-- dump date 20140619_102058 -- class Genbank::CDS -- table cds_note -- id note YP_002535480.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself. YP_002535481.1 KEGG: gur:Gura_0002 DNA polymerase III, beta subunit; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain YP_002535482.1 TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; KEGG: gur:Gura_0003 DNA replication and repair protein RecF YP_002535483.1 KEGG: gur:Gura_0004 DNA gyrase, B subunit; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase subunit B domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA topoisomerase type IIA subunit B region 2 domain protein; SMART: DNA topoisomerase II YP_002535484.1 KEGG: gur:Gura_0005 DNA gyrase, A subunit; TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller YP_002535485.1 KEGG: gur:Gura_0006 hypothetical protein YP_002535486.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate YP_002535487.1 KEGG: gur:Gura_0008 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002535488.1 KEGG: gur:Gura_0009 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002535489.1 KEGG: gur:Gura_0010 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002535490.1 KEGG: gur:Gura_0012 daunorubicin resistance ABC transporter ATPase subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter; SMART: ATPase AAA YP_002535491.1 PFAM: ABC transporter; KEGG: gur:Gura_0013 ABC transporter YP_002535492.1 PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: gur:Gura_0014 radical SAM domain-containing protein YP_002535493.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III YP_002535495.1 KEGG: gur:Gura_0019 membrane protein-like protein YP_002535496.1 KEGG: gbm:Gbem_3901 nitric oxide reductase YP_002535497.1 KEGG: gur:Gura_0021 hypothetical protein YP_002535498.1 becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers YP_002535499.1 KEGG: gur:Gura_0023 hypothetical protein YP_002535500.1 PFAM: peptidase U32; KEGG: gur:Gura_0024 peptidase U32 YP_002535501.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gsu:GSU3138 sensor histidine kinase/response regulator YP_002535502.1 KEGG: gur:Gura_0026 hypothetical protein YP_002535503.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate YP_002535504.1 KEGG: gur:Gura_0029 nucleic acid binding, OB-fold, tRNA/helicase-type YP_002535505.1 KEGG: gur:Gura_0030 membrane protein-like protein YP_002535506.1 PFAM: peptidase M16 domain protein; KEGG: gur:Gura_0031 peptidase M16 domain-containing protein YP_002535507.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: gur:Gura_0032 cobalamin (vitamin B12) biosynthesis CbiX protein YP_002535508.1 PFAM: Precorrin-8X methylmutase CbiC/CobH; KEGG: gur:Gura_0033 precorrin-8X methylmutase CbiC/CobH YP_002535509.1 TIGRFAM: cobalamin biosynthesis protein CbiD; PFAM: cobalamin (vitamin B12) biosynthesis CbiD protein; KEGG: gur:Gura_0034 cobalamin biosynthesis protein CbiD YP_002535510.1 KEGG: gur:Gura_0035 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_002535511.1 TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: gur:Gura_0036 precorrin-2 C20-methyltransferase YP_002535512.1 KEGG: gur:Gura_0039 precorrin-4 C11-methyltransferase; TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_002535513.1 PFAM: KilA domain protein; KEGG: gur:Gura_3302 hypothetical protein YP_002535514.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: gur:Gura_0040 cobalamin (vitamin B12) biosynthesis CbiG protein YP_002535515.1 KEGG: sfu:Sfum_2477 hypothetical protein YP_002535516.1 TIGRFAM: cobyric acid synthase CobQ; precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: gur:Gura_0041 cobyric acid synthase CobQ YP_002535517.1 TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; KEGG: gur:Gura_0042 cobalamin biosynthesis protein CobD YP_002535518.1 TIGRFAM: L-threonine-O-3-phosphate decarboxylase; PFAM: aminotransferase class I and II; KEGG: gur:Gura_0043 L-threonine-O-3-phosphate decarboxylase YP_002535519.1 PFAM: type IV pilus assembly PilZ; KEGG: gur:Gura_0044 type IV pilus assembly PilZ YP_002535520.1 PFAM: ferric-uptake regulator; KEGG: gur:Gura_0045 ferric uptake regulator family protein YP_002535521.1 PFAM: periplasmic solute binding protein; KEGG: gur:Gura_0046 periplasmic solute binding protein YP_002535522.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gur:Gura_0047 ABC transporter YP_002535523.1 PFAM: ABC transporter; KEGG: gur:Gura_0048 ABC transporter YP_002535524.1 PFAM: response regulator receiver; KEGG: gur:Gura_0049 response regulator receiver protein YP_002535525.1 KEGG: gur:Gura_0050 response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; PAS fold domain protein; SMART: PAS domain containing protein YP_002535526.1 KEGG: gur:Gura_0051 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002535527.1 KEGG: gur:Gura_0052 extracellular solute-binding protein YP_002535528.1 PFAM: ATP-binding region ATPase domain protein; KEGG: gur:Gura_0053 integral membrane sensor signal transduction histidine kinase YP_002535529.1 KEGG: gur:Gura_0054 response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002535530.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: gur:Gura_0055 CMP/dCMP deaminase, zinc-binding YP_002535531.1 TIGRFAM: cytochrome C family protein; PFAM: multihaem cytochrome; KEGG: gur:Gura_0120 cytochrome c family protein YP_002535532.1 KEGG: gur:Gura_0522 ResB protein required for cytochrome c biosynthesis-like protein YP_002535533.1 PFAM: KWG Leptospira repeat protein; KEGG: cbh:CLC_1691 hypothetical protein YP_002535534.1 PFAM: cytochrome c assembly protein; KEGG: mta:Moth_2200 cytochrome c assembly protein YP_002535535.1 KEGG: gme:Gmet_0578 hypothetical protein YP_002535536.1 PFAM: cobalamin B12-binding domain protein; radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: gur:Gura_0513 radical SAM domain-containing protein YP_002535537.1 PFAM: Spermine synthase; KEGG: gsu:GSU2502 spermine/spermidine synthase family protein YP_002535538.1 KEGG: chy:CHY_1047 hypothetical protein YP_002535539.1 PFAM: protein of unknown function DUF214; KEGG: aba:Acid345_1869 ABC efflux pump, inner membrane subunit YP_002535540.1 PFAM: protein of unknown function DUF214; KEGG: yen:YE2494 hypothetical protein YP_002535541.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: fnu:FN1352 ABC transporter ATP-binding protein YP_002535542.1 KEGG: ypb:YPTS_1991 YHS domain-containing protein YP_002535544.1 PFAM: cobalamin B12-binding domain protein; radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: gur:Gura_0516 radical SAM domain-containing protein YP_002535545.1 KEGG: ppd:Ppro_3370 hypothetical protein YP_002535546.1 PFAM: Dual specificity protein phosphatase; tyrosine phosphatase; KEGG: gme:Gmet_0085 protein tyrosine/serine phosphatase YP_002535547.1 KEGG: glo:Glov_3085 hypothetical protein YP_002535548.1 KEGG: glo:Glov_1094 hypothetical protein YP_002535550.1 TIGRFAM: cell wall/surface repeat protein; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: mhu:Mhun_0018 peptidase S8 and S53, subtilisin, kexin, sedolisin YP_002535551.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: glo:Glov_0277 filamentation induced by cAMP protein Fic YP_002535553.1 PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; major facilitator superfamily MFS_1; KEGG: ppd:Ppro_3365 2-acyl-glycerophospho-ethanolamine acyltransferase YP_002535554.1 PFAM: amidohydrolase; KEGG: gbm:Gbem_0303 amidohydrolase YP_002535555.1 PFAM: sigma-54 factor interaction domain-containing protein; SMART: ATPase AAA; KEGG: gbm:Gbem_0304 response regulator receiver protein YP_002535556.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC-type transcriptional regulator domain protein; KEGG: gur:Gura_4375 AraC-like transcriptional regulator YP_002535557.1 PFAM: aldo/keto reductase; KEGG: gbm:Gbem_0402 aldo/keto reductase YP_002535558.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: gsu:GSU3125 alcohol dehydrogenase, zinc-containing YP_002535559.1 PFAM: helix-turn-helix domain protein; KEGG: glo:Glov_2898 transcriptional regulator, XRE family YP_002535560.1 TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein; KEGG: gur:Gura_1477 HipA domain-containing protein YP_002535561.1 KEGG: gbm:Gbem_0313 Fe-S-cluster-containing hydrogenase components 2-like protein YP_002535562.1 PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: gbm:Gbem_0312 aldehyde ferredoxin oxidoreductase YP_002535563.1 KEGG: mxa:MXAN_3564 peptidase, M36 (fungalysin) family YP_002535564.1 KEGG:. YP_002535565.1 KEGG: gbm:Gbem_2063 NHL repeat containing protein YP_002535566.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: gur:Gura_3067 filamentation induced by cAMP protein Fic YP_002535568.1 KEGG: gbm:Gbem_3891 hypothetical protein YP_002535569.1 KEGG: gsu:GSU1209 hypothetical protein YP_002535570.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: gur:Gura_1601 electron transfer flavoprotein beta-subunit YP_002535571.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: gur:Gura_1602 electron transfer flavoprotein, alpha subunit YP_002535572.1 TIGRFAM: 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: gme:Gmet_2151 alcohol dehydrogenase YP_002535573.1 TIGRFAM: cyclohexa-1,5-dienecarbonyl-CoA hydratase; PFAM: Enoyl-CoA hydratase/isomerase; KEGG: gme:Gmet_2150 enoyl-CoA hydratase/isomerase YP_002535574.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gme:Gmet_2059 3-oxoacyl-[acyl-carrier-protein] reductase YP_002535575.1 KEGG: gme:Gmet_2058 thiolase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: thiolase YP_002535576.1 PFAM: amidohydrolase; KEGG: gme:Gmet_2147 amidohydrolase YP_002535577.1 TIGRFAM: molybdenum hydroxylase accessory protein, YgfJ family; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: gme:Gmet_2140 molybdenum cofactor biosynthesis protein YP_002535578.1 KEGG: gme:Gmet_2139 hypothetical protein YP_002535579.1 TIGRFAM: selenium-dependent molybdenum hydroxylase system protein, YqeB family; KEGG: gme:Gmet_2138 biotin/lipoyl attachment YP_002535580.1 PFAM: protein of unknown function DUF182; KEGG: gme:Gmet_2137 hypothetical protein YP_002535581.1 TIGRFAM: 4-hydroxybenzoyl-CoA reductase, alpha subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: gme:Gmet_2136 xanthine dehydrogenase, molybdenum binding subunit apoprotein YP_002535582.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: gme:Gmet_2135 ferredoxin:(2Fe-2S)-binding protein YP_002535583.1 PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: gme:Gmet_2134 molybdopterin dehydrogenase, FAD-binding:CO dehydrogenase flavoprotein-like YP_002535584.1 PFAM: regulatory protein MarR; Penicillinase repressor; KEGG: gme:Gmet_2133 MarR family transcriptional regulator YP_002535585.1 TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes YP_002535586.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: gur:Gura_1193 UBA/ThiF-type NAD/FAD binding protein YP_002535587.1 PFAM: thiamineS protein; KEGG: gur:Gura_1194 thiamineS protein YP_002535588.1 PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: gur:Gura_2421 aldehyde ferredoxin oxidoreductase YP_002535589.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gme:Gmet_2129 short-chain dehydrogenase/reductase SDR YP_002535591.1 catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate YP_002535592.1 KEGG: gme:Gmet_2127 phenol degradation-like protein YP_002535593.1 PFAM: FAD linked oxidase domain protein; KEGG: gme:Gmet_2126 FAD linked oxidase-like YP_002535594.1 PFAM: FAD linked oxidase domain protein; KEGG: gme:Gmet_2125 4-cresol dehydrogenase (hydroxylating) YP_002535595.1 KEGG: gme:Gmet_2124 twin-arginine translocation pathway signal YP_002535596.1 KEGG: gme:Gmet_2123 hypothetical protein YP_002535597.1 PFAM: cytochrome c class I; KEGG: gme:Gmet_2122 cytochrome c, class I YP_002535598.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: gme:Gmet_2121 twin-arginine translocation pathway signal YP_002535599.1 KEGG: gme:Gmet_2120 hypothetical protein YP_002535600.1 PFAM: Cytochrome b/b6 domain; KEGG: gme:Gmet_2119 cytochrome b/b6-like YP_002535601.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gme:Gmet_2118 FAD dependent oxidoreductase YP_002535602.1 PFAM: major facilitator superfamily MFS_1; KEGG: asu:Asuc_1584 major facilitator transporter YP_002535603.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; 4-vinyl reductase 4VR; Activator of aromatic catabolism; SMART: ATPase AAA; KEGG: gme:Gmet_2116 Fis family transcriptional regulator YP_002535604.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: gme:Gmet_2113 pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein YP_002535605.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: protein of unknown function DUF120; Haloacid dehalogenase domain protein hydrolase; KEGG: gme:Gmet_2112 HAD family hydrolase YP_002535606.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: gur:Gura_2159 ErfK/YbiS/YcfS/YnhG family protein YP_002535607.1 KEGG: gbm:Gbem_3989 lipoprotein YP_002535608.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; Sporulation domain protein; KEGG: gur:Gura_2161 ErfK/YbiS/YcfS/YnhG family protein YP_002535609.1 KEGG: gur:Gura_1221 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation E family protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; protein phosphatase 2C domain protein YP_002535610.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: gme:Gmet_2108 metal dependent phosphohydrolase YP_002535611.1 KEGG: gme:Gmet_2107 signal peptide protein YP_002535612.1 TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; KEGG: gme:Gmet_2105 3-octaprenyl-4hydroxybenzoate decarboxylase YP_002535613.1 PFAM: hypothetical protein; KEGG: gme:Gmet_2104 signal-transduction protein YP_002535614.1 PFAM: protein of unknown function UPF0261; KEGG: gme:Gmet_2103 hypothetical protein YP_002535615.1 TIGRFAM: UbiD family decarboxylase; phenylphosphate carboxylase, beta subunit; PFAM: Carboxylyase-related protein; KEGG: gme:Gmet_2102 carboxylyase-like protein YP_002535616.1 PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; KEGG: gme:Gmet_2101 pyruvate phosphate dikinase, PEP/pyruvate-binding YP_002535617.1 PFAM: PEP-utilising protein mobile region; KEGG: gme:Gmet_2100 hypothetical protein YP_002535618.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; 4-vinyl reductase 4VR; Activator of aromatic catabolism; SMART: ATPase AAA; KEGG: gme:Gmet_2099 Fis family transcriptional regulator YP_002535619.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gme:Gmet_2146 histidine kinase YP_002535620.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: gme:Gmet_2145 two component, sigma54 specific, Fis family transcriptional regulator YP_002535621.1 catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate YP_002535622.1 PFAM: phosphate acetyl/butaryl transferase; KEGG: gme:Gmet_2098 phosphate butyryltransferase YP_002535623.1 PFAM: hypothetical protein; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: PAS domain containing protein; ATPase AAA; KEGG: cbe:Cbei_3352 Fis family transcriptional regulator YP_002535624.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: pth:PTH_0579 anaerobic dehydrogenases YP_002535625.1 KEGG: gbm:Gbem_2264 formate dehydrogenase family accessory protein FdhD YP_002535626.1 PFAM: glycosyl hydrolase BNR repeat-containing protein YP_002535629.1 TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: gbm:Gbem_1424 SSS sodium solute transporter superfamily YP_002535630.1 PFAM: protein of unknown function DUF485; KEGG: gbm:Gbem_1423 protein of unknown function DUF485 YP_002535631.1 KEGG: gbm:Gbem_1422 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein YP_002535632.1 KEGG: gbm:Gbem_1421 hypothetical protein YP_002535633.1 PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: gbm:Gbem_1420 pyruvate ferredoxin/flavodoxin oxidoreductase YP_002535634.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; KEGG: gbm:Gbem_1419 indolepyruvate ferredoxin oxidoreductase, alpha subunit YP_002535635.1 KEGG: gsu:GSU1737 phenylacetate-CoA ligase YP_002535636.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: gbm:Gbem_1417 3-hydroxyacyl-CoA dehydrogenase NAD-binding YP_002535637.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: gbm:Gbem_1416 enoyl-CoA hydratase/isomerase YP_002535638.1 PFAM: thiolase; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: gbm:Gbem_1415 thiolase YP_002535639.1 PFAM: CoA-binding domain protein; KEGG: gbm:Gbem_1414 CoA-binding domain protein YP_002535640.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: gbm:Gbem_1413 2-hydroxyglutaryl-CoA dehydratase D-component YP_002535641.1 TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: gbm:Gbem_1412 CoA-substrate-specific enzyme activase YP_002535642.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; PAS fold-4 domain protein; SMART: ATPase AAA; KEGG: gbm:Gbem_1411 transcriptional regulator, NifA subfamily, fis family YP_002535643.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: gur:Gura_1593 acyl-CoA dehydrogenase domain-containing protein YP_002535644.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: gbm:Gbem_1417 3-hydroxyacyl-CoA dehydrogenase NAD-binding YP_002535645.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: gbm:Gbem_1416 enoyl-CoA hydratase/isomerase YP_002535646.1 PFAM: thiolase; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: gbm:Gbem_1415 thiolase YP_002535647.1 TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: gbm:Gbem_1424 SSS sodium solute transporter superfamily YP_002535648.1 PFAM: protein of unknown function DUF485; KEGG: gbm:Gbem_1423 protein of unknown function DUF485 YP_002535649.1 PFAM: acetyl-CoA hydrolase/transferase; KEGG: gur:Gura_1337 acetyl-CoA hydrolase YP_002535650.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; PAS fold-4 domain protein; SMART: ATPase AAA; KEGG: gbm:Gbem_1411 transcriptional regulator, NifA subfamily, fis family YP_002535651.1 PFAM: beta-lactamase domain protein; KEGG: gme:Gmet_2141 beta-lactamase-like YP_002535652.1 PFAM: ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: gme:Gmet_0108 ATPase YP_002535653.1 KEGG: gme:Gmet_0107 hypothetical protein YP_002535655.1 KEGG: gur:Gura_2254 PKD domain-containing protein YP_002535657.1 KEGG: gur:Gura_3492 hypothetical protein YP_002535658.1 PFAM: isochorismatase hydrolase; KEGG: gme:Gmet_2952 isochorismatase hydrolase YP_002535659.1 KEGG: amr:AM1_2255 hypothetical protein YP_002535660.1 PFAM: plasmid stabilization system; KEGG: deb:DehaBAV1_1039 addiction module antitoxin YP_002535661.1 TIGRFAM: extracellular repeat protein, HAF family; KEGG: mac:MA0957 hypothetical protein YP_002535662.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: gur:Gura_3924 filamentation induced by cAMP protein Fic YP_002535663.1 KEGG: glo:Glov_0428 hypothetical protein YP_002535664.1 TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein; KEGG: sat:SYN_02732 protein HipA YP_002535665.1 PFAM: helix-turn-helix domain protein; KEGG: glo:Glov_0168 transcriptional regulator, XRE family YP_002535666.1 KEGG: gbm:Gbem_1442 thioesterase YP_002535667.1 PFAM: major facilitator superfamily MFS_1; KEGG: ppd:Ppro_0859 major facilitator transporter YP_002535668.1 PFAM: protein of unknown function DUF294 nucleotidyltransferase KEGG: gbm:Gbem_1516 protein of unknown function DUF294 nucleotidyltransferase YP_002535669.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: lch:Lcho_3675 TRAP dicarboxylate transporter-DctP subunit YP_002535670.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: lch:Lcho_3674 TRAP dicarboxylate transporter, DctM subunit YP_002535671.1 KEGG: lch:Lcho_3673 hypothetical protein YP_002535672.1 KEGG: gme:Gmet_3299 hypothetical protein YP_002535673.1 KEGG: gme:Gmet_3298 hypothetical protein YP_002535674.1 TIGRFAM: benzoate-CoA ligase family; PFAM: AMP-dependent synthetase and ligase; KEGG: gme:Gmet_2143 benzoate-CoA ligase family YP_002535675.1 PFAM: GCN5-related N-acetyltransferase; acetyl-CoA hydrolase/transferase; KEGG: gme:Gmet_2142 GCN5-related N-acetyltransferase:acetyl-CoA hydrolase/transferase YP_002535676.1 KEGG: hau:Haur_3281 heavy metal translocating P-type ATPase YP_002535677.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: scl:sce2737 CzcA family cobalt/zinc/cadmium efflux transporter permease YP_002535678.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: scl:sce2736 CzcB family heavy metal efflux protein YP_002535679.1 KEGG: scl:sce2735 hypothetical protein YP_002535680.1 PFAM: outer membrane efflux protein; KEGG: mxa:MXAN_0985 cobalt-zinc-cadmium resistance protein YP_002535681.1 KEGG: gbm:Gbem_1938 hypothetical protein YP_002535682.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: gbm:Gbem_1440 transcriptional regulator, BadM/Rrf2 family YP_002535683.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gbm:Gbem_1441 GCN5-related N-acetyltransferase YP_002535684.1 TIGRFAM: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase; PFAM: Enoyl-CoA hydratase/isomerase; KEGG: gme:Gmet_2088 enoyl-CoA hydratase/isomerase YP_002535685.1 PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: gme:Gmet_2087 aldehyde ferredoxin oxidoreductase YP_002535686.1 KEGG: gme:Gmet_2086 4Fe-4S ferredoxin, iron-sulfur binding protein YP_002535687.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: gme:Gmet_2085 protein of unknown function DUF224, cysteine-rich region YP_002535688.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gme:Gmet_2084 4Fe-4S ferredoxin, iron-sulfur binding protein YP_002535689.1 Contains selenocysteine; PFAM: methyl-viologen-reducing hydrogenase delta subunit; KEGG: gme:Gmet_2083 methyl-viologen-reducing hydrogenase, delta subunit YP_002535690.1 PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: gme:Gmet_2081 NADH dehydrogenase (ubiquinone), 24 kDa subunit YP_002535691.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; 4Fe-4S ferredoxin, iron-sulphur binding, conserved site; KEGG: gme:Gmet_2080 respiratory-chain NADH dehydrogenase domain-containing protein YP_002535692.1 PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gme:Gmet_2079 4Fe-4S ferredoxin, iron-sulfur binding protein YP_002535693.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: eba:c2A179 transferase YP_002535694.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: hau:Haur_1203 3-hydroxybutyryl-CoA dehydrogenase YP_002535695.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: ATPase AAA; KEGG: sat:SYN_01635 sigma-54 dependent transcription regulator YP_002535696.1 KEGG: sat:SYN_01636 signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002535697.1 PFAM: AMP-dependent synthetase and ligase; KEGG: sen:SACE_2694 2,3-dihydroxybenzoate-AMP ligase YP_002535698.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bpt:Bpet1394 benzoate transport protein YP_002535699.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: mta:Moth_1780 IclR family transcriptional regulator YP_002535700.1 PFAM: Aldehyde ferredoxin oxidoreductase; KEGG: sat:SYN_02419 aldehyde dehydrogenase (ferredoxin), chain A YP_002535701.1 PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: sat:SYN_02419 aldehyde dehydrogenase (ferredoxin), chain A YP_002535702.1 KEGG: gme:Gmet_2086 4Fe-4S ferredoxin, iron-sulfur binding protein YP_002535703.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: gme:Gmet_2085 protein of unknown function DUF224, cysteine-rich region YP_002535704.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gme:Gmet_2084 4Fe-4S ferredoxin, iron-sulfur binding protein YP_002535705.1 Contains selenocysteine; PFAM: methyl-viologen-reducing hydrogenase delta subunit; KEGG: gme:Gmet_2083 methyl-viologen-reducing hydrogenase, delta subunit YP_002535706.1 PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: gbm:Gbem_1449 NADH dehydrogenase (ubiquinone) 24 kDa subunit YP_002535707.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; 4Fe-4S ferredoxin, iron-sulphur binding, conserved site; KEGG: sat:SYN_02426 NADH:ubiquinone oxidoreductase, NADH-binding subunit YP_002535708.1 PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gme:Gmet_2079 4Fe-4S ferredoxin, iron-sulfur binding protein YP_002535709.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: gur:Gura_0530 regulatory protein, IclR YP_002535710.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: gbm:Gbem_1452 acyl-CoA dehydrogenase domain protein YP_002535711.1 PFAM: carboxyl transferase; KEGG: gbm:Gbem_1453 carboxyl transferase YP_002535712.1 catalyzes the formation of pyruvate from oxaloacetate YP_002535713.1 NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate YP_002535714.1 PFAM: UbiE/COQ5 methyltransferase; methyltransferase type 11; methyltransferase type 12; KEGG: hch:HCH_03658 SAM-dependent methyltransferase YP_002535715.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: gbm:Gbem_1457 enoyl-CoA hydratase/isomerase YP_002535716.1 TIGRFAM: acetyl-CoA acetyltransferase; PFAM: thiolase; KEGG: gme:Gmet_2074 thiolase YP_002535717.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: gme:Gmet_2072 3-hydroxyacyl-CoA dehydrogenase YP_002535718.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: gbm:Gbem_1462 enoyl-CoA hydratase/isomerase YP_002535719.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: gme:Gmet_2070 hypothetical protein YP_002535720.1 KEGG: gur:Gura_3486 succinyl-CoA synthetase, beta subunit; TIGRFAM: succinyl-CoA synthetase, beta subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; ATP-grasp domain protein YP_002535721.1 TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: gme:Gmet_2260 succinyl-CoA synthetase (ADP-forming) alpha subunit YP_002535722.1 KEGG: glo:Glov_0468 hypothetical protein YP_002535723.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: gme:Gmet_2067 electron transfer flavoprotein subunit beta YP_002535724.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: gme:Gmet_2066 electron transfer flavoprotein subunit alpha YP_002535725.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: gme:Gmet_2065 hypothetical protein YP_002535726.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: gur:Gura_4346 regulatory protein, IclR YP_002535727.1 KEGG: glo:Glov_2577 hypothetical protein YP_002535728.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gbm:Gbem_1924 GCN5-related N-acetyltransferase YP_002535729.1 PFAM: type IV pilus assembly PilZ; KEGG: gbm:Gbem_0720 type IV pilus assembly PilZ YP_002535730.1 KEGG: gur:Gura_4271 histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002535732.1 PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: kcr:Kcr_0013 aldehyde ferredoxin oxidoreductase YP_002535733.1 KEGG: gur:Gura_3465 hypothetical protein YP_002535734.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: ATPase AAA; KEGG: ppd:Ppro_0885 fis family GAF modulated sigma54 specific transcriptional regulator YP_002535735.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: gur:Gura_3532 iron-containing alcohol dehydrogenase YP_002535736.1 KEGG: gur:Gura_3533 PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation E family protein; SMART: PAS domain containing protein; protein phosphatase 2C domain protein YP_002535737.1 KEGG: gme:Gmet_2733 cobyrinic acid a,c-diamide synthase family protein YP_002535738.1 PFAM: radical SAM protein; KEGG: gur:Gura_2413 radical SAM domain-containing protein YP_002535739.1 KEGG: gur:Gura_2417 hypothetical protein YP_002535740.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: gur:Gura_2420 iron-containing alcohol dehydrogenase YP_002535741.1 PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: gur:Gura_2421 aldehyde ferredoxin oxidoreductase YP_002535742.1 PFAM: thiamineS protein; KEGG: gur:Gura_2422 thiamineS protein YP_002535743.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: gur:Gura_2423 UBA/ThiF-type NAD/FAD binding protein YP_002535744.1 PFAM: TOBE domain protein; KEGG: ppd:Ppro_1452 TOBE domain-containing protein YP_002535745.1 PFAM: phosphate-selective porin O and P; KEGG: gme:Gmet_1042 phosphate-selective porin O and P YP_002535746.1 KEGG: gme:Gmet_1041 extracellular solute-binding protein YP_002535747.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gsu:GSU2702 ABC transporter, ATP-binding protein YP_002535748.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: gbm:Gbem_1174 alcohol dehydrogenase GroES domain protein YP_002535749.1 KEGG: gbm:Gbem_1672 hypothetical protein YP_002535750.1 KEGG: gbm:Gbem_0131 hypothetical protein YP_002535751.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: gbm:Gbem_0146 hemerythrin HHE cation binding domain protein YP_002535752.1 KEGG: gur:Gura_2615 hypothetical protein YP_002535753.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: pzu:PHZ_c1169 hemerythrin HHE cation binding region YP_002535754.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: gbm:Gbem_0139 alcohol dehydrogenase GroES domain protein YP_002535755.1 PFAM: cyclase/dehydrase; KEGG: gbm:Gbem_0140 cyclase/dehydrase YP_002535756.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: gur:Gura_3171 UDP-glucose 4-epimerase YP_002535757.1 PFAM: amidohydrolase; D-aminoacylase domain protein; amidohydrolase; KEGG: mta:Moth_1302 dihydroorotase YP_002535758.1 PFAM: Citrate transporter; KEGG: lpf:lpl1924 hypothetical protein YP_002535759.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: aas:Aasi_0854 hypothetical protein YP_002535760.1 KEGG: scl:sce1000 hypothetical protein YP_002535761.1 KEGG: gbm:Gbem_0816 outer membrane protein YP_002535762.1 PFAM: Formamidopyrimidine-DNA glycosylase catalytic domain protein; DNA glycosylase/AP lyase, H2TH DNA-binding; KEGG: gbm:Gbem_0815 formamidopyrimidine-DNA glycolase, H2TH DNA binding YP_002535763.1 KEGG: gur:Gura_2390 hypothetical protein YP_002535764.1 KEGG: sbn:Sbal195_4450 TonB-dependent receptor plug YP_002535765.1 PFAM: protein of unknown function DUF1003; KEGG: mex:Mext_1803 hypothetical protein YP_002535766.1 KEGG: gbm:Gbem_1374 hypothetical protein YP_002535768.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pca:Pcar_2249 response regulator/FOG:GGDEF domain protein YP_002535769.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: trehalose-phosphatase; KEGG: noc:Noc_1775 beta-phosphoglucomutase hydrolase YP_002535770.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: gur:Gura_2432 PpiC-type peptidyl-prolyl cis-trans isomerase YP_002535771.1 KEGG: gbm:Gbem_0527 hypothetical protein YP_002535772.1 PFAM: NHL repeat containing protein; KEGG: ote:Oter_4391 glucose/sorbosone dehydrogenase-like protein YP_002535773.1 KEGG: gbm:Gbem_1211 hypothetical protein YP_002535774.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis YP_002535775.1 KEGG: dge:Dgeo_2473 hypothetical protein YP_002535776.1 PFAM: TatD-related deoxyribonuclease; KEGG: gbm:Gbem_1818 TatD-related deoxyribonuclease YP_002535777.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: gbm:Gbem_1822 xylose isomerase domain protein TIM barrel YP_002535778.1 PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: gbm:Gbem_1823 type I phosphodiesterase/nucleotide pyrophosphatase YP_002535779.1 PFAM: UbiA prenyltransferase; KEGG: gbm:Gbem_1824 UbiA prenyltransferase YP_002535780.1 catalyzes the reduction of hydroxylamine to ammonia and water YP_002535781.1 KEGG: gsu:GSU2801 cytochrome c family protein YP_002535782.1 KEGG: dar:Daro_3613 phage tail region protein YP_002535783.1 KEGG: ppd:Ppro_3509 cytochrome c3 YP_002535784.1 KEGG: tfu:Tfu_1455 hypothetical protein YP_002535785.1 PFAM: protein of unknown function DUF1222; KEGG: mva:Mvan_4797 hypothetical protein YP_002535786.1 KEGG: gur:Gura_0534 hypothetical protein YP_002535787.1 PFAM: outer membrane efflux protein; KEGG: gur:Gura_0533 outer membrane efflux protein YP_002535788.1 PFAM: glycosyl transferase family 39; KEGG: cth:Cthe_3095 glycosyl transferase family protein YP_002535789.1 PFAM: glycosyl transferase family 2; KEGG: cth:Cthe_3094 glycosyl transferase family protein YP_002535790.1 KEGG: mca:MCA1438 hypothetical protein YP_002535791.1 PFAM: GtrA family protein; KEGG: bsu:BSU18170 hypothetical protein YP_002535792.1 KEGG: xft:PD0950 serine protease YP_002535793.1 KEGG: gbm:Gbem_0790 hypothetical protein YP_002535794.1 PFAM: ABC transporter transmembrane region; ABC transporter; SMART: ATPase AAA; KEGG: ank:AnaeK_1126 ABC transporter-related protein YP_002535797.1 KEGG: pca:Pcar_1094 hypothetical protein YP_002535798.1 TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein; KEGG: sun:SUN_1606 hypothetical protein YP_002535800.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sfu:Sfum_1255 glyoxalase/bleomycin resistance protein/dioxygenase YP_002535801.1 KEGG: sgr:SGR_3221 hypothetical protein YP_002535802.1 PFAM: Thrombospondin type 3 repeat; OmpA/MotB domain protein; KEGG: ppd:Ppro_0441 OmpA/MotB domain-containing protein YP_002535803.1 TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; KEGG: gsu:GSU2794 large-conductance mechanosensitive channel YP_002535804.1 PFAM: PEBP family protein; KEGG: gme:Gmet_1009 PBP family phospholipid-binding protein YP_002535805.1 TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: met:M446_5721 haloacid dehalogenase, type II YP_002535806.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: gbm:Gbem_0372 peptidylprolyl isomerase FKBP-type YP_002535807.1 KEGG: azo:azo1737 hypothetical protein YP_002535808.1 TIGRFAM: DNA ligase D; DNA ligase D, 3'-phosphoesterase domain protein; DNA polymerase LigD, polymerase domain protein; DNA polymerase LigD, ligase domain protein; PFAM: DNA primase small subunit; ATP dependent DNA ligase domain protein; ATP dependent DNA ligase; KEGG: gbm:Gbem_0128 DNA ligase D YP_002535809.1 TIGRFAM: Ku protein; PFAM: Ku domain protein; KEGG: gbm:Gbem_0141 Ku protein YP_002535810.1 KEGG: gbm:Gbem_2424 hypothetical protein YP_002535811.1 KEGG: gme:Gmet_1013 rhodanese-like protein YP_002535812.1 KEGG: pcu:pc0850 hypothetical protein YP_002535813.1 KEGG: jan:Jann_2211 hypothetical protein YP_002535814.1 PFAM: protein of unknown function DUF1469; KEGG: gbm:Gbem_1384 protein of unknown function DUF1469 YP_002535815.1 KEGG: sus:Acid_2963 OmpA/MotB domain-containing protein YP_002535816.1 PFAM: protein of unknown function DUF1328; KEGG: gbm:Gbem_0127 protein of unknown function DUF1328 YP_002535817.1 KEGG: aav:Aave_2393 hypothetical protein YP_002535818.1 PFAM: protein of unknown function UPF0118; KEGG: gbm:Gbem_2212 protein of unknown function UPF0118 YP_002535819.1 PFAM: surface antigen (D15); KEGG: gbm:Gbem_3176 surface antigen (D15) YP_002535820.1 PFAM: protein of unknown function DUF490; KEGG: ppd:Ppro_3265 hypothetical protein YP_002535821.1 KEGG: gme:Gmet_2953 protoporphyrinogen oxidase YP_002535822.1 PFAM: KWG Leptospira repeat protein; KEGG: cts:Ctha_0023 KWG Leptospira repeat protein YP_002535823.1 PFAM: helix-turn-helix domain protein; KEGG: gbm:Gbem_1829 transcriptional regulator, XRE family YP_002535824.1 Catalyzes the formylation of AICAR with 10-formyl-tetrahydrofolate to yield FAICAR and tetrahydrofolate YP_002535825.1 KEGG: gsu:GSU0543 Slp family outer membrane lipoprotein YP_002535826.1 PFAM: NUDIX hydrolase; KEGG: gme:Gmet_3448 NUDIX hydrolase YP_002535827.1 SMART: zinc finger CDGSH-type domain protein; KEGG: gbm:Gbem_3093 zinc finger CDGSH-type domain protein YP_002535828.1 PFAM: YceI family protein; KEGG: gbm:Gbem_1207 YceI family protein YP_002535829.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gbm:Gbem_1733 ABC transporter protein YP_002535830.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gbm:Gbem_1734 binding-protein-dependent transport systems inner membrane component YP_002535831.1 TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; KEGG: gbm:Gbem_1735 twin-arginine translocation pathway signal YP_002535832.1 KEGG: gme:Gmet_1902 carbon-monoxide dehydrogenase, catalytic subunit; TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit; PFAM: Prismane YP_002535833.1 PFAM: peptidase S10 serine carboxypeptidase; KEGG: gur:Gura_2114 peptidase S10, serine carboxypeptidase YP_002535834.1 TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: gsu:GSU0276 HlyD family secretion protein YP_002535835.1 PFAM: ABC transporter transmembrane region; ABC transporter; SMART: ATPase AAA; KEGG: gsu:GSU0277 ABC transporter, ATP-binding/permease protein YP_002535836.1 PFAM: outer membrane efflux protein; KEGG: gsu:GSU0278 outer membrane efflux protein YP_002535837.1 PFAM: sulfotransferase; hypothetical protein; Tetratricopeptide TPR_4; hypothetical protein; SMART: hypothetical protein; KEGG: dps:DP2106 hypothetical protein YP_002535838.1 PFAM: Cadherin; KEGG: mmw:Mmwyl1_1672 beta strand repeat-containing protein YP_002535839.1 KEGG: gsu:GSU1615 hypothetical protein YP_002535841.1 PFAM: radical SAM protein; KEGG: glo:Glov_0108 radical SAM domain protein YP_002535842.1 KEGG: glo:Glov_0109 hypothetical protein YP_002535843.1 KEGG: gur:Gura_4332 GTPase-like protein YP_002535844.1 PFAM: Roadblock/LC7 family protein; KEGG: gur:Gura_4331 roadblock/LC7 family protein YP_002535845.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; 4Fe-4S ferredoxin, iron-sulphur binding, conserved site; KEGG: gur:Gura_4330 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein YP_002535846.1 involved in a recombinational process of DNA repair, independent of the recBC complex YP_002535847.1 PFAM: conserved hypothetical protein; KEGG: gur:Gura_4328 hypothetical protein YP_002535848.1 KEGG: gur:Gura_4327 DNA polymerase III, subunits gamma and tau; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: ATPase AAA; SMART: ATPase AAA YP_002535849.1 PFAM: UvrD/REP helicase; KEGG: gur:Gura_4326 UvrD/REP helicase YP_002535850.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; KEGG: gur:Gura_4325 glutamyl-tRNA(Gln) amidotransferase, C subunit YP_002535851.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA YP_002535852.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA YP_002535853.1 KEGG: gur:Gura_4322 aIF-2BI family translation initiation factor; TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related YP_002535854.1 PFAM: glutamate-ammonia ligase adenylyltransferase; GlnD PII-uridylyltransferase; KEGG: gur:Gura_4321 (glutamate--ammonia-ligase) adenylyltransferase YP_002535855.1 PFAM: thioesterase; KEGG: gur:Gura_4320 thioesterase YP_002535857.1 KEGG: ppd:Ppro_1113 hypothetical protein YP_002535858.1 PFAM: helix-turn-helix domain protein; KEGG: ppd:Ppro_1114 XRE family plasmid maintenance system antidote protein YP_002535859.1 KEGG: gur:Gura_4315 hypothetical protein YP_002535861.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis YP_002535862.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme YP_002535863.1 PFAM: K potassium transporter; KEGG: glo:Glov_3222 K potassium transporter YP_002535864.1 SMART: PrkA AAA domain protein; KEGG: gur:Gura_4311 serine protein kinase, PrkA YP_002535865.1 KEGG: gur:Gura_4310 hypothetical protein YP_002535866.1 KEGG: gur:Gura_4309 hypothetical protein YP_002535867.1 PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: gur:Gura_4308 serine protein kinase, PrkA YP_002535868.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth YP_002535869.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring YP_002535870.1 KEGG: gur:Gura_4305 hypothetical protein YP_002535871.1 PFAM: protein of unknown function DUF507; KEGG: gur:Gura_4304 hypothetical protein YP_002535872.1 KEGG: gur:Gura_4303 hypothetical protein YP_002535873.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate YP_002535874.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: gur:Gura_4299 major facilitator transporter YP_002535875.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: gur:Gura_4298 phospholipid/glycerol acyltransferase YP_002535876.1 KEGG: gur:Gura_4296 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD/DEAH box helicases YP_002535877.1 KEGG: gur:Gura_4295 protease Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein YP_002535878.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: gur:Gura_4294 integral membrane sensor signal transduction histidine kinase YP_002535879.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: gur:Gura_4293 two component transcriptional regulator YP_002535880.1 PFAM: protein of unknown function DUF299; KEGG: gur:Gura_4292 hypothetical protein YP_002535881.1 TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: gur:Gura_4291 amidohydrolase YP_002535882.1 TIGRFAM: ribosomal protein L11 methyltransferase; PFAM: methyltransferase small; ribosomal L11 methyltransferase; methyltransferase type 11; KEGG: gur:Gura_4290 ribosomal protein L11 methyltransferase YP_002535883.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase YP_002535884.1 KEGG: gur:Gura_4288 hypothetical protein YP_002535885.1 PFAM: HRDC domain protein; 3'-5' exonuclease; KEGG: gur:Gura_4287 3'-5' exonuclease YP_002535886.1 TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: gur:Gura_4286 histidinol-phosphate aminotransferase YP_002535887.1 PFAM: radical SAM protein; KEGG: gur:Gura_4285 radical SAM domain-containing protein YP_002535888.1 PFAM: radical SAM protein; KEGG: gur:Gura_4284 radical SAM domain-containing protein YP_002535889.1 TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; KEGG: gur:Gura_4283 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_002535890.1 UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin YP_002535891.1 KEGG: glo:Glov_1455 M6 family metalloprotease domain protein YP_002535892.1 PFAM: sodium:dicarboxylate symporter; KEGG: gtn:GTNG_1819 proton/glutamate symporter family protein YP_002535893.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: ppd:Ppro_0547 hypothetical protein YP_002535894.1 KEGG: tth:TTC0748 L-lactate dehydrogenase; TIGRFAM: L-lactate dehydrogenase; PFAM: Lactate/malate dehydrogenase YP_002535895.1 KEGG: gur:Gura_0639 hypothetical protein YP_002535896.1 KEGG: gur:Gura_4280 hypothetical protein YP_002535897.1 PFAM: glycosyl transferase family 2; KEGG: gur:Gura_4279 glycosyl transferase family protein YP_002535898.1 PFAM: NDP-hexose 23-dehydratase; KEGG: gur:Gura_4278 NDP-hexose 2,3-dehydratase YP_002535899.1 PFAM: Semialdehyde dehydrogenase NAD - binding; oxidoreductase domain protein; Oxidoreductase domain; KEGG: gur:Gura_4277 oxidoreductase domain-containing protein YP_002535900.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: gur:Gura_4276 glutamine--scyllo-inositol transaminase YP_002535901.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: gur:Gura_4275 methyltransferase type 11 YP_002535902.1 KEGG: gbm:Gbem_0454 hypothetical protein YP_002535903.1 KEGG: gbm:Gbem_2307 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; ATPase AAA; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA YP_002535905.1 PFAM: response regulator receiver; type IV pilus assembly PilZ; KEGG: gbm:Gbem_2803 response regulator receiver modulated PilZ sensor protein YP_002535906.1 PFAM: hypothetical protein; hypothetical protein; SMART: hypothetical protein; KEGG: gur:Gura_1321 hypothetical protein YP_002535907.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ppd:Ppro_3550 ABC transporter YP_002535908.1 KEGG: gur:Gura_2457 hypothetical protein YP_002535909.1 KEGG: gur:Gura_4274 twitching motility protein; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: ATPase AAA YP_002535910.1 PFAM: General secretory system II protein E domain protein; KEGG: gur:Gura_4273 general secretion pathway protein E YP_002535911.1 PFAM: thiamine biosynthesis protein; KEGG: gur:Gura_4272 thiamine biosynthesis protein YP_002535912.1 PFAM: glycosyl transferase family 51; KEGG: gur:Gura_4269 glycosyl transferase family protein YP_002535913.1 KEGG: gur:Gura_4268 4-hydroxythreonine-4-phosphate dehydrogenase; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA YP_002535914.1 KEGG: gur:Gura_4266 hypothetical protein YP_002535915.1 PFAM: protein of unknown function UPF0153; KEGG: gur:Gura_4265 hypothetical protein YP_002535916.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the epsilon subunit is part of the catalytic core of the ATP synthase complex YP_002535917.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit YP_002535918.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the gamma chain is a regulatory subunit YP_002535919.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit YP_002535920.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex YP_002535921.1 PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: gur:Gura_4259 H+-transporting two-sector ATPase, B/B' subunit YP_002535922.1 PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: gur:Gura_4258 H+-transporting two-sector ATPase, B/B' subunit YP_002535923.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: gur:Gura_4257 ParB-like partition protein YP_002535924.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: gur:Gura_4256 cobyrinic acid a,c-diamide synthase YP_002535925.1 KEGG: gur:Gura_4254 PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: histidine kinase HAMP region domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002535926.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: gur:Gura_4253 hydrolase YP_002535927.1 TIGRFAM: ATP synthase F0, C subunit; PFAM: H+transporting two-sector ATPase C subunit; KEGG: gur:Gura_4249 ATP synthase F0, C subunit YP_002535928.1 TIGRFAM: ATP synthase F0, A subunit; PFAM: H+transporting two-sector ATPase A subunit; KEGG: gur:Gura_4248 ATP synthase F0, A subunit YP_002535929.1 PFAM: ATP synthase I; KEGG: gur:Gura_4247 hypothetical protein YP_002535930.1 KEGG: gur:Gura_4246 hypothetical protein YP_002535931.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway YP_002535932.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: gur:Gura_4244 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 YP_002535933.1 KEGG: gur:Gura_4243 NADH-quinone oxidoreductase, B subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit YP_002535934.1 KEGG: gur:Gura_4242 NADH (or F420H2) dehydrogenase, subunit C; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit YP_002535935.1 KEGG: gme:Gmet_3352 NADH dehydrogenase I, D subunit; TIGRFAM: NADH dehydrogenase I, D subunit; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa YP_002535936.1 TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: gur:Gura_4240 NADH dehydrogenase (ubiquinone), 24 kDa subunit YP_002535937.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; 4Fe-4S ferredoxin, iron-sulphur binding, conserved site; KEGG: gur:Gura_4239 NADH dehydrogenase (quinone) YP_002535938.1 PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; 4Fe-4S ferredoxin, iron-sulphur binding, conserved site; KEGG: gur:Gura_4238 molybdopterin oxidoreductase YP_002535939.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: gbm:Gbem_3919 respiratory-chain NADH dehydrogenase subunit 1 YP_002535940.1 TIGRFAM: NADH-quinone oxidoreductase, chain I; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gbm:Gbem_3918 NADH-quinone oxidoreductase, chain I YP_002535941.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: gur:Gura_4235 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 YP_002535942.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: gur:Gura_4234 NADH-ubiquinone oxidoreductase, chain 4L YP_002535943.1 KEGG: gur:Gura_4233 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I) YP_002535944.1 KEGG: gur:Gura_4232 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_002535945.1 KEGG: gur:Gura_4231 proton-translocating NADH-quinone oxidoreductase, chain N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_002535946.1 PFAM: outer membrane efflux protein; KEGG: gur:Gura_4230 outer membrane efflux protein YP_002535947.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: gme:Gmet_3128 secretion protein HlyD YP_002535948.1 PFAM: acriflavin resistance protein; KEGG: gur:Gura_4228 acriflavin resistance protein YP_002535949.1 TIGRFAM: C_GCAxxG_C_C family protein; KEGG: gur:Gura_4227 C_GCAxxG_C_C family protein YP_002535950.1 KEGG: gur:Gura_4226 hypothetical protein YP_002535951.1 PFAM: beta-lactamase domain protein; KEGG: gur:Gura_4225 beta-lactamase domain-containing protein YP_002535952.1 PFAM: Rhodanese domain protein; KEGG: gur:Gura_4224 rhodanese domain-containing protein YP_002535953.1 PFAM: regulatory protein ArsR; KEGG: gur:Gura_4223 regulatory protein, ArsR YP_002535954.1 PFAM: chemotaxis sensory transducer; KEGG: gur:Gura_4222 methyl-accepting chemotaxis sensory transducer YP_002535955.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: gur:Gura_4221 PAS/PAC sensor signal transduction histidine kinase YP_002535956.1 TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: gsu:GSU0402 hemerythrin family protein YP_002535957.1 PFAM: response regulator receiver; KEGG: gur:Gura_4220 response regulator receiver protein YP_002535958.1 KEGG: gur:Gura_4219 inhibitor of MCP methylation CheC-like protein YP_002535959.1 PFAM: response regulator receiver; KEGG: gur:Gura_4218 response regulator receiver protein YP_002535960.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: gur:Gura_4217 hypothetical protein YP_002535961.1 TIGRFAM: flagellar basal-body rod protein FlgB; KEGG: gur:Gura_4216 flagellar basal-body rod protein FlgB YP_002535962.1 TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: gur:Gura_4215 flagellar basal-body rod protein FlgC YP_002535963.1 TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: gur:Gura_4214 flagellar hook-basal body complex subunit FliE YP_002535964.1 TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring domain protein; KEGG: gur:Gura_4213 flagellar M-ring protein FliF YP_002535965.1 PFAM: flagellar motor switch protein FliG; KEGG: gur:Gura_4212 flagellar motor switch protein FliG YP_002535966.1 PFAM: flagellar assembly protein FliH; KEGG: gur:Gura_4211 flagellar biosynthesis/type III secretory pathway protein-like protein YP_002535967.1 KEGG: gur:Gura_4210 flagellar protein export ATPase FliI; TIGRFAM: ATPase, FliI/YscN family; ATPase FliI/YscN; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; SMART: ATPase AAA YP_002535968.1 TIGRFAM: flagellar export protein FliJ; KEGG: gur:Gura_4209 flagellar export protein FliJ YP_002535969.1 KEGG: gur:Gura_4208 hypothetical protein YP_002535970.1 PFAM: flagellar hook-length control protein; KEGG: gur:Gura_4207 flagellar hook-length control protein YP_002535971.1 PFAM: flagellar hook capping protein; KEGG: gur:Gura_4206 flagellar hook capping protein YP_002535972.1 TIGRFAM: flagellar operon protein; KEGG: gur:Gura_4205 flagellar operon protein YP_002535973.1 PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: gur:Gura_4204 hypothetical protein YP_002535974.1 PFAM: flagellar basal body-associated protein FliL; KEGG: gur:Gura_4203 flagellar basal body-associated protein FliL YP_002535975.1 PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: gur:Gura_4202 flagellar motor switch protein FliM YP_002535976.1 TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: gur:Gura_4201 flagellar motor switch protein FliN YP_002535977.1 KEGG: gur:Gura_4200 hypothetical protein YP_002535978.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus YP_002535979.1 TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; KEGG: gur:Gura_4198 flagellar biosynthetic protein FliQ YP_002535980.1 TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; KEGG: gur:Gura_4197 flagellar biosynthetic protein FliR YP_002535981.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export YP_002535982.1 PFAM: GPR1/FUN34/yaaH family protein; KEGG: gme:Gmet_1126 GPR1/FUN34/YaaH YP_002535983.1 PFAM: acetyl-CoA hydrolase/transferase; KEGG: gme:Gmet_1125 acetyl-CoA hydrolase/transferase YP_002535984.1 PFAM: Citrate synthase; KEGG: gme:Gmet_1124 type I citrate synthase YP_002535985.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: gme:Gmet_1121 GntR family transcriptional regulator YP_002535986.1 PFAM: A-factor biosynthesis repeat-containing protein; KEGG: gvi:gll2829 similar to polyketide synthase YP_002535987.1 KEGG: afw:Anae109_2593 cytochrome c family protein YP_002535988.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: sco:SCO5893 oxidoreductase YP_002535989.1 KEGG: gtn:GTNG_1725 hypothetical protein YP_002535990.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; KEGG: rxy:Rxyl_2112 HAD-superfamily subfamily IB, PSPase-like protein YP_002535991.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: lpc:LPC_1504 transcriptional regulator OruR YP_002535992.1 KEGG: bth:BT_0840 hypothetical protein YP_002535993.1 KEGG: amc:MADE_03762 hypothetical protein YP_002535996.1 PFAM: NADPH-dependent FMN reductase; KEGG: gur:Gura_3523 NADPH-dependent FMN reductase YP_002535997.1 PFAM: regulatory protein ArsR; KEGG: ava:Ava_4762 ArsR family transcriptional regulator YP_002535998.1 PFAM: protein of unknown function DUF891; KEGG: plt:Plut_0606 hypothetical protein YP_002535999.1 KEGG: gme:Gmet_2961 hypothetical protein YP_002536000.1 KEGG: gur:Gura_4193 alpha-glucan phosphorylase; TIGRFAM: alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35 YP_002536001.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: ATPase AAA; KEGG: gur:Gura_4192 two component, sigma-54 specific, fis family transcriptional regulator YP_002536002.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: gur:Gura_4191 integral membrane sensor signal transduction histidine kinase YP_002536003.1 KEGG: gbm:Gbem_3817 hypothetical protein YP_002536004.1 KEGG: gur:Gura_4190 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: Metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region YP_002536005.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential YP_002536006.1 PFAM: cobalbumin biosynthesis protein; KEGG: gur:Gura_4188 adenosylcobinamide-phosphate guanylyltransferase YP_002536007.1 catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole YP_002536008.1 TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; KEGG: gur:Gura_4186 cobalamin 5'-phosphate synthase YP_002536009.1 TIGRFAM: alpha-ribazole phosphatase; PFAM: phosphoglycerate mutase; KEGG: gur:Gura_4185 phosphoglycerate mutase YP_002536010.1 responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid YP_002536011.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine YP_002536012.1 catalyzes the ATP-dependent transport of cobalt YP_002536013.1 KEGG: gbm:Gbem_3807 hypothetical protein YP_002536014.1 TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: gur:Gura_4180 cobalt ABC transporter, inner membrane subunit CbiQ YP_002536015.1 KEGG: gur:Gura_4179 cobalt ABC transporter, ATPase subunit; TIGRFAM: cobalt ABC transporter, ATPase subunit; PFAM: ABC transporter; SMART: ATPase AAA YP_002536016.1 PFAM: transglutaminase domain protein; KEGG: gur:Gura_4178 transglutaminase domain-containing protein YP_002536017.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; Fe-S cluster domain protein; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: gur:Gura_4176 sigma-54 dependent trancsriptional regulator YP_002536018.1 KEGG: gur:Gura_4175 CopG/DNA-binding domain-containing protein YP_002536019.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA YP_002536020.1 PFAM: response regulator receiver; KEGG: gur:Gura_4173 response regulator receiver protein YP_002536021.1 PFAM: chemotaxis protein CheB; response regulator receiver; KEGG: gur:Gura_4172 response regulator receiver modulated chemotaxis protein CheB YP_002536022.1 PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: gur:Gura_4171 chemotaxis protein CheA YP_002536023.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: gur:Gura_4170 methyl-accepting chemotaxis sensory transducer YP_002536024.1 PFAM: CheW domain protein; KEGG: gur:Gura_4169 chemotaxis protein CheW YP_002536025.1 KEGG: gur:Gura_4168 response regulator receiver protein; PFAM: MCP methyltransferase CheR-type; hypothetical protein; response regulator receiver; SMART: hypothetical protein YP_002536026.1 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_002536027.1 catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate YP_002536028.1 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers YP_002536029.1 catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis YP_002536030.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: gur:Gura_4161 GntR family transcriptional regulator YP_002536031.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; Ion transport 2 domain protein; KEGG: gur:Gura_4160 TrkA domain-containing protein YP_002536032.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: gur:Gura_4159 xylose isomerase domain-containing protein YP_002536033.1 KEGG: gur:Gura_4156 hypothetical protein YP_002536034.1 PFAM: lipolytic protein G-D-S-L family; KEGG: ppd:Ppro_0043 GDSL family lipase YP_002536035.1 PFAM: O-methyltransferase family 2; methyltransferase type 12; KEGG: gur:Gura_4154 O-methyltransferase family protein YP_002536036.1 PFAM: NUDIX hydrolase; KEGG: ppd:Ppro_2564 NUDIX hydrolase YP_002536037.1 KEGG: cti:RALTA_A1703 hypothetical protein YP_002536038.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gur:Gura_0894 ABC transporter YP_002536039.1 PFAM: protein of unknown function DUF214; KEGG: gur:Gura_0895 hypothetical protein YP_002536040.1 KEGG: gur:Gura_0896 hypothetical protein YP_002536041.1 KEGG: gbm:Gbem_1019 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; ATPase AAA; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA YP_002536042.1 PFAM: peptidase M48 Ste24p; KEGG: gur:Gura_4143 peptidase M48, Ste24p YP_002536043.1 PFAM: protein of unknown function DUF898 transmembrane; KEGG: gur:Gura_4142 hypothetical protein YP_002536044.1 KEGG: glo:Glov_1562 hypothetical protein YP_002536045.1 KEGG: gur:Gura_4140 hypothetical protein YP_002536046.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: swo:Swol_0158 hypothetical protein YP_002536047.1 KEGG: swo:Swol_0159 hypothetical protein YP_002536048.1 TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; KEGG: bpl:BURPS1106A_A2661 hypothetical protein YP_002536049.1 KEGG: afe:Lferr_1736 phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthase and related enzyme YP_002536050.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: xcv:XCV1110 site-specific DNA-methyltransferase (cytosine-N(4)-specific) YP_002536051.1 KEGG: cpb:Cphamn1_1063 type II site-specific deoxyribonuclease YP_002536052.1 PFAM: helix-turn-helix domain protein; KEGG: nmu:Nmul_D2824 XRE family transcriptional regulator YP_002536053.1 KEGG: nmu:Nmul_D2822 hypothetical protein YP_002536055.1 KEGG: swo:Swol_2249 hypothetical protein YP_002536056.1 KEGG: swo:Swol_2250 hypothetical protein YP_002536057.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: bxe:Bxe_B0118 HesA/MoeB/ThiF family protein YP_002536059.1 PFAM: Resolvase domain; KEGG: gme:Gmet_3142 resolvase-like protein YP_002536062.1 KEGG: gme:Gmet_3135 hypothetical protein YP_002536064.1 PFAM: helix-turn-helix domain protein; KEGG: ppd:Ppro_1907 XRE family transcriptional regulator YP_002536068.1 PFAM: Resolvase domain; Recombinase; KEGG: gme:Gmet_3143 resolvase-like:recombinase YP_002536069.1 KEGG: gur:Gura_4137 undecaprenol kinase; TIGRFAM: undecaprenol kinase; PFAM: Bacitracin resistance protein BacA YP_002536070.1 PFAM: protein of unknown function DUF47; KEGG: gur:Gura_4136 hypothetical protein YP_002536071.1 PFAM: phosphate transporter; KEGG: gur:Gura_4135 phosphate transporter YP_002536072.1 KEGG: gur:Gura_4133 hypothetical protein YP_002536073.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis YP_002536074.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway YP_002536075.1 KEGG: gur:Gura_4130 nicotinate (nicotinamide) nucleotide adenylyltransferase; TIGRFAM: cytidyltransferase-related domain protein; nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase YP_002536076.1 TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: gur:Gura_4129 iojap-like protein YP_002536077.1 PFAM: protein of unknown function DUF163; KEGG: gur:Gura_4128 hypothetical protein YP_002536078.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate YP_002536079.1 PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: gme:Gmet_1815 NAD(P)H dehydrogenase (quinone):NADPH-dependent FMN reductase YP_002536080.1 PFAM: protein of unknown function DUF1121; KEGG: gur:Gura_4126 hypothetical protein YP_002536081.1 KEGG: gur:Gura_4125 amidophosphoribosyltransferase-like protein YP_002536082.1 KEGG: gur:Gura_4124 hypothetical protein YP_002536083.1 KEGG: gur:Gura_4123 hypothetical protein YP_002536084.1 SMART: helicase c2; DEAD/DEAH box helicases; KEGG: gur:Gura_4122 helicase C2 YP_002536085.1 KEGG: gur:Gura_4121 hypothetical protein YP_002536086.1 PFAM: helix-turn-helix domain protein; KEGG: gur:Gura_4120 XRE family transcriptional regulator YP_002536087.1 KEGG: gur:Gura_4119 radical SAM protein; TIGRFAM: conserved hypothetical protein; PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB YP_002536088.1 PFAM: surface antigen (D15); KEGG: gur:Gura_4112 surface antigen (D15) YP_002536089.1 membrane protein involved in the flagellar export apparatus YP_002536090.1 PFAM: GTP-binding signal recognition particle SRP54 G- domain; SMART: ATPase AAA; KEGG: gur:Gura_4110 GTP-binding signal recognition particle YP_002536091.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: gur:Gura_4109 cobyrinic acid a,c-diamide synthase YP_002536092.1 KEGG: gur:Gura_4108 RNA polymerase, sigma 28 subunit, FliA/WhiG; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2 YP_002536093.1 TIGRFAM: flagellar basal-body rod protein FlgF; flagellar basal-body rod FlgF family protein; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: gur:Gura_4107 flagellar basal body rod protein YP_002536094.1 makes up the distal portion of the flagellar basal body rod YP_002536095.1 TIGRFAM: flagella basal body P-ring formation protein FlgA; PFAM: SAF domain protein; KEGG: gur:Gura_4105 SAF domain-containing protein YP_002536096.1 PFAM: flagellar L-ring protein; KEGG: gur:Gura_4104 flagellar L-ring protein YP_002536097.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum YP_002536098.1 PFAM: flagellar protein FlgJ; KEGG: gur:Gura_4102 rod binding protein-like protein YP_002536099.1 PFAM: Anti-sigma-28 factor FlgM family protein; KEGG: gbm:Gbem_3757 negative regulator of flagellin synthesis YP_002536100.1 PFAM: FlgN family protein; KEGG: gbm:Gbem_3756 hypothetical protein YP_002536101.1 TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: gbm:Gbem_3755 flagellar hook-associated protein FlgK YP_002536102.1 TIGRFAM: flagellar hook-associated protein 3; KEGG: gbm:Gbem_3754 flagellar hook-associated protein 3 YP_002536103.1 PFAM: flagellar FlbD family protein; KEGG: gur:Gura_4078 flagellar FlbD family protein YP_002536104.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: gur:Gura_4079 MotA/TolQ/ExbB proton channel YP_002536105.1 PFAM: OmpA/MotB domain protein; KEGG: gur:Gura_4080 OmpA/MotB domain-containing protein YP_002536106.1 PFAM: type IV pilus assembly PilZ; KEGG: gur:Gura_4082 type IV pilus assembly PilZ YP_002536107.1 PFAM: hypothetical protein; hypothetical protein; SMART: hypothetical protein; KEGG: gbm:Gbem_3748 hypothetical protein YP_002536108.1 PFAM: hypothetical protein; Exostosin family protein; Tetratricopeptide TPR_4; hypothetical protein; SMART: hypothetical protein; KEGG: glo:Glov_3353 exostosin family protein YP_002536109.1 PFAM: flagellin domain protein; KEGG: gbm:Gbem_0106 flagellin domain protein YP_002536110.1 KEGG: gbm:Gbem_3745 hypothetical protein YP_002536111.1 PFAM: flagellar FlbT family protein; KEGG: gbm:Gbem_3744 flagellar FlbT family protein YP_002536112.1 acts as an activator of flagellin translation and may be required for filament secretion or assembly; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagellum YP_002536113.1 KEGG: dvu:DVU3043 hypothetical protein YP_002536114.1 PFAM: hypothetical protein; Tetratricopeptide TPR_3; hypothetical protein; SMART: hypothetical protein; KEGG: gbm:Gbem_3742 tetratricopeptide TPR_2 repeat protein YP_002536115.1 PFAM: hypothetical protein; hypothetical protein; methyltransferase type 11; methyltransferase type 12; SMART: hypothetical protein; KEGG: nmu:Nmul_A0911 tetratricopeptide TPR_4 YP_002536116.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: ter:Tery_1754 FkbM family methyltransferase YP_002536117.1 PFAM: glycosyl transferase family 2; glycosyl transferase group 1; hypothetical protein; methionine biosynthesis MetW protein; Tetratricopeptide TPR_3; hypothetical protein; methyltransferase type 11; methyltransferase type 12; SMART: hypothetical protein; KEGG: gbm:Gbem_3740 glycosyl transferase family 2 YP_002536118.1 SMART: hypothetical protein; KEGG: tpt:Tpet_1061 hypothetical protein YP_002536119.1 TIGRFAM: methyltransferase FkbM family; KEGG: ade:Adeh_2528 methyltransferase FkbM YP_002536120.1 KEGG: cbu:CBU_0685 hypothetical protein YP_002536121.1 PFAM: radical SAM protein; KEGG: xau:Xaut_0967 radical SAM domain-containing protein YP_002536124.1 PFAM: Carbamoyltransferase; KEGG: bid:Bind_1557 carbamoyltransferase YP_002536125.1 PFAM: cobalamin B12-binding domain protein; radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mgm:Mmc1_0710 radical SAM domain protein YP_002536126.1 PFAM: NUDIX hydrolase; KEGG: amr:AM1_5401 NUDIX hydrolase YP_002536127.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: rpe:RPE_1520 methyltransferase type 11 YP_002536128.1 PFAM: radical SAM protein; KEGG: tdn:Suden_0177 radical SAM family protein YP_002536129.1 PFAM: NAD-dependent epimerase/dehydratase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KEGG: pab:PAB0789 dTDP-4-dehydrorhamnose reductase YP_002536130.1 PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cff:CFF8240_1592 radical SAM domain-containing protein YP_002536131.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: cff:CFF8240_1590 methyltransferase YP_002536132.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: cff:CFF8240_1589 transketolase family protein YP_002536133.1 PFAM: Transketolase domain protein; KEGG: cff:CFF8240_1587 transketolase, N-terminal subunit YP_002536134.1 KEGG: glo:Glov_3383 glycosyl transferase family 9 YP_002536135.1 PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cff:CFF8240_1586 radical SAM family protein YP_002536136.1 PFAM: radical SAM protein; KEGG: glo:Glov_3384 radical SAM domain protein YP_002536137.1 PFAM: hypothetical protein; hypothetical protein; SMART: hypothetical protein; KEGG: gbm:Gbem_3719 hypothetical protein YP_002536138.1 PFAM: O-methyltransferase family 3; KEGG: gur:Gura_4077 O-methyltransferase family protein YP_002536139.1 TIGRFAM: methionine-R-sulfoxide reductase; PFAM: methionine sulfoxide reductase B; KEGG: gur:Gura_4073 methionine-R-sulfoxide reductase YP_002536141.1 KEGG: ppd:Ppro_2822 hypothetical protein YP_002536142.1 KEGG: gur:Gura_4071 hypothetical protein YP_002536143.1 PFAM: protein of unknown function DUF606; KEGG: gur:Gura_4070 hypothetical protein YP_002536144.1 PFAM: Class I peptide chain release factor; KEGG: gur:Gura_4067 class I peptide chain release factor YP_002536145.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: gur:Gura_4066 NADH dehydrogenase (quinone) YP_002536146.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes YP_002536147.1 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome YP_002536148.1 flavin dependent thymidylate synthase; ThyX; thymidylate synthase complementing protein; catalyzes the formation of dTMP and tetrahydrofolate from dUMP and methylenetetrahydrofolate; the enzyme from Mycobacterium tuberculosis forms homotetramers; uses FAD as a cofactor YP_002536149.1 PFAM: protein of unknown function DUF1385; KEGG: gur:Gura_4062 hypothetical protein YP_002536150.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2 YP_002536151.1 TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; KEGG: gur:Gura_4060 HemK family modification methylase YP_002536152.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active YP_002536153.1 short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ YP_002536154.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer YP_002536155.1 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis YP_002536156.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide YP_002536157.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide YP_002536158.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase YP_002536159.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis YP_002536160.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA YP_002536161.1 KEGG: gur:Gura_4050 GatB/YqeY domain-containing protein YP_002536162.1 PFAM: Colicin V production protein; KEGG: gur:Gura_4049 colicin V production protein YP_002536163.1 KEGG: gur:Gura_4048 DNA primase; TIGRFAM: DNA primase; PFAM: zinc finger CHC2-family protein; TOPRIM domain protein; DNA primase catalytic core domain; SMART: Toprim sub domain protein YP_002536164.1 TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 1.1 domain protein; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: gur:Gura_4047 RpoD family RNA polymerase sigma factor YP_002536165.1 TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: gme:Gmet_3075 ExsB YP_002536166.1 similar protein in methanocaldococcus converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate as the first step in methanopterin biosynthesis YP_002536167.1 KEGG: gme:Gmet_3073 hypothetical protein YP_002536168.1 catalyzes the formation of 2-oxobutanoate from L-threonine YP_002536169.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: gur:Gura_4034 cation diffusion facilitator family transporter YP_002536170.1 KEGG: gur:Gura_4033 hypothetical protein YP_002536171.1 KEGG: gur:Gura_4032 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_002536172.1 KEGG: gur:Gura_4031 Mg chelatase, subunit ChlI YP_002536173.1 KEGG: afe:Lferr_1736 phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthase and related enzyme YP_002536174.1 TIGRFAM: DNA mismatch endonuclease Vsr; PFAM: DNA mismatch endonuclease vsr; KEGG: pzu:PHZ_c3356 DNA G:T-mismatch repair endonuclease YP_002536175.1 PFAM: excinuclease ABC subunit C; KEGG: cak:Caul_2259 hypothetical protein YP_002536176.1 TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: tbd:Tbd_1810 C-5 cytosine-specific DNA methylase YP_002536177.1 KEGG: ssv:SSU98_1260 competence protein YP_002536178.1 PFAM: Resolvase domain; KEGG: gme:Gmet_3142 resolvase-like protein YP_002536179.1 KEGG: sun:SUN_2300 hypothetical protein YP_002536182.1 KEGG: gme:Gmet_3135 hypothetical protein YP_002536183.1 PFAM: helix-turn-helix domain protein; KEGG: ppd:Ppro_1907 XRE family transcriptional regulator YP_002536185.1 PFAM: Resolvase domain; Recombinase; KEGG: gme:Gmet_3143 resolvase-like:recombinase YP_002536186.1 PFAM: magnesium chelatase ChlI subunit; KEGG: gur:Gura_4031 Mg chelatase, subunit ChlI YP_002536187.1 KEGG: gur:Gura_4339 hypothetical protein YP_002536188.1 KEGG: ppd:Ppro_0113 hypothetical protein YP_002536189.1 KEGG: cph:Cpha266_0487 hypothetical protein YP_002536190.1 KEGG: gsu:GSU3273 hypothetical protein YP_002536191.1 PFAM: Fusaric acid resistance protein conserved region; KEGG: gme:Gmet_2060 fusaric acid resistance protein region YP_002536192.1 PFAM: regulatory protein MarR; KEGG: gme:Gmet_0359 MarR family transcriptional regulator YP_002536193.1 PFAM: regulatory protein TetR; KEGG: gur:Gura_3410 TetR family transcriptional regulator YP_002536194.1 PFAM: outer membrane efflux protein; KEGG: gur:Gura_3409 outer membrane efflux protein YP_002536195.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: biotin/lipoyl attachment domain-containing protein; secretion protein HlyD family protein; KEGG: gur:Gura_3408 RND family efflux transporter MFP subunit YP_002536196.1 PFAM: protein of unknown function DUF214; KEGG: glo:Glov_0230 protein of unknown function DUF214 YP_002536197.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gur:Gura_3406 ABC transporter YP_002536198.1 KEGG: mgm:Mmc1_0089 hypothetical protein YP_002536199.1 KEGG: gur:Gura_3416 Co/Zn/Cd cation transporter-like protein YP_002536200.1 PFAM: cobalamin B12-binding domain protein; radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: gur:Gura_4335 radical SAM domain-containing protein YP_002536201.1 KEGG: gur:Gura_3377 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: PAS domain containing protein YP_002536202.1 KEGG: cte:CT0517 tia invasion determinant-related protein YP_002536203.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: gur:Gura_2407 transport-associated protein YP_002536204.1 PFAM: response regulator receiver; histidine kinase A domain protein; KEGG: gur:Gura_4030 response regulator receiver protein YP_002536205.1 PFAM: acetyl-CoA hydrolase/transferase; KEGG: gsu:GSU0490 acetyl-CoA hydrolase/transferase family protein YP_002536206.1 PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: gur:Gura_4027 response regulator receiver modulated metal dependent phosphohydrolase YP_002536207.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: gur:Gura_4026 outer membrane chaperone Skp (OmpH) YP_002536208.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gur:Gura_4025 ABC transporter YP_002536209.1 KEGG: gur:Gura_4023 hypothetical protein YP_002536210.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; Male sterility domain; KEGG: gsu:GSU0075 hypothetical protein YP_002536211.1 SMART: RNA binding S1 domain protein; KEGG: gur:Gura_4021 hypothetical protein YP_002536212.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: gur:Gura_4019 cold-shock DNA-binding domain-containing protein YP_002536213.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: gur:Gura_4018 methyl-accepting chemotaxis sensory transducer YP_002536214.1 PFAM: CoA-binding domain protein; KEGG: gur:Gura_4017 CoA-binding domain-containing protein YP_002536215.1 KEGG: gur:Gura_4013 hypothetical protein YP_002536216.1 TIGRFAM: tyrosine recombinase XerC; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: gur:Gura_4012 tyrosine recombinase XerC YP_002536217.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF362; KEGG: gur:Gura_4011 hypothetical protein YP_002536218.1 PFAM: Peptidoglycan-binding LysM; Lytic transglycosylase catalytic; KEGG: gur:Gura_4010 lytic transglycosylase, catalytic YP_002536219.1 KEGG: gur:Gura_4009 hypothetical protein YP_002536220.1 TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: gur:Gura_4008 GTP-binding protein TypA YP_002536221.1 TIGRFAM: outer membrane assembly lipoprotein YfiO; KEGG: gur:Gura_4007 DNA uptake lipoprotein-like protein YP_002536222.1 KEGG: gur:Gura_4006 hypothetical protein YP_002536223.1 KEGG: gur:Gura_4003 hypothetical protein YP_002536224.1 TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: gur:Gura_3999 succinyl-CoA synthetase, alpha subunit YP_002536225.1 catalyzes the interconversion of succinyl-CoA and succinate YP_002536226.1 KEGG: gur:Gura_3997 hypothetical protein YP_002536227.1 KEGG: gur:Gura_3996 hypothetical protein YP_002536228.1 KEGG: gur:Gura_3995 hypothetical protein YP_002536229.1 PFAM: RNA methylase; THUMP domain protein; KEGG: gur:Gura_3994 RNA methylase YP_002536230.1 PFAM: protein of unknown function DUF34; KEGG: gur:Gura_3988 hypothetical protein YP_002536231.1 PFAM: protein of unknown function DUF164; KEGG: gur:Gura_3987 hypothetical protein YP_002536232.1 KEGG: gur:Gura_3985 hypothetical protein YP_002536233.1 KEGG: gur:Gura_3984 hypothetical protein YP_002536234.1 MraZ; UPF0040; crystal structure shows similarity to AbrB YP_002536235.1 TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: gur:Gura_3982 S-adenosyl-methyltransferase MraW YP_002536236.1 TIGRFAM: cell division protein FtsL; PFAM: Septum formation initiator; KEGG: gur:Gura_3981 cell division protein FtsL YP_002536237.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PASTA domain containing protein; KEGG: gur:Gura_3980 peptidoglycan glycosyltransferase YP_002536238.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate YP_002536239.1 TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: gur:Gura_3978 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase YP_002536240.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan YP_002536241.1 TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: gur:Gura_3976 UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_002536242.1 TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: gur:Gura_3975 cell division protein FtsW YP_002536243.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis YP_002536244.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis YP_002536245.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis YP_002536246.1 KEGG: gur:Gura_3971 D-alanine--D-alanine ligase; TIGRFAM: D-alanine/D-alanine ligase; PFAM: protein of unknown function DUF201; D-alanine--D-alanine ligase domain protein; RimK domain protein ATP-grasp YP_002536247.1 PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein FtsQ-type; KEGG: gur:Gura_3970 polypeptide-transport-associated domain-containing protein YP_002536248.1 PFAM: cell division protein FtsA; KEGG: gur:Gura_3969 cell division protein FtsA YP_002536249.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function YP_002536250.1 PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: gur:Gura_3961 radical SAM domain-containing protein YP_002536251.1 KEGG: gur:Gura_2945 hypothetical protein YP_002536252.1 PFAM: ThiJ/PfpI domain protein; KEGG: gur:Gura_3959 isoprenoid biosynthesis protein YP_002536253.1 KEGG: gur:Gura_3955 ATPase; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: ATPase AAA YP_002536255.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gur:Gura_3953 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002536256.1 KEGG: gur:Gura_3952 hypothetical protein YP_002536257.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids YP_002536258.1 TIGRFAM: RNA polymerase sigma factor RpoH; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: gur:Gura_3950 RNA polymerase, sigma 32 subunit, RpoH YP_002536259.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: gur:Gura_3945 O-acetylhomoserine aminocarboxypropyltransferase YP_002536260.1 TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: gur:Gura_3944 thiamine biosynthesis protein ThiS YP_002536261.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: gur:Gura_3943 UBA/ThiF-type NAD/FAD binding protein YP_002536262.1 PFAM: Mov34/MPN/PAD-1 family protein; KEGG: gur:Gura_3942 Mov34/MPN/PAD-1 family protein YP_002536263.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: gur:Gura_3941 nitrite and sulphite reductase 4Fe-4S region YP_002536264.1 PFAM: SirA family protein; KEGG: gur:Gura_3940 redox protein regulator of disulfide bond formation-like protein YP_002536265.1 KEGG: gme:Gmet_2856 hypothetical protein YP_002536266.1 TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; Citrate transporter; Na+/H+ antiporter NhaC; KEGG: gme:Gmet_2857 sodium/sulphate symporter YP_002536267.1 KEGG: gur:Gura_3935 adenylylsulfate reductase, thioredoxin dependent; TIGRFAM: adenylylsulfate reductase, thioredoxin dependent; PFAM: phosphoadenosine phosphosulfate reductase YP_002536268.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP YP_002536269.1 KEGG: gur:Gura_3933 sulfate adenylyltransferase, large subunit; TIGRFAM: sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein YP_002536270.1 PFAM: helix-turn-helix domain protein; KEGG: gur:Gura_1328 XRE family transcriptional regulator YP_002536271.1 KEGG: gur:Gura_1327 hypothetical protein YP_002536272.1 PFAM: response regulator receiver; KEGG: gur:Gura_1326 response regulator receiver protein YP_002536273.1 KEGG: gur:Gura_3030 hypothetical protein YP_002536274.1 PFAM: transglutaminase domain protein; KEGG: gur:Gura_3992 hypothetical protein YP_002536277.1 TIGRFAM: conserved repeat domain protein; PFAM: APHP domain protein; FG-GAP repeat protein; KEGG: gur:Gura_3989 hypothetical protein YP_002536278.1 KEGG: gur:Gura_3923 type IV pilus assembly PilZ YP_002536279.1 PFAM: protein of unknown function DUF205; KEGG: gur:Gura_3922 hypothetical protein YP_002536280.1 PFAM: DoxX family protein; KEGG: gur:Gura_3921 DoxX family protein YP_002536281.1 PFAM: Rhodanese domain protein; KEGG: gur:Gura_3920 rhodanese domain-containing protein YP_002536282.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: reh:H16_A0396 threonine efflux protein YP_002536283.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: gur:Gura_1532 heavy metal translocating P-type ATPase YP_002536284.1 PFAM: protein of unknown function UPF0118; KEGG: gur:Gura_0632 hypothetical protein YP_002536285.1 PFAM: protein of unknown function UPF0118; KEGG: gur:Gura_0633 hypothetical protein YP_002536286.1 KEGG: gur:Gura_0634 hypothetical protein YP_002536287.1 PFAM: metallophosphoesterase; KEGG: gur:Gura_0635 metallophosphoesterase YP_002536288.1 PFAM: protein of unknown function UPF0153; KEGG: mxa:MXAN_6096 hypothetical protein YP_002536289.1 PFAM: penicillin-binding protein transpeptidase; KEGG: gur:Gura_0637 penicillin-binding protein, transpeptidase YP_002536290.1 PFAM: ribonuclease BN; KEGG: gur:Gura_0638 ribonuclease BN YP_002536291.1 KEGG: gur:Gura_0639 hypothetical protein YP_002536292.1 KEGG: gur:Gura_0640 hypothetical protein YP_002536293.1 KEGG: gur:Gura_0641 hypothetical protein YP_002536294.1 KEGG: gur:Gura_0642 hypothetical protein YP_002536295.1 pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient YP_002536296.1 KEGG: gur:Gura_0647 hypothetical protein YP_002536297.1 PFAM: FAD linked oxidase domain protein; KEGG: gme:Gmet_3245 FAD linked oxidase-like YP_002536298.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: gur:Gura_0649 hypothetical protein YP_002536299.1 PFAM: helix-turn-helix domain protein; cupin; KEGG: gur:Gura_0650 XRE family transcriptional regulator YP_002536300.1 PFAM: carboxyl transferase; KEGG: gur:Gura_0651 propionyl-CoA carboxylase YP_002536301.1 PFAM: biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthase L chain ATP-binding; KEGG: gur:Gura_0652 biotin/lipoyl attachment domain-containing protein YP_002536302.1 KEGG: gur:Gura_0653 hypothetical protein YP_002536303.1 KEGG: gur:Gura_0654 methylmalonyl-CoA mutase, large subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase YP_002536304.1 TIGRFAM: methylmalonyl-CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gur:Gura_0655 glyoxalase/bleomycin resistance protein/dioxygenase YP_002536305.1 KEGG: gur:Gura_0656 hypothetical protein YP_002536306.1 KEGG: gur:Gura_0657 hypothetical protein YP_002536307.1 KEGG: gur:Gura_0660 hypothetical protein YP_002536308.1 May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine YP_002536309.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis YP_002536310.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; sodium/hydrogen exchanger; KEGG: gbm:Gbem_2236 sodium/hydrogen exchanger YP_002536311.1 KEGG: gur:Gura_2021 hypothetical protein YP_002536312.1 KEGG: gur:Gura_2020 hypothetical protein YP_002536313.1 KEGG: gur:Gura_2019 nucleic acid binding, OB-fold, tRNA/helicase-type YP_002536314.1 KEGG: bxe:Bxe_B1161 hypothetical protein YP_002536315.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: gur:Gura_2018 two component, sigma-54 specific, fis family transcriptional regulator YP_002536316.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gur:Gura_2017 integral membrane sensor signal transduction histidine kinase YP_002536317.1 PFAM: protein of unknown function DUF302; KEGG: gme:Gmet_3125 hypothetical protein YP_002536318.1 KEGG: glo:Glov_0539 hypothetical protein YP_002536319.1 PFAM: outer membrane efflux protein; KEGG: gsu:GSU2137 metal ion efflux outer membrane protein family protein YP_002536320.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: gur:Gura_3361 RND family efflux transporter MFP subunit YP_002536321.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: gur:Gura_3360 CzcA family heavy metal efflux protein YP_002536322.1 KEGG: gme:Gmet_0781 extracellular solute-binding protein YP_002536323.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: gme:Gmet_0782 diguanylate cyclase/phosphodiesterase YP_002536324.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gbm:Gbem_0291 short-chain dehydrogenase/reductase SDR YP_002536325.1 KEGG: cti:RALTA_A1620 hypothetical protein YP_002536326.1 PFAM: FAD linked oxidase domain protein; KEGG: gbm:Gbem_0289 FAD linked oxidase domain protein YP_002536327.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: gbm:Gbem_0287 thiamine pyrophosphate protein TPP binding domain protein YP_002536328.1 PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: gbm:Gbem_0125 molybdopterin oxidoreductase Fe4s4 region YP_002536329.1 PFAM: Polysulphide reductase NrfD; KEGG: gbm:Gbem_0124 polysulphide reductase NrfD YP_002536330.1 KEGG: gbm:Gbem_0123 hypothetical protein YP_002536331.1 KEGG: gbm:Gbem_0122 hypothetical protein YP_002536332.1 PFAM: cytochrome c oxidase subunit I; KEGG: gbm:Gbem_0121 cytochrome c oxidase subunit I YP_002536333.1 PFAM: cytochrome C oxidase mono-heme subunit/FixO; KEGG: gbm:Gbem_0120 cytochrome c oxidase mono-heme subunit/FixO YP_002536334.1 KEGG: gbm:Gbem_0119 hypothetical protein YP_002536335.1 KEGG: gbm:Gbem_0118 hypothetical protein YP_002536336.1 KEGG: gbm:Gbem_0117 hypothetical protein YP_002536337.1 KEGG: gbm:Gbem_0116 hypothetical protein YP_002536338.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gur:Gura_4378 multi-sensor signal transduction histidine kinase YP_002536339.1 PFAM: APHP domain protein; KEGG: afw:Anae109_2325 YD repeat-containing protein YP_002536340.1 PFAM: thioesterase; KEGG: dar:Daro_0435 hypothetical protein YP_002536341.1 KEGG: gbm:Gbem_2958 FAD dependent oxidoreductase YP_002536342.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: gbm:Gbem_0114 heavy metal translocating P-type ATPase YP_002536343.1 KEGG: gbm:Gbem_0115 hypothetical protein YP_002536344.1 PFAM: nucleic acid binding OB-fold tRNA/helicase-type; KEGG: gur:Gura_0667 nucleic acid binding, OB-fold, tRNA/helicase-type YP_002536345.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; CHASE2 domain protein; KEGG: gur:Gura_0668 adenylate/guanylate cyclase YP_002536346.1 KEGG: gur:Gura_0669 hypothetical protein YP_002536347.1 PFAM: peptidase M48 Ste24p; KEGG: gur:Gura_0670 peptidase M48, Ste24p YP_002536348.1 PFAM: peptidase M48 Ste24p; KEGG: gur:Gura_0671 STE24 endopeptidase YP_002536349.1 KEGG: gur:Gura_0673 hypothetical protein YP_002536350.1 KEGG: gur:Gura_0674 hypothetical protein YP_002536351.1 TIGRFAM: general secretion pathway protein L; KEGG: gur:Gura_0675 general secretion pathway protein L YP_002536352.1 PFAM: General secretion pathway protein K; KEGG: gur:Gura_0676 general secretion pathway protein K YP_002536353.1 KEGG: gur:Gura_0677 hypothetical protein YP_002536354.1 KEGG: gur:Gura_0678 hypothetical protein YP_002536355.1 KEGG: gur:Gura_0679 hypothetical protein YP_002536356.1 TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: gur:Gura_0680 general secretion pathway protein G YP_002536357.1 TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: gur:Gura_0681 general secretion pathway protein F YP_002536358.1 KEGG: gur:Gura_0682 general secretory pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: ATPase AAA YP_002536359.1 TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: gur:Gura_0683 general secretion pathway protein D YP_002536360.1 KEGG: gur:Gura_0684 type II secretory pathway component PulC-like protein YP_002536361.1 PFAM: purine or other phosphorylase family 1; KEGG: gur:Gura_0685 purine phosphorylase family 1 YP_002536362.1 PFAM: protein of unknown function DUF191; KEGG: gur:Gura_0686 hypothetical protein YP_002536363.1 KEGG: gur:Gura_0687 PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002536364.1 TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: gur:Gura_0688 rare lipoprotein A YP_002536365.1 PFAM: hypothetical protein; hypothetical protein; SMART: hypothetical protein; KEGG: gur:Gura_0689 hypothetical protein YP_002536366.1 PFAM: heat shock protein Hsp20; KEGG: gur:Gura_0690 heat shock protein HSP20 YP_002536367.1 KEGG: gur:Gura_0691 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; ATPase AAA; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA YP_002536368.1 KEGG: gur:Gura_0692 thiamine-monophosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein YP_002536369.1 PFAM: protein of unknown function UPF0047; KEGG: gur:Gura_0693 hypothetical protein YP_002536370.1 KEGG: gur:Gura_0700 hypothetical protein YP_002536371.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: gur:Gura_0702 hypothetical protein YP_002536372.1 KEGG: gur:Gura_0703 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK YP_002536373.1 SMART: TRASH domain protein; KEGG: gur:Gura_0704 hypothetical protein YP_002536374.1 similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from methanocaldococcus janaschii shows transaldolase activity YP_002536375.1 PFAM: SNARE associated Golgi protein; KEGG: gsu:GSU2976 DedA family protein YP_002536376.1 catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine; expressed in B. subtilis under methionine starvation conditions YP_002536377.1 KEGG: gur:Gura_0709 hypothetical protein YP_002536378.1 PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: gur:Gura_0710 nitrite and sulphite reductase 4Fe-4S region YP_002536379.1 TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs YP_002536381.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gur:Gura_0712 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002536382.1 PFAM: zinc finger DksA/TraR C4-type; KEGG: gur:Gura_0715 TraR/DksA family transcriptional regulator YP_002536383.1 KEGG: gur:Gura_0716 MiaB-like tRNA modifying enzyme YliG; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme YliG; PFAM: radical SAM protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB YP_002536384.1 nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription YP_002536385.1 PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: gur:Gura_0718 outer membrane lipoprotein carrier protein LolA YP_002536386.1 PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: gur:Gura_0719 outer membrane lipoprotein carrier protein LolA YP_002536387.1 PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: gur:Gura_0721 chemotaxis protein CheA YP_002536388.1 PFAM: CheW domain protein; KEGG: gur:Gura_0723 chemotaxis protein CheW YP_002536389.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: gur:Gura_0724 methyl-accepting chemotaxis sensory transducer YP_002536390.1 PFAM: MCP methyltransferase CheR-type; KEGG: gur:Gura_0725 protein-glutamate O-methyltransferase YP_002536391.1 PFAM: type IV pilus assembly PilZ; KEGG: gur:Gura_0726 type IV pilus assembly PilZ YP_002536392.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: gur:Gura_0727 transport-associated protein YP_002536393.1 KEGG: gur:Gura_0728 hypothetical protein YP_002536394.1 PFAM: aminotransferase class I and II; KEGG: gur:Gura_0730 aminotransferase YP_002536395.1 KEGG: gur:Gura_0731 hypothetical protein YP_002536396.1 KEGG: gur:Gura_0732 hypothetical protein YP_002536397.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gur:Gura_0733 glyoxalase/bleomycin resistance protein/dioxygenase YP_002536399.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: gme:Gmet_0106 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding YP_002536400.1 PFAM: isochorismatase hydrolase; KEGG: gbm:Gbem_0508 isochorismatase hydrolase YP_002536401.1 KEGG: rpc:RPC_2035 alpha/beta hydrolase fold YP_002536402.1 KEGG: gur:Gura_0734 acetyl-CoA acetyltransferase-like protein YP_002536403.1 KEGG: gur:Gura_0735 transcriptional regulator YP_002536404.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: gur:Gura_0736 diguanylate cyclase YP_002536405.1 KEGG: gbm:Gbem_2666 glucose/sorbosone dehydrogenase-like protein YP_002536406.1 KEGG: gur:Gura_0769 hypothetical protein YP_002536407.1 KEGG: gur:Gura_0770 hypothetical protein YP_002536408.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: gur:Gura_0771 hemerythrin HHE cation binding domain-containing protein YP_002536409.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: gur:Gura_0780 cobalamin (vitamin B12) biosynthesis CbiM protein YP_002536410.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: gur:Gura_0781 Sel1 domain-containing protein YP_002536411.1 PFAM: acriflavin resistance protein; outer membrane efflux protein; KEGG: gsu:GSU2664 outer membrane efflux protein YP_002536412.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: gur:Gura_0816 RND family efflux transporter MFP subunit YP_002536413.1 PFAM: regulatory protein TetR; KEGG: gur:Gura_0817 TetR family transcriptional regulator YP_002536414.1 KEGG: gur:Gura_0818 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase YP_002536415.1 TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: gur:Gura_0819 methionyl-tRNA formyltransferase YP_002536416.1 PFAM: protein of unknown function DUF116; KEGG: gur:Gura_0820 hypothetical protein YP_002536417.1 KEGG: gur:Gura_0821 polysaccharide deacetylase YP_002536418.1 KEGG: gur:Gura_0823 hypothetical protein YP_002536419.1 KEGG: gur:Gura_0824 hypothetical protein YP_002536420.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: gbm:Gbem_2727 endonuclease/exonuclease/phosphatase YP_002536421.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: gbm:Gbem_2728 phospholipase D/transphosphatidylase YP_002536422.1 PFAM: nitroreductase; KEGG: gur:Gura_1241 nitroreductase YP_002536423.1 PFAM: FRG domain protein; KEGG: gur:Gura_1407 hypothetical protein YP_002536424.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: gbm:Gbem_2016 cytochrome bd ubiquinol oxidase subunit I YP_002536425.1 PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: gbm:Gbem_2017 cytochrome bd ubiquinol oxidase subunit II YP_002536426.1 KEGG: gur:Gura_1665 RNA-3'-phosphate cyclase; TIGRFAM: RNA 3'-phosphate cyclase; PFAM: RNA 3'-terminal phosphate cyclase; RNA 3'-terminal phosphate cyclase insert region YP_002536427.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; KEGG: eli:ELI_00360 hypothetical protein YP_002536428.1 PFAM: FAD linked oxidase domain protein; KEGG: gur:Gura_2199 FAD linked oxidase domain-containing protein YP_002536429.1 TIGRFAM: ubiquinone biosynthesis O-methyltransferase; PFAM: UbiE/COQ5 methyltransferase; methyltransferase type 11; methyltransferase type 12; KEGG: sfu:Sfum_3425 ubiquinone biosynthesis O-methyltransferase YP_002536430.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: bph:Bphy_6467 phosphoesterase PA-phosphatase related YP_002536431.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: bat:BAS3184 alcohol dehydrogenase, zinc-containing YP_002536432.1 KEGG: gur:Gura_0839 hypothetical protein YP_002536433.1 KEGG: sfu:Sfum_4081 hypothetical protein YP_002536434.1 PFAM: APHP domain protein; KEGG: afw:Anae109_2325 YD repeat-containing protein YP_002536435.1 KEGG: gur:Gura_2271 hypothetical protein YP_002536436.1 PFAM: protein of unknown function DUF1486; KEGG: bcz:pE33L466_0282 pyruvate kinase YP_002536437.1 PFAM: helix-turn-helix HxlR type; KEGG: gur:Gura_3513 HxlR family transcriptional regulator YP_002536438.1 KEGG: fre:Franean1_3066 RNA-directed DNA polymerase (reverse transcriptase) YP_002536439.1 KEGG: amc:MADE_03739 hypothetical protein YP_002536440.1 KEGG: npu:Npun_R1351 hypothetical protein YP_002536443.1 PFAM: transglutaminase domain protein; KEGG: gur:Gura_3992 hypothetical protein YP_002536448.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: pca:Pcar_0166 predicted flavin-nucleotide-binding protein YP_002536450.1 KEGG: fgenesh3_kg.C_chr_02q000073; . ; K06267 hyaluronan-mediated motility receptor (RHAMM) YP_002536451.1 KEGG: eba:ebA2196 hypothetical protein YP_002536453.1 KEGG: sgo:SGO_0191 hypothetical protein YP_002536457.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: gsu:GSU2471 group II intron, maturase YP_002536458.1 KEGG: lpl:lp_0375 hypothetical protein YP_002536460.1 KEGG: vha:VIBHAR_06877 hypothetical protein YP_002536461.1 PFAM: SEC-C motif domain protein; KEGG: dau:Daud_2080 preprotein translocase, SecA subunit YP_002536462.1 KEGG: gsu:GSU2468 hypothetical protein YP_002536463.1 TIGRFAM: mercuric reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: gur:Gura_0840 mercuric reductase YP_002536464.1 TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: gur:Gura_0841 transketolase YP_002536465.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: gur:Gura_0851 CRP/FNR family transcriptional regulator YP_002536466.1 PFAM: protein of unknown function DUF523; KEGG: gur:Gura_0852 hypothetical protein YP_002536467.1 PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gur:Gura_0853 GAF sensor signal transduction histidine kinase YP_002536468.1 PFAM: response regulator receiver; KEGG: gur:Gura_0854 response regulator receiver protein YP_002536469.1 PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: gur:Gura_0855 nucleotidyl transferase YP_002536470.1 PFAM: glycoside hydrolase family 57; KEGG: gur:Gura_0856 glycoside hydrolase family protein YP_002536471.1 TIGRFAM: galactose-1-phosphate uridylyltransferase; KEGG: gur:Gura_0857 galactose-1-phosphate uridylyltransferase YP_002536472.1 KEGG: gur:Gura_0858 glycogen/starch synthase, ADP-glucose type; TIGRFAM: glycogen/starch synthase, ADP-glucose type; PFAM: glycosyl transferase group 1; Starch synthase catalytic domain protein YP_002536473.1 KEGG: gur:Gura_0859 hypothetical protein YP_002536474.1 KEGG: gbm:Gbem_1885 hypothetical protein YP_002536475.1 TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: gbm:Gbem_1886 arginase YP_002536476.1 KEGG: gur:Gura_0861 hypothetical protein YP_002536477.1 KEGG: gur:Gura_0862 hypothetical protein YP_002536478.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gbm:Gbem_3195 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_002536479.1 PFAM: Polysulphide reductase NrfD; KEGG: gur:Gura_0864 polysulphide reductase, NrfD YP_002536480.1 PFAM: aminotransferase class V; KEGG: gur:Gura_0866 alanine--glyoxylate transaminase YP_002536481.1 KEGG: gur:Gura_0868 hypothetical protein YP_002536482.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: gur:Gura_0869 rubredoxin-type Fe(Cys)4 protein YP_002536483.1 catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP YP_002536484.1 KEGG: gur:Gura_0876 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002536485.1 KEGG: gur:Gura_0877 hypothetical protein YP_002536486.1 PFAM: helix-turn-helix domain protein; cupin; KEGG: gur:Gura_0878 cupin 2 domain-containing protein YP_002536487.1 KEGG: gur:Gura_0879 protease Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein YP_002536488.1 KEGG: gur:Gura_0880 hypothetical protein YP_002536489.1 KEGG: gur:Gura_0881 RluA family pseudouridine synthase; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase YP_002536490.1 PFAM: protein of unknown function DUF152; KEGG: gur:Gura_0882 hypothetical protein YP_002536491.1 KEGG: gur:Gura_0883 hypothetical protein YP_002536492.1 PFAM: type II secretion system protein E; GAF domain protein; General secretory system II protein E domain protein; SMART: ATPase AAA; KEGG: gbm:Gbem_0295 phytochrome sensor protein YP_002536493.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; CHASE2 domain protein; KEGG: glo:Glov_2619 adenylate/guanylate cyclase with CHASE sensor YP_002536494.1 SMART: Parallel beta-helix repeat; KEGG: dol:Dole_0363 parallel beta-helix repeat-containing protein YP_002536495.1 KEGG: KRTAP17-1; keratin associated protein 17-1 YP_002536496.1 TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; KEGG: sdn:Sden_2443 YD repeat-containing protein YP_002536498.1 KEGG: ZC123.1 YP_002536499.1 KEGG: gur:Gura_0845 hypothetical protein YP_002536501.1 PFAM: protein of unknown function DUF1568; Chromosomal replication initiator DnaA domain; KEGG: gur:Gura_3632 hypothetical protein YP_002536502.1 TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; KEGG: ppd:Ppro_0084 YD repeat-containing protein YP_002536503.1 TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; KEGG: ppd:Ppro_0084 YD repeat-containing protein YP_002536504.1 PFAM: protein of unknown function DUF1568; KEGG: gur:Gura_0845 hypothetical protein YP_002536505.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase; KEGG: gur:Gura_3352 uncharacterized peroxidase-related enzyme YP_002536506.1 PFAM: LytTr DNA-binding region; KEGG: gsu:GSU2099 sensory box protein YP_002536507.1 KEGG: gsu:GSU2098 carbon monoxide dehydrogenase subunit; TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit; PFAM: Prismane YP_002536508.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: gur:Gura_0617 CO dehydrogenase maturation factor-like protein YP_002536509.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gur:Gura_0616 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002536510.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gsu:GSU2095 NADH oxidase YP_002536511.1 TIGRFAM: cytochrome C family protein; PFAM: multihaem cytochrome; KEGG: gur:Gura_0120 cytochrome c family protein YP_002536512.1 KEGG: gme:Gmet_0105 hypothetical protein YP_002536513.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: gme:Gmet_2695 glycerate dehydrogenase YP_002536514.1 PFAM: carbon starvation protein CstA; KEGG: gme:Gmet_2696 carbon starvation protein CstA YP_002536515.1 PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: gur:Gura_2791 LytTR family two component transcriptional regulator YP_002536516.1 PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase internal region; 5TM Receptors of the LytS-YhcK type transmembrane region; KEGG: gme:Gmet_2698 histidine kinase internal region YP_002536517.1 PFAM: response regulator receiver; KEGG: gsu:GSU1289 chemotaxis protein CheY YP_002536518.1 KEGG: kra:Krad_1639 hypothetical protein YP_002536519.1 PFAM: membrane protein of unknown function; KEGG: gbm:Gbem_2195 membrane protein of unknown function YP_002536520.1 PFAM: Peptidase M23; KEGG: rru:Rru_A1660 peptidase M23B YP_002536521.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; KEGG: gsu:GSU2053 indolepyruvate ferredoxin oxidoreductase, alpha subunit YP_002536522.1 Involved in the incorporation of exogenous aryl acids in the biosynthesis of aromatic amino acids: catalysis of the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. YP_002536523.1 KEGG: gme:Gmet_0950 phenylacetate-CoA ligase YP_002536524.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: gsu:GSU2055 extracellular solute-binding protein YP_002536525.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: gsu:GSU2056 tripartite ATP-independent periplasmic transporters, DctQ component YP_002536526.1 PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: gsu:GSU2057 hypothetical protein YP_002536527.1 PFAM: sugar fermentation stimulation protein; KEGG: gur:Gura_1121 sugar fermentation stimulation protein YP_002536528.1 KEGG: scl:sce2603 hypothetical protein YP_002536529.1 PFAM: beta-lactamase; KEGG: gbm:Gbem_2426 beta-lactamase YP_002536530.1 PFAM: Peptidase M23; KEGG: gur:Gura_0954 peptidase M23B YP_002536531.1 KEGG: gur:Gura_0167 hypothetical protein YP_002536532.1 PFAM: cyclic nucleotide-binding; KEGG: abo:ABO_0537 cyclic nucleotide-binding protein YP_002536533.1 PFAM: GAF domain protein; histidine kinase HAMP region domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: gur:Gura_1756 metal dependent phosphohydrolase YP_002536534.1 KEGG: gur:Gura_1757 hypothetical protein YP_002536535.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: gur:Gura_0171 ATPase YP_002536536.1 KEGG: gur:Gura_0172 hypothetical protein YP_002536537.1 PFAM: ferrochelatase; KEGG: gur:Gura_0173 ferrochelatase YP_002536538.1 PFAM: cyclase family protein; KEGG: gur:Gura_0174 cyclase family protein YP_002536539.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: gur:Gura_0175 RluA family pseudouridine synthase YP_002536540.1 PFAM: NUDIX hydrolase; KEGG: gur:Gura_0176 NUDIX hydrolase YP_002536541.1 PFAM: protein of unknown function DUF1458; KEGG: gur:Gura_0177 hypothetical protein YP_002536542.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: gur:Gura_0178 peptidylprolyl isomerase, FKBP-type YP_002536543.1 PFAM: Rubrerythrin; KEGG: gur:Gura_0179 rubrerythrin YP_002536544.1 TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: gur:Gura_0180 alcohol dehydrogenase YP_002536545.1 KEGG: gur:Gura_0181 hypothetical protein YP_002536546.1 PFAM: SEC-C motif domain protein; KEGG: gur:Gura_0182 SecC motif-containing protein YP_002536547.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: gur:Gura_0184 NAD-dependent epimerase/dehydratase YP_002536548.1 KEGG: gur:Gura_0186 hypothetical protein YP_002536549.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: gur:Gura_0191 phospholipase D/transphosphatidylase YP_002536550.1 KEGG: gur:Gura_0192 hypothetical protein YP_002536551.1 KEGG: gbm:Gbem_3529 hypothetical protein YP_002536552.1 TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: gur:Gura_0193 sun protein YP_002536553.1 PFAM: ribulose-phosphate 3-epimerase; KEGG: gur:Gura_0194 ribulose-phosphate 3-epimerase YP_002536554.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: gur:Gura_0195 response regulator receiver modulated diguanylate cyclase YP_002536555.1 PFAM: HhH-GPD family protein; KEGG: gur:Gura_0196 HhH-GPD family protein YP_002536556.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate YP_002536557.1 TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes YP_002536558.1 KEGG: gur:Gura_0201 hypothetical protein; TIGRFAM: tol-pal system protein YbgF; PFAM: hypothetical protein; hypothetical protein; SMART: hypothetical protein YP_002536559.1 TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: gur:Gura_0202 OmpA/MotB domain-containing protein YP_002536560.1 TIGRFAM: Tol-Pal system beta propeller repeat protein TolB; PFAM: WD40 domain protein beta Propeller; KEGG: gur:Gura_0203 WD40 domain-containing protein YP_002536561.1 TIGRFAM: TonB family protein; KEGG: gur:Gura_0204 TonB family protein YP_002536562.1 TIGRFAM: protein TolR; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: gur:Gura_0205 biopolymer transport protein ExbD/TolR YP_002536563.1 TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: gur:Gura_0206 MotA/TolQ/ExbB proton channel YP_002536564.1 PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: gur:Gura_0207 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_002536565.1 KEGG: gur:Gura_0208 oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: radical SAM protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB YP_002536566.1 TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: Negative regulator of class I heat shock protein; KEGG: gur:Gura_0209 heat-inducible transcription repressor HrcA YP_002536567.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor YP_002536568.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria YP_002536569.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion YP_002536570.1 KEGG: gur:Gura_0213 phospholipase D/transphosphatidylase YP_002536571.1 PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; KEGG: gur:Gura_0214 NCAIR mutase (PurE)-related protein-like protein YP_002536572.1 PFAM: protein of unknown function DUF111; KEGG: gur:Gura_0215 hypothetical protein YP_002536573.1 PFAM: phosphatidylglycerophosphatase A; KEGG: gur:Gura_0216 phosphatidylglycerophosphatase A YP_002536574.1 TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; CinA domain protein; KEGG: gur:Gura_0217 competence/damage-inducible protein CinA YP_002536575.1 KEGG: gur:Gura_0218 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002536576.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs YP_002536577.1 TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: gur:Gura_0220 twitching motility protein YP_002536578.1 PFAM: regulatory protein RecX; KEGG: gur:Gura_0221 regulatory protein RecX YP_002536579.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_002536580.1 PFAM: cupin; KEGG: gur:Gura_0223 cupin 2 domain-containing protein YP_002536581.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gur:Gura_0224 response regulator receiver sensor signal transduction histidine kinase YP_002536582.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate YP_002536583.1 catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine YP_002536584.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation YP_002536585.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming YP_002536586.1 PFAM: NUDIX hydrolase; KEGG: gur:Gura_0229 NUDIX hydrolase YP_002536587.1 KEGG: gur:Gura_0230 hypothetical protein YP_002536588.1 catalyzes the formation of arginine from (N-L-arginino)succinate YP_002536589.1 PFAM: Fibronectin type III domain protein; KEGG: gur:Gura_0232 fibronectin, type III domain-containing protein YP_002536590.1 TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: gur:Gura_0233 diaminopimelate decarboxylase YP_002536591.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis YP_002536592.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis YP_002536593.1 PFAM: DNA polymerase beta domain protein region; KEGG: gur:Gura_0236 DNA polymerase beta subunit YP_002536594.1 PFAM: HEPN domain protein; KEGG: gur:Gura_0237 HEPN domain-containing protein YP_002536595.1 catalyzes the interconversion of tetrahydrodipicolinate and L,L-diaminopimelate in lysine biosynthesis YP_002536596.1 KEGG: bbr:BB3160 hypothetical protein YP_002536597.1 KEGG: pmr:PMI3496 hypothetical protein YP_002536598.1 KEGG: set:SEN3125 hypothetical protein YP_002536599.1 KEGG: pca:Pcar_2800 hypothetical protein YP_002536600.1 PFAM: protein of unknown function DUF1568; Chromosomal replication initiator DnaA domain; KEGG: gsu:GSU2771 hypothetical protein YP_002536602.1 KEGG: sfu:Sfum_3733 parallel beta-helix repeat YP_002536603.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: gsu:GSU0168 Fic family protein YP_002536604.1 PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: glo:Glov_3033 diaminopimelate decarboxylase YP_002536605.1 PFAM: protein of unknown function UPF0066; KEGG: gsu:GSU2411 hypothetical protein YP_002536606.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: gur:Gura_0714 prevent-host-death family protein YP_002536607.1 PFAM: PilT protein domain protein; KEGG: gur:Gura_0713 PilT domain-containing protein YP_002536609.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: aas:Aasi_0854 hypothetical protein YP_002536610.1 KEGG: mca:MCA2974 PKD domain-containing protein YP_002536611.1 PFAM: PHP domain protein; SMART: DNA polymerase X; phosphoesterase PHP domain protein; Helix-hairpin-helix DNA-binding class 1; KEGG: gur:Gura_1664 phosphotransferase domain-containing protein YP_002536612.1 PFAM: Pyridoxal-dependent decarboxylase; KEGG: gsu:GSU1707 group II decarboxylase YP_002536614.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gur:Gura_1973 GCN5-related N-acetyltransferase YP_002536615.1 PFAM: major facilitator superfamily MFS_1; KEGG: gur:Gura_0256 major facilitator transporter YP_002536616.1 PFAM: superoxide dismutase copper/zinc binding; KEGG: afw:Anae109_4070 superoxide dismutase copper/zinc binding YP_002536617.1 PFAM: DoxX family protein; KEGG: gur:Gura_3338 DoxX family protein YP_002536618.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gur:Gura_3443 glyoxalase/bleomycin resistance protein/dioxygenase YP_002536619.1 PFAM: regulatory protein TetR; KEGG: pfl:PFL_2927 TetR family transcriptional regulator YP_002536620.1 PFAM: cupin; KEGG: glo:Glov_0121 cupin 2 conserved barrel domain protein YP_002536621.1 PFAM: OmpA/MotB domain protein; 17 kDa surface antigen; KEGG: gbm:Gbem_1022 OmpA/MotB domain protein YP_002536622.1 PFAM: protein of unknown function DUF81; KEGG: gur:Gura_3512 hypothetical protein YP_002536623.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: gur:Gura_0275 pyridoxamine 5'-phosphate oxidase-related, FMN-binding YP_002536624.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: gur:Gura_0276 helix-turn-helix domain-containing protein YP_002536625.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: gvi:glr3827 probable alcohol dehydrogenase YP_002536626.1 KEGG: ppd:Ppro_0950 hypothetical protein YP_002536627.1 PFAM: thioesterase; KEGG: gbm:Gbem_2019 thioesterase YP_002536628.1 catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; involved in growth under gluconeogenic conditions and in glycolytic activity at high ATP concentrations in Corynebacterium; NAD and NADP dependent YP_002536629.1 activates fatty acids by binding to coenzyme A YP_002536630.1 PFAM: beta-lactamase domain protein; KEGG: gur:Gura_0266 beta-lactamase domain-containing protein YP_002536631.1 PFAM: PEBP family protein; KEGG: gur:Gura_0267 PEBP family protein YP_002536632.1 PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase FKBP-type; KEGG: gbm:Gbem_2004 peptidylprolyl isomerase FKBP-type YP_002536633.1 KEGG: gbm:Gbem_3866 hypothetical protein YP_002536634.1 KEGG: gur:Gura_0269 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002536635.1 catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate YP_002536636.1 PFAM: heat shock protein DnaJ domain protein; KEGG: ppd:Ppro_2917 hypothetical protein YP_002536637.1 PFAM: major facilitator superfamily MFS_1; KEGG: gur:Gura_0271 major facilitator transporter YP_002536638.1 KEGG: gur:Gura_0272 hypothetical protein YP_002536639.1 PFAM: dihydrouridine synthase DuS; KEGG: gur:Gura_0273 dihydrouridine synthase, DuS YP_002536640.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: gur:Gura_0274 peptidylprolyl isomerase, FKBP-type YP_002536642.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; KEGG: gsu:GSU2044 sensory box/GGDEF family protein YP_002536643.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: glo:Glov_2959 redoxin domain protein YP_002536644.1 KEGG: gur:Gura_2998 hypothetical protein YP_002536645.1 PFAM: protein of unknown function DUF480; KEGG: gur:Gura_0277 hypothetical protein YP_002536646.1 PFAM: NUDIX hydrolase; KEGG: gur:Gura_0279 NUDIX hydrolase YP_002536647.1 PFAM: response regulator receiver; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: aba:Acid345_2946 response regulator receiver modulated serine phosphatase YP_002536648.1 KEGG: xca:xccb100_4421 exported conserved hypothetical protein YP_002536649.1 KEGG: gme:Gmet_0126 hypothetical protein YP_002536650.1 PFAM: Protein of unknown function DUF1847; KEGG: gur:Gura_0284 hypothetical protein YP_002536651.1 TIGRFAM: 2'-5' RNA ligase; PFAM: phosphoesterase HXTX; KEGG: gur:Gura_0285 2'-5' RNA ligase YP_002536652.1 KEGG: gur:Gura_0286 poly-gamma-glutamate biosynthesis protein YP_002536653.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_002536654.1 KEGG: gur:Gura_0288 hypothetical protein YP_002536655.1 PFAM: protein of unknown function UPF0126; KEGG: gme:Gmet_0254 hypothetical protein YP_002536656.1 KEGG: gme:Gmet_1014 peptidase S1C, Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein YP_002536657.1 PFAM: Peptidoglycan-binding LysM; ErfK/YbiS/YcfS/YnhG family protein; KEGG: gme:Gmet_2980 ErfK/YbiS/YcfS/YnhG YP_002536658.1 KEGG: gur:Gura_4075 hypothetical protein YP_002536659.1 TIGRFAM: alanine dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; alanine dehydrogenase/PNT domain protein; KEGG: gme:Gmet_1099 L-alanine dehydrogenase YP_002536660.1 KEGG: noc:Noc_0978 hypothetical protein YP_002536661.1 PFAM: VacJ family lipoprotein; KEGG: pca:Pcar_1775 surface lipoprotein YP_002536662.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gur:Gura_1569 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002536663.1 KEGG: gur:Gura_2430 1A family penicillin-binding protein; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_002536664.1 KEGG: gur:Gura_1661 hypothetical protein YP_002536665.1 PFAM: alpha/beta hydrolase fold; KEGG: mem:Memar_0887 alpha/beta hydrolase fold YP_002536666.1 PFAM: thioesterase; KEGG: sfu:Sfum_2836 thioesterase YP_002536667.1 PFAM: Alkaline phosphatase; KEGG: glo:Glov_0596 alkaline phosphatase YP_002536668.1 PFAM: alpha/beta hydrolase fold; KEGG: gbm:Gbem_1023 alpha/beta hydrolase fold YP_002536669.1 TIGRFAM: YidE/YbjL duplication; PFAM: TrkA-C domain protein; YidE/YbjL duplication domain protein; KEGG: gur:Gura_3636 YidE/YbjL duplication YP_002536670.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gbm:Gbem_0138 short-chain dehydrogenase/reductase SDR YP_002536671.1 KEGG: gbm:Gbem_0130 hypothetical protein YP_002536672.1 KEGG: hypothetical protein YP_002536673.1 PFAM: protein of unknown function DUF922; KEGG: gbm:Gbem_0530 protein of unknown function DUF922 YP_002536674.1 KEGG: gdj:Gdia_0798 hypothetical protein YP_002536675.1 KEGG: ppd:Ppro_0719 hypothetical protein YP_002536676.1 KEGG: gbm:Gbem_0132 malto-oligosyltrehalose trehalohydrolase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_002536677.1 PFAM: glycoside hydrolase family 57; KEGG: gbm:Gbem_0133 glycoside hydrolase family 57 YP_002536678.1 TIGRFAM: malto-oligosyltrehalose synthase; KEGG: gbm:Gbem_0134 malto-oligosyltrehalose synthase YP_002536679.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: gbm:Gbem_0135 alpha amylase catalytic region YP_002536680.1 KEGG: gbm:Gbem_0136 trehalose synthase; TIGRFAM: trehalose synthase; trehalose synthase-fused possible maltokinase; PFAM: aminoglycoside phosphotransferase; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_002536682.1 PFAM: ATPase; KEGG: cpb:Cphamn1_0718 hypothetical protein YP_002536683.1 KEGG: gme:Gmet_0243 glycosyl transferase family protein YP_002536684.1 PFAM: glycosyl transferase family 2; KEGG: pfl:PFL_5488 glycosyl transferase, group 2 family protein YP_002536685.1 PFAM: regulatory protein TetR; KEGG: gbm:Gbem_2371 transcriptional regulator, TetR family YP_002536686.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: gsu:GSU2697 multidrug resistance protein YP_002536687.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: gme:Gmet_0810 hydrophobe/amphiphile efflux-1 HAE1 YP_002536688.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: gbm:Gbem_2367 RND efflux system, outer membrane lipoprotein, NodT family YP_002536689.1 PFAM: regulatory protein MarR; KEGG: gme:Gmet_3450 MarR family transcriptional regulator YP_002536690.1 PFAM: YceI family protein; KEGG: gme:Gmet_3449 YceI YP_002536691.1 TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes YP_002536692.1 PFAM: response regulator receiver; KEGG: gur:Gura_0290 response regulator receiver protein YP_002536693.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion YP_002536694.1 KEGG: gur:Gura_0292 poly(A) polymerase; TIGRFAM: poly(A) polymerase; PFAM: Polynucleotide adenylyltransferase region YP_002536695.1 KEGG: gur:Gura_0293 hypothetical protein YP_002536696.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gur:Gura_0294 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002536697.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: gur:Gura_0295 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_002536698.1 KEGG: gur:Gura_0297 hypothetical protein YP_002536699.1 KEGG: gur:Gura_0298 hypothetical protein YP_002536700.1 KEGG: gur:Gura_0299 hypothetical protein YP_002536701.1 PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: gur:Gura_0300 radical SAM domain-containing protein YP_002536702.1 TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; ribonuclease E and G; KEGG: gur:Gura_0301 ribonuclease YP_002536703.1 non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis YP_002536704.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: gur:Gura_0303 Rieske (2Fe-2S) domain-containing protein YP_002536705.1 PFAM: ribosomal protein L21; KEGG: gur:Gura_0304 50S ribosomal protein L21 YP_002536706.1 involved in the peptidyltransferase reaction during translation YP_002536707.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication YP_002536708.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate YP_002536709.1 PFAM: cupin; KEGG: gur:Gura_0346 cupin 2 domain-containing protein YP_002536710.1 member of metallo-beta-lactamase family; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions YP_002536711.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: gur:Gura_0344 multi-sensor signal transduction histidine kinase YP_002536712.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; CHASE3 domain protein; KEGG: npu:Npun_F3675 multi-sensor signal transduction histidine kinase YP_002536713.1 involved in start site selection during the initiation of translation YP_002536714.1 PFAM: RNA-binding S4 domain protein; KEGG: gur:Gura_0342 RNA-binding S4 domain-containing protein YP_002536715.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA YP_002536716.1 PFAM: protein of unknown function DUF748; KEGG: gme:Gmet_2829 hypothetical protein YP_002536717.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: gsu:GSU0916 methyl-accepting chemotaxis protein YP_002536718.1 TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: gur:Gura_0339 glycine cleavage system T protein YP_002536719.1 TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; KEGG: gur:Gura_0338 glycine cleavage system H protein YP_002536720.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein YP_002536721.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein YP_002536722.1 Contains selenocysteine; PFAM: Thioredoxin domain; KEGG: gur:Gura_0335 thioredoxin domain-containing protein YP_002536723.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: gur:Gura_0334 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 YP_002536724.1 NuoBCD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; subunits NuoCD, E, F, and G constitute the peripheral sector of the complex YP_002536725.1 Catalyzes the transfer of electrons from NADH to quinone YP_002536726.1 PFAM: protein of unknown function DUF488; KEGG: gur:Gura_0330 hypothetical protein YP_002536727.1 PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: gur:Gura_0329 NADH dehydrogenase (quinone) YP_002536728.1 Catalyzes the transfer of electrons from NADH to quinone YP_002536729.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: gur:Gura_0325 NADH dehydrogenase (quinone) YP_002536730.1 PFAM: Ankyrin; KEGG: gur:Gura_0324 ankyrin repeat-containing protein YP_002536731.1 Catalyzes the transfer of electrons from NADH to quinone YP_002536732.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: gur:Gura_0322 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 YP_002536733.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: gur:Gura_0321 NADH-ubiquinone oxidoreductase, chain 4L YP_002536734.1 KEGG: gur:Gura_0320 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I) YP_002536735.1 KEGG: gur:Gura_0314 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_002536736.1 KEGG: gur:Gura_0313 proton-translocating NADH-quinone oxidoreductase, chain N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_002536737.1 PFAM: ATP-binding region ATPase domain protein; glycoside hydrolase family 2 sugar binding; Diverse 7TM receptor transmembrane region; KEGG: gur:Gura_0744 integral membrane sensor signal transduction histidine kinase YP_002536738.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: gur:Gura_0745 two component LuxR family transcriptional regulator YP_002536739.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gur:Gura_0749 GCN5-related N-acetyltransferase YP_002536740.1 KEGG: sus:Acid_0146 hypothetical protein YP_002536741.1 PFAM: Tail Collar domain protein; KEGG: amr:AM1_3689 phage tail collar YP_002536742.1 PFAM: Tail Collar domain protein; KEGG: amr:AM1_3688 phage tail collar YP_002536743.1 PFAM: Tail Collar domain protein; KEGG: aba:Acid345_2455 phage tail collar YP_002536744.1 TIGRFAM: polymorphic outer membrane protein; outer membrane adhesin like proteiin; cell wall/surface repeat protein; PFAM: cell surface receptor IPT/TIG domain protein; Polymorphic membrane protein Chlamydia; Listeria/Bacterioides repeat protein; KEGG: gsu:GSU0754 fibronectin type III domain-containing protein YP_002536745.1 KEGG: gsu:GSU0753 lipoprotein YP_002536746.1 PFAM: regulatory protein MarR; KEGG: dsy:DSY3632 hypothetical protein YP_002536747.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: gur:Gura_3514 pyridoxamine 5'-phosphate oxidase-related, FMN-binding YP_002536748.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Male sterility domain; KEGG: gme:Gmet_0361 short chain dehydrogenase YP_002536749.1 PFAM: regulatory protein MarR; KEGG: glo:Glov_2891 transcriptional regulator, MarR family YP_002536750.1 PFAM: nitroreductase; KEGG: bce:BC1952 nitroreductase family protein YP_002536751.1 KEGG: gbm:Gbem_3094 hypothetical protein YP_002536752.1 PFAM: isochorismatase hydrolase; KEGG: gbm:Gbem_0521 isochorismatase hydrolase YP_002536753.1 PFAM: amidohydrolase; KEGG: gbm:Gbem_0520 amidohydrolase 3 YP_002536754.1 PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: gbm:Gbem_1410 radical SAM domain protein YP_002536755.1 TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: aminotransferase class IV; Chorismate binding-like; KEGG: gme:Gmet_3010 Para-aminobenzoate synthase, component I YP_002536756.1 KEGG: nmu:Nmul_A0617 poly-gamma-glutamate synthesis protein (capsule biosynthesis protein) YP_002536757.1 PFAM: Domain of unknown function DUF1791; KEGG: ank:AnaeK_0238 domain of unknown function DUF1791 YP_002536758.1 PFAM: regulatory protein TetR; KEGG: gme:Gmet_2645 TetR family transcriptional regulator YP_002536759.1 TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4; KEGG: gur:Gura_0358 uroporphyrin-III C-methyltransferase YP_002536760.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis YP_002536761.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins YP_002536762.1 TIGRFAM: cytochrome c-type biogenesis protein CcsB; PFAM: cytochrome c assembly protein; KEGG: gur:Gura_0361 cytochrome c assembly protein YP_002536763.1 TIGRFAM: siroheme synthase; KEGG: gur:Gura_0362 siroheme synthase YP_002536764.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: gur:Gura_0363 thioredoxin YP_002536765.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: gur:Gura_0364 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_002536766.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision YP_002536767.1 KEGG: gur:Gura_0366 chromosome segregation ATPase-like protein YP_002536768.1 PFAM: Peptidoglycan-binding LysM; hypothetical protein; KEGG: gur:Gura_0367 peptidoglycan-binding LysM YP_002536769.1 PFAM: Peptidoglycan-binding LysM; KEGG: gur:Gura_0368 hypothetical protein YP_002536770.1 KEGG: gur:Gura_0369 hypothetical protein YP_002536771.1 PFAM: helicase domain protein; DEAD/DEAH box helicase; SMART: DEAD/DEAH box helicases; KEGG: gur:Gura_0370 DEAD/DEAH box helicase domain-containing protein YP_002536772.1 PFAM: beta-lactamase domain protein; flavodoxin/nitric oxide synthase; KEGG: gur:Gura_0371 beta-lactamase domain-containing protein YP_002536773.1 KEGG: gur:Gura_0374 primosomal protein N'; TIGRFAM: primosomal protein N'; PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase; SMART: DEAD/DEAH box helicases YP_002536774.1 KEGG: gur:Gura_0377 exonuclease-like protein YP_002536775.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: gur:Gura_0378 diguanylate cyclase YP_002536776.1 KEGG: gur:Gura_0379 hypothetical protein YP_002536778.1 KEGG: gbm:Gbem_0220 hypothetical protein YP_002536779.1 PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; KEGG: gur:Gura_0393 glutamate synthase (ferredoxin) YP_002536780.1 PFAM: biotin/lipoate A/B protein ligase; KEGG: gur:Gura_0396 biotin/lipoate A/B protein ligase YP_002536781.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group YP_002536782.1 PFAM: Peptidase M23; KEGG: gur:Gura_0400 peptidase M23B YP_002536783.1 PFAM: protein of unknown function DUF309; KEGG: gur:Gura_0401 hypothetical protein YP_002536784.1 KEGG: gur:Gura_0402 hypothetical protein YP_002536785.1 PFAM: alpha/beta hydrolase fold; KEGG: gbm:Gbem_3168 alpha/beta hydrolase fold YP_002536786.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: gbm:Gbem_3169 RNA polymerase, sigma-24 subunit, ECF subfamily YP_002536788.1 PFAM: protein of unknown function DUF72; KEGG: gbm:Gbem_2325 protein of unknown function DUF72 YP_002536789.1 KEGG: gsu:GSU3359 hypothetical protein YP_002536790.1 KEGG: gsu:GSU0354 hypothetical protein YP_002536791.1 KEGG: gsu:GSU0355 hypothetical protein YP_002536792.1 KEGG: gur:Gura_0416 hypothetical protein YP_002536793.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: gsu:GSU3147 molybdopterin-guanine dinucleotide biosynthesis protein MobB YP_002536794.1 KEGG: gme:Gmet_0300 molybdopterin-guanine dinucleotide biosynthesis MobB region YP_002536795.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gbm:Gbem_4033 transcriptional regulator, LysR family YP_002536796.1 PFAM: Rhodanese domain protein; KEGG: tye:THEYE_A1167 sulfur transferase, selenocysteine-containing protein YP_002536797.1 KEGG: gur:Gura_0450 rhodanese domain-containing protein YP_002536798.1 PFAM: phosphate-selective porin O and P; KEGG: gur:Gura_0451 phosphate-selective porin O and P YP_002536799.1 KEGG: gur:Gura_0461 hypothetical protein YP_002536800.1 KEGG: gur:Gura_0446 hypothetical protein YP_002536801.1 KEGG: gur:Gura_0453 hypothetical protein YP_002536802.1 KEGG: gur:Gura_0454 hypothetical protein YP_002536803.1 KEGG: gme:Gmet_0529 methyl-accepting chemotaxis sensory transducer YP_002536804.1 KEGG: gur:Gura_0455 hypothetical protein YP_002536805.1 KEGG: gur:Gura_0456 hypothetical protein YP_002536806.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: gur:Gura_0457 Rieske (2Fe-2S) domain-containing protein YP_002536807.1 PFAM: Cytochrome b/b6 domain; KEGG: gur:Gura_0458 cytochrome b/b6 domain-containing protein YP_002536808.1 KEGG: gur:Gura_0459 hypothetical protein YP_002536809.1 KEGG: gur:Gura_0460 hypothetical protein YP_002536810.1 KEGG: gur:Gura_0429 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002536811.1 KEGG: gsu:GSU2793 hypothetical protein YP_002536812.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gur:Gura_0474 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002536813.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: gur:Gura_0477 molybdopterin oxidoreductase YP_002536814.1 KEGG: gur:Gura_0475 ABC-type phosphate transport system periplasmic component-like protein YP_002536815.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: gur:Gura_0476 methyl-accepting chemotaxis sensory transducer YP_002536816.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: glo:Glov_1239 methyl-accepting chemotaxis sensory transducer YP_002536817.1 KEGG: dau:Daud_1956 phosphate binding protein YP_002536818.1 PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: gur:Gura_0477 molybdopterin oxidoreductase YP_002536819.1 KEGG: gur:Gura_0482 hypothetical protein YP_002536820.1 KEGG: gur:Gura_0483 hypothetical protein YP_002536821.1 TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: gur:Gura_0484 CoA-substrate-specific enzyme activase YP_002536822.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: gur:Gura_0485 2-hydroxyglutaryl-CoA dehydratase, D-component YP_002536823.1 KEGG: gur:Gura_0486 hypothetical protein YP_002536824.1 converts L-glutamate to D-glutamate, a component of peptidoglycan YP_002536825.1 KEGG: gur:Gura_0488 hypothetical protein YP_002536826.1 PFAM: dihydropteroate synthase DHPS; homocysteine S-methyltransferase; methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; KEGG: gur:Gura_0489 homocysteine S-methyltransferase YP_002536827.1 KEGG: gur:Gura_0490 hypothetical protein YP_002536828.1 PFAM: Transketolase domain protein; KEGG: gur:Gura_0491 transketolase domain-containing protein YP_002536829.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: gur:Gura_0492 transketolase, central region YP_002536830.1 KEGG: gur:Gura_0493 hypothetical protein YP_002536831.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: gur:Gura_0494 integral membrane sensor signal transduction histidine kinase YP_002536832.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: gur:Gura_0495 two component, sigma-54 specific, fis family transcriptional regulator YP_002536833.1 PFAM: NHL repeat containing protein; KEGG: gur:Gura_0496 NHL repeat-containing protein YP_002536834.1 TIGRFAM: cytochrome C family protein; PFAM: multihaem cytochrome; KEGG: gur:Gura_0497 cytochrome c family protein YP_002536835.1 TIGRFAM: cytochrome C family protein; PFAM: multihaem cytochrome; KEGG: gur:Gura_0499 cytochrome c family protein YP_002536836.1 KEGG: gur:Gura_0517 hypothetical protein YP_002536837.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gur:Gura_0524 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002536838.1 KEGG: gur:Gura_0525 response regulator receiver protein YP_002536839.1 KEGG: gur:Gura_0539 hypothetical protein YP_002536840.1 KEGG: gur:Gura_0540 hypothetical protein YP_002536841.1 TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; KEGG: gur:Gura_0542 hydrogenase expression/formation protein YP_002536842.1 PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; SMART: ATPase AAA; KEGG: gur:Gura_0551 GAF sensor protein YP_002536843.1 KEGG: gur:Gura_0552 hypothetical protein YP_002536844.1 PFAM: beta-lactamase domain protein; KEGG: gur:Gura_0553 beta-lactamase domain-containing protein YP_002536845.1 PFAM: glycosyl transferase group 1; KEGG: gbm:Gbem_0333 glycosyl transferase group 1 YP_002536846.1 PFAM: protein of unknown function DUF195; KEGG: gur:Gura_0571 hypothetical protein YP_002536847.1 PFAM: alpha/beta hydrolase fold; KEGG: gur:Gura_0572 alpha/beta hydrolase fold YP_002536848.1 PFAM: type IV pilus assembly PilZ; KEGG: gur:Gura_0577 type IV pilus assembly PilZ YP_002536849.1 TIGRFAM: exodeoxyribonuclease V, alpha subunit; KEGG: gur:Gura_0578 exodeoxyribonuclease V, alpha subunit YP_002536850.1 TIGRFAM: exodeoxyribonuclease V, beta subunit; PFAM: UvrD/REP helicase; KEGG: gur:Gura_0579 exodeoxyribonuclease V, beta subunit YP_002536851.1 TIGRFAM: exodeoxyribonuclease V, gamma subunit; PFAM: Exodeoxyribonuclease V RecC subunit; KEGG: gur:Gura_0582 exodeoxyribonuclease V, gamma subunit YP_002536852.1 KEGG: gur:Gura_0583 homoserine O-acetyltransferase; TIGRFAM: homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold YP_002536853.1 KEGG: gbm:Gbem_0350 hypothetical protein YP_002536854.1 PFAM: conserved hypothetical protein; KEGG: gur:Gura_0608 hypothetical protein YP_002536855.1 KEGG: gur:Gura_0609 pyridoxamine 5'-phosphate oxidase-related, FMN-binding YP_002536856.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine YP_002536857.1 PFAM: Appr-1-p processing domain protein; KEGG: gur:Gura_0611 appr-1-p processing domain-containing protein YP_002536858.1 KEGG: gur:Gura_3914 apurinic endonuclease Apn1; TIGRFAM: apurinic endonuclease Apn1; PFAM: Xylose isomerase domain protein TIM barrel; SMART: AP endonuclease family 2 YP_002536859.1 PFAM: histidine triad (HIT) protein; KEGG: gur:Gura_3912 histidine triad (HIT) protein YP_002536860.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate YP_002536861.1 KEGG: gur:Gura_3910 hypothetical protein YP_002536862.1 KEGG: gur:Gura_3909 hypothetical protein YP_002536863.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: gur:Gura_3908 BadM/Rrf2 family transcriptional regulator YP_002536864.1 TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: gur:Gura_3907 cysteine synthase A YP_002536865.1 KEGG: gur:Gura_3906 PP-loop domain-containing protein YP_002536866.1 PFAM: heat shock protein Hsp20; KEGG: gur:Gura_3905 heat shock protein HSP20 YP_002536867.1 KEGG: gur:Gura_3904 hypothetical protein YP_002536868.1 KEGG: gur:Gura_3903 hypothetical protein YP_002536869.1 KEGG: gur:Gura_3902 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: Helix-hairpin-helix domain protein class 2 YP_002536870.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: gur:Gura_3901 diguanylate cyclase YP_002536871.1 PFAM: type IV pilus assembly PilZ; KEGG: gme:Gmet_0114 hypothetical protein YP_002536872.1 PFAM: OmpA/MotB domain protein; KEGG: gur:Gura_3897 OmpA/MotB domain-containing protein YP_002536873.1 PFAM: Smr protein/MutS2; KEGG: gur:Gura_3896 Smr protein/MutS2 YP_002536874.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: gur:Gura_3858 cystathionine gamma-synthase YP_002536875.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: gur:Gura_3857 cystathionine gamma-synthase YP_002536876.1 KEGG: gsu:GSU0774 iron-sulfur cluster-binding protein YP_002536877.1 PFAM: acyltransferase 3; KEGG: mxa:MXAN_7325 acyltransferase family protein YP_002536878.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine YP_002536879.1 TIGRFAM: thiamine-phosphate pyrophosphorylase; phosphomethylpyrimidine kinase; PFAM: protein of unknown function UPF0031; thiamine monophosphate synthase; phosphomethylpyrimidine kinase type-1; KEGG: gur:Gura_3851 phosphomethylpyrimidine kinase YP_002536880.1 KEGG: gur:Gura_3850 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein YP_002536881.1 Contains selenocysteine; TIGRFAM: selenide, water dikinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: gsu:GSU0607 selenide, water dikinase, selenocysteine-containing YP_002536882.1 KEGG: gur:Gura_3848 hypothetical protein YP_002536883.1 involved in de novo purine biosynthesis YP_002536884.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis YP_002536885.1 PFAM: Oligosaccharyl transferase STT3 subunit; KEGG: mma:MM_2210 oligosaccharyl transferase YP_002536886.1 KEGG: gur:Gura_3844 phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase YP_002536887.1 KEGG: gur:Gura_3843 hypothetical protein YP_002536888.1 PFAM: ResB family protein; KEGG: gur:Gura_3842 ResB family protein YP_002536889.1 TIGRFAM: cytochrome c-type biogenesis protein CcsB; PFAM: cytochrome c assembly protein; KEGG: gur:Gura_3841 cytochrome c assembly protein YP_002536890.1 TIGRFAM: cytochrome C family protein; PFAM: multihaem cytochrome; KEGG: gur:Gura_3840 cytochrome c family protein YP_002536891.1 TIGRFAM: cytochrome C family protein; PFAM: multihaem cytochrome; KEGG: gur:Gura_3839 cytochrome c family protein YP_002536892.1 PFAM: NHL repeat containing protein; KEGG: gur:Gura_3838 NHL repeat-containing protein YP_002536893.1 KEGG: gur:Gura_3837 hypothetical protein YP_002536894.1 KEGG: gur:Gura_3836 hypothetical protein YP_002536895.1 KEGG: gur:Gura_3835 hypothetical protein YP_002536896.1 PFAM: glycosyl transferase family 2; KEGG: gur:Gura_3834 glycosyl transferase family protein YP_002536897.1 PFAM: glycosyl transferase group 1; KEGG: gur:Gura_3833 glycosyl transferase, group 1 YP_002536898.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; PFAM: NHL repeat containing protein; KEGG: gur:Gura_3832 YVTN beta-propeller repeat-containing protein YP_002536899.1 PFAM: adenylylsulfate kinase; KEGG: gur:Gura_3831 adenylyl-sulfate kinase YP_002536900.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP YP_002536901.1 PFAM: S23 ribosomal protein; KEGG: gur:Gura_3829 S23 ribosomal protein YP_002536902.1 TIGRFAM: small GTP-binding protein; sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor GTP-binding; KEGG: gur:Gura_3828 sulfate adenylyltransferase, large subunit YP_002536903.1 PFAM: ABC transporter; KEGG: gur:Gura_3817 ABC transporter YP_002536904.1 PFAM: CopG family transcriptional regulator; KEGG: ppd:Ppro_3842 CopG family transcriptional regulator YP_002536905.1 TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: gur:Gura_2718 addiction module antitoxin YP_002536906.1 KEGG: gur:Gura_3822 hypothetical protein YP_002536907.1 PFAM: radical SAM protein; KEGG: cbh:CLC_2585 hypothetical protein YP_002536908.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gur:Gura_3813 ABC transporter YP_002536909.1 KEGG: hypothetical protein ; K01021 protein-tyrosine sulfotransferase YP_002536910.1 KEGG: cau:Caur_3763 glycosyl transferase family protein YP_002536911.1 KEGG: pae:PA1392 hypothetical protein YP_002536912.1 PFAM: glycosyl transferase family 2; KEGG: chu:CHU_0912 b-glycosyltransferase YP_002536913.1 KEGG: predicted protein YP_002536914.1 PFAM: glycosyl transferase family 2; KEGG: rfe:RF_0543 glycosyltransferase YP_002536915.1 PFAM: glycosyl transferase family 2; KEGG: mtp:Mthe_0961 glycosyl transferase family protein YP_002536916.1 PFAM: glycosyl transferase family 2; KEGG: rfe:RF_0543 glycosyltransferase YP_002536917.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: swo:Swol_0727 carbohydrate oxidoreductase YP_002536918.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; Polysaccharide biosynthesis domain protein; KEGG: gsu:GSU2246 polysaccharide biosynthesis domain-containing protein YP_002536919.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: bfs:BF1910 LPS biosynthesis related epimerase YP_002536920.1 KEGG: mes:Meso_3695 methyltransferase type 12 YP_002536921.1 PFAM: glycosyl transferase group 1; KEGG: mes:Meso_3696 glycosyl transferase, group 1 YP_002536922.1 KEGG: cpr:CPR_0256 teichuronic acid biosynthesis glycosyl transferase YP_002536923.1 KEGG: cac:CAC3066 glycosyltransferase YP_002536924.1 KEGG: efa:EF2196 glycosyl transferase, group 2 family protein YP_002536925.1 PFAM: glycosyl transferase family 2; KEGG: tbd:Tbd_1875 glycosyl transferase, group 2 family protein YP_002536926.1 PFAM: glycosyl transferase family 2; KEGG: afw:Anae109_1822 glycosyl transferase family protein YP_002536927.1 PFAM: hypothetical protein; hypothetical protein; SMART: hypothetical protein; KEGG: gur:Gura_3794 hypothetical protein YP_002536928.1 PFAM: glycosyl transferase family 2; KEGG: gur:Gura_3793 glycosyl transferase family protein YP_002536929.1 KEGG: gur:Gura_3792 hypothetical protein YP_002536930.1 PFAM: regulatory protein MarR; KEGG: gur:Gura_3791 regulatory protein, MarR YP_002536931.1 TIGRFAM: methyltransferase FkbM family; KEGG: ava:Ava_3684 methyltransferase FkbM YP_002536932.1 PFAM: polysaccharide biosynthesis protein; KEGG: pdi:BDI_0558 exopolysaccharide biosynthesis protein YP_002536933.1 KEGG: swo:Swol_0622 transferase YP_002536934.1 PFAM: protein of unknown function DUF268 Caenorhabditis species; KEGG: glo:Glov_2749 protein of unknown function DUF268 YP_002536935.1 KEGG: cac:CAC2177 hypothetical protein YP_002536936.1 PFAM: glycosyl transferase family 2; KEGG: lbj:LBJ_1155 glycosyltransferase YP_002536937.1 PFAM: glycosyl transferase family 2; KEGG: ter:Tery_2856 glycosyl transferase family protein YP_002536938.1 PFAM: glycosyl transferase group 1; KEGG: gbm:Gbem_3439 glycosyl transferase group 1 YP_002536939.1 KEGG: gur:Gura_3775 hypothetical protein YP_002536940.1 PFAM: RNA methylase; methyltransferase small; KEGG: gur:Gura_3774 methyltransferase small YP_002536941.1 PFAM: glycosyl transferase family 2; KEGG: gur:Gura_1323 glycosyl transferase family protein YP_002536942.1 PFAM: protein of unknown function DUF721; KEGG: gur:Gura_3768 hypothetical protein YP_002536943.1 KEGG: gur:Gura_3767 hypothetical protein YP_002536944.1 KEGG: gur:Gura_3766 hypothetical protein YP_002536945.1 KEGG: gur:Gura_3765 SirA family protein YP_002536946.1 KEGG: gur:Gura_3764 signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: ATPase AAA YP_002536947.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity YP_002536948.1 KEGG: gur:Gura_3762 KH domain-containing protein YP_002536949.1 TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein; KEGG: gur:Gura_3761 16S rRNA processing protein RimM YP_002536950.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA YP_002536951.1 KEGG: gur:Gura_3759 hypothetical protein YP_002536952.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site YP_002536953.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids YP_002536954.1 PFAM: protein of unknown function UPF0102; KEGG: gur:Gura_3756 hypothetical protein YP_002536955.1 PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: gur:Gura_3755 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_002536956.1 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers YP_002536957.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: gur:Gura_3753 uroporphyrin-III C/tetrapyrrole methyltransferase YP_002536958.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family YP_002536959.1 PFAM: radical SAM protein; KEGG: gur:Gura_3751 radical SAM domain-containing protein YP_002536960.1 KEGG: gur:Gura_3748 hypothetical protein YP_002536961.1 KEGG: gur:Gura_3747 hypothetical protein YP_002536962.1 KEGG: gur:Gura_3712 hypothetical protein YP_002536963.1 KEGG: gur:Gura_3713 hypothetical protein YP_002536964.1 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis YP_002536965.1 KEGG: gur:Gura_3716 CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase YP_002536966.1 catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine YP_002536967.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis YP_002536968.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit YP_002536969.1 TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: gur:Gura_3720 acetolactate synthase, large subunit, biosynthetic type YP_002536970.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis YP_002536971.1 KEGG: gur:Gura_3722 hypothetical protein YP_002536972.1 PFAM: Fibronectin type III domain protein; KEGG: gur:Gura_3723 fibronectin, type III domain-containing protein YP_002536973.1 TIGRFAM: cytochrome C family protein; PFAM: multihaem cytochrome; KEGG: gur:Gura_3724 cytochrome c family protein YP_002536974.1 PFAM: peptidase M22 glycoprotease; KEGG: gur:Gura_3725 peptidase M22, glycoprotease YP_002536975.1 KEGG: gur:Gura_3726 membrane-associated zinc metalloprotease; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein YP_002536976.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate YP_002536977.1 PFAM: phosphatidate cytidylyltransferase; KEGG: gbm:Gbem_2751 phosphatidate cytidylyltransferase YP_002536978.1 catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate YP_002536979.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs YP_002536980.1 Catalyzes the phosphorylation of UMP to UDP YP_002536981.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu YP_002536982.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit YP_002536983.1 PFAM: permease YjgP/YjgQ family protein; KEGG: gur:Gura_3734 permease YjgP/YjgQ family protein YP_002536984.1 PFAM: permease YjgP/YjgQ family protein; KEGG: gur:Gura_3735 permease YjgP/YjgQ family protein YP_002536985.1 KEGG: gur:Gura_3736 hypothetical protein YP_002536986.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gur:Gura_3737 glyoxalase/bleomycin resistance protein/dioxygenase YP_002536987.1 PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: gur:Gura_3738 cytochrome c biogenesis protein, transmembrane region YP_002536988.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: gur:Gura_3739 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_002536989.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: gur:Gura_3740 two component, sigma-54 specific, fis family transcriptional regulator YP_002536990.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gur:Gura_3741 integral membrane sensor signal transduction histidine kinase YP_002536991.1 KEGG: gur:Gura_3742 hypothetical protein YP_002536992.1 PFAM: Polyprenyl synthetase; KEGG: gur:Gura_3743 polyprenyl synthetase YP_002536993.1 PFAM: response regulator receiver; GAF domain protein; KEGG: gur:Gura_3744 GAF sensor protein YP_002536994.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: gur:Gura_3745 diguanylate cyclase YP_002536995.1 PFAM: helix-turn-helix domain protein; peptidase S24 and S26 domain protein; KEGG: gur:Gura_3746 prophage repressor YP_002536996.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: gur:Gura_3711 cold-shock DNA-binding domain-containing protein YP_002536997.1 PFAM: conserved hypothetical protein; KEGG: gur:Gura_3710 hypothetical protein YP_002536998.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis YP_002536999.1 PFAM: aconitate hydratase domain protein; KEGG: gur:Gura_3708 aconitate hydratase domain-containing protein YP_002537000.1 KEGG: gur:Gura_3707 hypothetical protein YP_002537001.1 PFAM: protein of unknown function DUF140; KEGG: gur:Gura_3706 hypothetical protein YP_002537002.1 PFAM: Mammalian cell entry related domain protein; KEGG: gur:Gura_3705 hypothetical protein YP_002537003.1 KEGG: gur:Gura_3702 membrane protein-like protein YP_002537004.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: gur:Gura_3701 peptidase U62, modulator of DNA gyrase YP_002537005.1 KEGG: gur:Gura_3700 hypothetical protein YP_002537006.1 PFAM: polysaccharide deacetylase; KEGG: gur:Gura_3699 polysaccharide deacetylase YP_002537007.1 KEGG: gbm:Gbem_1491 ABC-type phosphate transport system periplasmic component-like protein YP_002537008.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: gur:Gura_3698 hypothetical protein YP_002537009.1 PFAM: formyl transferase domain protein; KEGG: gur:Gura_3697 hypothetical protein YP_002537010.1 PFAM: glycosyl transferase family 2; KEGG: gur:Gura_3696 glycosyl transferase family protein YP_002537011.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: gme:Gmet_0886 DegT/DnrJ/EryC1/StrS aminotransferase YP_002537012.1 PFAM: glycosyl transferase family 39; KEGG: gur:Gura_3694 glycosyl transferase family protein YP_002537013.1 PFAM: peptidase U32; KEGG: gur:Gura_3693 peptidase U32 YP_002537014.1 TIGRFAM: tol-pal system protein YbgF; SMART: hypothetical protein; KEGG: gur:Gura_3692 tetratricopeptide domain-containing protein YP_002537015.1 PFAM: Peptidoglycan-binding LysM; KEGG: gur:Gura_3691 peptidoglycan-binding LysM YP_002537016.1 TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: gur:Gura_3690 DNA protecting protein DprA YP_002537017.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining; maintains net negative superhelicity YP_002537018.1 KEGG: gsu:GSU0826 hypothetical protein YP_002537019.1 KEGG: gbm:Gbem_3370 hypothetical protein YP_002537020.1 TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine YP_002537021.1 KEGG: gur:Gura_3687 hypothetical protein YP_002537022.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell YP_002537023.1 PFAM: alanine racemase domain protein; KEGG: gur:Gura_3685 alanine racemase domain-containing protein YP_002537024.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis YP_002537025.1 KEGG: gur:Gura_3682 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase YP_002537026.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response YP_002537027.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation YP_002537028.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1 YP_002537030.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21 YP_002537031.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit YP_002537032.1 KEGG: gur:Gura_3676 hypothetical protein YP_002537033.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk YP_002537034.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases YP_002537035.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA YP_002537036.1 glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA YP_002537037.1 catalyzes the formation of phosphoenolpyruvate from pyruvate YP_002537038.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: gur:Gura_3670 cold-shock DNA-binding domain-containing protein YP_002537039.1 KEGG: gur:Gura_3669 hypothetical protein YP_002537040.1 KEGG: ppd:Ppro_2989 radical SAM domain-containing protein YP_002537041.1 PFAM: protein of unknown function DUF327; KEGG: gur:Gura_3667 hypothetical protein YP_002537042.1 KEGG: sfu:Sfum_3494 hypothetical protein YP_002537043.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: gur:Gura_3666 5-carboxymethyl-2-hydroxymuconate delta-isomerase YP_002537044.1 KEGG: gur:Gura_3661 radical SAM protein; TIGRFAM: conserved hypothetical protein; PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB YP_002537045.1 KEGG: gur:Gura_3660 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase YP_002537046.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate YP_002537047.1 TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: gur:Gura_3658 thiamine biosynthesis protein ThiS YP_002537048.1 KEGG: gur:Gura_3657 hypothetical protein YP_002537049.1 KEGG: gur:Gura_3656 histidine kinase YP_002537050.1 KEGG: gur:Gura_3655 hypothetical protein YP_002537051.1 PFAM: Polysulphide reductase NrfD; KEGG: gur:Gura_3654 polysulphide reductase-like protein YP_002537052.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gur:Gura_3653 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002537053.1 KEGG: gur:Gura_3652 hypothetical protein YP_002537054.1 KEGG: gur:Gura_3651 hypothetical protein YP_002537055.1 KEGG: gur:Gura_3650 hypothetical protein YP_002537056.1 PFAM: response regulator receiver; KEGG: gur:Gura_3649 response regulator receiver protein YP_002537057.1 KEGG: gur:Gura_3648 hypothetical protein YP_002537059.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: gur:Gura_3647 two component, sigma-54 specific, fis family transcriptional regulator YP_002537060.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: gur:Gura_3646 integral membrane sensor signal transduction histidine kinase YP_002537061.1 PFAM: UspA domain protein; KEGG: gur:Gura_3645 UspA domain-containing protein YP_002537062.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: gur:Gura_3644 regulatory protein, IclR YP_002537063.1 KEGG: gur:Gura_3643 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase YP_002537064.1 PFAM: protein of unknown function DUF342; KEGG: gur:Gura_3642 hypothetical protein YP_002537065.1 KEGG: gur:Gura_3641 leucyl aminopeptidase (aminopeptidase T)-like protein YP_002537066.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: gur:Gura_3640 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_002537067.1 PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; 4Fe-4S ferredoxin, iron-sulphur binding, conserved site; KEGG: gur:Gura_3639 molybdopterin oxidoreductase YP_002537068.1 PFAM: DTW domain containing protein; KEGG: gme:Gmet_0179 DTW YP_002537069.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: gur:Gura_3621 hypothetical protein YP_002537070.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: npu:Npun_F3675 multi-sensor signal transduction histidine kinase YP_002537071.1 PFAM: OmpA/MotB domain protein; KEGG: gur:Gura_4333 OmpA/MotB domain-containing protein YP_002537072.1 KEGG: gur:Gura_4377 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002537073.1 KEGG: gur:Gura_4378 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein YP_002537074.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: gme:Gmet_0805 flavin reductase-like, FMN-binding YP_002537075.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: sul:SYO3AOP1_0200 4-oxalocrotonate tautomerase family enzyme YP_002537076.1 catalyzes the reduction of hydroxylamine to ammonia and water YP_002537077.1 PFAM: NHL repeat containing protein; Kelch repeat-containing protein; Kelch repeat protein; KEGG: mxa:MXAN_1763 kelch domain protein YP_002537078.1 PFAM: beta-lactamase domain protein; KEGG: gur:Gura_3400 beta-lactamase domain-containing protein YP_002537079.1 PFAM: protein of unknown function DUF1573; KEGG: gur:Gura_3399 hypothetical protein YP_002537080.1 KEGG: gur:Gura_3398 hypoxanthine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_002537081.1 TIGRFAM: MJ0042 family finger-like protein; KEGG: gur:Gura_3397 zinc finger-domain-containing protein YP_002537082.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gbm:Gbem_2278 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_002537083.1 AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA YP_002537084.1 KEGG: gur:Gura_3395 phosphate acetyltransferase; TIGRFAM: phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase YP_002537085.1 TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: gur:Gura_3540 molybdenum cofactor biosynthesis protein C YP_002537086.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: gur:Gura_3393 molybdenum cofactor synthesis domain-containing protein YP_002537087.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gme:Gmet_1039 ABC transporter-related protein YP_002537088.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gsu:GSU2701 ABC transporter, permease protein YP_002537089.1 KEGG: gbm:Gbem_2272 molybdenum cofactor biosynthesis protein A; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: radical SAM protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB YP_002537090.1 PFAM: MOSC domain containing protein; KEGG: gme:Gmet_0302 MOSC YP_002537091.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: gur:Gura_3392 integral membrane sensor signal transduction histidine kinase YP_002537092.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: gur:Gura_3391 two component, sigma-54 specific, fis family transcriptional regulator YP_002537093.1 Contains selenocysteine; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: gme:Gmet_1059 formate dehydrogenase alpha subunit YP_002537094.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gur:Gura_3387 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002537095.1 PFAM: Polysulphide reductase NrfD; KEGG: gur:Gura_3386 polysulphide reductase, NrfD YP_002537096.1 KEGG: gur:Gura_3370 formate dehydrogenase family accessory protein FdhD YP_002537097.1 TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes YP_002537098.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: gur:Gura_3010 peptidase S8 and S53, subtilisin, kexin, sedolisin YP_002537099.1 KEGG: gbm:Gbem_0145 hypothetical protein YP_002537100.1 TIGRFAM: mobile mystery protein B; PFAM: filamentation induced by cAMP protein Fic; KEGG: glo:Glov_3534 mobile mystery protein B YP_002537101.1 TIGRFAM: mobile mystery protein A; PFAM: helix-turn-helix domain protein; KEGG: glo:Glov_3533 transcriptional regulator, XRE family YP_002537102.1 Contains selenocysteine; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: gur:Gura_3374 formate dehydrogenase, alpha subunit YP_002537103.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Formate dehydrogenase transmembrane domain protein; KEGG: gur:Gura_3373 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002537104.1 TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: gur:Gura_3372 formate dehydrogenase, gamma subunit YP_002537105.1 PFAM: formate dehydrogenase accessory protein; KEGG: gur:Gura_3371 hypothetical protein YP_002537106.1 KEGG: gsu:GSU0780 formate dehydrogenase accessory protein FdhD YP_002537107.1 KEGG: gur:Gura_0621 hypothetical protein YP_002537108.1 TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: gme:Gmet_2076 formate dehydrogenase, subunit FdhD YP_002537109.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: gur:Gura_3895 BadM/Rrf2 family transcriptional regulator YP_002537110.1 TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: gur:Gura_3894 sulfate ABC transporter, periplasmic sulfate-binding protein YP_002537111.1 TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gur:Gura_3893 sulfate ABC transporter, inner membrane subunit CysT YP_002537112.1 TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gur:Gura_3892 sulfate ABC transporter, inner membrane subunit CysW YP_002537113.1 KEGG: gur:Gura_3891 sulfate ABC transporter, ATPase subunit; TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter; SMART: ATPase AAA YP_002537114.1 KEGG: gur:Gura_3890 hypothetical protein YP_002537115.1 PFAM: S-adenosylmethionine synthetase; KEGG: gbm:Gbem_1725 S-adenosylmethionine synthetase YP_002537116.1 KEGG: gbm:Gbem_1727 hypothetical protein YP_002537117.1 KEGG: gbm:Gbem_1726 hypothetical protein YP_002537118.1 KEGG: atc:AGR_pTi_119 sulfonate binding protein precursor; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: NMT1/THI5 like domain protein; SMART: extracellular solute-binding protein family 3 YP_002537119.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_pTi_116 aliphatic sulfonates transport permease protein SsuC YP_002537120.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gur:Gura_3882 ABC transporter YP_002537121.1 PFAM: cobalamin B12-binding domain protein; radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mka:MK0992 Fe-S oxidoreductase YP_002537122.1 KEGG: gbm:Gbem_1670 hypothetical protein YP_002537123.1 PFAM: conserved hypothetical protein; KEGG: gbm:Gbem_3179 hypothetical protein YP_002537124.1 PFAM: Rhomboid family protein; KEGG: gur:Gura_0967 rhomboid family protein YP_002537125.1 PFAM: phosphoglucose isomerase (PGI); KEGG: nmu:Nmul_A0469 glucose-6-phosphate isomerase YP_002537126.1 PFAM: tRNA pseudouridine synthase D TruD; KEGG: gur:Gura_0971 tRNA pseudouridine synthase D, TruD YP_002537127.1 KEGG: gur:Gura_0972 hypothetical protein YP_002537128.1 PFAM: Na+/solute symporter; KEGG: gur:Gura_0973 Na+/solute symporter YP_002537129.1 PFAM: protein of unknown function DUF294 nucleotidyltransferase KEGG: gur:Gura_0974 protein of unknown function DUF294, nucleotidyltransferase YP_002537130.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: gur:Gura_0975 xylose isomerase domain-containing protein YP_002537131.1 PFAM: polysaccharide deacetylase; KEGG: gur:Gura_0976 polysaccharide deacetylase YP_002537132.1 PFAM: protein of unknown function DUF559; KEGG: cte:CT1729 DNA methylase YP_002537133.1 KEGG: gur:Gura_0979 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent YP_002537134.1 PFAM: helix-turn-helix domain protein; cupin; KEGG: gur:Gura_0980 XRE family transcriptional regulator YP_002537135.1 PFAM: Saccharopine dehydrogenase; KEGG: glo:Glov_1676 saccharopine dehydrogenase YP_002537136.1 TIGRFAM: carboxynorspermidine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: gsu:GSU2538 carboxynorspermidine decarboxylase YP_002537137.1 catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis YP_002537138.1 PFAM: major facilitator superfamily MFS_1; KEGG: gur:Gura_0984 major facilitator transporter YP_002537139.1 KEGG: gur:Gura_0987 hypothetical protein YP_002537140.1 KEGG: gur:Gura_0988 hypothetical protein YP_002537141.1 KEGG: gur:Gura_0989 hypothetical protein YP_002537142.1 KEGG: gur:Gura_0990 hypothetical protein YP_002537143.1 KEGG: gur:Gura_0991 hypothetical protein YP_002537144.1 KEGG: gur:Gura_0992 hypothetical protein YP_002537145.1 KEGG: gsu:GSU2737 polyheme membrane-associated cytochrome c YP_002537146.1 KEGG: gur:Gura_0995 hypothetical protein YP_002537147.1 PFAM: O-methyltransferase family 3; KEGG: gme:Gmet_2978 O-methyltransferase family protein YP_002537148.1 TIGRFAM: DNA-3-methyladenine glycosylase; PFAM: methylpurine-DNA glycosylase (MPG); KEGG: mlo:mll4583 3-methyl-adenine DNA glycosylase YP_002537149.1 KEGG: gbm:Gbem_1584 hypothetical protein YP_002537150.1 PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: gbm:Gbem_1583 aminotransferase class V YP_002537151.1 TIGRFAM: methyltransferase; KEGG: gbm:Gbem_1582 hypothetical protein YP_002537152.1 KEGG: gbm:Gbem_1581 hypothetical protein YP_002537153.1 KEGG: gur:Gura_3334 hypothetical protein YP_002537154.1 PFAM: FecR protein; KEGG: glo:Glov_2621 hypothetical protein YP_002537155.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: glo:Glov_2622 hypothetical protein YP_002537156.1 KEGG: gur:Gura_0884 hypothetical protein YP_002537157.1 KEGG: gur:Gura_0885 hypothetical protein YP_002537158.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: gur:Gura_0886 NADH ubiquinone oxidoreductase, 20 kDa subunit YP_002537159.1 PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: gur:Gura_0888 NADH-ubiquinone oxidoreductase, chain 49kDa YP_002537160.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: gur:Gura_0889 NADH dehydrogenase (quinone) YP_002537161.1 KEGG: gur:Gura_0890 hydrogenase 4 membrane component (E)-like protein YP_002537162.1 KEGG: gur:Gura_0891 formate hydrogenlyase subunit 4-like protein YP_002537163.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: gur:Gura_0892 NADH dehydrogenase (quinone) YP_002537164.1 TIGRFAM: DNA binding domain protein, excisionase family; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: gur:Gura_0893 PTS IIA-like nitrogen-regulatory protein PtsN YP_002537166.1 PFAM: Integral membrane protein TerC; KEGG: gur:Gura_0899 integral membrane protein TerC YP_002537167.1 TIGRFAM: small GTP-binding protein; GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: gur:Gura_0905 small GTP-binding protein YP_002537168.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gur:Gura_0906 short-chain dehydrogenase/reductase SDR YP_002537169.1 PFAM: GAF domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: gur:Gura_0907 metal dependent phosphohydrolase YP_002537170.1 KEGG: gur:Gura_0908 hypothetical protein YP_002537171.1 KEGG: gur:Gura_0909 hypothetical protein YP_002537172.1 KEGG: gur:Gura_0910 hypothetical protein YP_002537173.1 KEGG: gbm:Gbem_3608 hypothetical protein YP_002537174.1 PFAM: response regulator receiver; KEGG: gur:Gura_0911 response regulator receiver protein YP_002537175.1 TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: gsu:GSU3088 YbaK/EbsC protein YP_002537176.1 PFAM: Silent information regulator protein Sir2; KEGG: gur:Gura_0913 silent information regulator protein Sir2 YP_002537177.1 TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; KEGG: gur:Gura_0914 nifR3 family TIM-barrel protein YP_002537178.1 KEGG: gur:Gura_0915 signal transduction histidine kinase, nitrogen specific, NtrB; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002537179.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: ATPase AAA; KEGG: gur:Gura_0916 two component, sigma-54 specific, fis family transcriptional regulator YP_002537180.1 PFAM: isochorismatase hydrolase; KEGG: gur:Gura_0917 isochorismatase hydrolase YP_002537181.1 PFAM: helix-turn-helix domain protein; KEGG: sat:SYN_02733 helix-turn-helix DNA binding protein YP_002537182.1 TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein; KEGG: sat:SYN_02732 protein HipA YP_002537183.1 KEGG: gsu:GSU3137 cytochrome c family protein YP_002537184.1 PFAM: proteinase inhibitor I1 Kazal; KEGG: scl:sce2670 hypothetical protein YP_002537185.1 PFAM: Pathogenesis-related transcriptional factor and ERF protein; KEGG: bvi:Bcep1808_6711 restriction endonuclease YP_002537186.1 TIGRFAM: oligoendopeptidase, M3 family; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: hau:Haur_4178 peptidase M3A and M3B thimet/oligopeptidase F YP_002537187.1 KEGG: mbu:Mbur_1713 NADPH-dependent FMN reductase YP_002537189.1 KEGG: gsu:GSU0164 hypothetical protein YP_002537190.1 KEGG: gme:Gmet_0214 hypothetical protein YP_002537193.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gur:Gura_0918 LysR family transcriptional regulator YP_002537194.1 PFAM: PKD domain containing protein; KEGG: gur:Gura_0919 PKD domain-containing protein YP_002537195.1 KEGG: gur:Gura_0920 hypothetical protein YP_002537196.1 KEGG: gur:Gura_0921 hypothetical protein YP_002537197.1 KEGG: gur:Gura_0922 hypothetical protein YP_002537198.1 PFAM: NHL repeat containing protein; KEGG: gur:Gura_0923 NHL repeat-containing protein YP_002537199.1 KEGG: gur:Gura_0924 hypothetical protein YP_002537200.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: gur:Gura_0925 two component, sigma-54 specific, fis family transcriptional regulator YP_002537201.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; SNARE associated Golgi protein; KEGG: gur:Gura_1562 hypothetical protein YP_002537203.1 PFAM: response regulator receiver; type IV pilus assembly PilZ; KEGG: gur:Gura_0926 response regulator receiver modulated PilZ sensor protein YP_002537204.1 KEGG: gur:Gura_0927 hypothetical protein YP_002537205.1 KEGG: gur:Gura_0928 replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: ATPase AAA YP_002537206.1 TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; KEGG: gur:Gura_0929 DNA repair protein RecO YP_002537207.1 PFAM: phosphate-selective porin O and P; KEGG: gur:Gura_0930 hypothetical protein YP_002537208.1 SMART: hypothetical protein; KEGG: gur:Gura_0931 hypothetical protein YP_002537209.1 PFAM: dihydrofolate reductase region; KEGG: gur:Gura_0932 dihydrofolate reductase YP_002537210.1 KEGG: gur:Gura_0935 MutS2 family protein; TIGRFAM: MutS2 family protein; PFAM: DNA mismatch repair protein MutS domain protein; Smr protein/MutS2; SMART: MutS III domain protein YP_002537211.1 KEGG: gur:Gura_0936 hypothetical protein YP_002537212.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: gur:Gura_0937 phospholipase D/transphosphatidylase YP_002537213.1 PFAM: nitrogen-fixing NifU domain protein; KEGG: gur:Gura_0939 NifU domain-containing protein YP_002537214.1 catalyzes the formation of fumarate from aspartate YP_002537215.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: gur:Gura_0942 HAD family hydrolase YP_002537216.1 PFAM: protein of unknown function DUF185; KEGG: gur:Gura_0943 hypothetical protein YP_002537217.1 PFAM: hypothetical protein; KEGG: gur:Gura_0944 helix-turn-helix, type 11 domain-containing protein YP_002537218.1 PFAM: helicase domain protein; DEAD/DEAH box helicase; SMART: DEAD/DEAH box helicases; KEGG: gur:Gura_0945 DEAD/DEAH box helicase domain-containing protein YP_002537219.1 PFAM: PilT protein domain protein; KEGG: glo:Glov_0067 PilT protein domain protein YP_002537220.1 KEGG: glo:Glov_0068 hypothetical protein YP_002537221.1 KEGG: gur:Gura_0955 tRNA (guanine-N(7)-)-methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; PFAM: methyltransferase YP_002537222.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: gbm:Gbem_3654 methyl-accepting chemotaxis sensory transducer YP_002537223.1 KEGG: gur:Gura_0956 Glu/Leu/Phe/Val dehydrogenase, C terminal YP_002537224.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: gur:Gura_0958 cold-shock DNA-binding domain-containing protein YP_002537225.1 KEGG: gur:Gura_0959 hypothetical protein YP_002537226.1 KEGG: gur:Gura_0962 hypothetical protein YP_002537227.1 KEGG: glo:Glov_3509 hypothetical protein YP_002537228.1 stimulates methylation of MCP proteins; PFAM: chemotaxis protein CheD family protein; KEGG: gur:Gura_0963 chemotaxis protein CheD, stimulates methylation of MCP protein YP_002537229.1 KEGG: gur:Gura_1754 hypothetical protein YP_002537230.1 KEGG: gbm:Gbem_2936 methyltransferase type 11 YP_002537231.1 KEGG: eta:ETA_06700 conserved hypothetical protein YjjJ YP_002537233.1 KEGG: gur:Gura_3433 hypothetical protein YP_002537234.1 PFAM: hypothetical protein; protein of unknown function DUF21; transporter-associated region; KEGG: gur:Gura_1143 hypothetical protein YP_002537235.1 PFAM: Integral membrane protein TerC; KEGG: gur:Gura_1144 integral membrane protein TerC YP_002537236.1 PFAM: peptidase M48 Ste24p; KEGG: gur:Gura_1145 peptidase M48, Ste24p YP_002537237.1 PFAM: response regulator receiver; ANTAR domain protein; KEGG: gur:Gura_1146 response regulator receiver/ANTAR domain-containing protein YP_002537238.1 PFAM: secretion protein HlyD family protein; KEGG: gur:Gura_1147 secretion protein HlyD family protein YP_002537239.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gur:Gura_1148 ABC transporter YP_002537240.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gur:Gura_1149 ABC transporter YP_002537241.1 PFAM: ABC transporter; KEGG: gur:Gura_1150 ABC transporter YP_002537243.1 PFAM: ABC transporter; KEGG: gur:Gura_1151 ABC transporter YP_002537244.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; type IV pilus assembly PilZ; SMART: ATPase AAA; KEGG: gur:Gura_1152 sigma-54 dependent trancsriptional regulator YP_002537245.1 KEGG: gur:Gura_1153 hypothetical protein YP_002537246.1 KEGG: gur:Gura_1154 hypothetical protein YP_002537247.1 PFAM: peptidase C39 bacteriocin processing; KEGG: gur:Gura_1155 peptidase C39, bacteriocin processing YP_002537248.1 KEGG: gur:Gura_1156 hypothetical protein YP_002537249.1 KEGG: gur:Gura_1157 hypothetical protein YP_002537250.1 PFAM: Ig family protein; KEGG: gur:Gura_1161 hypothetical protein YP_002537251.1 KEGG: gur:Gura_1162 hypothetical protein YP_002537252.1 KEGG: gur:Gura_1163 hypothetical protein YP_002537253.1 PFAM: protein of unknown function YGGT; KEGG: gur:Gura_1165 protein of unknown function YGGT YP_002537254.1 PFAM: DivIVA family protein; KEGG: gur:Gura_1166 DivIVA family protein YP_002537255.1 PFAM: protein of unknown function DUF167; KEGG: gur:Gura_1167 hypothetical protein YP_002537256.1 PFAM: hypothetical protein; KEGG: gbm:Gbem_1495 signal-transduction protein with CBS domains YP_002537257.1 TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: gur:Gura_1168 FmdB family regulatory protein YP_002537258.1 PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: gur:Gura_1169 methylenetetrahydrofolate dehydrogenase (NADP(+)) YP_002537259.1 KEGG: gur:Gura_1170 hypothetical protein YP_002537260.1 PFAM: methylenetetrahydrofolate reductase; KEGG: gur:Gura_1171 methylenetetrahydrofolate reductase YP_002537261.1 TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: gur:Gura_1172 UTP-glucose-1-phosphate uridylyltransferase GalU YP_002537262.1 TIGRFAM: TonB family protein; KEGG: gur:Gura_1173 TonB family protein YP_002537263.1 PFAM: protein of unknown function UPF0016; KEGG: gur:Gura_1174 hypothetical protein YP_002537264.1 PFAM: amidohydrolase; KEGG: gur:Gura_2276 amidohydrolase YP_002537265.1 KEGG: gur:Gura_0643 hypothetical protein YP_002537266.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: gur:Gura_1211 electron transfer flavoprotein beta-subunit YP_002537267.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: gur:Gura_1212 electron transfer flavoprotein, alpha subunit YP_002537268.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: gur:Gura_1213 hypothetical protein YP_002537269.1 PFAM: glutamine amidotransferase class-I; KEGG: gur:Gura_1214 glutamine amidotransferase class-I YP_002537270.1 KEGG: gsu:GSU1872 hypothetical protein YP_002537271.1 TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: gbm:Gbem_2277 acetate kinase YP_002537272.1 KEGG: gme:Gmet_2902 cytochrome c3 YP_002537273.1 TIGRFAM: AbrB family transcriptional regulator; PFAM: SpoVT/AbrB domain protein; KEGG: gur:Gura_1405 AbrB family transcriptional regulator YP_002537274.1 PFAM: PilT protein domain protein; KEGG: gur:Gura_1404 PilT domain-containing protein YP_002537275.1 PFAM: amino acid permease-associated region; KEGG: ank:AnaeK_0942 amino acid transporter-like protein YP_002537276.1 KEGG: gbm:Gbem_1150 hypothetical protein YP_002537277.1 PFAM: nitrogen regulatory protein P-II; KEGG: gsu:GSU0939 nitrogen regulatory protein P-II YP_002537278.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: gur:Gura_3365 ammonium transporter YP_002537279.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gur:Gura_3364 histidine kinase YP_002537280.1 PFAM: inositol monophosphatase; KEGG: gur:Gura_3355 inositol-phosphate phosphatase YP_002537281.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate YP_002537282.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: gur:Gura_3335 two component, sigma-54 specific, fis family transcriptional regulator YP_002537283.1 KEGG: mac:MA1270 sensory transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002537284.1 KEGG: mac:MA1270 sensory transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002537285.1 PFAM: domain of unknown function DUF1745; KEGG: gur:Gura_2119 hypothetical protein YP_002537286.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mac:MA1270 sensory transduction histidine kinase YP_002537287.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: gsu:GSU0952 GGDEF domain-containing protein YP_002537288.1 KEGG: gur:Gura_0126 hypothetical protein YP_002537289.1 TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: gbm:Gbem_0017 magnesium and cobalt transport protein CorA YP_002537290.1 KEGG: slo:Shew_2603 hypothetical protein YP_002537291.1 PFAM: Hyalin; KEGG: cau:Caur_1093 hyalin YP_002537293.1 TIGRFAM: cytochrome C family protein; PFAM: multihaem cytochrome; KEGG: gur:Gura_2035 cytochrome c family protein YP_002537294.1 PFAM: Fibronectin type III domain protein; KEGG: gur:Gura_2036 fibronectin, type III domain-containing protein YP_002537295.1 TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: gur:Gura_1216 XRE family plasmid maintenance system antidote protein YP_002537296.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: gme:Gmet_1000 haloacid dehalogenase-like hydrolase YP_002537297.1 TIGRFAM: alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein; KEGG: ppd:Ppro_1791 alkylphosphonate utilization operon protein PhnA YP_002537298.1 PFAM: protein of unknown function DUF72; KEGG: gbm:Gbem_0238 protein of unknown function DUF72 YP_002537300.1 KEGG: dol:Dole_1521 hypothetical protein YP_002537301.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: gur:Gura_2450 GntR family transcriptional regulator YP_002537302.1 PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gme:Gmet_2642 GAF sensor hybrid histidine kinase YP_002537303.1 PFAM: MCP methyltransferase CheR-type; KEGG: gme:Gmet_2641 MCP methyltransferase, CheR-type YP_002537304.1 PFAM: chemotaxis protein CheB; KEGG: gme:Gmet_2640 chemotaxis protein CheB YP_002537305.1 KEGG: gbm:Gbem_2494 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002537306.1 catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA YP_002537307.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: gur:Gura_3300 ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_002537308.1 PFAM: ketose-bisphosphate aldolase class-II; KEGG: gur:Gura_3299 fructose/tagatose bisphosphate aldolase-like protein YP_002537309.1 PFAM: type IV pilus assembly PilZ; KEGG: gur:Gura_3298 type IV pilus assembly PilZ YP_002537310.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: gur:Gura_3297 metal-dependent phosphohydrolase YP_002537312.1 PFAM: import inner membrane translocase subunit Tim44; KEGG: gur:Gura_3295 import inner membrane translocase, subunit Tim44 YP_002537313.1 KEGG: hypothetical protein YP_002537314.1 KEGG: gur:Gura_3294 hypothetical protein YP_002537315.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: gur:Gura_3293 tRNA/rRNA methyltransferase (SpoU) YP_002537316.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate YP_002537317.1 KEGG: gur:Gura_3287 hypothetical protein YP_002537318.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gur:Gura_3285 ABC transporter YP_002537319.1 KEGG: gur:Gura_3284 hypothetical protein YP_002537320.1 KEGG: gur:Gura_3284 hypothetical protein YP_002537321.1 KEGG: gur:Gura_3283 hypothetical protein YP_002537322.1 KEGG: gur:Gura_3282 hypothetical protein YP_002537323.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: gur:Gura_3281 methyl-accepting chemotaxis sensory transducer YP_002537324.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis YP_002537325.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; KEGG: gur:Gura_3279 acetyl-CoA carboxylase, carboxyl transferase, beta subunit YP_002537326.1 TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: gur:Gura_3277 FolC bifunctional protein YP_002537327.1 PFAM: OstA family protein; Organic solvent tolerance protein; KEGG: gur:Gura_3276 organic solvent tolerance protein YP_002537328.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: gur:Gura_3273 dTDP-glucose 4,6-dehydratase YP_002537329.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG: gur:Gura_3272 dTDP-4-dehydrorhamnose reductase YP_002537330.1 PFAM: mannose-6-phosphate isomerase type II; cupin; KEGG: gur:Gura_3271 mannose-6-phosphate isomerase YP_002537331.1 PFAM: Na+/H+ antiporter NhaA; KEGG: gsu:GSU2303 Na+/H+ antiporter family protein YP_002537332.1 PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; KEGG: gur:Gura_3270 nucleotidyl transferase YP_002537333.1 PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: gur:Gura_3269 aldehyde ferredoxin oxidoreductase YP_002537334.1 PFAM: class II aldolase/adducin family protein; KEGG: gur:Gura_3265 class II aldolase/adducin family protein YP_002537335.1 TIGRFAM: integral membrane protein MviN; PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: gur:Gura_3261 integral membrane protein MviN YP_002537336.1 TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: gur:Gura_3260 methylated-DNA--protein-cysteine methyltransferase YP_002537337.1 functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era YP_002537338.1 KEGG: gbm:Gbem_1180 hypothetical protein YP_002537339.1 KEGG: gur:Gura_3258 queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylase, various specificities; queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase YP_002537340.1 TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; KEGG: gbm:Gbem_3334 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family YP_002537341.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol YP_002537342.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gur:Gura_3255 succinate dehydrogenase/fumarate reductase iron-sulfur subunit YP_002537343.1 KEGG: gur:Gura_3254 hypothetical protein YP_002537344.1 KEGG: gur:Gura_3253 hypothetical protein YP_002537345.1 KEGG: gur:Gura_3252 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; ATPase AAA; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA YP_002537346.1 KEGG: gur:Gura_3251 hypothetical protein YP_002537347.1 amylomaltase; acts to release glucose from maltodextrins YP_002537348.1 KEGG: gur:Gura_3249 O-acetylhomoserine/O-acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase YP_002537349.1 PFAM: nickel-dependent hydrogenase large subunit; KEGG: gur:Gura_1122 nickel-dependent hydrogenase, large subunit YP_002537350.1 PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: gur:Gura_1123 NADH ubiquinone oxidoreductase, 20 kDa subunit YP_002537351.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: gur:Gura_1124 oxidoreductase FAD-binding subunit YP_002537352.1 KEGG: gur:Gura_1125 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002537353.1 PFAM: outer membrane efflux protein; KEGG: gur:Gura_1126 outer membrane efflux protein YP_002537354.1 KEGG: gbm:Gbem_0272 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002537355.1 KEGG: gur:Gura_3620 hypothetical protein YP_002537356.1 PFAM: hypothetical protein; heat shock protein DnaJ domain protein; response regulator receiver; hypothetical protein; SMART: hypothetical protein; KEGG: gur:Gura_3619 response regulator receiver protein YP_002537357.1 PFAM: aminodeoxychorismate lyase; KEGG: gur:Gura_3618 aminodeoxychorismate lyase YP_002537358.1 PFAM: polysaccharide deacetylase; KEGG: gur:Gura_3617 polysaccharide deacetylase YP_002537359.1 PFAM: glycosyl transferase family 2; KEGG: gur:Gura_3616 glycosyl transferase family protein YP_002537360.1 PFAM: radical SAM protein; KEGG: gur:Gura_3615 radical SAM domain-containing protein YP_002537361.1 PFAM: cobalamin B12-binding domain protein; radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: gur:Gura_3614 radical SAM domain-containing protein YP_002537362.1 PFAM: lipid A biosynthesis acyltransferase; KEGG: gur:Gura_3613 lipid A biosynthesis acyltransferase YP_002537363.1 KEGG: gur:Gura_3612 hypothetical protein YP_002537364.1 PFAM: cobalamin B12-binding domain protein; radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: gur:Gura_3611 radical SAM domain-containing protein YP_002537365.1 KEGG: gur:Gura_3610 (acyl-carrier-protein) S-malonyltransferase-like protein YP_002537366.1 PFAM: thioesterase; KEGG: gur:Gura_3609 thioesterase YP_002537367.1 PFAM: cobalamin B12-binding domain protein; radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: gur:Gura_3608 radical SAM domain-containing protein YP_002537368.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gur:Gura_3607 short-chain dehydrogenase/reductase SDR YP_002537369.1 PFAM: Beta-ketoacyl synthase; KEGG: gur:Gura_3606 beta-ketoacyl synthase YP_002537370.1 PFAM: Beta-ketoacyl synthase; KEGG: gur:Gura_3605 beta-ketoacyl synthase YP_002537371.1 PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: gur:Gura_3604 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ YP_002537372.1 PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: gur:Gura_3596 outer membrane lipoprotein carrier protein LolA YP_002537373.1 KEGG: gur:Gura_3595 RND efflux transporter YP_002537374.1 KEGG: gur:Gura_3594 hypothetical protein YP_002537375.1 PFAM: cobalamin B12-binding domain protein; radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: gur:Gura_3593 radical SAM domain-containing protein YP_002537376.1 KEGG: gur:Gura_3592 hypothetical protein YP_002537377.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: gur:Gura_3591 alpha amylase, catalytic region YP_002537378.1 KEGG: gur:Gura_3589 hypothetical protein YP_002537379.1 KEGG: gbm:Gbem_0205 hypothetical protein YP_002537380.1 PFAM: nitroreductase; KEGG: gur:Gura_1241 nitroreductase YP_002537381.1 PFAM: glycosyl transferase group 1; KEGG: noc:Noc_1554 glycosyl transferase, group 1 YP_002537382.1 PFAM: Amylo-alpha-16-glucosidase; KEGG: noc:Noc_1553 amylo-alpha-1,6-glucosidase YP_002537383.1 KEGG: gme:Gmet_3522 outer membrane protein YP_002537384.1 PFAM: carbonic anhydrase; KEGG: gur:Gura_3320 carbonic anhydrase YP_002537385.1 PFAM: FxsA cytoplasmic membrane protein; KEGG: gur:Gura_3319 FxsA cytoplasmic membrane protein YP_002537386.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: gur:Gura_3311 methyl-accepting chemotaxis sensory transducer YP_002537387.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: gbm:Gbem_1884 methyl-accepting chemotaxis sensory transducer YP_002537388.1 PFAM: NUDIX hydrolase; NADH pyrophosphatase-like ; Zinc ribbon NADH pyrophosphatase; KEGG: gur:Gura_3307 NUDIX hydrolase YP_002537389.1 KEGG: gur:Gura_3306 hypothetical protein YP_002537390.1 KEGG: gur:Gura_3304 hypothetical protein YP_002537391.1 PFAM: protein of unknown function DUF479; KEGG: gme:Gmet_2389 hypothetical protein YP_002537392.1 PFAM: RNP-1 like RNA-binding protein; KEGG: gme:Gmet_2631 RNA-binding region RNP-1 YP_002537393.1 KEGG: gbm:Gbem_3299 hypothetical protein YP_002537394.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: gur:Gura_3311 methyl-accepting chemotaxis sensory transducer YP_002537395.1 PFAM: Mammalian cell entry related domain protein; KEGG: gur:Gura_1243 hypothetical protein YP_002537396.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gur:Gura_1244 ABC transporter YP_002537397.1 PFAM: protein of unknown function DUF140; KEGG: gur:Gura_1245 hypothetical protein YP_002537398.1 KEGG: gur:Gura_1246 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; ATPase AAA; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA YP_002537399.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gur:Gura_1247 ABC transporter YP_002537400.1 PFAM: beta-lactamase domain protein; KEGG: cbl:CLK_0366 beta-lactamase domain-containing protein YP_002537401.1 PFAM: HNH endonuclease; KEGG: gur:Gura_1250 HNH endonuclease YP_002537402.1 TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; ribonuclease E and G; KEGG: gur:Gura_1256 ribonuclease YP_002537403.1 KEGG: gur:Gura_1257 hypothetical protein YP_002537404.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling YP_002537405.1 PFAM: protein of unknown function DUF190; KEGG: gur:Gura_1259 hypothetical protein YP_002537406.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide YP_002537407.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: gur:Gura_1261 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase YP_002537408.1 TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; HI0933 family protein; KEGG: gur:Gura_1264 dihydrolipoamide dehydrogenase YP_002537409.1 Catalyzes the conversion of citrate to isocitrate YP_002537410.1 KEGG: gur:Gura_1266 pyruvate dehydrogenase (acetyl-transferring); TIGRFAM: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; PFAM: dehydrogenase E1 component YP_002537411.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: gur:Gura_1267 transketolase, central region YP_002537412.1 PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: gur:Gura_1268 branched-chain alpha-keto acid dehydrogenase subunit E2 YP_002537413.1 TIGRFAM: lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase; KEGG: gur:Gura_1269 lipoate-protein ligase B YP_002537414.1 PFAM: peptidase S16 lon domain protein; KEGG: gur:Gura_1270 peptidase S16, lon domain-containing protein YP_002537415.1 PFAM: glycosyl transferase family 2; KEGG: gur:Gura_1283 glycosyl transferase family protein YP_002537416.1 PFAM: response regulator receiver; CheW domain protein; KEGG: gur:Gura_1284 chemotaxis protein CheW YP_002537417.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: gur:Gura_1285 formate dehydrogenase YP_002537418.1 PFAM: Chromate transporter; KEGG: gur:Gura_1287 chromate transporter YP_002537419.1 PFAM: Chromate transporter; KEGG: gur:Gura_1288 chromate transporter YP_002537420.1 KEGG: gur:Gura_1289 hypothetical protein YP_002537421.1 PFAM: zinc finger DksA/TraR C4-type; KEGG: gur:Gura_1290 TraR/DksA family transcriptional regulator YP_002537422.1 PFAM: cobalamin B12-binding domain protein; radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: gur:Gura_1298 radical SAM domain-containing protein YP_002537423.1 PFAM: radical SAM protein; KEGG: gur:Gura_1302 radical SAM domain-containing protein YP_002537424.1 KEGG: gur:Gura_1303 hypothetical protein YP_002537425.1 KEGG: pin:Ping_2394 filamentous haemagglutinin outer membrane protein YP_002537427.1 catalyzes the hydrolysis of acylphosphate YP_002537428.1 KEGG: gur:Gura_1305 DNA ligase, NAD-dependent; TIGRFAM: DNA ligase, NAD-dependent; PFAM: helix-hairpin-helix motif; BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; NAD-dependent DNA ligase adenylation; SMART: Helix-hairpin-helix DNA-binding class 1; NAD-dependent DNA ligase YP_002537429.1 PFAM: helix-turn-helix domain protein; KEGG: gur:Gura_0591 XRE family transcriptional regulator YP_002537430.1 KEGG: pph:Ppha_2275 hypothetical protein YP_002537431.1 PFAM: plasmid stabilization system; KEGG: mmw:Mmwyl1_1848 hypothetical protein YP_002537432.1 PFAM: UvrD/REP helicase; KEGG: gur:Gura_1325 UvrD/REP helicase YP_002537433.1 PFAM: Rubrerythrin; KEGG: ppd:Ppro_0468 rubrerythrin YP_002537434.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: gur:Gura_1330 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_002537435.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: gur:Gura_1331 peptidyl-prolyl cis-trans isomerase, cyclophilin type YP_002537436.1 KEGG: gur:Gura_1490 MiaB-like tRNA modifying enzyme; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: radical SAM protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB YP_002537437.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs YP_002537438.1 TIGRFAM: cysteine desulfurase NifS; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: gur:Gura_1493 aminotransferase, class V YP_002537439.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: gur:Gura_1494 BadM/Rrf2 family transcriptional regulator YP_002537440.1 TIGRFAM: serine O-acetyltransferase; KEGG: gur:Gura_1495 serine O-acetyltransferase YP_002537441.1 KEGG: gur:Gura_1496 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002537442.1 KEGG: gur:Gura_1497 hypothetical protein YP_002537443.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity YP_002537444.1 KEGG: gur:Gura_1500 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41 YP_002537445.1 PFAM: phosphate-selective porin O and P; KEGG: gme:Gmet_1042 phosphate-selective porin O and P YP_002537446.1 KEGG: gbm:Gbem_1721 hypothetical protein YP_002537447.1 TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: gur:Gura_1509 phosphate ABC transporter, periplasmic phosphate-binding protein YP_002537448.1 PFAM: GH3 auxin-responsive promoter; KEGG: gur:Gura_2573 GH3 auxin-responsive promoter YP_002537449.1 KEGG: gur:Gura_2572 hypothetical protein YP_002537450.1 PFAM: EAL domain protein; KEGG: gur:Gura_1510 diguanylate phosphodiesterase YP_002537451.1 KEGG: gbm:Gbem_1857 hypothetical protein YP_002537452.1 KEGG: gur:Gura_1511 hypothetical protein YP_002537453.1 KEGG: gur:Gura_1512 hypothetical protein YP_002537454.1 PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: gur:Gura_1513 stage II sporulation E family protein YP_002537455.1 TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: gur:Gura_2558 phosphate ABC transporter, periplasmic phosphate-binding protein YP_002537456.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: gur:Gura_2556 two component transcriptional regulator YP_002537457.1 KEGG: gur:Gura_1503 hypothetical protein YP_002537458.1 TIGRFAM: peptidase T-like protein; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: glo:Glov_3034 peptidase T-like protein YP_002537459.1 PFAM: PemK family protein; KEGG: gme:Gmet_2503 MazF family transcriptional regulator YP_002537460.1 PFAM: SpoVT/AbrB domain protein; KEGG: gur:Gura_3379 MazE family transcriptional regulator YP_002537461.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: mth:MTH1876 hypothetical protein YP_002537462.1 TIGRFAM: extracellular repeat protein, HAF family; KEGG: mac:MA0957 hypothetical protein YP_002537463.1 TIGRFAM: extracellular repeat protein, HAF family; KEGG: mac:MA0957 hypothetical protein YP_002537464.1 TIGRFAM: extracellular repeat protein, HAF family; KEGG: mac:MA0957 hypothetical protein YP_002537465.1 TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: gur:Gura_2562 phosphate uptake regulator, PhoU YP_002537466.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation YP_002537467.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gur:Gura_2560 phosphate ABC transporter, inner membrane subunit PstA YP_002537468.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gur:Gura_2559 phosphate ABC transporter, inner membrane subunit PstC YP_002537469.1 TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: gur:Gura_2558 phosphate ABC transporter, periplasmic phosphate-binding protein YP_002537470.1 KEGG: gur:Gura_1519 hypothetical protein YP_002537471.1 PFAM: protein of unknown function DUF502; KEGG: gur:Gura_1520 hypothetical protein YP_002537472.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; Metal-dependent hydrolase HDOD; KEGG: gbm:Gbem_3984 metal dependent phosphohydrolase YP_002537473.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: gur:Gura_2692 methyl-accepting chemotaxis sensory transducer YP_002537474.1 KEGG: sme:SM_b20355 hypothetical protein YP_002537475.1 PFAM: regulatory protein TetR; KEGG: gur:Gura_1655 TetR family transcriptional regulator YP_002537476.1 PFAM: ABC transporter; KEGG: gbm:Gbem_0438 ABC transporter YP_002537477.1 PFAM: ABC transporter; KEGG: gur:Gura_1656 hypothetical protein YP_002537478.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gur:Gura_1657 ABC transporter YP_002537479.1 PFAM: protein of unknown function DUF214; KEGG: gme:Gmet_1517 hypothetical protein YP_002537480.1 KEGG: gme:Gmet_1516 hypothetical protein YP_002537481.1 KEGG: gme:Gmet_1515 hypothetical protein YP_002537482.1 KEGG: gme:Gmet_1514 hypothetical protein YP_002537483.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: maq:Maqu_2925 pyridoxamine 5'-phosphate oxidase-related, FMN-binding YP_002537484.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: ppd:Ppro_3541 alpha/beta hydrolase domain-containing protein YP_002537485.1 PFAM: alpha/beta hydrolase fold; KEGG: pmy:Pmen_2705 alpha/beta hydrolase fold YP_002537486.1 SMART: PDZ/DHR/GLGF domain protein; KEGG: gbm:Gbem_3592 PDZ/DHR/GLGF domain protein YP_002537487.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gsu:GSU1576 short chain dehydrogenase/reductase family oxidoreductase YP_002537489.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: art:Arth_4410 transposase IS116/IS110/IS902 family protein YP_002537490.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gur:Gura_3443 glyoxalase/bleomycin resistance protein/dioxygenase YP_002537491.1 PFAM: transcription activator effector binding; KEGG: chu:CHU_2283 hypothetical protein YP_002537492.1 PFAM: RNA methylase; methyltransferase type 11; methyltransferase type 12; KEGG: glo:Glov_0085 methyltransferase type 11 YP_002537493.1 KEGG: cts:Ctha_2083 hypothetical protein YP_002537494.1 KEGG: azo:azo2370 hypothetical secreted protein YP_002537495.1 KEGG: rba:RB9913 signal peptide YP_002537496.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: gme:Gmet_2485 hypothetical protein YP_002537497.1 KEGG: gme:Gmet_1511 hypothetical protein YP_002537499.1 PFAM: alpha/beta hydrolase fold; KEGG: amr:AM1_E0219 carboxylesterase NP YP_002537500.1 catalyzes the cleavage of carbon-halogen bonds in aliphatic compounds forming a primary alcohol and a halide YP_002537501.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: sfu:Sfum_3563 methyltransferase type 11 YP_002537502.1 PFAM: adenylate cyclase; KEGG: gur:Gura_1526 adenylate cyclase YP_002537503.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: sen:SACE_1408 AraC family transcription regulator YP_002537504.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: pla:Plav_0870 alpha/beta hydrolase domain-containing protein YP_002537505.1 KEGG: bcz:BCZK1590 hypothetical protein YP_002537506.1 KEGG: gme:Gmet_0218 hypothetical protein YP_002537507.1 PFAM: beta-lactamase; KEGG: gme:Gmet_1507 beta-lactamase YP_002537508.1 KEGG: gur:Gura_1526 adenylate cyclase YP_002537509.1 KEGG: glo:Glov_0140 hypothetical protein YP_002537510.1 PFAM: regulatory protein MerR; methyltransferase type 11; methyltransferase type 12; KEGG: amc:MADE_04067 SAM-dependent methyltransferase YP_002537511.1 KEGG: gbm:Gbem_0509 hypothetical protein YP_002537513.1 PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: sun:SUN_0881 hypothetical protein YP_002537514.1 PFAM: UbiE/COQ5 methyltransferase; methyltransferase small; methyltransferase type 11; methyltransferase type 12; KEGG: gur:Gura_3506 methyltransferase type 11 YP_002537515.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gur:Gura_1522 GCN5-related N-acetyltransferase YP_002537516.1 KEGG: gur:Gura_1525 hypothetical protein YP_002537517.1 KEGG: pgi:PG1466 hypothetical protein YP_002537518.1 PFAM: protein of unknown function DUF1330; KEGG: mxa:MXAN_2753 hypothetical protein YP_002537519.1 PFAM: Abortive infection protein; KEGG: scl:sce5558 hypothetical protein YP_002537520.1 PFAM: helix-turn-helix- domain containing protein AraC type; transcription activator effector binding; KEGG: gur:Gura_3503 transcription activator, effector binding YP_002537521.1 KEGG: gur:Gura_0783 hypothetical protein YP_002537522.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bpt:Bpet2223 AraC family transcriptional regulator YP_002537523.1 PFAM: GCN5-related N-acetyltransferase; isochorismatase hydrolase; KEGG: bpt:Bpet2222 isochorismatase family protein YP_002537524.1 SMART: regulatory protein ArsR; KEGG: sco:SCO3696 transcriptional regulator YP_002537525.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gur:Gura_1536 short-chain dehydrogenase/reductase SDR YP_002537526.1 PFAM: UbiE/COQ5 methyltransferase; methyltransferase type 11; methyltransferase type 12; KEGG: gbm:Gbem_3170 methyltransferase type 11 YP_002537527.1 PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: gsu:GSU0772 NADPH-dependent FMN reductase domain-containing protein YP_002537528.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sfu:Sfum_0919 4Fe-4S ferredoxin, iron-sulfur binding domain protein YP_002537529.1 TIGRFAM: prevent-host-death family protein; KEGG: gur:Gura_0630 prevent-host-death family protein YP_002537530.1 KEGG: gur:Gura_0629 nucleic acid binding protein YP_002537531.1 PFAM: transglutaminase domain protein; KEGG: gur:Gura_1528 transglutaminase-like protein enzymes cysteine protease-like protein YP_002537532.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: sfu:Sfum_0599 RNA polymerase, sigma-24 subunit, ECF subfamily YP_002537534.1 PFAM: peptidase S24 and S26 domain protein; KEGG: mmw:Mmwyl1_3710 signal peptidase I YP_002537535.1 KEGG: gme:Gmet_2528 hypothetical protein YP_002537536.1 PFAM: peptidase M16 domain protein; KEGG: gur:Gura_3630 peptidase M16 domain-containing protein YP_002537537.1 PFAM: peptidase M16 domain protein; KEGG: gur:Gura_3629 peptidase M16 domain-containing protein YP_002537538.1 PFAM: GAF domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: gbm:Gbem_1212 metal dependent phosphohydrolase YP_002537539.1 PFAM: metallophosphoesterase; KEGG: gur:Gura_3247 metallophosphoesterase YP_002537540.1 KEGG: gur:Gura_3246 8-amino-7-oxononanoate synthase; TIGRFAM: 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II YP_002537541.1 PFAM: alpha/beta hydrolase fold; KEGG: gur:Gura_3245 alpha/beta hydrolase fold YP_002537542.1 PFAM: UbiE/COQ5 methyltransferase; methyltransferase type 11; methyltransferase type 12; KEGG: gur:Gura_3244 methyltransferase type 11 YP_002537543.1 PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers YP_002537544.1 long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors YP_002537545.1 KEGG: gur:Gura_1727 hypothetical protein YP_002537547.1 PFAM: protein of unknown function UPF0157; KEGG: ppd:Ppro_1483 hypothetical protein YP_002537548.1 PFAM: GumN family protein; KEGG: sat:SYN_01008 hypothetical protein YP_002537549.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence YP_002537550.1 TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: gur:Gura_3240 lysyl-tRNA synthetase YP_002537551.1 TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: gur:Gura_3239 LolC/E family lipoprotein releasing system, transmembrane protein YP_002537552.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gur:Gura_3238 ABC transporter YP_002537553.1 TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: gur:Gura_3237 surface antigen (D15) YP_002537554.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: gur:Gura_3236 outer membrane chaperone Skp (OmpH) YP_002537555.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis YP_002537556.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP YP_002537557.1 TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; KEGG: gur:Gura_3233 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase YP_002537558.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM YP_002537559.1 KEGG: gur:Gura_3231 lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; TIGRFAM: lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; PFAM: ABC transporter transmembrane region; ABC transporter; SMART: ATPase AAA YP_002537560.1 PFAM: lipid A biosynthesis acyltransferase; KEGG: gur:Gura_3230 lipid A biosynthesis acyltransferase YP_002537561.1 PFAM: 3-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: gur:Gura_3229 3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein YP_002537562.1 KEGG: gur:Gura_3228 tetraacyldisaccharide 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase YP_002537563.1 PFAM: protein of unknown function DUF343; KEGG: gur:Gura_3227 hypothetical protein YP_002537564.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: gme:Gmet_3038 secretion protein HlyD YP_002537565.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gme:Gmet_3037 ABC transporter-related protein YP_002537566.1 PFAM: protein of unknown function DUF214; KEGG: gur:Gura_1127 hypothetical protein YP_002537567.1 PFAM: glycosyl transferase family 9; KEGG: gbm:Gbem_0849 lipopolysaccharide heptosyltransferase II YP_002537568.1 KEGG: cbc:CbuK_0350 hypothetical protein YP_002537569.1 PFAM: glycosyl transferase group 1; KEGG: gur:Gura_3222 glycosyl transferase, group 1 YP_002537570.1 PFAM: glycosyl transferase family 2; KEGG: gur:Gura_3224 glycosyl transferase family protein YP_002537571.1 PFAM: glycosyl transferase family 9; KEGG: gur:Gura_3215 glycosyl transferase family protein YP_002537572.1 TIGRFAM: lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase family 9; KEGG: gur:Gura_3214 lipopolysaccharide heptosyltransferase I YP_002537573.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: gsu:GSU2243 UDP-N-acetylglucosamine 2-epimerase YP_002537574.1 KEGG: gur:Gura_3213 hypothetical protein YP_002537575.1 TIGRFAM: cytidyltransferase-related domain protein; rfaE bifunctional protein; PFAM: cytidylyltransferase; PfkB domain protein; KEGG: gur:Gura_3211 RfaE bifunctional protein YP_002537576.1 TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: gur:Gura_3210 GDP-mannose 4,6-dehydratase YP_002537577.1 KEGG: gur:Gura_1694 hypothetical protein YP_002537578.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: gur:Gura_3209 NAD-dependent epimerase/dehydratase YP_002537579.1 TIGRFAM: glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: glo:Glov_0782 glucose-1-phosphate cytidylyltransferase YP_002537580.1 TIGRFAM: CDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; Male sterility domain; KEGG: glo:Glov_0783 CDP-glucose 4,6-dehydratase YP_002537581.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: gur:Gura_3788 DegT/DnrJ/EryC1/StrS aminotransferase YP_002537582.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: gur:Gura_3787 NAD-dependent epimerase/dehydratase YP_002537583.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: gur:Gura_3786 NAD-dependent epimerase/dehydratase YP_002537584.1 PFAM: polysaccharide biosynthesis protein; KEGG: gur:Gura_3785 polysaccharide biosynthesis protein YP_002537585.1 PFAM: glycosyl transferase family 2; KEGG: seg:SG2117 glycosyltransferase YP_002537586.1 KEGG: fjo:Fjoh_0344 hypothetical protein YP_002537587.1 KEGG: ses:SARI_00796 hypothetical protein YP_002537588.1 PFAM: glycosyl transferase group 1; KEGG: pfl:PFL_5103 glycosyl transferase, group 1 family protein YP_002537589.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; Polysaccharide biosynthesis domain protein; KEGG: gbm:Gbem_1621 polysaccharide biosynthesis protein CapD YP_002537590.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG: gsu:GSU2247 carbohydrate oxidoreductase YP_002537591.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: gsu:GSU2245 UDP-N-acetylglucosamine 2-epimerase YP_002537592.1 KEGG: dar:Daro_1269 colanic acid biosynthesis glycosyl-transferase YP_002537593.1 KEGG: pvi:Cvib_0650 hypothetical protein YP_002537594.1 PFAM: glycosyl transferase family 4; KEGG: pca:Pcar_1489 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_002537595.1 KEGG: ppd:Ppro_3384 hypothetical protein YP_002537596.1 SMART: ATPase AAA; KEGG: mlo:mlr9349 hypothetical protein YP_002537597.1 PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: gur:Gura_3163 hypothetical protein YP_002537598.1 Essential for recycling GMP and indirectly, cGMP YP_002537599.1 TIGRFAM: DNA-directed RNA polymerase subunit omega; PFAM: RNA polymerase Rpb6; KEGG: gur:Gura_3161 DNA-directed RNA polymerase subunit omega YP_002537600.1 KEGG: gur:Gura_3160 (p)ppGpp synthetase I, SpoT/RelA; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase HD region YP_002537601.1 TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: gur:Gura_3159 endoribonuclease L-PSP YP_002537602.1 required for 70S ribosome assembly YP_002537603.1 PFAM: protein of unknown function DUF218; KEGG: gur:Gura_3157 hypothetical protein YP_002537604.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content YP_002537605.1 PFAM: PSP1 domain protein; KEGG: gur:Gura_3155 PSP1 domain-containing protein YP_002537606.1 TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: gur:Gura_3154 DNA polymerase III, delta prime subunit YP_002537607.1 PFAM: thymidylate kinase; KEGG: gur:Gura_3153 dTMP kinase YP_002537608.1 PFAM: ribonuclease III; double-stranded RNA binding domain protein; KEGG: gur:Gura_3152 ribonuclease III YP_002537609.1 PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: gur:Gura_3151 radical SAM domain-containing protein YP_002537610.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome YP_002537611.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains YP_002537612.1 PFAM: response regulator receiver; KEGG: gur:Gura_3148 response regulator receiver protein YP_002537613.1 PFAM: response regulator receiver; KEGG: gur:Gura_3147 response regulator receiver protein YP_002537614.1 PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: gur:Gura_3146 chemotaxis protein CheA YP_002537615.1 SMART: ATPase AAA; KEGG: gur:Gura_3145 ATPase AAA YP_002537616.1 PFAM: CheW domain protein; KEGG: gur:Gura_3144 chemotaxis protein CheW YP_002537617.1 PFAM: response regulator receiver; KEGG: gur:Gura_3143 response regulator receiver protein YP_002537618.1 PFAM: CheW domain protein; KEGG: gur:Gura_3142 chemotaxis protein CheW YP_002537619.1 TIGRFAM: MJ0042 family finger-like protein; PFAM: response regulator receiver; KEGG: gur:Gura_3141 response regulator receiver protein YP_002537620.1 PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: gur:Gura_3140 heat repeat-containing PBS lyase YP_002537621.1 PFAM: MCP methyltransferase CheR-type; KEGG: gur:Gura_3139 protein-glutamate O-methyltransferase YP_002537622.1 PFAM: chemotaxis protein CheB; response regulator receiver; KEGG: gur:Gura_3138 response regulator receiver modulated chemotaxis protein CheB YP_002537623.1 PFAM: GAF domain protein; KEGG: gur:Gura_3137 GAF sensor protein YP_002537624.1 PFAM: response regulator receiver; KEGG: gur:Gura_3136 response regulator receiver protein YP_002537625.1 KEGG: gur:Gura_3135 hypothetical protein YP_002537626.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase YP_002537627.1 KEGG: gur:Gura_3133 hypothetical protein YP_002537628.1 TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta; KEGG: gur:Gura_3132 DNA polymerase III, delta subunit YP_002537629.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase YP_002537630.1 KEGG: gur:Gura_3130 hypothetical protein YP_002537631.1 KEGG: gur:Gura_3129 hypothetical protein YP_002537632.1 KEGG: ank:AnaeK_1036 hypothetical protein YP_002537633.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A) YP_002537634.1 PFAM: protein of unknown function DUF151; KEGG: gur:Gura_3126 hypothetical protein YP_002537635.1 PFAM: peptidase M20; peptidase M42 family protein; KEGG: gur:Gura_3125 peptidase M42 family protein YP_002537636.1 KEGG: gur:Gura_3124 inosine-5'-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: hypothetical protein; IMP dehydrogenase/GMP reductase YP_002537637.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway YP_002537638.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: gur:Gura_3122 HAD family hydrolase YP_002537639.1 PFAM: Anti-sigma-28 factor FlgM family protein; KEGG: gur:Gura_3121 hypothetical protein YP_002537640.1 PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: gur:Gura_1336 MerR family transcriptional regulator YP_002537641.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: gur:Gura_3040 acyl-CoA dehydrogenase domain-containing protein YP_002537642.1 PFAM: RES domain protein; KEGG: gur:Gura_2467 hypothetical protein YP_002537643.1 KEGG: gbm:Gbem_0059 hypothetical protein YP_002537644.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: gme:Gmet_3308 sigma-54 dependent trancsriptional regulator YP_002537645.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: gme:Gmet_3307 acyl-CoA dehydrogenase-like YP_002537646.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: gme:Gmet_3306 acyl-CoA dehydrogenase-like YP_002537647.1 KEGG: gme:Gmet_3303 hypothetical protein YP_002537648.1 KEGG: gme:Gmet_3298 hypothetical protein YP_002537649.1 PFAM: acetyl-CoA hydrolase/transferase; KEGG: gme:Gmet_3304 acetyl-CoA hydrolase/transferase YP_002537650.1 PFAM: GCN5-related N-acetyltransferase; acetyl-CoA hydrolase/transferase; KEGG: pat:Patl_1748 acetyl-CoA hydrolase/transferase YP_002537651.1 PFAM: histone deacetylase superfamily; KEGG: sfu:Sfum_0936 histone deacetylase superfamily YP_002537652.1 PFAM: AMP-dependent synthetase and ligase; KEGG: pth:PTH_1890 acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_002537653.1 KEGG: sat:SYN_00659 methyl-accepting chemotaxis protein YP_002537654.1 PFAM: CsbD family protein; KEGG: gur:Gura_2405 CsbD family protein YP_002537655.1 KEGG: glo:Glov_0815 hypothetical protein YP_002537656.1 PFAM: formylmethanofuran dehydrogenase subunit E region; KEGG: gbm:Gbem_1223 formylmethanofuran dehydrogenase subunit E-like protein YP_002537657.1 catalyzes the hydrolysis of pyrophosphate to phosphate YP_002537658.1 KEGG: gbm:Gbem_0826 hypothetical protein YP_002537659.1 PFAM: fatty acid hydroxylase; KEGG: gbm:Gbem_0827 fatty acid hydroxylase YP_002537660.1 KEGG: glo:Glov_0217 hypothetical protein YP_002537661.1 KEGG: glo:Glov_0197 hypothetical protein YP_002537662.1 PFAM: response regulator receiver; KEGG: rru:Rru_A1654 response regulator receiver domain-containing protein YP_002537663.1 KEGG: mac:MA1270 sensory transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002537664.1 KEGG: gur:Gura_2940 hypothetical protein YP_002537665.1 PFAM: LrgA family protein; KEGG: gme:Gmet_1205 LrgA YP_002537666.1 PFAM: LrgB family protein; KEGG: gme:Gmet_1204 LrgB-like protein YP_002537667.1 PFAM: shikimate kinase; KEGG: dol:Dole_3110 shikimate kinase YP_002537668.1 PFAM: regulatory protein ArsR; KEGG: gsu:GSU2952 ArsR family transcriptional regulator YP_002537669.1 TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: gme:Gmet_0520 arsenical-resistance protein ACR3 YP_002537670.1 PFAM: conserved hypothetical protein; KEGG: gbm:Gbem_3594 hypothetical protein YP_002537673.1 PFAM: PilT protein domain protein; KEGG: gsu:GSU2472 virulence associated protein C YP_002537674.1 PFAM: SpoVT/AbrB domain protein; KEGG: gsu:GSU2473 virulence associated protein B YP_002537675.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: gme:Gmet_0160 pyridoxamine 5'-phosphate oxidase-related, FMN-binding YP_002537676.1 KEGG: net:Neut_1626 hypothetical protein YP_002537677.1 KEGG: cti:RALTA_B0418 hypothetical protein YP_002537678.1 KEGG: bph:Bphy_6912 hypothetical protein YP_002537679.1 KEGG: bph:Bphy_6911 hypothetical protein YP_002537680.1 PFAM: aminotransferase class I and II; KEGG: cti:RALTA_B0421 8-amino-7-oxononanoate synthase YP_002537682.1 PFAM: TatD-related deoxyribonuclease; amidohydrolase; KEGG: cti:RALTA_B0423 metal-dependent hydrolase, amidohydrolase family YP_002537683.1 PFAM: sigma-54 factor interaction domain-containing protein; SMART: ATPase AAA; KEGG: net:Neut_1621 sigma-54 factor interaction domain-containing protein YP_002537684.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: gbm:Gbem_0511 xylose isomerase domain protein TIM barrel YP_002537685.1 KEGG: gbm:Gbem_0510 hypothetical protein YP_002537686.1 PFAM: histidine triad (HIT) protein; KEGG: sus:Acid_2826 histidine triad (HIT) protein YP_002537687.1 KEGG: ppd:Ppro_0099 metallophosphoesterase YP_002537688.1 PFAM: UspA domain protein; KEGG: gbm:Gbem_2112 UspA domain protein YP_002537689.1 PFAM: protein of unknown function DUF542 ScdA domain protein; Hemerythrin HHE cation binding domain protein; KEGG: ppd:Ppro_1206 hypothetical protein YP_002537690.1 KEGG: gbm:Gbem_0818 cytochrome c peroxidase YP_002537691.1 PFAM: formylmethanofuran dehydrogenase subunit E region; KEGG: pth:PTH_1484 formylmethanofuran dehydrogenase subunit E YP_002537692.1 SMART: ATPase AAA; KEGG: gur:Gura_1483 peptidoglycan binding domain-containing protein YP_002537693.1 KEGG: gur:Gura_1484 hypothetical protein YP_002537694.1 PFAM: protein of unknown function UPF0153; KEGG: gur:Gura_1485 hypothetical protein YP_002537695.1 KEGG: gur:Gura_1486 hypothetical protein YP_002537696.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase YP_002537697.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: gur:Gura_1334 two component transcriptional regulator YP_002537698.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gur:Gura_1335 integral membrane sensor signal transduction histidine kinase YP_002537699.1 KEGG: gur:Gura_1982 aspartyl protease-like protein YP_002537700.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: gur:Gura_3007 2-nitropropane dioxygenase, NPD YP_002537701.1 PFAM: extracellular solute-binding protein family 3; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gur:Gura_2115 integral membrane sensor signal transduction histidine kinase YP_002537702.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: ATPase AAA; KEGG: gur:Gura_2116 two component, sigma-54 specific, fis family transcriptional regulator YP_002537703.1 functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to DcuA; DcuA and DcuB function as independent and mutually redundant C4-dicarboxylate (aspartate, malate, fumarate and succinate) transporters YP_002537704.1 PFAM: regulatory protein ArsR; UbiE/COQ5 methyltransferase; methyltransferase type 11; methyltransferase type 12; KEGG: gur:Gura_3006 methyltransferase type 11 YP_002537705.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine YP_002537706.1 KEGG: gur:Gura_3004 protein-disulfide isomerase-like protein YP_002537707.1 PFAM: ferric-uptake regulator; KEGG: gur:Gura_3002 ferric uptake regulator family protein YP_002537708.1 TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; KEGG: gur:Gura_3001 ferrous iron transport protein B YP_002537709.1 KEGG: gur:Gura_3000 hypothetical protein YP_002537710.1 PFAM: iron dependent repressor; FeoA family protein; KEGG: gur:Gura_2999 iron dependent repressor YP_002537711.1 KEGG: gur:Gura_2997 hypothetical protein YP_002537712.1 KEGG: gur:Gura_2996 methyl-accepting chemotaxis sensory transducer YP_002537713.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: gur:Gura_2995 sulfate transporter/antisigma-factor antagonist STAS YP_002537714.1 PFAM: response regulator receiver; KEGG: gur:Gura_2994 response regulator receiver protein YP_002537715.1 PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: gur:Gura_2993 chemotaxis protein CheA YP_002537716.1 PFAM: chemotaxis sensory transducer; KEGG: gur:Gura_2992 methyl-accepting chemotaxis sensory transducer YP_002537717.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: gbm:Gbem_2944 methyl-accepting chemotaxis sensory transducer YP_002537718.1 KEGG: gur:Gura_2989 methyl-accepting chemotaxis sensory transducer; TIGRFAM: PAS sensor protein; PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002537719.1 KEGG: gur:Gura_2988 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; SMART: PAC repeat-containing protein YP_002537720.1 PFAM: CheW domain protein; KEGG: gur:Gura_2986 chemotaxis protein CheW YP_002537721.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: gbm:Gbem_3297 methyl-accepting chemotaxis sensory transducer YP_002537722.1 PFAM: CheW domain protein; KEGG: gur:Gura_2986 chemotaxis protein CheW YP_002537723.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: gur:Gura_2992 methyl-accepting chemotaxis sensory transducer YP_002537724.1 PFAM: MCP methyltransferase CheR-type; KEGG: gur:Gura_2984 protein-glutamate O-methyltransferase YP_002537725.1 PFAM: chemotaxis protein CheB; response regulator receiver; KEGG: gur:Gura_2982 response regulator receiver modulated chemotaxis protein CheB YP_002537726.1 PFAM: EAL domain protein; Metal-dependent hydrolase HDOD; KEGG: gur:Gura_2981 diguanylate phosphodiesterase YP_002537727.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS YP_002537728.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer YP_002537729.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis YP_002537730.1 KEGG: gur:Gura_2977 KpsF/GutQ family protein; TIGRFAM: KpsF/GutQ family protein; PFAM: hypothetical protein; sugar isomerase (SIS) YP_002537731.1 TIGRFAM: hydrolase, HAD-superfamily, subfamily IIIA; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; KEGG: gur:Gura_2976 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YP_002537732.1 PFAM: protein of unknown function DUF1239; KEGG: gur:Gura_2975 hypothetical protein YP_002537733.1 TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA family protein; KEGG: gur:Gura_2974 OstA family protein YP_002537734.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gur:Gura_2973 ABC transporter YP_002537735.1 TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor; sigma-54 factor core-binding region; sigma-54 DNA-binding domain protein; KEGG: gur:Gura_2972 RNA polymerase, sigma-54 subunit, RpoN YP_002537736.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: gur:Gura_2971 sigma-54 modulation protein/ribosomal protein S30EA YP_002537737.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: gur:Gura_2970 PTS IIA-like nitrogen-regulatory protein PtsN YP_002537738.1 catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system YP_002537739.1 PFAM: conserved hypothetical protein; KEGG: gur:Gura_2968 hypothetical protein YP_002537740.1 PFAM: PTS system fructose subfamily IIA component; KEGG: gur:Gura_2967 PTS system fructose subfamily IIA component YP_002537741.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: gur:Gura_2966 phosphotransferase system, phosphocarrier protein HPr YP_002537742.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: gur:Gura_2965 phosphoenolpyruvate-protein phosphotransferase YP_002537743.1 PFAM: purine or other phosphorylase family 1; KEGG: gur:Gura_2964 purine phosphorylase family 1 YP_002537744.1 KEGG: gur:Gura_2963 radical SAM domain-containing protein; TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnJ; PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB YP_002537745.1 TIGRFAM: hopanoid biosynthesis associated protein HpnK; PFAM: YdjC family protein; KEGG: gur:Gura_2962 YdjC family protein YP_002537746.1 KEGG: gur:Gura_2961 hypothetical protein YP_002537747.1 TIGRFAM: glutaredoxin-like protein, YruB-family; PFAM: glutaredoxin; KEGG: gur:Gura_2960 YruB family glutaredoxin-like protein YP_002537748.1 PFAM: PDZ/DHR/GLGF domain protein; KEGG: gur:Gura_2959 PDZ/DHR/GLGF domain-containing protein YP_002537749.1 catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_002537750.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis YP_002537752.1 KEGG: glo:Glov_2775 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase HAMP region domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002537753.1 PFAM: protein of unknown function DUF815; KEGG: gur:Gura_1644 hypothetical protein YP_002537754.1 KEGG: gur:Gura_1645 hypothetical protein YP_002537755.1 KEGG: gme:Gmet_2575 hypothetical protein YP_002537756.1 TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: gur:Gura_1651 tartrate/fumarate subfamily Fe-S type hydro-lyase beta subunit YP_002537757.1 KEGG: gur:Gura_1652 hypothetical protein YP_002537758.1 KEGG: gur:Gura_1653 hypothetical protein YP_002537759.1 KEGG: gur:Gura_3431 surface antigen msp4 family protein YP_002537760.1 KEGG: gur:Gura_1662 hypothetical protein YP_002537761.1 KEGG: gur:Gura_1663 hypothetical protein YP_002537762.1 TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: gbm:Gbem_4009 hemerythrin-like metal-binding protein YP_002537763.1 TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; methyltransferase type 11; methyltransferase type 12; KEGG: gur:Gura_1366 ubiquinone/menaquinone biosynthesis methyltransferase YP_002537764.1 PFAM: protein of unknown function DUF147; YbbR family protein; KEGG: gur:Gura_1367 hypothetical protein YP_002537765.1 PFAM: NLP/P60 protein; Peptidoglycan-binding LysM; KEGG: gur:Gura_1368 NLP/P60 protein YP_002537766.1 PFAM: hypothetical protein; cobalamin B12-binding domain protein; radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; hypothetical protein; KEGG: gur:Gura_1369 radical SAM domain-containing protein YP_002537767.1 KEGG: gur:Gura_1370 hypothetical protein YP_002537768.1 KEGG: gur:Gura_1371 AsmA family protein YP_002537769.1 KEGG: gur:Gura_1374 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002537770.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis YP_002537771.1 PFAM: ABC transporter; KEGG: gur:Gura_1388 hypothetical protein YP_002537772.1 KEGG: gur:Gura_1389 hypothetical protein YP_002537773.1 KEGG: gme:Gmet_0753 hypothetical protein YP_002537774.1 PFAM: protein of unknown function DUF208; KEGG: gur:Gura_1391 hypothetical protein YP_002537775.1 PFAM: protein of unknown function DUF101; KEGG: gur:Gura_1392 hypothetical protein YP_002537776.1 PFAM: protein of unknown function UPF0027; KEGG: gur:Gura_1393 hypothetical protein YP_002537777.1 PFAM: Chromosomal replication initiator DnaA; SMART: ATPase AAA; KEGG: gur:Gura_1412 chromosomal replication initiator, DnaA YP_002537778.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration YP_002537779.1 plays an essential role in ATP-dependent branch migration of the Holliday junction YP_002537780.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity YP_002537781.1 PFAM: protein of unknown function DUF28; KEGG: gur:Gura_1416 hypothetical protein YP_002537782.1 KEGG: gur:Gura_1417 hypothetical protein YP_002537783.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: gur:Gura_1418 regulatory protein, IclR YP_002537784.1 PFAM: protein of unknown function DUF485; KEGG: gur:Gura_1419 hypothetical protein YP_002537785.1 TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: glo:Glov_1397 SSS sodium solute transporter superfamily YP_002537786.1 PFAM: protein of unknown function DUF294 nucleotidyltransferase KEGG: gur:Gura_1421 protein of unknown function DUF294, nucleotidyltransferase YP_002537787.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Cache type 2 domain protein; KEGG: gur:Gura_1422 integral membrane sensor signal transduction histidine kinase YP_002537788.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: gur:Gura_1428 two component, sigma-54 specific, fis family transcriptional regulator YP_002537789.1 KEGG: gur:Gura_1429 hypothetical protein YP_002537791.1 KEGG: gur:Gura_1430 hypothetical protein YP_002537792.1 KEGG: gur:Gura_1431 hypothetical protein YP_002537793.1 KEGG: gur:Gura_1433 hypothetical protein YP_002537794.1 KEGG: gur:Gura_1434 hypothetical protein YP_002537795.1 KEGG: gur:Gura_1435 SAM-dependent methyltransferase-like protein YP_002537796.1 PFAM: SlyX family protein; KEGG: gur:Gura_1436 SlyX family protein YP_002537797.1 PFAM: aldo/keto reductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gur:Gura_1437 aldo/keto reductase YP_002537798.1 KEGG: gur:Gura_1445 hypothetical protein YP_002537799.1 PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: gur:Gura_1446 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_002537800.1 PFAM: Porphyromonas-type peptidyl-arginine deiminase; KEGG: gur:Gura_1447 agmatine deiminase YP_002537801.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP YP_002537802.1 KEGG: gme:Gmet_3515 hypothetical protein YP_002537803.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: gur:Gura_1450 Sel1 domain-containing protein YP_002537804.1 KEGG: gur:Gura_1451 hypothetical protein YP_002537805.1 PFAM: protein of unknown function DUF503; KEGG: gur:Gura_1452 hypothetical protein YP_002537806.1 PFAM: manganese and iron superoxide dismutase; KEGG: gur:Gura_1453 manganese and iron superoxide dismutase YP_002537807.1 TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: gur:Gura_1454 PfpI family intracellular peptidase YP_002537808.1 KEGG: gur:Gura_1455 hypothetical protein YP_002537809.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: gur:Gura_1456 RND family efflux transporter MFP subunit YP_002537810.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gur:Gura_1457 ABC transporter YP_002537811.1 PFAM: protein of unknown function DUF214; KEGG: gur:Gura_1458 hypothetical protein YP_002537812.1 PFAM: protein of unknown function DUF214; KEGG: gur:Gura_1459 hypothetical protein YP_002537813.1 KEGG: gur:Gura_1460 hypothetical protein YP_002537814.1 TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase; amino acid-binding ACT domain protein; KEGG: gur:Gura_1462 prephenate dehydratase YP_002537815.1 PFAM: Prephenate dehydrogenase; KEGG: gur:Gura_1463 prephenate dehydrogenase YP_002537816.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis YP_002537817.1 KEGG: gur:Gura_1465 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region YP_002537818.1 KEGG: gur:Gura_1466 hydroxymethylbutenyl pyrophosphate reductase; TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein YP_002537819.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins YP_002537820.1 PFAM: histone family protein DNA-binding protein; KEGG: gur:Gura_1468 histone family protein DNA-binding protein YP_002537821.1 PFAM: lipid A biosynthesis acyltransferase; KEGG: gbm:Gbem_0224 lipid A biosynthesis acyltransferase YP_002537822.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: gur:Gura_0546 hypothetical protein YP_002537824.1 KEGG: cpb:Cphamn1_2543 type I site-specific deoxyribonuclease, HsdR family YP_002537825.1 PFAM: protein of unknown function DUF45; KEGG: cpb:Cphamn1_2542 protein of unknown function DUF45 YP_002537826.1 KEGG: glo:Glov_3022 hypothetical protein YP_002537827.1 KEGG: gur:Gura_1220 ribonuclease H; PFAM: ribonuclease H; 5'-3' exonuclease; SMART: Helix-hairpin-helix domain protein class 2 YP_002537830.1 KEGG: hypothetical protein YP_002537831.1 KEGG: rci:RCIX562 hypothetical protein YP_002537832.1 KEGG: gbm:Gbem_3217 hypothetical protein YP_002537833.1 KEGG: gur:Gura_2823 hypothetical protein YP_002537834.1 KEGG: gur:Gura_2822 hypothetical protein YP_002537835.1 KEGG: gur:Gura_2821 hypothetical protein YP_002537836.1 KEGG: gur:Gura_2820 hypothetical protein YP_002537837.1 PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: gur:Gura_2819 diguanylate cyclase YP_002537838.1 KEGG: gur:Gura_2818 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase YP_002537839.1 KEGG: gur:Gura_2817 biotin--acetyl-CoA-carboxylase ligase; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; hypothetical protein YP_002537840.1 type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP YP_002537841.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene YP_002537842.1 PFAM: Sporulation domain protein; KEGG: gur:Gura_2814 sporulation domain-containing protein YP_002537843.1 KEGG: gur:Gura_2813 hypothetical protein YP_002537844.1 KEGG: gur:Gura_2812 hypothetical protein YP_002537845.1 PFAM: MgtC/SapB transporter; KEGG: gur:Gura_2811 MgtC/SapB transporter YP_002537846.1 PFAM: transport-associated; KEGG: gur:Gura_2809 transport-associated protein YP_002537847.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: gur:Gura_2808 phosphotransferase domain-containing protein YP_002537848.1 KEGG: gur:Gura_2807 hypothetical protein YP_002537849.1 PFAM: HhH-GPD family protein; KEGG: gur:Gura_2806 DNA-(apurinic or apyrimidinic site) lyase YP_002537850.1 PFAM: histidine kinase HAMP region domain protein; metal-dependent phosphohydrolase HD sub domain; Metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region; KEGG: gur:Gura_2803 metal dependent phosphohydrolase YP_002537851.1 KEGG: gur:Gura_2802 hypothetical protein YP_002537852.1 TIGRFAM: RNA methyltransferase, TrmA family; PFAM: (Uracil-5)-methyltransferase; Protein of unknown function methylase KEGG: gur:Gura_2801 RNA methyltransferase YP_002537853.1 converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer YP_002537854.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis YP_002537855.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro) YP_002537856.1 KEGG: gur:Gura_2797 orotidine 5'-phosphate decarboxylase; TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase YP_002537857.1 TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: gur:Gura_2796 RNA methyltransferase YP_002537858.1 PFAM: helix-turn-helix domain protein; KEGG: gme:Gmet_0315 XRE family transcriptional regulator YP_002537859.1 PFAM: protein of unknown function DUF891; KEGG: gbm:Gbem_2788 protein of unknown function DUF891 YP_002537860.1 KEGG: gme:Gmet_3281 transposase/IS protein YP_002537861.1 KEGG: gsu:GSU2593 ISGsu6, transposase OrfA YP_002537862.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: bcl:ABC3311 HAD superfamily hydrolase YP_002537865.1 PFAM: sodium/hydrogen exchanger; KEGG: mmi:MMAR_4262 hypothetical protein YP_002537866.1 PFAM: radical SAM protein; KEGG: kcr:Kcr_1025 radical SAM domain-containing protein YP_002537867.1 KEGG: hch:HCH_06534 hypothetical protein YP_002537868.1 PFAM: radical SAM protein; KEGG: tme:Tmel_0095 radical SAM domain-containing protein YP_002537869.1 KEGG: ppd:Ppro_0836 hypothetical protein YP_002537870.1 PFAM: NUDIX hydrolase; KEGG: cvi:CV_1405 hypothetical protein YP_002537871.1 KEGG: gur:Gura_3111 N-acyl-L-homoserine lactone synthetase-like protein YP_002537872.1 PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; KEGG: gur:Gura_3112 regulatory protein, LuxR YP_002537874.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: gme:Gmet_1521 L-carnitine dehydratase/bile acid-inducible protein F YP_002537875.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: gme:Gmet_1522 L-carnitine dehydratase/bile acid-inducible protein F YP_002537876.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: gme:Gmet_1523 acyl-CoA dehydrogenase-like YP_002537877.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: gme:Gmet_1524 short chain enoyl-CoA hydratase YP_002537878.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: gme:Gmet_1525 electron transfer flavoprotein subunit beta YP_002537879.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: gme:Gmet_1526 electron transfer flavoprotein subunit alpha YP_002537880.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: gme:Gmet_1527 hypothetical protein YP_002537881.1 PFAM: protein of unknown function DUF35; KEGG: gme:Gmet_1528 hypothetical protein YP_002537882.1 KEGG: gme:Gmet_1529 thiolase YP_002537883.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gme:Gmet_1530 short-chain dehydrogenase/reductase SDR YP_002537884.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gme:Gmet_1531 3-oxoacyl-[acyl-carrier-protein] reductase YP_002537886.1 PFAM: cyclic nucleotide-binding; KEGG: gme:Gmet_1532 cyclic nucleotide-binding domain-containing protein YP_002537887.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: gme:Gmet_1533 fumarate reductase/succinate dehydrogenase flavoprotein-like YP_002537888.1 KEGG: gme:Gmet_2107 signal peptide protein YP_002537889.1 PFAM: von Willebrand factor A; KEGG: gme:Gmet_1536 hypothetical protein YP_002537890.1 PFAM: ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: gme:Gmet_1537 ATPase YP_002537891.1 KEGG: gme:Gmet_1538 hypothetical protein YP_002537892.1 PFAM: formate C-acetyltransferase glycine radical; pyruvate formate-lyase PFL; KEGG: gme:Gmet_1539 formate C-acetyltransferase glycine radical:pyruvate formate-lyase, PFL YP_002537893.1 PFAM: benzylsuccinate synthase subunit gamma; KEGG: gme:Gmet_1540 hypothetical protein YP_002537894.1 KEGG: gme:Gmet_1541 glycyl-radical activating protein; TIGRFAM: glycyl-radical enzyme activating protein family; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; radical SAM protein YP_002537895.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; 4-vinyl reductase 4VR; Activator of aromatic catabolism; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: gme:Gmet_1542 Fis family transcriptional regulator YP_002537896.1 KEGG: psa:PST_0618 transporter YP_002537897.1 KEGG: psa:PST_0617 glycosyl hydrolase YP_002537898.1 PFAM: protein of unknown function DUF1329; KEGG: lch:Lcho_2163 hypothetical protein YP_002537899.1 PFAM: protein of unknown function DUF1302; KEGG: lch:Lcho_2162 hypothetical protein YP_002537900.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: cpf:CPF_0371 oxidoreductase YP_002537901.1 KEGG: gme:Gmet_1538 hypothetical protein YP_002537902.1 PFAM: formate C-acetyltransferase glycine radical; pyruvate formate-lyase PFL; KEGG: gme:Gmet_1539 formate C-acetyltransferase glycine radical:pyruvate formate-lyase, PFL YP_002537903.1 PFAM: benzylsuccinate synthase subunit gamma; KEGG: gme:Gmet_1540 hypothetical protein YP_002537904.1 KEGG: gme:Gmet_1541 glycyl-radical activating protein; TIGRFAM: glycyl-radical enzyme activating protein family; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; radical SAM protein YP_002537905.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; 4-vinyl reductase 4VR; Activator of aromatic catabolism; SMART: ATPase AAA; KEGG: gme:Gmet_1542 Fis family transcriptional regulator YP_002537906.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: gur:Gura_3895 BadM/Rrf2 family transcriptional regulator YP_002537907.1 TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: gur:Gura_3894 sulfate ABC transporter, periplasmic sulfate-binding protein YP_002537908.1 KEGG: gbm:Gbem_1724 hypothetical protein YP_002537909.1 PFAM: NifH/frxC-family protein; KEGG: gbm:Gbem_1731 NifH/FrxC-family protein YP_002537910.1 PFAM: radical SAM protein; KEGG: gur:Gura_1209 radical SAM domain-containing protein YP_002537911.1 KEGG: mta:Moth_1978 hypothetical protein YP_002537912.1 KEGG: dsy:DSY4011 nitrogenase subunit NifH; TIGRFAM: nitrogenase iron protein; PFAM: NifH/frxC-family protein YP_002537913.1 TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: gur:Gura_3859 cysteine synthase A YP_002537914.1 PFAM: oxidoreductase/nitrogenase component 1; KEGG: mbn:Mboo_2004 nitrogenase YP_002537915.1 PFAM: oxidoreductase/nitrogenase component 1; KEGG: mbn:Mboo_2010 nitrogenase YP_002537916.1 KEGG: eba:p2A399 transport protein YP_002537917.1 KEGG: nmu:Nmul_A0368 hypothetical protein YP_002537918.1 SMART: hypothetical protein; KEGG: scl:sce3387 glucosyltransferase-I precursor YP_002537919.1 KEGG: tde:TDE2009 hypothetical protein YP_002537920.1 PFAM: oxidoreductase/nitrogenase component 1; KEGG: mbn:Mboo_2004 nitrogenase YP_002537921.1 PFAM: oxidoreductase/nitrogenase component 1; KEGG: mbn:Mboo_2010 nitrogenase YP_002537922.1 KEGG: rpt:Rpal_2599 dinitrogenase iron-molybdenum cofactor biosynthesis protein YP_002537923.1 KEGG: aau:AAur_0107 integral membrane protein YP_002537924.1 KEGG: cbe:Cbei_0616 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein YP_002537925.1 KEGG: gur:Gura_2449 alkylhydroperoxidase YP_002537926.1 PFAM: UbiE/COQ5 methyltransferase; methyltransferase type 11; methyltransferase type 12; KEGG: sfu:Sfum_1190 methyltransferase type 11 YP_002537927.1 KEGG: gsu:GSU0852 lipoprotein YP_002537928.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: gme:Gmet_2441 cobalamin (vitamin B12) biosynthesis CbiM protein YP_002537929.1 TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: gme:Gmet_2440 cobalt ABC transporter CbiQ, permease subunit YP_002537930.1 KEGG: gsu:GSU1281 cobalt ABC transporter, ATP-binding protein; TIGRFAM: cobalt ABC transporter, ATPase subunit; PFAM: ABC transporter; SMART: ATPase AAA YP_002537931.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: gbm:Gbem_2165 efflux transporter, RND family, MFP subunit YP_002537932.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: gme:Gmet_1547 heavy metal efflux pump CzcA YP_002537933.1 KEGG: sus:Acid_2050 DNA uptake protein and related DNA-binding protein-like protein YP_002537936.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gur:Gura_0481 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002537937.1 KEGG: gur:Gura_0480 CO dehydrogenase/acetyl-CoA synthase gamma subunit (corrinoid Fe-S protein)-like protein YP_002537938.1 PFAM: regulatory protein MarR; KEGG: gur:Gura_0479 MarR family transcriptional regulator YP_002537939.1 TIGRFAM: C_GCAxxG_C_C family protein; KEGG: ppd:Ppro_2887 C_GCAxxG_C_C family protein YP_002537941.1 KEGG: sus:Acid_7512 outer membrane efflux protein YP_002537942.1 KEGG: pca:Pcar_1719 cystathionine gamma-synthase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase YP_002537943.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mbn:Mboo_2012 binding-protein-dependent transport systems inner membrane component YP_002537944.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ckl:CKL_1037 ABC transporter permease YP_002537945.1 PFAM: oxidoreductase/nitrogenase component 1; KEGG: mbn:Mboo_2010 nitrogenase YP_002537946.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gur:Gura_3876 ABC transporter YP_002537947.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ckl:CKL_1040 ABC transporter permease YP_002537948.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ckl:CKL_1041 ABC transporter permease YP_002537949.1 KEGG: glo:Glov_1477 hypothetical protein YP_002537950.1 KEGG: cyt:cce_4809 hypothetical protein YP_002537951.1 PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: ckl:CKL_2783 NifB-related protein YP_002537952.1 PFAM: Uroporphyrinogen decarboxylase (URO-D); KEGG: swo:Swol_0417 uroporphyrinogen decarboxylase YP_002537953.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: cbe:Cbei_0622 cysteine synthase YP_002537954.1 PFAM: oxidoreductase/nitrogenase component 1; KEGG: ckl:CKL_0825 hypothetical protein YP_002537955.1 PFAM: oxidoreductase/nitrogenase component 1; KEGG: ckl:CKL_0826 NifK1 YP_002537956.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cpy:Cphy_1400 GCN5-related N-acetyltransferase YP_002537957.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: reh:H16_A3691 threonine efflux protein YP_002537958.1 PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: syf:Synpcc7942_0963 methyltransferase YP_002537959.1 PFAM: aminotransferase class I and II; KEGG: gbm:Gbem_0056 aminotransferase class I and II YP_002537960.1 PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: sfu:Sfum_2808 aminotransferase, class V YP_002537961.1 TIGRFAM: selenide, water dikinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: pth:PTH_1848 selenophosphate synthase YP_002537962.1 PFAM: UbiE/COQ5 methyltransferase; methyltransferase type 11; methyltransferase type 12; KEGG: aba:Acid345_0798 UbiE/COQ5 methyltransferase YP_002537963.1 PFAM: nitroreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gur:Gura_2435 nitroreductase YP_002537964.1 PFAM: conserved hypothetical protein; KEGG: gbm:Gbem_3594 hypothetical protein YP_002537965.1 TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: gur:Gura_3419 magnesium and cobalt transport protein CorA YP_002537966.1 PFAM: type IV pilus assembly PilZ; KEGG: pca:Pcar_1964 response regulator CheY YP_002537967.1 PFAM: phosphoenolpyruvate carboxylase; KEGG: gme:Gmet_0304 phosphoenolpyruvate carboxylase YP_002537968.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: ajs:Ajs_1889 alcohol dehydrogenase YP_002537969.1 KEGG: aoe:Clos_1062 hypothetical protein YP_002537970.1 PFAM: helix-turn-helix domain protein; KEGG: mag:amb2064 transcriptional regulator YP_002537971.1 KEGG: spe:Spro_0109 hypothetical protein YP_002537972.1 KEGG: ppd:Ppro_3640 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_002537973.1 PFAM: cupin; KEGG: gbm:Gbem_2856 cupin 2 conserved barrel domain protein YP_002537974.1 PFAM: SpoVT/AbrB domain protein; KEGG: afl:Aflv_1613 SpoVT/AbrB-like cell growth regulatory protein YP_002537975.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: sfu:Sfum_1291 transcriptional regulator, BadM/Rrf2 family YP_002537976.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: rru:Rru_A1066 ABC transporter component YP_002537977.1 PFAM: cobalamin synthesis protein P47K; KEGG: rru:Rru_A1067 cobalamin synthesis protein/P47K YP_002537978.1 PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rru:Rru_A1068 aminotransferase, class V YP_002537979.1 PFAM: Fe-S cluster domain protein; KEGG: rru:Rru_A1069 Fe-S cluster YP_002537980.1 TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; KEGG: gme:Gmet_1946 glyceraldehyde-3-phosphate dehydrogenase YP_002537981.1 PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: cbe:Cbei_0627 dinitrogenase iron-molybdenum cofactor biosynthesis protein YP_002537982.1 TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: pth:PTH_0247 cysteine synthase YP_002537983.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: azo:azo2392 sulfonate transport system, ATP-binding protein YP_002537984.1 KEGG: cth:Cthe_2789 NlpA lipoprotein YP_002537985.1 PFAM: NMT1/THI5 like domain protein; SMART: extracellular solute-binding protein family 3; KEGG: cth:Cthe_2789 NlpA lipoprotein YP_002537986.1 SMART: extracellular solute-binding protein family 3; KEGG: cth:Cthe_2789 NlpA lipoprotein YP_002537987.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cth:Cthe_2791 binding-protein-dependent transport systems inner membrane component YP_002537988.1 PFAM: extracellular solute-binding protein family 3; Substrate-binding region of ABC-type glycine betaine transport system; NMT1/THI5 like domain protein; KEGG: cth:Cthe_2789 NlpA lipoprotein YP_002537989.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azo:azo2393 sulfonate transport system, permease protein YP_002537990.1 KEGG: gsu:GSU0774 iron-sulfur cluster-binding protein YP_002537991.1 PFAM: oxidoreductase/nitrogenase component 1; KEGG: dsy:DSY4009 nitrogenase iron-molybdenum protein alpha chain YP_002537992.1 PFAM: oxidoreductase/nitrogenase component 1; KEGG: dsy:DSY4010 nitrogenase iron-molybdenum protein beta chain YP_002537993.1 PFAM: methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; KEGG: cth:Cthe_2784 cobalamin B12-binding protein YP_002537994.1 PFAM: Uroporphyrinogen decarboxylase (URO-D); KEGG: cth:Cthe_2785 MtaA/CmuA family methyltransferase YP_002537995.1 catalyze the formation of methyl-coenzyme M from methylcobalamin and coenzyme M YP_002537996.1 PFAM: ferredoxin; KEGG: cth:Cthe_2787 ferredoxin YP_002537997.1 KEGG: ppd:Ppro_0446 hypothetical protein YP_002537998.1 PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: gbm:Gbem_0182 GreA/GreB family elongation factor YP_002537999.1 PFAM: protein of unknown function UPF0270; KEGG: glo:Glov_0235 protein of unknown function UPF0270 YP_002538000.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: gsu:GSU0264 Bcr/CflA subfamily drug resistance transporter YP_002538001.1 KEGG: ppd:Ppro_1979 hypothetical protein YP_002538002.1 KEGG: gur:Gura_0086 hypothetical protein YP_002538004.1 PFAM: Heavy metal transport/detoxification protein; KEGG: gme:Gmet_1556 heavy metal transport/detoxification protein YP_002538005.1 PFAM: Heavy metal transport/detoxification protein; KEGG: gme:Gmet_1555 heavy metal transport/detoxification protein YP_002538006.1 KEGG: gme:Gmet_1554 hypothetical protein YP_002538007.1 PFAM: protein of unknown function DUF214; KEGG: gur:Gura_0082 hypothetical protein YP_002538008.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gur:Gura_0083 ABC transporter YP_002538009.1 KEGG: mrd:Mrad2831_5228 multi-sensor hybrid histidine kinase YP_002538010.1 TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: gme:Gmet_3114 flagellar basal-body rod protein FlgC YP_002538011.1 PFAM: Peptidase M23; KEGG: ppd:Ppro_3645 peptidase M23B YP_002538012.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gur:Gura_0084 integral membrane sensor signal transduction histidine kinase YP_002538013.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: gur:Gura_0085 two component, sigma-54 specific, fis family transcriptional regulator YP_002538014.1 PFAM: outer membrane efflux protein; KEGG: ppd:Ppro_3648 outer membrane efflux protein YP_002538015.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: ppd:Ppro_3649 RND family efflux transporter MFP subunit YP_002538016.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: ppd:Ppro_3650 CzcA family heavy metal efflux protein YP_002538017.1 KEGG: gbm:Gbem_2163 hypothetical protein YP_002538018.1 KEGG: ppd:Ppro_3653 hypothetical protein YP_002538019.1 KEGG: ppd:Ppro_3654 hypothetical protein YP_002538020.1 KEGG: ppd:Ppro_3655 hypothetical protein YP_002538021.1 SMART: TRASH domain protein; KEGG: ppd:Ppro_3657 YHS domain-containing protein YP_002538022.1 KEGG: gur:Gura_0078 hypothetical protein YP_002538023.1 KEGG: gur:Gura_0078 hypothetical protein YP_002538024.1 PFAM: DEAD/DEAH box helicase; SMART: Helicase-like, DEXD box c2 type; helicase c2; DEAD/DEAH box helicases; KEGG: gur:Gura_2112 DEAD_2 domain-containing protein YP_002538025.1 in methanococcus jannaschii this protein catalyzes the condensation of alpha-ketoglutarate and acetyl-CoA to form trans-homoaconitate; functions in alphaketosuberate synthesis which is a precursor in coenzyme B and biotin synthesis YP_002538026.1 KEGG: gur:Gura_1175 nitrogenase iron protein; TIGRFAM: nitrogenase iron protein; PFAM: NifH/frxC-family protein YP_002538027.1 KEGG: gbm:Gbem_2075 nitrogenase molybdenum-iron protein alpha chain; TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase component 1 YP_002538029.1 KEGG: gur:Gura_1177 nitrogenase molybdenum-iron protein beta chain; TIGRFAM: nitrogenase molybdenum-iron protein beta chain; PFAM: oxidoreductase/nitrogenase component 1 YP_002538031.1 PFAM: Di-haem cytochrome c peroxidase; KEGG: afw:Anae109_2760 cytochrome c peroxidase family protein YP_002538032.1 PFAM: multicopper oxidase type 1; multicopper oxidase type 2; multicopper oxidase type 3; KEGG: gme:Gmet_2154 twin-arginine translocation pathway signal YP_002538033.1 in some organisms the NifE and NifN proteins are encoded separately; functions in assembly of FeMo cofactor; functions in assembly of nitrogenase MoFe YP_002538034.1 TIGRFAM: nitrogen fixation protein NifX; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: gur:Gura_1202 nitrogen fixation protein NifX YP_002538035.1 TIGRFAM: ferredoxin III, nif-specific; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gur:Gura_1203 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002538036.1 PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: gur:Gura_1204 dinitrogenase iron-molybdenum cofactor biosynthesis protein YP_002538037.1 PFAM: Dinitrogenase reductase ADP-ribosyltransferase; KEGG: gur:Gura_1205 NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase YP_002538039.1 KEGG: amt:Amet_2378 hypothetical protein YP_002538040.1 KEGG: gur:Gura_1208 ADP-ribosyl-(dinitrogen reductase) hydrolase; TIGRFAM: ADP-ribosyl-[dinitrogen reductase] hydrolase; PFAM: ADP-ribosylation/Crystallin J1 YP_002538041.1 KEGG: gbm:Gbem_2229 hypothetical protein YP_002538042.1 PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: gur:Gura_1209 radical SAM domain-containing protein YP_002538043.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gur:Gura_1210 GCN5-related N-acetyltransferase YP_002538044.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: gur:Gura_3394 methyl-accepting chemotaxis sensory transducer YP_002538045.1 PFAM: acetyl-CoA hydrolase/transferase; KEGG: glo:Glov_3013 acetyl-CoA hydrolase YP_002538046.1 PFAM: regulatory protein TetR; KEGG: gme:Gmet_1731 TetR family transcriptional regulator YP_002538047.1 PFAM: Fibronectin type III domain protein; KEGG: gbm:Gbem_1080 fibronectin type III domain protein YP_002538048.1 PFAM: penicillin-binding protein transpeptidase; KEGG: gbm:Gbem_0580 penicillin-binding protein transpeptidase YP_002538049.1 KEGG: scl:sce3103 secreted protein YP_002538050.1 KEGG: gbm:Gbem_0142 hypothetical protein YP_002538051.1 PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; KEGG: ppd:Ppro_2317 LuxR family transcriptional regulator YP_002538052.1 PFAM: ribonuclease BN; KEGG: gbm:Gbem_0137 ribonuclease BN YP_002538053.1 PFAM: thioesterase; KEGG: gur:Gura_0782 thioesterase YP_002538054.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: PAS domain containing protein; ATPase AAA; KEGG: gme:Gmet_3285 sigma-54 dependent trancsriptional regulator YP_002538055.1 PFAM: acetyl-CoA hydrolase/transferase; KEGG: gme:Gmet_2054 acetyl-CoA hydrolase/transferase YP_002538057.1 PFAM: GAF domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: gur:Gura_2045 GAF sensor protein YP_002538058.1 catalyzes branch migration in Holliday junction intermediates YP_002538059.1 TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Proline dehydrogenase; Aldehyde Dehydrogenase; KEGG: gur:Gura_1871 delta-1-pyrroline-5-carboxylate dehydrogenase YP_002538060.1 PFAM: protein of unknown function DUF177; KEGG: gur:Gura_1872 hypothetical protein YP_002538061.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not YP_002538062.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY YP_002538063.1 KEGG: gur:Gura_1875 3-oxoacyl-(acyl-carrier-protein) synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YP_002538064.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: gur:Gura_1876 malonyl CoA-acyl carrier protein transacylase YP_002538065.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gur:Gura_1877 3-oxoacyl-(acyl-carrier-protein) reductase YP_002538066.1 carries the fatty acid chain in fatty acid biosynthesis YP_002538067.1 TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase; KEGG: gur:Gura_1879 beta-ketoacyl synthase YP_002538068.1 TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase; KEGG: gur:Gura_1880 RpiB/LacA/LacB family sugar-phosphate isomerase YP_002538069.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate YP_002538070.1 KEGG: gur:Gura_1884 hypothetical protein YP_002538071.1 TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; PFAM: beta-lactamase domain protein; ComEC/Rec2-related protein; KEGG: gur:Gura_1885 DNA internalization-related competence protein ComEC/Rec2 YP_002538072.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: gur:Gura_1886 diguanylate cyclase YP_002538073.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG YP_002538074.1 PFAM: acyl-ACP thioesterase; KEGG: ppd:Ppro_3236 acyl-ACP thioesterase YP_002538075.1 PFAM: protein of unknown function DUF610 YibQ; KEGG: gur:Gura_1888 protein of unknown function DUF610, YibQ YP_002538076.1 KEGG: gur:Gura_1889 ATPase involved in chromosome partitioning-like protein YP_002538077.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides YP_002538078.1 catalyzes the bidirectional exonucleolytic cleavage of DNA YP_002538079.1 PFAM: Polyprenyl synthetase; KEGG: gur:Gura_2176 polyprenyl synthetase YP_002538080.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate YP_002538081.1 PFAM: hypothetical protein; hypothetical protein; SMART: hypothetical protein; KEGG: gur:Gura_2173 hypothetical protein YP_002538082.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: gur:Gura_2164 BadM/Rrf2 family transcriptional regulator YP_002538084.1 TIGRFAM: trigger factor; PFAM: peptidylprolyl isomerase FKBP-type; trigger factor domain protein; trigger factor domain; KEGG: gur:Gura_1914 trigger factor YP_002538085.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates YP_002538086.1 binds and unfolds substrates as part of the ClpXP protease YP_002538087.1 KEGG: gur:Gura_1917 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; ATPase AAA; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA YP_002538088.1 PFAM: glycosyl transferase family 2; KEGG: gur:Gura_1919 dolichyl-phosphate beta-D-mannosyltransferase YP_002538089.1 KEGG: gbm:Gbem_1277 hypothetical protein YP_002538090.1 PFAM: NHL repeat containing protein; KEGG: gur:Gura_1920 NHL repeat-containing protein YP_002538091.1 KEGG: gur:Gura_1921 hypothetical protein YP_002538092.1 PFAM: multihaem cytochrome; KEGG: gur:Gura_1922 hypothetical protein YP_002538093.1 PFAM: type II secretion system protein; KEGG: gur:Gura_1923 type II secretion system protein YP_002538094.1 PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: gur:Gura_1924 type II secretion system protein E YP_002538095.1 KEGG: gur:Gura_1925 Tfp pilus assembly protein ATPase PilM-like protein YP_002538096.1 PFAM: Fimbrial assembly family protein; KEGG: gur:Gura_1926 fimbrial assembly family protein YP_002538097.1 KEGG: gur:Gura_1927 hypothetical protein YP_002538098.1 KEGG: gur:Gura_1928 hypothetical protein YP_002538099.1 PFAM: hypothetical protein; cellulosome anchoring protein cohesin region; type II and III secretion system protein; NolW domain protein; SMART: hypothetical protein; KEGG: gur:Gura_1929 type II and III secretion system protein YP_002538100.1 KEGG: gur:Gura_1930 hypothetical protein YP_002538101.1 PFAM: type II secretion system protein G; KEGG: gur:Gura_1931 type II secretion system protein G YP_002538102.1 KEGG: gur:Gura_1932 cell division ATP-binding protein FtsE; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter; SMART: ATPase AAA YP_002538103.1 PFAM: protein of unknown function DUF214; KEGG: gur:Gura_1933 hypothetical protein YP_002538104.1 PFAM: Peptidase M23; KEGG: gur:Gura_1934 peptidase M23B YP_002538105.1 KEGG: gur:Gura_1935 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41 YP_002538106.1 KEGG: gur:Gura_1937 Ig domain-containing protein YP_002538107.1 KEGG: gur:Gura_1938 hypothetical protein YP_002538108.1 catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate YP_002538109.1 KEGG: gur:Gura_2206 hypothetical protein YP_002538110.1 TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: ppd:Ppro_2031 twitching motility protein YP_002538111.1 KEGG: ppd:Ppro_2030 response regulator receiver protein YP_002538112.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes YP_002538113.1 PFAM: Peptidoglycan-binding LysM; KEGG: gur:Gura_2195 peptidoglycan-binding LysM YP_002538114.1 KEGG: gur:Gura_2194 isocitrate dehydrogenase, NADP-dependent; TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate dehydrogenase NADP-dependent monomeric type YP_002538115.1 Catalyzes the reversible oxidation of malate to oxaloacetate YP_002538116.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gur:Gura_2192 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002538117.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: gur:Gura_2191 2-oxoglutarate ferredoxin oxidoreductase subunit alpha YP_002538118.1 catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin YP_002538119.1 PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: gur:Gura_2189 pyruvate ferredoxin/flavodoxin oxidoreductase YP_002538120.1 KEGG: gur:Gura_2188 metal dependent phosphohydrolase YP_002538121.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: gur:Gura_2188 metal dependent phosphohydrolase YP_002538122.1 KEGG: gur:Gura_2187 hypothetical protein YP_002538123.1 KEGG: gur:Gura_2186 hypothetical protein YP_002538124.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: gur:Gura_2185 dCMP deaminase YP_002538125.1 PFAM: ATP-cone domain protein; KEGG: gur:Gura_2184 transcriptional regulator NrdR YP_002538126.1 TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein; KEGG: gur:Gura_2183 riboflavin biosynthesis protein RibD YP_002538127.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine YP_002538128.1 KEGG: gur:Gura_2181 GTP cyclohydrolase II; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II YP_002538129.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not YP_002538130.1 TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: gur:Gura_2179 NusB antitermination factor YP_002538131.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine YP_002538132.1 KEGG: gbm:Gbem_3869 hypothetical protein YP_002538133.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: gur:Gura_1891 hydrolase YP_002538134.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine YP_002538135.1 PFAM: hypothetical protein; hypothetical protein; SMART: hypothetical protein; KEGG: gur:Gura_1893 hypothetical protein YP_002538136.1 PFAM: Mammalian cell entry related domain protein; KEGG: gur:Gura_1894 hypothetical protein YP_002538137.1 KEGG: gur:Gura_1895 ABC-type transport system involved in resistance to organic solvents ATPase component-like protein YP_002538138.1 PFAM: protein of unknown function DUF140; KEGG: gur:Gura_1896 hypothetical protein YP_002538139.1 PFAM: beta-lactamase domain protein; KEGG: gur:Gura_1897 beta-lactamase domain-containing protein YP_002538140.1 PFAM: protein of unknown function DUF150; KEGG: gur:Gura_1898 hypothetical protein YP_002538141.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination YP_002538142.1 PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; protein of unknown function DUF448; KEGG: gur:Gura_1900 hypothetical protein YP_002538143.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex YP_002538144.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock YP_002538145.1 PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: gur:Gura_1903 phosphoesterase domain-containing protein YP_002538146.1 TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: gur:Gura_1904 tRNA pseudouridine synthase B YP_002538147.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence YP_002538148.1 KEGG: gur:Gura_1906 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH type 1 domain protein; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; SMART: KH domain protein YP_002538149.1 PFAM: peptidase M16 domain protein; KEGG: gur:Gura_1907 peptidase M16 domain-containing protein YP_002538150.1 catalyzes the formation of dUMP from dUTP YP_002538151.1 PFAM: peptidase M29 aminopeptidase II; KEGG: gur:Gura_1909 peptidase M29, aminopeptidase II YP_002538152.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; KEGG: gur:Gura_1910 SUA5/YciO/YrdC/YwlC family protein YP_002538153.1 KEGG: gur:Gura_1911 hypothetical protein YP_002538155.1 TIGRFAM: cytochrome C family protein; PFAM: multihaem cytochrome; KEGG: gur:Gura_0077 cytochrome c family protein YP_002538156.1 KEGG: gbm:Gbem_1138 hypothetical protein YP_002538157.1 PFAM: protein of unknown function DUF107; KEGG: gur:Gura_3436 hypothetical protein YP_002538158.1 PFAM: band 7 protein; KEGG: gur:Gura_3437 band 7 protein YP_002538159.1 KEGG: scl:sce0229 hypothetical protein YP_002538160.1 KEGG: rpt:Rpal_2516 hypothetical protein YP_002538161.1 KEGG: sse:Ssed_3750 serine protease YP_002538162.1 KEGG: sse:Ssed_3749 hypothetical protein YP_002538163.1 PFAM: Domain of unknown function DUF1863; KEGG: bba:Bd1459 hypothetical protein YP_002538164.1 KEGG: mms:mma_2729 hypothetical protein YP_002538165.1 KEGG: rec:RHECIAT_PB0000012 nucleoside 2-deoxyribosyltransferase protein YP_002538166.1 KEGG: afw:Anae109_3998 hypothetical protein YP_002538167.1 KEGG: rec:RHECIAT_PB0000014 N-glycosylase/DNA lyase protein, HhH-GPD family YP_002538168.1 PFAM: ExsB family protein; KEGG: rec:RHECIAT_PB0000015 probable succinoglycan biosynthesis transcriptional regulator protein YP_002538169.1 PFAM: Domain of unknown function DUF1863; KEGG: rec:RHECIAT_PB0000016 hypothetical protein YP_002538170.1 KEGG: afw:Anae109_3999 TIR protein YP_002538171.1 KEGG: gsu:GSU1546 hypothetical protein YP_002538172.1 KEGG: xau:Xaut_3745 hypothetical protein YP_002538173.1 PFAM: protein of unknown function DUF167; KEGG: gur:Gura_2104 hypothetical protein YP_002538174.1 TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: gur:Gura_1216 XRE family plasmid maintenance system antidote protein YP_002538175.1 PFAM: plasmid maintenance system killer; KEGG: rru:Rru_A2020 plasmid maintenance system killer YP_002538176.1 KEGG: sus:Acid_2819 hypothetical protein YP_002538177.1 KEGG: gbm:Gbem_1920 hypothetical protein YP_002538179.1 KEGG: gme:Gmet_1385 hypothetical protein YP_002538180.1 PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: gme:Gmet_1384 cytochrome c biogenesis protein, transmembrane region YP_002538181.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: gme:Gmet_1383 thioredoxin family protein YP_002538182.1 PFAM: arylsulfotransferase; KEGG: gme:Gmet_1382 arylsulfotransferase YP_002538183.1 KEGG: gme:Gmet_1381 disulfide oxidoreductase YP_002538184.1 PFAM: DSBA oxidoreductase; KEGG: gme:Gmet_1380 DsbA oxidoreductase YP_002538185.1 PFAM: ATP-binding region ATPase domain protein; KEGG: gme:Gmet_1379 histidine kinase YP_002538186.1 PFAM: response regulator receiver; KEGG: gme:Gmet_1378 response regulator receiver domain-containing protein YP_002538187.1 PFAM: protein of unknown function DUF167; KEGG: gur:Gura_2104 hypothetical protein YP_002538188.1 KEGG: aba:Acid345_1797 hypothetical protein YP_002538189.1 PFAM: protein of unknown function DUF1579; KEGG: fjo:Fjoh_0974 hypothetical protein YP_002538193.1 TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: pna:Pnap_0753 CDP-diacylglycerol--serine O-phosphatidyltransferase YP_002538195.1 PFAM: protein of unknown function DUF124; KEGG: mbu:Mbur_0308 hypothetical protein YP_002538196.1 PFAM: carbon starvation protein CstA; KEGG: ppd:Ppro_2158 carbon starvation protein CstA YP_002538197.1 PFAM: helicase domain protein; DEAD/DEAH box helicase; SMART: DEAD/DEAH box helicases; KEGG: gur:Gura_1974 DEAD/DEAH box helicase domain-containing protein YP_002538198.1 KEGG: cpb:Cphamn1_1085 hypothetical protein YP_002538199.1 PFAM: NLP/P60 protein; KEGG: gur:Gura_1368 NLP/P60 protein YP_002538200.1 TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: sus:Acid_0875 PfpI family intracellular peptidase YP_002538201.1 KEGG: cts:Ctha_1971 hypothetical protein YP_002538202.1 KEGG: gbm:Gbem_0539 hypothetical protein YP_002538203.1 KEGG: gbm:Gbem_0538 hypothetical protein YP_002538205.1 TIGRFAM: methyltransferase FkbM family; KEGG: ter:Tery_1754 FkbM family methyltransferase YP_002538206.1 PFAM: protein of unknown function DUF188; KEGG: gme:Gmet_1725 hypothetical protein YP_002538207.1 catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages YP_002538208.1 PFAM: MscS Mechanosensitive ion channel; KEGG: pca:Pcar_1009 small-conductance mechanosensitive channel YP_002538209.1 PFAM: Entericidin EcnAB; KEGG: gbm:Gbem_1394 entericidin EcnAB YP_002538210.1 PFAM: nuclease (SNase domain protein); KEGG: ppd:Ppro_3663 nuclease YP_002538211.1 This protein performs the mismatch recognition step during the DNA repair process YP_002538212.1 PFAM: cell wall hydrolase/autolysin; KEGG: gur:Gura_2385 N-acetylmuramoyl-L-alanine amidase YP_002538213.1 KEGG: gur:Gura_2384 metal dependent phosphohydrolase; TIGRFAM: protein-P-II uridylyltransferase; PFAM: amino acid-binding ACT domain protein; DNA polymerase beta domain protein region; metal-dependent phosphohydrolase HD sub domain; GlnD PII-uridylyltransferase; SMART: metal-dependent phosphohydrolase HD region YP_002538214.1 TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: gur:Gura_2383 tyrosine recombinase XerD YP_002538215.1 catalyzes the interconversion of 3-phosphoglycerate and 2-phosphoglycerate; this enzyme does not require the cofactor 2,3-bisphosphoglycerate as a phosphate donor; BPG-independent PGAM; aPGAM YP_002538216.1 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate YP_002538217.1 KEGG: gur:Gura_2377 hypothetical protein YP_002538218.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: gur:Gura_2375 two component, sigma-54 specific, fis family transcriptional regulator YP_002538219.1 PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: gur:Gura_2374 response regulator receiver modulated metal dependent phosphohydrolase YP_002538220.1 KEGG: gur:Gura_2373 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002538221.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: gme:Gmet_1651 secretion protein HlyD YP_002538222.1 PFAM: acriflavin resistance protein; KEGG: gme:Gmet_1652 acriflavin resistance protein YP_002538223.1 KEGG: gur:Gura_2370 hypothetical protein YP_002538224.1 KEGG: gur:Gura_2369 flagellar protein FhlB-like protein YP_002538225.1 KEGG: gur:Gura_2155 hypothetical protein YP_002538226.1 TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; KEGG: gur:Gura_2154 phosphoribosylglycinamide formyltransferase YP_002538227.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis YP_002538228.1 TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: gur:Gura_2152 ribosomal-protein-alanine acetyltransferase YP_002538229.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: gur:Gura_2151 oxidoreductase FAD/NAD(P)-binding subunit YP_002538230.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway, using a flavin nucleotide as an essential cofactor; subclass 1B is a heterotetramer consisting of two PyrDB subunits, similar to the PyrDA subunits and two PyrK subunits YP_002538231.1 KEGG: gur:Gura_2149 lysine 2,3-aminomutase YodO family protein; TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: radical SAM protein YP_002538232.1 PFAM: tRNA synthetase class II (D K and N); KEGG: gur:Gura_2148 tRNA synthetase, class II (D, K and N) YP_002538233.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA YP_002538234.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3 YP_002538235.1 KEGG: gur:Gura_2145 hypothetical protein YP_002538236.1 TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; methyltransferase small; (Uracil-5)-methyltransferase; KEGG: gur:Gura_2144 RNA methyltransferase YP_002538237.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: gur:Gura_2143 hypothetical protein YP_002538238.1 PFAM: histone family protein DNA-binding protein; KEGG: gur:Gura_2142 histone family protein DNA-binding protein YP_002538239.1 PFAM: OmpA/MotB domain protein; KEGG: gur:Gura_2141 OmpA/MotB domain-containing protein YP_002538240.1 KEGG: gur:Gura_2140 hypothetical protein YP_002538241.1 KEGG: gur:Gura_2139 hypothetical protein YP_002538242.1 PFAM: Na+/Picotransporter; PhoU family protein; KEGG: gur:Gura_2138 Na+/Pi-cotransporter YP_002538243.1 PFAM: Ppx/GppA phosphatase; KEGG: gur:Gura_2137 Ppx/GppA phosphatase YP_002538244.1 TIGRFAM: indolepyruvate ferredoxin oxidoreductase, alpha subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; thiamine pyrophosphate protein domain protein TPP-binding; KEGG: gur:Gura_2135 thiamine pyrophosphate binding domain-containing protein YP_002538245.1 Involved in the incorporation of exogenous aryl acids in the biosynthesis of aromatic amino acids: catalysis of the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. YP_002538246.1 KEGG: gur:Gura_2133 phenylacetate--CoA ligase YP_002538247.1 PFAM: amino acid-binding ACT domain protein; KEGG: gur:Gura_2132 amino acid-binding ACT domain-containing protein YP_002538248.1 PFAM: Extracellular ligand-binding receptor; KEGG: gur:Gura_2131 extracellular ligand-binding receptor YP_002538249.1 PFAM: Extracellular ligand-binding receptor; KEGG: gbm:Gbem_2189 extracellular ligand-binding receptor YP_002538250.1 PFAM: inner-membrane translocator; KEGG: ppd:Ppro_1672 inner-membrane translocator YP_002538251.1 PFAM: inner-membrane translocator; KEGG: ppd:Ppro_1673 inner-membrane translocator YP_002538252.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: glo:Glov_1864 ABC transporter YP_002538253.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ppd:Ppro_1675 ABC transporter YP_002538254.1 KEGG: gur:Gura_2124 phenylacetate--CoA ligase YP_002538257.1 PFAM: carbonic anhydrase; KEGG: gbm:Gbem_1148 carbonic anhydrase YP_002538258.1 PFAM: PilT protein domain protein; KEGG: gur:Gura_1751 PilT domain-containing protein YP_002538259.1 KEGG: gur:Gura_1750 hypothetical protein YP_002538261.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: ppd:Ppro_1002 HNH nuclease YP_002538262.1 KEGG: rsh:Rsph17029_3384 hypothetical protein YP_002538263.1 SMART: DEAD/DEAH box helicases; KEGG: bpu:BPUM_3674 DNA helicase YP_002538264.1 KEGG: bpu:BPUM_3675 hypothetical protein YP_002538265.1 KEGG: gur:Gura_3822 hypothetical protein YP_002538266.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: sat:SYN_02183 protein ErfK YP_002538267.1 PFAM: DNA polymerase beta domain protein region; KEGG: pph:Ppha_0157 DNA polymerase beta domain protein region YP_002538268.1 KEGG: gur:Gura_2273 hypothetical protein YP_002538269.1 PFAM: protein of unknown function DUF497; KEGG: gur:Gura_2272 hypothetical protein YP_002538270.1 PFAM: RES domain protein; KEGG: gur:Gura_0589 hypothetical protein YP_002538271.1 KEGG: cli:Clim_0107 hypothetical protein YP_002538272.1 PFAM: protein of unknown function DUF1555; KEGG: gme:Gmet_2512 hypothetical protein YP_002538273.1 KEGG: gur:Gura_2121 6-pyruvoyl tetrahydropterin synthase YP_002538274.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: dde:Dde_1151 metal dependent phosphohydrolase YP_002538275.1 PFAM: NUDIX hydrolase; KEGG: gme:Gmet_1790 NUDIX hydrolase YP_002538276.1 PFAM: Creatininase; KEGG: gur:Gura_2123 creatininase YP_002538277.1 PFAM: radical SAM protein; KEGG: gur:Gura_2122 radical SAM domain-containing protein YP_002538278.1 TIGRFAM: queuosine biosynthesis protein QueD; PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: gur:Gura_2121 6-pyruvoyl tetrahydropterin synthase YP_002538279.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: gbm:Gbem_3051 multi-sensor hybrid histidine kinase YP_002538280.1 PFAM: NMT1/THI5 like domain protein; KEGG: pol:Bpro_2402 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like YP_002538281.1 PFAM: Na+/H+ antiporter NhaA; KEGG: gme:Gmet_1089 Na+/H+ antiporter NhaA YP_002538283.1 TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: gur:Gura_2485 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_002538284.1 PFAM: Lytic transglycosylase catalytic; KEGG: gur:Gura_2486 lytic transglycosylase, catalytic YP_002538285.1 KEGG: gur:Gura_2487 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase YP_002538286.1 PFAM: Chorismate mutase; KEGG: gur:Gura_2488 chorismate mutase YP_002538287.1 KEGG: gur:Gura_2489 hypothetical protein YP_002538288.1 PFAM: AsmA family protein; KEGG: pca:Pcar_1313 hypothetical protein YP_002538289.1 PFAM: glycosyl transferase group 1; KEGG: mem:Memar_1192 glycosyl transferase, group 1 YP_002538290.1 KEGG: gur:Gura_0264 hypothetical protein YP_002538291.1 KEGG: gbm:Gbem_3370 hypothetical protein YP_002538292.1 PFAM: peptidase M48 Ste24p; KEGG: ppd:Ppro_3569 peptidase M48, Ste24p YP_002538293.1 KEGG: glo:Glov_0553 hypothetical protein YP_002538294.1 KEGG: gur:Gura_0900 hypothetical protein YP_002538295.1 PFAM: CopG family transcriptional regulator; KEGG: gur:Gura_0898 CopG/DNA-binding domain-containing protein YP_002538296.1 PFAM: import inner membrane translocase subunit Tim44; KEGG: gur:Gura_0901 import inner membrane translocase, subunit Tim44 YP_002538297.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: glo:Glov_2546 PpiC-type peptidyl-prolyl cis-trans isomerase YP_002538298.1 KEGG: gur:Gura_2847 spermidine synthase-like protein YP_002538299.1 KEGG: sfu:Sfum_2406 cell division inhibitor SulA YP_002538300.1 PFAM: aminotransferase class I and II; KEGG: gme:Gmet_2078 hypothetical protein YP_002538301.1 PFAM: major facilitator superfamily MFS_1; KEGG: gsu:GSU2490 oxalate/formate antiporter YP_002538302.1 KEGG: gbm:Gbem_1146 hypothetical protein YP_002538303.1 KEGG: gur:Gura_1479 MazF family transcriptional regulator YP_002538304.1 PFAM: SpoVT/AbrB domain protein; KEGG: gur:Gura_1478 MazE family transcriptional regulator YP_002538305.1 PFAM: helix-turn-helix domain protein; KEGG: pph:Ppha_0986 transcriptional regulator, XRE family YP_002538306.1 KEGG: glo:Glov_3517 N-6 DNA methylase YP_002538307.1 KEGG: pst:PSPTO_4754 hypothetical protein YP_002538308.1 KEGG: paa:Paes_2394 hypothetical protein YP_002538310.1 PFAM: HNH endonuclease; KEGG: pfl:PFL_2962 hypothetical protein YP_002538311.1 KEGG: pfl:PFL_2963 hypothetical protein YP_002538312.1 KEGG: eba:p2A50 type I restriction-modification system (specificity subunit) YP_002538313.1 PFAM: N-6 DNA methylase; KEGG: pfl:PFL_2965 type I restriction-modification system, M subunit YP_002538314.1 PFAM: helicase domain protein; type III restriction protein res subunit; protein of unknown function DUF450; SMART: DEAD/DEAH box helicases; KEGG: neu:NE2499 DEAD/DEAH box helicase YP_002538315.1 PFAM: DNA topoisomerase type IA zn finger domain protein; KEGG: pca:Pcar_0292 topoisomerase-associated Zn-finger domain protein YP_002538316.1 PFAM: Domain of unknown function DUF1814; KEGG: cpb:Cphamn1_0715 domain of unknown function DUF1814 YP_002538317.1 KEGG: cpb:Cphamn1_0714 hypothetical protein YP_002538318.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation YP_002538319.1 KEGG: gur:Gura_2082 DNA uptake protein and related DNA-binding protein-like protein YP_002538320.1 PFAM: amidohydrolase; KEGG: gur:Gura_2081 amidohydrolase YP_002538321.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine YP_002538322.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate YP_002538323.1 PFAM: GAF domain protein; chemotaxis sensory transducer; KEGG: gur:Gura_2077 methyl-accepting chemotaxis sensory transducer YP_002538324.1 PFAM: phosphofructokinase; KEGG: gur:Gura_2076 6-phosphofructokinase YP_002538325.1 PFAM: ROK family protein; KEGG: gur:Gura_2075 ROK family protein YP_002538326.1 PFAM: histidine triad (HIT) protein; KEGG: gur:Gura_2074 histidine triad (HIT) protein YP_002538327.1 NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate YP_002538328.1 KEGG: gur:Gura_2072 hypothetical protein YP_002538329.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: gur:Gura_2071 hypothetical protein YP_002538330.1 PFAM: transglutaminase domain protein; KEGG: gme:Gmet_1634 transglutaminase-like YP_002538331.1 PFAM: protein of unknown function DUF58; KEGG: gbm:Gbem_1320 protein of unknown function DUF58 YP_002538332.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: gme:Gmet_1632 MoxR family protein YP_002538333.1 KEGG: gur:Gura_2070 hypothetical protein YP_002538334.1 KEGG: gur:Gura_2069 orotate phosphoribosyltransferase; TIGRFAM: orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_002538335.1 TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase; KEGG: gur:Gura_2068 amidophosphoribosyltransferase YP_002538336.1 KEGG: gur:Gura_2067 phosphoribosylformylglycinamidine synthase YP_002538337.1 PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: gur:Gura_2066 phosphoribosylformylglycinamidine synthase II YP_002538338.1 PFAM: MscS Mechanosensitive ion channel; KEGG: gur:Gura_2065 MscS mechanosensitive ion channel YP_002538339.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide YP_002538340.1 PFAM: beta-lactamase domain protein; KEGG: gur:Gura_2063 beta-lactamase domain-containing protein YP_002538341.1 KEGG: gur:Gura_2061 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase YP_002538342.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway YP_002538343.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate YP_002538344.1 TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: gur:Gura_2058 preprotein translocase subunit SecG YP_002538345.1 KEGG: gur:Gura_2057 outer membrane lipoprotein Slp YP_002538346.1 PFAM: cupin; KEGG: gme:Gmet_0564 hypothetical protein YP_002538347.1 PFAM: permease; KEGG: gme:Gmet_0563 permease YP_002538348.1 PFAM: creatinase; peptidase M24; KEGG: gur:Gura_1345 peptidase M24 YP_002538349.1 PFAM: thioesterase; KEGG: gur:Gura_1343 thioesterase YP_002538350.1 KEGG: gur:Gura_2285 signal peptide peptidase SppA, 36K type; TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S14 ClpP; peptidase S49 YP_002538351.1 TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; KEGG: gur:Gura_2286 phosphodiesterase YP_002538352.1 KEGG: gur:Gura_2287 hypothetical protein YP_002538353.1 PFAM: response regulator receiver; KEGG: gur:Gura_2288 response regulator receiver protein YP_002538354.1 PFAM: protein of unknown function DUF534; KEGG: gur:Gura_2289 hypothetical protein YP_002538355.1 KEGG: gur:Gura_2290 hypothetical protein YP_002538356.1 TIGRFAM: cytochrome C family protein; PFAM: multihaem cytochrome; KEGG: gur:Gura_2291 cytochrome c family protein YP_002538357.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gur:Gura_2292 ABC transporter YP_002538358.1 KEGG: gur:Gura_2293 hypothetical protein YP_002538359.1 KEGG: glo:Glov_0514 hypothetical protein YP_002538360.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: gur:Gura_2295 hypothetical protein YP_002538361.1 KEGG: gur:Gura_2296 hypothetical protein YP_002538362.1 PFAM: histone deacetylase superfamily; KEGG: gur:Gura_2297 histone deacetylase superfamily protein YP_002538363.1 PFAM: Rh family protein/ammonium transporter; KEGG: gur:Gura_2298 Rh family protein/ammonium transporter YP_002538364.1 PFAM: response regulator receiver; General secretory system II protein E domain protein; KEGG: gur:Gura_2299 response regulator receiver protein YP_002538365.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation YP_002538366.1 PFAM: protein of unknown function DUF329; KEGG: gur:Gura_2301 hypothetical protein YP_002538367.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: gur:Gura_2302 NAD-dependent epimerase/dehydratase YP_002538368.1 PFAM: Sporulation domain protein; KEGG: gur:Gura_2303 sporulation domain-containing protein YP_002538369.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase YP_002538370.1 KEGG: gur:Gura_2305 hypothetical protein YP_002538371.1 PFAM: Septum formation initiator; KEGG: gur:Gura_2306 septum formation initiator YP_002538372.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; Male sterility domain; KEGG: gur:Gura_2307 NAD-dependent epimerase/dehydratase YP_002538373.1 KEGG: gur:Gura_2308 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_002538374.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin YP_002538375.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity YP_002538376.1 PFAM: PhoH family protein; SMART: Nucleotide binding protein PINc; KEGG: gur:Gura_2311 PhoH family protein YP_002538377.1 KEGG: gur:Gura_2312 hypothetical protein YP_002538378.1 TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase class V; KEGG: gur:Gura_2313 cysteine desulfurase family protein YP_002538379.1 PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: gur:Gura_2314 phosphoesterase domain-containing protein YP_002538380.1 KEGG: gur:Gura_2315 hypothetical protein YP_002538381.1 SMART: Helix-hairpin-helix DNA-binding class 1; KEGG: gur:Gura_2316 hypothetical protein YP_002538382.1 TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: gur:Gura_2317 alpha-isopropylmalate/homocitrate synthase family transferase YP_002538383.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation. YP_002538384.1 PFAM: protein of unknown function UPF0079; KEGG: gur:Gura_2319 hypothetical protein YP_002538385.1 PFAM: hypothetical protein; KEGG: gur:Gura_2320 CBS domain-containing protein YP_002538386.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: gur:Gura_2321 carbohydrate kinase, YjeF related protein YP_002538387.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids YP_002538388.1 KEGG: gur:Gura_2747 hypothetical protein YP_002538389.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: gur:Gura_2323 CRP/FNR family transcriptional regulator YP_002538390.1 KEGG: gur:Gura_2324 two component, sigma-54 specific, fis family transcriptional regulator; TIGRFAM: PEP-CTERM system response regulator; PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: ATPase AAA YP_002538391.1 PFAM: Fibronectin type III domain protein; KEGG: gur:Gura_2327 fibronectin, type III domain-containing protein YP_002538392.1 TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase class-II; asparagine synthase; KEGG: ppd:Ppro_2871 asparagine synthase (glutamine-hydrolyzing) YP_002538393.1 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers YP_002538394.1 KEGG: ppd:Ppro_2867 hypothetical protein YP_002538395.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rrs:RoseRS_3648 AMP-dependent synthetase and ligase YP_002538397.1 PFAM: polysaccharide deacetylase; KEGG: mpa:MAP0971 hypothetical protein YP_002538398.1 PFAM: ABC transporter; KEGG: cac:CAC2329 polysaccharide ABC transporter permease YP_002538399.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gur:Gura_2358 ABC transporter YP_002538400.1 PFAM: glycosyl transferase family 2; KEGG: ava:Ava_0849 glycosyl transferase family protein YP_002538401.1 PFAM: glycosyl transferase family 2; KEGG: aeh:Mlg_0132 glycosyl transferase family protein YP_002538402.1 PFAM: glycosyl transferase family 2; KEGG: ana:alr3071 probable glycosyl transferase YP_002538403.1 PFAM: glycosyl transferase group 1; KEGG: pab:PAB0973 LPS biosynthesis RfbU related protein YP_002538404.1 PFAM: plasmid maintenance system killer; KEGG: xfm:Xfasm12_1143 proteic killer suppression protein YP_002538405.1 TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: xfm:Xfasm12_1144 XRE family plasmid maintenance system antidote protein YP_002538406.1 KEGG: gur:Gura_2331 hypothetical protein YP_002538407.1 PFAM: Fibronectin type III domain protein; KEGG: ace:Acel_0617 glycoside hydrolase family protein YP_002538408.1 PFAM: glycosyl transferase group 1; KEGG: gur:Gura_2334 glycosyl transferase, group 1 YP_002538409.1 PFAM: glycosyl transferase group 1; KEGG: pth:PTH_2773 glycosyltransferase YP_002538410.1 PFAM: O-antigen polymerase; KEGG: dvl:Dvul_3061 O-antigen polymerase YP_002538411.1 PFAM: glycosyl transferase family 2; KEGG: gsu:GSU1977 glycosyl transferase, group 2 family protein YP_002538412.1 PFAM: glycosyl transferase group 1; KEGG: scl:sce5461 glycogen synthase YP_002538413.1 PFAM: glycosyl transferase family 2; KEGG: cac:CAC2171 glycosyltransferase YP_002538414.1 PFAM: protein of unknown function DUF201; KEGG: dvu:DVUA0059 hypothetical protein YP_002538415.1 TIGRFAM: eight transmembrane protein EpsH; PFAM: Eight transmembrane protein EpsH; KEGG: sus:Acid_0454 eight transmembrane protein EpsH YP_002538416.1 TIGRFAM: EpsI family protein; KEGG: rpe:RPE_1095 eight transmembrane protein EpsH YP_002538417.1 PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_0790 glycosyltransferase-like protein YP_002538418.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: gur:Gura_2343 DegT/DnrJ/EryC1/StrS aminotransferase YP_002538419.1 TIGRFAM: FemAB-related protein, PEP-CTERM system-associated; KEGG: gur:Gura_2344 hypothetical protein YP_002538420.1 TIGRFAM: polysaccharide deactylase family protein, PEP-CTERM locus subfamily; PFAM: polysaccharide deacetylase; KEGG: gur:Gura_2360 polysaccharide deacetylase YP_002538421.1 TIGRFAM: PEP-CTERM system associated protein; KEGG: gur:Gura_2361 hypothetical protein YP_002538422.1 TIGRFAM: secretion ATPase, PEP-CTERM locus subfamily; SMART: ATPase AAA; KEGG: gur:Gura_2362 ATPase AAA YP_002538423.1 TIGRFAM: capsular exopolysaccharide family; exopolysaccharide/PEPCTERM locus tyrosine autokinase; KEGG: gur:Gura_2363 non-specific protein-tyrosine kinase YP_002538424.1 TIGRFAM: polysaccharide chain length determinant protein, PEP-CTERM locus subfamily; PFAM: lipopolysaccharide biosynthesis protein; KEGG: gur:Gura_2364 lipopolysaccharide biosynthesis protein YP_002538425.1 TIGRFAM: polysaccharide export protein, PEP-CTERM sytem-associated; PFAM: polysaccharide export protein; KEGG: gur:Gura_2365 polysaccharide export protein YP_002538426.1 KEGG: gur:Gura_2366 sugar transferase; TIGRFAM: sugar transferase, PEP-CTERM system associated; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase YP_002538427.1 PFAM: hypothetical protein; Tetratricopeptide TPR_4; hypothetical protein; SMART: hypothetical protein; KEGG: gur:Gura_2367 hypothetical protein YP_002538428.1 KEGG: gur:Gura_0625 hypothetical protein YP_002538429.1 KEGG: ppr:PBPRB0946 hypothetical protein YP_002538430.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; YD repeat-containing protein; APHP domain protein; KEGG: afw:Anae109_3548 APHP domain-containing protein YP_002538431.1 PFAM: K potassium transporter; KEGG: gur:Gura_4312 K+ potassium transporter YP_002538432.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; UspA domain protein; KEGG: gsu:GSU2483 sensor histidine kinase KdpD YP_002538433.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: gur:Gura_1222 two component transcriptional regulator YP_002538434.1 PFAM: Oligosaccharyl transferase STT3 subunit; KEGG: mac:MA1172 oligosaccharyltransferase YP_002538435.1 PFAM: glutamyl-tRNA synthetase class Ic; KEGG: gur:Gura_2226 glutamyl-tRNA synthetase, class Ic YP_002538436.1 PFAM: protein of unknown function DUF1255; KEGG: gur:Gura_2227 hypothetical protein YP_002538437.1 TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: gur:Gura_2228 glutamine synthetase, type I YP_002538438.1 PFAM: nitrogen regulatory protein P-II; KEGG: gsu:GSU1836 nitrogen regulatory protein P-II YP_002538439.1 catalyzes the formation of 2-dehydropantoate from (R)-pantoate YP_002538440.1 PFAM: Peptidase M23; KEGG: gur:Gura_2231 peptidase M23B YP_002538441.1 KEGG: gur:Gura_2232 ATP-dependent helicase HrpB; TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase domain protein; helicase-associated domain protein; Helicase ATP-dependent domain protein; SMART: DEAD/DEAH box helicases YP_002538442.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: gur:Gura_2233 HAD family hydrolase YP_002538443.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: gur:Gura_2234 phosphoesterase, PA-phosphatase related YP_002538444.1 PFAM: VanZ family protein; KEGG: gme:Gmet_1347 phosphoesterase, PA-phosphatase related YP_002538445.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: gur:Gura_2235 lipopolysaccharide biosynthesis protein YP_002538446.1 PFAM: polysaccharide export protein; protein of unknown function DUF1017; KEGG: gur:Gura_2236 polysaccharide export protein YP_002538447.1 PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: gur:Gura_2237 pyruvate ferredoxin/flavodoxin oxidoreductase YP_002538448.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: gur:Gura_2238 thiamine pyrophosphate binding domain-containing protein YP_002538449.1 catalyzes the coenzyme A-dependent oxidation of 3-methyl-2-oxobutanoate coupled to the reduction of ferredoxin producing S-(2-methylpropanoyl)-CoA YP_002538450.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gur:Gura_2240 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002538451.1 PFAM: ROSMUCR transcriptional regulator; KEGG: gur:Gura_2241 MucR family transcriptional regulator YP_002538452.1 KEGG: gur:Gura_2242 biotin synthase; TIGRFAM: biotin synthase; PFAM: radical SAM protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB YP_002538453.1 TIGRFAM: dethiobiotin synthase; KEGG: gur:Gura_2243 dethiobiotin synthase YP_002538454.1 TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; KEGG: gur:Gura_2244 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_002538455.1 KEGG: gur:Gura_2245 hypothetical protein YP_002538456.1 PFAM: hypothetical protein; phosphoesterase RecJ domain protein; Polynucleotide adenylyltransferase region; phosphoesterase DHHA1; KEGG: gur:Gura_2246 CBS domain-containing protein YP_002538457.1 PFAM: protein of unknown function DUF52; KEGG: gur:Gura_2247 hypothetical protein YP_002538458.1 TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: gur:Gura_2248 transcriptional regulator YP_002538459.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: gur:Gura_2249 chromosome segregation and condensation protein ScpA YP_002538460.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_002538461.1 PFAM: peptidase M50; KEGG: gur:Gura_2251 peptidase M50 YP_002538462.1 PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: gur:Gura_2252 RNA-binding S1 domain-containing protein YP_002538463.1 KEGG: gur:Gura_2253 hypothetical protein YP_002538464.1 hydrolyzes non-standard nucleotides such as xanthine and inosine YP_002538465.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs YP_002538466.1 KEGG: gur:Gura_2257 hypothetical protein YP_002538467.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: gur:Gura_2258 diguanylate cyclase YP_002538468.1 Catalyzes the rate-limiting step in dNTP synthesis YP_002538469.1 PFAM: SCP-like extracellular; KEGG: gur:Gura_2270 allergen V5/TPX-1 family protein YP_002538470.1 KEGG: gbm:Gbem_0797 hypothetical protein YP_002538471.1 PFAM: Rubrerythrin; KEGG: gur:Gura_2277 rubrerythrin YP_002538472.1 PFAM: excinuclease ABC subunit C; KEGG: gur:Gura_2278 excinuclease ABC subunit C YP_002538473.1 PFAM: General secretory system II protein E domain protein; KEGG: gur:Gura_2279 general secretion pathway protein E YP_002538474.1 TIGRFAM: oligoendopeptidase, pepF/M3 family; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F; KEGG: gur:Gura_2055 PepF/M3 family oligoendopeptidase YP_002538475.1 PFAM: peptidase M48 Ste24p; KEGG: gbm:Gbem_3390 peptidase M48 Ste24p YP_002538476.1 KEGG: gur:Gura_2053 hypothetical protein YP_002538477.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gur:Gura_2052 binding-protein-dependent transport systems inner membrane component YP_002538478.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ppd:Ppro_2014 binding-protein-dependent transport systems inner membrane component YP_002538479.1 PFAM: extracellular solute-binding protein family 5; KEGG: gur:Gura_2049 extracellular solute-binding protein YP_002538480.1 PFAM: hypothetical protein; Sel1 domain protein repeat-containing protein; hypothetical protein; SMART: hypothetical protein; KEGG: gur:Gura_2048 hypothetical protein YP_002538481.1 KEGG: gur:Gura_2047 hypothetical protein YP_002538482.1 KEGG: gur:Gura_2046 hypothetical protein YP_002538483.1 PFAM: Na+/solute symporter; GAF domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: gur:Gura_2045 GAF sensor protein YP_002538484.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: gur:Gura_2044 anti-sigma-factor antagonist YP_002538485.1 KEGG: gur:Gura_2043 anti-sigma regulatory factor, serine/threonine protein kinase YP_002538486.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein YP_002538487.1 PFAM: hypothetical protein; MgtE intracellular region; KEGG: gur:Gura_2041 MgtE intracellular region YP_002538488.1 PFAM: natural resistance-associated macrophage protein; KEGG: gur:Gura_2040 natural resistance-associated macrophage protein YP_002538489.1 KEGG: gur:Gura_2039 hypothetical protein YP_002538490.1 PFAM: histidine triad (HIT) protein; KEGG: gur:Gura_2038 histidine triad (HIT) protein YP_002538491.1 TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; KEGG: gur:Gura_2037 hemolysin A YP_002538492.1 TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; KEGG: gur:Gura_1842 UbiD family decarboxylase YP_002538493.1 TIGRFAM: cysteine desulfurase NifS; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: gur:Gura_1833 aminotransferase, class V YP_002538494.1 TIGRFAM: Fe-S cluster assembly protein NifU; PFAM: nitrogen-fixing NifU domain protein; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: gur:Gura_1832 Fe-S cluster assembly protein NifU YP_002538495.1 PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: gur:Gura_1831 phosphoglucomutase/phosphomannomutase alpha/beta/subunit YP_002538496.1 KEGG: gur:Gura_1830 hypothetical protein YP_002538497.1 PFAM: NUDIX hydrolase; KEGG: gur:Gura_1829 NUDIX hydrolase YP_002538498.1 PFAM: protein of unknown function DUF178; KEGG: gur:Gura_1828 hypothetical protein YP_002538499.1 TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; KEGG: gur:Gura_1827 glycine cleavage system H protein YP_002538500.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: gur:Gura_1826 acetyl-CoA carboxylase, biotin carboxylase YP_002538501.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: gur:Gura_1825 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_002538502.1 PFAM: creatinase; peptidase M24; KEGG: gur:Gura_1824 peptidase M24 YP_002538503.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis YP_002538504.1 KEGG: gur:Gura_1822 hypothetical protein YP_002538505.1 SMART: hypothetical protein; KEGG: gur:Gura_1821 hypothetical protein YP_002538506.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis YP_002538507.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis YP_002538508.1 KEGG: gur:Gura_1816 Ig family protein YP_002538509.1 KEGG: gbm:Gbem_1551 hypothetical protein YP_002538510.1 TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB short domain; KEGG: gur:Gura_1814 type IV pilus secretin PilQ YP_002538511.1 KEGG: gur:Gura_1813 hypothetical protein YP_002538512.1 PFAM: Pilus assembly protein PilO; KEGG: gur:Gura_1812 pilus assembly protein, PilO YP_002538513.1 PFAM: Fimbrial assembly family protein; KEGG: gur:Gura_1811 fimbrial assembly family protein YP_002538514.1 TIGRFAM: type IV pilus assembly protein PilM; KEGG: gur:Gura_1810 type IV pilus assembly protein PilM YP_002538515.1 PFAM: helix-turn-helix domain protein; KEGG: gur:Gura_1809 XRE family transcriptional regulator YP_002538517.1 KEGG: gbm:Gbem_1544 hypothetical protein YP_002538518.1 KEGG: gbm:Gbem_2342 hypothetical protein YP_002538519.1 KEGG: gsu:GSU2036 hypothetical protein YP_002538520.1 KEGG: gbm:Gbem_2344 hypothetical protein YP_002538521.1 KEGG: gsu:GSU2038 hypothetical protein YP_002538522.1 KEGG: gsu:GSU2039 hypothetical protein YP_002538523.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: gur:Gura_1802 two component, sigma-54 specific, fis family transcriptional regulator YP_002538524.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: gur:Gura_1801 integral membrane sensor signal transduction histidine kinase YP_002538525.1 PFAM: peptidase A24A prepilin type IV; peptidase A24A domain protein; KEGG: gur:Gura_1800 peptidase A24A domain-containing protein YP_002538526.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain YP_002538527.1 PFAM: response regulator receiver; KEGG: gur:Gura_1798 response regulator receiver protein YP_002538528.1 PFAM: beta-lactamase; KEGG: gur:Gura_1797 beta-lactamase YP_002538529.1 KEGG: gur:Gura_1796 hypothetical protein YP_002538530.1 bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate YP_002538531.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins YP_002538532.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: gur:Gura_1793 metal dependent phosphohydrolase YP_002538533.1 KEGG: gur:Gura_1791 hypothetical protein YP_002538534.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: gur:Gura_1790 peptidylprolyl isomerase, FKBP-type YP_002538535.1 PFAM: conserved hypothetical protein; KEGG: gur:Gura_1789 hypothetical protein YP_002538536.1 PFAM: NLP/P60 protein; Sporulation domain protein; KEGG: gur:Gura_1787 NLP/P60 protein YP_002538538.1 Transfers the fatty acyl group on membrane lipoproteins YP_002538539.1 PFAM: hypothetical protein; transporter-associated region; KEGG: gur:Gura_1784 CBS domain-containing protein YP_002538540.1 PFAM: phosphoesterase PA-phosphatase related; diacylglycerol kinase; KEGG: gur:Gura_1783 diacylglycerol kinase YP_002538541.1 PFAM: protein of unknown function UPF0054; KEGG: gur:Gura_1782 hypothetical protein YP_002538542.1 KEGG: gur:Gura_1781 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; metal-dependent phosphohydrolase 7TM intracellular region; SMART: metal-dependent phosphohydrolase HD region YP_002538543.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis YP_002538544.1 KEGG: gur:Gura_1779 hypothetical protein YP_002538545.1 TIGRFAM: transcription elongation factor GreB; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: gur:Gura_1778 transcription elongation factor GreB YP_002538546.1 KEGG: gur:Gura_1776 hypothetical protein YP_002538547.1 PFAM: protein of unknown function DUF399; KEGG: gur:Gura_1775 hypothetical protein YP_002538548.1 PFAM: protein of unknown function DUF512; KEGG: gur:Gura_1774 hypothetical protein YP_002538549.1 PFAM: protein of unknown function UPF0118; KEGG: gur:Gura_1773 hypothetical protein YP_002538550.1 TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; KEGG: gur:Gura_1772 RNA chaperone Hfq YP_002538551.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity YP_002538552.1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex YP_002538553.1 TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: gbm:Gbem_0268 aminopeptidase N YP_002538554.1 PFAM: protein of unknown function DUF55; KEGG: gbm:Gbem_0266 protein of unknown function DUF55 YP_002538555.1 KEGG: gur:Gura_4004 formate-dependent nitrite reductase periplasmic cytochrome c552 subunit-like protein YP_002538556.1 KEGG: gbm:Gbem_2729 hypothetical protein YP_002538557.1 KEGG: sus:Acid_1267 PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002538558.1 PFAM: amidohydrolase; KEGG: pla:Plav_1136 amidohydrolase YP_002538559.1 PFAM: multiple antibiotic resistance (MarC)-related protein; Integral membrane protein TerC; KEGG: sru:SRU_2562 hypothetical protein YP_002538560.1 PFAM: OmpA/MotB domain protein; KEGG: gme:Gmet_2553 OmpA/MotB YP_002538561.1 KEGG: gur:Gura_0423 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002538562.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: glo:Glov_0541 protein of unknown function DUF6 transmembrane YP_002538563.1 KEGG: ade:Adeh_1787 hypothetical protein YP_002538568.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: mmi:MMAR_3782 transposase YP_002538570.1 KEGG: ppu:PP_3707 hypothetical protein YP_002538571.1 KEGG: pph:Ppha_1420 hypothetical protein YP_002538572.1 KEGG: fjo:Fjoh_3630 kap P-loop domain-containing protein YP_002538573.1 KEGG: sbl:Sbal_3871 hypothetical protein YP_002538575.1 PFAM: Fibronectin type III domain protein; KEGG: gur:Gura_2036 fibronectin, type III domain-containing protein YP_002538576.1 TIGRFAM: cytochrome C family protein; PFAM: multihaem cytochrome; KEGG: gur:Gura_2035 cytochrome c family protein YP_002538577.1 PFAM: protein of unknown function DUF477; KEGG: gur:Gura_2034 hypothetical protein YP_002538578.1 PFAM: protein of unknown function DUF477; KEGG: gur:Gura_2033 hypothetical protein YP_002538579.1 PFAM: LemA family protein; KEGG: gur:Gura_2032 LemA family protein YP_002538580.1 KEGG: gur:Gura_2031 hypothetical protein YP_002538581.1 TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: gur:Gura_2030 RNA methyltransferase YP_002538582.1 KEGG: gur:Gura_2029 hypothetical protein YP_002538583.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: gur:Gura_2028 ErfK/YbiS/YcfS/YnhG family protein YP_002538584.1 KEGG: gur:Gura_2027 LAO/AO transport system ATPase; TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; SMART: ATPase AAA YP_002538585.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: gme:Gmet_1575 enoyl-CoA hydratase/isomerase YP_002538586.1 PFAM: cobalamin B12-binding domain protein; KEGG: gur:Gura_2026 cobalamin B12-binding domain-containing protein YP_002538587.1 TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; KEGG: gur:Gura_2025 cob(I)alamin adenosyltransferase YP_002538588.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: gme:Gmet_1572 short chain enoyl-CoA hydratase YP_002538589.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: gsu:GSU1030 methyl-accepting chemotaxis protein YP_002538590.1 TIGRFAM: PfaD family protein; KEGG: gur:Gura_2013 2-nitropropane dioxygenase, NPD YP_002538591.1 KEGG: gur:Gura_2012 erythronolide synthase; TIGRFAM: polyketide-type polyunsaturated fatty acid synthase PfaA; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; Beta-ketoacyl synthase ; Acyl transferase YP_002538592.1 PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; Beta-ketoacyl synthase; KEGG: gur:Gura_2011 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ YP_002538593.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs YP_002538594.1 PFAM: alpha/beta hydrolase fold; KEGG: gur:Gura_2009 alpha/beta hydrolase fold YP_002538595.1 Catalyzes the specific recognition and activation of amino acids during peptide synthesis YP_002538596.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: gur:Gura_2007 3-beta hydroxysteroid dehydrogenase/isomerase YP_002538597.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: gur:Gura_2006 4'-phosphopantetheinyl transferase YP_002538598.1 PFAM: NERD domain protein; KEGG: gur:Gura_2005 hypothetical protein YP_002538599.1 KEGG: gur:Gura_2004 hypothetical protein YP_002538600.1 KEGG: gur:Gura_1999 hypothetical protein YP_002538601.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: gur:Gura_1998 Sel1 domain-containing protein YP_002538602.1 PFAM: NHL repeat containing protein; KEGG: gur:Gura_1997 NHL repeat-containing protein YP_002538603.1 TIGRFAM: cytochrome C family protein; PFAM: multihaem cytochrome; KEGG: gur:Gura_1996 cytochrome c family protein YP_002538604.1 TIGRFAM: cytochrome C family protein; PFAM: multihaem cytochrome; KEGG: gur:Gura_1995 cytochrome c family protein YP_002538605.1 KEGG: gur:Gura_1994 hypothetical protein YP_002538606.1 KEGG: gur:Gura_1993 hypothetical protein YP_002538607.1 KEGG: gur:Gura_1992 hypothetical protein YP_002538608.1 KEGG: gur:Gura_1991 hypothetical protein YP_002538609.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: gur:Gura_1990 YVTN beta-propeller repeat-containing protein YP_002538610.1 KEGG: gur:Gura_1989 hypothetical protein YP_002538611.1 PFAM: NHL repeat containing protein; KEGG: gur:Gura_1988 hypothetical protein YP_002538612.1 KEGG: gur:Gura_1987 heavy metal sensor signal transduction histidine kinase; TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein YP_002538613.1 TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: gur:Gura_1986 two component heavy metal response transcriptional regulator YP_002538614.1 PFAM: CheW domain protein; KEGG: gur:Gura_0957 chemotaxis protein CheW YP_002538615.1 PFAM: UMUC domain protein DNA-repair protein; KEGG: gme:Gmet_1441 UMUC-like DNA-repair protein YP_002538616.1 PFAM: Peptidase M23; KEGG: tye:THEYE_A0052 membrane protein YP_002538617.1 PFAM: protein of unknown function DUF583; KEGG: tye:THEYE_A0051 hypothetical protein YP_002538618.1 KEGG: mxa:MXAN_3348 CobQ/CobB/MinD/ParA nucleotide binding domain protein YP_002538619.1 KEGG: scl:sce0424 hypothetical protein YP_002538620.1 KEGG: gsu:GSU1761 cytochrome c family protein YP_002538621.1 KEGG: gur:Gura_2016 hypothetical protein YP_002538622.1 KEGG: pnu:Pnuc_1619 hypothetical protein YP_002538623.1 KEGG: glo:Glov_1219 hypothetical protein YP_002538624.1 PFAM: glutaredoxin; KEGG: gme:Gmet_2959 glutaredoxin-like protein, YruB YP_002538625.1 PFAM: SMC domain protein; KEGG: gbm:Gbem_2301 SMC domain protein YP_002538626.1 KEGG: rca:Rcas_4353 hypothetical protein YP_002538627.1 PFAM: metallophosphoesterase; KEGG: gsu:GSU1724 nuclease SbcCD, D subunit YP_002538628.1 KEGG: paa:Paes_2109 protein of unknown function DUF87 YP_002538629.1 KEGG: gbm:Gbem_2975 hypothetical protein YP_002538630.1 PFAM: protein of unknown function DUF450; KEGG: ppd:Ppro_0309 hypothetical protein YP_002538632.1 KEGG: syd:Syncc9605_1837 hypothetical protein YP_002538633.1 KEGG: rpe:RPE_2498 hypothetical protein YP_002538635.1 KEGG: pph:Ppha_0773 hypothetical protein YP_002538637.1 KEGG: bps:BPSL0586 hypothetical protein YP_002538638.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: sus:Acid_5388 peptidoglycan binding domain-containing protein YP_002538640.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: gme:Gmet_1188 peptidoglycan binding domain-containing protein YP_002538641.1 KEGG: xac:XAC1606 hypothetical protein YP_002538644.1 KEGG: xac:XAC1608 hypothetical protein YP_002538645.1 KEGG: xac:XAC1607 hypothetical protein YP_002538647.1 PFAM: helix-turn-helix domain protein; KEGG: bra:BRADO2463 transcriptional regulatory protein YP_002538648.1 PFAM: Patatin; KEGG: gur:Gura_1912 patatin YP_002538650.1 KEGG: gur:Gura_1965 ABC-type uncharacterized transport system periplasmic component-like protein YP_002538651.1 PFAM: TonB-dependent receptor plug; KEGG: gur:Gura_1964 TonB-dependent receptor, plug YP_002538653.1 PFAM: radical SAM protein; KEGG: gur:Gura_1961 radical SAM domain-containing protein YP_002538654.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: gur:Gura_1960 integral membrane sensor signal transduction histidine kinase YP_002538655.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: gur:Gura_1959 two component, sigma-54 specific, fis family transcriptional regulator YP_002538656.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: gur:Gura_1955 pyridoxamine 5'-phosphate oxidase-related, FMN-binding YP_002538657.1 PFAM: type IV pilus assembly PilZ; KEGG: gur:Gura_1954 type IV pilus assembly PilZ YP_002538658.1 TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: gur:Gura_1953 hydrogenase expression/formation protein HypE YP_002538659.1 TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; KEGG: gur:Gura_1952 hydrogenase expression/formation protein HypD YP_002538660.1 TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: gur:Gura_1951 hydrogenase assembly chaperone HypC/HupF YP_002538661.1 TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC domain; zinc finger HypF domain protein; KEGG: gur:Gura_1950 (NiFe) hydrogenase maturation protein HypF YP_002538662.1 TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; KEGG: gur:Gura_1949 hydrogenase accessory protein HypB YP_002538663.1 PFAM: SCP-like extracellular; KEGG: dra:DR_1009 hypothetical protein YP_002538664.1 PFAM: hydrogenase expression/synthesis HypA; KEGG: gur:Gura_1942 hydrogenase nickel insertion protein HypA YP_002538665.1 PFAM: protein of unknown function DUF400; KEGG: tye:THEYE_A1915 hypothetical protein YP_002538666.1 KEGG: glo:Glov_1264 S-layer domain protein YP_002538667.1 TIGRFAM: membrane lipoprotein lipid attachment site; KEGG: gur:Gura_3947 membrane lipoprotein lipid attachment site YP_002538668.1 PFAM: hypothetical protein; hypothetical protein; SMART: hypothetical protein; KEGG: gur:Gura_3949 hypothetical protein YP_002538669.1 KEGG: dol:Dole_1197 hypothetical protein YP_002538670.1 TIGRFAM: PAS sensor protein; PFAM: extracellular solute-binding protein family 3; response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ppd:Ppro_0066 multi-sensor hybrid histidine kinase YP_002538671.1 TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: gsu:GSU1854 UDP-N-acetyl-D-mannosamine dehydrogenase YP_002538672.1 KEGG: noc:Noc_2737 hypothetical protein YP_002538674.1 KEGG: bvi:Bcep1808_1991 hypothetical protein YP_002538678.1 TIGRFAM: squalene/oxidosqualene cyclase; squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase; KEGG: ppd:Ppro_0765 squalene-hopene cyclase YP_002538679.1 PFAM: regulatory protein TetR; KEGG: ppd:Ppro_0764 TetR family transcriptional regulator YP_002538680.1 PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; KEGG: gme:Gmet_1613 AMP-dependent synthetase and ligase:phospholipid/glycerol acyltransferase YP_002538681.1 KEGG: aav:Aave_2393 hypothetical protein YP_002538682.1 TIGRFAM: glycogen debranching enzyme; PFAM: Amylo-alpha-16-glucosidase; KEGG: gbm:Gbem_1681 glycogen debranching enzyme YP_002538683.1 KEGG: gbm:Gbem_1682 malto-oligosyltrehalose trehalohydrolase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_002538684.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; Male sterility domain; KR domain protein; KEGG: gbm:Gbem_1683 NAD-dependent epimerase/dehydratase YP_002538685.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: gbm:Gbem_1684 NAD-dependent epimerase/dehydratase YP_002538686.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: pzu:PHZ_c2665 threonine dehydrogenase YP_002538687.1 PFAM: Semialdehyde dehydrogenase NAD - binding; oxidoreductase domain protein; Oxidoreductase domain; homoserine dehydrogenase NAD-binding; KEGG: gbm:Gbem_1686 oxidoreductase domain protein YP_002538688.1 PFAM: glycosyl transferase group 1; KEGG: gbm:Gbem_1687 glycosyl transferase group 1 YP_002538689.1 KEGG: gbm:Gbem_1688 hypothetical protein YP_002538690.1 KEGG: gbm:Gbem_1689 hypothetical protein YP_002538691.1 KEGG: gbm:Gbem_1690 hypothetical protein YP_002538692.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: gbm:Gbem_1691 methyltransferase type 11 YP_002538693.1 KEGG: swd:Swoo_1087 hypothetical protein YP_002538696.1 PFAM: protein of unknown function DUF1568; KEGG: gsu:GSU2396 hypothetical protein YP_002538697.1 PFAM: NHL repeat containing protein; KEGG: gbm:Gbem_2063 NHL repeat containing protein YP_002538698.1 KEGG: chu:CHU_0652 hypothetical protein YP_002538699.1 PFAM: methyltransferase type 11; KEGG: gme:Gmet_2793 hypothetical protein YP_002538700.1 KEGG: gsu:GSU2768 hypothetical protein YP_002538701.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; radical SAM protein; KEGG: dvl:Dvul_0980 glycyl-radical activating family protein YP_002538702.1 PFAM: pyruvate formate-lyase PFL; KEGG: cno:NT01CX_0385 pyruvate formate-lyase YP_002538703.1 PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: pas:Pars_1164 aldehyde ferredoxin oxidoreductase YP_002538704.1 KEGG: gbm:Gbem_3594 hypothetical protein YP_002538705.1 KEGG: ecf:ECH74115_3766 hypothetical protein YP_002538707.1 regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity YP_002538708.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis YP_002538709.1 KEGG: gur:Gura_1857 dihydroorotase, multifunctional complex type; TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; amidohydrolase YP_002538710.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers YP_002538711.1 PFAM: radical SAM protein; KEGG: gur:Gura_1859 radical SAM domain-containing protein YP_002538712.1 PFAM: protein of unknown function DUF486; KEGG: glo:Glov_2080 protein of unknown function DUF486 YP_002538713.1 KEGG: gur:Gura_3864 hypothetical protein YP_002538714.1 PFAM: PilT protein domain protein; KEGG: gur:Gura_3863 PilT domain-containing protein YP_002538715.1 TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; RimK domain protein ATP-grasp; KEGG: gur:Gura_1864 carbamoyl-phosphate synthase, large subunit YP_002538716.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus YP_002538717.1 PFAM: Domain of unknown function DUF1858; KEGG: gur:Gura_1866 hypothetical protein YP_002538718.1 PFAM: beta-lactamase domain protein; KEGG: tye:THEYE_A0282 metal dependent hydrolase YP_002538719.1 PFAM: glutamate synthase alpha subunit domain protein; KEGG: gur:Gura_2490 glutamate synthase alpha subunit YP_002538720.1 PFAM: glutamine amidotransferase class-II; KEGG: gur:Gura_2491 glutamine amidotransferase, class-II YP_002538721.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gur:Gura_2492 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_002538722.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gur:Gura_2493 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002538723.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; ferredoxin-dependent glutamate synthase; KEGG: gur:Gura_2494 glutamate synthase (NADPH) YP_002538724.1 PFAM: protein of unknown function UPF0044; KEGG: gur:Gura_2495 hypothetical protein YP_002538725.1 KEGG: gur:Gura_2496 hypothetical protein YP_002538726.1 dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate YP_002538727.1 TIGRFAM: methyltransferase; PFAM: Protein of unknown function methylase KEGG: gur:Gura_2499 methyltransferase YP_002538728.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA YP_002538729.1 PFAM: Domain of unknown function DUF1858; KEGG: gur:Gura_2502 hypothetical protein YP_002538730.1 binds to the ribosome on the universally-conserved alpha-sarcin loop YP_002538731.1 KEGG: gur:Gura_2504 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein YP_002538732.1 KEGG: mca:MCA0704 hypothetical protein YP_002538733.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: gur:Gura_2505 pseudouridine synthase YP_002538734.1 PFAM: DNA polymerase beta domain protein region; KEGG: gur:Gura_1133 DNA polymerase beta subunit YP_002538735.1 TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family; PFAM: Nucleotidyltransferase substrate binding protein HI0074; KEGG: maq:Maqu_2654 HI0074 family nucleotidyltransferase substrate binding protein YP_002538736.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein YP_002538737.1 KEGG: gur:Gura_2507 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein YP_002538738.1 stationary phase protein that binds TrpR repressor YP_002538739.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; radical SAM protein; KEGG: gur:Gura_2510 TatD family hydrolase YP_002538740.1 TIGRFAM: desulfoferrodoxin; PFAM: Desulfoferrodoxin ferrous iron-binding region; Desulfoferrodoxin Dfx domain protein; KEGG: gur:Gura_2513 desulfoferrodoxin YP_002538741.1 PFAM: major facilitator superfamily MFS_1; KEGG: gur:Gura_2536 major facilitator transporter YP_002538742.1 PFAM: transglutaminase domain protein; KEGG: gur:Gura_2537 transglutaminase domain-containing protein YP_002538743.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gur:Gura_2539 LysR family transcriptional regulator YP_002538744.1 PFAM: protein of unknown function UPF0005; KEGG: ppd:Ppro_2141 hypothetical protein YP_002538745.1 PFAM: YaeQ family protein; KEGG: gsu:GSU2092 hypothetical protein YP_002538746.1 PFAM: DTW domain containing protein; KEGG: ppd:Ppro_1565 DTW domain-containing protein YP_002538747.1 PFAM: helicase domain protein; DEAD/DEAH box helicase; SMART: DEAD/DEAH box helicases; KEGG: gur:Gura_1632 DEAD/DEAH box helicase domain-containing protein YP_002538748.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: glo:Glov_3009 cold-shock DNA-binding domain protein YP_002538749.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: gme:Gmet_1662 antibiotic biosynthesis monooxygenase YP_002538750.1 PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; KEGG: glo:Glov_2360 polynucleotide adenylyltransferase/metal dependent phosphohydrolase YP_002538751.1 PFAM: polysaccharide deacetylase; KEGG: cbe:Cbei_3474 polysaccharide deacetylase YP_002538752.1 KEGG: mxa:MXAN_1696 bacterial Ig-like domain protein YP_002538753.1 PFAM: Cna B domain protein; KEGG: dac:Daci_4515 APHP domain-containing protein YP_002538757.1 PFAM: transglutaminase domain protein; KEGG: gur:Gura_0056 hypothetical protein YP_002538758.1 PFAM: protein of unknown function DUF1540; KEGG: gbm:Gbem_1185 hypothetical protein YP_002538759.1 PFAM: nitroreductase; KEGG: gme:Gmet_1074 nitroreductase YP_002538760.1 PFAM: Class I peptide chain release factor; KEGG: gur:Gura_2540 class I peptide chain release factor YP_002538761.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: gur:Gura_2541 metal dependent phophohydrolase YP_002538762.1 KEGG: gur:Gura_2543 phosphotransacetylase domain-containing protein YP_002538763.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: gur:Gura_2544 ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_002538764.1 KEGG: gur:Gura_2545 hypothetical protein YP_002538765.1 KEGG: gur:Gura_2546 protein-disulfide isomerase-like protein YP_002538766.1 PFAM: ABC transporter transmembrane region; ABC transporter; SMART: ATPase AAA; KEGG: gur:Gura_2547 ABC transporter YP_002538770.1 KEGG: gur:Gura_2550 outer membrane adhesin like protein; TIGRFAM: outer membrane adhesin like proteiin; PFAM: Hemolysin-type calcium-binding region; Ig family protein; Haemolysin-type calcium binding domain protein; SMART: Dystroglycan-type cadherin domain protein YP_002538771.1 PFAM: radical SAM protein; KEGG: nth:Nther_0825 radical SAM domain protein YP_002538772.1 KEGG: gur:Gura_2551 glycosyl transferase related to UDP-glucuronosyltransferase-like protein YP_002538773.1 TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: gur:Gura_2552 HlyD family type I secretion membrane fusion protein YP_002538774.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: dar:Daro_4064 hypothetical protein YP_002538775.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: lch:Lcho_3675 TRAP dicarboxylate transporter-DctP subunit YP_002538776.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis YP_002538777.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: gur:Gura_2617 RpoD family RNA polymerase sigma factor YP_002538778.1 KEGG: gur:Gura_2618 protein-L-isoaspartate O-methyltransferase; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_002538779.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate YP_002538780.1 KEGG: gur:Gura_0576 hypothetical protein YP_002538781.1 KEGG: gur:Gura_2760 cobalt ABC transporter, ATPase subunit; TIGRFAM: cobalt ABC transporter, ATPase subunit; PFAM: ABC transporter; SMART: ATPase AAA YP_002538782.1 TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: gur:Gura_2761 cobalt ABC transporter, inner membrane subunit CbiQ YP_002538783.1 PFAM: cobalamin B12-binding domain protein; radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: gur:Gura_0516 radical SAM domain-containing protein YP_002538784.1 KEGG: gsu:GSU2889 hypothetical protein YP_002538785.1 KEGG: gbm:Gbem_1164 hypothetical protein YP_002538786.1 PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: gur:Gura_0513 radical SAM domain-containing protein YP_002538787.1 KEGG: gbm:Gbem_1162 hypothetical protein YP_002538788.1 PFAM: cytochrome c assembly protein; KEGG: gur:Gura_0511 cytochrome c assembly protein YP_002538789.1 KEGG: gur:Gura_0510 hypothetical protein YP_002538790.1 KEGG: gbm:Gbem_1158 hypothetical protein YP_002538791.1 TIGRFAM: cytochrome C family protein; KEGG: gur:Gura_0500 cytochrome c family protein YP_002538792.1 KEGG: gur:Gura_2763 ABC-type phosphate/phosphonate transport system periplasmic component-like protein YP_002538793.1 KEGG: gur:Gura_2764 hypothetical protein YP_002538794.1 KEGG: gur:Gura_2765 hypothetical protein YP_002538795.1 KEGG: gur:Gura_1768 Fe-S oxidoreductase-like protein YP_002538796.1 PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: gur:Gura_1767 radical SAM domain-containing protein YP_002538797.1 KEGG: gur:Gura_1766 hypothetical protein YP_002538798.1 KEGG: gur:Gura_2770 hypothetical protein YP_002538799.1 KEGG: gur:Gura_1765 hypothetical protein YP_002538800.1 KEGG: gur:Gura_2771 hypothetical protein YP_002538801.1 SMART: Parallel beta-helix repeat; KEGG: gur:Gura_2772 parallel beta-helix repeat-containing protein YP_002538802.1 KEGG: gur:Gura_2621 MerR family transcriptional regulator YP_002538803.1 PFAM: histone family protein DNA-binding protein; KEGG: gur:Gura_2622 histone family protein DNA-binding protein YP_002538804.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily YP_002538805.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily YP_002538806.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit YP_002538807.1 PFAM: ribosomal protein L35; KEGG: gur:Gura_2626 50S ribosomal protein L35 YP_002538808.1 TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; KEGG: gur:Gura_2627 translation initiation factor IF-3 YP_002538809.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr) YP_002538810.1 KEGG: gur:Gura_2673 hypothetical protein YP_002538811.1 KEGG: pca:Pcar_2141 ABC-type transport system, ATPase subunit YP_002538812.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gbm:Gbem_2586 ABC transporter protein YP_002538813.1 KEGG: gur:Gura_2677 hypothetical protein YP_002538814.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: gur:Gura_2678 two component, sigma-54 specific, fis family transcriptional regulator YP_002538815.1 KEGG: gur:Gura_2679 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002538816.1 PFAM: type II secretion system protein; KEGG: gur:Gura_2680 type II secretion system protein YP_002538817.1 TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: gur:Gura_2681 twitching motility protein YP_002538818.1 TIGRFAM: type IV-A pilus assembly ATPase PilB; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: gur:Gura_2682 type IV-A pilus assembly ATPase PilB YP_002538819.1 TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; KEGG: gur:Gura_2683 shikimate 5-dehydrogenase YP_002538820.1 KEGG: gur:Gura_2684 hypothetical protein YP_002538821.1 PFAM: conserved hypothetical protein; KEGG: gur:Gura_2685 hypothetical protein YP_002538822.1 TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase; KEGG: gur:Gura_2686 riboflavin biosynthesis protein RibF YP_002538823.1 TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: gur:Gura_2687 sec-independent protein translocase, TatC subunit YP_002538824.1 PFAM: chemotaxis protein CheB; response regulator receiver; KEGG: gur:Gura_2688 response regulator receiver modulated chemotaxis protein CheB YP_002538825.1 PFAM: MCP methyltransferase CheR-type; KEGG: gur:Gura_2689 protein-glutamate O-methyltransferase YP_002538826.1 PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; SMART: Armadillo domain protein; KEGG: gur:Gura_2690 heat repeat-containing PBS lyase YP_002538827.1 PFAM: MCP methyltransferase CheR-type; KEGG: gur:Gura_2691 protein-glutamate O-methyltransferase YP_002538828.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: gur:Gura_2692 methyl-accepting chemotaxis sensory transducer YP_002538829.1 PFAM: CheW domain protein; KEGG: gur:Gura_2693 chemotaxis protein CheW YP_002538830.1 PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: gur:Gura_2694 chemotaxis protein CheA YP_002538831.1 PFAM: response regulator receiver; KEGG: gur:Gura_2695 response regulator receiver protein YP_002538832.1 PFAM: response regulator receiver; KEGG: gur:Gura_2696 response regulator receiver protein YP_002538833.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: gur:Gura_2697 two component, sigma-54 specific, fis family transcriptional regulator YP_002538834.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gur:Gura_2698 multi-sensor signal transduction histidine kinase YP_002538835.1 KEGG: gur:Gura_2699 ribonuclease R; TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; Ribonuclease B OB region domain; SMART: Cold shock protein YP_002538836.1 PFAM: hypothetical protein; Lytic transglycosylase catalytic; SMART: hypothetical protein; KEGG: gur:Gura_2700 lytic transglycosylase, catalytic YP_002538837.1 PFAM: DNA alkylation repair enzyme; KEGG: cph:Cpha266_1009 hypothetical protein YP_002538838.1 PFAM: regulatory protein MarR; KEGG: gur:Gura_2703 MarR family transcriptional regulator YP_002538839.1 PFAM: outer membrane efflux protein; KEGG: gur:Gura_2704 outer membrane efflux protein YP_002538840.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: gur:Gura_2707 multi-sensor hybrid histidine kinase YP_002538841.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: gur:Gura_2708 two component, sigma-54 specific, fis family transcriptional regulator YP_002538843.1 KEGG: gur:Gura_2709 hypothetical protein YP_002538844.1 PFAM: response regulator receiver; KEGG: gur:Gura_2710 response regulator receiver protein YP_002538845.1 KEGG: gur:Gura_2711 hypothetical protein YP_002538847.1 PFAM: multihaem cytochrome; KEGG: gur:Gura_2712 hypothetical protein YP_002538848.1 PFAM: cytochrome B561; KEGG: gur:Gura_2713 cytochrome b561 YP_002538849.1 KEGG: gur:Gura_2714 hypothetical protein YP_002538851.1 PFAM: CopG family transcriptional regulator; KEGG: gur:Gura_0833 CopG/DNA-binding domain-containing protein YP_002538852.1 PFAM: PemK family protein; KEGG: gur:Gura_0832 MazF family transcriptional regulator YP_002538853.1 TIGRFAM: CRISPR-associated protein Cas2; PFAM: protein of unknown function DUF196; KEGG: gme:Gmet_1073 hypothetical protein YP_002538854.1 TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; KEGG: gme:Gmet_1072 hypothetical protein YP_002538855.1 TIGRFAM: CRISPR-associated protein Cas4; PFAM: protein of unknown function DUF83; KEGG: gme:Gmet_1070 hypothetical protein YP_002538856.1 KEGG: pca:Pcar_1093 hypothetical protein YP_002538857.1 TIGRFAM: CRISPR-associated protein, CT1132 family; CRISPR-associated protein, Csd2 family; PFAM: CRISPR-associated protein TM1801; KEGG: rfr:Rfer_3904 CRISPR-associated Csh2 family protein YP_002538858.1 TIGRFAM: CRISPR-associated protein, Csd1 family; PFAM: CRISPR-associated protein CT1133; KEGG: rfr:Rfer_3903 CRISPR-associated Csd1 family protein YP_002538859.1 TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; KEGG: rfr:Rfer_3902 CRISPR-associated Cas5d family protein YP_002538860.1 TIGRFAM: CRISPR-associated helicase Cas3; PFAM: helicase domain protein; DEAD/DEAH box helicase; KEGG: eba:ebA3291 CRISPR-associated helicase YP_002538861.1 PFAM: ATP-binding region ATPase domain protein; KEGG: gur:Gura_2728 histidine kinase YP_002538862.1 involved in the de novo synthesis of pyridoxine (Vitamin B6) YP_002538863.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate YP_002538864.1 KEGG: gur:Gura_2731 hypothetical protein YP_002538865.1 PFAM: protein of unknown function DUF147; KEGG: gur:Gura_2732 hypothetical protein YP_002538866.1 KEGG: gur:Gura_2733 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS YP_002538867.1 KEGG: gur:Gura_2734 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; ATPase AAA; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA YP_002538868.1 TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; KEGG: gur:Gura_2735 tRNA(Ile)-lysidine synthetase YP_002538869.1 KEGG: gur:Gura_1763 hypothetical protein YP_002538870.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: gur:Gura_1761 diguanylate cyclase YP_002538871.1 PFAM: NAD-dependent epimerase/dehydratase; TrkA-N domain protein; dTDP-4-dehydrorhamnose reductase; KEGG: gur:Gura_1760 NAD-dependent epimerase/dehydratase YP_002538872.1 PFAM: hypothetical protein; hypothetical protein; SMART: hypothetical protein; KEGG: gur:Gura_1759 hypothetical protein YP_002538873.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gbm:Gbem_3875 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_002538874.1 PFAM: protein of unknown function DUF362; KEGG: gsu:GSU2682 hypothetical protein YP_002538875.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate YP_002538876.1 PFAM: AMP-dependent synthetase and ligase; KEGG: ppd:Ppro_2870 AMP-dependent synthetase and ligase YP_002538877.1 PFAM: isochorismatase hydrolase; KEGG: gur:Gura_1739 isochorismatase hydrolase YP_002538878.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive YP_002538879.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate YP_002538880.1 catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis YP_002538881.1 involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water YP_002538882.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate YP_002538883.1 TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity YP_002538884.1 KEGG: gur:Gura_1731 anthranilate synthase component I; TIGRFAM: anthranilate synthase component I; PFAM: Anthranilate synthase component I domain protein; Chorismate binding-like YP_002538885.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Cache domain protein; KEGG: gur:Gura_1730 multi-sensor signal transduction histidine kinase YP_002538886.1 PFAM: Extracellular ligand-binding receptor; KEGG: gsu:GSU2389 ABC transporter, periplasmic substrate-binding protein YP_002538887.1 molecular chaperone YP_002538888.1 PFAM: Rubrerythrin; Rubredoxin-type Fe(Cys)4 protein; KEGG: gur:Gura_4153 rubrerythrin YP_002538889.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: gur:Gura_1722 cation diffusion facilitator family transporter YP_002538890.1 TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: gur:Gura_1721 single-stranded-DNA-specific exonuclease RecJ YP_002538891.1 PFAM: hypothetical protein; hypothetical protein; SMART: hypothetical protein; KEGG: gur:Gura_1720 hypothetical protein YP_002538892.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF YP_002538893.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane YP_002538894.1 TIGRFAM: preprotein translocase subunit YajC; PFAM: YajC family protein; KEGG: gur:Gura_1717 preprotein translocase subunit YajC YP_002538895.1 KEGG: gur:Gura_1716 queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylase, various specificities; queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase YP_002538896.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step YP_002538897.1 TIGRFAM: SpoIID/LytB domain protein; PFAM: Stage II sporulation D domain protein; KEGG: gur:Gura_1714 SpoIID/LytB domain-containing protein YP_002538898.1 KEGG: gur:Gura_1713 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: GAF domain protein; histidine kinase HAMP region domain protein; metal-dependent phosphohydrolase HD sub domain; Metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region YP_002538899.1 KEGG: gur:Gura_1712 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_002538900.1 KEGG: gur:Gura_1711 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_002538901.1 PFAM: regulatory protein ArsR; KEGG: gur:Gura_1710 regulatory protein, ArsR YP_002538902.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: gur:Gura_1709 peptidase U62, modulator of DNA gyrase YP_002538903.1 catalyzes the formation of N-acetyl-L-glutamate from acetyl-CoA and L-glutamate YP_002538904.1 TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: gur:Gura_1707 DNA repair protein RecN YP_002538905.1 PFAM: ATP-NAD/AcoX kinase; KEGG: gur:Gura_1706 ATP-NAD/AcoX kinase YP_002538906.1 KEGG: gur:Gura_1705 glycogen/starch/alpha-glucan phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35 YP_002538907.1 PFAM: ATPase AAA; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: gur:Gura_1704 recombination factor protein RarA YP_002538908.1 KEGG: gur:Gura_1703 6-phosphofructokinase; TIGRFAM: 6-phosphofructokinase; PFAM: phosphofructokinase YP_002538909.1 KEGG: gur:Gura_1161 hypothetical protein YP_002538910.1 PFAM: transglutaminase domain protein; KEGG: gur:Gura_3992 hypothetical protein YP_002538911.1 KEGG: noc:Noc_0584 extracellular solute-binding protein YP_002538912.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: gur:Gura_2849 hydrolase YP_002538913.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: gur:Gura_2850 HNH endonuclease YP_002538914.1 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids YP_002538915.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: gur:Gura_2852 phospholipid/glycerol acyltransferase YP_002538916.1 KEGG: gur:Gura_2853 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002538917.1 PFAM: radical SAM protein; KEGG: gur:Gura_2854 radical SAM domain-containing protein YP_002538918.1 KEGG: gur:Gura_2855 hypothetical protein YP_002538919.1 KEGG: gur:Gura_2856 glycosyltransferase-like protein YP_002538920.1 TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: gur:Gura_2857 rod shape-determining protein RodA YP_002538921.1 KEGG: gur:Gura_2858 peptidoglycan glycosyltransferase; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain YP_002538922.1 TIGRFAM: rod shape-determining protein MreD; KEGG: gur:Gura_2859 hypothetical protein YP_002538923.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall YP_002538924.1 KEGG: gur:Gura_2861 dTDP-4-dehydrorhamnose 3 5-epimerase and related enzymes-like protein YP_002538925.1 TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: gur:Gura_2862 glucose-1-phosphate thymidylyltransferase YP_002538926.1 TIGRFAM: D,D-heptose 1,7-bisphosphate phosphatase; histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Polynucleotide kinase 3 phosphatase central region; KEGG: gur:Gura_2863 D,D-heptose 1,7-bisphosphate phosphatase YP_002538927.1 catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate YP_002538928.1 PFAM: glycosyl transferase family 2; KEGG: gur:Gura_2865 glycosyl transferase family protein YP_002538929.1 TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell division protein FtsA; cell shape determining protein MreB/Mrl; KEGG: gur:Gura_2866 cell shape determining protein MreB YP_002538930.1 KEGG: gur:Gura_2867 hypothetical protein YP_002538931.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase YP_002538932.1 PFAM: protein of unknown function DUF255; KEGG: gur:Gura_2283 hypothetical protein YP_002538933.1 KEGG: gur:Gura_2892 hypothetical protein YP_002538934.1 KEGG: gur:Gura_2893 hypothetical protein YP_002538935.1 PFAM: hypothetical protein; hypothetical protein; SMART: hypothetical protein; KEGG: gur:Gura_2904 hypothetical protein YP_002538936.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; GAF domain protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: gur:Gura_2905 GAF sensor protein YP_002538937.1 KEGG: gur:Gura_2906 LemA family protein YP_002538938.1 biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate YP_002538939.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: gur:Gura_2908 PpiC-type peptidyl-prolyl cis-trans isomerase YP_002538940.1 PFAM: Ferritin Dps family protein; KEGG: gur:Gura_2910 ferroxidase YP_002538941.1 PFAM: band 7 protein; KEGG: gur:Gura_2912 band 7 protein YP_002538942.1 PFAM: protein of unknown function DUF107; KEGG: gur:Gura_2913 hypothetical protein YP_002538943.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: ATPase AAA; KEGG: gur:Gura_2914 two component, sigma-54 specific, fis family transcriptional regulator YP_002538944.1 TIGRFAM: redox-active disulfide protein 2; KEGG: gur:Gura_0436 redox-active disulfide protein 2 YP_002538945.1 PFAM: Thioredoxin domain; KEGG: gur:Gura_0435 thioredoxin domain-containing protein YP_002538946.1 PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: ppd:Ppro_0854 cytochrome c biogenesis protein, transmembrane region YP_002538947.1 PFAM: response regulator receiver; KEGG: gme:Gmet_3472 response regulator receiver domain-containing protein YP_002538948.1 PFAM: type II secretion system protein E; response regulator receiver; General secretory system II protein E domain protein; KEGG: gme:Gmet_3473 response regulator receiver domain-containing protein YP_002538949.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gme:Gmet_3474 histidine kinase YP_002538950.1 KEGG: gme:Gmet_3475 hypothetical protein YP_002538951.1 PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: gme:Gmet_3476 response regulator receiver modulated metal dependent phosphohydrolase YP_002538952.1 KEGG: gur:Gura_4027 response regulator receiver modulated metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_002538953.1 PFAM: response regulator receiver; PAS fold-4 domain protein; KEGG: gme:Gmet_3477 PAS/PAC sensor hybrid histidine kinase YP_002538954.1 KEGG: gme:Gmet_3477 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Cache domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002538955.1 PFAM: response regulator receiver; KEGG: gme:Gmet_2431 response regulator receiver domain-containing protein YP_002538956.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: gme:Gmet_3477 PAS/PAC sensor hybrid histidine kinase YP_002538957.1 PFAM: Extracellular ligand-binding receptor; KEGG: amc:MADE_03165 extracellular ligand-binding receptor YP_002538958.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: glo:Glov_0053 MATE efflux family protein YP_002538959.1 PFAM: protein of unknown function DUF214; KEGG: tbd:Tbd_1412 hypothetical protein YP_002538960.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: pca:Pcar_0816 ABC-type transport system, ATPase component YP_002538961.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: tbd:Tbd_1414 secretion protein HlyD YP_002538962.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: tbd:Tbd_1415 RND efflux system outer membrane lipoprotein NodT YP_002538963.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ppd:Ppro_2228 two component transcriptional regulator YP_002538964.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ppd:Ppro_2227 integral membrane sensor signal transduction histidine kinase YP_002538965.1 KEGG: ppd:Ppro_2226 hypothetical protein YP_002538966.1 PFAM: thioesterase; KEGG: gur:Gura_2923 thioesterase YP_002538967.1 TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: gur:Gura_2925 phage SPO1 DNA polymerase-related protein YP_002538968.1 KEGG: gur:Gura_2926 hypothetical protein YP_002538969.1 KEGG: gur:Gura_2927 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein YP_002538970.1 PFAM: beta-lactamase domain protein; KEGG: gur:Gura_2928 beta-lactamase domain-containing protein YP_002538971.1 KEGG: gur:Gura_2929 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: nucleic acid binding OB-fold tRNA/helicase-type; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_002538972.1 PFAM: HI0933 family protein; FAD dependent oxidoreductase; KEGG: gur:Gura_2930 hypothetical protein YP_002538973.1 PFAM: response regulator receiver; KEGG: gur:Gura_2931 response regulator receiver protein YP_002538974.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gur:Gura_2932 response regulator receiver sensor signal transduction histidine kinase YP_002538975.1 PFAM: UspA domain protein; KEGG: gur:Gura_2933 UspA domain-containing protein YP_002538976.1 PFAM: response regulator receiver; KEGG: gur:Gura_2934 response regulator receiver protein YP_002538977.1 PFAM: GAF domain protein; KEGG: gur:Gura_2935 GAF sensor protein YP_002538978.1 SMART: helix-turn-helix domain protein; KEGG: gur:Gura_2936 helix-turn-helix domain-containing protein YP_002538979.1 PFAM: hypothetical protein; hypothetical protein; SMART: hypothetical protein; KEGG: gur:Gura_2937 hypothetical protein YP_002538980.1 PFAM: PfkB domain protein; KEGG: gur:Gura_2938 ribokinase-like domain-containing protein YP_002538981.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins YP_002538982.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; KEGG: gur:Gura_2942 RluA family pseudouridine synthase YP_002538983.1 KEGG: ppd:Ppro_2838 protein-L-isoaspartate O-methyltransferase; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_002538984.1 PFAM: protein of unknown function DUF355; KEGG: ppd:Ppro_2837 hypothetical protein YP_002538985.1 KEGG: gur:Gura_1614 hypothetical protein YP_002538986.1 KEGG: gur:Gura_1582 methylthioadenosine phosphorylase; TIGRFAM: methylthioadenosine phosphorylase; PFAM: purine or other phosphorylase family 1 YP_002538987.1 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance YP_002538988.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate YP_002538989.1 PFAM: Aldehyde Dehydrogenase; KEGG: gur:Gura_1578 aldehyde dehydrogenase YP_002538990.1 PFAM: AMMECR1 domain protein; KEGG: gur:Gura_1577 AMMECR1 domain-containing protein YP_002538991.1 PFAM: Citrate synthase; KEGG: gur:Gura_1576 type I citrate synthase YP_002538992.1 PFAM: creatinase; peptidase M24; KEGG: gur:Gura_1575 creatinase YP_002538993.1 KEGG: gur:Gura_1574 hypothetical protein YP_002538994.1 PFAM: AMP-dependent synthetase and ligase; KEGG: gme:Gmet_2692 acyl-CoA synthetase YP_002538995.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: gsu:GSU1102 DNA-binding response regulator YP_002538996.1 KEGG: gur:Gura_1571 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002538997.1 PFAM: response regulator receiver; KEGG: gur:Gura_1641 response regulator receiver protein YP_002538998.1 KEGG: gur:Gura_1639 hypothetical protein YP_002538999.1 KEGG: gur:Gura_1638 hypothetical protein YP_002539000.1 PFAM: Rhomboid family protein; KEGG: gur:Gura_1637 rhomboid family protein YP_002539001.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: glo:Glov_2625 metal dependent phosphohydrolase YP_002539002.1 PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: gur:Gura_1636 peptidase M1, membrane alanine aminopeptidase YP_002539003.1 KEGG: gme:Gmet_1095 rubrerythrin YP_002539004.1 PFAM: type IV pilus assembly PilZ; KEGG: gbm:Gbem_0376 type IV pilus assembly PilZ YP_002539005.1 PFAM: ATP-binding region ATPase domain protein; KEGG: gbm:Gbem_3366 histidine kinase YP_002539006.1 KEGG: bph:Bphy_1143 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002539007.1 KEGG: amr:AM1_5897 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002539008.1 PFAM: response regulator receiver; KEGG: ppd:Ppro_1879 PAS/PAC sensor hybrid histidine kinase YP_002539009.1 KEGG: gur:Gura_4378 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002539010.1 PFAM: KaiB domain protein; KEGG: mma:MM_1092 thiol-disulfide isomerase YP_002539011.1 PFAM: KaiB domain protein; KEGG: mma:MM_1091 thiol-disulfide isomerase YP_002539012.1 acts as a promotor non-specific transcription repressor YP_002539013.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; KEGG: gme:Gmet_2790 response regulator receiver sensor signal transduction histidine kinase YP_002539014.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gur:Gura_0344 multi-sensor signal transduction histidine kinase YP_002539015.1 KEGG: mac:MA1270 sensory transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002539016.1 PFAM: response regulator receiver; KEGG: amr:AM1_0285 two-component hybrid histidine kinase sensor and regulator YP_002539017.1 PFAM: response regulator receiver; KEGG: rru:Rru_A1654 response regulator receiver domain-containing protein YP_002539018.1 KEGG: mag:amb2980 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; GAF domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002539019.1 PFAM: multicopper oxidase type 2; KEGG: gsu:GSU2657 spore coat protein A YP_002539021.1 PFAM: Fibronectin type III domain protein; multicopper oxidase type 2; KEGG: afw:Anae109_3108 multicopper oxidase type 2 YP_002539023.1 TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein; KEGG: gur:Gura_1631 bacterioferritin YP_002539024.1 KEGG: gur:Gura_1630 hypothetical protein YP_002539025.1 KEGG: gur:Gura_1627 hypothetical protein YP_002539026.1 PFAM: diacylglycerol kinase catalytic region; KEGG: gur:Gura_1626 diacylglycerol kinase, catalytic region YP_002539027.1 PFAM: sulfatase; KEGG: gur:Gura_1625 sulfatase YP_002539028.1 TIGRFAM: peptide methionine sulfoxide reductase; PFAM: methionine sulfoxide reductase A; KEGG: gur:Gura_1749 peptide methionine sulfoxide reductase YP_002539029.1 PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: ATPase AAA; KEGG: gbm:Gbem_0904 type II secretion system protein E YP_002539030.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr) YP_002539031.1 PFAM: metallophosphoesterase; KEGG: gur:Gura_1101 metallophosphoesterase YP_002539032.1 protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP YP_002539033.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: gur:Gura_1099 5-formyltetrahydrofolate cyclo-ligase YP_002539035.1 KEGG: gur:Gura_1098 hypothetical protein YP_002539036.1 PFAM: protein of unknown function DUF904; KEGG: gur:Gura_1097 hypothetical protein YP_002539037.1 KEGG: gur:Gura_1096 signal recognition particle-docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: ATPase AAA YP_002539038.1 PFAM: Roadblock/LC7 family protein; KEGG: gur:Gura_1095 roadblock/LC7 family protein YP_002539039.1 TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; KEGG: gur:Gura_1094 chromosome segregation protein SMC YP_002539040.1 is a component of the macrolide binding site in the peptidyl transferase center YP_002539041.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme YP_002539042.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination YP_002539043.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3 YP_002539044.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA YP_002539045.1 TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: gur:Gura_1088 methionine aminopeptidase, type I YP_002539046.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP YP_002539047.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase YP_002539048.1 late assembly protein YP_002539049.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7 YP_002539050.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance YP_002539051.1 binds 5S rRNA along with protein L5 and L25 YP_002539052.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance YP_002539053.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit YP_002539054.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif YP_002539055.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13 YP_002539056.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel YP_002539057.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase YP_002539058.1 primary binding protein; helps mediate assembly; involved in translation fidelity YP_002539059.1 PFAM: ribosomal protein L29; KEGG: gbm:Gbem_0941 ribosomal protein L29 YP_002539060.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e YP_002539061.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation YP_002539062.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center YP_002539063.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA YP_002539064.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation YP_002539065.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel YP_002539066.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA YP_002539067.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin YP_002539068.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex YP_002539069.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu YP_002539070.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene YP_002539071.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit YP_002539072.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance YP_002539073.1 KEGG: gur:Gura_1062 DNA-directed RNA polymerase subunit beta'; TIGRFAM: DNA-directed RNA polymerase subunit beta'; PFAM: RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 1; RNA polymerase Rpb1 domain 5; RNA polymerase Rpb1 domain 4; SMART: RNA polymerase I subunit A domain protein YP_002539074.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme YP_002539075.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors YP_002539076.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit YP_002539077.1 in Escherichia coli and methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA YP_002539078.1 binds directly to 23S ribosomal RNA YP_002539079.1 TIGRFAM: transcription termination/antitermination factor NusG; PFAM: KOW domain protein; NGN domain protein; KEGG: gur:Gura_1056 NusG antitermination factor YP_002539080.1 forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force YP_002539081.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group have the CXXC motif YP_002539082.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu YP_002539083.1 PFAM: radical SAM protein; radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: gur:Gura_1052 radical SAM domain-containing protein YP_002539084.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate YP_002539085.1 forms a direct contact with the tRNA during translation YP_002539086.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit YP_002539087.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability YP_002539088.1 part of a two-component regulatory system with CreB or PhoB; involved in catabolic regulation YP_002539089.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sfu:Sfum_2656 two component transcriptional regulator, winged helix family YP_002539090.1 PFAM: sugar transferase; KEGG: lic:LIC10331 sugar transferase YP_002539091.1 PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: aba:Acid345_3135 Fe-S protein, radical SAM family YP_002539092.1 PFAM: von Willebrand factor A; Vault protein inter-alpha-trypsin domain protein; SMART: Vault protein inter-alpha-trypsin, metazoa; KEGG: sat:SYN_02036 von Willebrand factor A domain-containing protein YP_002539093.1 KEGG: gur:Gura_1047 aspartate-semialdehyde dehydrogenase; TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region YP_002539094.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde YP_002539095.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis YP_002539096.1 member of metallo-beta-lactamase family; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions YP_002539097.1 PFAM: General secretory system II protein E domain protein; KEGG: gur:Gura_1037 general secretion pathway protein E YP_002539098.1 KEGG: gur:Gura_1035 hypothetical protein YP_002539099.1 PFAM: Aldehyde Dehydrogenase; KEGG: gur:Gura_1033 aldehyde dehydrogenase YP_002539100.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene YP_002539101.1 TIGRFAM: hopanoid biosynthesis associated glycosyl transferase protein HpnI; KEGG: gur:Gura_1031 ceramide glucosyltransferase YP_002539102.1 PFAM: rRNA methylase; KEGG: gur:Gura_1022 rRNA methylase YP_002539103.1 TIGRFAM: hopanoid biosynthesis associated RND transporter like protein HpnN; KEGG: gur:Gura_1021 RND efflux transporter YP_002539104.1 KEGG: gur:Gura_1020 squalene-hopene cyclase; TIGRFAM: squalene/oxidosqualene cyclase; squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase YP_002539105.1 TIGRFAM: hopanoid-associated sugar epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; Male sterility domain; KR domain protein; KEGG: gur:Gura_1019 NAD-dependent epimerase/dehydratase YP_002539106.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate YP_002539107.1 TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnH; PFAM: radical SAM protein; KEGG: gur:Gura_1017 radical SAM domain-containing protein YP_002539108.1 PFAM: protein of unknown function DUF1568; KEGG: gsu:GSU0167 hypothetical protein YP_002539109.1 KEGG: gur:Gura_1472 YD repeat-containing protein YP_002539110.1 PFAM: Abortive infection protein; KEGG: cbe:Cbei_4810 abortive infection protein YP_002539111.1 TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; KEGG: sdn:Sden_2443 YD repeat-containing protein YP_002539113.1 TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; KEGG: sdn:Sden_2443 YD repeat-containing protein YP_002539114.1 PFAM: Abortive infection protein; KEGG: oih:OB3317 hypothetical protein YP_002539115.1 PFAM: protein of unknown function DUF1568; KEGG: gur:Gura_0845 hypothetical protein YP_002539117.1 PFAM: YD repeat-containing protein; KEGG: see:SNSL254_p_0173 rhs family protein YP_002539118.1 KEGG:. YP_002539120.1 KEGG: SMCP; sperm mitochondria-associated cysteine-rich protein YP_002539121.1 SMART: Parallel beta-helix repeat; KEGG: bpm:BURPS1710b_A0459 haemagluttinin family protein YP_002539122.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source YP_002539123.1 forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis YP_002539124.1 KEGG: gur:Gura_0123 hypothetical protein YP_002539125.1 PFAM: cobalamin B12-binding domain protein; radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: gur:Gura_0124 radical SAM domain-containing protein YP_002539126.1 KEGG: gur:Gura_0125 hypothetical protein YP_002539127.1 KEGG: gur:Gura_3321 molybdate ABC transporter, ATPase subunit; TIGRFAM: molybdate ABC transporter, ATPase subunit; PFAM: ABC transporter; TOBE domain protein; SMART: ATPase AAA YP_002539128.1 TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gur:Gura_3322 molybdate ABC transporter, inner membrane subunit YP_002539129.1 TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: gur:Gura_3323 molybdenum ABC transporter, periplasmic molybdate-binding protein YP_002539130.1 PFAM: SNARE associated Golgi protein; KEGG: gur:Gura_3750 hypothetical protein YP_002539131.1 KEGG: gur:Gura_2172 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002539132.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: gme:Gmet_1082 two component, sigma54 specific, Fis family transcriptional regulator YP_002539133.1 KEGG: gme:Gmet_1081 hypothetical protein YP_002539134.1 PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: gme:Gmet_1080 chemotaxis protein CheA YP_002539135.1 PFAM: CheW domain protein; KEGG: gur:Gura_2168 chemotaxis protein CheW YP_002539136.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: gbm:Gbem_1044 methyl-accepting chemotaxis sensory transducer YP_002539137.1 PFAM: MCP methyltransferase CheR-type; KEGG: gme:Gmet_1077 MCP methyltransferase, CheR-type YP_002539138.1 regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins YP_002539139.1 PFAM: response regulator receiver; KEGG: gbm:Gbem_1038 response regulator receiver protein YP_002539140.1 KEGG: gur:Gura_3377 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: PAS domain containing protein YP_002539141.1 PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gur:Gura_0128 GAF sensor signal transduction histidine kinase YP_002539142.1 TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: gur:Gura_0129 TraR/DksA family transcriptional regulator YP_002539143.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents YP_002539144.1 PFAM: PBS lyase HEAT domain protein repeat-containing protein; KEGG: gur:Gura_0131 heat repeat-containing PBS lyase YP_002539145.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: gur:Gura_0132 metal dependent phosphohydrolase YP_002539146.1 PFAM: PBS lyase HEAT domain protein repeat-containing protein; KEGG: gur:Gura_0133 heat repeat-containing PBS lyase YP_002539147.1 KEGG: gur:Gura_0134 hypothetical protein YP_002539148.1 KEGG: gur:Gura_0135 3-oxoacyl-(acyl-carrier-protein) synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YP_002539149.1 PFAM: MCP methyltransferase CheR-type; KEGG: gur:Gura_0136 hypothetical protein YP_002539150.1 KEGG: gur:Gura_0137 hypothetical protein YP_002539151.1 KEGG: gur:Gura_0140 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; DEAD/DEAH box helicase; SMART: DEAD/DEAH box helicases YP_002539152.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: gur:Gura_0141 PpiC-type peptidyl-prolyl cis-trans isomerase YP_002539153.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: gur:Gura_0142 PpiC-type peptidyl-prolyl cis-trans isomerase YP_002539154.1 PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: gur:Gura_0143 chaperone DnaJ domain-containing protein YP_002539155.1 KEGG: gur:Gura_0144 protoporphyrinogen oxidase; TIGRFAM: protoporphyrinogen oxidase; PFAM: amine oxidase; FAD dependent oxidoreductase YP_002539156.1 TIGRFAM: MJ0042 family finger-like protein; KEGG: gur:Gura_3397 zinc finger-domain-containing protein YP_002539157.1 KEGG: gur:Gura_3422 hypothetical protein YP_002539158.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: glo:Glov_0869 oxidoreductase FAD/NAD(P)-binding domain protein YP_002539159.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gur:Gura_3586 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002539160.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gur:Gura_3585 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002539161.1 PFAM: methyl-viologen-reducing hydrogenase delta subunit; KEGG: glo:Glov_0865 methyl-viologen-reducing hydrogenase delta subunit YP_002539162.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; FAD dependent oxidoreductase; KEGG: gme:Gmet_3426 heterodisulfide reductase subunit YP_002539163.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: gur:Gura_3582 CoB--CoM heterodisulfide reductase YP_002539164.1 KEGG: glo:Glov_0861 heterodisulfide reductase subunit YP_002539165.1 PFAM: ABC transporter transmembrane region; ABC transporter; SMART: ATPase AAA; KEGG: gur:Gura_0159 ABC transporter YP_002539166.1 PFAM: ABC transporter transmembrane region; ABC transporter; SMART: ATPase AAA; KEGG: gur:Gura_0160 ABC transporter YP_002539167.1 PFAM: APHP domain protein; KEGG: gur:Gura_3846 YVTN beta-propeller repeat-containing protein YP_002539168.1 TIGRFAM: selenocysteine-specific translation elongation factor; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 2; Elongation factor SelB winged helix 3; KEGG: gur:Gura_0164 selenocysteine-specific translation elongation factor YP_002539169.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: gur:Gura_0165 methyl-accepting chemotaxis sensory transducer YP_002539170.1 PFAM: response regulator receiver; KEGG: gur:Gura_0166 response regulator receiver protein YP_002539171.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; KEGG: gme:Gmet_1036 molybdopterin adenylyltransferase YP_002539172.1 PFAM: Uracil-DNA glycosylase superfamily; KEGG: azo:azo3976 probable uracil-DNA glycosylase YP_002539173.1 KEGG: gur:Gura_2911 hypothetical protein YP_002539174.1 KEGG: gsu:GSU0915 hypothetical protein YP_002539175.1 KEGG: gur:Gura_2274 virion core protein (lumpy skin disease virus)-like protein YP_002539176.1 KEGG: gur:Gura_2275 hypothetical protein YP_002539177.1 PFAM: protein of unknown function DUF1653; KEGG: maq:Maqu_0057 hypothetical protein YP_002539178.1 TIGRFAM: cytochrome C family protein; PFAM: multihaem cytochrome; KEGG: gur:Gura_0077 cytochrome c family protein YP_002539179.1 TIGRFAM: cytochrome C family protein; PFAM: multihaem cytochrome; KEGG: gur:Gura_0076 cytochrome c family protein YP_002539180.1 TIGRFAM: cytochrome C family protein; PFAM: multihaem cytochrome; KEGG: gur:Gura_0075 cytochrome c family protein YP_002539181.1 KEGG: dar:Daro_3601 hypothetical protein YP_002539182.1 PFAM: ATPase AAA; SMART: ATPase AAA; KEGG: sde:Sde_1049 elongation factor P YP_002539183.1 KEGG: dar:Daro_3603 hypothetical protein YP_002539184.1 KEGG: sde:Sde_1047 hypothetical protein YP_002539185.1 KEGG: sde:Sde_1046 response regulator receiver (CheY-like) modulated diguanylate cyclase/phosphodiesterase (GGDEF and EAL domains) with PAS/PAC sensor(s) YP_002539186.1 KEGG: sde:Sde_1045 hypothetical protein YP_002539187.1 PFAM: GPW/gp25 family protein; KEGG: sde:Sde_1044 tail lysozyme YP_002539188.1 KEGG: dar:Daro_3608 PaaR YP_002539189.1 PFAM: Rhs element Vgr protein; KEGG: dar:Daro_3609 rhs element Vgr protein YP_002539190.1 KEGG: sde:Sde_1041 hypothetical protein YP_002539191.1 KEGG: dar:Daro_3611 hypothetical protein YP_002539192.1 TIGRFAM: conserved hypothetical protein; KEGG: sde:Sde_1040 phospholipid/glycerol acyltransferase YP_002539193.1 TIGRFAM: conserved hypothetical protein; KEGG: dar:Daro_3613 phage tail region protein YP_002539194.1 KEGG: dar:Daro_3614 phage tail sheath protein FI YP_002539195.1 KEGG: sde:Sde_1037 Smr protein/MutS2-like YP_002539196.1 KEGG: sde:Sde_1036 hypothetical protein YP_002539197.1 KEGG: gsu:GSU0719 hypothetical protein YP_002539198.1 PFAM: phosphofructokinase; KEGG: aba:Acid345_3032 6-phosphofructokinase YP_002539199.1 TIGRFAM: YidE/YbjL duplication; PFAM: TrkA-C domain protein; YidE/YbjL duplication domain protein; KEGG: gur:Gura_3636 YidE/YbjL duplication YP_002539200.1 KEGG: gur:Gura_4341 hypothetical protein YP_002539201.1 KEGG: gme:Gmet_1675 hypothetical protein YP_002539202.1 PFAM: Ig domain protein group 2 domain protein; KEGG: gbm:Gbem_2091 Ig domain protein group 2 domain protein YP_002539203.1 KEGG: ppd:Ppro_3651 lipoprotein YP_002539204.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: gsu:GSU3400 CzcA family heavy metal efflux protein YP_002539205.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: gsu:GSU3399 RND family efflux transporter MFP subunit YP_002539206.1 PFAM: outer membrane efflux protein; KEGG: gur:Gura_3362 outer membrane efflux protein YP_002539207.1 KEGG: bba:Bd0260 hypothetical protein YP_002539208.1 KEGG: gbm:Gbem_3370 hypothetical protein YP_002539209.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: gur:Gura_4401 methyl-accepting chemotaxis sensory transducer YP_002539210.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: gur:Gura_4400 MATE efflux family protein YP_002539211.1 KEGG: gur:Gura_4398 hypothetical protein YP_002539212.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: gur:Gura_4337 peptidase M20 YP_002539213.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gur:Gura_4336 GCN5-related N-acetyltransferase YP_002539214.1 PFAM: glycoside hydrolase 15-related; KEGG: noc:Noc_1617 glycoside hydrolase YP_002539216.1 KEGG: gsu:GSU0073 outer membrane protein YP_002539217.1 KEGG: fgenesh1_pg.C_scaffold_8000387. YP_002539218.1 PFAM: NUDIX hydrolase; KEGG: gme:Gmet_3309 NUDIX hydrolase YP_002539219.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gbm:Gbem_0524 integral membrane sensor signal transduction histidine kinase YP_002539220.1 KEGG: gme:Gmet_2956 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002539222.1 PFAM: legume lectin beta domain; KEGG: dar:Daro_1504 hypothetical protein YP_002539223.1 KEGG: eba:ebA849 hypothetical protein YP_002539224.1 PFAM: protein of unknown function DUF748; KEGG: gur:Gura_4334 hypothetical protein YP_002539226.1 PFAM: Rubrerythrin; KEGG: gsu:GSU2193 hypothetical protein YP_002539227.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: gme:Gmet_0779 PAS/PAC sensor signal transduction histidine kinase YP_002539228.1 PFAM: chemotaxis protein CheB; MCP methyltransferase CheR-type; PAS fold-4 domain protein; PAS fold domain protein; KEGG: gme:Gmet_0780 MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor YP_002539229.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: mag:amb3423 signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation YP_002539230.1 KEGG: bbt:BBta_2398 hypothetical protein; PFAM: KaiA binding; SMART: ATPase AAA YP_002539231.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: dps:DP0365 hypothetical protein YP_002539232.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: gur:Gura_4397 single-strand binding protein YP_002539233.1 KEGG: gme:Gmet_0139 hypothetical protein YP_002539234.1 KEGG: gme:Gmet_0588 hypothetical protein YP_002539235.1 KEGG: gbm:Gbem_2976 hypothetical protein YP_002539236.1 KEGG: gur:Gura_4396 1-acyl-sn-glycerol-3-phosphate acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase YP_002539237.1 KEGG: gur:Gura_4395 hypothetical protein YP_002539238.1 KEGG: gur:Gura_4394 hypothetical protein YP_002539239.1 PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: gur:Gura_4393 beta-lactamase domain-containing protein YP_002539240.1 PFAM: cell divisionFtsK/SpoIIIE; SMART: ATPase AAA; KEGG: gur:Gura_4392 cell divisionFtsK/SpoIIIE YP_002539241.1 PFAM: amino acid-binding ACT domain protein; KEGG: gur:Gura_4386 amino acid-binding ACT domain-containing protein YP_002539242.1 KEGG: gur:Gura_4385 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase YP_002539243.1 PFAM: cytochrome c assembly protein; KEGG: gur:Gura_4384 cytochrome c assembly protein YP_002539244.1 KEGG: gur:Gura_4383 hypothetical protein YP_002539245.1 TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: gbm:Gbem_1487 phosphonate ABC transporter, periplasmic phosphonate-binding protein YP_002539246.1 KEGG: sfu:Sfum_3741 PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002539247.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: gur:Gura_4382 peptidyl-prolyl cis-trans isomerase, cyclophilin type YP_002539248.1 PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: gur:Gura_4381 phosphoglucomutase YP_002539249.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: gur:Gura_4380 cold-shock DNA-binding domain-containing protein YP_002539250.1 TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter; KEGG: gur:Gura_4379 excinuclease ABC, A subunit YP_002539251.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: gur:Gura_4403 hypothetical protein YP_002539252.1 KEGG: gur:Gura_4404 hypothetical protein YP_002539253.1 KEGG: gur:Gura_4405 hypothetical protein YP_002539254.1 KEGG: gur:Gura_4406 1A family penicillin-binding protein; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_002539255.1 PFAM: histone family protein DNA-binding protein; KEGG: gur:Gura_4407 histone family protein DNA-binding protein YP_002539256.1 KEGG: gur:Gura_4408 hypothetical protein YP_002539257.1 KEGG: gur:Gura_4409 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta YP_002539258.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: gur:Gura_4410 NADH:flavin oxidoreductase/NADH oxidase YP_002539259.1 stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein YP_002539260.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: gur:Gura_4413 TatD family hydrolase YP_002539261.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: gur:Gura_4414 UBA/ThiF-type NAD/FAD binding protein YP_002539262.1 PFAM: Rubrerythrin; KEGG: gur:Gura_4415 rubrerythrin YP_002539263.1 KEGG: gur:Gura_4416 hypothetical protein YP_002539264.1 PFAM: Lytic transglycosylase catalytic; KEGG: gur:Gura_4417 lytic transglycosylase, catalytic YP_002539265.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: gur:Gura_4418 two component, sigma-54 specific, fis family transcriptional regulator YP_002539266.1 PFAM: CheW domain protein; KEGG: gur:Gura_4419 chemotaxis protein CheW YP_002539267.1 PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: gur:Gura_4420 chemotaxis protein CheA YP_002539268.1 PFAM: MCP methyltransferase CheR-type; KEGG: gur:Gura_4421 protein-glutamate O-methyltransferase YP_002539269.1 PFAM: metal-dependent phosphohydrolase HD sub domain; Metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region; KEGG: gur:Gura_4422 metal dependent phosphohydrolase YP_002539270.1 PFAM: chemotaxis protein CheB; response regulator receiver; KEGG: gur:Gura_4423 response regulator receiver modulated chemotaxis protein CheB YP_002539271.1 KEGG: gur:Gura_4424 hypothetical protein YP_002539272.1 KEGG: gur:Gura_4425 hypothetical protein YP_002539273.1 TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; methyltransferase type 11; KEGG: gsu:GSU3463 glucose-inhibited division protein B YP_002539274.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs YP_002539275.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE YP_002539276.1 TIGRFAM: YidC translocase/secretase; PFAM: 60 kDa inner membrane insertion protein; KEGG: gur:Gura_4429 60 kDa inner membrane insertion protein YP_002539277.1 protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates