxyacyl-CoA dehydrogenase
YP_003254130.1	KEGG: gka:GK3009 hypothetical protein
YP_003254131.1	PFAM: Proline dehydrogenase; KEGG: gka:GK3010 proline dehydrogenase
YP_003254132.1	KEGG: gka:GK3011 hypothetical protein
YP_003254133.1	PFAM: Coat F domain protein; KEGG: gka:GK3012 hypothetical protein
YP_003254134.1	KEGG: gka:GK3013 hypothetical protein
YP_003254135.1	KEGG: gka:GK3014 hypothetical protein
YP_003254136.1	PFAM: aminotransferase class-III; KEGG: gka:GK3016 adenosylmethionine-8-amino-7-oxononanoate aminotransferase
YP_003254137.1	TIGRFAM: dethiobiotin synthase; KEGG: gka:GK3017 dethiobiotin synthetase
YP_003254138.1	PFAM: BioY protein; KEGG: gka:GK3018 biotin biosynthesis protein
YP_003254139.1	catalyzes the formation of phosphoenolpyruvate from pyruvate
YP_003254140.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: gka:GK3020 hypothetical protein
YP_003254141.1	PFAM: flavin reductase domain protein FMN-binding; KEGG: gka:GK3021 hypothetical protein
YP_003254142.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK3022 branched chain amino acid ABC transporter ATP-binding protein
YP_003254143.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK3023 branched chain amino acid ABC transporter ATP-binding protein
YP_003254144.1	PFAM: inner-membrane translocator; KEGG: gka:GK3024 branched amino acid ABC transporter (permease)
YP_003254145.1	PFAM: inner-membrane translocator; KEGG: gka:GK3025 branched amino acid ABC transporter (permease)
YP_003254146.1	PFAM: extracellular ligand-binding receptor; KEGG: gka:GK3026 branched amino acid ABC transporter (substrate-binding protein)
YP_003254147.1	PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: gka:GK3027 transcriptional regulator
YP_003254148.1	TIGRFAM: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: gka:GK3028 5-carboxy-2-hydroxymuconate semialdehyde dehydrogenase
YP_003254149.1	PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase; KEGG: gka:GK3029 5-carboxymethyl-2-hydroxymuconate isomerase
YP_003254150.1	KEGG: gka:GK3030 hypothetical protein; TIGRFAM: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase,HpaG2 subunit; PFAM: fumarylacetoacetate hydrolase
YP_003254151.1	KEGG: gka:GK3031 hypothetical protein; TIGRFAM: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, HpaG1 subunit; PFAM: fumarylacetoacetate hydrolase
YP_003254152.1	KEGG: gka:GK3032 dihydrodipicolinate synthase; TIGRFAM: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase
YP_003254153.1	TIGRFAM: 3,4-dihydroxyphenylacetate 2,3-dioxygenase; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gka:GK3033 3,4-dihydroxyphenylacetate 2,3-dioxygenase
YP_003254154.1	TIGRFAM: 4-hydroxyphenylacetate 3-monooxygenase, oxygenase subunit; PFAM: 4-hydroxyphenylacetate 3-hydroxylase; KEGG: gka:GK3034 4-hydroxyphenylacetate-3-hydroxylase
YP_003254155.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: gka:GK3035 LysR family transcriptional regulator
YP_003254156.1	PFAM: manganese containing catalase; KEGG: gka:GK3036 manganese catalase
YP_003254157.1	KEGG: gka:GK3037 hypothetical protein
YP_003254158.1	PFAM: propeptide PepSY amd peptidase M4; PepSY-associated TM helix domain protein; KEGG: gka:GK3038 hypothetical protein
YP_003254159.1	PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: gka:GK3039 hypothetical protein
YP_003254160.1	KEGG: gka:GK3040 hypothetical protein
YP_003254161.1	KEGG: gka:GK3041 hypothetical protein
YP_003254162.1	KEGG: lsp:Bsph_4736 hypothetical protein
YP_003254163.1	KEGG: cth:Cthe_1977 hypothetical protein
YP_003254164.1	binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation
YP_003254165.1	KEGG: gka:GK3044 ribonuclease R; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease; PFAM: ribonuclease II; ribonuclease B OB region domain; RNA binding S1 domain protein; SMART: Cold shock protein
YP_003254166.1	KEGG: gka:GK3045 carboxylesterase
YP_003254167.1	TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: gka:GK3046 preprotein translocase subunit SecG
YP_003254168.1	KEGG: gka:GK3048 hypothetical protein
YP_003254169.1	PFAM: carboxylesterase type B; KEGG: gka:GK3049 thermostable carboxylesterase
YP_003254170.1	KEGG: gka:GK3051 hypothetical protein
YP_003254171.1	KEGG: gka:GK3053 hypothetical protein
YP_003254172.1	enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis
YP_003254173.1	catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
YP_003254174.1	Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate
YP_003254175.1	Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway
YP_003254176.1	KEGG: gka:GK3058 glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase; PFAM: glyceraldehyde 3-phosphate dehydrogenase; dihydrodipicolinate reductase
YP_003254177.1	PFAM:  sugar-binding domain protein; KEGG: gka:GK3059 transcriptional regulator (central glycolytic gene regulator)
YP_003254178.1	PFAM: glutaredoxin 2; glutaredoxin; KEGG: gka:GK3060 hypothetical protein
YP_003254179.1	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen
YP_003254180.1	KEGG: gwc:GWCH70_0577 transposase IS4 family protein
YP_003254182.1	hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates
YP_003254183.1	TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: gka:GK3063 phosphocarrier protein Chr
YP_003254184.1	PFAM: protein of unknown function DUF199; sporulation regulator WhiA-like; KEGG: gka:GK3064 hypothetical protein
YP_003254185.1	PFAM: protein of unknown function UPF0052 and CofD; KEGG: gka:GK3065 hypothetical protein
YP_003254186.1	PFAM: conserved hypothetical protein; KEGG: gka:GK3066 hypothetical protein
YP_003254187.1	PFAM: NUDIX hydrolase; KEGG: gka:GK3067 NTP pyrophosphohydrolase including oxidative damage repair enzyme
YP_003254188.1	TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; KEGG: gka:GK3068 thioredoxin reductase
YP_003254189.1	PFAM: hypothetical protein; TPR repeat-containing protein; SMART: Tetratricopeptide repeat; KEGG: gka:GK3069 hypothetical protein
YP_003254190.1	catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis
YP_003254191.1	catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase
YP_003254192.1	catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide
YP_003254193.1	with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide
YP_003254194.1	catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis
YP_003254195.1	catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer
YP_003254196.1	short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ
YP_003254197.1	May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
YP_003254201.1	PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: bbe:BBR47_58280  groupII intron-encoded protein
YP_003254202.1	PFAM: VanZ family protein; KEGG: bca:BCE_2684 VanZ protein
YP_003254203.1	PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: gwc:GWCH70_0167 transposase IS204/IS1001/IS1096/IS1165 family protein
YP_003254204.1	PFAM: transferase hexapeptide repeat containing protein; KEGG: gka:GK3078 acetyltransferase
YP_003254205.1	hydrolyzes pyrophosphate formed during serine-46-phosphorylated HPr dephosphorylation
YP_003254206.1	PFAM: nucleoside recognition domain protein; KEGG: gka:GK3080 hypothetical protein
YP_003254207.1	transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein
YP_003254208.1	catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system
YP_003254209.1	PFAM: membrane protein of unknown function; KEGG: gka:GK3083 hypothetical protein
YP_003254210.1	KEGG: gka:GK3084 hypothetical protein
YP_003254211.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrsubunit betas scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
YP_003254212.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-subunit beta is inserted between the strands, where it probes for the presence of a lesion
YP_003254213.1	PFAM: protein of unknown function DUF2198; KEGG: gka:GK3087 hypothetical protein
YP_003254214.1	SMART: PDZ/DHR/GLGF domain protein; KEGG: gka:GK3088 hypothetical protein
YP_003254215.1	remodeling and anchoring of the chromosome protein; in Bacillus subtilis this protein functions in polar chromosome segregation during sporulation; binds inverted sequence motifs called ram along the chromosome; condenses DNA via RacA-RacA interactions
YP_003254216.1	KEGG: gka:GK3090 hypothetical protein
YP_003254217.1	PFAM: glycosyl transferase family 2; KEGG: gka:GK3091 glycosyltransferase
YP_003254218.1	KEGG: gka:GK3092 carboxyl-terminal processing protease; TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; peptidoglycan-binding protein; PDZ/DHR/GLGF domain protein; SMART: peptidase S41; PDZ/DHR/GLGF domain protein
YP_003254219.1	PFAM: pirin; KEGG: gka:GK3094 hypothetical protein
YP_003254220.1	KEGG: hau:Haur_2819 ATPase AAA containing von Willebrand factor A (vWA) protein-like omain
YP_003254221.1	KEGG: gka:GK3095 transcriptional regulator involved in mercury resistance operon; TIGRFAM: Hg(II)-responsive transcriptional regulator; PFAM: transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR
YP_003254222.1	TIGRFAM: mercuric reductase; PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Heavy metal transport/detoxification protein; glucose-inhibited division protein A; KEGG: gka:GK3096 mercuric reductase
YP_003254223.1	KEGG: gka:GK3097 transporter
YP_003254224.1	PFAM: peptidase M23; KEGG: gka:GK3099 hypothetical protein
YP_003254225.1	PFAM: protein of unknown function DUF214; KEGG: gka:GK3100 cell-division protein
YP_003254226.1	KEGG: gka:GK3101 cell-division ATP-binding protein; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: ATPase AAA
YP_003254227.1	PFAM: cytochrome C class I; KEGG: gka:GK3102 cytochrome c551
YP_003254228.1	PFAM: protein of unknown function DUF2179; protein of unknown function DUF161; KEGG: gka:GK3103 hypothetical protein
YP_003254229.1	PFAM: plasmid stabilization system; KEGG: gka:GK3104 hypothetical protein
YP_003254230.1	KEGG: gka:GK3105 hypothetical protein
YP_003254231.1	KEGG: bpm:BURPS1710b_3602 hypothetical protein
YP_003254232.1	functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins
YP_003254233.1	KEGG: gka:GK3108 hypothetical protein
YP_003254234.1	TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: gka:GK3109 ribosomal protein S30EA
YP_003254235.1	PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: gka:GK3110 hypothetical protein
YP_003254236.1	KEGG: gka:GK3112 flagellar protein
YP_003254237.1	flagellin specific chaperone
YP_003254238.1	involved in flagellin assembly
YP_003254239.1	possibly involved in flagella export
YP_003254242.1	KEGG: geo:Geob_0444 hypothetical protein
YP_003254243.1	KEGG: aoe:Clos_2514 glutamine--scyllo-inositol transaminase; TIGRFAM: UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; Cys/Met metabolism pyridoxal-phosphate-dependent protein
YP_003254244.1	PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KEGG: cth:Cthe_2220 NAD-dependent epimerase/dehydratase
YP_003254245.1	KEGG: npu:Npun_R0684 N-acetylneuraminic acid synthase domain-containing protein; TIGRFAM: pseudaminic acid synthase; PFAM: N-acetylneuraminic acid synthase domain; SAF domain protein
YP_003254246.1	TIGRFAM: pseudaminic acid biosynthesis-associated protein PseG; KEGG: bcg:BCG9842_B1722 pseudaminic acid biosynthesis-associated protein PseG
YP_003254247.1	PFAM: acylneuraminate cytidylyltransferase; KEGG: rec:RHECIAT_CH0000838  acylneuraminate cytidylyltransferase (spore coat polysaccharide biosynthesis) protein
YP_003254248.1	PFAM: protein of unknown function DUF201; KEGG: pcu:pc1568 hypothetical protein
YP_003254249.1	PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cbl:CLK_2107 HAD family hydrolase
YP_003254250.1	KEGG: gka:GK3316 UDP-galactopyranose mutase; TIGRFAM: UDP-galactopyranose mutase; PFAM: UDP-galactopyranose mutase-like
YP_003254251.1	KEGG: cac:CAC2170 hypothetical protein
YP_003254252.1	PFAM: glycosyl transferase family 2; KEGG: cac:CAC2171 glycosyltransferase
YP_003254253.1	PFAM: glycosyl transferase family 2; KEGG: cac:CAC2172 glycosyltransferase
YP_003254254.1	KEGG: dsy:DSY3015 hypothetical protein
YP_003254255.1	KEGG: hypothetical protein
YP_003254256.1	PFAM: protein of unknown function DUF115; KEGG: gka:GK3129 hypothetical protein
YP_003254257.1	PFAM: polysaccharide biosynthesis protein CapD; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; NAD-dependent epimerase/dehydratase; KEGG: cth:Cthe_2232 polysaccharide biosynthesis protein CapD
YP_003254258.1	KEGG: aoe:Clos_2516 hypothetical protein
YP_003254259.1	PFAM: flagellin domain protein; KEGG: gka:GK3131 flagellin protein
YP_003254260.1	affects carbohydrate metabolism; has regulatory role in many processes
YP_003254261.1	binds to flagellin and appears to stabilize flagellin during flagella assembly
YP_003254262.1	KEGG: gka:GK3135 hypothetical protein
YP_003254263.1	with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook
YP_003254264.1	with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook
YP_003254265.1	PFAM: FlgN family protein; KEGG: gka:GK3138 hypothetical protein
YP_003254266.1	PFAM: anti-sigma-28 factor FlgM family protein; KEGG: gka:GK3139 anti-sigma factor repressor of sigma-D-dependent transcription (negative regulator of flagellin synthesis) (anti-sigma-D factor)
YP_003254267.1	KEGG: gka:GK3140 hypothetical protein
YP_003254268.1	PFAM: protein of unknown function DUF327; KEGG: gka:GK3141 hypothetical protein
YP_003254269.1	PFAM: flagellin domain protein; KEGG: gtn:GTNG_3067 flagellin
YP_003254270.1	TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS; KEGG: gka:GK3143 flagellar biosynthesis
YP_003254271.1	KEGG: gka:GK3144 flagellar biosynthesis
YP_003254272.1	KEGG: gka:GK3145 hypothetical protein
YP_003254273.1	KEGG: gka:GK3146 late competence protein
YP_003254274.1	PFAM: helicase; type III restriction protein res subunit; SMART: DEAD-like helicase ; helicase; KEGG: gka:GK3147 late competence protein
YP_003254275.1	TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: gka:GK3149 hypothetical protein
YP_003254276.1	PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: gka:GK3150 two-component response regulator (extracellular proteinase response regulator)
YP_003254277.1	KEGG: gka:GK3151 two-component sensor histidine kinase (degradative enzyme regulator / competence regulator); PFAM: Sensor DegS domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein
YP_003254278.1	PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: gka:GK3152 hypothetical protein
YP_003254279.1	TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: gka:GK3153 attenuator role for lytABC and LytR expression
YP_003254280.1	KEGG: gka:GK3154 hypothetical protein; PFAM: cell wall hydrolase/autolysin; SH3 type 3 domain protein; protein of unknown function DUF1058; SMART: cell wall hydrolase/autolysin; SH3 domain protein
YP_003254282.1	PFAM: SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: gka:GK3155 hypothetical protein
YP_003254283.1	TIGRFAM: SpoIID/LytB domain protein; PFAM: stage II sporulation D domain protein; KEGG: gka:GK3156 hypothetical protein
YP_003254284.1	PFAM: glycosyl transferase group 1; KEGG: gka:GK3157 hypothetical protein
YP_003254285.1	KEGG: gka:GK3158 hypothetical protein
YP_003254286.1	PFAM: glycosyl transferase group 1; KEGG: gka:GK3159 glycosyltransferase
YP_003254287.1	PFAM: glycosyl transferase group 1; KEGG: gka:GK3160 hypothetical protein
YP_003254288.1	KEGG: gka:GK3161 hypothetical protein
YP_003254289.1	KEGG: gka:GK3162 UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase
YP_003254290.1	PFAM: polysaccharide biosynthesis protein; multi antimicrobial extrusion protein MatE; KEGG: gka:GK3163 polysaccharide biosynthesis
YP_003254291.1	KEGG: gka:GK3164 acetyltransferase
YP_003254292.1	KEGG: gka:GK3165 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase ; 6-phosphogluconate dehydrogenase NAD-binding
YP_003254293.1	PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: gka:GK3166 hypothetical protein
YP_003254294.1	PFAM: lipopolysaccharide biosynthesis protein; KEGG: gka:GK3167 hypothetical protein
YP_003254295.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: gka:GK3168 pleiotropic regulatory protein
YP_003254296.1	PFAM: glycosyl transferase, family 4, conserved region; KEGG: gka:GK3169 teichoic acid linkage unit synthesis (undecaprenylpyrophosphate-N-aetylglucosamine)
YP_003254298.1	functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; in some organisms, especially gram positive pathogens, have paralogs that have been found to be nonessential but do function in secretion of a subset of exported proteins
YP_003254299.1	KEGG: gka:GK3171 hypothetical protein
YP_003254300.1	KEGG: gka:GK3172 carboxyl-terminal processing protease; TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; SMART: peptidase S41; PDZ/DHR/GLGF domain protein
YP_003254301.1	KEGG: gka:GK3173 hypothetical protein
YP_003254302.1	KEGG: gka:GK3174 hypothetical protein
YP_003254303.1	KEGG: gka:GK3175 hypothetical protein
YP_003254304.1	PFAM: SCP-like extracellular; KEGG: gka:GK3176 hypothetical protein
YP_003254305.1	KEGG: gka:GK3177 hypothetical protein
YP_003254306.1	PFAM: Domain of unknown function DUF1814; KEGG: gka:GK3178 hypothetical protein
YP_003254307.1	KEGG: gka:GK3179 hypothetical protein
YP_003254308.1	PFAM: alpha amylase catalytic region; Fibronectin type III domain protein; SMART: alpha amylase catalytic sub domain; Fibronectin type III domain protein; alpha amylase all-beta; KEGG: gka:GK3180 amylopullulanase
YP_003254309.1	converts 1,4-alpha-D-glucans to maltodextrin
YP_003254310.1	PFAM: 5'-nucleotidase domain protein; metallophosphoesterase; KEGG: gka:GK3182 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase bifunctional periplasmic precursor protein
YP_003254311.1	PFAM: transposase IS4 family protein; KEGG: gwc:GWCH70_1919 transposase IS4 family protein
YP_003254312.1	KEGG: afl:Aflv_1600 hypothetical protein
YP_003254313.1	KEGG: cpi:Cpin_3469 hypothetical protein
YP_003254315.1	PFAM: transposase IS4 family protein; KEGG: afl:Aflv_2105 transposase
YP_003254316.1	KEGG: pmu:PM1101 hypothetical protein
YP_003254317.1	KEGG: gwc:GWCH70_3087 hypothetical protein
YP_003254318.1	KEGG: gka:GK3186 surface layer (S-layer) glycoprotein
YP_003254319.1	PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: gwc:GWCH70_0167 transposase IS204/IS1001/IS1096/IS1165 family protein
YP_003254320.1	KEGG: gka:GK3187 hypothetical protein
YP_003254321.1	PFAM: NLP/P60 protein; peptidoglycan-binding domain 1 protein; KEGG: gka:GK3188 cell wall lytic activity
YP_003254322.1	KEGG: gka:GK3189 hypothetical protein
YP_003254323.1	PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: gka:GK3190 transcriptional regulator
YP_003254324.1	TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: gka:GK3191 single-strand DNA-binding protein
YP_003254325.1	KEGG: gka:GK3192 hypothetical protein
YP_003254326.1	TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B; KEGG: gka:GK3193 hypothetical protein
YP_003254327.1	TIGRFAM: LPXTG-motif cell wall anchor domain protein; KEGG: gka:GK3194 hypothetical protein
YP_003254328.1	catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; lysine and threonine sensitive
YP_003254329.1	PFAM: protein of unknown function DUF1284; KEGG: gka:GK3196 iron-sulfur binding protein
YP_003254330.1	KEGG: gka:GK3197 hypothetical protein
YP_003254331.1	PFAM: aldehyde dehydrogenase; KEGG: gka:GK3198 NAD-dependent aldehyde dehydrogenase
YP_003254332.1	PFAM: protein of unknown function DUF779; KEGG: gka:GK3199 hypothetical protein
YP_003254333.1	TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: gka:GK3201 multidrug-efflux transporter
YP_003254334.1	PFAM: regulatory protein TetR; KEGG: gka:GK3202 TetR/AcrR family transcriptional regulator
YP_003254335.1	KEGG: gka:GK3203 hypothetical protein
YP_003254336.1	PFAM: ROK family protein; KEGG: gka:GK3204 fructokinase
YP_003254337.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gka:GK3205 ABC transporter (permease)
YP_003254338.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gka:GK3206 ABC transporter (permease)
YP_003254339.1	PFAM: extracellular solute-binding protein family 1; KEGG: gka:GK3207 ABC transporter (substrate-binding protein)
YP_003254340.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; KEGG: gka:GK3208 two-component response regulator
YP_003254341.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; KEGG: gka:GK3209 two-component sensor histidine kinase
YP_003254342.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: gka:GK3210 sugar ABC transporter (sugar-binding protein)
YP_003254344.1	PFAM: glycoside hydrolase family 4; KEGG: gka:GK3212 6-phospho-beta-glucosidase
YP_003254345.1	PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: gka:GK3213 transcriptional regulator
YP_003254347.1	PFAM: ABC transporter; SMC domain protein; protein of unknown function DUF214; SMART: ATPase AAA; KEGG: ppe:PEPE_1650 peptide ABC transporter ATPase
YP_003254349.1	PFAM: FAD linked oxidase; KEGG: gka:GK3215 D-lactate dehydrogenase
YP_003254350.1	PFAM: transketolase; transketolase domain protein; KEGG: gka:GK3216 pyruvate dehydrogenase E1 (lipoamide) subunit beta
YP_003254351.1	KEGG: gka:GK3217 pyruvate dehydrogenase E1 (lipoamide) subunit alpha; TIGRFAM: pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha; PFAM: dehydrogenase E1 component
YP_003254352.1	PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; KEGG: gka:GK3218 pyruvate dehydrogenase E2 (dihydrolipoamide acetyltransferase)
YP_003254353.1	PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gka:GK3219 hypothetical protein
YP_003254354.1	PFAM: oxidoreductase domain protein; KEGG: gka:GK3220 hypothetical protein
YP_003254355.1	KEGG: gka:GK3221 hypothetical protein
YP_003254356.1	catalyzes the reduction of arsenate to arsenite; also can dephosphorylate tyrosine phosphorylated proteins, aryl phosphates, and acyl phosphates
YP_003254357.1	TIGRFAM: arsenic resistance protein; PFAM: Bile acid:sodium symporter; KEGG: gka:GK3223 arsenic oxyanion-translocation pump
YP_003254358.1	PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: gka:GK3224 ArsR family transcriptional regulator
YP_003254359.1	PFAM: protein of unknown function DUF1360; KEGG: gtn:GTNG_3146 YngL
YP_003254360.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: gka:GK3226 ribose ABC transporter (ribose-binding protein)
YP_003254361.1	PFAM: inner-membrane translocator; KEGG: gka:GK3227 ribose ABC transporter (permease)
YP_003254362.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK3228 ribose ABC transporter ATP-binding protein
YP_003254363.1	cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose; RbsD is required for efficient ribose utilization in E. coli; rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source
YP_003254364.1	TIGRFAM: ribokinase; PFAM: PfkB domain protein; KEGG: gka:GK3230 ribokinase
YP_003254365.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: gka:GK3231 transcriptional repressor of the ribose operon
YP_003254367.1	KEGG: gka:GK3232 hypothetical protein
YP_003254368.1	PFAM: VanZ family protein; KEGG: gka:GK3233 hypothetical protein
YP_003254369.1	KEGG: gka:GK3234 hypothetical protein
YP_003254370.1	PFAM: Na+/solute symporter; KEGG: gtn:GTNG_3183 sodium/proline symporter
YP_003254371.1	KEGG: gka:GK3241 hypothetical protein
YP_003254372.1	KEGG: gka:GK3251 N-acyl-L-amino acid amidohydrolase (L-aminoacylase); TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein
YP_003254373.1	allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide
YP_003254374.1	KEGG: gka:GK3253 hypothetical protein
YP_003254375.1	TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; KEGG: gka:GK1646 transposase
YP_003254376.1	KEGG: gka:GK3254 NDP-suger dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase ; FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_003254377.1	KEGG: gka:GK3255 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; SH3 type 3 domain protein; protein of unknown function DUF1058; SH3 domain protein; SMART: cell wall hydrolase/autolysin; SH3 domain protein
YP_003254378.1	PFAM: SEC-C motif domain protein; KEGG: gwc:GWCH70_3211 sec-C motif domain protein
YP_003254379.1	PFAM: plasmid pRiA4b ORF-3 family protein; KEGG: gka:GK3257 hypothetical protein
YP_003254380.1	PFAM: SEC-C motif domain protein; KEGG: gwc:GWCH70_3210 sec-C motif domain protein
YP_003254381.1	PFAM: transposase IS4 family protein; KEGG: gwc:GWCH70_3382 transposase IS4 family protein
YP_003254382.1	PFAM: SEC-C motif domain protein; KEGG: gka:GK3259 hypothetical protein
YP_003254383.1	PFAM: SEC-C motif domain protein; KEGG: gka:GK3260 hypothetical protein
YP_003254384.1	PFAM: zinc finger SWIM domain protein; KEGG: gka:GK3261 hypothetical protein
YP_003254385.1	PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicase ; helicase; KEGG: gwc:GWCH70_3216 non-specific serine/threonine protein kinase
YP_003254386.1	KEGG: gka:GK3263 hypothetical protein
YP_003254387.1	PFAM: protein of unknown function DUF1861; KEGG: gka:GK3264 hypothetical protein
YP_003254388.1	PFAM: Appr-1-p processing domain protein; SMART: Appr-1-p processing domain protein; KEGG: gka:GK3265 hypothetical protein
YP_003254389.1	PFAM: protein of unknown function DUF488; KEGG: gka:GK3266 hypothetical protein
YP_003254390.1	KEGG: gka:GK3267 hypothetical protein
YP_003254391.1	KEGG: gka:GK3268 hypothetical protein
YP_003254392.1	TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: nucleotidyl transferase; KEGG: gka:GK3269 UTP-glucose-1-phosphate uridylyltransferase (uridine diphosphoglucose pyrophosphorylase) (general stress protein 33)
YP_003254393.1	PFAM: glycosidase PH1107-related; KEGG: gka:GK3270 hypothetical protein
YP_003254394.1	PFAM: protein of unknown function DUF1861; KEGG: gka:GK3271 hypothetical protein
YP_003254395.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gka:GK3272 sugar ABC transporter (permease)
YP_003254396.1	PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gka:GK3273 sugar ABC transporter (permease)
YP_003254397.1	PFAM: extracellular solute-binding protein family 1; KEGG: gka:GK3274 sugar ABC transporter (sugar-binding protein)
YP_003254398.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: gka:GK3275 LacI family transcription regulator
YP_003254399.1	KEGG: gka:GK3276 hypothetical protein
YP_003254400.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: gka:GK3277 hypothetical protein
YP_003254401.1	KEGG: gwc:GWCH70_3220 hypothetical protein
YP_003254402.1	KEGG: gwc:GWCH70_3221 hypothetical protein
YP_003254403.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; peptidoglycan-binding lysin domain; SMART: peptidoglycan-binding LysM; KEGG: gka:GK3280 hypothetical protein
YP_003254404.1	KEGG: gwc:GWCH70_3223 hypothetical protein
YP_003254405.1	KEGG: gwc:GWCH70_3203 regulatory protein MerR
YP_003254406.1	KEGG: gwc:GWCH70_3204 hypothetical protein
YP_003254407.1	KEGG: drm:Dred_1823 hypothetical protein
YP_003254408.1	PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; regulatory protein GntR HTH; SMART: regulatory protein DeoR; KEGG: bcl:ABC0658 transcriptional regulator of sugar metabolism
YP_003254409.1	KEGG: bha:BH0802 hypothetical protein
YP_003254410.1	PFAM: transposase IS4 family protein; KEGG: afl:Aflv_2105 transposase
YP_003254411.1	TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: nucleotidyl transferase; KEGG: gtn:GTNG_3264 UDP-glucose pyrophosphorylase
YP_003254412.1	KEGG: gka:GK3321 hypothetical protein
YP_003254414.1	KEGG: gka:GK3322 hypothetical protein
YP_003254415.1	PFAM: PHP domain protein; KEGG: gka:GK3323 capsular polysaccharide biosynthesis protein
YP_003254416.1	attenuator function for control of operon expression
YP_003254417.1	KEGG: gka:GK3325 hypothetical protein
YP_003254418.1	PFAM: lipopolysaccharide biosynthesis protein; KEGG: gka:GK3327 capsular polysaccharide biosynthesis protein
YP_003254419.1	KEGG: gka:GK3328 hypothetical protein
YP_003254420.1	in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP
YP_003254421.1	KEGG: gka:GK3330 hypothetical protein
YP_003254422.1	TIGRFAM: fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: gka:GK3331 flagellar hook-basal body protein
YP_003254423.1	TIGRFAM: fagellar hook-basal body protein; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: gka:GK3332 flagellar basal-body rod protein
YP_003254424.1	TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; cell division protein FtsA; KEGG: gka:GK3333 rod shape-determining protein Mbl
YP_003254425.1	TIGRFAM: sporulation transcriptional regulator SpoIIID; KEGG: gka:GK3334 transcriptional regulator of sigma-E/sigma-K-dependent gene (stage III sporulation protein D)
YP_003254426.1	KEGG: gka:GK3335 intracellular proteinase inhibitor (BsuPI)
YP_003254427.1	PFAM: gamma-glutamyltranspeptidase; KEGG: gka:GK3338 gamma-glutamyltranspeptidase
YP_003254428.1	PFAM: peptidase M23; KEGG: gka:GK3339 stage II sporulation protein Q
YP_003254429.1	TIGRFAM: stage II sporulation protein D; SpoIID/LytB domain protein; PFAM: stage II sporulation D domain protein; KEGG: gka:GK3340 stage II sporulation protein D
YP_003254430.1	adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active
YP_003254431.1	PFAM: protein of unknown function DUF1779; KEGG: gka:GK3342 hypothetical protein
YP_003254432.1	TIGRFAM: conserved hypothetical protein; PFAM: conserved hypothetical protein; KEGG: gka:GK3343 hypothetical protein
YP_003254433.1	Catalyzes the transfer of electrons from NADH to quinone
YP_003254434.1	Catalyzes the transfer of electrons from NADH to quinone
YP_003254435.1	Catalyzes the transfer of electrons from NADH to ubiquinone
YP_003254436.1	Catalyzes the transfer of electrons from NADH to quinone
YP_003254437.1	Catalyzes the transfer of electrons from NADH to quinone
YP_003254438.1	Catalyzes the transfer of electrons from NADH to quinone
YP_003254439.1	Catalyzes the transfer of electrons from NADH to quinone
YP_003254440.1	catalyzes the transfer of electrons from NADH to ubiquinone
YP_003254441.1	Catalyzes the transfer of electrons from NADH to ubiquinone
YP_003254442.1	The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen
YP_003254443.1	Catalyzes the transfer of electrons from NADH to ubiquinone
YP_003254444.1	part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane
YP_003254445.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit
YP_003254446.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit
YP_003254447.1	produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit
YP_003254448.1	Produces ATP from ADP in the presence of a proton gradient across the membrane; the subunit delta is part of the catalytic core of the ATP synthase complex
YP_003254449.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.
YP_003254450.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0
YP_003254451.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0
YP_003254452.1	PFAM: ATP synthase I; KEGG: gka:GK3365 F0F1-type ATP synthase I subunit
YP_003254453.1	KEGG: gka:GK3366 hypothetical protein
YP_003254454.1	Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate
YP_003254455.1	catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate
YP_003254456.1	PFAM: conserved hypothetical protein; KEGG: gka:GK3370 hypothetical protein
YP_003254457.1	catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity
YP_003254458.1	PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: gka:GK3372 methyl-accepting chemotaxis protein
YP_003254459.1	PFAM: protein-tyrosine phosphatase, low molecular weight; SMART: protein-tyrosine phosphatase, low molecular weight; KEGG: gka:GK3373 protein-tyrosine phosphatase
YP_003254461.1	PFAM: protein of unknown function DUF204; KEGG: gka:GK3374 hypothetical protein
YP_003254462.1	TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; SUA5 domain protein; KEGG: gka:GK3375 hypothetical protein
YP_003254463.1	TIGRFAM: stage II sporulation protein R; PFAM: sporulation stage II protein R; KEGG: gka:GK3376 stage II sporulation protein R (pro-sigma-E processing factor)
YP_003254464.1	TIGRFAM: protein-(glutamine-N5) methyltransferase, release factor-specific; modification methylase, HemK family; PFAM: methyltransferase small; KEGG: gka:GK3377 protoporphyrinogen oxidase
YP_003254465.1	recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2
YP_003254466.1	KEGG: gka:GK3379 hypothetical protein
YP_003254467.1	catalyzes the formation of thymidine 5'-phosphate from thymidine
YP_003254468.1	RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome
YP_003254469.1	An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes
YP_003254470.1	type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese
YP_003254471.1	adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active
YP_003254472.1	similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity
YP_003254473.1	catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate
YP_003254474.1	PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: gka:GK3387 stage 0 sporulation protein F (two-component response regulator, sporulation initiation phosphotransferase F)
YP_003254475.1	PFAM: protein of unknown function DUF2529; KEGG: gka:GK3388 hypothetical protein
YP_003254476.1	CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer
YP_003254477.1	PFAM: DNA-directed RNA polymerase subunit delta; KEGG: gka:GK3390 DNA-directed RNA polymerase subunit delta
YP_003254478.1	KEGG: gka:GK3391 hypothetical protein; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein; ArgK protein
YP_003254479.1	PFAM: regulatory protein TetR; KEGG: gka:GK3392 TetR/AcrR family transcriptional regulator
YP_003254480.1	PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: gka:GK3393 acyl-CoA dehydrogenase
YP_003254481.1	PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: gka:GK3394 acyl-CoA dehydrogenase
YP_003254482.1	converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA
YP_003254483.1	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation
YP_003254484.1	PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: gka:GK3398 iron-sulfur oxidoreductase
YP_003254485.1	PFAM: phospholipase D/transphosphatidylase; SMART: phospholipase D/transphosphatidylase; KEGG: gka:GK3399 cardiolipin synthetase
YP_003254486.1	TIGRFAM: XapX domain protein; KEGG: gka:GK3400 hypothetical protein
YP_003254487.1	catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase
YP_003254488.1	PFAM: Domain of unknown function DUF1934; KEGG: gka:GK3402 hypothetical protein
YP_003254489.1	KEGG: gka:GK3403 hypothetical protein
YP_003254490.1	TIGRFAM: agmatinase; PFAM: arginase/agmatinase/formiminoglutamase; KEGG: gka:GK3404 agmatinase
YP_003254491.1	catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine
YP_003254492.1	TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: gka:GK3406 penicillin-binding protein
YP_003254493.1	PFAM: protein of unknown function YwhD; KEGG: gka:GK3407 hypothetical protein
YP_003254494.1	PFAM: peptidase M50; KEGG: gka:GK3408 metal-dependent protease
YP_003254495.1	TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase; KEGG: gka:GK3409 4-oxalocrotonate tautomerase
YP_003254496.1	PFAM: xanthine/uracil/vitamin C permease; Benzoate membrane transporter; KEGG: gtn:GTNG_3355 guanine-hypoxanthine permease-like protein
YP_003254497.1	KEGG: gka:GK3410 hypothetical protein
YP_003254498.1	PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: gka:GK3411 hypothetical protein
YP_003254499.1	KEGG: gka:GK3412 hypothetical protein
YP_003254500.1	TIGRFAM: transcription factor, RsfA family; KEGG: gka:GK3413 hypothetical protein
YP_003254501.1	PFAM: biotin/lipoate A/B protein ligase; KEGG: gka:GK3414 hypothetical protein
YP_003254502.1	in Salmonella this enzyme is required for ethanolamine catabolism; has higher affinity for CoA than Pta
YP_003254503.1	PFAM: chlorite dismutase; KEGG: gka:GK3416  heme peroxidase
YP_003254504.1	KEGG: gka:GK2116 hypothetical protein
YP_003254505.1	PFAM: cell wall hydrolase SleB; KEGG: gka:GK3417 cell wall hydrolase (sporulation)
YP_003254506.1	TIGRFAM: spore coat protein GerQ; PFAM: Spore coat protein GerQ; KEGG: gka:GK3418 hypothetical protein
YP_003254507.1	PFAM: protein of unknown function DUF423; KEGG: gka:GK3419 hypothetical protein
YP_003254508.1	KEGG: lsp:Bsph_2401 hypothetical protein
YP_003254509.1	KEGG: gka:GK0888 transposase
YP_003254510.1	PFAM: CAT RNA-binding domain protein; PRD domain protein; KEGG: bpu:BPUM_3567 transcription antiterminator
YP_003254511.1	PFAM: glycoside hydrolase family 1; KEGG: bld:BLi04199 hypothetical protein
YP_003254512.1	TIGRFAM: PTS system, beta-glucoside-specific IIABC subunit; PTS system, glucose subfamily, IIsubunit alpha; PTS system, glucose-like IIB subunint; PFAM: sugar-specific permease EIIA 1 domain; phosphotransferase system EIIC; phosphotransferase system EIIB/cysteine, phosphorylation site; KEGG: bha:BH0595 PTS system, beta-glucoside-specific enzyme II, ABC component
YP_003254513.1	KEGG: gka:GK3420 hypothetical protein
YP_003254514.1	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
YP_003254515.1	PFAM: protein of unknown function DUF1232; KEGG: cyn:Cyan7425_4882 protein of unknown function DUF1232
YP_003254516.1	TIGRFAM: anti-anti-sigma factor; PFAM: sulfate transporter/antisigma-factor antagonist STAS; KEGG: gka:GK3422 stage II sporulation protein AA (anti-anti-sigma factor,antagonist of SpoIIAB)
YP_003254517.1	binds to sigma-B preventing the formation of an RNA polymerase holoenzyme
YP_003254518.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; Sigma-70 region 4 type 2; KEGG: gka:GK3424 DNA-directed RNA polymerase sigma-37 factor (sigma-B)
YP_003254519.1	KEGG: gka:GK3425 hypothetical protein; TIGRFAM: PAS sensor protein; PFAM: stage II sporulation E family protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: protein phosphatase 2C domain protein; PAS domain containing protein
YP_003254520.1	PFAM: PemK family protein; KEGG: gka:GK3426 hypothetical protein
YP_003254522.1	FMN-dependent; requires NADH; catalyzes the cleavage of azo bond in aromatic azo compounds
YP_003254523.1	KEGG: gka:GK3429 hypothetical protein
YP_003254524.1	Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_003254525.1	PFAM: glycosyl transferase family 2; KEGG: gka:GK3432 glycosyltransferase involved in cell wall biogenesis
YP_003254527.1	PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: gka:GK3433 metabolite transporter
YP_003254528.1	PFAM: protein of unknown function UPF0236; KEGG: gka:GK1016 hypothetical protein
YP_003254529.1	KEGG: gka:GK3434 hypothetical protein
YP_003254530.1	KEGG: gka:GK3435 hypothetical protein
YP_003254531.1	TIGRFAM: phosphate binding protein; KEGG: gka:GK3436 phosphate ABC transporter (substrate-binding protein)
YP_003254532.1	TIGRFAM: phosphate ABC transporter inner membrane subunit PstC; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gka:GK3437 phosphate ABC transporter (permease)
YP_003254533.1	TIGRFAM: phosphate ABC transporter inner membrane subunit PstA; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gka:GK3438 phosphate ABC transporter (permease)
YP_003254534.1	KEGG: gka:GK3443 sucrose-6-phosphate hydrolase (sucrase); TIGRFAM: sucrose-6-phosphate hydrolase; PFAM: glycosyl hydrolase family 32 domain protein; SMART: glycoside hydrolase family 32
YP_003254535.1	TIGRFAM: PTS system, sucrose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PTS system, maltose and glucose-specific subfamily, IIC subunit; PFAM: phosphotransferase system EIIC; phosphotransferase system EIIB/cysteine, phosphorylation site; KEGG: gka:GK3444 PTS system, sucrose-specific enzyme II, BC component
YP_003254536.1	PFAM: CAT RNA-binding domain protein; PRD domain protein; KEGG: gka:GK3445 transcription antiterminator
YP_003254537.1	TIGRFAM: PTS system, glucose subfamily, IIsubunit alpha; PFAM: sugar-specific permease EIIA 1 domain; KEGG: gka:GK3446 PTS system, glucose-specific enzyme II, A component
YP_003254538.1	KEGG: gka:GK3447 hypothetical protein
YP_003254539.1	KEGG: gka:GK3448 stage V sporulation protein N (L-alanine dehydrogenase; TIGRFAM: alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein; shikimate/quinate 5-dehydrogenase
YP_003254540.1	PFAM: protein of unknown function DUF820; KEGG: gka:GK3449 hypothetical protein
YP_003254541.1	catalyzes the phosphorylation of three vitamin B6 precursors, pyridoxal, pyridoxine and pyridoxamine
YP_003254542.1	PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: gka:GK3451 hypothetical protein
YP_003254543.1	TIGRFAM: sodium/proline symporter; SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: gka:GK3452 sodium:proline symporter (osmoregulation)
YP_003254544.1	PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; KEGG: gka:GK3453 amino acid ABC transporter (substrate-binding protein)
YP_003254545.1	TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gka:GK3454 amino acid ABC transporter (permease)
YP_003254546.1	PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK3455 amino acid ABC transporter ATP-binding protein
YP_003254547.1	TIGRFAM: cytochrome aa3 quinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV; KEGG: gtn:GTNG_3388 cytochrome aa3 quinol oxidase polypeptide IV
YP_003254548.1	TIGRFAM: cytochrome aa3 quinol oxidase subunit III; PFAM: cytochrome C oxidase subunit III; KEGG: gka:GK3457 cytochrome aa3 quinol oxidase subunit III
YP_003254549.1	KEGG: gka:GK3458 cytochrome aa3 quinol oxidase subunit I; TIGRFAM: cytochrome aa3 quinol oxidase subunit I; cytochrome C oxidase subunit I; PFAM: cytochrome C oxidase subunit I
YP_003254550.1	TIGRFAM: quinol oxidase AA3, subunit II; PFAM: cytochrome c oxidase subunit II; KEGG: gka:GK3459 cytochrome aa3 quinol oxidase subunit II
YP_003254551.1	PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: gka:GK3460 rRNA methylase
YP_003254552.1	PFAM: amino acid permease-associated region; KEGG: gka:GK3461 amino acid transporter
YP_003254553.1	KEGG: gka:GK3462 hypothetical protein
YP_003254554.1	PFAM: FAD dependent oxidoreductase; Rieske [2Fe-2S] iron-sulphur domain; KEGG: gka:GK3463 Rieske [2Fe-2S] iron-sulfur protein
YP_003254555.1	KEGG: gka:GK3464 mannose-6-phosphate isomerase; TIGRFAM: mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase type I
YP_003254556.1	KEGG: gka:GK3465 glycerate kinase; TIGRFAM: glycerate kinase; PFAM: glycerate kinase
YP_003254557.1	KEGG: gka:GK3466 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein
YP_003254558.1	SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA
YP_003254559.1	KEGG: gka:GK3468 hypothetical protein
YP_003254560.1	KEGG: gka:GK3469 serine protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein
YP_003254561.1	PFAM: beta-lactamase; KEGG: gka:GK3470 hypothetical protein
YP_003254562.1	PFAM: protein of unknown function YycH; KEGG: gka:GK3471 hypothetical protein
YP_003254563.1	PFAM: YycH family protein; KEGG: gka:GK3472 hypothetical protein
YP_003254564.1	KEGG: gka:GK3473 two-component sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; hypothetical protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; histidine kinase HAMP region domain protein
YP_003254565.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: gka:GK3474 two-component response regulator
YP_003254566.1	catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis
YP_003254567.1	unwinds double stranded DNA
YP_003254568.1	in Escherichia coli this protein is wrapped around the base of the L1 stalk
YP_003254569.1	PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; SMART: GGDEF domain containing protein; KEGG: gka:GK3478 hypothetical protein
YP_003254570.1	PFAM: protein of unknown function DUF2232, membrane; KEGG: gka:GK3479 hypothetical protein
YP_003254571.1	binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit
YP_003254572.1	TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: gka:GK3481 single-strand DNA-binding protein
YP_003254573.1	binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21
YP_003254574.1	translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1
YP_003254575.1	PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: gka:GK3484 hypothetical protein
YP_003254576.1	PFAM: protein of unknown function DUF951; KEGG: gka:GK3485 hypothetical protein
YP_003254577.1	PFAM: MscS Mechanosensitive ion channel; KEGG: gka:GK3486 hypothetical protein
YP_003254578.1	TIGRFAM: sporulation protein YyaC; PFAM: protein of unknown function DUF1256; KEGG: gka:GK3487 hypothetical protein
YP_003254579.1	KEGG: gka:GK3489 stage 0 sporulation protein J (antagonist of Soj); TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease
YP_003254580.1	PFAM: cobyrinic acid ac-diamide synthase; KEGG: gka:GK3490 sporulation initiation inhibitor protein
YP_003254581.1	KEGG: gka:GK3491 hypothetical protein; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease
YP_003254582.1	glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA
YP_003254583.1	GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs
YP_003254584.1	in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE
YP_003254586.1	PFAM: single-stranded nucleic acid binding R3H domain protein; SMART: single-stranded nucleic acid binding R3H domain protein; KEGG: gka:GK3495 SpoIIIJ-associated protein
YP_003254587.1	involved in biogenesis of membrane proteins; Firmicutes specific proteins are shorter than other bacterial counterparts and have a signal peptide and lipid attachment site; necessary for sporulation
YP_003254588.1	protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates
YP_003254589.1	in Escherichia coli transcription of this gene is enhanced by polyamines
YP_003254590.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bcl:ABC0545 hypothetical protein
YP_003254591.1	PFAM: pyruvate carboxyltransferase; KEGG: bcl:ABC0547 hydroxymethylglutaryl-CoA lyase
YP_003254592.1	PFAM: transposase IS4; KEGG: afl:Aflv_2105 transposase
YP_003254593.1	dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate
YP_003254594.1	TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein; KEGG: pjd:Pjdr2_2474 3-isopropylmalate dehydratase, small subunit
YP_003254595.1	PFAM: transposase IS4; KEGG: gka:GK0888 transposase
YP_003254596.1	PFAM: cobyrinic acid ac-diamide synthase; KEGG: gka:GKP36 chromosome partitioning protein
YP_003254597.1	KEGG: gka:GKP35 hypothetical protein
YP_003254598.1	KEGG: bcy:Bcer98_0752 DNA-cytosine methyltransferase; TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase
YP_003254599.1	PFAM: Restriction endonuclease, type II, AlwI; KEGG: bcy:Bcer98_0753 hypothetical protein
YP_003254601.1	TIGRFAM: DNA mismatch endonuclease Vsr; PFAM: DNA mismatch endonuclease vsr; KEGG: oih:OB3341 very-short-patch-repair endonuclease
YP_003254602.1	KEGG: gka:GKP04 replication protein
YP_003254603.1	KEGG: gwc:GWCH70_3467 hypothetical protein
YP_003254604.1	PFAM: beta-lactamase; KEGG: gka:GKP05 late competence protein
YP_003254605.1	KEGG: gka:GKP06 hypothetical protein
YP_003254607.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; PAS fold domain protein; SMART: AAA ATPase; PAS domain containing protein; KEGG: bha:BH1879 transcriptional regulator (sigma-L-dependent)
YP_003254608.1	PFAM: protein of unknown function DUF917; KEGG: tex:Teth514_1964 hypothetical protein
YP_003254609.1	PFAM: hydantoinase/oxoprolinase domain protein; hydantoinase/oxoprolinase; KEGG: cdf:CD1718  hydantoinase
YP_003254610.1	PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: drm:Dred_1545 permease for cytosine/purines, uracil, thiamine, allantoin
YP_003254611.1	PFAM: protein of unknown function DUF917; KEGG: bha:BH1883 hypothetical protein
YP_003254612.1	PFAM: hydantoinase/oxoprolinase; hydantoinase/oxoprolinase domain protein; KEGG: bha:BH1884 hydantoinase
YP_003254613.1	PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: afl:Aflv_2439 site-specific recombinase XerC
YP_003254614.1	PFAM: initiator RepB protein; KEGG: gka:GKP02 replication initiator protein
YP_003254615.1	KEGG: gka:GKP03 hypothetical protein
YP_003254616.1	PFAM: integrase family protein; KEGG: gka:GKP42 phage integrase
YP_003254617.1	PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: gka:GKP41 hypothetical protein
YP_003254618.1	KEGG: gwc:GWCH70_3455 hypothetical protein
YP_003254619.1	KEGG: gwc:GWCH70_3456 hypothetical protein
YP_003254620.1	KEGG: gwc:GWCH70_3457 hypothetical protein
YP_003254621.1	KEGG: gka:GKP38 hypothetical protein
YP_003254622.1	PFAM: transposase IS4; KEGG: gka:GK2942 hypothetical protein
YP_003254623.1	PFAM: CopG domain protein DNA-binding domain protein; KEGG: gka:GKP37 hypothetical protein
YP_003254624.1	KEGG: rme:Rmet_1588  PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; Propionate catabolism activator domain protein; PAS fold domain protein; SMART: ATPase AAA; PAS domain containing protein
YP_003254625.1	PFAM: transposase IS4; KEGG: gwc:GWCH70_3382 transposase IS4
YP_003254626.1	PFAM: isochorismatase hydrolase; KEGG: rxy:Rxyl_2747 N-carbamoylsarcosine amidase
YP_003254627.1	PFAM: hydantoinase/oxoprolinase; hydantoinase/oxoprolinase domain protein; KEGG: chl:Chy400_2437 5-oxoprolinase (ATP-hydrolyzing)
YP_003254628.1	PFAM: hydantoinase B/oxoprolinase; KEGG: chl:Chy400_2436 5-oxoprolinase (ATP-hydrolyzing)